HHsearch alignment for GI: 254780526 and conserved domain: PRK10923
>PRK10923 glnG nitrogen regulation protein NR(I); Provisional.
Probab=99.91 E-value=2.2e-24 Score=174.02 Aligned_cols=113 Identities=19% Similarity=0.209 Sum_probs=105.2
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHC-CCCCCEECCCC
Q ss_conf 68970989999999999997898899982858999999828996799990078966217999863101-33210000244
Q gi|254780526|r 2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRA-HSQVPLIGISD 80 (223)
Q Consensus 2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~-~~~~pII~lt~ 80 (223)
T Consensus 6 ILiVDDd~~~r~~l~~~L~~~g~~v~~a~~~~~al~~l~~~~~dlvl~Di~--mP~~~Gl~ll~~lr~~~~~~pvIviT~ 83 (469)
T PRK10923 6 VWVVDDDSSIRWVLERALAGAGLTCTTFENGNEVLEALASKTPDVLLSDIR--MPGMDGLALLKQIKQRHPMLPVIIMTA 83 (469)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEECCC--CCCCCHHHHHHHHHHCCCCCCEEEEEC
T ss_conf 999949899999999999877998999899999999986699999987899--999899999999984298997899989
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 321000011122201000102333332100000111
Q gi|254780526|r 81 YPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIY 116 (223)
Q Consensus 81 ~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~l 116 (223)
T Consensus 84 ~~~~~~av~A~~~GA~dyL~KP~~~~~L~~~v~ral 119 (469)
T PRK10923 84 HSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAI 119 (469)
T ss_pred CCCHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 999899999985570443008899999999999999