BLAST/PSIBLAST alignment of GI: 254780529 and GI: 150395498 at iteration 1
>gi|150395498|ref|YP_001325965.1| flagellar motor protein MotB [Sinorhizobium medicae WSM419] Length = 397
>gi|150027013|gb|ABR59130.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419] Length = 397
 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 196/401 (48%), Gaps = 71/401 (17%)

Query: 4   HGDKNQENDQFIIIKKKVAIDDTPNNLGSWKIVYADFMTVLMAFFLVMWIINATDDDTKK 63
           H  KN+     III ++ A     ++ G WKI YADFMT +MAFFLVMW+INA +++TK 
Sbjct: 7   HNGKNE-----IIIVRRSAGSHEGHHGGGWKIAYADFMTAMMAFFLVMWLINAANEETKA 61

Query: 64  AIEQYFNPFG-KNLMTASKGIFDEQNPPERSSQNKIDLS---IDEHITKNSVDLKIG--- 116
           AI  YFNP    +   A KG+ D    P + +Q +       +D   TK+    K G   
Sbjct: 62  AIAAYFNPVQLTDQKPAEKGLKD----PAKDAQGEKTQQRSKVDGDQTKSGGSAKSGDQL 117

Query: 117 --STNQKKQYQRL-------------------ENNIFYLSNSQQSEHCKNSLTRDSEKGK 155
             ++ ++ +Y                      E NI    +   +E   ++     E  +
Sbjct: 118 TATSGEETKYSDADFFENPYSVLSEIAREVGHEANISVKGDGGAAESGPSTGAAGGEAYR 177

Query: 156 D------LCKSTDLEKSIN------------KEENYFLPPLSKEKIL------------- 184
           D        K  +++ + N              E  F+P  +  K L             
Sbjct: 178 DPFDPDFWTKQVEVKDAGNTVESDVAIAANAAAEEKFVPEETSAKALQNQANAEDRTENE 237

Query: 185 --AMKRKKRLQDLAKKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSSS 242
             A  R++  + L  +I   L G  A  +++G++      G+L++I +Q + PMF   S+
Sbjct: 238 AAAEDRQQEAEALKAEIERELGG-EAGRLLEGLVVAPAEGGLLVTISEQTDAPMFAVGSA 296

Query: 243 IPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMKS 302
           +P  E ++ ++KIG +LA     +++RGHTD  PF++   DNWRLS  RA SAY +L++ 
Sbjct: 297 VPQKELVLAMEKIGRLLAQRPGAVAVRGHTDGRPFKDGTYDNWRLSAARAQSAYYMLVRG 356

Query: 303 GVSEDRISKISGFAHHRLKIASDPMNSANRRIDILVEDRQG 343
           G+ E+R+ +ISGFA  RL++ +DP   ANRRI+IL++  QG
Sbjct: 357 GLKEERVKQISGFADRRLQVPNDPYAPANRRIEILLQSGQG 397