HHsearch alignment for GI: 254780531 and conserved domain: PRK06945
>PRK06945 flgK flagellar hook-associated protein FlgK; Validated.
Probab=96.94 E-value=0.024 Score=31.92 Aligned_cols=79 Identities=11% Similarity=0.187 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999878999999999999999999997306222025899999999999999999999999972068898752
Q gi|254780531|r 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450 (452)
Q Consensus 372 ~~~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~ 450 (452)
T Consensus 571 ~~~y~~~vs~iG~~a~~a~~~~~~q~~l~~~~~~~r~SvSGVnlDEEl~nLikyQqaY~AaArvItt~deMldtLl~i~ 649 (649)
T PRK06945 571 TGAYAQLVNDIGNKASQLKVSSAAQTALLTQITTAQQSVSGVNLDEEAANLLQYQQLYQANAKVIQTASTLFDTLLGIF 649 (649)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999999999999999999999999999997440613999999999999999999999999999999999539