HHsearch alignment for GI: 254780531 and conserved domain: PRK12718
>PRK12718 flgL flagellar hook-associated protein FlgL; Provisional.
Probab=100.00 E-value=0 Score=383.27 Aligned_cols=147 Identities=12% Similarity=0.126 Sum_probs=141.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 40457999999999999999999999998512236883138999999999999999999999989999999999999999
Q gi|254780531|r 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82 (452)
Q Consensus 3 ~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l~ 82 (452)
T Consensus 2 RISt~~~~~~~~~~~~~~q~~l~~~q~qlssGkri~~psDDPvaa~~~~~l~~~~~~~~qy~~N~~~a~~~L~~~e~~L~ 81 (510)
T PRK12718 2 RLSTALIYQNGLNGVLNQEAAMARLQEQLSSGRRVLTPADDPLAAALAVNVSQTSSMNSNYDANRKQAEQALGAQTNTLQ 81 (510)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 35369999999999999999999999998507866882109999999999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 99999999999875303776---30356788999999999998630012110013566654322334332
Q gi|254780531|r 83 KAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSV 149 (452)
Q Consensus 83 ~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~ 149 (452)
T Consensus 82 ~v~~~l~~~~el~v~a~ngt~s~~dr~aia~El~~~~~~l~~laNs~d~~G~ylFaG~~~~t~Pf~~~~~ 151 (510)
T PRK12718 82 SVVKNMQEMLKRVVEAGNGTMSDADRQALVIALKGAREELVGLANATDGNGQYLFSGYKGFTQPYSFDAA 151 (510)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEECCC
T ss_conf 9999999999999985178889788999999999999999999646587887744673578998313489