Query gi|254780531|ref|YP_003064944.1| flagellin domain-containing protein [Candidatus Liberibacter asiaticus str. psy62] Match_columns 452 No_of_seqs 143 out of 3473 Neff 12.3 Searched_HMMs 39220 Date Sun May 29 23:06:01 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780531.hhm -d /home/congqian_1/database/cdd/Cdd.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 PRK08026 flagellin; Validated 100.0 0 0 506.0 32.5 144 2-146 3-149 (566) 2 PRK13588 flagellin B; Provisio 100.0 0 0 506.1 32.3 449 2-451 3-514 (514) 3 PRK12808 flagellin; Provisiona 100.0 0 0 501.3 32.9 443 3-451 2-460 (460) 4 PRK08411 flagellin; Reviewed 100.0 0 0 498.9 31.8 149 2-150 3-154 (573) 5 PRK13589 flagellin; Provisiona 100.0 0 0 499.0 31.1 149 2-150 3-154 (573) 6 PRK12584 flagellin A; Reviewed 100.0 0 0 497.4 30.4 448 2-450 3-509 (510) 7 PRK12806 flagellin; Provisiona 100.0 0 0 491.5 32.6 445 2-451 3-474 (475) 8 PRK06819 flagellin; Validated 100.0 0 0 487.7 32.1 368 1-451 1-371 (371) 9 PRK08869 flagellin; Reviewed 100.0 0 0 479.7 31.4 373 1-451 2-377 (377) 10 PRK12803 flagellin; Provisiona 100.0 0 0 465.4 30.0 331 3-451 2-335 (335) 11 PRK12717 flgL flagellar hook-a 100.0 0 0 459.8 31.9 146 3-148 2-150 (523) 12 PRK12807 flagellin; Provisiona 100.0 0 0 423.3 30.0 283 3-451 2-287 (287) 13 PRK12805 flagellin; Provisiona 100.0 0 0 422.8 29.8 282 3-451 2-286 (287) 14 PRK06663 flagellar hook-associ 100.0 0 0 419.2 31.9 413 1-451 2-417 (420) 15 PRK08870 flgL flagellar hook-a 100.0 0 0 414.8 31.3 396 3-451 2-401 (403) 16 PRK12687 flagellin; Reviewed 100.0 0 0 416.1 29.9 307 1-451 1-311 (311) 17 PRK12802 flagellin; Provisiona 100.0 0 0 415.9 29.5 277 2-451 3-282 (282) 18 PRK12804 flagellin; Provisiona 100.0 0 0 411.1 30.0 296 3-451 2-307 (307) 19 COG1344 FlgL Flagellin and rel 100.0 0 0 394.4 32.4 352 2-451 1-360 (360) 20 PRK12718 flgL flagellar hook-a 100.0 0 0 383.3 32.5 147 3-149 2-151 (510) 21 PRK07192 flgL flagellar hook-a 100.0 0 0 365.6 28.2 299 3-451 2-303 (305) 22 PRK07701 flgL flagellar hook-a 100.0 0 0 365.1 27.2 294 3-451 2-298 (301) 23 PRK08027 flgL flagellar hook-a 100.0 0 0 341.4 29.0 309 3-451 2-314 (317) 24 PRK08073 flgL flagellar hook-a 100.0 0 0 340.1 27.2 281 3-451 2-285 (287) 25 PRK08913 flgL flagellar hook-a 100.0 0 0 303.2 28.1 298 1-451 2-300 (302) 26 PRK08412 flgL flagellar hook-a 100.0 1.4E-45 0 298.0 29.9 142 3-145 2-146 (777) 27 TIGR02550 flagell_flgL flagell 100.0 2.7E-36 6.8E-41 239.5 24.4 384 3-451 1-391 (393) 28 pfam00669 Flagellin_N Bacteria 100.0 2.2E-36 5.7E-41 240.0 16.9 135 4-138 1-138 (139) 29 PRK06008 flgL flagellar hook-a 100.0 8.5E-34 2.2E-38 224.2 28.7 343 2-451 4-346 (348) 30 pfam07164 consensus 100.0 6.9E-33 1.8E-37 218.7 28.5 342 2-451 4-345 (347) 31 pfam00700 Flagellin_C Bacteria 99.8 2.5E-20 6.3E-25 141.9 10.0 82 365-451 1-82 (84) 32 PRK12688 flagellin; Reviewed 99.7 2.1E-15 5.5E-20 111.7 13.2 100 1-100 1-100 (888) 33 PRK08471 flgK flagellar hook-a 97.8 0.0019 4.7E-08 38.7 26.2 79 373-451 534-612 (612) 34 PRK07521 flgK flagellar hook-a 97.6 0.0046 1.2E-07 36.3 26.2 78 374-451 405-482 (482) 35 PRK08147 flgK flagellar hook-a 97.6 0.0047 1.2E-07 36.3 26.9 77 373-449 470-546 (547) 36 PRK12714 flgK flagellar hook-a 97.5 0.0067 1.7E-07 35.3 30.6 79 373-451 546-624 (624) 37 PRK07191 flgK flagellar hook-a 97.0 0.02 5.2E-07 32.4 24.1 76 374-449 380-455 (456) 38 PRK06945 flgK flagellar hook-a 96.9 0.024 6.2E-07 31.9 30.8 79 372-450 571-649 (649) 39 PRK06665 flgK flagellar hook-a 96.6 0.042 1.1E-06 30.4 29.1 77 372-448 548-624 (628) 40 TIGR02492 flgK_ends flagellar 96.5 0.05 1.3E-06 30.0 10.0 80 370-449 416-495 (495) 41 PRK07739 flgK flagellar hook-a 96.4 0.057 1.4E-06 29.7 25.6 74 374-447 419-492 (500) 42 COG1256 FlgK Flagellar hook-as 95.7 0.12 3E-06 27.7 22.9 81 371-451 472-552 (552) 43 PRK06799 flgK flagellar hook-a 94.9 0.22 5.6E-06 26.0 21.8 75 376-450 357-431 (431) 44 PRK12715 flgK flagellar hook-a 93.5 0.44 1.1E-05 24.2 32.2 80 372-451 570-649 (649) 45 PRK08871 flgK flagellar hook-a 92.8 0.56 1.4E-05 23.6 28.5 77 373-449 549-625 (626) 46 PRK12632 flgC flagellar basal 92.8 0.32 8.2E-06 25.0 5.6 43 409-451 87-129 (130) 47 PRK12782 flgC flagellar basal 92.0 0.47 1.2E-05 24.1 5.5 47 405-451 91-137 (138) 48 PRK05681 flgC flagellar basal 91.8 0.53 1.4E-05 23.7 5.7 47 406-452 93-139 (139) 49 PRK12631 flgC flagellar basal 88.7 1.3 3.3E-05 21.3 5.5 46 406-451 93-138 (138) 50 PRK12629 flgC flagellar basal 88.6 1.3 3.4E-05 21.2 5.5 47 405-451 89-135 (135) 51 PRK12624 flgB flagellar basal 88.4 1.2 3E-05 21.6 5.1 37 412-448 105-141 (143) 52 PRK12622 flgB flagellar basal 88.3 1.1 2.9E-05 21.7 5.0 37 411-447 98-134 (135) 53 PRK06797 flgB flagellar basal 88.0 0.72 1.8E-05 22.9 3.8 26 413-438 99-124 (135) 54 PRK12630 flgC flagellar basal 87.5 1.6 4.2E-05 20.7 5.5 46 406-451 98-143 (143) 55 PRK05683 flgK flagellar hook-a 86.9 1.8 4.5E-05 20.5 30.9 76 373-448 599-674 (676) 56 PRK12621 flgB flagellar basal 85.7 2 5.2E-05 20.2 5.3 35 413-447 97-131 (136) 57 PRK05680 flgB flagellar basal 84.9 2.2 5.6E-05 19.9 5.3 35 412-446 98-132 (137) 58 pfam06429 DUF1078 Domain of un 84.1 2.4 6.1E-05 19.7 5.0 38 412-449 2-39 (39) 59 PRK12619 flgB flagellar basal 83.2 2.6 6.7E-05 19.5 5.0 30 413-442 93-122 (130) 60 PRK12623 flgB flagellar basal 83.2 2.6 6.7E-05 19.5 4.9 35 412-446 95-129 (131) 61 PRK12625 flgB flagellar basal 83.0 2.7 6.8E-05 19.4 5.0 31 413-443 95-125 (132) 62 PRK12692 flgG flagellar basal 82.7 2.7 7E-05 19.4 5.5 40 412-451 223-262 (262) 63 PRK12685 flgB flagellar basal 79.3 3.6 9.2E-05 18.6 5.0 37 411-447 77-113 (116) 64 PRK12691 flgG flagellar basal 79.0 3.7 9.3E-05 18.6 5.5 40 412-451 223-262 (262) 65 PRK07182 flgB flagellar basal 78.8 3.7 9.5E-05 18.6 5.0 37 413-452 111-147 (148) 66 PRK06004 flgB flagellar basal 77.5 3.7 9.6E-05 18.5 4.0 29 411-439 87-115 (126) 67 COG1815 FlgB Flagellar basal b 77.0 4.2 0.00011 18.2 5.1 37 413-452 96-132 (133) 68 PRK06802 flgC flagellar basal 75.9 4.5 0.00011 18.0 5.5 47 405-451 94-140 (141) 69 PRK12620 flgB flagellar basal 75.6 4.6 0.00012 18.0 5.0 34 413-446 95-128 (132) 70 PRK12626 flgB flagellar basal 75.1 4.7 0.00012 17.9 5.2 25 413-437 124-148 (162) 71 PRK12628 flgC flagellar basal 72.5 5.5 0.00014 17.5 5.3 42 408-449 97-138 (140) 72 PRK12636 flgG flagellar basal 67.4 7 0.00018 16.9 5.5 40 412-451 224-263 (263) 73 PRK12627 flgB flagellar basal 59.6 9.8 0.00025 16.0 5.2 30 412-441 90-119 (128) 74 TIGR01395 FlgC flagellar basal 59.4 9.9 0.00025 16.0 3.8 41 411-451 107-147 (147) 75 PRK12693 flgG flagellar basal 58.7 10 0.00026 15.9 5.3 39 412-450 223-261 (261) 76 PRK05682 flgE flagellar hook p 57.4 8.5 0.00022 16.3 2.4 38 412-449 376-413 (414) 77 PRK12641 flgF flagellar basal 54.4 12 0.00031 15.4 5.6 40 412-451 210-249 (252) 78 PRK12640 flgF flagellar basal 53.4 12 0.00032 15.3 5.5 40 412-451 205-244 (246) 79 PRK12694 flgG flagellar basal 51.7 13 0.00034 15.2 4.9 38 412-449 223-260 (260) 80 COG1558 FlgC Flagellar basal b 51.3 13 0.00034 15.1 5.5 47 405-451 91-137 (137) 81 PRK06003 flgB flagellar basal 43.5 18 0.00045 14.4 5.2 37 413-452 90-126 (126) 82 TIGR01146 ATPsyn_F1gamma ATP s 40.4 20 0.00051 14.1 4.6 49 375-423 276-324 (330) 83 PHA00369 H minor spike protein 39.2 21 0.00053 14.0 2.3 61 382-445 177-237 (337) 84 pfam04687 Microvir_H Microviru 38.4 21 0.00054 13.9 2.7 60 382-444 165-224 (310) 85 pfam10498 IFT57 Intra-flagella 37.6 22 0.00056 13.8 13.8 15 415-429 271-285 (355) 86 PRK12816 flgG flagellar basal 37.4 22 0.00056 13.8 5.4 40 412-451 225-264 (264) 87 PRK13424 F0F1 ATP synthase sub 35.8 24 0.0006 13.7 5.1 49 375-423 235-283 (291) 88 PRK05841 flgE flagellar hook p 35.3 20 0.0005 14.1 1.4 40 412-451 566-605 (605) 89 PRK06664 fliD flagellar hook-a 35.0 24 0.00062 13.6 6.1 74 367-451 606-679 (684) 90 PRK12642 flgF flagellar basal 35.0 24 0.00062 13.6 5.5 39 412-450 199-237 (241) 91 PRK13425 F0F1 ATP synthase sub 34.9 24 0.00062 13.6 5.1 49 375-423 235-283 (291) 92 pfam00231 ATP-synt ATP synthas 32.4 27 0.00068 13.3 5.0 49 375-423 234-282 (288) 93 PRK12637 flgE flagellar hook p 32.3 20 0.00052 14.0 1.0 38 412-449 435-472 (473) 94 pfam08898 DUF1843 Domain of un 31.8 27 0.0007 13.3 3.3 39 84-122 12-50 (53) 95 PRK13422 F0F1 ATP synthase sub 30.4 29 0.00074 13.1 4.8 49 375-423 244-292 (298) 96 TIGR03323 alt_F1F0_F1_gam alte 28.2 32 0.0008 12.9 5.0 49 375-423 231-279 (285) 97 COG0224 AtpG F0F1-type ATP syn 26.0 35 0.00088 12.6 4.9 49 375-423 232-280 (287) 98 PRK13874 conjugal transfer pro 25.6 35 0.0009 12.6 7.2 52 67-118 66-117 (233) 99 PRK08425 flgE flagellar hook p 24.5 37 0.00094 12.5 1.5 40 412-451 677-716 (716) 100 COG1749 FlgE Flagellar hook pr 24.3 30 0.00076 13.0 0.7 40 412-451 384-423 (423) 101 PRK08032 fliD flagellar cappin 23.1 39 0.001 12.3 6.8 74 366-450 389-462 (463) 102 PRK13423 F0F1 ATP synthase sub 21.1 43 0.0011 12.1 5.0 49 375-423 231-279 (286) 103 PRK05621 F0F1 ATP synthase sub 20.9 43 0.0011 12.0 5.2 49 375-423 233-281 (287) 104 PRK13426 F0F1 ATP synthase sub 20.9 44 0.0011 12.0 5.0 49 375-423 236-284 (289) 105 PRK06803 flgE flagellar hook p 20.5 44 0.0011 12.0 1.6 37 412-448 360-396 (398) 106 PRK13427 F0F1 ATP synthase sub 20.4 45 0.0011 12.0 4.9 49 375-423 231-279 (286) 107 TIGR02916 PEP_his_kin putative 20.2 45 0.0011 11.9 7.9 77 48-124 492-569 (696) No 1 >PRK08026 flagellin; Validated Probab=100.00 E-value=0 Score=505.98 Aligned_cols=144 Identities=24% Similarity=0.290 Sum_probs=135.1 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 74045799999999999999999999999851223688313899999999999999999999998999999999999999 Q gi|254780531|r 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81 (452) Q Consensus 2 ~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l 81 (452) ..||||+.|++++++|.+.+..|.+++||||||+|||+++|||++++++.|||+++.+++|..||.+++++++|++|++| T Consensus 3 ~~INtNi~Al~a~~~L~~~~~~l~~sleRLSSGlRIN~A~DDAAGlaIs~rm~sQi~GL~qA~rNa~DgiSliQTAEGAL 82 (566) T PRK08026 3 QVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGAL 82 (566) T ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 37966799999999999999999999997510166466321467899999999999889999986988999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC Q ss_conf 999999999999875303776---30356788999999999998630012110013566654322334 Q gi|254780531|r 82 SKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146 (452) Q Consensus 82 ~~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~ 146 (452) +++++||+||||||||++|++ .||++|+.||++|++||++|++.|+|||++||.|+.. ..++.+ T Consensus 83 ~ev~~iLqRmRELAVQAANgTns~~dR~aiQ~Ei~qL~~EIdRIa~~T~FNg~~LL~g~gs-~~~qvG 149 (566) T PRK08026 83 SEINNNLQRIRELTVQAATGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKDGS-MKIQVG 149 (566) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC-EEEEEC T ss_conf 9999999999999998604789999999999999999999998887473898960278885-668850 No 2 >PRK13588 flagellin B; Provisional Probab=100.00 E-value=0 Score=506.13 Aligned_cols=449 Identities=16% Similarity=0.164 Sum_probs=244.8 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 74045799999999999999999999999851223688313899999999999999999999998999999999999999 Q gi|254780531|r 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81 (452) Q Consensus 2 ~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l 81 (452) .+|+||+.|++++++|.+.++.|.+++||||||+|||+++|||++++++.|||+++.+++|..||++++++++|++|++| T Consensus 3 ~~IntNi~Al~a~~~L~~~~~~l~~slerLSSG~RIN~A~DDAAGlaIs~rmrsQi~gl~qA~rNa~dgiSliQTAEGAL 82 (514) T PRK13588 3 FRINTNIAALNAHANGVQNNRDLSSSLEKLSSGLRINKAADDASGMAIADSLRSQAANLGQAIRNANDAIGIVQTADKAM 82 (514) T ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 47956899999999999999999999997521065356430377899999999999889999986888999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 999999999999875303776---30356788999999999998630012110013566654322334332221112333 Q gi|254780531|r 82 SKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN 158 (452) Q Consensus 82 ~~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 158 (452) .++++||+||||||||++|++ .||++|+.|+++|++||++|++.|+|||++||+|+++...++.+............ T Consensus 83 ~Ev~~iLqRmRELAVQAAN~t~s~~dR~alQ~Ei~qL~~EIdrIa~~T~FNg~~LLdGs~~~~~~qvGa~~~~ti~~~~~ 162 (514) T PRK13588 83 DEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELDNIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIG 162 (514) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEECCEECCCCCCCCCEEEECCCCCCEEEEEEC T ss_conf 99999999999999987037898889999999999999999877652623888503677777128853788854788504 Q ss_pred CCCCCCCCCCCCCC-------CCCCCCCCCCCCCC--CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCC------CCC Q ss_conf 33222222222135-------43333322111111--1112233322345443-32221111222211222------222 Q gi|254780531|r 159 GKVQITTIDYYLDP-------ETVLLDSSTDGTER--YGLLDRNHKIKVEPQV-LKDIDVSVYDASGTIST------KKF 222 (452) Q Consensus 159 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~ 222 (452) .............. .............. +............... ................. ... T Consensus 163 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 242 (514) T PRK13588 163 ATSSDKIGHVRFETSSFSGEGMLASAAAQNLTEVGLKFKQVDGVNDYKIETVRISTSAGTGIGALAEIINKFSDTLGVRA 242 (514) T ss_pred CCCCCCCCCEEEEECCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCCEEE T ss_conf 54355434302320243333320000034555410244202454431023457630146406778765304455443047 Q ss_pred CCCCCCCCCCCCCCC----------CCC--------CCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC Q ss_conf 222111111111111----------010--------01122210123-33344332222233222221000001223444 Q gi|254780531|r 223 KLATTSGAWLKAANA----------TFD--------QAKGIATIPVP-LPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283 (452) Q Consensus 223 ~~~~~~~~~~~~~~~----------~~~--------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (452) ............... ... ........... .....+..... ...+................ T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~~~-~~~g~~~~~~~~g~~i~~~~ 321 (514) T PRK13588 243 SYNVMATGGTPIQSGTVRELTINGVEIGTVNDVHKNDADGRLINAINSVKDRTGVEASL-DIQGRINLTSRDGRAISVHG 321 (514) T ss_pred EEEEEECCCCCCCCCCCEEEEECCEEECCCEEEECCCCCCHHHHHHHCCCCCCCEEEEE-ECCCCEEEEECCCCEEEEEC T ss_conf 89986314532234430135541401022101002465402555430323444426896-04660788723772389840 Q ss_pred CC---------CCCCCCCCCCCCCCCCCCCCCCC-----CCCC-CCCCCCCCCCCC-C---------CCCCCCCCCCCCC Q ss_conf 43---------21100123321110000000011-----1111-112234444332-2---------3222333222221 Q gi|254780531|r 284 NS---------DIWVRATTKNSITSDPGYTNSTV-----AKVG-NTHYYVDTESTT-L---------DSRKDLPKEIDSG 338 (452) Q Consensus 284 ~~---------~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~-~---------~~~~~~~~~~~~~ 338 (452) .. ....................... .... ............ . ............. T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 401 (514) T PRK13588 322 ASASGQVFGGGNFAGISGTQHAFVGRLTLTRTDARDIIVSGVNFSHVGFHSAQGVAEYTVNLRAVRGIIDANVASAAGAN 401 (514) T ss_pred CCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHCCCCC T ss_conf 45555000344101024553200021135520442035412333333310134553002320122441024200013420 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHH Q ss_conf 00000122334443210000005789999999999999999998789999999999999999999973062220258999 Q gi|254780531|r 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418 (452) Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e 418 (452) ..................+..++..+|..||.|++.|...|++|||.|||||+.++++....+|+++++|||+|+|||+| T Consensus 402 ~~~~~~~~~~~~~~~~v~t~~~A~~ai~~iD~Ai~~Vs~~Ra~LGA~QNRLe~ti~nL~~~~eNl~aA~SrI~DaDmA~E 481 (514) T PRK13588 402 ANGAQAETNSQGIGAGVTSLKGAMIVMDMAESARKQLDKIRSDLGSVQNQLVSTINNISVTQVNVKAAESQIRDVDFAEE 481 (514) T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 12432212133335565327779999999999999999999877299999999999899999999999888985219999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 999999999999999999999720688987525 Q gi|254780531|r 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 419 ~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) |++|+|.|||+||+++|||||||.||.||+||| T Consensus 482 ma~lTk~qIL~QAg~amLAQANq~pQ~VL~LLq 514 (514) T PRK13588 482 SANFSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514 (514) T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC T ss_conf 999999999999999999998256688998429 No 3 >PRK12808 flagellin; Provisional Probab=100.00 E-value=0 Score=501.31 Aligned_cols=443 Identities=16% Similarity=0.157 Sum_probs=240.1 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 40457999999999999999999999998512236883138999999999999999999999989999999999999999 Q gi|254780531|r 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82 (452) Q Consensus 3 ~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l~ 82 (452) +||||++|++++++|.+.+..|++++||||||+|||+|+|||++++++.|||+++.+++|.+||++++++++|++|++|+ T Consensus 2 ~IntN~~Al~a~~~L~~~~~~l~~s~eRLSSG~RIN~A~DdAAGlaIs~rm~sqi~gl~qa~~Na~dgiS~~qtAEgal~ 81 (460) T PRK12808 2 RINTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAMN 81 (460) T ss_pred EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 66446999999999999999999999985011652664102889999999999998899999989989999999999999 Q ss_pred HHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC-CCC Q ss_conf 99999999999875303776---30356788999999999998630012110013566654322334332221112-333 Q gi|254780531|r 83 KAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR-DDN 158 (452) Q Consensus 83 ~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~-~~~ 158 (452) ++++||+|||||+||++|++ .||++|+.||++|++||++|+++|+|||++||+|+++...++........... ... T Consensus 82 ev~~iLqRmReLAVQAANgTns~~DR~aiQ~Ei~qL~~EIdrIa~~T~fNg~~LLdGs~~~~~~~~~~~~~~~~~i~i~~ 161 (460) T PRK12808 82 SVSNILLRMRDLANQSANGTNTDKNQAALQKEFAELQKQIDYIADNTQFNDKNLLDGSNSSIAIQTLDSSDGGKQIGIDL 161 (460) T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCCCEEEEEC T ss_conf 99999999999999861566887889999999999999999998738568876005778750267412678760686412 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 33222222222135433333221111111112233322345443322211112222112222222221111111111110 Q gi|254780531|r 159 GKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238 (452) Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (452) .............................+..... ...... .................................. T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (460) T PRK12808 162 KSASLEALGINNLSIGANGNGLAKATELAGVADDT-AANASA----AAAKKIDDTTGDTDVKRDAAKVKAYTKQYKALKA 236 (460) T ss_pred CCCCHHHCCCCCCEECCCCCCCCCEEEEECCCCCC-CCCCCH----HHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 32320102555300013233333112420201321-133311----1201013333432002333211000001121000 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC-----------CCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCC Q ss_conf 10011222101233334433222-----------22332222210000012234444321100123321110-0000000 Q gi|254780531|r 239 FDQAKGIATIPVPLPAAPAAPNT-----------TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS-DPGYTNS 306 (452) Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 306 (452) ..................+.... ...................................... ....... T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (460) T PRK12808 237 ALDAKDTGLIDDAKKLVDGANTLLNAQAIKKAEETAAKATLTTDITAATLVDKYSDAKSDATTDTRAKAYLDAKAAYDKV 316 (460) T ss_pred CCCCCCCCCCCCCHHCCCCCCEEEECCCCCCCCEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHEECCC T ss_conf 02441111123201101332102102233210000011222444421011002223444344543000000000000023 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 11111111223444433223222333222221000001223344432100000057899999999999999999987899 Q gi|254780531|r 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386 (452) Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~ 386 (452) ............................... ..................+...+..+|..||.||+.|...|++|||.| T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~t~~~A~~Ai~~ID~AI~~v~~~Ra~lGA~q 395 (460) T PRK12808 317 KGSMNSKDVTKLSAAIDRFSKDDASGDAAEV-LVAKGDAAKAATTNGTTSTATDSLSAVKAIDEALKTIADNRATLGATL 395 (460) T ss_pred CCCCCCCCCEEECCHHCCCCCCCCCCHHHHH-HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 5654432110110101010124555214555-665212100122454421155599999999999999999999881899 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 99999999999999999973062220258999999999999999999999999720688987525 Q gi|254780531|r 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 387 nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) ||||+.++++....+|+++++|||+|+|||+||++|+|.|||+||+++|||||||.||.||+||| T Consensus 396 NRLe~~i~nL~~~~eN~~aa~SrI~DaDmA~E~a~ltk~qILqQAgtamLAQANq~pq~vL~LLq 460 (460) T PRK12808 396 NRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 460 (460) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC T ss_conf 99999999999999999997667660659999999999999999999999996517478998419 No 4 >PRK08411 flagellin; Reviewed Probab=100.00 E-value=0 Score=498.90 Aligned_cols=149 Identities=28% Similarity=0.355 Sum_probs=141.5 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 74045799999999999999999999999851223688313899999999999999999999998999999999999999 Q gi|254780531|r 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81 (452) Q Consensus 2 ~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l 81 (452) .+||||+.+++++++|.+.+..|.+++||||||+|||+++|||++++++.|||++|.+++|..||.+++++.+|++|++| T Consensus 3 l~INtNi~alna~r~L~~s~~~l~~sleRLSSGlRINsA~DDAAGLaISerm~sQI~GL~qA~rNanDgISl~QTAEGAL 82 (573) T PRK08411 3 FRINTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAISNGNDALGILQTADKAM 82 (573) T ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 27956799999999999999999999987500065566330477899999999998889999986988999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC Q ss_conf 999999999999875303776---303567889999999999986300121100135666543223343322 Q gi|254780531|r 82 SKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVI 150 (452) Q Consensus 82 ~~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~ 150 (452) .+++++|+|||||+||++|++ .||++|+.||++|++||++|++.|+|||++||+|++....++.+.... T Consensus 83 ~Ev~~iLqRmRELAVQAAN~tns~~DR~alQ~Ei~qL~~EIdRIa~tT~FNg~kLLdGs~~~~~~qvGa~~~ 154 (573) T PRK08411 83 DEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNFINQEFQIGASSN 154 (573) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCEEECCCCCCCCEEEECCCCC T ss_conf 999999999999999961468998999999999999999997661104389887026887762288426888 No 5 >PRK13589 flagellin; Provisional Probab=100.00 E-value=0 Score=498.99 Aligned_cols=149 Identities=28% Similarity=0.347 Sum_probs=141.7 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 74045799999999999999999999999851223688313899999999999999999999998999999999999999 Q gi|254780531|r 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81 (452) Q Consensus 2 ~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l 81 (452) .+||||+.+++++++|.+.++.|.++.||||||+|||+++|||+++++++|||++|.+++|..||.+++++.+|++|++| T Consensus 3 l~INtNi~alna~rnL~~~~~~l~~sleRLSSGlRINsA~DDAAGLaISermrsQI~GL~qA~rNAnDgISliQTAEGAL 82 (573) T PRK13589 3 FRINTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQAINNGNDAIGILQTADKAM 82 (573) T ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 37956899999999999999999999987510065456330467889999999998889999984998999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC Q ss_conf 999999999999875303776---303567889999999999986300121100135666543223343322 Q gi|254780531|r 82 SKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVI 150 (452) Q Consensus 82 ~~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~ 150 (452) .+++++|+|||||+||++|++ .||++|+.||++|++||++|++.|+|||++||+|+++...++.+.... T Consensus 83 ~Ev~~iLqRmRELAVQAAN~tns~~DR~alQ~Ei~qL~~EIdRIa~tT~FNg~kLLdGs~~~~~~qvGa~~~ 154 (573) T PRK13589 83 DEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNFINQEFQIGASSN 154 (573) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCEEEECCCCCCCEEEECCCCC T ss_conf 999999999999999970468998999999999999999996661216489998106887771388426888 No 6 >PRK12584 flagellin A; Reviewed Probab=100.00 E-value=0 Score=497.36 Aligned_cols=448 Identities=16% Similarity=0.167 Sum_probs=243.8 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 74045799999999999999999999999851223688313899999999999999999999998999999999999999 Q gi|254780531|r 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81 (452) Q Consensus 2 ~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l 81 (452) .+||||+.|++++++|.+.+..|+++.||||||+|||+++|||++++++.|||+++.+++|..||++++++++|++|++| T Consensus 3 ~~INtNi~Alna~~~L~~~~~~ls~sleRLSSGlRIN~AaDDAAGlaIserm~sQI~gL~qA~rNa~DgiSliQTAEGAL 82 (510) T PRK12584 3 FQVNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASSLGQAIANTNDGMGIIQVADKAM 82 (510) T ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 37965599999999999989999999987533266466430666889999999999889999884887999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 999999999999875303776---30356788999999999998630012110013566654322334332221112333 Q gi|254780531|r 82 SKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN 158 (452) Q Consensus 82 ~~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 158 (452) .++++||+||||||||++|++ .||++|+.|+++|++||++|++.|+|||++||+|++....++.+............ T Consensus 83 ~ev~~iLqRmRELAVQAAN~tns~~dR~aiQ~Ei~qL~~EIdRIa~~T~FNg~~LLdGs~~~~~~qvGa~~~~~i~~~i~ 162 (510) T PRK12584 83 DEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLDNIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIG 162 (510) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCEECCCCCCCCCEEEECCCCCCEEEEECC T ss_conf 99999999999999986038898889999999999999998566231657888622677787307755788855887435 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC--------CCCCCCCCCCCCCCCCCCCCCC-------CCCCCCCCCCCCCCCCCCCC Q ss_conf 33222222222135433333221--------1111111122333223454433-------22211112222112222222 Q gi|254780531|r 159 GKVQITTIDYYLDPETVLLDSST--------DGTERYGLLDRNHKIKVEPQVL-------KDIDVSVYDASGTISTKKFK 223 (452) Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 223 (452) ....................... .+.................... .................... T Consensus 163 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~dg~~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 242 (510) T PRK12584 163 STTSDKIGQVRIATGALITASGDISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSDV 242 (510) T ss_pred CCCCCCCCCEEEECCCEEECCCCEEEEEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEECCC T ss_conf 45454444234302531211440355542135644201200466404675136788765134544330456777740221 Q ss_pred CCCCCCC-CCCCCCCCCCC----CC--CCCCCCCCCC---CCCCCCCCCCCCCCCCCCCHHC-----CCCCCCCCCCCCC Q ss_conf 2211111-11111110100----11--2221012333---3443322222332222210000-----0122344443211 Q gi|254780531|r 224 LATTSGA-WLKAANATFDQ----AK--GIATIPVPLP---AAPAAPNTTSGTSGSKSPSVAA-----SATYIRMGNSDIW 288 (452) Q Consensus 224 ~~~~~~~-~~~~~~~~~~~----~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 288 (452) ....... ........... .. .......... ...+.................. ............. T Consensus 243 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~tg~~a~~~~~g~~~~~~~~g~~i~~~~~~~~~~~~~~~ 322 (510) T PRK12584 243 AVQSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLRSTDGRGIEIKTDSVSNGPSALT 322 (510) T ss_pred EECCCCCEEEEECCEEEEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCEEE T ss_conf 00135310232034133101110135651467765312234543168851567167763157524875124445642157 Q ss_pred CCCC-----CCCCCCCCC------CCCCCCCCCCCCC--CCCCCCCCCC-------------CCCCCCCCCCCCCCCCCC Q ss_conf 0012-----332111000------0000011111111--2234444332-------------232223332222210000 Q gi|254780531|r 289 VRAT-----TKNSITSDP------GYTNSTVAKVGNT--HYYVDTESTT-------------LDSRKDLPKEIDSGYSMV 342 (452) Q Consensus 289 ~~~~-----~~~~~~~~~------~~~~~~~~~~~~~--~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~ 342 (452) .... ......... ............. .......... ............. .... T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 401 (510) T PRK12584 323 MVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFTAIGFGESQVAETTVNLRDVTGNFNANVKSASGA-NYNA 401 (510) T ss_pred EECCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCHHHHCCC-CCCC T ss_conf 741541002343332303665314532134421444433203202565420234431122355434320110255-5321 Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHH Q ss_conf 01223344432100000057899999999999999999987899999999999999999999730622202589999999 Q gi|254780531|r 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422 (452) Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l 422 (452) ..............+..++..+|..||.|++.|...|++|||.|||||+.+++|....+|+++++|||+|+|||+||++| T Consensus 402 ~~~~~~~~~~~~v~t~~~A~~ai~~iD~AI~~V~~~Ra~LGA~QNRLe~ti~NL~~~~eNltaA~SrI~DaD~A~Ema~~ 481 (510) T PRK12584 402 VIASGNQSLGSGVTTLRGAMVVIDIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANF 481 (510) T ss_pred HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 00135542355543377799999999999999999997664899989999988999999999998889853089999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9999999999999999972068898752 Q gi|254780531|r 423 SALQTQQQLAVQALSIVNNSTARILSLF 450 (452) Q Consensus 423 ~~~q~~~Qaa~~~laqan~~~~~vL~L~ 450 (452) +|.|||+||+++|||||||.||.||+|| T Consensus 482 tk~qIL~QAgtamLAQANq~pQ~VL~LL 509 (510) T PRK12584 482 NKNNILAQSGSYAMSQANTVQQNILRLL 509 (510) T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHCC T ss_conf 9999999999999998617668898622 No 7 >PRK12806 flagellin; Provisional Probab=100.00 E-value=0 Score=491.50 Aligned_cols=445 Identities=19% Similarity=0.198 Sum_probs=246.2 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 74045799999999999999999999999851223688313899999999999999999999998999999999999999 Q gi|254780531|r 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81 (452) Q Consensus 2 ~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l 81 (452) .+|+||+.|++++++|++.++.|.+++||||||+|||+|+|||++++++.|||+++.+++|.+||.+++++++|++|++| T Consensus 3 l~IntN~~Al~a~~~L~~~~~~l~~s~erLSSG~rIN~AaDDaAGlaIs~~m~aqi~gl~qa~~N~~dgiSl~qtAegAL 82 (475) T PRK12806 3 QVINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQAVRNANDGISLAQVAEGAM 82 (475) T ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 18966599999999999999999999997430276256530378999999999999889999998998999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 999999999999875303776---30356788999999999998630012110013566654322334332221112333 Q gi|254780531|r 82 SKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN 158 (452) Q Consensus 82 ~~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 158 (452) .+++++|+|||||+||++|++ .||++|+.||++|++||++|+++|+|||++||+|++....++.+........... T Consensus 83 ~ev~~iLqRmReLAvQAaNgTn~~~DR~aiq~Ei~qL~~eIdrIa~~T~fNg~~LLdGs~~~~~~qvG~~~~~~i~~~~- 161 (475) T PRK12806 83 QETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSELERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFSI- 161 (475) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEECCEEEECCCCCCCEEEECCCCCCEEEEEE- T ss_conf 9999999999999998616888778899999999999999987865262688874136777721675378885689961- Q ss_pred CCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCC-----CCCC Q ss_conf 332222222-2213543333322111111111223332234544332------221111222211222222-----2221 Q gi|254780531|r 159 GKVQITTID-YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK------DIDVSVYDASGTISTKKF-----KLAT 226 (452) Q Consensus 159 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-----~~~~ 226 (452) +.+...... ............. ....................... ...... ........... .... T Consensus 162 ~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 239 (475) T PRK12806 162 GSIKASSIGGIATATGTEVAGAA-ATDITIAIGGGAATSINSSANFTGALNGQDATSAY-AKAAAINDAGIGGLSVTAST 239 (475) T ss_pred CCCCCCCCCCEEEECCCEECCCC-CCEEEEEECCCCCEEECCCCEEEEECCCCCCHHHH-HHHHHCCCCCCCCEEEEEEC T ss_conf 44311222550110231102443-20146750465311102333023102454301344-33211023454533565303 Q ss_pred CCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 1111111----111101001122210123333443322222332222210000012234444321100123321110000 Q gi|254780531|r 227 TSGAWLK----AANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302 (452) Q Consensus 227 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (452) ....... .....+................. ...................................+..+..... T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~i~~~~~ 317 (475) T PRK12806 240 SGTQAVGAIGGTAGDTYNLTINGVAIYTNLNVAT--ALTNSDLRDAINGVSNQTGVVASLNGGNMTLTAADGRNITVTES 317 (475) T ss_pred CCCEEEEECCCCCCCCEEEEECCEEEEECCCCCC--CCCCHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCEEEEEC T ss_conf 4421321023455652133312402441132000--23422688875212333414887136606898405641588503 Q ss_pred CCCCCCC--CCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH Q ss_conf 0000111--1111122344443------3223222333222221000001223344432100000057899999999999 Q gi|254780531|r 303 YTNSTVA--KVGNTHYYVDTES------TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374 (452) Q Consensus 303 ~~~~~~~--~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~ 374 (452) ....... .........+... ..................................+..++..+|..||.|+++ T Consensus 318 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~g~~~idv~t~~~A~~Ai~~ID~AI~~ 397 (475) T PRK12806 318 GTGFTAGTDGLTVTGGAFDGALRGTLSISAVDTIAIGGTVANIGLSANISKDTVGIDSLDVSTASGAQTAIKRIDAALNS 397 (475) T ss_pred CCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCEECCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH T ss_conf 54200245431320454344113301111221010154010012223344444453334454377799999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 99999998789999999999999999999973062220258999999999999999999999999720688987525 Q gi|254780531|r 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 375 v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) |...|++|||.|||||+.++++....+|+++++|||+|+|||+||++|+|+|||+||+++|||||||.||.||+||. T Consensus 398 V~~~Ra~lGA~qNRLe~~i~nL~~~~eN~~aA~SrI~DaDmA~E~s~ltk~qILqQA~~amLAQANq~pQ~VL~LL~ 474 (475) T PRK12806 398 VNSNRANMGALQNRFESTIANLQNVSDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLLG 474 (475) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC T ss_conf 99999987089999999999999999999997546450229999999999999999999999996507689998608 No 8 >PRK06819 flagellin; Validated Probab=100.00 E-value=0 Score=487.72 Aligned_cols=368 Identities=20% Similarity=0.226 Sum_probs=234.2 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 97404579999999999999999999999985122368831389999999999999999999999899999999999999 Q gi|254780531|r 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80 (452) Q Consensus 1 m~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~ 80 (452) |++|+||++|++++++|++.+.+|+|+|+||||||||++|+|||++++++.+|++++.+++||+||+.++++||+++|++ T Consensus 1 m~~IntN~~A~~a~~~L~~~~~~l~ks~~rLSSG~rIn~asDDaAg~aia~~~~~~i~~l~q~~~N~~~~~s~lqtae~a 80 (371) T PRK06819 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISIAQTTEGA 80 (371) T ss_pred CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 98686369999999999999999999999852216637710148899999999999988999999899999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 9999999999999875303776---3035678899999999999863001211001356665432233433222111233 Q gi|254780531|r 81 MSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157 (452) Q Consensus 81 l~~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~~ 157 (452) |.++.++|+|||||+||++|++ .||++|+.|+++|++||.+|+++++|||++||.|...... ..+...... T Consensus 81 L~~i~~iLqRmRELavqAaNgt~s~~DR~~i~~Ei~ql~~ei~~ia~~t~fnG~~ll~g~~~~~~-qvg~~~~~~----- 154 (371) T PRK06819 81 LNEINNNLQRVRELTVQAQNGSNSASDLDSIQDEINQRLAEIDRVSDQTDFNGVKVLAENTTMSI-QVGANDGET----- 154 (371) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEE-EECCCCCCE----- T ss_conf 99999999999999997446777767899999999999999999987567888750178875247-632778736----- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 33322222222213543333322111111111223332234544332221111222211222222222111111111111 Q gi|254780531|r 158 NGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237 (452) Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (452) +...... .... ..+..... ............................... T Consensus 155 ---i~i~~~~--~~~~------------~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 204 (371) T PRK06819 155 ---IDINLQK--IDSK------------SLGLGSYS----VSGVSGALTSLTDTSVTGVTTTTALDFSDIS--------- 204 (371) T ss_pred ---EEEEECC--CCCC------------CCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------- T ss_conf ---9985043--4443------------22455433----3565554211023344332222111122210--------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 01001122210123333443322222332222210000012234444321100123321110000000011111111223 Q gi|254780531|r 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317 (452) Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (452) .. ...... . ........ .......................... T Consensus 205 ~~--~~~~~~--------~-----~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 247 (371) T PRK06819 205 TF--AAGATV--------H-----GIGDVGTD---------GAYADGYVVRYFTTDGKQYKGEVDAT------------- 247 (371) T ss_pred CC--CCCCCC--------C-----CCCCCCCC---------CCCCCCCEEEECCCCCCCCCCCCCCC------------- T ss_conf 00--011002--------3-----32210000---------12245520110123443100001234------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 44443322322233322222100000122334443210000005789999999999999999998789999999999999 Q gi|254780531|r 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397 (452) Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~ 397 (452) ...... ...........................+..+|..||.++++|...|+++||+|||||+..+++. T Consensus 248 -~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~al~~iD~Ai~~v~~~Ra~lGA~qNrle~~~~nl~ 317 (371) T PRK06819 248 -NGKVTF---------ADDANGDPIDDATALEAAAQFSPAGKATASPLETLDDALKQVDGLRSSLGAVQNRFESTVTNLN 317 (371) T ss_pred -CCCEEE---------ECCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf -453000---------0223442000001013433200157789989999999999999999987299999999999899 Q ss_pred HHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 999999973062220258999999999999999999999999720688987525 Q gi|254780531|r 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 398 ~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) ...+|+++++|+|+|+|||+|+++|+|+||++||+++||+||||.||+||+||| T Consensus 318 ~~~~nl~aa~s~I~DaD~A~E~t~l~k~qil~Qa~~amLaqANq~~q~vL~Llq 371 (371) T PRK06819 318 NTVTNLTSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQVPQTVLSLLR 371 (371) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC T ss_conf 999999997532773039999999999999999999999997707789998509 No 9 >PRK08869 flagellin; Reviewed Probab=100.00 E-value=0 Score=479.73 Aligned_cols=373 Identities=19% Similarity=0.251 Sum_probs=240.1 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 97404579999999999999999999999985122368831389999999999999999999999899999999999999 Q gi|254780531|r 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80 (452) Q Consensus 1 m~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~ 80 (452) ..||+||+.|++++++|++.++.|.|+++||||||||++|+|||++++++++||+++.+++||.+|+.++++||+++|++ T Consensus 2 ~~~IntN~~a~~a~~~L~~~~~~l~~s~~rLSSG~rIn~asDDaag~aia~~l~~~i~~l~q~~~N~~~~~s~lqtae~a 81 (377) T PRK08869 2 AVNVNTNVSAMTAQRNLNGATSALNQSMERLSSGKRINSAKDDAAGLQISNRLTTQIRGLDVAVRNANDGISIAQTAEGA 81 (377) T ss_pred CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 85782619999999999999999999999861106647820168999999999999999999999899999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 9999999999999875303776---3035678899999999999863001211001356665432233433222111233 Q gi|254780531|r 81 MSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157 (452) Q Consensus 81 l~~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~~ 157 (452) |.++.++|+|||||+||++|++ .||++|+.|+++|++||.+|++.++|||+|||.|.++...++.+......+.... T Consensus 82 L~~i~~iL~RmrELavqaaNgt~s~~DR~ai~~Ei~~L~~ei~~ian~t~fnG~~Ll~G~~~~~~~q~g~~~g~~~~~~~ 161 (377) T PRK08869 82 MNETTNILQRMRDLSLQSANGSNSASDRQALQEEVTALNDELNRIAETTSFGGTKLLNGSFGTKSFQIGANSGEAVSLDL 161 (377) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEECCCCCCCEEEEEE T ss_conf 99999999999999997634655555799999999999999999998655488774247776602621467884599850 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 33322222222213543333322111111111223332234544332221111222211222222222111111111111 Q gi|254780531|r 158 NGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237 (452) Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (452) ... .......+ .............+.... ........... T Consensus 162 ~~~----------~~~~~~~g----~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~--------- 201 (377) T PRK08869 162 SNM----------RSDAKIMG----GASYVAEEGKDKDWTVSG-----------------DNSGLTLSFTD--------- 201 (377) T ss_pred CCC----------CHHHHCCC----CEEEECCCCCCCCCEECC-----------------CCCCEEEEEEC--------- T ss_conf 432----------01121367----514522554455420014-----------------66532687403--------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 01001122210123333443322222332222210000012234444321100123321110000000011111111223 Q gi|254780531|r 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317 (452) Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (452) .........+.................. .......................... T Consensus 202 ---~~~~~~~~~i~~~~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 255 (377) T PRK08869 202 ---KGGEAQSININAKAGDDIEELATYINGQ------TDAVGASVTEDGKLQLFAANSSATGD----------------- 255 (377) T ss_pred ---CCCCCEEEEEECCCCCHHHHHHHHHCCC------CCCEEEEECCCCEEEEEECCCCCCCC----------------- T ss_conf ---6665225787325551378888875155------54313564157516886125544443----------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 44443322322233322222100000122334443210000005789999999999999999998789999999999999 Q gi|254780531|r 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397 (452) Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~ 397 (452) ........... ................+..+++.+|..||.|+++|...|+++||++||||+..++++ T Consensus 256 -------~~~~~~~~~~~-----~~~~~~~~~~~~~d~tt~~~a~~ai~~iD~Ai~~v~~~ra~lGA~~NrLe~~~~~l~ 323 (377) T PRK08869 256 -------LSFSGALAAEL-----GLGNKGPVTVDDLDISTVGGAQQAVAVIDAALKYVDSHRADLGAFQNRFTHAINNLQ 323 (377) T ss_pred -------CCCCCHHHHHH-----CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf -------00031022221-----124443111221001225339999999999999999999987289999999999999 Q ss_pred HHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 999999973062220258999999999999999999999999720688987525 Q gi|254780531|r 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 398 ~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) ...+|+++++|+|+|+|||+|+++|+|+||++||+++||+||||.||+||+||| T Consensus 324 ~~~~n~~aa~S~I~DaD~A~E~t~l~k~qil~Qa~~amLaqANq~~q~vL~Llq 377 (377) T PRK08869 324 NISENLSASNSRIKDTDFAKETTELTKAQILQQAGTSILAQAKQAPQSALSLLQ 377 (377) T ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCC T ss_conf 999999987423351319999999999999999999999997317679998409 No 10 >PRK12803 flagellin; Provisional Probab=100.00 E-value=0 Score=465.45 Aligned_cols=331 Identities=18% Similarity=0.187 Sum_probs=230.2 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 40457999999999999999999999998512236883138999999999999999999999989999999999999999 Q gi|254780531|r 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82 (452) Q Consensus 3 ~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l~ 82 (452) .||||+++++++++|++.++.|.++++||||||||++|+|||++++++.||++++.+++|+.||++++++||+++|++|. T Consensus 2 ~IntN~~a~~A~~~l~~~~~~l~~s~~rLSSG~RInsa~DDaAGlaIa~~l~sqi~~l~qa~rNa~daiS~lqtaegal~ 81 (335) T PRK12803 2 IINHNTSAINASRNNSINAANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKAINFIQTTEGNLN 81 (335) T ss_pred EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 67267999999999999999999999985100664774215889999999999999899998539889999999999999 Q ss_pred HHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 99999999999875303776---303567889999999999986300121100135666543223343322211123333 Q gi|254780531|r 83 KAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159 (452) Q Consensus 83 ~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 159 (452) ++.++|+|||||+|||+|++ .||.+|+.||++|++||.+|++++.|||++||+|................. T Consensus 82 ei~~iLqRmrELavqAaNgT~s~~dr~~i~~E~~qL~~eI~~Ia~~T~fNg~~ll~g~~~~~~~~~~~~~~~~~------ 155 (335) T PRK12803 82 EVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSAAQNVRTAEELGMQP------ 155 (335) T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCC------ T ss_conf 99999999999999853678998999999999999999999999848368861446765332311176506542------ Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 32222222221354333332211111111122333223454433222111122221122222222211111111111101 Q gi|254780531|r 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239 (452) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (452) ...... ..+........ ..... +.... T Consensus 156 -------------~~~~~~------~~~~~~~~~~t----------~~~~~----g~~~~-------------------- 182 (335) T PRK12803 156 -------------AKINTP------ASLSGSQASWT----------LRVHV----GANQD-------------------- 182 (335) T ss_pred -------------CCCCCC------CCCCCCCCCEE----------EEEEE----CCCCC-------------------- T ss_conf -------------235652------21135555236----------89986----37776-------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 00112221012333344332222233222221000001223444432110012332111000000001111111122344 Q gi|254780531|r 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319 (452) Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (452) ........... ........+ .... .. ... .... ....... T Consensus 183 ------~~~~~~~~~~~--~~~~~~~~g--~~~~-------~~--~~~--------~~~~-~~~~~~~------------ 222 (335) T PRK12803 183 ------EAIAVNIYAAN--VANLFSGEG--AQQA-------AP--VQE--------GAQQ-EGAQAAP------------ 222 (335) T ss_pred ------CEEEEEEEECH--HHHHHCCCC--CHHH-------HH--HHC--------CCCC-CCCCCCC------------ T ss_conf ------33788532003--666541455--2011-------11--100--------1100-1100012------------ Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 44332232223332222210000012233444321000000578999999999999999999878999999999999999 Q gi|254780531|r 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399 (452) Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~~~ 399 (452) .... ... ...........+...+..+|..||.|+++|...|+++||++||||+..+++... T Consensus 223 --~~~~--------~~~---------~~g~~~~~~i~t~~~A~~ai~~iD~Ai~~v~~~Ra~lGA~qNRLe~~~~nl~~~ 283 (335) T PRK12803 223 --APAA--------APA---------QGGVNSPVNVTTTVDANMSLAKIENAIRMISDQRANLGAFQNRLESIKASTEYA 283 (335) T ss_pred --CCCC--------CCC---------CCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf --2000--------001---------356545430000865999999999999999999998708999999999899999 Q ss_pred HHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 9999973062220258999999999999999999999999720688987525 Q gi|254780531|r 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 400 ~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) .+|+++++|+|+|+|||+|+++|+|.|||+|++++||+|||+.||.||+||| T Consensus 284 ~~Nl~aa~SrI~DaD~A~E~~~ltk~qil~Qa~~amLaQAN~~pq~vL~LLq 335 (335) T PRK12803 284 IENLKASYAQIKDATMTDEVVASTTNSILTQSAMAMIAQANQVPQYVLSLLR 335 (335) T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC T ss_conf 9999997531563059999999999999999999999997617689998409 No 11 >PRK12717 flgL flagellar hook-associated protein FlgL; Provisional Probab=100.00 E-value=0 Score=459.84 Aligned_cols=146 Identities=19% Similarity=0.242 Sum_probs=140.2 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 40457999999999999999999999998512236883138999999999999999999999989999999999999999 Q gi|254780531|r 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82 (452) Q Consensus 3 ~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l~ 82 (452) ||+||+++.+.+++|++.+++|.++||||||||||++|||||++++++++|+.++.+++||.||++++++||+++|++|+ T Consensus 2 RIs~~~~~~~~~~nl~~~~~~l~~~~eqLSSGkrIn~asDDpag~a~~~~l~~~i~~l~Q~~~N~~~a~s~lq~aE~aL~ 81 (523) T PRK12717 2 RISTAQFYESSAANYQRNYSNLVKTQEEISSGIRINTAADDPVGAARLLQLEQQQAMLDQYKGNITTIKNSLGQEETTLN 81 (523) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 16369999999999999999999999987326866881139999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC Q ss_conf 99999999999875303776---3035678899999999999863001211001356665432233433 Q gi|254780531|r 83 KAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148 (452) Q Consensus 83 ~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~ 148 (452) +++++|+|||||||||+|++ .||++|+.|+++|++||++|+|.++|||+|||+|+.....++.... T Consensus 82 ~v~~iLqr~reLavQaaNgt~s~~DR~ai~~Ei~ql~~el~~iaNtt~~nG~~lf~G~~~~~~pf~~~~ 150 (523) T PRK12717 82 SINDVLQRARELAVSAGNGGLTDADRKAIASELKQIEAQLLGLMNSRDANGQYLFAGSKSDTPPYVRNA 150 (523) T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEECC T ss_conf 999999999999998716899988999999999999999998860455576267457666766404458 No 12 >PRK12807 flagellin; Provisional Probab=100.00 E-value=0 Score=423.33 Aligned_cols=283 Identities=21% Similarity=0.313 Sum_probs=226.7 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 40457999999999999999999999998512236883138999999999999999999999989999999999999999 Q gi|254780531|r 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82 (452) Q Consensus 3 ~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l~ 82 (452) ||+||+++++++++|++.++.|.++|+||||||||++|+|||++++++++|++++.+++||.+|+.++.+||+++|++|+ T Consensus 2 rIntN~~a~~a~~~l~~~~~~l~~~~~rlSSG~rIn~asDD~ag~aia~~l~s~~~~~~~~~~N~~~a~s~l~tad~al~ 81 (287) T PRK12807 2 RINTNINSMRTQEYMRQNQDKMNVSMNRLSSGKRINSAADDAAGLAIATRMRARQSGLEKASQNTQDGMSLIRTAESAMN 81 (287) T ss_pred EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 55142999999999999999999999986001664785537999999999999999899999889989999999999999 Q ss_pred HHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 99999999999875303776---303567889999999999986300121100135666543223343322211123333 Q gi|254780531|r 83 KAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159 (452) Q Consensus 83 ~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 159 (452) +++++|+|||||+|+++|++ .||++|+.||++|+++|.+|+++++|||++||.|......++.... .+ T Consensus 82 ~i~~il~RmrELavqa~n~t~s~~dR~ai~~E~~~L~~~i~~Ia~nt~fnG~~l~~g~~~~~~~~~~~~---------~~ 152 (287) T PRK12807 82 SVSNILTRMRDIAVQSSNGTNTAENQSALQKEFAELQEQIDYIAKNTEFNDKNLLAGTGAVTIGSTSIS---------GA 152 (287) T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCC---------CC T ss_conf 999999999999998744799888899999999999999999998573898740278876545443567---------75 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 32222222221354333332211111111122333223454433222111122221122222222211111111111101 Q gi|254780531|r 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239 (452) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (452) .+.+. ... ...... .. T Consensus 153 ~~~~~------------------------~~~-------~~~~~~-----------~~---------------------- 168 (287) T PRK12807 153 EISIE------------------------TLD-------SSATNQ-----------QI---------------------- 168 (287) T ss_pred EEEEE------------------------ECC-------CCCCCC-----------EE---------------------- T ss_conf 26787------------------------412-------566663-----------37---------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 00112221012333344332222233222221000001223444432110012332111000000001111111122344 Q gi|254780531|r 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319 (452) Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (452) .... .... .... . T Consensus 169 ---------~~~~----------~~~~---~~~~-----~---------------------------------------- 181 (287) T PRK12807 169 ---------TIKL----------ANTT---AEKL-----G---------------------------------------- 181 (287) T ss_pred ---------EEEE----------CCCC---HHHH-----C---------------------------------------- T ss_conf ---------8874----------1331---3442-----3---------------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 44332232223332222210000012233444321000000578999999999999999999878999999999999999 Q gi|254780531|r 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399 (452) Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~~~ 399 (452) ...............+..+|..||.++++|...|+.+||++||||...+++... T Consensus 182 --------------------------~~~~~~~~~~~~~~~a~~~l~~id~ai~~v~~~ra~lGA~~nrle~~~~~l~~~ 235 (287) T PRK12807 182 --------------------------IDATTSNISISGAASALAAISALNTALNTVAGNRATLGATLNRLDRNVENLNNQ 235 (287) T ss_pred --------------------------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf --------------------------233234333454777999999999999999999999899999999999899999 Q ss_pred HHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 9999973062220258999999999999999999999999720688987525 Q gi|254780531|r 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 400 ~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) .+++++++|+|+|+|||+|+++|+++||++|||++||+|||+.||.||+||| T Consensus 236 ~~~l~~~~S~i~DaD~A~e~~~l~~~qil~Qaa~a~lsqAN~~~q~vL~Llq 287 (287) T PRK12807 236 ATNMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 287 (287) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 9999999887771049999999999999999999999998467899998509 No 13 >PRK12805 flagellin; Provisional Probab=100.00 E-value=0 Score=422.80 Aligned_cols=282 Identities=18% Similarity=0.255 Sum_probs=225.6 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 40457999999999999999999999998512236883138999999999999999999999989999999999999999 Q gi|254780531|r 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82 (452) Q Consensus 3 ~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l~ 82 (452) ||+||+.+++++++|++.+..|.|+|+||||||||++|+|||++++++++|++++.+++||.+|+.++++||+++|++|. T Consensus 2 rIntN~~a~~a~~~L~~~~~~l~~s~~rLSSG~rIn~asDDaag~aia~~l~s~~~~~~q~~~N~~da~s~lqtad~aL~ 81 (287) T PRK12805 2 KVNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAASKNSSMGIDLLQTADSALS 81 (287) T ss_pred EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 55454999999999999999999999986023551674316999999999999999899999889999999999999999 Q ss_pred HHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 99999999999875303776---303567889999999999986300121100135666543223343322211123333 Q gi|254780531|r 83 KAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159 (452) Q Consensus 83 ~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 159 (452) ++.++|+|||||+||++|++ .||.+|+.||++|+++|.+|++++.|||++||+++.....+.... T Consensus 82 ~i~~iL~RmreLavqaangt~s~~dr~~i~~Ei~~L~~~i~~ia~~t~fng~~ll~~~~~~~~~~~~~------------ 149 (287) T PRK12805 82 SMSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKELDHVADTTNYNNIKLLDQTATGAATQVSI------------ 149 (287) T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEEE------------ T ss_conf 98999999999999755788887889999999999999999998735678852557777777424787------------ Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 32222222221354333332211111111122333223454433222111122221122222222211111111111101 Q gi|254780531|r 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239 (452) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (452) .. + .............. . T Consensus 150 --------------------~~------~-----------~~~~~~~~~~~~~~--------------~----------- 167 (287) T PRK12805 150 --------------------QA------S-----------DKANDLINIDLFNA--------------K----------- 167 (287) T ss_pred --------------------EE------C-----------CCCCCEEEEECCCC--------------C----------- T ss_conf --------------------51------4-----------77662367640222--------------3----------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 00112221012333344332222233222221000001223444432110012332111000000001111111122344 Q gi|254780531|r 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319 (452) Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (452) +.. .... .. +.... T Consensus 168 --~~~--~~~~-----------~~-------------------~~~~~-------------------------------- 181 (287) T PRK12805 168 --GLS--AGTI-----------TL-------------------GSGST-------------------------------- 181 (287) T ss_pred --CCC--CCCC-----------CC-------------------CCCCC-------------------------------- T ss_conf --444--2220-----------02-------------------55420-------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 44332232223332222210000012233444321000000578999999999999999999878999999999999999 Q gi|254780531|r 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399 (452) Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~~~ 399 (452) .................++..||.++++|...|+++||++||||+..+++... T Consensus 182 ---------------------------~~~~~~~~~~~~~~a~~a~~~id~ai~~v~~~ra~lGA~~NrLe~~~~~l~~~ 234 (287) T PRK12805 182 ---------------------------VAGYSALSVADADSSQEATEAIDELINNISNGRALLGAGMSRLSYNVSNVNNQ 234 (287) T ss_pred ---------------------------CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf ---------------------------00100000124778999999999999999999999999999999999999999 Q ss_pred HHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 9999973062220258999999999999999999999999720688987525 Q gi|254780531|r 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 400 ~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) .+++++++|+|+|+|||+|+++|+|+||++|++++||+|||+.||.||+||+ T Consensus 235 ~~nl~~~~S~i~DaD~A~e~~~l~k~qil~Qaa~amlaQAN~~pq~vL~Ll~ 286 (287) T PRK12805 235 SIATKASASSIEDADMAAEMSEMTKYKILTQTSISMLSQANQTPQMLTQLIN 286 (287) T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHC T ss_conf 9999998753772219999999999999999999999998327799998757 No 14 >PRK06663 flagellar hook-associated protein FlgL; Validated Probab=100.00 E-value=0 Score=419.20 Aligned_cols=413 Identities=13% Similarity=0.138 Sum_probs=234.1 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 97404579999999999999999999999985122368831389999999999999999999999899999999999999 Q gi|254780531|r 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80 (452) Q Consensus 1 m~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~ 80 (452) +.||+||+++.+++++|++.+++|.|+|+||||||||++|||||++++++++|+.++..++||.||++++.+||+++|++ T Consensus 2 ~~RIst~~~~~~~~~~l~~~~~~l~~~qeqlSSGkrI~~~SDDP~~~a~~~~l~~~~~~~~Qy~~N~~~a~s~l~~~e~~ 81 (420) T PRK06663 2 INRISHPMQYNNLKFSLREQESKITKLLNQLQTGKRIRKLRDDPTGATHSIRLDSRLFKLNTYEKNIDTGRSRLQYAEGY 81 (420) T ss_pred CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 71406399999999999999999999999874248658933599999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 9999999999999875303776---3035678899999999999863001211001356665432233433222111233 Q gi|254780531|r 81 MSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157 (452) Q Consensus 81 l~~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~~ 157 (452) |+++.++|+|||||+|||+|++ .||++|+.|+++|+++|.+|+|+++++|+|||+|......++............. T Consensus 82 L~~~~~il~r~relavqaaNgt~s~~dR~aia~Ei~~l~~~l~~iaNt~~~~G~~lF~G~~~~~~pf~~~~~~~~~~~~~ 161 (420) T PRK06663 82 LQSLGNILQRARELAVQGANGTYQGDDKKAIAKEIDELLEDLVAIANAKGADGYSLFSGTKIDREPFEPIESKIKGLQGD 161 (420) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC T ss_conf 99999999999999997426899867799999999999999999984055588464477137888764234443343332 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 33322222222213543333322111111111223332234544332221111222211222222222111111111111 Q gi|254780531|r 158 NGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237 (452) Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (452) ..........+.................+.........+.......... . ...+............... T Consensus 162 ~~~~~~~~i~y~G~~~~~~~~i~~~~~~~~~~~g~~~f~~~~~~~~~~~-----~------~~~~~~~~~~~~~~~~~~~ 230 (420) T PRK06663 162 ELKNQIIGVEYNGNQGEQLTEIENGEYIPTNYPGNKVFWGQNQSITSSV-----D------NSGFVVKEDTKIYIDGVEI 230 (420) T ss_pred CCCCCEEEEEECCCCCCCEEEECCCCEEEECCCCCCEEECCCCCCEECC-----C------CCCCEECCCCEEEECCEEE T ss_conf 3355325678525543000440366156302575210222553300012-----5------6540331463366314267 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 01001122210123333443322222332222210000012234444321100123321110000000011111111223 Q gi|254780531|r 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317 (452) Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (452) ....+..........+............... ..........................+ T Consensus 231 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 288 (420) T PRK06663 231 HLTAGDTADDIIAKINESSAPVKASLDPVLN-------SISISTTTPHQIWITDEEGSTVLRDLG--------------- 288 (420) T ss_pred EECCCCCHHHHHHHHCCCCCCEEEEEECCCC-------CEEEECCCCCCEEEECCCCCCCEECCC--------------- T ss_conf 5115751888887514777522576302455-------413311565413552056641000123--------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 44443322322233322222100000122334443210000005789999999999999999998789999999999999 Q gi|254780531|r 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397 (452) Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~ 397 (452) .........+....................................+|..||.++++|...||+||||+||||++.++++ T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~ld~a~~~v~~~ra~iGar~nrle~~~~~~~ 368 (420) T PRK06663 289 LLTQNTKEPPYNLSNSAEVRGRSIFDVLIQLRDALIQNDQELIGGRDLAELDEALENILRRLADLGAKENRLERSYERIS 368 (420) T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 22345567764434333335523888899887655324156566658999999999999999998799999999999888 Q ss_pred HHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 999999973062220258999999999999999999999999720688987525 Q gi|254780531|r 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 398 ~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) +..+++++++|+|+|+||||++++|+++|+.+||++++++|+.+ ||||. T Consensus 369 ~~~~~l~~~~S~i~DaD~a~~it~l~~~~~~~qAa~~~~a~i~~-----~SLfd 417 (420) T PRK06663 369 KEIMDMTEDMSKYTDLDVTKAITNLKMLELAHQVSLGVSAKIMK-----TTLLD 417 (420) T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCHHH T ss_conf 89999999886330523999999999999999999999998706-----62887 No 15 >PRK08870 flgL flagellar hook-associated protein FlgL; Reviewed Probab=100.00 E-value=0 Score=414.81 Aligned_cols=396 Identities=16% Similarity=0.138 Sum_probs=235.5 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 40457999999999999999999999998512236883138999999999999999999999989999999999999999 Q gi|254780531|r 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82 (452) Q Consensus 3 ~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l~ 82 (452) ||+||+++.+++++|++.+++|.++||||||||||++|||||++++++++|++++.+++||++|++++++||+++|++|+ T Consensus 2 RIst~~~~~~~~~~l~~~~~~l~~~~eqlSTGkrI~~~sDDp~~~~~~~~l~~~~~~l~q~~~N~~~~~s~l~~ad~aL~ 81 (403) T PRK08870 2 RISTAQMYQQSVNSMLDQQAKLSQLQQQLSSGKKLLTPSDDPVAAAQAVNLSQESALLDQYTKNINLARNRLQQEESTLG 81 (403) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 56569999999999999999999999997406864882138999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHCCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 999999999998753037763---03567889999999999986300121100135666543223343322211123333 Q gi|254780531|r 83 KAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159 (452) Q Consensus 83 ~~~~~l~r~relavqa~n~~~---dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 159 (452) ++.++|+|+|||+||++|++. ||++|+.|+++|+++|.+++|.+.|+|+|||+|......|+.........+....+ T Consensus 82 ~~~~il~r~relavqaangt~~~~dr~ai~~E~~~l~~~i~~iaNt~~~~G~~lF~G~~~~t~pf~~~~~g~~~y~Gd~~ 161 (403) T PRK08870 82 SVEDLLQRARELVVQAGNGSLSDSDRQAIATELQGLRDQLLSLANSKDESGNYLFAGTQSGTQPFAFDASGNVVYSGDSG 161 (403) T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEECCCCCEEEECCCC T ss_conf 99999999999999862467870569999999999999999998405546612204666666404434887458605765 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCC Q ss_conf 322222222213543333322111111111223332234544332221111222211222222-2221111111111110 Q gi|254780531|r 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF-KLATTSGAWLKAANAT 238 (452) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 238 (452) .......... ....+.................................. ................ T Consensus 162 ~~~~~v~~~~--------------~v~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (403) T PRK08870 162 QRQVQVADSV--------------TVATNDPGDEVFMSVPNGFGDYVPAAYAANTGSGLLVSVAKTTPSAPTNGDTYTIT 227 (403) T ss_pred CEEEEECCCC--------------EEEECCCHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCEEEE T ss_conf 2468741550--------------46504745777641346765201022234455532431010045555667634899 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 10011222101233334433222223322222100000122344443211001233211100000000111111112234 Q gi|254780531|r 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318 (452) Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (452) .....+.....+......... .......+..+.. ......... ... T Consensus 228 ~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~~~~~~~~----~~~~~~~~g---~~~ 273 (403) T PRK08870 228 FGDTAGAPTYEVTDSSTGTVV---------------------------TAQAYDAGQPINF----NGVEVQISG---APA 273 (403) T ss_pred EECCCCCCEEEEECCCCCCCC---------------------------CCCCCCCCCCEEE----CCEEEEEEC---CCC T ss_conf 831577513898505665312---------------------------3444456761230----554899703---546 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 44433223222333222221000001223344432100000057899999999999999999987899999999999999 Q gi|254780531|r 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398 (452) Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~~ 398 (452) ........+................+................+..+|..||+++++|...|++|||++||||++.++++. T Consensus 274 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~id~a~~~v~~~ra~lGa~~nrle~~~~~l~~ 353 (403) T PRK08870 274 AGDSFTLTPAAGVSIFDTLDDAIAALESPVDNSVSDAALQNELAQALTNLDNALNNVLTARASVGARLNELESYEAVHED 353 (403) T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 66427851476531998999999986366776431055688999999999999999999999985999999999988888 Q ss_pred HHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 99999973062220258999999999999999999999999720688987525 Q gi|254780531|r 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 399 ~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) ..+++++++|+|||+|||||+++|+++|+.+||+++|++|+++ ||||- T Consensus 354 ~~~~l~~~~S~i~DaD~ae~~t~l~~~q~~~qAa~~~~aqi~q-----~SL~d 401 (403) T PRK08870 354 NKLVNTSALSSLEDLDYASAISEFEKQQAALQAAQQAFSKVQS-----LSLFN 401 (403) T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCHHH T ss_conf 9999999876512547999999999999999999999998834-----51762 No 16 >PRK12687 flagellin; Reviewed Probab=100.00 E-value=0 Score=416.13 Aligned_cols=307 Identities=44% Similarity=0.664 Sum_probs=230.8 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 97404579999999999999999999999985122368831389999999999999999999999899999999999999 Q gi|254780531|r 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80 (452) Q Consensus 1 m~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~ 80 (452) |+||+||++|++|+++|++.+..|.++|+||||||||++|+|||++++++.+||+++.++++..+|+.++++.++++|++ T Consensus 1 M~sI~TN~~A~~A~~~L~~~~~~l~~s~~RLSTG~RInsA~DDAAglaIa~~mrs~~~gl~~a~~n~~~g~s~v~ta~~a 80 (311) T PRK12687 1 MSSLLTNTSAMTALQTLRNVSSSLATTQNRISTGYRVATASDNSAYWSIATTMRSDNEALSAVSDALGLGAATVDTMYTA 80 (311) T ss_pred CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 97320339999999999998999999999853236335531218899999999988988999998887478999999999 Q ss_pred HHHH----HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 9999----999999999875303776303567889999999999986300121100135666543223343322211123 Q gi|254780531|r 81 MSKA----IDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRD 156 (452) Q Consensus 81 l~~~----~~~l~r~relavqa~n~~~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~ 156 (452) |.++ .++|.+||++++++.+++.||..|+.|+.+|.+||.+|+.++.|||.+||.++.....+.........+... T Consensus 81 l~~v~~~~~~~l~~l~~~~~~a~~~~~Dr~~iq~E~~~L~~ei~~ia~~t~fNG~nlL~~~~~~~~~~~~~~~~~~~~~~ 160 (311) T PRK12687 81 LTSVVGDSKSGLTALKAKLVAAREPGIDRTKIQSEITAIQNDLKNTAGLAVFNGENWLSVDSSPSSYNATKSVVSSFTRV 160 (311) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCEECC T ss_conf 99889889999999999998545674138999999999999999999756534424304676444454421000000024 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 33332222222221354333332211111111122333223454433222111122221122222222211111111111 Q gi|254780531|r 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236 (452) Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (452) . +........ ............. T Consensus 161 ~-g~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~------- 183 (311) T PRK12687 161 G-GTVAIKTID-------------------------------------------------VNIAKLALYDTNG------- 183 (311) T ss_pred C-CCCEEEEEE-------------------------------------------------EECHHHHHCCCCC------- T ss_conf 7-731000145-------------------------------------------------3110121003566------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 10100112221012333344332222233222221000001223444432110012332111000000001111111122 Q gi|254780531|r 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316 (452) Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (452) ... . +...... ....... T Consensus 184 ---~~~-----~--------~~~~~~~-----------------~~~~~~~----------------------------- 201 (311) T PRK12687 184 ---SST-----T--------GILDKTV-----------------TVGTATA----------------------------- 201 (311) T ss_pred ---CCC-----C--------CCHHHHH-----------------CCCCCCC----------------------------- T ss_conf ---431-----1--------1000000-----------------0343322----------------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 34444332232223332222210000012233444321000000578999999999999999999878999999999999 Q gi|254780531|r 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396 (452) Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~~ 396 (452) . .. ................+..+|..||.++..|...|+.+||.+||||++++++ T Consensus 202 ----~-------------------~~--~~~~~~~~~~~~~~~~~~~~i~~id~Ai~~v~~~ra~lGA~~nRLe~~~~nl 256 (311) T PRK12687 202 ----S-------------------VS--SIDIHLLTDSATDLTKLDGYIGIVDQALGSVTQASADLGATKTRIDSNSNFV 256 (311) T ss_pred ----C-------------------CC--CCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf ----1-------------------00--1210110111445788987999999999999999998707899999999899 Q ss_pred HHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 9999999973062220258999999999999999999999999720688987525 Q gi|254780531|r 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 397 ~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) ....+++++++|||+|+|||+|+++|+|+|||||++++||+||||.||+||+||| T Consensus 257 ~~~~~nl~aa~grI~DADmA~Esa~l~k~QilqQag~amLaqANq~pQ~vLsLlr 311 (311) T PRK12687 257 KSLRDAIDRGVGQLVDADMNAESTRLQALQTQQQLGIQALSIANQGSQSILSLFK 311 (311) T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCC T ss_conf 9999999986768756659999999999999999999999998457599998619 No 17 >PRK12802 flagellin; Provisional Probab=100.00 E-value=0 Score=415.86 Aligned_cols=277 Identities=21% Similarity=0.314 Sum_probs=226.8 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 74045799999999999999999999999851223688313899999999999999999999998999999999999999 Q gi|254780531|r 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81 (452) Q Consensus 2 ~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l 81 (452) .||+||+++++++++|++.+..|.++|+||||||||++|+|||++++++++|++++.+++||.+|+.++.+||+++|++| T Consensus 3 m~I~tN~~a~~a~~~L~~~~~~l~~s~~rlSSGkri~~~sDDpa~~a~a~~l~s~~~~~~q~~~N~~~a~s~l~~ad~aL 82 (282) T PRK12802 3 LTVNTNITSLTVQKNLSRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRQTSQIRGQTQAIKNANDGISIAQTAEGAL 82 (282) T ss_pred EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 17837699999999999999999999998722055167644499999999999999989999988999998999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 999999999999875303776---30356788999999999998630012110013566654322334332221112333 Q gi|254780531|r 82 SKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN 158 (452) Q Consensus 82 ~~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 158 (452) .++.++|+|||||+||++|++ .||++|+.|+++|+++|.+|+++++|||+|||.|..+...+..+... T Consensus 83 ~~i~~~l~R~reLavqaan~t~s~~dr~ai~~Ei~~L~~qi~~ian~t~fnG~~lf~g~~~~~~~~vg~~~--------- 153 (282) T PRK12802 83 QESTNILQRMRELAVQSRNDSNDSTDRAALNKEFTTMLDEITRIATSTTLNGKNLLDGSAGTMTFQVGANT--------- 153 (282) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCC--------- T ss_conf 99999999999999976237899999999999999999999999874627885300588875578764788--------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 33222222222135433333221111111112233322345443322211112222112222222221111111111110 Q gi|254780531|r 159 GKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238 (452) Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (452) +... .+... ... . T Consensus 154 --------------------------------------------~~~~---------~~~~~---~~~-----------~ 166 (282) T PRK12802 154 --------------------------------------------GQSN---------QITFG---LSA-----------S 166 (282) T ss_pred --------------------------------------------CCEE---------EEEEE---ECC-----------C T ss_conf --------------------------------------------8604---------78752---012-----------2 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 10011222101233334433222223322222100000122344443211001233211100000000111111112234 Q gi|254780531|r 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318 (452) Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (452) +... .... . T Consensus 167 ~~~~-------------------~~~~--------------------~-------------------------------- 175 (282) T PRK12802 167 FDAT-------------------GLGV--------------------G-------------------------------- 175 (282) T ss_pred CCCC-------------------CCCC--------------------C-------------------------------- T ss_conf 3543-------------------4243--------------------2-------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 44433223222333222221000001223344432100000057899999999999999999987899999999999999 Q gi|254780531|r 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398 (452) Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~~ 398 (452) ................+..++..||.++++|...|+++|+++||||...+++.. T Consensus 176 --------------------------~~~~~~~~~~~~~~~~~~~~l~~id~ai~~v~~~ra~~Ga~~nrle~~~~~l~~ 229 (282) T PRK12802 176 --------------------------SGTLITGADSAAAETNAQAAITAIDAALQTINTTRADLGAAQNRLQSTISNLQN 229 (282) T ss_pred --------------------------HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf --------------------------023312442211054699999999999999999999874998899999988999 Q ss_pred HHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 99999973062220258999999999999999999999999720688987525 Q gi|254780531|r 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 399 ~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) ..+++++.+|+|+|+|||+|+++|+++||++|||++||+||||.||.||+||| T Consensus 230 ~~~nl~~~~s~i~DaD~A~e~~~l~~~qi~~Qaa~a~laqANq~~q~vl~Llq 282 (282) T PRK12802 230 INENASAARGRVQDTDFAAETAQLTKQQTLQQASTSVLAQANQLPSAVLKLLQ 282 (282) T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 99999998766660059999999999999999999999999676899998509 No 18 >PRK12804 flagellin; Provisional Probab=100.00 E-value=0 Score=411.13 Aligned_cols=296 Identities=19% Similarity=0.299 Sum_probs=222.7 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 40457999999999999999999999998512236883138999999999999999999999989999999999999999 Q gi|254780531|r 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82 (452) Q Consensus 3 ~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l~ 82 (452) ||+||+.++++|++|++.+++|.++|+||||||||++|+|||++++++++|++++.+++||.+|+.++.+||+++|++|. T Consensus 2 rIt~n~~a~~al~~L~~~~~~l~~~q~rLSSGkrI~~asDDpa~~aia~~l~s~~~~~~~~~~N~~~a~s~l~tad~al~ 81 (307) T PRK12804 2 RINHNIAALNTLNRLSANNGASQKNMEKLSSGLKINRAGDDAAGLAISEKMRGQIRGLEMASKNAQDGISLIQTAEGALT 81 (307) T ss_pred EEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 56242999999999999999999999985411763774217999999999999999999999989999999999999999 Q ss_pred HHHHHHHHHHHHHHHHCCC-C---CCHHHHHHHHHHHHHHHHHHHH------HHHHHHHHCCCCCCCCCCCCCCCCCCCC Q ss_conf 9999999999987530377-6---3035678899999999999863------0012110013566654322334332221 Q gi|254780531|r 83 KAIDVMSTIKNKITAGVER-G---TDSKSIQSEITQLQSQLRDIAR------GSSFNGENWLRTDLGSSTASIAKSVIGS 152 (452) Q Consensus 83 ~~~~~l~r~relavqa~n~-~---~dr~a~~~e~~~l~~~i~~ian------~t~~nG~~l~~g~~~~~~~~~~~~~~~~ 152 (452) ++.++|+|||||+||++|+ + .||++|+.||++|+++|..++| ++.|+|+++|.|......+....... . T Consensus 82 ~~~~il~R~rELavqaaN~Gt~s~~dr~ai~~Ei~~L~~qi~~~~n~~~i~~~t~f~G~~~~~g~~~~~~~~~~~~~~-~ 160 (307) T PRK12804 82 ETHSILQRVRELVVQAGNTGTQDGTDLGAIQEEIKALVDEIGNGTDKNGISDRTEFNGKKLLDGTFKPAAPAAGTKSL-T 160 (307) T ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCE-E T ss_conf 999999999999998536777888899999999999999997430334023104207876125665456767777616-9 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 11233333222222222135433333221111111112233322345443322211112222112222222221111111 Q gi|254780531|r 153 FIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232 (452) Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (452) +.. +. .. .... .+........ T Consensus 161 ~~~--------------------------------g~---------~~--~~~~---------~v~~~~~~~~------- 181 (307) T PRK12804 161 FQI--------------------------------GA---------NA--AQQL---------SVNIEAMSAD------- 181 (307) T ss_pred EEE--------------------------------CC---------CC--CCEE---------EEEEEECCCH------- T ss_conf 985--------------------------------47---------77--6437---------8875423302------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 11111010011222101233334433222223322222100000122344443211001233211100000000111111 Q gi|254780531|r 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312 (452) Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (452) ..+......... .. T Consensus 182 -----------------------------~~~~~~~~~~~~----~~--------------------------------- 195 (307) T PRK12804 182 -----------------------------ALGVKDADGTLV----TG--------------------------------- 195 (307) T ss_pred -----------------------------HHCCCCCCCCCC----CC--------------------------------- T ss_conf -----------------------------313555554212----34--------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 11223444433223222333222221000001223344432100000057899999999999999999987899999999 Q gi|254780531|r 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392 (452) Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~ 392 (452) . ........ ...........++...|..||.++++|...|+++||++||||+. T Consensus 196 -------~-------------------~~~~~~~~-~~~~~~~~~~~~~~~~l~~id~al~~v~~~ra~lGA~~nrle~~ 248 (307) T PRK12804 196 -------K-------------------SVSDIDVT-KFADIAADADGGFDDQLDIVDGAIKQVSDQRSKLGAVQNRLEHT 248 (307) T ss_pred -------C-------------------CCCHHHHH-HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf -------2-------------------10000223-32000110010078899999999999999998868999999999 Q ss_pred HHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 99999999999973062220258999999999999999999999999720688987525 Q gi|254780531|r 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 393 ~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) .++++...+++++++|+|+|+|||+|+++|+++|+++||+++||+|||+.||.||+||| T Consensus 249 ~~~l~~~~~nl~~~~s~i~DaD~A~e~~~l~~~qi~~Qaa~a~laqAN~~~q~~L~Ll~ 307 (307) T PRK12804 249 INNLGASSENLTAAESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQQPQNVLQLLR 307 (307) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 98899999999998743560069999999999999999999999998266899998519 No 19 >COG1344 FlgL Flagellin and related hook-associated proteins [Cell motility and secretion] Probab=100.00 E-value=0 Score=394.39 Aligned_cols=352 Identities=26% Similarity=0.291 Sum_probs=234.5 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 74045799999999999999999999999851223688313899999999999999999999998999999999999999 Q gi|254780531|r 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81 (452) Q Consensus 2 ~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l 81 (452) .||+||+.|+.++++|++.+.+|.|+++||||||||++|+|||++++++.+|++++.+++||.+|+.++.+||+++|++| T Consensus 1 mrI~tn~~a~~~~~~l~~~~~~l~k~~~rlSSG~rI~~a~Ddaa~~~is~~l~~~~~~L~q~~~n~~~g~s~lqtae~aL 80 (360) T COG1344 1 MRINTNMAALNALRNLNKNQSELAKSQERLSSGLRINSASDDAAGLAIALRLRSQIRGLSQAKDNAQDGISKLQTAEGAL 80 (360) T ss_pred CEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 96032999999999999999999999998523531478240589999999999999988999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-----CCCCC Q ss_conf 999999999999875303776---3035678899999999999863001211001356665432233433-----22211 Q gi|254780531|r 82 SKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS-----VIGSF 153 (452) Q Consensus 82 ~~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~-----~~~~~ 153 (452) +++.++|+|||||+||++|++ .||.+|+.|+++|+++|.+|+|.++|||+|||.|.... .++.... ....+ T Consensus 81 ~~~~~~lqrirelavqaan~t~s~~dr~~iq~Ei~~l~~el~~iAntt~fnG~~lf~G~~t~-~p~~~~~~~~~~~~~~~ 159 (360) T COG1344 81 SEISKILQRIKELAVQAANGTLSDADRAAIQKEIEQLLDELDNIANTTSFNGEYLFAGSKTD-KPFDFQNAGGETIKGSF 159 (360) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC-CCCEECCCCCCEEEECC T ss_conf 99999999999999986369999899999999999999999999852665885654776788-87200268762356303 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 12333332222222221354333332211111111122333223454433222111122221122222222211111111 Q gi|254780531|r 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233 (452) Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (452) .....+............ .................. ... T Consensus 160 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~--------------~~~---------------- 198 (360) T COG1344 160 NSDSSGTVSVGLDITNTG-----------DLSFTSLGTTAKDEPIDA--------------GDV---------------- 198 (360) T ss_pred CCCCCCCCCCCCCCCCCC-----------CHHCCCCCCCCCCCCCCC--------------CCC---------------- T ss_conf 345544340014466543-----------011013565322245554--------------322---------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 11110100112221012333344332222233222221000001223444432110012332111000000001111111 Q gi|254780531|r 234 AANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313 (452) Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (452) ............. .......+ ....... .. ...... T Consensus 199 ----~~~~~~~~~~~~~---------~~~~~~~~-------------~~~~~~~--~~-------~~~~~~--------- 234 (360) T COG1344 199 ----TAGPTNLFGAGAN---------AADGASLG-------------KALDAAT--TN-------TQIGAN--------- 234 (360) T ss_pred ----CCCCCCCCCCCCC---------CCCCCCCC-------------CCCCCCC--HH-------HHCCCC--------- T ss_conf ----1356543323332---------21101135-------------3111110--11-------000222--------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 12234444332232223332222210000012233444321000000578999999999999999999878999999999 Q gi|254780531|r 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393 (452) Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~ 393 (452) ............. ....... ..... ..........+..++..||.++++|...|+++|+++|||++.. T Consensus 235 -----~~~~~~~~~~~~~----~~~~~~~--~~~~~-~~~~~~~~~~~~~~l~~id~Al~~i~~~ra~lGa~qnrl~~~~ 302 (360) T COG1344 235 -----VGQTTTLNINDGN----VMTASAA--GALAD-PGSSVATADGAQAALGTIDSALDNITSARAELGAVQNRLESAI 302 (360) T ss_pred -----CCCCEEECCCCCC----HHHHHHH--HHHCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf -----3443000245320----1456543--34403-5543110446887999999999999999998738999999999 Q ss_pred HHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 9999999999973062220258999999999999999999999999720688987525 Q gi|254780531|r 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 394 ~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) +++..+.+++++.+|+|+|+|||||+++|.++|+++||+++||+|||+.|+.+|+||| T Consensus 303 ~~l~~~~~nl~~~~s~i~D~D~aee~t~l~~~q~~~Qas~~~laqan~~s~~~l~ll~ 360 (360) T COG1344 303 NNLSNQSDNLTAAESRIVDVDMAEESTELTKLQILQQASLQALAQANQLSLLVLSLLR 360 (360) T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 8898899999998864007769999999999999999999999999860288897359 No 20 >PRK12718 flgL flagellar hook-associated protein FlgL; Provisional Probab=100.00 E-value=0 Score=383.27 Aligned_cols=147 Identities=12% Similarity=0.126 Sum_probs=141.1 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 40457999999999999999999999998512236883138999999999999999999999989999999999999999 Q gi|254780531|r 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82 (452) Q Consensus 3 ~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l~ 82 (452) ||+|++++...+++|.+.+++|.++|+||||||||++|||||++++++++|+..+..++||.+|++.+.+||..+|++|. T Consensus 2 RISt~~~~~~~~~~~~~~q~~l~~~q~qlssGkri~~psDDPvaa~~~~~l~~~~~~~~qy~~N~~~a~~~L~~~e~~L~ 81 (510) T PRK12718 2 RLSTALIYQNGLNGVLNQEAAMARLQEQLSSGRRVLTPADDPLAAALAVNVSQTSSMNSNYDANRKQAEQALGAQTNTLQ 81 (510) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 35369999999999999999999999998507866882109999999999999999999999999999999998999999 Q ss_pred HHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC Q ss_conf 99999999999875303776---30356788999999999998630012110013566654322334332 Q gi|254780531|r 83 KAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSV 149 (452) Q Consensus 83 ~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~ 149 (452) ++.++|+|+|||+|+|.|++ .||++|+.|+++|+++|+.++|+++++|+|||.|+.....|+..... T Consensus 82 ~v~~~l~~~~el~v~a~ngt~s~~dr~aia~El~~~~~~l~~laNs~d~~G~ylFaG~~~~t~Pf~~~~~ 151 (510) T PRK12718 82 SVVKNMQEMLKRVVEAGNGTMSDADRQALVIALKGAREELVGLANATDGNGQYLFSGYKGFTQPYSFDAA 151 (510) T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEECCC T ss_conf 9999999999999985178889788999999999999999999646587887744673578998313489 No 21 >PRK07192 flgL flagellar hook-associated protein FlgL; Reviewed Probab=100.00 E-value=0 Score=365.58 Aligned_cols=299 Identities=16% Similarity=0.198 Sum_probs=226.5 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 40457999999999999999999999998512236883138999999999999999999999989999999999999999 Q gi|254780531|r 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82 (452) Q Consensus 3 ~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l~ 82 (452) ||+||+++.+.+++|++.+.+|.++|+||||||||++|||||++++++++|+.++..++||.+|+.++.+||+++|++|+ T Consensus 2 RIst~~~~~~~l~~l~~~~~~l~~~q~qlsSGkri~~~sDDp~~~~~~~~l~~~~~~~~q~~~N~~~a~~~l~~~d~aL~ 81 (305) T PRK07192 2 RISTNQLYSTMLRSIQQSQAGLMKLQQQMSTGKRILTPSDDPIASVRLLELNREQANIKQYRSNIANLSNSLSAQEGHLS 81 (305) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 56569999999999999999999999998337853894238999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 99999999999875303776---303567889999999999986300121100135666543223343322211123333 Q gi|254780531|r 83 KAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159 (452) Q Consensus 83 ~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 159 (452) ++.++|+|||||+||++|++ .||++++.|+++|+++|..++|.++|+|+|||+|......|+............+. T Consensus 82 ~~~~il~r~rel~vqa~ngt~s~~dr~aia~Ei~~l~~~l~~~aNt~~~~G~ylF~G~~~~~~pf~~~~~~~~~~y~G~- 160 (305) T PRK07192 82 GVNDQLQSVRDLLVAAGNGSLSDEDRSAMATELRSMLDSLLGLANAKDSEGRYLFSGTASNTQPITFDPAGGKYTYNGN- 160 (305) T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEECCCCCEEEEECC- T ss_conf 9999999999999985068898267998888999989999999874142651353254356664133378870688448- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 32222222221354333332211111111122333223454433222111122221122222222211111111111101 Q gi|254780531|r 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239 (452) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (452) ........... ........ T Consensus 161 -------------------------------~~~~~~~i~~~-----------~~~~~~~~------------------- 179 (305) T PRK07192 161 -------------------------------SDQRQVQVGEG-----------VQLPVNVT------------------- 179 (305) T ss_pred -------------------------------CCCEEEEECCC-----------EEEEECCC------------------- T ss_conf -------------------------------76447884167-----------04430453------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 00112221012333344332222233222221000001223444432110012332111000000001111111122344 Q gi|254780531|r 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319 (452) Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (452) + .. . .. . +.... + .. . T Consensus 180 --g-~~--~-------------f~----~--------------~~~~~-f--------~~-----------l-------- 195 (305) T PRK07192 180 --L-QS--V-------------FE----G--------------GGLDV-L--------NA-----------L-------- 195 (305) T ss_pred --H-HH--H-------------HC----C--------------CCHHH-H--------HH-----------H-------- T ss_conf --8-88--7-------------52----5--------------73568-9--------99-----------9-------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 44332232223332222210000012233444321000000578999999999999999999878999999999999999 Q gi|254780531|r 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399 (452) Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~~~ 399 (452) ......+ ...............+..++..||.++++|...|+++|+++||||...+.+++. T Consensus 196 ------------------~~~~~~l-~~~~~~~~~~~~~~~~~~~l~~ld~a~~~v~~~~a~iGa~~nrle~~~~~~~~~ 256 (305) T PRK07192 196 ------------------DKLIDDL-KTPTLPAGDPALTAAIDEALGAIDNALDNVLGTLTEVGSRQKELDLLQKNHEDM 256 (305) T ss_pred ------------------HHHHHHH-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf ------------------9999874-166655543336999999999999999999999999859999999999889999 Q ss_pred HHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 9999973062220258999999999999999999999999720688987525 Q gi|254780531|r 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 400 ~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) .+++++.+|+|+|+||||++++|++.|+.+||+++++++.++ ||||. T Consensus 257 ~~~l~~~~s~i~d~D~a~a~t~l~~~q~~~qAs~~~~a~i~~-----lSL~d 303 (305) T PRK07192 257 KLQNAKILSDLQDLDYAEAYTDLSNQMAALEATQKTFVKVNS-----LSLFN 303 (305) T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCHHH T ss_conf 999999987754557999999999999999999999998816-----73873 No 22 >PRK07701 flgL flagellar hook-associated protein FlgL; Validated Probab=100.00 E-value=0 Score=365.09 Aligned_cols=294 Identities=15% Similarity=0.146 Sum_probs=222.8 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 40457999999999999999999999998512236883138999999999999999999999989999999999999999 Q gi|254780531|r 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82 (452) Q Consensus 3 ~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l~ 82 (452) ||+||+.+.+++++|++.+++|.++|+||||||||++|||||++++++++|+.++..++||.+|+.++.+||+++|++|. T Consensus 2 RIst~~~~~~~~~~l~~~~~~l~~~~~qlsSGkri~~~sDDp~~~~~~~~l~~~~~~~~q~~~N~~~a~s~l~~~e~~L~ 81 (301) T PRK07701 2 RVTQGMIANNSLRNINKSLEKLDKYQEQLSTGKKITKPSDDPVVAMKSLRYRTDLAQVEQYQRNASDAKNWLENTESALN 81 (301) T ss_pred EECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 71649999999999999999999999987336852780108999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 99999999999875303776---303567889999999999986300121100135666543223343322211123333 Q gi|254780531|r 83 KAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159 (452) Q Consensus 83 ~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 159 (452) ++.++|+|||||+||++|++ .||++++.|+++|+++|..++| ++|+|+|||+|......|+........ T Consensus 82 ~~~~~l~r~rel~vqa~ngt~s~~dr~~ia~E~~~l~~~l~~~aN-t~~~G~ylF~G~~~~~~pf~~~~~~~~------- 153 (301) T PRK07701 82 EATDILQRARELAVQAANGTNTEEDRQAIAQEIEQLKDQLIQIAN-TQVNGRYIFNGTNTDTPPVTENGDGTY------- 153 (301) T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-CCCCCEEEECCCCCCCCCEECCCCCCE------- T ss_conf 999999999999998605999877799999999988999999970-551781320575567764011787614------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 32222222221354333332211111111122333223454433222111122221122222222211111111111101 Q gi|254780531|r 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239 (452) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (452) ... +. ............. ....... T Consensus 154 --~~~---~~-------------------~~~~~~~~~i~~g-----------~~~~~n~-------------------- 178 (301) T PRK07701 154 --TFE---NS-------------------TDSSDVKIEISKG-----------VKINVNV-------------------- 178 (301) T ss_pred --EEE---EC-------------------CCCCEEEEEECCC-----------CEEEECC-------------------- T ss_conf --566---31-------------------6763068884277-----------1577315-------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 00112221012333344332222233222221000001223444432110012332111000000001111111122344 Q gi|254780531|r 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319 (452) Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (452) .+ . ..... ... .. T Consensus 179 -~g--------------------~--------~~f~~----~~~-~~--------------------------------- 191 (301) T PRK07701 179 -DG--------------------N--------SAFGG----DSG-GG--------------------------------- 191 (301) T ss_pred -CH--------------------H--------HHHCC----CCC-CC--------------------------------- T ss_conf -54--------------------8--------76424----355-53--------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 44332232223332222210000012233444321000000578999999999999999999878999999999999999 Q gi|254780531|r 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399 (452) Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~~~ 399 (452) ...... ...............+..++..||.++++|...|+++|+++||||...++++.. T Consensus 192 ---------------~~i~~~-----l~~~~~~l~~~~~~~~~~~l~~id~a~~~v~~~ra~~Ga~~nrle~~~~~~~~~ 251 (301) T PRK07701 192 ---------------QNLFEM-----LDNLENALESGTHTGVSNALGDIDQFINNVLAERAELGARSNRLELIENRLSDQ 251 (301) T ss_pred ---------------HHHHHH-----HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf ---------------049998-----999998742677889999999999999999999998618999999999889999 Q ss_pred HHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 9999973062220258999999999999999999999999720688987525 Q gi|254780531|r 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 400 ~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) .+++++.+|+|+|+|||+|+++|++.|+.+||++++++|..+ ||||. T Consensus 252 ~~~l~~~~s~i~D~D~a~a~~~l~~~q~~~qAa~~~~a~i~q-----~SL~d 298 (301) T PRK07701 252 EINATKLLSDNEDVDLAEVITDLKTQENVYRAALAVGARIIQ-----PSLVD 298 (301) T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CHHHH T ss_conf 999999988775545999999999999999999999998835-----60988 No 23 >PRK08027 flgL flagellar hook-associated protein FlgL; Reviewed Probab=100.00 E-value=0 Score=341.38 Aligned_cols=309 Identities=13% Similarity=0.151 Sum_probs=226.0 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 40457999999999999999999999998512236883138999999999999999999999989999999999999999 Q gi|254780531|r 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82 (452) Q Consensus 3 ~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l~ 82 (452) ||.|++++.+.+.+|++.+.+|.++|+||||||||++|||||+++.++++|+..+..++||.+|+..+.+||..+|++|. T Consensus 2 RIst~~~~~~~~~~l~~~~~~l~~~q~qlssGk~i~~~SDDP~~~~~~~~l~~~~~~~~qy~~n~~~a~~~l~~~e~~L~ 81 (317) T PRK08027 2 RLSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLARTFATQKVSLEESVLS 81 (317) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 17669999999999999999999999998607866881019999999999999999999999999999999998999999 Q ss_pred HHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 99999999999875303776---303567889999999999986300121100135666543223343322211123333 Q gi|254780531|r 83 KAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159 (452) Q Consensus 83 ~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 159 (452) ++.++|+|+|||+|++.|++ .||++++.|+++|+++|..++|.++++|+|||+|......|+..... .+. .... T Consensus 82 ~~~~~l~~~rel~v~a~n~t~~~~~r~a~a~ei~~l~~~l~~~aN~~~~~G~ylF~G~~~~t~Pf~~~~~--~y~-G~~~ 158 (317) T PRK08027 82 QVTTAIQSAQEKIVYAGNGTLSDDDRASLATDLQGLRDQLLNLANTTDGNGRYIFAGYKTEKAPFDEATG--GYV-GGTE 158 (317) T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCC--CCC-CCCC T ss_conf 9999999999999975068998778999999999999999999726476886445887789998406898--723-7876 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 32222222221354333332211111111122333223454433222111122221122222222211111111111101 Q gi|254780531|r 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239 (452) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (452) .+... .........+. .+.... T Consensus 159 ~~~~~--------------v~~~~~~~~~~------------~G~~vf-------------------------------- 180 (317) T PRK08027 159 SITQQ--------------VDAARSMVIGH------------TGDQIF-------------------------------- 180 (317) T ss_pred CEEEE--------------CCCCCEEEECC------------CCHHHH-------------------------------- T ss_conf 64463--------------16763244057------------711555-------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 00112221012333344332222233222221000001223444432110012332111000000001111111122344 Q gi|254780531|r 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319 (452) Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (452) ..+....... ... . ...... T Consensus 181 --------~~~~~~~~~~---~~~-~----------------~~~~~i-------------------------------- 200 (317) T PRK08027 181 --------DSITSNAVPE---PDG-S----------------ASETNL-------------------------------- 200 (317) T ss_pred --------HCCCCCCCCC---CCC-C----------------CCCCCH-------------------------------- T ss_conf --------0266566568---888-8----------------652329-------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 443322322233322222100000122-3344432100000057899999999999999999987899999999999999 Q gi|254780531|r 320 TESTTLDSRKDLPKEIDSGYSMVTLNI-TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398 (452) Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~~ 398 (452) +.........+.. ..............+..++..|+.++++|...|+++|+|+||||...+.+++ T Consensus 201 --------------f~~ld~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~l~~a~~~v~~~~a~iG~r~n~le~~~~~~~~ 266 (317) T PRK08027 201 --------------FAMLDTAIAALKTPVAGSDADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESLDSLGSD 266 (317) T ss_pred --------------HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf --------------999999999872745688401568999999999999999999999999998999999999976677 Q ss_pred HHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 99999973062220258999999999999999999999999720688987525 Q gi|254780531|r 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 399 ~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) ..+++++.+|++||+||||++++|++.|+.+||+++++++..+ ||||. T Consensus 267 ~~l~~~~~~S~~eD~D~aeaisel~~~q~alqAa~~~faki~~-----lSLfd 314 (317) T PRK08027 267 RALGQKQQMSDLVDVDWNSAISSYVMQQAALQASYKTFTDMQG-----MSLFQ 314 (317) T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCHHH T ss_conf 9989999987613658999999999999999999999999834-----73987 No 24 >PRK08073 flgL flagellar hook-associated protein FlgL; Validated Probab=100.00 E-value=0 Score=340.08 Aligned_cols=281 Identities=11% Similarity=0.156 Sum_probs=221.9 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 40457999999999999999999999998512236883138999999999999999999999989999999999999999 Q gi|254780531|r 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82 (452) Q Consensus 3 ~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l~ 82 (452) ||.||+.+.+++++|++.+.+|.++|+||||||||++|||||++++++++|+.++..++||.+|+.++.+||+++|++|+ T Consensus 2 RItt~~~~~~~l~~l~~~~~~l~~~q~qissGkki~~~sDDP~~~~~~~~l~~~~~~~~qy~~N~~~a~~~l~~~e~aL~ 81 (287) T PRK08073 2 RVSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLSMSEDPLAASKSFAIQHSLANIEQMQKDVADSKNVLTQTENTLS 81 (287) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 06629999999999999999999999998538867980008999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHCCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 999999999998753037763---03567889999999999986300121100135666543223343322211123333 Q gi|254780531|r 83 KAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159 (452) Q Consensus 83 ~~~~~l~r~relavqa~n~~~---dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 159 (452) ++.++|+|+|||+||++|++. ||++++.|+++|+++|..++|. +++|+|||+|......|+.... .+.+ T Consensus 82 ~~~~~l~r~~el~vqa~ngt~s~~dr~aia~Ei~~l~~~l~~~aNt-~~~G~ylF~G~~~~~~pf~~d~---ty~G---- 153 (287) T PRK08073 82 GVSKSLTRVDQLVLQALNGTNDEKELKAIGAEIDQILKQVVYLANT-KEQGRYIFGGDSAEKKPFTEDG---TYQG---- 153 (287) T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCEECCCCCCCCCCCCCCC---CCCC---- T ss_conf 9999999999999987168999999999999999999999998527-5478310068656778601455---5437---- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 32222222221354333332211111111122333223454433222111122221122222222211111111111101 Q gi|254780531|r 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239 (452) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (452) ........... . ..+ T Consensus 154 ------------------------------~~~~~~~~i~~----~---------~~v---------------------- 168 (287) T PRK08073 154 ------------------------------GTNDVNWRLND----G---------YEV---------------------- 168 (287) T ss_pred ------------------------------CCCCEEEECCC----C---------EEE---------------------- T ss_conf ------------------------------77660354167----6---------257---------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 00112221012333344332222233222221000001223444432110012332111000000001111111122344 Q gi|254780531|r 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319 (452) Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (452) ... .. +...+ . + T Consensus 169 ---------~~~----------~~---------------------g~~~~--------~--------------------~ 180 (287) T PRK08073 169 ---------KAF----------RN---------------------GEALL--------T--------------------P 180 (287) T ss_pred ---------EEE----------CC---------------------CHHHH--------H--------------------H T ss_conf ---------730----------36---------------------21676--------7--------------------8 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 44332232223332222210000012233444321000000578999999999999999999878999999999999999 Q gi|254780531|r 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399 (452) Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~~~ 399 (452) .... ...............+..++..++.++++|...|+++|+++||||...+.+++. T Consensus 181 -----------------~~~~-----l~~l~~al~~~d~~~~~~~l~~~~~~~d~v~~~~a~vGar~nrle~~~~~~~~~ 238 (287) T PRK08073 181 -----------------VIKT-----LKKMSDAMQKGDQKALQPLLEENKKNLDGIINRTTEVGSTMNTVETFKTILSEQ 238 (287) T ss_pred -----------------HHHH-----HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf -----------------9999-----999999875777878999999999999999999999989999999999888889 Q ss_pred HHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 9999973062220258999999999999999999999999720688987525 Q gi|254780531|r 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 400 ~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) .+++++.+|+|||+||||++++|++.|+.+||+++++++..+ ||||- T Consensus 239 ~~~l~~~~S~ieD~D~Aeai~~l~~~~~~lqAal~~~aki~q-----~SL~d 285 (287) T PRK08073 239 NLALQENRKEIEDVDLAVAISDLAYINATYEATLKAVSTMSK-----TSILD 285 (287) T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCHHH T ss_conf 999999887755546999999999999999999999998705-----51762 No 25 >PRK08913 flgL flagellar hook-associated protein FlgL; Validated Probab=100.00 E-value=0 Score=303.20 Aligned_cols=298 Identities=17% Similarity=0.165 Sum_probs=223.9 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 97404579999999999999999999999985122368831389999999999999999999999899999999999999 Q gi|254780531|r 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80 (452) Q Consensus 1 m~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~ 80 (452) |.||+|++++.+.|.+|++.+.+|.++|+|||||||+++|||||+++.+++.|+..+..++||++|+..+.+||...|++ T Consensus 2 ~MRist~~~~~~~l~~i~~~q~~l~~~q~qlsTGk~~~~~sddp~~~~~~l~l~~~~~~~~qy~~n~~~a~~~l~~~~~a 81 (302) T PRK08913 2 IMRVATFANSSQMIAGALRTQQTMASLQIQESSGLKSESFAGLGASAQQAVNLQVSVTRAQSYIDAATLAQSKVEVMYSA 81 (302) T ss_pred CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 15754599999999999999999999999971487378866478999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 9999999999999875303776-303567889999999999986300121100135666543223343322211123333 Q gi|254780531|r 81 MSKAIDVMSTIKNKITAGVERG-TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159 (452) Q Consensus 81 l~~~~~~l~r~relavqa~n~~-~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 159 (452) |+++.++++|+|++++++.|++ .+|.+++.|++++++++..++| ++++|+|||+|......|+..... + T Consensus 82 L~~~~~~~~~~~~l~v~a~~~t~~~~~a~a~e~~~~~~~lv~~~N-t~~~GrYlFsGt~t~t~P~~~~~~---------~ 151 (302) T PRK08913 82 VSQIADLVQQLRSSLSAASTGTSTDATSAASSAQQALTQMASLLN-TQYGGQYVFAGADTTTAPVDFSSF---------A 151 (302) T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCEEEECCCCCCCCCEEECCC---------C T ss_conf 999999999999999861489855799999999999999999860-744986255170289887321576---------6 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 32222222221354333332211111111122333223454433222111122221122222222211111111111101 Q gi|254780531|r 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239 (452) Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (452) ..... . ...... .+..... T Consensus 152 ~~~~~--------------------~---------------~~~~~~--~~~~g~~------------------------ 170 (302) T PRK08913 152 SVAGD--------------------S---------------ASSADT--SYYVGDD------------------------ 170 (302) T ss_pred CCCCC--------------------C---------------CCCCCC--EEEECCC------------------------ T ss_conf 55677--------------------7---------------765553--2773587------------------------ Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 00112221012333344332222233222221000001223444432110012332111000000001111111122344 Q gi|254780531|r 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319 (452) Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (452) ......+... ....... ... +. T Consensus 171 ----~~~~~~i~~~------------~~~~~~~--------~a~--~~-------------------------------- 192 (302) T PRK08913 171 ----ELTSVRVSAT------------QSVAYGV--------TAD--NS-------------------------------- 192 (302) T ss_pred ----CEEEEEECCC------------CEEECCC--------CCC--CH-------------------------------- T ss_conf ----2578885587------------4032377--------888--47-------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 44332232223332222210000012233444321000000578999999999999999999878999999999999999 Q gi|254780531|r 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399 (452) Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~~~ 399 (452) .......... ............+..++..|+.++++|...|+++|+++||+|...+.++.. T Consensus 193 ----------------~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~l~~a~~~l~~~~a~lG~~~~rle~~~~~~~~~ 253 (302) T PRK08913 193 ----------------AFEDVMRALM---LVANSSSLSSSTLSSALDLASTATDDLGDVQSRLSNAASRITAASSLQTEY 253 (302) T ss_pred ----------------HHHHHHHHHH---HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf ----------------8999999999---764478754799999999999999999999999809999999999878999 Q ss_pred HHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 9999973062220258999999999999999999999999720688987525 Q gi|254780531|r 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 400 ~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) ...++..+|.+||+|++|++++|+.+|+.+||+.++.++..+ ||||. T Consensus 254 ~~~l~~~~s~ledvD~aea~t~l~~~~~~lqAs~~~~ari~q-----lSL~d 300 (302) T PRK08913 254 KSFAETLLGDLTDVDVAAVTAQLSTYQAQLTASYSAISKMKS-----LNLAS 300 (302) T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCHHH T ss_conf 999999988635759999999999999999999999998605-----60862 No 26 >PRK08412 flgL flagellar hook-associated protein FlgL; Validated Probab=100.00 E-value=1.4e-45 Score=297.96 Aligned_cols=142 Identities=12% Similarity=0.145 Sum_probs=132.7 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 40457999999999999999999999998512236883138999999999999999999999989999999999999999 Q gi|254780531|r 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82 (452) Q Consensus 3 ~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l~ 82 (452) ||-.+..+..-++++.+.+++|.++++|||||+||+.|+|||+++.+.+|||.++..++||++|++.|+++++.+|.+|. T Consensus 2 rvt~~~~~~~~~~~~~~~~~~l~~~~~q~ssg~kI~~~~dd~~~~~~~~~l~~~i~~l~q~~~~~~~a~~~~~~td~aL~ 81 (777) T PRK08412 2 RVTFGSKYNQMNNYQNALQNKLNDANTQIASGLKIQYGYQDSDINNQNLKLQYEENTLDQGIDVAQNAYTSTLNTDKALQ 81 (777) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 31221338999998878899999999986426723364547466655531566776578999878879999987999999 Q ss_pred HHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC Q ss_conf 99999999999875303776---3035678899999999999863001211001356665432233 Q gi|254780531|r 83 KAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145 (452) Q Consensus 83 ~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~ 145 (452) +++++|+|+|||+|||+|++ .+|++|+.|+++|+++|++|| +|.++|+|||+|+.....|+. T Consensus 82 e~~~~l~~~k~~~vqaand~~~~~sr~aia~el~~lk~~~~~ia-nt~~~g~~lf~G~~~~~kpf~ 146 (777) T PRK08412 82 EFSKTMEAFKTKLIQAANDVHSETSREAIANDLERLKEHMINIA-NTSIGGEFLFGGSKVDRPPFD 146 (777) T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCCCCEEEECCCCCCCCCCC T ss_conf 99999999999999860256887789999999999999998642-255676798625545668646 No 27 >TIGR02550 flagell_flgL flagellar hook-associated protein 3; InterPro: IPR013384 FlgL (or HAP3) proteins are flagellar hook-associated proteins encoded in bacterial flagellar operons. An N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved in this family, though members show considerable length heterogeneity between these two well-conserved terminal regions - proteins in this family range from 287 to more than 500 residues in length. ; GO: 0001539 ciliary or flagellar motility, 0009424 flagellin-based flagellum hook. Probab=100.00 E-value=2.7e-36 Score=239.55 Aligned_cols=384 Identities=14% Similarity=0.082 Sum_probs=237.8 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 40457999999999999999999999998512236883138999999999999999999999989999999999999999 Q gi|254780531|r 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82 (452) Q Consensus 3 ~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l~ 82 (452) +|.+++.+...++++.+.+.++.+.++|++|||||.+|+|||+++.++++++.....++||.+|+..+.+||+.+|+.|. T Consensus 1 r~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~g~~~~~~sddp~~~~~~~~~~~~~~~~~q~~~n~~~~~~~l~~~~~~l~ 80 (393) T TIGR02550 1 RVSTNMLYNNSLNSITNNQSRLAKLQQQLSSGKRINKPSDDPVAAAQALNLNQELAQLEQYQKNIDDAKNWLSQTETALS 80 (393) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 96513567777777777777888877776420110244222578888887777777766666667777766665544444 Q ss_pred HHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCC Q ss_conf 99999999999875303776---30356788999999999998630012110013566654322334332221-112333 Q gi|254780531|r 83 KAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGS-FIRDDN 158 (452) Q Consensus 83 ~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~-~~~~~~ 158 (452) ++.+.++|+||+++++.|++ .+|.+++.|++++++++..++|.++.+|+|+|.|......++........ .+.... T Consensus 81 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~~~~~~~l~~~an~~d~~g~y~f~g~~~~~~pf~~~~~~~~~~~~g~~ 160 (393) T TIGR02550 81 SVGDLLQRARELAVQAANGTLSDDDRKAIAKEIKQLLDQLLSLANTKDGNGRYIFSGTKTDTPPFSEDGGGSGVTYAGDG 160 (393) T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 45677888888887642255787789999999999998777641011357632204655565553214665431003653 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 33222222222135433333221111111112233322345443322211112222112222222221111111111110 Q gi|254780531|r 159 GKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238 (452) Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (452) ....................... .... .. .......... . .. .. . . ... ............ T Consensus 161 -~~~~~~~~~~~~~~~~~g~~~~~-~~~~-~~-~~~~~~~~~~-~-~~-~~-~-~-~~~-~~~~~~~~~~~~-------- 221 (393) T TIGR02550 161 -QRIVQVASSRSMPIGLPGDKVFM-SIPN-DG-YVVNAAASQT-D-LL-AA-I-L-VDT-IGRYTFVDPLEA-------- 221 (393) T ss_pred -CCCEEEECCCCCCCCCCCCHHCC-CCCC-CC-CCCCCCCCCC-C-CH-HH-H-C-CCC-CCCCCCCCCCCC-------- T ss_conf -00012302341013444200101-2443-32-2110001121-1-00-00-0-0-110-112111112222-------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 10011222101233334433222223322222100000122344443211001233211100000000111111112234 Q gi|254780531|r 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318 (452) Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (452) . ...... .. .. .. . . .............. ...... .. . . ... T Consensus 222 ---~-~~~~~~-~~---~~-~~-~-~-~~~~~~~~~~~~~~-~~~~~~------------~~------~-~----~~~-- 263 (393) T TIGR02550 222 ---G-LELLGV-LA---ND-AV-S-A-TDIITESLEIGTTG-IKIKLN------------DE------L-S----SVL-- 263 (393) T ss_pred ---C-HHHHCC-CC---CC-CC-C-C-CCCHHHHHHCCCCC-CCCCCC------------CC------C-C----CCC-- T ss_conf ---0-011000-01---01-00-0-0-00000000002121-123332------------10------0-0----100-- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 444332232223332222210000012233444321---00000057899999999999999999987899999999999 Q gi|254780531|r 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA---YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395 (452) Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~ 395 (452) . . . ..+........................... ..........+..+|.+++++...|+.+|+++|+++..... T Consensus 264 ~-~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 340 (393) T TIGR02550 264 T-G-L-APPGNLEKSVFSTGDDLFAALKSLEDALSSGDQAAILAALSASLNELDKALDNVLSARAEVGARLNRLELLESR 340 (393) T ss_pred C-C-C-CCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 0-1-2-21001101210025789999887654202320356677777887667767766666555543356666666654 Q ss_pred HHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 99999999973062220258999999999999999999999999720688987525 Q gi|254780531|r 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 396 ~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) +......+++.+|+++|+|+++++++|.+.+..+||++..+++..+ ++||. T Consensus 341 ~~~~~~~~~~~~s~~~d~d~~~~i~~~~~~~~~~~a~~~~~~~~~~-----~sl~~ 391 (393) T TIGR02550 341 LSEQKLVLTEVLSDLEDVDLAEAISDLTMQQSALQAALKAFAKIQQ-----LSLFD 391 (393) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHH T ss_conf 3444556666655544102678888888889999999987666520-----02220 No 28 >pfam00669 Flagellin_N Bacterial flagellin N-terminal helical region. Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700. Probab=100.00 E-value=2.2e-36 Score=240.00 Aligned_cols=135 Identities=31% Similarity=0.411 Sum_probs=131.6 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 04579999999999999999999999985122368831389999999999999999999999899999999999999999 Q gi|254780531|r 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSK 83 (452) Q Consensus 4 i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l~~ 83 (452) |+||+.++++|++|++.+.+|.++|+||||||||++|+|||++++++++|+.++..++||.+|+.++.+||+++|++|++ T Consensus 1 I~tN~~a~~al~~l~~~~~~l~~~~~qlSTGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~N~~~a~~~l~~~e~al~~ 80 (139) T pfam00669 1 ISTNALALAARRTLNRNQAELQKAQEELSTGLRIDSALDLGAGTAISVSLRSQIRGLSQAVRNNNLGISRLQTAQGALSE 80 (139) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 96519999999999999999999999987268457844269999999999999999999999899999999978899999 Q ss_pred HHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC Q ss_conf 9999999999875303776---303567889999999999986300121100135666 Q gi|254780531|r 84 AIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138 (452) Q Consensus 84 ~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~ 138 (452) +.++|.|||||+|+++|++ .||.+++.|+++|+++|..++|+++|+|+|||+|+. T Consensus 81 i~~~l~r~kel~v~a~n~~~~~~dr~ai~~Ei~~l~~~i~~~an~t~~nG~~lFsGt~ 138 (139) T pfam00669 81 VTDILQRLRELAVQAANGGNSDIDRASAQAEIQQLTSELNNIANTTSFNGEYLFSGTN 138 (139) T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC T ss_conf 9999999999999884689999999999999999999999999857718730128969 No 29 >PRK06008 flgL flagellar hook-associated protein FlgL; Validated Probab=100.00 E-value=8.5e-34 Score=224.24 Aligned_cols=343 Identities=14% Similarity=0.149 Sum_probs=225.6 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 74045799999999999999999999999851223688313899999999999999999999998999999999999999 Q gi|254780531|r 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81 (452) Q Consensus 2 ~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l 81 (452) ++|+|-.....-...+.+.|.+|.+++++++||||...+.+.|....+++.|+..+..+++|+++...+..||...+.+| T Consensus 4 ~~Ist~~~~~~lr~~~~~~q~~l~~~~~E~sTG~~ad~~~~lg~~~~~~~~l~~~~~~~~~~~~~~~~~~~rl~~~q~aL 83 (348) T PRK06008 4 SFISTYALQNALRLTIAKLQAELVKAQTEATTGRYADVGLSLGSKTGRSVSLRREYDRLASLTDSNSLVTQRLTATQTAL 83 (348) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 00128999999999999999999999998713710565431126689999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 99999999999987530377630356788999999999998630012110013566654322334332221112333332 Q gi|254780531|r 82 SKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV 161 (452) Q Consensus 82 ~~~~~~l~r~relavqa~n~~~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (452) +++.+..+++++..+.+.++..+...++.|+++.++++..++| ++++|+|||.|......|........+..... + T Consensus 84 ~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~lv~~lN-t~~~G~yLFaG~~tdt~P~~d~~~~~s~~~~~---~ 159 (348) T PRK06008 84 GQLIDAAQSFLNDLLAANASAETGSVVAQSARSALSSLTSTLN-TSVNGEYLFAGINTDVKPLTDYTAPGSAAKTA---V 159 (348) T ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCCCEEEECCCCCCCCCCCCCCCCCCCCHHH---H T ss_conf 9999999999999982468886088999999999999999872-65388522268678988753345676520244---7 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 22222222135433333221111111112233322345443322211112222112222222221111111111110100 Q gi|254780531|r 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241 (452) Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (452) +... ....+..... ............. + ... .....+.. T Consensus 160 ----------------d~~~--~~~~~~~~~~--~~~a~it~~~~~~-~------~~~--------------~~~~~f~~ 198 (348) T PRK06008 160 ----------------DTAF--QTFFGFAQDD--PAVSNITAAQMQT-F------LDG--------------TFAPLFND 198 (348) T ss_pred ----------------HHHH--HHHHCCCCCC--CCHHHCCHHHHHH-H------CCC--------------CCCCCCCC T ss_conf ----------------7777--6540367776--2043200566643-3------046--------------42113467 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 11222101233334433222223322222100000122344443211001233211100000000111111112234444 Q gi|254780531|r 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321 (452) Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (452) . .+...-....... .......... ... .. T Consensus 199 ~---~~~~~~s~as~~~-------------------~~~~I~~~~~-------------------v~~----------s~ 227 (348) T PRK06008 199 A---NWSANWSSASDTN-------------------ITSRISPTET-------------------AET----------ST 227 (348) T ss_pred C---CCCCCCCCCCCCC-------------------CCEECCCCCE-------------------EEC----------CC T ss_conf 6---3011435577765-------------------2101378863-------------------303----------66 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 33223222333222221000001223344432100000057899999999999999999987899999999999999999 Q gi|254780531|r 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401 (452) Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~~~~~ 401 (452) ........ .........................+..++..++.+++++...|+++|++++|+|...+.++.... T Consensus 228 ~An~~~~r------~~~~~~~~~a~~~~~~l~~~a~~~~~~~a~~~l~~a~~~l~~~ra~lG~~q~rie~a~~r~~~~~~ 301 (348) T PRK06008 228 SANAEGFR------KLAMAYVMVSELGDIGLSSEAQQTVTDKAITLTGQAITGLTTQQATLGLAQSRVKKANTRLDAQIK 301 (348) T ss_pred CCCCHHHH------HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 78868899------999999998502578898678999999999999999999999999865999999999998999999 Q ss_pred HHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 99973062220258999999999999999999999999720688987525 Q gi|254780531|r 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 402 ~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) .++..++.+||+|++|++++|+.+|+.+||+.++.++-.+ ||||. T Consensus 302 ~l~~~~s~le~vD~~Ea~t~l~~~q~qLeasy~~tarl~~-----LSL~n 346 (348) T PRK06008 302 LLKGQILDLEGVDPYEASTRVNALQTQIETSYSLTSQLQQ-----LSLVN 346 (348) T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CHHHH T ss_conf 9999987421768999999999999999999999999851-----32974 No 30 >pfam07164 consensus Probab=100.00 E-value=6.9e-33 Score=218.68 Aligned_cols=342 Identities=15% Similarity=0.146 Sum_probs=222.8 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 74045799999999999999999999999851223688313899999999999999999999998999999999999999 Q gi|254780531|r 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81 (452) Q Consensus 2 ~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l 81 (452) ++|+|-........++.+.|.+|.+++++++|||+...|++.|....+.+.|+..+..+++|+++...+..||...+.+| T Consensus 4 ~~ist~~~~~~~r~~~~r~Q~~l~~~~~E~sTG~~ad~~~~lg~~~~~~~~L~~~~~~l~~~~~~~~~a~~rl~~~q~aL 83 (347) T pfam07164 4 SFISTLALQNAMRSTILKNQAELVKAQTEATTGRHADVGLALGARTARSVSLRRDLDRLSVLVDTNSLVTQRLAATQTAL 83 (347) T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 20218988989999999999999999998703820564001033389999899999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 99999999999987530377630356788999999999998630012110013566654322334332221112333332 Q gi|254780531|r 82 SKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV 161 (452) Q Consensus 82 ~~~~~~l~r~relavqa~n~~~dr~a~~~e~~~l~~~i~~ian~t~~nG~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (452) ++|.+.++++|+..+.+.+++.....++.+.++.++++..++| ++++|+|||.|......|....... .. T Consensus 84 ~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~li~~LN-t~~~GryLFaG~~Td~~Pl~~~~~~---------~~ 153 (347) T pfam07164 84 GQMAEAAQEFLKDLVTATSSDAPTLTVVSQASSALQNFTSALN-TSFNGEYLFAGINTDVKPIDDYADG---------SA 153 (347) T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH-CCCCCEEEECCCCCCCCCCCCCCCC---------CC T ss_conf 9999999999999984068985179999999999999999984-3508852326867898865245767---------53 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 22222222135433333221111111112233322345443322211112222112222222221111111111110100 Q gi|254780531|r 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241 (452) Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (452) ........ .. ..++... ..... .......... .....+ ...+.. T Consensus 154 ~~~~~~~~------~~-------~~~~~~~------~~~~~-a~~t~~~~~~---~~~~~~-------------~~~~~~ 197 (347) T pfam07164 154 AKNAVDTA------FA-------AAFGFAQ------TDPSV-ASITKAQMED---FLTTTF-------------AAQFND 197 (347) T ss_pred CCCHHHHH------HH-------HHHHCCC------CCCHH-HHHHHHHHHH---HHCCCC-------------CCCCCC T ss_conf 20002368------88-------8760367------87015-4411777765---533543-------------212455 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 11222101233334433222223322222100000122344443211001233211100000000111111112234444 Q gi|254780531|r 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321 (452) Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (452) . .+...... ..... ........... ... T Consensus 198 ~---~~~~~~s~--------~s~~~-----------~~~~is~~e~~------------------------------~~~ 225 (347) T pfam07164 198 A---FWATNWSK--------ASDQN-----------MTSRISTTEVA------------------------------DTS 225 (347) T ss_pred C---CCCCCCCC--------CCCCC-----------CCCCCCCCCEE------------------------------EEC T ss_conf 4---20145555--------77776-----------55103688446------------------------------304 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 33223222333222221000001223344432100000057899999999999999999987899999999999999999 Q gi|254780531|r 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401 (452) Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~~~~~ 401 (452) .. ......................+.........+..++..|+.+++.+...|+++|++++|+|...+.++.... T Consensus 226 ~~-----An~~~~r~~~~~~~~~~~~~~~~ls~~~~~~~~~~a~~~l~~a~~~l~~~~a~lG~~q~rie~a~~r~~~~~~ 300 (347) T pfam07164 226 TS-----ANSDGFRKFALAAVMVMELMDPKLSSEAFDMVVTKALGLIGQAITGLTQEQSTLGLSQSRVSKATTSLKAQQK 300 (347) T ss_pred CC-----CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 65-----7728899999999998732577878789999999999999999999999999863899889999998999999 Q ss_pred HHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 99973062220258999999999999999999999999720688987525 Q gi|254780531|r 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 402 ~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) .++..+++|||+|++|++++|+.+|+++|++.++.++-.+ |||+. T Consensus 301 ~l~~~~~~le~vD~aEa~trl~~~q~qLeasy~vtarl~~-----LSL~n 345 (347) T pfam07164 301 ILNTHILDLEGVDPYEASTRVNTLQTQIETSYSLTSRLQK-----MSLIN 345 (347) T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHH T ss_conf 9999987411658999999999999999999999999834-----23974 No 31 >pfam00700 Flagellin_C Bacterial flagellin C-terminal helical region. Flagellins polymerize to form bacterial flagella. There is some similarity between this family and pfam00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate and this is shown to be correct as structurally this family forms an extended helix that interacts with pfam00700. Probab=99.83 E-value=2.5e-20 Score=141.93 Aligned_cols=82 Identities=26% Similarity=0.377 Sum_probs=77.9 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99999999999999999878999999999999999999997306222025899999999999999999999999972068 Q gi|254780531|r 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444 (452) Q Consensus 365 l~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~ 444 (452) |..||.|+++|...|+++||++|||+...+++....++++.++|+|+|+|||||+++|++.|+++||+.+|++|||| T Consensus 1 i~~id~Ai~~v~~~ra~lGa~qnRl~~~~~~l~~~~~n~~~a~s~i~D~D~Aee~t~l~~~qil~qas~a~~aqanq--- 77 (84) T pfam00700 1 IDILDEAITQLTSQRSDLGAVQNRLESANTNLKNQSDNLKAAISRIEDVDPAEASTRVTKLQILLQASYALTAQANQ--- 77 (84) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--- T ss_conf 91889999999999998859999999999889999999999998866650999999999999999999999999867--- Q ss_pred HHHHHHC Q ss_conf 8987525 Q gi|254780531|r 445 RILSLFR 451 (452) Q Consensus 445 ~vL~L~~ 451 (452) |+||. T Consensus 78 --lslln 82 (84) T pfam00700 78 --LSLLN 82 (84) T ss_pred --HHHHH T ss_conf --88886 No 32 >PRK12688 flagellin; Reviewed Probab=99.67 E-value=2.1e-15 Score=111.72 Aligned_cols=100 Identities=21% Similarity=0.318 Sum_probs=94.0 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 97404579999999999999999999999985122368831389999999999999999999999899999999999999 Q gi|254780531|r 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80 (452) Q Consensus 1 m~~i~tn~~~~~al~~l~~~~~~l~~~~~qlstGkri~~~sDdp~~~~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~ 80 (452) |.+|.-......-|.+|+..-.-|...|+|||||||||++-|+|..++.+..|.++.+.+.-..+-|..+...||.+... T Consensus 1 MS~IvLS~avRQNLlSLQsTAdLLATTQsRLssGKKVNtALDNPTNFFTAagLdsRaSdInnLLDGI~NGVQilQAANTG 80 (888) T PRK12688 1 MSGVVLSNAVRQNLSSLQATADLLATTQSRLSSGKKVNTALDNPTNFFTAASLDSRASDINNLLDGIGNGVQILQAANTG 80 (888) T ss_pred CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHCCC T ss_conf 97344178887677777778999988777652366122123687531100123410456777775212255533454036 Q ss_pred HHHHHHHHHHHHHHHHHHCC Q ss_conf 99999999999998753037 Q gi|254780531|r 81 MSKAIDVMSTIKNKITAGVE 100 (452) Q Consensus 81 l~~~~~~l~r~relavqa~n 100 (452) +....++...+|.+|-||-. T Consensus 81 ITsL~kLvDsaKSIAnQALq 100 (888) T PRK12688 81 ITSLNKLVDSAKSIANQALQ 100 (888) T ss_pred CHHHHHHHHHHHHHHHHHHH T ss_conf 06689999989999998765 No 33 >PRK08471 flgK flagellar hook-associated protein FlgK; Validated Probab=97.85 E-value=0.0019 Score=38.73 Aligned_cols=79 Identities=19% Similarity=0.195 Sum_probs=72.4 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 9999999998789999999999999999999973062220258999999999999999999999999720688987525 Q gi|254780531|r 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 373 ~~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) +-.....+++|..-+..+...+..+.....++..+..+.-+++-||+++|-|.|=-+||+-.+++-|+..-+.+|++=| T Consensus 534 ~~y~~lvs~vG~~~~~a~~~~~~~~~~~~~~~~~r~svSGVnlDEE~~nLik~QqaY~AsArvista~em~dtLL~i~~ 612 (612) T PRK08471 534 EYYRFLTGKIASDTEKNNRINDTNKSLLNSVKKEYQSISGVSTDEELTNLIKFQSSYGAAAKIITTVDQMLDTLLGIKQ 612 (612) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 9999999999999999999999999999999999985106039999999999999999999999999999999982449 No 34 >PRK07521 flgK flagellar hook-associated protein FlgK; Validated Probab=97.59 E-value=0.0046 Score=36.30 Aligned_cols=78 Identities=13% Similarity=0.165 Sum_probs=71.7 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 999999998789999999999999999999973062220258999999999999999999999999720688987525 Q gi|254780531|r 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 374 ~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) -.....+.+|..-+..+...+........++..+..+.-+++.||+++|-+.|--+||+-.++.-++..-+.+|...| T Consensus 405 ~~~~~v~~ig~~~~~a~~~~~~~~~~~~~l~~~r~svSGVnlDEE~~nLi~~Q~aY~AsArvitt~demldtLln~vR 482 (482) T PRK07521 405 LAASSLSWLEQQRSSASSEASYQSALLSRAQEALSNATGVDTDDEMALLLDLEQSYAASAKVISTVDEMLDSLLRAVR 482 (482) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 999999999999999999999999999999999984138059999999999999999999999999999999998519 No 35 >PRK08147 flgK flagellar hook-associated protein FlgK; Validated Probab=97.59 E-value=0.0047 Score=36.29 Aligned_cols=77 Identities=9% Similarity=0.114 Sum_probs=69.6 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99999999987899999999999999999999730622202589999999999999999999999997206889875 Q gi|254780531|r 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449 (452) Q Consensus 373 ~~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L 449 (452) +-.....+.+|...+..+...+..+.....++..+..+.-+++-||+++|-+.|=-+||+-.+++-+++.-+.+|.+ T Consensus 470 ~~~~~~vs~ig~~~~~a~~~~~~~~~~~~~l~~~r~svSGVnlDEE~~nLi~~Q~aY~AsArvist~demldtLlni 546 (547) T PRK08147 470 DAYASLVSDVGNQTATLKTSSTTQANVVTQLTTQQQSVSGVNLDEEYGNLQRFQQYYLANAQVLQTASTLFDALLNI 546 (547) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 99999999999999999999999999999999999843176699999999999999999999999999999998775 No 36 >PRK12714 flgK flagellar hook-associated protein FlgK; Provisional Probab=97.47 E-value=0.0067 Score=35.31 Aligned_cols=79 Identities=19% Similarity=0.259 Sum_probs=73.4 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 9999999998789999999999999999999973062220258999999999999999999999999720688987525 Q gi|254780531|r 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 373 ~~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) +-.....++||+.-...+...+..+.....++.-+..+.-+++-||+++|-|.|=-+||+-.++.-|++.=+.+|..+| T Consensus 546 ~~y~~lvs~vG~~a~~a~~~~~~~~~l~~~~~~~r~SvSGVnlDEE~anLikfQqaY~AaArvIttadem~dtLL~~vR 624 (624) T PRK12714 546 GALSGLTTSVGSAARAANYSADAQKVINDQAQASRDSISGVNLDEEAADMLKLQQAYQAAAQMISTADTMFQAILGAVR 624 (624) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 9999999999999999999999999999999999870306168999999999999999999999999999999998519 No 37 >PRK07191 flgK flagellar hook-associated protein FlgK; Validated Probab=97.02 E-value=0.02 Score=32.39 Aligned_cols=76 Identities=20% Similarity=0.202 Sum_probs=68.3 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9999999987899999999999999999999730622202589999999999999999999999997206889875 Q gi|254780531|r 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449 (452) Q Consensus 374 ~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L 449 (452) -.....+.+|...++.+...+..+.....++..+..+.-+++-||+++|-+.|--+||+-.+++-+++.-+.+|.+ T Consensus 380 ~~~~lvs~ig~~~~~a~~~~~~~~~~~~~~~~~r~svsGVnlDEE~~nLi~~Q~aY~AsArvitt~demldtLln~ 455 (456) T PRK07191 380 AATALVGYIAITSNQNHSELENAENVRNQAERYWESFSGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLLAL 455 (456) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999999999999999999999999846581789999999999999999999999999999999953 No 38 >PRK06945 flgK flagellar hook-associated protein FlgK; Validated Probab=96.94 E-value=0.024 Score=31.92 Aligned_cols=79 Identities=11% Similarity=0.187 Sum_probs=74.2 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9999999999878999999999999999999997306222025899999999999999999999999972068898752 Q gi|254780531|r 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450 (452) Q Consensus 372 ~~~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~ 450 (452) .+-.....++||+.-...+...+..+.+...++.-+..+.-+.+-||+++|-|.|=.+||+-.++.-+++.-+-+|.+| T Consensus 571 ~~~y~~~vs~iG~~a~~a~~~~~~q~~l~~~~~~~r~SvSGVnlDEEl~nLikyQqaY~AaArvItt~deMldtLl~i~ 649 (649) T PRK06945 571 TGAYAQLVNDIGNKASQLKVSSAAQTALLTQITTAQQSVSGVNLDEEAANLLQYQQLYQANAKVIQTASTLFDTLLGIF 649 (649) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 9999999999999999999999999999999999997440613999999999999999999999999999999999539 No 39 >PRK06665 flgK flagellar hook-associated protein FlgK; Validated Probab=96.62 E-value=0.042 Score=30.43 Aligned_cols=77 Identities=9% Similarity=0.098 Sum_probs=70.7 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99999999998789999999999999999999973062220258999999999999999999999999720688987 Q gi|254780531|r 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448 (452) Q Consensus 372 ~~~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~ 448 (452) .+-.....+++|..-+..+...+..+.+...++..+..+.-+++-||+++|-|.|--+||+-.+++-+++.=+.