HHsearch alignment for GI: 254780526 and conserved domain: PRK10188

>PRK10188 DNA-binding transcriptional activator SdiA; Provisional.
Probab=96.74  E-value=0.0017  Score=42.45  Aligned_cols=51  Identities=25%  Similarity=0.449  Sum_probs=43.9

Q ss_pred             CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf             3321242101234432112883400899998652876577766136889999998601456
Q gi|254780526|r  145 EVFPLPRRERRILEYLMANRGKRVAKTQIFSAIYGLFDEAVEENVVESHISKLRKKLRNKL  205 (223)
Q Consensus       145 ~~i~LT~~E~~lL~~L~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv~~~I~rLRkKL~~~~  205 (223)
T Consensus       176 ~~~~LT~RE~E~L~W~A~--GK--Ts~EIa~IL------~ISe~TV~fHl~na~~KL~a~N  226 (240)
T PRK10188        176 PEMNFSKREKEILKWTAE--GK--TSAEIAMIL------SISENTVNFHQKNMQKKFNAPN  226 (240)
T ss_pred             CCCCCCHHHHHHHHHHHC--CC--CHHHHHHHH------CCCHHHHHHHHHHHHHHHCCCC
T ss_conf             878899899999999977--99--999999883------9999999999999999958998