HHsearch alignment for GI: 254780526 and conserved domain: PRK10841
>PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional.
Probab=99.85 E-value=2.8e-21 Score=154.54 Aligned_cols=112 Identities=15% Similarity=0.198 Sum_probs=101.4
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCC-CCCCEECCCC
Q ss_conf 689709899999999999978988999828589999998289967999900789662179998631013-3210000244
Q gi|254780526|r 2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRAH-SQVPLIGISD 80 (223)
Q Consensus 2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~~-~~~pII~lt~ 80 (223)
T Consensus 827 ILVVEDNpINq~VL~~~L~~LG~~V~~A~NG~EALe~l~~~~fDLILMDI--qMPvMDGyEaTr~IRe~~~~iPIIALTA 904 (947)
T PRK10841 827 ILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNHIDIVLSDV--NMPNMDGYRLTQRIRQLGLTLPVIGVTA 904 (947)
T ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEECC--CCCCCCHHHHHHHHHCCCCCCEEEEEEC
T ss_conf 99990789999999999997699999989999999997569989899708--8899809999999980898494999938
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 32100001112220100010233333210000011
Q gi|254780526|r 81 YPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAI 115 (223)
Q Consensus 81 ~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~ 115 (223)
T Consensus 905 nA~~edkerCleAGMDdyLsKPV~l~~L~~vL~~Y 939 (947)
T PRK10841 905 NALAEEKQRCLEAGMDSCLSKPVTLDVLKQTLTVY 939 (947)
T ss_pred CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
T ss_conf 99989999999879999997989799999999999