HHsearch results for GI: 254780526 and protein with PDBid: 1p2f_A
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1
Probab=100.00 E-value=0 Score=325.34 Aligned_cols=211 Identities=22% Similarity=0.316 Sum_probs=189.9
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHC-CCCCCEECCCC
Q ss_conf 68970989999999999997898899982858999999828996799990078966217999863101-33210000244
Q gi|254780526|r 2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRA-HSQVPLIGISD 80 (223)
Q Consensus 2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~-~~~~pII~lt~ 80 (223)
|||||||+.+++.++..|+..|+ |.++.+++++ +...+.||++++|+.+ |+++|+++++.+++ .+++|||++|+
T Consensus 5 ILiVdDd~~~~~~l~~~L~~~g~-v~~~~~~~ea--l~~~~~~DlvilD~~l--p~~~g~~~~~~~~~~~~~~~iiilt~ 79 (220)
T 1p2f_A 5 IAVVDDDKNILKKVSEKLQQLGR-VKTFLTGEDF--LNDEEAFHVVVLDVML--PDYSGYEICRMIKETRPETWVILLTL 79 (220)
T ss_dssp EEEECSCHHHHHHHHHHHTTTEE-EEEESSHHHH--HHCCSCCSEEEEESBC--SSSBHHHHHHHHHHHCTTSEEEEEES
T ss_pred EEEEECCHHHHHHHHHHHHHCCE-EEEECCHHHH--HHHCCCCCEEEEECCC--CCCCCCHHHHHHHHCCCCEEEEECCC
T ss_conf 99995989999999999986999-9998799999--9527899999997999--98886023332110244203430122
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 32100001112220100010233333210000011122222221122222222222222222223321242101234432
Q gi|254780526|r 81 YPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLKVSNNRAETGPIRVFSDGRDPEVQGEVFPLPRRERRILEYL 160 (223)
Q Consensus 81 ~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lRr~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~LT~~E~~lL~~L 160 (223)
..+.+++++++++|||||+.|||+++||.+||++++||.+ ....+.|++.+|...++++++|+.+.||++||+||++|
T Consensus 80 ~~~~~~~~~~~~~gaddyl~KP~~~~eL~~ri~~~l~r~~--~~~~~~~~~~ld~~~~~~~~~g~~v~LT~~E~~iL~~L 157 (220)
T 1p2f_A 80 LSDDESVLKGFEAGADDYVTKPFNPEILLARVKRFLEREK--KGLYDFGDLKIDATGFTVFLKGKRIHLPKKEFEILLFL 157 (220)
T ss_dssp CCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHHCC--CSEEEETTEEEETTTTEEEETTEECCCCHHHHHHHHHH
T ss_pred CCCCEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHCC--CCCEECCCEEECCCCCEEEECCEEECCCHHHHHHHHHH
T ss_conf 3230036754414652224357320018999999983054--68354188378047629999998962899999999999
Q ss_pred HCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCEEEECCCCEEECC
Q ss_conf 112883400899998652876577766136889999998601456-77715778686303138
Q gi|254780526|r 161 MANRGKRVAKTQIFSAIYGLFDEAVEENVVESHISKLRKKLRNKL-GFDPVDSKRFLGYSIDW 222 (223)
Q Consensus 161 ~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv~~~I~rLRkKL~~~~-~~~~I~tvrg~GY~l~~ 222 (223)
++|+|++|||++|.+.+||. ..++|||++||+||||||+..+ ...+|+||||.||+|+.
T Consensus 158 ~~~~g~vvsr~~l~~~vw~~---~~~~~tv~~~I~rLRkKL~~~~~~~~~I~tvrg~GY~~~~ 217 (220)
T 1p2f_A 158 AENAGKVVTREKLLETFWED---PVSPRVVDTVIKRIRKAIEDDPNRPRYIKTIWGVGYMFTG 217 (220)
T ss_dssp HHTTTSCEEHHHHHHHHCSS---CCCTHHHHHHHHHHHHHHCSSTTSCSSEEEETTTEEEECC
T ss_pred HHCCCCEECHHHHHHHHCCC---CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEECC
T ss_conf 84899678199998786078---8886679999999999730078999839997687869738