>TIGR02802 Pal_lipo peptidoglycan-associated lipoprotein; InterPro: IPR014169 Members in this entry represent the peptidoglycan-associated lipoprotein (Pal or OprL) protein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The entry represents only the conserved C-terminal domain..

Probab=99.91 E-value=7.9e-25 Score=184.83 Aligned_cols=100 Identities=25% Similarity=0.299 Sum_probs=94.3 Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEE Q ss_conf 455568754683565654436789861278-3389873146766787410699999999999999998699965712256 Q gi|254780529|r 235 PMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISKIS 313 (343) Q Consensus 235 ~lF~~gsa~l~~~~~~~l~~ia~~l~~~~~-~i~IeGHTD~~p~~g~~~~Nw~LS~~RA~aV~~~L~~~Gv~~~ri~~v~ 313 (343) T Consensus 2 vyF~~D~~~l~~e~~~~l~~hA~~L~~~p~~~V~iEGH~DER---GTrEYNlALGeRRA~AV~~yL~~~GV~~~q~~~v- 77 (104) T TIGR02802 2 VYFDFDSSDLKSEAQAILDAHAQYLKKNPSVRVTIEGHTDER---GTREYNLALGERRANAVKDYLQAKGVSASQIETV- 77 (104) T ss_pred EECCCCHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC---CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE- T ss_conf 432358143177999999998999986799378886307888---8877777788999999999999738961100463- Q ss_pred ECCCCCCCCCCCCC--CCCCCEEEEEE Q ss_conf 30334888898852--13375599999 Q gi|254780529|r 314 GFAHHRLKIASDPM--NSANRRIDILV 338 (343) Q Consensus 314 G~g~~~P~~~n~t~--~~~NRRVEi~i 338 (343) T Consensus 78 SYGkErP~~~G~~E~~wakNRR~~~vy 104 (104) T TIGR02802 78 SYGKERPAALGHDEAAWAKNRRAVLVY 104 (104) T ss_pred ECCCCCCCCCCCCHHHHHHCCCCCCCC T ss_conf 026656877898857775405310049

HHsearch alignment for GI: 254780529 and conserved domain: TIGR02802