HHsearch results for GI: 254780526 and protein with PDBid: 1qkk_A
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=99.90 E-value=2.6e-24 Score=172.24 Aligned_cols=115 Identities=17% Similarity=0.190 Sum_probs=106.0
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHC-CCCCCEECCCC
Q ss_conf 68970989999999999997898899982858999999828996799990078966217999863101-33210000244
Q gi|254780526|r 2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRA-HSQVPLIGISD 80 (223)
Q Consensus 2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~-~~~~pII~lt~ 80 (223)
|||||||+.++..+...|+..||.|..+.++..+........||++++|+. ||++||+++++.+|+ .+++||||+|+
T Consensus 6 ILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~al~~l~~~~~dliilD~~--mP~~dGle~~~~ir~~~~~~pvI~lT~ 83 (155)
T 1qkk_A 6 VFLIDDDRDLRKAMQQTLELAGFTVSSFASATEALAGLSADFAGIVISDIR--MPGMDGLALFRKILALDPDLPMILVTG 83 (155)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEEESCHHHHHHTCCTTCCSEEEEESC--CSSSCHHHHHHHHHHHCTTSCEEEEEC
T ss_pred EEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEECCCC--CCCCCHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 999959999999999999987998999789999999853269877765457--899989999999997298994898979
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 32100001112220100010233333210000011122
Q gi|254780526|r 81 YPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRR 118 (223)
Q Consensus 81 ~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lRr 118 (223)
+++.+..++++++||+|||.|||++++|..+|+..+++
T Consensus 84 ~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 84 HGDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAEEK 121 (155)
T ss_dssp GGGHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 89999999999869988975999999999999999999