HHsearch alignment for GI: 254780526 and conserved domain: PRK10766
>PRK10766 DNA-binding transcriptional regulator TorR; Provisional.
Probab=100.00 E-value=0 Score=351.86 Aligned_cols=207 Identities=21% Similarity=0.287 Sum_probs=192.6
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEECCCCC
Q ss_conf 68970989999999999997898899982858999999828996799990078966217999863101332100002443
Q gi|254780526|r 2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRAHSQVPLIGISDY 81 (223)
Q Consensus 2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~~~~~pII~lt~~ 81 (223)
T Consensus 5 ILlVEDD~~l~~~l~~~L~~~g~~V~~~~~~~~a~~~l~~~~~DlvilDi~l--p~~~G~el~~~iR~~~~~piI~lta~ 82 (224)
T PRK10766 5 ILVVEDEPVTRARLQGYFEQEGYRVSEAASGAGMREIMQNQHVDLILLDINL--PGEDGLMLTRELRSRSTVGIILVTGR 82 (224)
T ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCC--CCCCCCCHHHHHHHCCCCCEEEECCC
T ss_conf 9999199999999999999879999998999999999960899999988999--98876613767630478556863355
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC-------------CCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 210000111222010001023333321000001112222-------------2221122222222222222222223321
Q gi|254780526|r 82 PSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLK-------------VSNNRAETGPIRVFSDGRDPEVQGEVFP 148 (223)
Q Consensus 82 ~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lRr~~-------------~~~~~~~~~~~~~~~~~~~~~~~g~~i~ 148 (223)
T Consensus 83 ~~~~~~i~al~~GaddYl~KPf~~~eL~ari~allrR~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~i~ 162 (224)
T PRK10766 83 TDSIDRIVGLEMGADDYVTKPFELRELLVRVKNLLWRISLARQAQAVAEQPETQDNCYRFAGYCLNVNRRTLERNGEPIK 162 (224)
T ss_pred CCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEECCCCEEEECCEEEE
T ss_conf 89899999998494145139998899999999997252442112112346677787699999999888889998999986
Q ss_pred CCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECC
Q ss_conf 2421012344321128834008999986528765777661368899999986014567771577868
Q gi|254780526|r 149 LPRRERRILEYLMANRGKRVAKTQIFSAIYGLFDEAVEENVVESHISKLRKKLRNKLGFDPVDSKRF 215 (223)
Q Consensus 149 LT~~E~~lL~~L~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv~~~I~rLRkKL~~~~~~~~I~tvrg 215 (223)
T Consensus 163 LT~~E~~lL~~L~~~~g~vvsre~L~~~vw~~-~~~~~~~sid~~I~rLRkKl~----~~~I~tv~G 224 (224)
T PRK10766 163 LTKAEYELLVAFVTNPGQVLSRERLLRMLSHR-VEDPNDRTIDVLIRRLRHKLN----PDLFVTVHG 224 (224)
T ss_pred CCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC-CCCCCCCHHHHHHHHHHHHCC----CCCEEECCC
T ss_conf 78999999999996799739699999996488-878884729999999997679----886794989