HHsearch results for GI: 254780526 and protein with PDBid: 1ys7_A
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=100.00 E-value=0 Score=347.61 Aligned_cols=218 Identities=24% Similarity=0.318 Sum_probs=200.5
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCC-CCCCEECCCC
Q ss_conf 689709899999999999978988999828589999998289967999900789662179998631013-3210000244
Q gi|254780526|r 2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRAH-SQVPLIGISD 80 (223)
Q Consensus 2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~~-~~~pII~lt~ 80 (223)
|||||||+.+++.+...|+..||.|..+.+++++........||++++|+.+ |+++|+++++.+|+. +.+|||++|+
T Consensus 10 ILiVeDd~~~~~~l~~~L~~~g~~V~~a~~~~ea~~~~~~~~~dlvilD~~l--p~~~g~~~~~~~r~~~~~~~iiilt~ 87 (233)
T 1ys7_A 10 VLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINM--PVLDGVSVVTALRAMDNDVPVCVLSA 87 (233)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEEESSC--SSSCHHHHHHHHHHTTCCCCEEEEEC
T ss_pred EEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCC--CCCCCCCEEEECCCCCCCCCEECCCC
T ss_conf 9999799999999999999789999998999999999974799789752238--75568622310123577762331456
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 32100001112220100010233333210000011122222----22112222222222222222222332124210123
Q gi|254780526|r 81 YPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLKV----SNNRAETGPIRVFSDGRDPEVQGEVFPLPRRERRI 156 (223)
Q Consensus 81 ~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lRr~~~----~~~~~~~~~~~~~~~~~~~~~~g~~i~LT~~E~~l 156 (223)
+++.+++++||++||||||+|||+++||.||+++++++... .+.....|++.+|...++++++|+.+.||++||.+
T Consensus 88 ~~~~~~~v~al~~GAddyl~KP~~~~eL~a~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~v~~~g~~i~LT~~E~~l 167 (233)
T 1ys7_A 88 RSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDL 167 (233)
T ss_dssp CCTTTCCCTTTTTTCSEEEESSCCHHHHHHHHHHHHHHHHCCCCCCCCEEEETTEEEETTTTEEEETTEECCCCHHHHHH
T ss_pred CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCHHHHH
T ss_conf 68899999999779929997899879999999999986402454443222358754565442999999999647047899
Q ss_pred HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEECC
Q ss_conf 443211288340089999865287657776613688999999860145677715778686303138
Q gi|254780526|r 157 LEYLMANRGKRVAKTQIFSAIYGLFDEAVEENVVESHISKLRKKLRNKLGFDPVDSKRFLGYSIDW 222 (223)
Q Consensus 157 L~~L~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv~~~I~rLRkKL~~~~~~~~I~tvrg~GY~l~~ 222 (223)
|.+|++|+|+++||++|.+.+||. +..+++|||++||+|||+||+..+++.+|+||||.||+|+.
T Consensus 168 L~~L~~~~g~vvsr~~L~~~vw~~-~~~~~~rtvd~~I~rLRkKL~~~~~~~~I~tvrg~GY~l~~ 232 (233)
T 1ys7_A 168 LAVLAEHKTAVLSRAQLLELVWGY-DFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRM 232 (233)
T ss_dssp HHHHHHTTTCCBCHHHHHHHHHCC-CCC-CCCHHHHHHHHHHHHHHCC--CCCEEEETTTEEEECC
T ss_pred HHHHHHCCCEEEEHHHHHHHHHCC-CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEE
T ss_conf 999985378888199999998486-77888476999999999971778999809996272189986