HHsearch results for GI: 254780526 and protein with PDBid: 2oqr_A
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D domain swapping; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=100.00 E-value=0 Score=357.89 Aligned_cols=217 Identities=25% Similarity=0.399 Sum_probs=201.3
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEECCCCC
Q ss_conf 68970989999999999997898899982858999999828996799990078966217999863101332100002443
Q gi|254780526|r 2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRAHSQVPLIGISDY 81 (223)
Q Consensus 2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~~~~~pII~lt~~ 81 (223)
|||||||+.+++.+...|+..||.|..+.+++++........||++++|+.+ |+++|+++++.++..+++||||+|++
T Consensus 7 ILlVeDd~~~~~~l~~~L~~~g~~v~~a~~~~~al~~~~~~~~DliilDi~l--p~~~g~~~~~~~~~~~~~pii~lt~~ 84 (230)
T 2oqr_A 7 VLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLML--PGMSGTDVCKQLRARSSVPVIMVTAR 84 (230)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHHHCCSEEEEESSC--SSSCHHHHHHHHHHHCSCSEEEEECC
T ss_pred EEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCC--CCCCCCCCCCCCCCCCCEEEEEEECC
T ss_conf 9999699999999999999879999998999999999974899899994899--99888742023224564079998244
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 21000011122201000102333332100000111222222-----2112222222222222222222332124210123
Q gi|254780526|r 82 PSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLKVS-----NNRAETGPIRVFSDGRDPEVQGEVFPLPRRERRI 156 (223)
Q Consensus 82 ~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lRr~~~~-----~~~~~~~~~~~~~~~~~~~~~g~~i~LT~~E~~l 156 (223)
++.++++++|++||||||+|||+++||++|+++++||.... ...+..|++.+|...++++++|+.+.||++||+|
T Consensus 85 ~~~~~~~~~l~~Gaddyl~KP~~~~eL~ari~~~~rr~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~g~~i~LT~~E~~l 164 (230)
T 2oqr_A 85 DSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDL 164 (230)
T ss_dssp HHHHHHHHHHHHCCSCCCCSSCCHHHHHHHHHHHHTTTTCTTSTTCCSCEEETTEEEETTTTEEEESSBCCCCCHHHHHH
T ss_pred CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEECCCCEEEECCEEEECCHHHHHH
T ss_conf 67688888887699889969999999999999998431455555667759989999822458999899897179999999
Q ss_pred HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCEEEECCCCEEEC
Q ss_conf 4432112883400899998652876577766136889999998601456-7771577868630313
Q gi|254780526|r 157 LEYLMANRGKRVAKTQIFSAIYGLFDEAVEENVVESHISKLRKKLRNKL-GFDPVDSKRFLGYSID 221 (223)
Q Consensus 157 L~~L~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv~~~I~rLRkKL~~~~-~~~~I~tvrg~GY~l~ 221 (223)
|.+|++|+|++|||++|.+++||. +...++|||++||+||||||+..+ ....|+||||.||+|+
T Consensus 165 L~~L~~~~~~vvsr~~l~~~vwg~-~~~~~~~tv~~~I~rLRkKL~~~~~~~~~I~Tvrg~GY~l~ 229 (230)
T 2oqr_A 165 LEYLMRNSGRVLTRGQLIDRVWGA-DYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE 229 (230)
T ss_dssp HHHHHHTTTSCEEHHHHHHHHTSS-CCTTHHHHHHHHHHHHHHHHCSSSSSCSSEEEETTTEEEEC
T ss_pred HHHHHHCCCCCCCHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEE
T ss_conf 999981899862699999986397-76888677999999999974217899975998737218980