HHsearch alignment of GI: 254780529 and MMDB domain: 3khn_A_

>3khn_A (A:) MOTB protein, putative; structural genomics, OMPA-like domain, PSI-2, protein structure initiative; 2.03A {Desulfovibrio vulgaris str}
Probab=99.95  E-value=1.5e-26  Score=195.91  Aligned_cols=130  Identities=18%  Similarity=0.305  Sum_probs=115.3

Q ss_pred             HHHCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCCCC--CCCCCHH
Q ss_conf             21013114511453499997034567455568754683565654436789861278-33898731467667--8741069
Q gi|254780529|r  209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR--NIARDNW  285 (343)
Q Consensus       209 ~~~~~~~~v~~~~~~i~I~i~d~~~~~lF~~gsa~l~~~~~~~l~~ia~~l~~~~~-~i~IeGHTD~~p~~--g~~~~Nw  285 (343)
                      ......+.+...+.+++|.+   ...++|++||+.|+++++..|..++.+|..+|. .|.|+||||+++..  +.+.+||
T Consensus        30 ~~~~~~~~v~~~~~~~~i~~---~~~~~F~~gs~~l~~~~~~~L~~ia~~l~~~~~~~i~I~GhtD~~g~~~~~~~~~n~  106 (174)
T 3khn_A           30 NGVEGVIGAVFDEGVITLRV---PSEVLFAPGAVELAPGADRVLATLKDLFIRRREQNINIKGFTDDVQPSANARFKDNW  106 (174)
T ss_dssp             TTCTTTCEEEEETTEEEEEE---EHHHHBCTTCCSBCTTHHHHHHHHHHHHHHTTTCEEEEEEECCSCCCCTTSSCSSHH
T ss_pred             HCCCCCEEEEEECCEEEEEE---CCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHH
T ss_conf             14677569998399899994---687324699740298899999999875403874299997403676665566432013


Q ss_pred             HHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCCCC--CCCCEEEEEEECCC
Q ss_conf             9999999999999998699965712256303348888988521--33755999995699
Q gi|254780529|r  286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ  342 (343)
Q Consensus       286 ~LS~~RA~aV~~~L~~~Gv~~~ri~~v~G~g~~~P~~~n~t~~--~~NRRVEi~i~~~~  342 (343)
                      +||.+||.+|+.||...|+++.||. +.|||+++|+++|++..  ++||||||+|....
T Consensus       107 ~LS~~RA~~V~~~l~~~gi~~~ri~-~~g~G~~~p~~~~~~~~~~~~NRRVei~i~~~~  164 (174)
T 3khn_A          107 EVSALRSVNVLRYFLGAGIEPARLT-ATGLGELDPLFPNTSDENRARNRRVEFVLERRV  164 (174)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCGGGEE-EEEEETSSCSSCSSSHHHHHHHSEEEEEEEC--
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCEE-EEEEECCCCCCCCCCHHHHHHCCCEEEEEEECC
T ss_conf             6889999999999987147866679-998424577799939789987396899998545