HHsearch results for GI: 254780526 and protein with PDBid: 3luf_A
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=99.90 E-value=1.4e-24 Score=173.99 Aligned_cols=118 Identities=16% Similarity=0.219 Sum_probs=103.5
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHC-CCCEEEEEEECCCCCCHHHHHHHHHHCC---CCCCEEC
Q ss_conf 68970989999999999997898899982858999999828-9967999900789662179998631013---3210000
Q gi|254780526|r 2 FVLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSA-REDVSAIEAFLIGKGEKVLELPRIIRAH---SQVPLIG 77 (223)
Q Consensus 2 ILiVeDd~~~~~~l~~~L~~~g~~v~~~~~~~~~~~l~~~~-~~d~~iid~~l~~~~~~g~~l~~~lr~~---~~~pII~ 77 (223)
||+|||++..+..+...|+..||.|..+.++.++....... .||++++|+ .||++||+++|+.+|+. .++|||+
T Consensus 127 VLvVDD~~~~~~~i~~~L~~~g~~v~~a~~g~eal~~l~~~~~~DlIllD~--~MP~~dG~e~~~~iR~~~~~~~iPII~ 204 (259)
T 3luf_A 127 VLVVDDSRTSRHRTMAQLRKQLLQVHEASHAREALATLEQHPAIRLVLVDY--YMPEIDGISLVRMLRERYSKQQLAIIG 204 (259)
T ss_dssp EEEECSCHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHHHCTTEEEEEECS--CCSSSCHHHHHHHHHHHCCTTTSEEEE
T ss_pred EEEECCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHCCCCCEEEEECC--CCCCCCHHHHHHHHHHCCCCCCCEEEE
T ss_conf 787538889999999999834662453240568999984489965999647--776754899999998378899994999
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 24432100001112220100010233333210000011122222
Q gi|254780526|r 78 ISDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLKV 121 (223)
Q Consensus 78 lt~~~~~~~~i~~l~~GAddyl~KP~~~~eL~ari~a~lRr~~~ 121 (223)
+|++++++++.+++++||||||+|||+++||.+||++.++|.+.
T Consensus 205 lTa~~~~~~~~~~~~~Ga~d~l~KP~~~~eL~~~i~~~L~~~~~ 248 (259)
T 3luf_A 205 ISVSDKRGLSARYLKQGANDFLNQPFEPEELQCRVSHNLEALEQ 248 (259)
T ss_dssp EECSSSSSHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHHHHC
T ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 98999989999999879999998989999999999999999999