BLAST/PSIBLAST alignment of GI: 254780528 and GI: 116250496 at iteration 1
>gi|116250496|ref|YP_766334.1| chemotaxis protein [Rhizobium leguminosarum bv. viciae 3841] Length = 431
>gi|115255144|emb|CAK06218.1| putative chemotaxis MotC protein precursor (motility protein c) [Rhizobium leguminosarum bv. viciae 3841] Length = 431
 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 187/395 (47%), Gaps = 30/395 (7%)

Query: 30  IVPYQCVRSLQRALDEAMRGDISLQKKIPDIVKETGVQLRATHMDVFVDNRNIDAVWIYT 89
           + PY+ +RSLQ   D  + GD S  +    ++     +LR     +F D+RN+DA  IYT
Sbjct: 32  LAPYKMLRSLQFVQDSVVTGDHSAGEMQRFMLGTIDTRLRTVEPSIFDDDRNVDAALIYT 91

Query: 90  IISQDLSVVDDLIAKDTKGYFDIAIVYALKKYFSGQLEESSKELSKIKDKDNTRGIVPYL 149
           +   +   ++ LIA D  GYFD  +   L+KY SG+    +K L +   +   + I PYL
Sbjct: 92  MSGGNPQTLEYLIAHDVNGYFDNRVTDVLRKYLSGKGLLVAKTLQETAREYRDKKIGPYL 151

Query: 150 HLLIGRAMMPFSSQQAVHFFDYVRLTSPGTFLEEIALRNLLEITQNE-VGERAFGYIRAY 208
            L+ G  ++      A+  +D  RL +PGT +EE ALR  + I  ++ + +R   Y + Y
Sbjct: 152 ALIGGNVLIATKPTDALDLYDQARLAAPGTIVEEAALRRSVAICVDKGMLDRGMAYSQRY 211

Query: 209 VTQFHHSIYKDHFISVLLRFFLHGQLKLPDEDIVFTISFFSLEEQRAIYLKIAQNSVISG 268
           V +F HS Y   F  + +   +     +  +D++  +SF     QR +YL+IA+ + ISG
Sbjct: 212 VRRFLHSPYASQFADLFVTLVVGHDHDVKPQDVIDILSFMDAPRQREVYLRIARAAAISG 271

Query: 269 KRKIGFLAIKQLKRIIDRLDYKDLATIQLYENILNIPFVDIMSLQRSTCNIPYYSLMEQD 328
           K ++  +A+ +++ +    D         Y  +  +P  DI    ++   I   +L  +D
Sbjct: 272 KPELARMAVGRVQSLGGGTDNAFGPLADFYGGMAGLPTEDIDQAAKNVSGIDGNALSRRD 331

Query: 329 RYLKKASEIIMSEIGK----------SLIDIDFEHIQKD----LLLDKKEPRHTN--VSM 372
           + L++A+  +  +I +          S ++ D + I  +    + +    P   +  V  
Sbjct: 332 QALQEAARSVAEQILRAPDPASLTQASNLNTDHQEITSEKAAAIAMQPGAPGALSEPVPG 391

Query: 373 GIES-------------FIKKNRSQIESIDVLLAE 394
           G+ S             F+  +RS+++ ID LLA+
Sbjct: 392 GVASTGQSQDTDPSFNAFVTTSRSKLDEIDGLLAQ 426