HHsearch alignment for GI: 254780526 and conserved domain: PRK11107

>PRK11107 hybrid sensory histidine kinase BarA; Provisional.
Probab=99.86  E-value=2e-21  Score=155.44  Aligned_cols=113  Identities=16%  Similarity=0.133  Sum_probs=102.6

Q ss_pred             EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCC---CCCCEECC
Q ss_conf             689709899999999999978988999828589999998289967999900789662179998631013---32100002
Q gi|254780526|r    2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRAH---SQVPLIGI   78 (223)
Q Consensus         2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~~---~~~pII~l   78 (223)
T Consensus       671 VLvVEDN~iN~~vi~~lL~~lG~~v~~A~nG~eAle~~~~~~fDLILMDiq--MP~MDG~eATr~IR~~~~~~~~PIIAl  748 (920)
T PRK11107        671 VMAVDDNPANLKLIGALLEEQVEHVVLCDSGHQAVELAKQRPFDLIFMDIQ--MPGMDGIRACELIRQLPHNQNTPIIAV  748 (920)
T ss_pred             EEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEECCC--CCCCCHHHHHHHHHHCCCCCCCEEEEE
T ss_conf             999848899999999999984988999899999999974799978998899--999989999999981867898959999


Q ss_pred             CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf             44321000011122201000102333332100000111
Q gi|254780526|r   79 SDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIY  116 (223)
Q Consensus        79 t~~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~l  116 (223)
T Consensus       749 TA~a~~~dre~cl~aGMddyLtKPI~~~~L~~~L~~~~  786 (920)
T PRK11107        749 TAHAMAGERERLLGAGMDDYLAKPIDEAALKQVLLRWK  786 (920)
T ss_pred             ECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHC
T ss_conf             79989899999997799938728799999999999867