HHsearch alignment for GI: 254780531 and conserved domain: PRK08411

>PRK08411 flagellin; Reviewed.
Probab=100.00  E-value=0  Score=498.90  Aligned_cols=149  Identities=28%  Similarity=0.355  Sum_probs=141.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             74045799999999999999999999999851223688313899999999999999999999998999999999999999
Q gi|254780531|r    2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM   81 (452)
Q Consensus         2 ~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l   81 (452)
T Consensus         3 l~INtNi~alna~r~L~~s~~~l~~sleRLSSGlRINsA~DDAAGLaISerm~sQI~GL~qA~rNanDgISl~QTAEGAL   82 (573)
T PRK08411          3 FRINTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAISNGNDALGILQTADKAM   82 (573)
T ss_pred             CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             27956799999999999999999999987500065566330477899999999998889999986988999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             999999999999875303776---303567889999999999986300121100135666543223343322
Q gi|254780531|r   82 SKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVI  150 (452)
Q Consensus        82 ~~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~  150 (452)
T Consensus        83 ~Ev~~iLqRmRELAVQAAN~tns~~DR~alQ~Ei~qL~~EIdRIa~tT~FNg~kLLdGs~~~~~~qvGa~~~  154 (573)
T PRK08411         83 DEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNFINQEFQIGASSN  154 (573)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCEEECCCCCCCCEEEECCCCC
T ss_conf             999999999999999961468998999999999999999997661104389887026887762288426888