RPSBLAST alignment of GI: 254780526 and protein with PDBid: 3cu5

>3cu5_A Two component transcriptional regulator, ARAC family; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg} Length = 141

 Score = 44.2 bits (104), Expect = 2e-05
 Identities = 21/118 (17%), Positives = 43/118 (36%), Gaps = 2/118 (1%)

Query: 4   LIDDRALVKDGYIALFGDDGVSLEGFNSLEFEEW-LQSSAREDVSAIEAFLIGKGEKVLE 62
           ++DD  L +DG IA      +S +  +  +     +Q + +   + +   +       +E
Sbjct: 7   IVDDEKLTRDGLIANINWKALSFDQIDQADDGINAIQIALKHPPNVLLTDVRMPRMDGIE 66

Query: 63  LPRIIRA-HSQVPLIGISDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRL 119
           L   I   +    +I +S Y   +             V KPI   EI+  +    + +
Sbjct: 67  LVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPIDPSEIMDALKQSIQTV 124