HHsearch alignment for GI: 254780526 and conserved domain: PRK10046
>PRK10046 dpiA two-component response regulator DpiA; Provisional.
Probab=99.92 E-value=1.1e-24 Score=175.91 Aligned_cols=180 Identities=10% Similarity=0.115 Sum_probs=129.1
Q ss_pred EEEECCCHHHHHHHHHHHHH-CCCE-EEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHC-CCCCCEECC
Q ss_conf 68970989999999999997-8988-99982858999999828996799990078966217999863101-332100002
Q gi|254780526|r 2 FVLIDDRALVKDGYIALFGD-DGVS-LEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRA-HSQVPLIGI 78 (223)
Q Consensus 2 ILiVeDd~~~~~~l~~~L~~-~g~~-v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~-~~~~pII~l 78 (223)
T Consensus 7 VLIVEDd~~v~~~l~~~L~~~~gf~~V~~A~~~~eA~~~l~~~~pDLvLLDi~L--Pd~~Glell~~lr~~~~~~~VI~i 84 (225)
T PRK10046 7 LLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARMMIERFKPGLILLDNYL--PDGRGINLLHELVQAHYPGDVVFT 84 (225)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCEEEEECCC--CCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 999959899999999999728995499998999999999973599999982898--999799999999964879988999
Q ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCH
Q ss_conf 44321000011122201000102333332100000111222222211222222222222----22222223321242101
Q gi|254780526|r 79 SDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLKVSNNRAETGPIRVFSDG----RDPEVQGEVFPLPRRER 154 (223)
Q Consensus 79 t~~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lRr~~~~~~~~~~~~~~~~~~~----~~~~~~g~~i~LT~~E~ 154 (223)
T Consensus 85 TA~~d~~~~~~Al~~Ga~DYLvKPf~~erl~~~L~~y~~~~~~l~~~~~~~Q~~iD~~~~~~~~~~~~~~lpKGl~~~Tl 164 (225)
T PRK10046 85 TAASDMETVSEAVRCGVFDYLIKPIAYERLGQTLTRFRQRKHMLESIDSASQKQIDEMFNAYARGEPKDELPTGIDPLTL 164 (225)
T ss_pred ECCCCHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
T ss_conf 68999999999997499831028999999999999999999986357768999999996233568885658999998999
Q ss_pred -HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHH
Q ss_conf -234432112883400899998652876577766136
Q gi|254780526|r 155 -RILEYLMANRGKRVAKTQIFSAIYGLFDEAVEENVV 190 (223)
Q Consensus 155 -~lL~~L~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv 190 (223)
T Consensus 165 ~~v~~~l-~~~~~~~ta~eva~~~------giSrvTa 194 (225)
T PRK10046 165 NAVRKLF-KEPGVQHTAETVAQAL------TISRTTA 194 (225)
T ss_pred HHHHHHH-HCCCCCCCHHHHHHHH------CCCHHHH
T ss_conf 9999999-7179986899999985------8519999