HHsearch alignment for GI: 254780526 and conserved domain: PRK13870
>PRK13870 transcriptional regulator TraR; Provisional.
Probab=96.44 E-value=0.0039 Score=40.23 Aligned_cols=51 Identities=18% Similarity=0.227 Sum_probs=43.3
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 3321242101234432112883400899998652876577766136889999998601456
Q gi|254780526|r 145 EVFPLPRRERRILEYLMANRGKRVAKTQIFSAIYGLFDEAVEENVVESHISKLRKKLRNKL 205 (223)
Q Consensus 145 ~~i~LT~~E~~lL~~L~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv~~~I~rLRkKL~~~~ 205 (223)
T Consensus 170 ~~~~LT~RE~E~L~W~A~--GK--T~~EIA~IL------gISe~TV~fHl~na~~KL~a~n 220 (234)
T PRK13870 170 DAAWLDPKEATYLRWIAV--GM--TMEEIADVE------GVKYNSVRVKLREAMKRFDVRS 220 (234)
T ss_pred CCCCCCHHHHHHHHHHHC--CC--CHHHHHHHH------CCCHHHHHHHHHHHHHHHCCCC
T ss_conf 766799799999999978--99--899999997------9889999999999999958998