HHsearch alignment for GI: 254780531 and conserved domain: PRK08471
>PRK08471 flgK flagellar hook-associated protein FlgK; Validated.
Probab=97.85 E-value=0.0019 Score=38.73 Aligned_cols=79 Identities=19% Similarity=0.195 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999998789999999999999999999973062220258999999999999999999999999720688987525
Q gi|254780531|r 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452)
Q Consensus 373 ~~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452)
T Consensus 534 ~~y~~lvs~vG~~~~~a~~~~~~~~~~~~~~~~~r~svSGVnlDEE~~nLik~QqaY~AsArvista~em~dtLL~i~~ 612 (612)
T PRK08471 534 EYYRFLTGKIASDTEKNNRINDTNKSLLNSVKKEYQSISGVSTDEELTNLIKFQSSYGAAAKIITTVDQMLDTLLGIKQ 612 (612)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999999999999999999999999999985106039999999999999999999999999999999982449