BLAST/PSIBLAST alignment of GI: 254780527 and GI: 116250497 at iteration 2
>gi|116250497|ref|YP_766335.1| chemotaxis MotD protein (motility protein D) [Rhizobium leguminosarum bv. viciae 3841] Length = 477
>gi|115255145|emb|CAK06219.1| putative chemotaxis MotD protein (motility protein D) [Rhizobium leguminosarum bv. viciae 3841] Length = 477
 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 5/103 (4%)

Query: 240 KSFMRVTMIPESVHYTDTGSI-KALTIQMKPNSPDNIVATLCLSGEKLSVKLRVESDFLY 298
           ++    + +  +  +T TG +   L IQM P     + AT+ LSG+ L++ L+V++   Y
Sbjct: 322 RAMEPSSALSNAAEWTSTGKVVNTLKIQMNPLDLGLVTATMRLSGDALNIDLKVDTGAAY 381

Query: 299 KKIQSGRQNILDALNFSGYTMDRFDVEFVRKDSLDLLKDSMNY 341
           ++++     IL+AL   GY ++   +     +      D+ N 
Sbjct: 382 RQMKEDHGKILEALRSQGYAVENVTISMAPVER----PDAGNQ 420