RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780530|ref|YP_003064943.1| hypothetical protein CLIBASIA_02085 [Candidatus Liberibacter asiaticus str. psy62] (216 letters) >d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 Score = 26.5 bits (58), Expect = 1.7 Identities = 5/23 (21%), Positives = 13/23 (56%) Query: 52 YQEGYNKAIHDRELYWKSKNDFI 74 Y+ Y ++I+D + +W + + Sbjct: 20 YETKYKQSINDPDTFWGEQGKIL 42 >d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 Score = 25.2 bits (54), Expect = 4.0 Identities = 6/25 (24%), Positives = 12/25 (48%) Query: 50 KAYQEGYNKAIHDRELYWKSKNDFI 74 + YQ + ++I D ++ SK Sbjct: 1 QDYQRLHKESIEDPAKFFGSKATQF 25 >d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]} Length = 579 Score = 25.1 bits (54), Expect = 4.3 Identities = 5/30 (16%), Positives = 12/30 (40%) Query: 73 FIQRSHDNEIADLRELFESSTSKAIAIAVR 102 + + EI +L+ + + AV+ Sbjct: 3 YFTTNKKGEIFELKAELNNEKKEKRKEAVK 32 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.317 0.131 0.363 Gapped Lambda K H 0.267 0.0500 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 752,204 Number of extensions: 33458 Number of successful extensions: 94 Number of sequences better than 10.0: 1 Number of HSP's gapped: 94 Number of HSP's successfully gapped: 7 Length of query: 216 Length of database: 2,407,596 Length adjustment: 82 Effective length of query: 134 Effective length of database: 1,281,736 Effective search space: 171752624 Effective search space used: 171752624 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 51 (24.0 bits)