HHsearch alignment for GI: 254780526 and conserved domain: PRK10153

>PRK10153 DNA-binding transcriptional activator CadC; Provisional.
Probab=99.33  E-value=3e-12  Score=97.62  Aligned_cols=98  Identities=18%  Similarity=0.223  Sum_probs=88.9

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf             21122222222222222222223321242101234432112883400899998652876577766136889999998601
Q gi|254780526|r  123 NNRAETGPIRVFSDGRDPEVQGEVFPLPRRERRILEYLMANRGKRVAKTQIFSAIYGLFDEAVEENVVESHISKLRKKLR  202 (223)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~g~~i~LT~~E~~lL~~L~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv~~~I~rLRkKL~  202 (223)
T Consensus         3 ~~~F~I~dWl~~p~ENkl~r~drev~iEpRLinLL~Fla~hpg~VfsRDELI~~VW~G--aIvTDQVVTQSIFELRKiLK   80 (512)
T PRK10153          3 QPVFRIGDWLLTPSENQLSRQDREVTLEPRLINLLVFLAQHSGEVFSRDELIDHVWDG--AIVTDQVVTQSIFELRKSLR   80 (512)
T ss_pred             CCEEEECCEEEECCCCEEEECCCEEEECHHHHHHHHHHHCCCCCEECHHHHHHHHCCC--CEECCCHHHHHHHHHHHHHH
T ss_conf             7669963579962667366669879864778999999851999534399999986278--74113025588999999986


Q ss_pred             CCC--CCCCEEEECCCCEEECC
Q ss_conf             456--77715778686303138
Q gi|254780526|r  203 NKL--GFDPVDSKRFLGYSIDW  222 (223)
Q Consensus       203 ~~~--~~~~I~tvrg~GY~l~~  222 (223)
T Consensus        81 dg~~~~~~YIvTVPKRGYKLvA  102 (512)
T PRK10153         81 DGREDNPEYIVTVPKRGYKLVA  102 (512)
T ss_pred             CCCCCCCCEEEEECCCCCEECC
T ss_conf             3886788729983688631246