+|+ T Consensus 548 ~d~y~~lv~~vG~~~~~a~~~~~~~~~l~~~~~~~r~svSGVnlDEE~anLikfQqaY~AsArvIst~dem~dtLln 624 (628) T PRK06665 548 DDFFANTASNIGIKGQIAEITKNSQNQILKELTDMRQSVSGVNKDEELANMIEFQQSYNASAKFINVSNELLDTIIN 624 (628) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999999999999999999999987636029999999999999999999999999999999987 No 40 >TIGR02492 flgK_ends flagellar hook-associated protein FlgK; InterPro: IPR002371 Within the bacterial flagellum, the basal-body rod, the hook, the hook- associated proteins (HAPs), and the helical filament together constitute an axial substructure whose elements share structural features and a common export pathway . The amino acid sequences of the hook protein and of the three hook-associated proteins of Salmonella typhimurium have been deduced from the DNA sequences of their structural genes (flgE, flgK, flgL and fliD respectively). These sequences have been compared with each other and with those for the filament protein (flagellin) and four rod proteins. The hook protein was found to be most similar to the distal rod protein (FlgG) and the proximal hook-associated protein (HAP1), which are thought to be attached to the proximal and distal ends of the hook, the similarities being most pronounced near the N- and C-termini. It is thought that the axial proteins may adopt amphipathic alpha-helical conformations at their N- and C-termini. These regions of the filament and hook are believed to be responsible for quaternary interactions between subunits. Interaction between N- and C-terminal alpha-helices may be important in the formation of the axial structures of the flagellum. Although consensus sequences have been noted, no consensus extends to the entire set of axial proteins. Thus the basis for recognition of a protein for export by the flagellum-specific pathway remains to be identified.; GO: 0005198 structural molecule activity, 0009296 flagellum biogenesis, 0009424 flagellin-based flagellum hook. Probab=96.50 E-value=0.05 Score=29.98 Aligned_cols=80 Identities=15% Similarity=0.184 Sum_probs=74.6 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99999999999987899999999999999999999730622202589999999999999999999999997206889875 Q gi|254780531|r 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449 (452) Q Consensus 370 ~a~~~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L 449 (452) ...+......++||...++.+...+..+.+...++..++.+.-+-+-||+++|-+.|=-++|+..+++-+++.=+.||.+ T Consensus 416 ~~~~~y~~~~s~~g~~~~~a~~~~~~~~~~l~~~~~~~~s~sGVs~DEE~~~l~~~Q~~Y~A~ak~i~t~d~m~d~LL~~ 495 (495) T TIGR02492 416 SLDDFYASLVSQIGSDASQAESALEAQEALLNQLQEARSSISGVSLDEEMANLIQYQKAYQASAKVISTVDEMLDSLLNL 495 (495) T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 38999988778999999998888888999999999988764166799999999999988999999999999999999639 No 41 >PRK07739 flgK flagellar hook-associated protein FlgK; Validated Probab=96.42 E-value=0.057 Score=29.66 Aligned_cols=74 Identities=14% Similarity=0.224 Sum_probs=65.8 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99999999878999999999999999999997306222025899999999999999999999999972068898 Q gi|254780531|r 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447 (452) Q Consensus 374 ~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL 447 (452) -.....+.+|......+...+..+.....++..+..+.-+|+.||+++|-+.|--+||+-.+++-+++.=+.+| T Consensus 419 ~~~~~v~~vg~~~~~a~~~~~~~~~~~~~~~~~~~s~SGVnlDEE~~nLi~~Q~aYqAnAkvItt~demldtLl 492 (500) T PRK07739 419 FYQSLIGKLGVDAQEANRMAENSEVLVDQVDNRRQSVSAVSLDEEMTNMIQFQHAYNAAARMITAIDEMLDKII 492 (500) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999999999999999999998712966999999999999999999999999999999999 No 42 >COG1256 FlgK Flagellar hook-associated protein [Cell motility and secretion] Probab=95.75 E-value=0.12 Score=27.69 Aligned_cols=81 Identities=14% Similarity=0.167 Sum_probs=70.5 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99999999999878999999999999999999997306222025899999999999999999999999972068898752 Q gi|254780531|r 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450 (452) Q Consensus 371 a~~~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~ 450 (452) ..+-.....+.||-..+..+...+..+.+...++..+..+.-+++-||+++|.+.|=-++|+..++..+++.=.-+|.++ T Consensus 472 ~~d~y~~l~~~i~~~~~~a~~~~~~~~~~l~~~~~~~~S~SGVnlDEE~anLi~~Qq~Y~AsAKvI~tvd~m~dtLln~~ 551 (552) T COG1256 472 FSDYYAGLVGWIGIKASTASSESDAKEALLNQLTSERQSISGVNLDEEMANLIQFQQAYQASAKVIQTVDEMLDTLLNIV 551 (552) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 99999988899999888741121479999999999986013778779999999999999999999999999999998642 Q ss_pred C Q ss_conf 5 Q gi|254780531|r 451 R 451 (452) Q Consensus 451 ~ 451 (452) + T Consensus 552 ~ 552 (552) T COG1256 552 G 552 (552) T ss_pred C T ss_conf 9 No 43 >PRK06799 flgK flagellar hook-associated protein FlgK; Validated Probab=94.92 E-value=0.22 Score=26.04 Aligned_cols=75 Identities=15% Similarity=0.146 Sum_probs=64.7 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 999999878999999999999999999997306222025899999999999999999999999972068898752 Q gi|254780531|r 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450 (452) Q Consensus 376 ~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~ 450 (452) ....+.+|...++.....+........++..+..+.-+|+-||+++|-+.|--+||+..+++-+++.=+.+|.+. T Consensus 357 ~~~v~~~~~~~~~a~~~~~~~~~~~~~~~~~r~svsGVnlDEE~~nLl~~QqaY~A~AkvIst~demldtLLniv 431 (431) T PRK06799 357 DQFIVGVASDKSAVNAYQKIHTDLLEGIQQEKMSLEGVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSII 431 (431) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 999999999999999999999999999999998253838889999999999999999999999999999998439 No 44 >PRK12715 flgK flagellar hook-associated protein FlgK; Provisional Probab=93.50 E-value=0.44 Score=24.22 Aligned_cols=80 Identities=11% Similarity=0.138 Sum_probs=73.8 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 99999999998789999999999999999999973062220258999999999999999999999999720688987525 Q gi|254780531|r 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 372 ~~~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) .+......++||..-+..+...+..+.+...+++.+-.+.-+.+-||+++|-|.|=-+||+-.+++-|++.=+-+|.++| T Consensus 570 ~d~Y~~lvs~vG~~t~~A~~~~~~~~~l~~q~~~~r~SvSGVNLDEE~aNLi~fQqaY~AsArvIsta~emfDtLLn~vR 649 (649) T PRK12715 570 FDRYGSLLAEVGGRTNQAKTSFESADILHKQALDFQDSKSGVNLDEEGANLLVFQQAYQAAGKLMEISNQIMNLLFDIMR 649 (649) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 99999999999999999999899999999999999860315168899999999999999999999999999999998539 No 45 >PRK08871 flgK flagellar hook-associated protein FlgK; Validated Probab=92.80 E-value=0.56 Score=23.58 Aligned_cols=77 Identities=13% Similarity=0.217 Sum_probs=66.5 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99999999987899999999999999999999730622202589999999999999999999999997206889875 Q gi|254780531|r 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449 (452) Q Consensus 373 ~~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L 449 (452) +-.....+++|+.-...+...+..+.....++.-+..+.-+++-||+++|-|.|=.+||+-.++.-+++.-+.+|.+ T Consensus 549 d~y~~lvs~iG~~~~~a~~~~~~~~~~~~~~~~~~~svSGVnlDEEl~nLikyQqaY~AaArvItt~demldtLlni 625 (626) T PRK08871 549 DLYHNLNTEVGLKKATATRLAEVARLEKEAAQSRVASISGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTILQL 625 (626) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 99999999999999999999999999999999998601150399999999999999999999999999999998775 No 46 >PRK12632 flgC flagellar basal body rod protein FlgC; Provisional Probab=92.79 E-value=0.32 Score=25.04 Aligned_cols=43 Identities=14% Similarity=0.207 Sum_probs=39.6 Q ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 2220258999999999999999999999999720688987525 Q gi|254780531|r 409 RLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 409 ~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) ..-++|+++||++|-..+-.+||-+.++..+.+.-+..|.|+| T Consensus 87 ~~pnVd~~~EMvdm~~AsRsYeANv~v~~t~k~M~~~~L~i~r 129 (130) T PRK12632 87 DGSNVDLVIEIADAREAQRSYEANLRMFDQARQMSSSLLDLLR 129 (130) T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 6899788999999999999999999999999999999999842 No 47 >PRK12782 flgC flagellar basal body rod protein FlgC; Reviewed Probab=91.98 E-value=0.47 Score=24.06 Aligned_cols=47 Identities=15% Similarity=0.242 Sum_probs=42.1 Q ss_pred HHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 73062220258999999999999999999999999720688987525 Q gi|254780531|r 405 KGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 405 ~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) .+.-..-++|+++||++|-..+-.+||-+.++..+.+..+..|.|+| T Consensus 91 ~GyV~~pnVn~~~EMvdm~~AsRsYeANv~v~~tak~m~~~tL~i~r 137 (138) T PRK12782 91 NGYVKLPNVNMLIEMADMREANRSYEANLQVIKQARAMVSMTIDLLR 137 (138) T ss_pred CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 78854689888999999999999999999999999999999999850 No 48 >PRK05681 flgC flagellar basal body rod protein FlgC; Reviewed Probab=91.81 E-value=0.53 Score=23.71 Aligned_cols=47 Identities=11% Similarity=0.185 Sum_probs=41.3 Q ss_pred HHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 30622202589999999999999999999999997206889875259 Q gi|254780531|r 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452 (452) Q Consensus 406 ~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~~ 452 (452) +.-..-++|+++||++|-..+-.+||-+.++..+.+.-+..|.|+|+ T Consensus 93 GyV~~pNVd~~~Emvdm~~A~R~YeAN~~~~~~~k~m~~~~L~igk~ 139 (139) T PRK05681 93 GYVKYPNVNVVVEMVDMISASRSYEANVEVLNAAKSMMQKTLTIGQS 139 (139) T ss_pred CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 71542898889999999999999999999999999999999987439 No 49 >PRK12631 flgC flagellar basal body rod protein FlgC; Provisional Probab=88.68 E-value=1.3 Score=21.32 Aligned_cols=46 Identities=13% Similarity=0.129 Sum_probs=38.4 Q ss_pred HHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 3062220258999999999999999999999999720688987525 Q gi|254780531|r 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 406 ~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) +.-..-++|+.+||++|-..+-.+||-+.++..+.+.-+.-|.|.| T Consensus 93 GyV~~pNVd~~~EMvdm~~A~RsYeANv~~~~~ak~m~~~aL~Igk 138 (138) T PRK12631 93 GFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTLRMGK 138 (138) T ss_pred CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 8884489888999999999999999999999999999999997459 No 50 >PRK12629 flgC flagellar basal body rod protein FlgC; Provisional Probab=88.62 E-value=1.3 Score=21.25 Aligned_cols=47 Identities=19% Similarity=0.157 Sum_probs=39.4 Q ss_pred HHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 73062220258999999999999999999999999720688987525 Q gi|254780531|r 405 KGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 405 ~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) .+.-..-++|+.+||++|-..+=.+||-++++..+.+.-+..|.|.| T Consensus 89 ~GyV~~pnVn~~~EMvdm~~AsRsYEANv~~~~~aK~m~~~aL~igr 135 (135) T PRK12629 89 DGYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALATLTMGR 135 (135) T ss_pred CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 98884689888999999999999999999999999999999998559 No 51 >PRK12624 flgB flagellar basal body rod protein FlgB; Provisional Probab=88.40 E-value=1.2 Score=21.62 Aligned_cols=37 Identities=19% Similarity=0.209 Sum_probs=30.4 Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 0258999999999999999999999999720688987 Q gi|254780531|r 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448 (452) Q Consensus 412 D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~ 448 (452) .+|+-.|+++|++.|+.+|+.++.|+.=-..-..|++ T Consensus 105 nVDid~Em~~la~N~l~Y~al~~~l~~~~~~lr~vIk 141 (143) T PRK12624 105 NVDVEKEVVEASNSQMQYMLMIERLNQNYRLLKQVMR 141 (143) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 2689999999999999999999999978999999973 No 52 >PRK12622 flgB flagellar basal body rod protein FlgB; Provisional Probab=88.32 E-value=1.1 Score=21.70 Aligned_cols=37 Identities=19% Similarity=0.104 Sum_probs=30.8 Q ss_pred EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 2025899999999999999999999999972068898 Q gi|254780531|r 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447 (452) Q Consensus 411 ~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL 447 (452) -.+|+-+|+++|++.|+.+|+.+++++.-...-+.|+ T Consensus 98 NnVDid~Em~~la~N~l~Y~al~~~l~~~f~~l~~vI 134 (135) T PRK12622 98 NNVDIDSEMKALVQNQMMYHLFTNIQAHHFKSVNIVI 134 (135) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 8758899999999999999999999998999999985 No 53 >PRK06797 flgB flagellar basal body rod protein FlgB; Reviewed Probab=88.01 E-value=0.72 Score=22.91 Aligned_cols=26 Identities=15% Similarity=0.254 Sum_probs=23.8 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 25899999999999999999999999 Q gi|254780531|r 413 ADMASESTRLSALQTQQQLAVQALSI 438 (452) Q Consensus 413 ~D~A~e~t~l~~~q~~~Qaa~~~laq 438 (452) +|+-.|+++|.+.++.+||+++.|.- T Consensus 99 VD~d~Em~~~a~N~l~Yqas~~~Ln~ 124 (135) T PRK06797 99 VDVTTEMLDLMKANQLYGISINAINT 124 (135) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 57899999999999999999999825 No 54 >PRK12630 flgC flagellar basal body rod protein FlgC; Provisional Probab=87.49 E-value=1.6 Score=20.74 Aligned_cols=46 Identities=13% Similarity=0.175 Sum_probs=38.2 Q ss_pred HHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 3062220258999999999999999999999999720688987525 Q gi|254780531|r 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 406 ~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) +.-..-++|+.+||++|-..+-.+||-+.++..+.+.-+.-|.|.| T Consensus 98 GyV~~PnVd~~~EMvdm~~AsRsYEANv~v~~~aK~m~~~tL~igk 143 (143) T PRK12630 98 GYVSMPNVNVLNEMADMMASTRSYEANVTAMNAEKSMFSKALEIGK 143 (143) T ss_pred CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 8884689888999999999999999999999999999999998559 No 55 >PRK05683 flgK flagellar hook-associated protein FlgK; Validated Probab=86.87 E-value=1.8 Score=20.53 Aligned_cols=76 Identities=11% Similarity=0.186 Sum_probs=69.1 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9999999998789999999999999999999973062220258999999999999999999999999720688987 Q gi|254780531|r 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448 (452) Q Consensus 373 ~~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~ 448 (452) +-.....++||..-.+.+...+..+.+...++.-+..+.-+++-||+++|-|.|--+||+-.++.-+++.=+-+|. T Consensus 599 d~y~~lvs~vG~~a~~A~~~~~~q~~l~~~~~~~r~SvSGVnlDEE~anLikfQqaY~AaArvItt~deMlDtLln 674 (676) T PRK05683 599 DAYGKLVERVGTLASQARADADATAAVLKQAQDSRDSLSGVSLDEEAANLIKFQQYYTASSQIIKAAQETFDTLIN 674 (676) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999999999999999999999999985625039999999999999999999999999999999973 No 56 >PRK12621 flgB flagellar basal body rod protein FlgB; Provisional Probab=85.71 E-value=2 Score=20.16 Aligned_cols=35 Identities=9% Similarity=0.100 Sum_probs=27.8 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 25899999999999999999999999972068898 Q gi|254780531|r 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447 (452) Q Consensus 413 ~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL 447 (452) +|+-+|+++|.+.++.+|+.++.|+---..-..|+ T Consensus 97 Vdid~Em~~la~N~l~Y~a~~~~l~~~~~~l~~aI 131 (136) T PRK12621 97 VNLDKEMAKMAKNSLQYNALTTVIKGNFEGVKNII 131 (136) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 65489999999999999999999999999999999 No 57 >PRK05680 flgB flagellar basal body rod protein FlgB; Reviewed Probab=84.94 E-value=2.2 Score=19.94 Aligned_cols=35 Identities=20% Similarity=0.118 Sum_probs=27.3 Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 02589999999999999999999999997206889 Q gi|254780531|r 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446 (452) Q Consensus 412 D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~v 446 (452) .+|+-+|+++|.+.++.+|+.++.|+.--..-..| T Consensus 98 ~Vdle~Em~~~a~N~l~Y~a~~~~l~~~~~~l~~a 132 (137) T PRK05680 98 TVDMDVERTEFAKNSLMYQALLTALNGKFKGLMSV 132 (137) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 60879999999999999999999999999999999 No 58 >pfam06429 DUF1078 Domain of unknown function (DUF1078). This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N terminus. Probab=84.10 E-value=2.4 Score=19.71 Aligned_cols=38 Identities=16% Similarity=0.274 Sum_probs=33.7 Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 02589999999999999999999999997206889875 Q gi|254780531|r 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449 (452) Q Consensus 412 D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L 449 (452) .+|+.+|+++|-..|-.+||...++..++..-+.+|.+ T Consensus 2 nV~~~~Em~~mi~~qr~yqa~~k~i~~~~em~~~~~~~ 39 (39) T pfam06429 2 NVDLVEEMVNLIEAQRAYEANAKVIQTADEMLGTLLNL 39 (39) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 88789999999999999899999998899999998763 No 59 >PRK12619 flgB flagellar basal body rod protein FlgB; Provisional Probab=83.23 E-value=2.6 Score=19.49 Aligned_cols=30 Identities=20% Similarity=0.090 Sum_probs=25.0 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 258999999999999999999999999720 Q gi|254780531|r 413 ADMASESTRLSALQTQQQLAVQALSIVNNS 442 (452) Q Consensus 413 ~D~A~e~t~l~~~q~~~Qaa~~~laqan~~ 442 (452) +|+-.|+++|.+.++.+||.++.|+---.. T Consensus 93 VDid~Ema~~a~N~l~Yqa~~~~l~~k~~~ 122 (130) T PRK12619 93 VDKDMETTEFARNALNYQASLSFLNGKIKS 122 (130) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 257999999999999999999999999999 No 60 >PRK12623 flgB flagellar basal body rod protein FlgB; Provisional Probab=83.21 E-value=2.6 Score=19.49 Aligned_cols=35 Identities=17% Similarity=0.108 Sum_probs=27.2 Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 02589999999999999999999999997206889 Q gi|254780531|r 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446 (452) Q Consensus 412 D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~v 446 (452) .+|+-+|+++|.+.++.+|+.++.|+.--..-+.| T Consensus 95 nVDid~Em~~laeN~l~Y~a~~~~l~~k~~~lk~a 129 (131) T PRK12623 95 NVDIDNEMVNQAANTLMYNALITQLNNRLATTRYI 129 (131) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 67799999999999999999999999899999986 No 61 >PRK12625 flgB flagellar basal body rod protein FlgB; Provisional Probab=83.02 E-value=2.7 Score=19.44 Aligned_cols=31 Identities=13% Similarity=0.127 Sum_probs=25.5 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 2589999999999999999999999997206 Q gi|254780531|r 413 ADMASESTRLSALQTQQQLAVQALSIVNNST 443 (452) Q Consensus 413 ~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~ 443 (452) +|+-+|+++|.+.++.+|+.++.|.---..- T Consensus 95 Vdid~Em~~~aeN~l~Y~a~~~~l~~k~~~l 125 (132) T PRK12625 95 VDIQQEQSAFMQNALEYQMSLGFLDSKFSGM 125 (132) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 1479999999999999999999999999999 No 62 >PRK12692 flgG flagellar basal body rod protein FlgG; Reviewed Probab=82.71 E-value=2.7 Score=19.36 Aligned_cols=40 Identities=15% Similarity=0.197 Sum_probs=37.4 Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 0258999999999999999999999999720688987525 Q gi|254780531|r 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 412 D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) .+|+.+||++|-..|=.+|+.+.++.-+.+.-+.+-+|+| T Consensus 223 NVd~~~EMv~mI~~qRafe~n~k~i~~~Dem~~~~~~liR 262 (262) T PRK12692 223 NVDPVKEITELISAQRAFEMNSKVIQAADEMAGTVSKGIR 262 (262) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 5659999999999999999999999999999999997639 No 63 >PRK12685 flgB flagellar basal body rod protein FlgB; Reviewed Probab=79.26 E-value=3.6 Score=18.64 Aligned_cols=37 Identities=14% Similarity=0.153 Sum_probs=28.5 Q ss_pred EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 2025899999999999999999999999972068898 Q gi|254780531|r 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447 (452) Q Consensus 411 ~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL 447 (452) -.+|+-+|+++|.+.++.+|+.++.+..--..-..++ T Consensus 77 N~Vdld~Em~~~aeN~l~Y~a~~~~l~~~~~~lk~AI 113 (116) T PRK12685 77 NTVELGKEQARYSQNAMDYQTSLTFLNMKISGLKSAI 113 (116) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 8537899999999999999999999999999999986 No 64 >PRK12691 flgG flagellar basal body rod protein FlgG; Reviewed Probab=79.01 E-value=3.7 Score=18.59 Aligned_cols=40 Identities=18% Similarity=0.212 Sum_probs=36.1 Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 0258999999999999999999999999720688987525 Q gi|254780531|r 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 412 D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) .+|+++||++|-..|=.+|+.+.|+.-+.+.-+...+|+| T Consensus 223 NVd~~~Em~~mI~~qRaye~n~k~i~t~De~~~~a~nllR 262 (262) T PRK12691 223 NVDVVKEITDLITAQRAYEMNSKVISAADEMLQTTSKNLR 262 (262) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 4659999999999999999999999999999999998668 No 65 >PRK07182 flgB flagellar basal body rod protein FlgB; Reviewed Probab=78.81 E-value=3.7 Score=18.55 Aligned_cols=37 Identities=14% Similarity=0.169 Sum_probs=27.3 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 2589999999999999999999999997206889875259 Q gi|254780531|r 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452 (452) Q Consensus 413 ~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~~ 452 (452) +|+-.|+++|.+.++.+||.++.|.-- -..+.+=+|| T Consensus 111 Vdld~E~a~fa~Nal~Yqasl~fl~~k---i~~l~~AI~G 147 (148) T PRK07182 111 VALNVEQAEFSKNALDYQTSLSFLNMK---LTGLKQAIEG 147 (148) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHCC T ss_conf 035999999999999999999999999---9999998748 No 66 >PRK06004 flgB flagellar basal body rod protein FlgB; Reviewed Probab=77.48 E-value=3.7 Score=18.53 Aligned_cols=29 Identities=14% Similarity=0.069 Sum_probs=24.3 Q ss_pred EECCHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 20258999999999999999999999999 Q gi|254780531|r 411 VDADMASESTRLSALQTQQQLAVQALSIV 439 (452) Q Consensus 411 ~D~D~A~e~t~l~~~q~~~Qaa~~~laqa 439 (452) -.+|+-+|+.+|.+.++.+|++++.|.-- T Consensus 87 N~Vdle~Em~~~aen~~~Y~~~~~~~~~~ 115 (126) T PRK06004 87 NAVNLEDEMLKVSDNQMDYAAATSLYQKS 115 (126) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 81469999999999999999999999999 No 67 >COG1815 FlgB Flagellar basal body protein [Cell motility and secretion] Probab=77.03 E-value=4.2 Score=18.23 Aligned_cols=37 Identities=22% Similarity=0.256 Sum_probs=27.4 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 2589999999999999999999999997206889875259 Q gi|254780531|r 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452 (452) Q Consensus 413 ~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~~ 452 (452) +|+..|+++|.+.++.+|+.++.+. ..-.++.