HHsearch alignment for GI: 254780530 and conserved domain: PRK06669
>PRK06669 fliH flagellar assembly protein H; Validated.
Probab=94.63 E-value=0.4 Score=27.51 Aligned_cols=148 Identities=15% Similarity=0.196 Sum_probs=80.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 23335789999999999999999999999999999999999999999999999999999999999999999989999999
Q gi|254780530|r 40 SIADFQKEQDKAYQEGYNKAIHDRELYWKSKNDFIQRSHDNEIADLRELFESSTSKAIAIAVRDSFKCFSDSLECEVIRI 119 (216)
Q Consensus 40 ~~iDveaer~eAya~G~a~a~~e~~~~~e~e~~~l~~~Ha~eLeelR~~~~ee~A~~IA~~i~e~~~~le~~Is~~vArI 119 (216)
T Consensus 104 ~~~~le~a~~eG~eeG~e~G~~ea~~e~~~~i~~~~~i----le~~------------~~~~~~~l~~~E~elv~lal~I 167 (268)
T PRK06669 104 RKRLLEEAKAEGYEEGYEEGFEKAREEFQKLIDELKAI----LEEA------------IDEREEILESSEEEIVELALDI 167 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHH------------HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999----9999------------9999999999899999999999
Q ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHH-------CCCCCCCEEEECCCCCEEEEEEC
Q ss_conf 999987799--999999999999999504687618884888999999984-------58750005640589842899968
Q gi|254780530|r 120 LKSVLDIGL--SRKAAIEFAAVVVDFLKKGDCGKIVIHGPKNLHSLIEEC-------LGEYSSAVCYENADTVEFSTKIF 190 (216)
Q Consensus 120 L~PvL~e~l--~~qAv~~la~~i~~~~~dg~~~~I~V~GP~~L~e~L~~~-------Lg~~~~~i~~~~ad~~Elsv~ig 190 (216)
T Consensus 168 AkkVI~~~~~~~~~i~~~lvk~~l~evk~~~~I~I--~Vnp~Dye~v~e~k~el~~~l~~-~~~i~I~~D~----~l~~G 240 (268)
T PRK06669 168 AKKVIKEISENSKEVALALVKELLKEVKDATDITI--RVNPEDYEYVKEQKDELISLLDS-EAHLKIYEDE----AISKG 240 (268)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEE--EECHHHHHHHHHHHHHHHHHHCC-CCCEEEEECC----CCCCC
T ss_conf 99999999705899999999999997313781899--98888899999848999987457-7776997678----88999
Q ss_pred CCHHHH-------HHHHHHHHHHHHHH
Q ss_conf 200211-------37999999999998
Q gi|254780530|r 191 GSVIKT-------RLESWLSDVKAKIV 210 (216)
Q Consensus 191 etVieT-------RLaaW~~~Lkaav~ 210 (216)
T Consensus 241 gciIeTd~G~IDa~i~tqL~~ike~ll 267 (268)
T PRK06669 241 GCIIETDFGRIDARIDSQLKQLKEKLL 267 (268)
T ss_pred CEEEECCCCEEEHHHHHHHHHHHHHHC
T ss_conf 879966998053009999999999852