HHsearch results for GI: 254780526 and protein with PDBid: 3c3w_A
>3c3w_A Two component transcriptional regulatory protein DEVR; response regulator, two-component regulatory system, DNA- binding protein; 2.20A {Mycobacterium tuberculosis}
Probab=99.91 E-value=2.1e-25 Score=179.18 Aligned_cols=194 Identities=24% Similarity=0.282 Sum_probs=151.0
Q ss_pred EEEECCCHHHHHHHHHHHHHCC-CE-EEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHC-CCCCCEECC
Q ss_conf 6897098999999999999789-88-99982858999999828996799990078966217999863101-332100002
Q gi|254780526|r 2 FVLIDDRALVKDGYIALFGDDG-VS-LEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRA-HSQVPLIGI 78 (223)
Q Consensus 2 ILiVeDd~~~~~~l~~~L~~~g-~~-v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~-~~~~pII~l 78 (223)
|||||||+.++.++...|+..+ +. |..+.+++++........||++++|+.+ |+++|+++++.+++ .+++|||++
T Consensus 4 IlivdD~~~~r~~l~~~L~~~~~~~vv~~a~~~~eal~~~~~~~pdlvl~d~~l--~~~~g~~~~~~l~~~~~~~~vi~~ 81 (225)
T 3c3w_A 4 VFLVDDHEVVRRGLVDLLGADPELDVVGEAGSVAEAMARVPAARPDVAVLDVRL--PDGNGIELCRDLLSRMPDLRCLIL 81 (225)
T ss_dssp EEEECSCHHHHHHHHHHHHTCTTEEEEEEESSHHHHHHHHHHHCCSEEEECSEE--TTEEHHHHHHHHHHHCTTCEEEEG
T ss_pred EEEEECCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCEEEEECCC--CCCCCHHHHHHHHCCCCCCCEEEE
T ss_conf 999969899999999999858994899997999999999986599899982778--998615898875302899857863
Q ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 44321000011122201000102333332100000111222222211222222222222222222233212421012344
Q gi|254780526|r 79 SDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLKVSNNRAETGPIRVFSDGRDPEVQGEVFPLPRRERRILE 158 (223)
Q Consensus 79 t~~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lRr~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~LT~~E~~lL~ 158 (223)
|+..+.....+++++||++|+.||++.+++...++++.++....+........ .............-.||+||.++|.
T Consensus 82 t~~~~~~~~~~al~~Ga~~~l~K~~~~~~l~~~i~~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~LT~RE~eVL~ 159 (225)
T 3c3w_A 82 TSYTSDEAMLDAILAGASGYVVKDIKGMELARAVKDVGAGRSLLDNRAAAALM--AKLRGAAEKQDPLSGLTDQERTLLG 159 (225)
T ss_dssp GGSSSHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHH--HHHHHHHHHSCTTTTSCHHHHHHHH
T ss_pred ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH--HHHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf 15665789999998498877406777999999999998699768978999999--8864023336755679999999999
Q ss_pred HHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 321128834008999986528765777661368899999986014567771
Q gi|254780526|r 159 YLMANRGKRVAKTQIFSAIYGLFDEAVEENVVESHISKLRKKLRNKLGFDP 209 (223)
Q Consensus 159 ~L~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv~~~I~rLRkKL~~~~~~~~ 209 (223)
++++ | .|..+|++.+ .++.+||++|++++++||+.....+.
T Consensus 160 ll~~--G--~snkeIA~~L------~iS~~TVk~h~~~I~~KLgv~nr~ea 200 (225)
T 3c3w_A 160 LLSE--G--LTNKQIADRM------FLAEKTVKNYVSRLLAKLGMERRTQA 200 (225)
T ss_dssp HHHT--T--CCHHHHHHHH------TCCHHHHHHHHHHHHHHTTCCSSCHH
T ss_pred HHHH--C--CCHHHHHHHH------CCCHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 9993--8--9888999997------88799999999999999689999999