HHsearch results for GI: 254780529 and protein with PDBid: 3cyp_B
>3cyp_B Chemotaxis protein MOTB; bacterial flagellar motor, peptidoglycan binding, bacterial flagellum, flagellar rotation, inner membrane, membrane; 1.60A {Helicobacter pylori} PDB: 3cyq_B* 3imp_B
Probab=99.92 E-value=4e-25 Score=185.37 Aligned_cols=106 Identities=22% Similarity=0.462 Sum_probs=94.9
Q ss_pred CCCCCCCCCC-CCHHHHHHHHHHHHHHHHCCC--CEEEEEEECCCCCC-CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHE
Q ss_conf 7455568754-683565654436789861278--33898731467667-8741069999999999999999869996571
Q gi|254780529|r 234 TPMFDKSSSI-PLPETIVVLQKIGEVLAHSTE--VISIRGHTDASPFR-NIARDNWRLSLDRAYSAYQVLMKSGVSEDRI 309 (343)
Q Consensus 234 ~~lF~~gsa~-l~~~~~~~l~~ia~~l~~~~~--~i~IeGHTD~~p~~-g~~~~Nw~LS~~RA~aV~~~L~~~Gv~~~ri 309 (343)
.++|..|+++ |++.++..|+++|.+|+.+|+ .|.|+||||++|+. +.+.+||+||.+||.+|++||+..|++++||
T Consensus 4 ~~~F~~~~s~~l~~~~~~~L~~ia~~l~~~p~~~~I~I~GhTD~~~~~~~~~~~N~~LS~~RA~~V~~~L~~~Gi~~~ri 83 (138)
T 3cyp_B 4 PFTFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQL 83 (138)
T ss_dssp CEECSSTTCCCCCHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCCCC----CCSHHHHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred CEECCCCCHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 76618997344199899999999999996899707999885289887777617799999999999999999859996436
Q ss_pred EEEEECCCCCCCCCCCCCC--CCCCEEEEEEEC
Q ss_conf 2256303348888988521--337559999956
Q gi|254780529|r 310 SKISGFAHHRLKIASDPMN--SANRRIDILVED 340 (343)
Q Consensus 310 ~~v~G~g~~~P~~~n~t~~--~~NRRVEi~i~~ 340 (343)
. +.|||+++|+++|++.. ++||||||+|..
T Consensus 84 ~-~~g~G~~~P~~~n~~~~~~a~NRRVEI~i~~ 115 (138)
T 3cyp_B 84 S-FSSYGSTNPIAPNDSLENRMKNNRVEIFFST 115 (138)
T ss_dssp E-EEECTTCSCSSCTTSHHHHHHHSEEEEEEEE
T ss_pred E-EEEEECCCCCCCCCCHHHHHHCCCEEEEEEC
T ss_conf 8-8210013757999397899873988999976