HHsearch results for GI: 254780529 and protein with PDBid: 2zf8_A
>2zf8_A MOTY, component of sodium-driven polar flagellar motor; beta barrel, 2-layer sandwich, flagellum, structural protein; 2.85A {Vibrio alginolyticus}
Probab=99.90 E-value=2.7e-24 Score=179.85 Aligned_cols=105 Identities=21% Similarity=0.285 Sum_probs=96.8
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC--CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEE
Q ss_conf 7455568754683565654436789861278--33898731467667874106999999999999999986999657122
Q gi|254780529|r 234 TPMFDKSSSIPLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKSGVSEDRISK 311 (343)
Q Consensus 234 ~~lF~~gsa~l~~~~~~~l~~ia~~l~~~~~--~i~IeGHTD~~p~~g~~~~Nw~LS~~RA~aV~~~L~~~Gv~~~ri~~ 311 (343)
.++|++||+.|++.++..|++++..|+..|+ .|.|+||||+. |...+||+||.+||.+|+.||+..||+.+||.
T Consensus 163 ~v~F~~gs~~L~~~~~~~L~~ia~~Lk~~p~~~~I~I~GhTD~~---G~~~~N~~LS~~RA~~V~~~L~~~GI~~~rI~- 238 (278)
T 2zf8_A 163 ILHYERQGDQLTKASKKRLSQIADYIRHNQDIDLVLVATYTDST---DGKSASQSLSERRAESLRDYFQSLGLPEDRIQ- 238 (278)
T ss_dssp ECBSSSSSSSBCHHHHHHHHHHHHHHTTCCSCCEEEEEEC----------CCCHHHHHHHHHHHHHHHHHHSCCTTSEE-
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCC---CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEE-
T ss_conf 79848997327999999999999999868996579999882899---97688899999999999999998599979999-
Q ss_pred EEECCCCCCCCCCCCCC--CCCCEEEEEEECCC
Q ss_conf 56303348888988521--33755999995699
Q gi|254780529|r 312 ISGFAHHRLKIASDPMN--SANRRIDILVEDRQ 342 (343)
Q Consensus 312 v~G~g~~~P~~~n~t~~--~~NRRVEi~i~~~~ 342 (343)
+.|||+++|+++|+++. ++||||||.|.+.+
T Consensus 239 v~g~Ge~~Pi~~n~t~~~r~~NRRVeI~l~r~e 271 (278)
T 2zf8_A 239 VQGYGKRRPIADNGSPIGKDKNRRVVISLGRTQ 271 (278)
T ss_dssp CCEEC------------------CEEEECCCCC
T ss_pred EEEECCCCCCCCCCCHHHHHHCCCEEEEEEEEE
T ss_conf 999756577799949789973497999997369