HHsearch alignment of GI: 254780529 and MMDB domain: 3khn_A_
>3khn_A (A:) MOTB protein, putative; structural genomics, OMPA-like domain, PSI-2, protein structure initiative; 2.03A {Desulfovibrio vulgaris str}
Probab=99.95 E-value=1.5e-26 Score=195.91 Aligned_cols=130 Identities=18% Similarity=0.305 Sum_probs=115.3
Q ss_pred HHHCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCCCC--CCCCCHH
Q ss_conf 21013114511453499997034567455568754683565654436789861278-33898731467667--8741069
Q gi|254780529|r 209 DNIVKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFR--NIARDNW 285 (343)
Q Consensus 209 ~~~~~~~~v~~~~~~i~I~i~d~~~~~lF~~gsa~l~~~~~~~l~~ia~~l~~~~~-~i~IeGHTD~~p~~--g~~~~Nw 285 (343)
......+.+...+.+++|.+ ...++|++||+.|+++++..|..++.+|..+|. .|.|+||||+++.. +.+.+||
T Consensus 30 ~~~~~~~~v~~~~~~~~i~~---~~~~~F~~gs~~l~~~~~~~L~~ia~~l~~~~~~~i~I~GhtD~~g~~~~~~~~~n~ 106 (174)
T 3khn_A 30 NGVEGVIGAVFDEGVITLRV---PSEVLFAPGAVELAPGADRVLATLKDLFIRRREQNINIKGFTDDVQPSANARFKDNW 106 (174)
T ss_dssp TTCTTTCEEEEETTEEEEEE---EHHHHBCTTCCSBCTTHHHHHHHHHHHHHHTTTCEEEEEEECCSCCCCTTSSCSSHH
T ss_pred HCCCCCEEEEEECCEEEEEE---CCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHH
T ss_conf 14677569998399899994---687324699740298899999999875403874299997403676665566432013
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCCCC--CCCCEEEEEEECCC
Q ss_conf 9999999999999998699965712256303348888988521--33755999995699
Q gi|254780529|r 286 RLSLDRAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 (343)
Q Consensus 286 ~LS~~RA~aV~~~L~~~Gv~~~ri~~v~G~g~~~P~~~n~t~~--~~NRRVEi~i~~~~ 342 (343)
+||.+||.+|+.||...|+++.||. +.|||+++|+++|++.. ++||||||+|....
T Consensus 107 ~LS~~RA~~V~~~l~~~gi~~~ri~-~~g~G~~~p~~~~~~~~~~~~NRRVei~i~~~~ 164 (174)
T 3khn_A 107 EVSALRSVNVLRYFLGAGIEPARLT-ATGLGELDPLFPNTSDENRARNRRVEFVLERRV 164 (174)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEE-EEEEETSSCSSCSSSHHHHHHHSEEEEEEEC--
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCEE-EEEEECCCCCCCCCCHHHHHHCCCEEEEEEECC
T ss_conf 6889999999999987147866679-998424577799939789987396899998545