HHsearch alignment for GI: 254780531 and conserved domain: PRK06819
>PRK06819 flagellin; Validated.
Probab=100.00 E-value=0 Score=487.72 Aligned_cols=368 Identities=20% Similarity=0.226 Sum_probs=234.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97404579999999999999999999999985122368831389999999999999999999999899999999999999
Q gi|254780531|r 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80 (452)
Q Consensus 1 m~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~ 80 (452)
T Consensus 1 m~~IntN~~A~~a~~~L~~~~~~l~ks~~rLSSG~rIn~asDDaAg~aia~~~~~~i~~l~q~~~N~~~~~s~lqtae~a 80 (371)
T PRK06819 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISIAQTTEGA 80 (371)
T ss_pred CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98686369999999999999999999999852216637710148899999999999988999999899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999999999875303776---3035678899999999999863001211001356665432233433222111233
Q gi|254780531|r 81 MSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157 (452)
Q Consensus 81 l~~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~~ 157 (452)
T Consensus 81 L~~i~~iLqRmRELavqAaNgt~s~~DR~~i~~Ei~ql~~ei~~ia~~t~fnG~~ll~g~~~~~~-qvg~~~~~~----- 154 (371)
T PRK06819 81 LNEINNNLQRVRELTVQAQNGSNSASDLDSIQDEINQRLAEIDRVSDQTDFNGVKVLAENTTMSI-QVGANDGET----- 154 (371)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEE-EECCCCCCE-----
T ss_conf 99999999999999997446777767899999999999999999987567888750178875247-632778736-----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 33322222222213543333322111111111223332234544332221111222211222222222111111111111
Q gi|254780531|r 158 NGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237 (452)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (452)
T Consensus 155 ---i~i~~~~--~~~~------------~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 204 (371)
T PRK06819 155 ---IDINLQK--IDSK------------SLGLGSYS----VSGVSGALTSLTDTSVTGVTTTTALDFSDIS--------- 204 (371)
T ss_pred ---EEEEECC--CCCC------------CCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---------
T ss_conf ---9985043--4443------------22455433----3565554211023344332222111122210---------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 01001122210123333443322222332222210000012234444321100123321110000000011111111223
Q gi|254780531|r 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317 (452)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (452)
T Consensus 205 ~~--~~~~~~--------~-----~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 247 (371)
T PRK06819 205 TF--AAGATV--------H-----GIGDVGTD---------GAYADGYVVRYFTTDGKQYKGEVDAT------------- 247 (371)
T ss_pred CC--CCCCCC--------C-----CCCCCCCC---------CCCCCCCEEEECCCCCCCCCCCCCCC-------------
T ss_conf 00--011002--------3-----32210000---------12245520110123443100001234-------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 44443322322233322222100000122334443210000005789999999999999999998789999999999999
Q gi|254780531|r 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397 (452)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~ 397 (452)
T Consensus 248 -~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~al~~iD~Ai~~v~~~Ra~lGA~qNrle~~~~nl~ 317 (371)
T PRK06819 248 -NGKVTF---------ADDANGDPIDDATALEAAAQFSPAGKATASPLETLDDALKQVDGLRSSLGAVQNRFESTVTNLN 317 (371)
T ss_pred -CCCEEE---------ECCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -453000---------0223442000001013433200157789989999999999999999987299999999999899
Q ss_pred HHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 999999973062220258999999999999999999999999720688987525
Q gi|254780531|r 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452)
Q Consensus 398 ~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452)
T Consensus 318 ~~~~nl~aa~s~I~DaD~A~E~t~l~k~qil~Qa~~amLaqANq~~q~vL~Llq 371 (371)
T PRK06819 318 NTVTNLTSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQVPQTVLSLLR 371 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
T ss_conf 999999997532773039999999999999999999999997707789998509