HHsearch alignment for GI: 254780529 and conserved domain: PRK06778
>PRK06778 hypothetical protein; Validated.
Probab=100.00 E-value=0 Score=461.07 Aligned_cols=259 Identities=28% Similarity=0.436 Sum_probs=192.0
Q ss_pred CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 86899982168888788743188799999999999999999750899999999998535543203665555555676776
Q gi|254780529|r 13 QFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKKAIEQYFNPFGKNLMTASKGIFDEQNPPER 92 (343)
Q Consensus 13 ~~~iikr~~~~~~~~~~~~~W~vtyAD~~TlLmaFFvll~s~s~~d~~k~~~i~~~f~p~~~~~~~~~~~~~~~~~~~~~ 92 (343)
T Consensus 2 ~~~Iikr~~k~~~~~hHgGaWkVaYADfmTaLMAFFvvmw~ls~~~~~k~~~ia~~~~~~~~---------~~~g~~~~~ 72 (289)
T PRK06778 2 ATTIIKRANRKKHHVRHSGAWKVAFADFTLAMMALFMVLWIVNSVSKSERESIIAALHGQSI---------FNGGGLSPL 72 (289)
T ss_pred CEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC---------CCCCCCCCC
T ss_conf 61899985337888997840598999999999999999999757999999999998455644---------348987865
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 66665544455566766656566776655443211222111233211111222223343222222200123210011100
Q gi|254780529|r 93 SSQNKIDLSIDEHITKNSVDLKIGSTNQKKQYQRLENNIFYLSNSQQSEHCKNSLTRDSEKGKDLCKSTDLEKSINKEEN 172 (343)
Q Consensus 93 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (343)
T Consensus 73 ~~~~-~-------~~~~--~~~~~~~~-------------------------------~~~~~-~--~~~~--------- 99 (289)
T PRK06778 73 NKIS-P-------SHPP--KPATVAVP-------------------------------EETEK-K--ARDV--------- 99 (289)
T ss_pred CCCC-C-------CCCC--CCCCCCCC-------------------------------CCCCC-C--HHHH---------
T ss_conf 6678-8-------8888--87656677-------------------------------66764-0--0105---------
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 12465213578878889999999999999975553321013114511453499997034567455568754683565654
Q gi|254780529|r 173 YFLPPLSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVL 252 (343)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~~~~~i~I~i~d~~~~~lF~~gsa~l~~~~~~~l 252 (343)
T Consensus 100 -----~~~~~~~~~~~~~~l~~l~~~i~~~~~~---~~l~~~v~~~it~~GL~I~i~D~~~~~mF~~GSa~l~p~~~~lL 171 (289)
T PRK06778 100 -----NEKTALLKKKSATELGELATSINTIARD---AHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKRLL 171 (289)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHH
T ss_conf -----6777888888899999999999999988---76642704898489408999837888782889875687899999
Q ss_pred HHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 43678986127833898731467667874106999999999999999986999657122563033488889885213375
Q gi|254780529|r 253 QKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMNSANR 332 (343)
Q Consensus 253 ~~ia~~l~~~~~~i~IeGHTD~~p~~g~~~~Nw~LS~~RA~aV~~~L~~~Gv~~~ri~~v~G~g~~~P~~~n~t~~~~NR 332 (343)
T Consensus 172 ~~ia~vL~~~~n~I~I~GHTD~~Pi~~~~ySNWELSa~RA~avrr~L~~~Gl~~~ri~~V~G~Ad~~p~~~~dP~~~~NR 251 (289)
T PRK06778 172 VELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNR 251 (289)
T ss_pred HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 99999986289538997405777777888996066899999999999985999768889998457777899998765468
Q ss_pred EEEEEEECC
Q ss_conf 599999569
Q gi|254780529|r 333 RIDILVEDR 341 (343)
Q Consensus 333 RVEi~i~~~ 341 (343)
T Consensus 252 RI~I~vL~~ 260 (289)
T PRK06778 252 RIEIMVLTK 260 (289)
T ss_pred CEEEEEECH
T ss_conf 579999786