HHsearch results for GI: 254780529 and protein with PDBid: 2k1s_A
>2k1s_A Inner membrane lipoprotein YIAD; abbababab, OMPA, alpha beta, palmitate, transmembrane, structural genomics, PSI-2; NMR {Escherichia coli K12}
Probab=99.94 E-value=1.2e-26 Score=195.52 Aligned_cols=120 Identities=27% Similarity=0.370 Sum_probs=110.2
Q ss_pred CCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCCCCCCCCCHHHHHHHH
Q ss_conf 3114511453499997034567455568754683565654436789861278-338987314676678741069999999
Q gi|254780529|r 213 KGVLFETTRTGILISIIDQRNTPMFDKSSSIPLPETIVVLQKIGEVLAHSTE-VISIRGHTDASPFRNIARDNWRLSLDR 291 (343)
Q Consensus 213 ~~~~v~~~~~~i~I~i~d~~~~~lF~~gsa~l~~~~~~~l~~ia~~l~~~~~-~i~IeGHTD~~p~~g~~~~Nw~LS~~R 291 (343)
..+.+...+++++|.+ .+.++|++||+.|++.+...|+.++..|+.+|. .|.|+||||++ |+..+||+||.+|
T Consensus 17 ~~v~v~~~~~~~~l~l---~~~v~F~~~s~~L~~~~~~~L~~ia~~L~~~~~~~i~I~GhtD~~---g~~~~N~~LS~~R 90 (149)
T 2k1s_A 17 TGVSVTRSGDNIILNM---PNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDST---GGHDLNMRLSQQR 90 (149)
T ss_dssp TSCEEEEETTEEEEEE---EHHHHBSSSSSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEECCCT---TCHHHHHHHHHHH
T ss_pred CCCEEEEECCEEEEEC---CCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCC---CCHHHHHHHHHHH
T ss_conf 9967999799999986---874054299722698899999999999964899579999880786---8955736899999
Q ss_pred HHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCCCC--CCCCEEEEEEE
Q ss_conf 9999999998699965712256303348888988521--33755999995
Q gi|254780529|r 292 AYSAYQVLMKSGVSEDRISKISGFAHHRLKIASDPMN--SANRRIDILVE 339 (343)
Q Consensus 292 A~aV~~~L~~~Gv~~~ri~~v~G~g~~~P~~~n~t~~--~~NRRVEi~i~ 339 (343)
|.+|++||+..|++++||. +.|||+++|+++|+++. ++||||||+|.
T Consensus 91 A~~V~~~L~~~Gi~~~rl~-~~g~G~~~P~~~~~~~~~~~~NRRVei~i~ 139 (149)
T 2k1s_A 91 ADSVASALITQGVDASRIR-TQGLGPANPIASNSTAEGKAQNRRVEITLS 139 (149)
T ss_dssp HHHHHHHHHHHTCCGGGEE-EEECTTTCCSSCSSSHHHHHHHSEEEEEEE
T ss_pred HHHHHHHHHHCCCCHHEEE-EEEECCCCCCCCCCCHHHHHHCCCEEEEEE
T ss_conf 9999999998599932599-999867577799929778973597999997