RPSBLAST alignment of GI: 254780529 and protein with PDBid: 3khn
>3khn_A MOTB protein, putative; structural genomics, OMPA-like domain, PSI-2, protein structure initiative; 2.03A {Desulfovibrio vulgaris str} Length = 174
Score = 40.6 bits (94), Expect = 5e-04
Identities = 33/170 (19%), Positives = 71/170 (41%), Gaps = 13/170 (7%)
Query: 178 LSKEKILAMKRKKRLQDLAKKISSTLSGLVADNIVKGVL-FETTRTGILISIIDQRNTPM 236
+S E + + ++ L + ++ + + N V+GV+ I + + + +
Sbjct: 1 MSLETV---RLQRELIEAQRQTYNEMRTYFTVNGVEGVIGAVFDEGVITLRVPSEV---L 54
Query: 237 FDKSSSIPLPETIVVLQKIGEVLAHSTEV-ISIRGHTDA--SPFRNIARDNWRLSLDRAY 293
F + P VL + ++ E I+I+G TD +DNW +S R+
Sbjct: 55 FAPGAVELAPGADRVLATLKDLFIRRREQNINIKGFTDDVQPSANARFKDNWEVSALRSV 114
Query: 294 SAYQVLMKSGVSEDRISKISGFAHHRLKI--ASDPMNSANRRIDILVEDR 341
+ + + +G+ R++ +G SD + NRR++ ++E R
Sbjct: 115 NVLRYFLGAGIEPARLT-ATGLGELDPLFPNTSDENRARNRRVEFVLERR 163