HHsearch results for GI: 254780526 and protein with PDBid: 3c3w_A

>3c3w_A Two component transcriptional regulatory protein DEVR; response regulator, two-component regulatory system, DNA- binding protein; 2.20A {Mycobacterium tuberculosis}
Probab=99.91  E-value=2.1e-25  Score=179.18  Aligned_cols=194  Identities=24%  Similarity=0.282  Sum_probs=151.0

Q ss_pred             EEEECCCHHHHHHHHHHHHHCC-CE-EEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHC-CCCCCEECC
Q ss_conf             6897098999999999999789-88-99982858999999828996799990078966217999863101-332100002
Q gi|254780526|r    2 FVLIDDRALVKDGYIALFGDDG-VS-LEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRA-HSQVPLIGI   78 (223)
Q Consensus         2 ILiVeDd~~~~~~l~~~L~~~g-~~-v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~-~~~~pII~l   78 (223)
                      |||||||+.++.++...|+..+ +. |..+.+++++........||++++|+.+  |+++|+++++.+++ .+++|||++
T Consensus         4 IlivdD~~~~r~~l~~~L~~~~~~~vv~~a~~~~eal~~~~~~~pdlvl~d~~l--~~~~g~~~~~~l~~~~~~~~vi~~   81 (225)
T 3c3w_A            4 VFLVDDHEVVRRGLVDLLGADPELDVVGEAGSVAEAMARVPAARPDVAVLDVRL--PDGNGIELCRDLLSRMPDLRCLIL   81 (225)
T ss_dssp             EEEECSCHHHHHHHHHHHHTCTTEEEEEEESSHHHHHHHHHHHCCSEEEECSEE--TTEEHHHHHHHHHHHCTTCEEEEG
T ss_pred             EEEEECCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCEEEEECCC--CCCCCHHHHHHHHCCCCCCCEEEE
T ss_conf             999969899999999999858994899997999999999986599899982778--998615898875302899857863


Q ss_pred             CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             44321000011122201000102333332100000111222222211222222222222222222233212421012344
Q gi|254780526|r   79 SDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLKVSNNRAETGPIRVFSDGRDPEVQGEVFPLPRRERRILE  158 (223)
Q Consensus        79 t~~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lRr~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~LT~~E~~lL~  158 (223)
                      |+..+.....+++++||++|+.||++.+++...++++.++....+........  .............-.||+||.++|.
T Consensus        82 t~~~~~~~~~~al~~Ga~~~l~K~~~~~~l~~~i~~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~LT~RE~eVL~  159 (225)
T 3c3w_A           82 TSYTSDEAMLDAILAGASGYVVKDIKGMELARAVKDVGAGRSLLDNRAAAALM--AKLRGAAEKQDPLSGLTDQERTLLG  159 (225)
T ss_dssp             GGSSSHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHH--HHHHHHHHHSCTTTTSCHHHHHHHH
T ss_pred             ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH--HHHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf             15665789999998498877406777999999999998699768978999999--8864023336755679999999999


Q ss_pred             HHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             321128834008999986528765777661368899999986014567771
Q gi|254780526|r  159 YLMANRGKRVAKTQIFSAIYGLFDEAVEENVVESHISKLRKKLRNKLGFDP  209 (223)
Q Consensus       159 ~L~~~~g~~vsr~~l~~~iwg~~~~~~~~~tv~~~I~rLRkKL~~~~~~~~  209 (223)
                      ++++  |  .|..+|++.+      .++.+||++|++++++||+.....+.
T Consensus       160 ll~~--G--~snkeIA~~L------~iS~~TVk~h~~~I~~KLgv~nr~ea  200 (225)
T 3c3w_A          160 LLSE--G--LTNKQIADRM------FLAEKTVKNYVSRLLAKLGMERRTQA  200 (225)
T ss_dssp             HHHT--T--CCHHHHHHHH------TCCHHHHHHHHHHHHHHTTCCSSCHH
T ss_pred             HHHH--C--CCHHHHHHHH------CCCHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf             9993--8--9888999997------88799999999999999689999999