HHsearch results for GI: 254780526 and protein with PDBid: 2hqr_A
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, symmetric dimer, signaling protein; NMR {Helicobacter pylori J99}
Probab=100.00 E-value=0 Score=334.15 Aligned_cols=212 Identities=25% Similarity=0.366 Sum_probs=193.4
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCC-CCCCEECCCC
Q ss_conf 689709899999999999978988999828589999998289967999900789662179998631013-3210000244
Q gi|254780526|r 2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRAH-SQVPLIGISD 80 (223)
Q Consensus 2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~~-~~~pII~lt~ 80 (223)
|||||||+.+++.+...|+..||.|..+.+++++..+.....||+++ ||+++|+++|+.+|+. +.+|||++|+
T Consensus 3 ILiVeDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~~~~~~~~~Dlvi------lp~~~G~~l~~~ir~~~~~~pIi~lt~ 76 (223)
T 2hqr_A 3 VLLIEKNSVLGGEIEKGLNVKGFMADVTESLEDGEYLMDIRNYDLVM------VSDKNALSFVSRIKEKHSSIVVLVSSD 76 (223)
T ss_dssp EEEECSCHHHHHHHHHHHGGGTCCEEEESSHHHHHHHHTTSCCSEEE------ECCTTHHHHHHHHHHHCTTSEEEEEES
T ss_pred EEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEE------ECCCCHHHHHHHHHHCCCCCEEEEECC
T ss_conf 99993899999999999998799999989999999998458999999------589889999999876489832998236
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 3210000111222010001023333-321000001112222222112222222222222222222332124210123443
Q gi|254780526|r 81 YPSLQTTLDFFDSGVDDVVNKPIHH-REILARVAAIYRRLKVSNNRAETGPIRVFSDGRDPEVQGEVFPLPRRERRILEY 159 (223)
Q Consensus 81 ~~~~~~~i~~l~~GAddyl~KP~~~-~eL~ari~a~lRr~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~LT~~E~~lL~~ 159 (223)
+++.++++++|++|||||+.|||++ ++|.+++++++|+.. ...+..+++.++...++++.+|+.+.||++||++|++
T Consensus 77 ~~~~~~~~~~l~~Gaddyl~KP~~~~~~l~~~~~~~~r~~~--~~~~~~~~~~~d~~~~~~~~~~~~i~Lt~~E~~lL~~ 154 (223)
T 2hqr_A 77 NPTSEEEVHAFEQGADDYIAKPYRSIKALVARIEARLRFWG--SNVIEIGDLTISPDEEKIIYKGREVEVKGKPFEVLTH 154 (223)
T ss_dssp SCCHHHHHHHHHHTCSEEEETTCSCTHHHHHHHHHHTSSCC--CCSEEETTEEEETTTTEEEETTEEECCCSTTTHHHHH
T ss_pred CCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCC--CCCCCCCCCCCCCCCEEEEECCEEEECCCCHHHHHHH
T ss_conf 67589999987539970787242202568999999972045--6621136533555306999899996058606788999
Q ss_pred HHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEECC
Q ss_conf 211288340089999865287657776613688999999860145677715778686303138
Q gi|254780526|r 160 LMANRGKRVAKTQIFSAIYGLFDEAVEENVVESHISKLRKKLRNKLGFDPVDSKRFLGYSIDW 222 (223)
Q Consensus 160 L~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv~~~I~rLRkKL~~~~~~~~I~tvrg~GY~l~~ 222 (223)
|++|+|++|||++|.+.|||. +..+++|||++||+||||||+...+...|+||||.||+|..
T Consensus 155 L~~~~g~vvsr~~L~~~vw~~-~~~~~~~tld~~I~rLRkKL~~~~~~~~I~tvrg~GY~l~~ 216 (223)
T 2hqr_A 155 LARHRDQIVSKEQLLDAIWEE-PEMVTPNVIEVAINQIRQKMDKPLGISTVETVRRRGYRFCY 216 (223)
T ss_dssp HHHTCSEEEEHHHHHHHHCCS-SCSCGGGTHHHHHHHHHHHHHTTSSSCCEEECSSSEEEECC
T ss_pred HHHCCCEEEEHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECEEEEECC
T ss_conf 987899278299998884188-77888677999999999985276999809998170368787