RPSBLAST alignment of GI: 254780526 and protein with PDBid: 3klo

>3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A* Length = 225

 Score = 55.1 bits (132), Expect = 1e-08
 Identities = 28/202 (13%), Positives = 65/202 (32%), Gaps = 13/202 (6%)

Query: 3   VLIDDRALVKDG---YIALFGDDGVSLEGFNSLEFEEWLQSSAREDVSAIEAFLIGKGEK 59
            ++ D  +        +       + +  F+ L  EE    S    +  I+   I     
Sbjct: 11  RMLSDVCMQSRLLKEALESKLPLALEITPFSELWLEENKPESRSIQMLVIDYSRISDDVL 70

Query: 60  VLELPRIIRAHSQVPLIGISDYPSLQTTLDFFDSGVDDVVNKPIHHREILARVAAIYRRL 119
                    +      + I+    ++  L F  + +  V         ++  ++ I +  
Sbjct: 71  TDYSSFKHISCPDAKEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIKGMSKILQDE 130

Query: 120 KVSNNRAETGPIRVFSDGRDPEVQGEVFPLPRRERRILEYLMANRGKRVAKTQIFSAIYG 179
                +     I  +  G           L +RE++I++ L +         +I   ++ 
Sbjct: 131 MWLTRKLAQEYILHYRAGNSVVTSQMYAKLTKREQQIIKLLGSGASNI----EIADKLF- 185

Query: 180 LFDEAVEENVVESHISKLRKKL 201
                V EN V++H+  + KK+
Sbjct: 186 -----VSENTVKTHLHNVFKKI 202