HHsearch alignment for GI: 254780531 and conserved domain: PRK12688
>PRK12688 flagellin; Reviewed.
Probab=99.67 E-value=2.1e-15 Score=111.72 Aligned_cols=100 Identities=21% Similarity=0.318 Sum_probs=94.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97404579999999999999999999999985122368831389999999999999999999999899999999999999
Q gi|254780531|r 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80 (452)
Q Consensus 1 m~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~ 80 (452)
T Consensus 1 MS~IvLS~avRQNLlSLQsTAdLLATTQsRLssGKKVNtALDNPTNFFTAagLdsRaSdInnLLDGI~NGVQilQAANTG 80 (888)
T PRK12688 1 MSGVVLSNAVRQNLSSLQATADLLATTQSRLSSGKKVNTALDNPTNFFTAASLDSRASDINNLLDGIGNGVQILQAANTG 80 (888)
T ss_pred CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHCCC
T ss_conf 97344178887677777778999988777652366122123687531100123410456777775212255533454036
Q ss_pred HHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999998753037
Q gi|254780531|r 81 MSKAIDVMSTIKNKITAGVE 100 (452)
Q Consensus 81 l~~~~~~l~r~relavqa~n 100 (452)
T Consensus 81 ITsL~kLvDsaKSIAnQALq 100 (888)
T PRK12688 81 ITSLNKLVDSAKSIANQALQ 100 (888)
T ss_pred CHHHHHHHHHHHHHHHHHHH
T ss_conf 06689999989999998765