RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= gi|254780527|ref|YP_003064940.1| hypothetical protein
CLIBASIA_02070 [Candidatus Liberibacter asiaticus str. psy62]
         (397 letters)



>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
           photosynthetic reaction center, peripheral antenna; HET:
           CL1 PQN; 4.44A {Pisum sativum} (F:1-76)
          Length = 76

 Score = 28.9 bits (64), Expect = 1.2
 Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 8/35 (22%)

Query: 259 SIKALTIQMKPNSPDNIVATLCLSGEKLSVKLRVE 293
           ++K L   +K  + D        S   L++K  +E
Sbjct: 21  ALKKLQASLKLYADD--------SAPALAIKATME 47


>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan
           indole-lyase, pyridoxal 5'-phosphate, monovalent cation
           binding site; HET: LLP; 2.10A {Proteus vulgaris}
           (A:1-54,A:321-467)
          Length = 201

 Score = 26.6 bits (59), Expect = 6.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 160 DVFSQLKSDSGSFSNYLRHR 179
            V+  L +DSG+   YL +R
Sbjct: 43  AVYIDLLTDSGTEEEYLHYR 62


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.315    0.132    0.372 

Gapped
Lambda     K      H
   0.267   0.0633    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 2,817,703
Number of extensions: 124433
Number of successful extensions: 203
Number of sequences better than 10.0: 1
Number of HSP's gapped: 203
Number of HSP's successfully gapped: 8
Length of query: 397
Length of database: 4,956,049
Length adjustment: 90
Effective length of query: 307
Effective length of database: 1,913,599
Effective search space: 587474893
Effective search space used: 587474893
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (25.6 bits)