HHsearch alignment for GI: 254780526 and conserved domain: smart00862

>smart00862 Trans_reg_C Transcriptional regulatory protein, C terminal. This domain is almost always found associated with the response regulator receiver domain. It may play a role in DNA binding.

Probab=99.64  E-value=2.9e-16  Score=122.91  Aligned_cols=77  Identities=35%  Similarity=0.615  Sum_probs=68.1

Q ss_pred             CCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCEEEECCCCEEE
Q ss_conf             23321242101234432112883400899998652876577766136889999998601456-777157786863031
Q gi|254780526|r  144 GEVFPLPRRERRILEYLMANRGKRVAKTQIFSAIYGLFDEAVEENVVESHISKLRKKLRNKL-GFDPVDSKRFLGYSI  220 (223)
Q Consensus       144 g~~i~LT~~E~~lL~~L~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv~~~I~rLRkKL~~~~-~~~~I~tvrg~GY~l  220 (223)
T Consensus         1 g~~v~Lt~~e~~lL~~L~~~~~~~vs~~~l~~~lw~~~~~~~~~~~l~~~I~~LR~kl~~~~~~~~~i~t~~g~GY~l   78 (78)
T smart00862        1 GEPIKLTPKEFRLLELLLRNPGRVVSREELLEAVWGDDDDDVDDNTLDVHISRLRKKLEDDGANPRLIETVRGVGYRL   78 (78)
T ss_pred             CCEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
T ss_conf             957324899999999998479962969999987628887888860278999999999764589999599837956449