RPSBLAST alignment for GI: 254780526 and conserved domain: COG0745
>gnl|CDD|31088 COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]. Length = 229
Score = 107 bits (269), Expect = 2e-24
Identities = 51/225 (22%), Positives = 99/225 (44%), Gaps = 8/225 (3%)
Query: 3 VLIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEKVLE 62
+L++D + + ++G ++ E + V G ++
Sbjct: 4 LLVEDDPELAELLKEYLEEEGYEVDVAADGEEALEAAREQPDLVLLDLMLPDLDGLELCR 63
Query: 63 LPRIIRAHSQVPLIGISDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRLKVS 122
R + S P+I ++ + + ++G DD + KP RE+LAR+ A+ RR +
Sbjct: 64 RLRA-KKGSGPPIIVLTARDDEEDRVLGLEAGADDYLTKPFSPRELLARLRALLRRNAGA 122
Query: 123 NNRA-----ETGPIRVFSDGRDPEVQGEVFPLPRRERRILEYLMANRGKRVAKTQIFSAI 177
+ G + + D R + G L +E +LE L + G+ +++ Q+ A+
Sbjct: 123 SRAEASEVLVFGDLTLDPDTRTVTLNGRELTLTPKEFELLELLARHPGRVLSREQLLEAV 182
Query: 178 YGLFDEAVEENVVESHISKLRKKLRNKLGFDP-VDSKRFLGYSID 221
+G +D V+ V+ HIS+LRKKL G + + R +GY ++
Sbjct: 183 WG-YDFEVDSRTVDVHISRLRKKLEKDPGAGRLIRTVRGVGYRLE 226