HHsearch results for GI: 254780526 and protein with PDBid: 3f6p_A
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} PDB: 2zwm_A
Probab=99.92 E-value=3.5e-25 Score=177.74 Aligned_cols=116 Identities=23% Similarity=0.295 Sum_probs=110.4
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEECCCCC
Q ss_conf 68970989999999999997898899982858999999828996799990078966217999863101332100002443
Q gi|254780526|r 2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLELPRIIRAHSQVPLIGISDY 81 (223)
Q Consensus 2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~~~d~~iid~~l~~~~~~g~~l~~~lr~~~~~pII~lt~~ 81 (223)
|||||||+.+++.+...|+..||.|..+.+++++..+.....||++++|+.| |+++|+++++.+|+.+++|||++|+.
T Consensus 5 ILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~al~~l~~~~~dlii~D~~m--P~~~G~e~~~~~r~~~~~~ii~lt~~ 82 (120)
T 3f6p_A 5 ILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIML--PNKDGVEVCREVRKKYDMPIIMLTAK 82 (120)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCSEEEEETTS--TTTHHHHHHHHHHTTCCSCEEEEEES
T ss_pred EEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEEECCC--CCCCHHHHHHHHHHCCCCCEEEEECC
T ss_conf 9999399999999999999889999998999999999971899999982999--99999999999981689958999767
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 21000011122201000102333332100000111222
Q gi|254780526|r 82 PSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRL 119 (223)
Q Consensus 82 ~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lRr~ 119 (223)
++.+++.+++++||+||+.|||++++|+++|++++||.
T Consensus 83 ~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~lrR~ 120 (120)
T 3f6p_A 83 DSEIDKVIGLEIGADDYVTKPFSTRELLARVKANLRRQ 120 (120)
T ss_dssp SCHHHHHHHHHTTCCEEEEESCCHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCC
T ss_conf 99999999997599989979999999999999997679