HHsearch results for GI: 254780526 and protein with PDBid: 2oqr_A

>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D domain swapping; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=100.00  E-value=0  Score=357.89  Aligned_cols=217  Identities=25%  Similarity=0.399  Sum_probs=201.3

Q ss_pred             EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEECCCCC
Q ss_conf             68970989999999999997898899982858999999828996799990078966217999863101332100002443
Q gi|254780526|r    2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRAHSQVPLIGISDY   81 (223)
Q Consensus         2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~~~~~pII~lt~~   81 (223)
                      |||||||+.+++.+...|+..||.|..+.+++++........||++++|+.+  |+++|+++++.++..+++||||+|++
T Consensus         7 ILlVeDd~~~~~~l~~~L~~~g~~v~~a~~~~~al~~~~~~~~DliilDi~l--p~~~g~~~~~~~~~~~~~pii~lt~~   84 (230)
T 2oqr_A            7 VLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLML--PGMSGTDVCKQLRARSSVPVIMVTAR   84 (230)
T ss_dssp             EEEECSCHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHHHCCSEEEEESSC--SSSCHHHHHHHHHHHCSCSEEEEECC
T ss_pred             EEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCC--CCCCCCCCCCCCCCCCCEEEEEEECC
T ss_conf             9999699999999999999879999998999999999974899899994899--99888742023224564079998244


Q ss_pred             CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             21000011122201000102333332100000111222222-----2112222222222222222222332124210123
Q gi|254780526|r   82 PSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLKVS-----NNRAETGPIRVFSDGRDPEVQGEVFPLPRRERRI  156 (223)
Q Consensus        82 ~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lRr~~~~-----~~~~~~~~~~~~~~~~~~~~~g~~i~LT~~E~~l  156 (223)
                      ++.++++++|++||||||+|||+++||++|+++++||....     ...+..|++.+|...++++++|+.+.||++||+|
T Consensus        85 ~~~~~~~~~l~~Gaddyl~KP~~~~eL~ari~~~~rr~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~g~~i~LT~~E~~l  164 (230)
T 2oqr_A           85 DSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDL  164 (230)
T ss_dssp             HHHHHHHHHHHHCCSCCCCSSCCHHHHHHHHHHHHTTTTCTTSTTCCSCEEETTEEEETTTTEEEESSBCCCCCHHHHHH
T ss_pred             CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEECCCCEEEECCEEEECCHHHHHH
T ss_conf             67688888887699889969999999999999998431455555667759989999822458999899897179999999


Q ss_pred             HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCEEEECCCCEEEC
Q ss_conf             4432112883400899998652876577766136889999998601456-7771577868630313
Q gi|254780526|r  157 LEYLMANRGKRVAKTQIFSAIYGLFDEAVEENVVESHISKLRKKLRNKL-GFDPVDSKRFLGYSID  221 (223)
Q Consensus       157 L~~L~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv~~~I~rLRkKL~~~~-~~~~I~tvrg~GY~l~  221 (223)
                      |.+|++|+|++|||++|.+++||. +...++|||++||+||||||+..+ ....|+||||.||+|+
T Consensus       165 L~~L~~~~~~vvsr~~l~~~vwg~-~~~~~~~tv~~~I~rLRkKL~~~~~~~~~I~Tvrg~GY~l~  229 (230)
T 2oqr_A          165 LEYLMRNSGRVLTRGQLIDRVWGA-DYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE  229 (230)
T ss_dssp             HHHHHHTTTSCEEHHHHHHHHTSS-CCTTHHHHHHHHHHHHHHHHCSSSSSCSSEEEETTTEEEEC
T ss_pred             HHHHHHCCCCCCCHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEE
T ss_conf             999981899862699999986397-76888677999999999974217899975998737218980