HHsearch alignment for GI: 254780526 and conserved domain: PRK10701

>PRK10701 DNA-binding transcriptional regulator RstA; Provisional.
Probab=100.00  E-value=0  Score=389.53  Aligned_cols=219  Identities=18%  Similarity=0.206  Sum_probs=202.1

Q ss_pred             EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEECCCCC
Q ss_conf             68970989999999999997898899982858999999828996799990078966217999863101332100002443
Q gi|254780526|r    2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRAHSQVPLIGISDY   81 (223)
Q Consensus         2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~~~~~pII~lt~~   81 (223)
T Consensus         4 ILlVEDd~~l~~~l~~~L~~~g~~v~~a~~g~~a~~~~~~~~~DlvilDi~L--P~~dG~~l~~~iR~~~~~PiI~lta~   81 (240)
T PRK10701          4 IVFVEDDAEVGSLIAAYLAKHDIDVTVEPRGDRAEETILREQPDLVLLDIML--PGKDGMTICRDLRPKWSGPIVLLTSL   81 (240)
T ss_pred             EEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCC--CCCCCCEEEEECCCCCCCCEEEEEEC
T ss_conf             9999799999999999998879999998999999999861799999992899--76788787631102589878999405


Q ss_pred             CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC-------------CCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             21000011122201000102333332100000111222222-------------21122222222222222222223321
Q gi|254780526|r   82 PSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLKVS-------------NNRAETGPIRVFSDGRDPEVQGEVFP  148 (223)
Q Consensus        82 ~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lRr~~~~-------------~~~~~~~~~~~~~~~~~~~~~g~~i~  148 (223)
T Consensus        82 ~~~~d~v~gl~~GADDYl~KPf~~~eL~aRi~a~lrr~~~~~~~~~~~~~~~~~~~~~~~g~l~ld~~~~~v~~~g~~i~  161 (240)
T PRK10701         82 DSDMNHILALEMGACDYILKTTPPAVLLARLRLHLRQNEQATQAKGLQETSLTPYKALHFGTLTIDPINRVVTLAGEEIS  161 (240)
T ss_pred             CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCEEEECCEEEE
T ss_conf             75788999997688776417998799999999999653254443222345557664389877999888899999999987


Q ss_pred             CCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCEEEECCCCEEECCC
Q ss_conf             242101234432112883400899998652876577766136889999998601456-777157786863031388
Q gi|254780526|r  149 LPRRERRILEYLMANRGKRVAKTQIFSAIYGLFDEAVEENVVESHISKLRKKLRNKL-GFDPVDSKRFLGYSIDWN  223 (223)
Q Consensus       149 LT~~E~~lL~~L~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv~~~I~rLRkKL~~~~-~~~~I~tvrg~GY~l~~n  223 (223)
T Consensus       162 LT~~E~~lL~~L~~~~g~vvsre~L~~~vwg~-~~~~~~rtvdv~I~rLRkKl~~~~~~~~~I~TvrG~GY~f~p~  236 (240)
T PRK10701        162 LSTADFELLWELATHAGQIMDRDALLKNLRGV-SYDGLDRSVDVAISRLRKKLLDNAAEPYRIKTVRNKGYLFAPH  236 (240)
T ss_pred             CCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEECCC
T ss_conf             67899999999997799873899999985398-8788867899999999998752889998399981818518577