HHsearch alignment for GI: 254780529 and conserved domain: COG2885

>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane].

Probab=99.93  E-value=5.5e-26  Score=192.53  Aligned_cols=105  Identities=29%  Similarity=0.408  Sum_probs=97.7

Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEE
Q ss_conf             567455568754683565654436789861278-3389873146766787410699999999999999998699965712
Q gi|254780529|r  232 RNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRIS  310 (343)
Q Consensus       232 ~~~~lF~~gsa~l~~~~~~~l~~ia~~l~~~~~-~i~IeGHTD~~p~~g~~~~Nw~LS~~RA~aV~~~L~~~Gv~~~ri~  310 (343)
T Consensus        82 ~~~v~F~~ds~~l~p~~~~~L~~~a~~L~~~p~~~i~V~GHTD~~---Gs~~yN~~LS~rRA~aV~~~L~~~Gv~~~~i~  158 (190)
T COG2885          82 PNDVLFDFDSSVLKPKAQATLDELAKYLKKNPITRILVEGHTDST---GSDEYNQALSERRAEAVADYLVSQGVVADRIS  158 (190)
T ss_pred             CCEEEECCCCHHHCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC---CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf             540683588344398999999999999987899779997557887---98678768889999999999998499701178


Q ss_pred             EEEECCCCCCCCCCCCCC--CCCCEEEEEEEC
Q ss_conf             256303348888988521--337559999956
Q gi|254780529|r  311 KISGFAHHRLKIASDPMN--SANRRIDILVED  340 (343)
Q Consensus       311 ~v~G~g~~~P~~~n~t~~--~~NRRVEi~i~~  340 (343)
T Consensus       159 -~~G~G~~~Pia~n~t~~gra~NRRVei~i~~  189 (190)
T COG2885         159 -TVGYGEEKPIASNATEEGRAKNRRVEIKISP  189 (190)
T ss_pred             -EEECCCCCCCCCCCCCHHCCCCCCEEEEEEC
T ss_conf             -9861645777889780010346747898627