HHsearch alignment of GI: 254780529 and MMDB domain: 3ldt_A_
>3ldt_A (A:) Outer membrane protein, OMPA family protein; OMPA-like domain, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Legionella pneumophila}
Probab=99.94 E-value=4.9e-26 Score=192.48 Aligned_cols=125 Identities=18% Similarity=0.220 Sum_probs=114.2
Q ss_pred CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCCCCCCCCCHHHHHHH
Q ss_conf 13114511453499997034567455568754683565654436789861278-33898731467667874106999999
Q gi|254780529|r 212 VKGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLD 290 (343)
Q Consensus 212 ~~~~~v~~~~~~i~I~i~d~~~~~lF~~gsa~l~~~~~~~l~~ia~~l~~~~~-~i~IeGHTD~~p~~g~~~~Nw~LS~~ 290 (343)
...+.++..+.++.|.+ ...+||++||+.|++.++..|+.++.+|+.+|+ .|.|+||||+. |...+||.||.+
T Consensus 36 ~~~~~~~~~~~~~~i~~---~~~v~F~~~s~~l~~~~~~~L~~la~~l~~~p~~~i~I~Ghtd~~---g~~~~n~~LS~~ 109 (169)
T 3ldt_A 36 KQDIQYVEYGDTRTLII---PTDKYFXFSSPRLNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNV---GSRSHKRKLSQA 109 (169)
T ss_dssp HTTCEEEEETTEEEEEE---ETTTCCC-CCHHHHHHHCHHHHHHHHHHTTCTTSCEEEEEECTTS---CCC--CHHHHHH
T ss_pred CCCCEEEEECCEEEEEE---CCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC---CCHHHHHHHHHH
T ss_conf 49957999699899990---688257089632698899999999999997899579999972898---976675779999
Q ss_pred HHHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCCC--CCCCCEEEEEEECCCC
Q ss_conf 9999999999869996571225630334888898852--1337559999956999
Q gi|254780529|r 291 RAYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPM--NSANRRIDILVEDRQG 343 (343)
Q Consensus 291 RA~aV~~~L~~~Gv~~~ri~~v~G~g~~~P~~~n~t~--~~~NRRVEi~i~~~~~ 343 (343)
||.+|+.||++.|++..||. +.|||+++|+++|++. +++||||||.|...++
T Consensus 110 RA~aV~~~L~~~Gi~~~ri~-~~g~G~~~p~~~~~~~~~~~~NRRVei~i~~~~~ 163 (169)
T 3ldt_A 110 QAETXXTFLWANGIAAKRLK-AEGYGDKNAISDNAIIHGSAQNRRIEIQWFTSEG 163 (169)
T ss_dssp HHHHHHHHHHHTTCCTTTEE-ECCTTCTTSCCCTTTSCGGGGTSEEEEEEECCCC
T ss_pred HHHHHHHHHHHCCCCHHHEE-EEEECCCCCCCCCCCHHHHHHCCCEEEEEEECCC
T ss_conf 99999999998599989989-9997566767999297899854988999996898