+-+|| T Consensus 96 Vdld~E~~~~~kN~~~Yq~~~~~l~---~~~~~~~~vl~g 132 (133) T COG1815 96 VDLDREMTEFAKNQLMYQALLSFLK---SQIKMLNSVLKG 132 (133) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHCC T ss_conf 4389999999999999999999999---999999999717 No 68 >PRK06802 flgC flagellar basal body rod protein FlgC; Reviewed Probab=75.88 E-value=4.5 Score=18.04 Aligned_cols=47 Identities=19% Similarity=0.206 Sum_probs=35.8 Q ss_pred HHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 73062220258999999999999999999999999720688987525 Q gi|254780531|r 405 KGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 405 ~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) .+.-..-++|+.+||++|-..+=.+||-++++..+.+.-+.-|.|=| T Consensus 94 ~GyV~~PnVn~~~EMvdm~~AsRsYeANv~~~~~aK~m~~~aL~IGk 140 (141) T PRK06802 94 QGYVFYPDVNVVSEMADMMSASRSFETNVEVLNSVKSMQQSLLKLGE 140 (141) T ss_pred CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 98884689898999999999999999999999999999999998637 No 69 >PRK12620 flgB flagellar basal body rod protein FlgB; Provisional Probab=75.58 E-value=4.6 Score=17.99 Aligned_cols=34 Identities=12% Similarity=0.032 Sum_probs=26.5 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 2589999999999999999999999997206889 Q gi|254780531|r 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446 (452) Q Consensus 413 ~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~v 446 (452) +|+-+|+++|.+.++.+|+.++.|.---..-..+ T Consensus 95 Vd~d~Em~~~aeN~l~Y~a~~~~l~~ki~~l~~A 128 (132) T PRK12620 95 VDPDAERAAYGRAALEYRASLSFLESKVRSMLTA 128 (132) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 0669999999999999999999999999999998 No 70 >PRK12626 flgB flagellar basal body rod protein FlgB; Provisional Probab=75.07 E-value=4.7 Score=17.91 Aligned_cols=25 Identities=8% Similarity=0.247 Sum_probs=21.0 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 2589999999999999999999999 Q gi|254780531|r 413 ADMASESTRLSALQTQQQLAVQALS 437 (452) Q Consensus 413 ~D~A~e~t~l~~~q~~~Qaa~~~la 437 (452) +|+-.|+++|.+.++.+||+++.|. T Consensus 124 VDld~E~a~faeN~l~YqAsl~fl~ 148 (162) T PRK12626 124 VDLDTERVQFADNALHYETGMTVMT 148 (162) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 0469999999999999999999999 No 71 >PRK12628 flgC flagellar basal body rod protein FlgC; Provisional Probab=72.51 E-value=5.5 Score=17.53 Aligned_cols=42 Identities=14% Similarity=0.183 Sum_probs=30.0 Q ss_pred CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 622202589999999999999999999999997206889875 Q gi|254780531|r 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449 (452) Q Consensus 408 s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L 449 (452) -..-++|+.+||++|-..+-.+||-+.++..+.+.-+..|.| T Consensus 97 V~~pnVn~~~EMvdm~~AsRsYEANv~v~~~aK~M~~~aL~I 138 (140) T PRK12628 97 VYTSNINYVEEMANIISASRSYQMNIELLNTTKQLMQRTLQL 138 (140) T ss_pred EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 734898889999999999999999999999999999999861 No 72 >PRK12636 flgG flagellar basal body rod protein FlgG; Provisional Probab=67.38 E-value=7 Score=16.85 Aligned_cols=40 Identities=18% Similarity=0.246 Sum_probs=34.7 Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 0258999999999999999999999999720688987525 Q gi|254780531|r 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 412 D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) .+|+++||++|-..|=.+|+.+.++.-+.+.-+.+..|.| T Consensus 224 NVn~~~Emv~mI~~qRaye~n~K~i~~~De~~~~~~nl~R 263 (263) T PRK12636 224 NVDLSEEFTEMIVAQRGFQANTRIITTSDEILQELVNLKR 263 (263) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 4759999999999999999998899999999999997459 No 73 >PRK12627 flgB flagellar basal body rod protein FlgB; Provisional Probab=59.63 E-value=9.8 Score=15.98 Aligned_cols=30 Identities=13% Similarity=0.120 Sum_probs=21.4 Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 025899999999999999999999999972 Q gi|254780531|r 412 DADMASESTRLSALQTQQQLAVQALSIVNN 441 (452) Q Consensus 412 D~D~A~e~t~l~~~q~~~Qaa~~~laqan~ 441 (452) .+|+.+|+.++...++.+|++++.|..-.. T Consensus 90 ~V~le~Em~~~aen~~~Y~~~~~~~~~~~~ 119 (128) T PRK12627 90 SVSLEEEMLRSAEAKRQHDRALAIYKSSMS 119 (128) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 355999999999999999999999999999 No 74 >TIGR01395 FlgC flagellar basal-body rod protein FlgC; InterPro: IPR006299 These sequences represent FlgC, one of several components of bacterial flagella. FlgC is part of the basal body. ; GO: 0019861 flagellum. Probab=59.41 E-value=9.9 Score=15.95 Aligned_cols=41 Identities=15% Similarity=0.181 Sum_probs=35.0 Q ss_pred EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 20258999999999999999999999999720688987525 Q gi|254780531|r 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 411 ~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) =-+|.-+||.+|-..+=-+||=++++..+-+....-|.|+| T Consensus 107 PNVn~~~EMVdmi~A~RsYeANv~v~~~~K~m~~~tL~~~~ 147 (147) T TIGR01395 107 PNVNVVEEMVDMIEASRSYEANVQVFNTAKSMLLRTLEIGR 147 (147) T ss_pred CCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 85585432321120024788999999999999999999709 No 75 >PRK12693 flgG flagellar basal body rod protein FlgG; Provisional Probab=58.75 E-value=10 Score=15.88 Aligned_cols=39 Identities=13% Similarity=0.191 Sum_probs=33.0 Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 025899999999999999999999999972068898752 Q gi|254780531|r 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450 (452) Q Consensus 412 D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~ 450 (452) .+|+.+||++|-..|=.+|+.+.|+.-+.+.-+.+..|| T Consensus 223 NVd~~~Em~~mI~~qR~ye~n~K~i~t~De~l~~~~nll 261 (261) T PRK12693 223 NVNVVEELVNMITGQRAYEMNSKAISTADQMLQYVNQLL 261 (261) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 466999999999999999999789999999999998629 No 76 >PRK05682 flgE flagellar hook protein FlgE; Validated Probab=57.41 E-value=8.5 Score=16.34 Aligned_cols=38 Identities=13% Similarity=0.241 Sum_probs=29.5 Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 02589999999999999999999999997206889875 Q gi|254780531|r 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449 (452) Q Consensus 412 D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L 449 (452) -+|+++|+++|=..|=-+||...+..-+.+.-|-++.| T Consensus 376 NVDla~E~t~mI~~QRaYqANskvItTsDemLq~linl 413 (414) T PRK05682 376 NVDLTTELVDMIVAQRNYQANAKTIKTQDQLLQTLVNL 413 (414) T ss_pred CCCHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHC T ss_conf 17799999999999877467403456199999999725 No 77 >PRK12641 flgF flagellar basal body rod protein FlgF; Reviewed Probab=54.35 E-value=12 Score=15.44 Aligned_cols=40 Identities=10% Similarity=0.225 Sum_probs=33.5 Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 0258999999999999999999999999720688987525 Q gi|254780531|r 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 412 D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) -+|..+||++|-..|=.+|+.+.++.-+-+.-+.+=+||| T Consensus 210 NVd~~~EM~~lI~~qRaye~n~K~i~~~Dem~~~an~L~~ 249 (252) T PRK12641 210 NVNLEKNMIEMISNARQFEMQMKIISMCDQNTEYANQLLN 249 (252) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 4669999999999999999999999999999999998755 No 78 >PRK12640 flgF flagellar basal body rod protein FlgF; Reviewed Probab=53.37 E-value=12 Score=15.34 Aligned_cols=40 Identities=18% Similarity=0.304 Sum_probs=34.6 Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 0258999999999999999999999999720688987525 Q gi|254780531|r 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 412 D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) -+|+++||++|-..|=.+|+.+.++.-+.+.-+.+-+|.| T Consensus 205 NV~~~~Em~~mI~~qRaye~n~k~i~~~Dem~~~an~l~R 244 (246) T PRK12640 205 NVNAVEEMVSMIALARQFEMQVKMMKTADDNAQAANQLLR 244 (246) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 5679999999999999999999999989999999998742 No 79 >PRK12694 flgG flagellar basal body rod protein FlgG; Reviewed Probab=51.74 E-value=13 Score=15.18 Aligned_cols=38 Identities=11% Similarity=0.233 Sum_probs=28.7 Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 02589999999999999999999999997206889875 Q gi|254780531|r 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449 (452) Q Consensus 412 D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L 449 (452) .+|+.+||++|-..|=.+|+.+.|+.-+.+.-+.+++| T Consensus 223 NVd~~~Emv~mI~~qRaye~~~k~i~t~De~l~~~~ql 260 (260) T PRK12694 223 NVNVVEELVNMIQTQRAYEINSKAVTTSDQMLQRLTQM 260 (260) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 46399999999999999999988999999999998668 No 80 >COG1558 FlgC Flagellar basal body rod protein [Cell motility and secretion] Probab=51.32 E-value=13 Score=15.14 Aligned_cols=47 Identities=15% Similarity=0.220 Sum_probs=32.9 Q ss_pred HHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 73062220258999999999999999999999999720688987525 Q gi|254780531|r 405 KGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 405 ~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) +++=+.-.+|+-.||++|-..+=-+||=++++.++-+..+..|.|+| T Consensus 91 ~GYV~~PNVn~v~EM~dmisAsRsYeANv~v~~~~K~m~~~tL~i~~ 137 (137) T COG1558 91 KGYVKMPNVNVVIEMVDMISASRSYEANVEVLNTAKSMMQKTLELGQ 137 (137) T ss_pred CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 67556587658999999999999899999999999999999997519 No 81 >PRK06003 flgB flagellar basal body rod protein FlgB; Reviewed Probab=43.48 E-value=18 Score=14.39 Aligned_cols=37 Identities=11% Similarity=0.186 Sum_probs=26.1 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 2589999999999999999999999997206889875259 Q gi|254780531|r 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452 (452) Q Consensus 413 ~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~~ 452 (452) +|+-+|+.++.+.+..+|++++.+.. .-.++++=+|| T Consensus 90 V~le~Em~~~aen~~~Y~~~~~l~~~---~~~ml~~Ai~G 126 (126) T PRK06003 90 VSLEQEMMKAGEINRDYSLNTAIVKS---FHRMMLMTVKG 126 (126) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHCC T ss_conf 57999999999999999999999999---99999998649 No 82 >TIGR01146 ATPsyn_F1gamma ATP synthase F1, gamma subunit; InterPro: IPR000131 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (F-, V- and A-ATPases contain rotary motors) and in the type of ions they transport , . F-ATPases (F1F0-ATPases) in mitochondria, chloroplasts and bacterial plasma membranes are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases) are primarily found in eukaryotic vacuoles, catalysing ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases) are found in Archaea and function like F-ATPases. P-ATPases (E1E2-ATPases) are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. F-ATPases (also known as F1F0-ATPase, or H(+)-transporting two-sector ATPase) (3.6.3.14 from EC) are composed of two linked complexes: the F1 ATPase complex is the catalytic core and is composed of 5 subunits (alpha, beta, gamma, delta, epsilon), while the F0 ATPase complex is the membrane-embedded proton channel that is composed of at least 3 subunits (A-C), nine in mitochondria (A-G, F6, F8). Both the F1 and F0 complexes are rotary motors that are coupled back-to-back. In the F1 complex, the central gamma subunit forms the rotor inside the cylinder made of the alpha(3)beta(3) subunits, while in the F0 complex, the ring-shaped C subunits forms the rotor. The two rotors rotate in opposite directions, but the F0 rotor is usually stronger, using the force from the proton gradient to push the F1 rotor in reverse in order to drive ATP synthesis . These ATPases can also work in reverse to hydrolyse ATP to create a proton gradient. The ATPase F1 complex gamma subunit forms the central shaft that connects the F0 rotary motor to the F1 catalytic core. The gamma subunit functions as a rotary motor inside the cylinder formed by the alpha(3)beta(3) subunits in the F1 complex . The best-conserved region of the gamma subunit is its C-terminus, which seems to be essential for assembly and catalysis. More information about this protein can be found at Protein of the Month: ATP Synthases .; GO: 0046933 hydrogen ion transporting ATP synthase activity rotational mechanism, 0046961 hydrogen ion transporting ATPase activity rotational mechanism, 0015986 ATP synthesis coupled proton transport, 0016020 membrane, 0016469 proton-transporting two-sector ATPase complex. Probab=40.36 E-value=20 Score=14.09 Aligned_cols=49 Identities=12% Similarity=0.064 Sum_probs=43.2 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHH Q ss_conf 9999999878999999999999999999997306222025899999999 Q gi|254780531|r 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423 (452) Q Consensus 375 v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~ 423 (452) +-...++.+|||+-+++..+|-.++...|+-...|-+=+=+.+|.++-- T Consensus 276 ~Es~ASE~aARM~AMdnAtdNA~~li~~Ltl~YNraRQA~ITqEl~EIv 324 (330) T TIGR01146 276 LESAASEQAARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIV 324 (330) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999988885325889999879888888767776888888868899988 No 83 >PHA00369 H minor spike protein Probab=39.20 E-value=21 Score=13.98 Aligned_cols=61 Identities=13% Similarity=0.082 Sum_probs=45.2 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 8789999999999999999999973062220258999999999999999999999999720688 Q gi|254780531|r 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445 (452) Q Consensus 382 iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~ 445 (452) .-+|+|.-++....++.+.-|-++.++|+.-. -|-|.|++.|-...---+||.||.-.-|. T Consensus 177 aTSRqNTKDsVYAQNEML~ynQkES~aRV~sI---l~NT~Lt~qQ~t~EIMR~~LTqAQ~~GQh 237 (337) T PHA00369 177 ATSRENTKDSVYAQNEMLAYNQKESMSRVGSI---LENTSLTKQQQTSEIMRQMLTQAQTAGQH 237 (337) T ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH---HHCCCCCHHHHHHHHHHHHHHHHHHHHCC T ss_conf 11024540158877899988778889999999---84476107788999999999988763022 No 84 >pfam04687 Microvir_H Microvirus H protein (pilot protein). A single molecule of H protein is found on each of the 12 spikes on the microvirus shell. H is involved in the ejection of the phage DNA, and at least one copy is injected into the host's periplasmic space along with the ssDNA viral genome. Part of H is thought to lie outside the shell, where it recognizes lipopolysaccharide from virus-sensitive strains. Part of H may lie within the capsid, since mutations in H can influence the DNA ejection mechanism by affecting the DNA-protein interactions. H may span the capsid through the hydrophilic channels formed by G proteins. Probab=38.41 E-value=21 Score=13.91 Aligned_cols=60 Identities=13% Similarity=0.082 Sum_probs=44.8 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 878999999999999999999997306222025899999999999999999999999972068 Q gi|254780531|r 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444 (452) Q Consensus 382 iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~ 444 (452) +-+|+|.-+.....++.+.-|-++.++|+.-. -|-|+|++.|-...---+||.||.-.-| T Consensus 165 aTSRqNTKD~VYAQNEML~YnQkES~aRV~sI---leNT~LtkqQqt~EIMR~~LTqAQtaGQ 224 (310) T pfam04687 165 ATSRQNTKDSVYAQNEMLAYNQKESQARVASI---LENTDLTKQQQTSEIMRQMLTQAQTAGQ 224 (310) T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHCCCCHHHHHHHHHHHHHHHHHHHHHC T ss_conf 22124531368887899988778889999999---8447610778899999999998887520 No 85 >pfam10498 IFT57 Intra-flagellar transport protein 57. Eukaryotic cilia and flagella are specialized organelles found at the periphery of cells of diverse organisms. Intra-flagellar transport (IFT) is required for the assembly and maintenance of eukaryotic cilia and flagella, and consists of the bidirectional movement of large protein particles between the base and the distal tip of the organelle. IFT particles contain multiple copies of two distinct protein complexes, A and B, which contain at least 6 and 11 protein subunits. IFT57 is part of complex B but is not, however, required for the core subunits to stay associated. This protein is known as Huntington-interacting protein-1 in humans. Probab=37.56 E-value=22 Score=13.82 Aligned_cols=15 Identities=20% Similarity=0.202 Sum_probs=5.8 Q ss_pred HHHHHHHHHHHHHHH Q ss_conf 899999999999999 Q gi|254780531|r 415 MASESTRLSALQTQQ 429 (452) Q Consensus 415 ~A~e~t~l~~~q~~~ 429 (452) |.+..-+|++.+..+ T Consensus 271 yr~~~~~l~~~~~~y 285 (355) T pfam10498 271 YREARRTLSQVQEKY 285 (355) T ss_pred HHHHHHHHHHHHHHH T ss_conf 999999999999999 No 86 >PRK12816 flgG flagellar basal body rod protein FlgG; Reviewed Probab=37.41 E-value=22 Score=13.81 Aligned_cols=40 Identities=15% Similarity=0.191 Sum_probs=29.2 Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 0258999999999999999999999999720688987525 Q gi|254780531|r 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 412 D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) .+|+.+||++|-..|=.+|+.+.|+.-+.+.-+.+-.|-| T Consensus 225 NV~~~~EMv~mI~~qR~fe~~~K~i~t~De~~~~~~nl~R 264 (264) T PRK12816 225 NVSIVEEMVTMIVAQRAYEINSKAIQTSDNMLGTANNLKR 264 (264) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 3659999999999999999999999999999999986269 No 87 >PRK13424 F0F1 ATP synthase subunit gamma; Provisional Probab=35.78 E-value=24 Score=13.65 Aligned_cols=49 Identities=6% Similarity=-0.005 Sum_probs=44.0 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHH Q ss_conf 9999999878999999999999999999997306222025899999999 Q gi|254780531|r 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423 (452) Q Consensus 375 v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~ 423 (452) +....++.+|||..++...++..++...++....+.+=+-+.+|..+.- T Consensus 235 ~es~aSE~~aRm~AM~~At~Na~e~i~~L~l~yNr~RQa~IT~EL~EIv 283 (291) T PRK13424 235 LDTSASEHAARMAAMDNATRSCDDMIGSLTLLFNKTRQASITRDLMDIV 283 (291) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9989999999999999899979999999999999999998899999999 No 88 >PRK05841 flgE flagellar hook protein FlgE; Validated Probab=35.29 E-value=20 Score=14.12 Aligned_cols=40 Identities=15% Similarity=0.206 Sum_probs=32.7 Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 0258999999999999999999999999720688987525 Q gi|254780531|r 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 412 D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) .+|+++|.++|=..|=-+||-..+..-+.+.-|-++.|=| T Consensus 566 NVDLa~Eft~mIvtQR~yQANsKvITTsD~mLqelinLKR 605 (605) T PRK05841 566 NVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605 (605) T ss_pred HHHHHHHHHHHHHHHHHCHHHCEEEEEHHHHHHHHHHHCC T ss_conf 3058999999999876520541278768999999986259 No 89 >PRK06664 fliD flagellar hook-associated protein FliD; Validated Probab=35.00 E-value=24 Score=13.57 Aligned_cols=74 Identities=9% Similarity=-0.009 Sum_probs=40.1 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99999999999999987899999999999999999999730622202589999999999999999999999997206889 Q gi|254780531|r 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446 (452) Q Consensus 367 ~id~a~~~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~v 446 (452) .++..++.+...-+.|..|.+.|+..+..+..+...++.-+..+|+ +|.++=..++. +++|-|+...++ T Consensus 606 ~l~~~l~~~~~~~G~i~~~~~~l~~~i~~~~~~i~~~~~rl~~~e~--------ry~~QF~ame~---~~~~mnsqs~~L 674 (684) T PRK06664 606 MLLEYLKPYTQAGGIVYNKVKSLDEKIANNNKKVEEYEKKLESRER--------KLKGKFLTMDQ---TVKKNKKQGNYL 674 (684) T ss_pred HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHH---HHHHHHHHHHHH T ss_conf 9999999876568645306667999998999999999999999999--------99999999999---999999999999 Q ss_pred HHHHC Q ss_conf 87525 Q gi|254780531|r 447 LSLFR 451 (452) Q Consensus 447 L~L~~ 451 (452) =++++ T Consensus 675 ~~~~~ 679 (684) T PRK06664 675 KNFNK 679 (684) T ss_pred HHHHH T ss_conf 98753 No 90 >PRK12642 flgF flagellar basal body rod protein FlgF; Reviewed Probab=34.98 E-value=24 Score=13.57 Aligned_cols=39 Identities=13% Similarity=0.174 Sum_probs=28.0 Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 025899999999999999999999999972068898752 Q gi|254780531|r 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450 (452) Q Consensus 412 D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~ 450 (452) .+|+++||++|-..|=.+|+.+.++.-+-+.-+...+.| T Consensus 199 NVd~~~EM~~lI~~qRafe~~~k~i~~~D~~l~~ai~~l 237 (241) T PRK12642 199 NVNAMTEMTRLISVSRAFESVSSLMRDSESSVSEAIKTL 237 (241) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 062999999999999999999999999999999999987 No 91 >PRK13425 F0F1 ATP synthase subunit gamma; Provisional Probab=34.91 E-value=24 Score=13.57 Aligned_cols=49 Identities=10% Similarity=0.099 Sum_probs=43.9 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHH Q ss_conf 9999999878999999999999999999997306222025899999999 Q gi|254780531|r 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423 (452) Q Consensus 375 v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~ 423 (452) +....++.+|||..++...++..++...++....+.+=+-+..|.++.- T Consensus 235 ~es~aSE~aaRm~AM~~At~Na~eli~~L~l~yNr~RQa~IT~EL~EIv 283 (291) T PRK13425 235 LESNAAEQAARMTAMDSATENAKELLRTLNISYNRARQAAITKELSEIV 283 (291) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999999999979999999999999998998899999999 No 92 >pfam00231 ATP-synt ATP synthase. Probab=32.38 E-value=27 Score=13.31 Aligned_cols=49 Identities=12% Similarity=0.065 Sum_probs=43.9 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHH Q ss_conf 9999999878999999999999999999997306222025899999999 Q gi|254780531|r 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423 (452) Q Consensus 375 v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~ 423 (452) +....++.+|||..++...++..++...++....+.+=+-+.+|+.+.- T Consensus 234 ~es~asE~~aR~~AM~~At~Na~e~i~~L~~~yNr~RQ~~IT~El~EIv 282 (288) T pfam00231 234 LESLASEHAARMTAMDNATDNAKELIKKLTLQYNRARQAAITQELIEIV 282 (288) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9989989999999999999979999999999999999999999999999 No 93 >PRK12637 flgE flagellar hook protein FlgE; Provisional Probab=32.30 E-value=20 Score=14.04 Aligned_cols=38 Identities=16% Similarity=0.253 Sum_probs=28.2 Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 02589999999999999999999999997206889875 Q gi|254780531|r 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449 (452) Q Consensus 412 D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L 449 (452) .+|+++|.++|=-.|=-+||...+..-+++.-|-++.| T Consensus 435 NVDLa~Eft~mIvtQR~yQANSKvItTsDemLqelinL 472 (473) T PRK12637 435 NVDMSRELVNMIVAQRTYQANAQTIKTQDEVMQVLMNM 472 (473) T ss_pred HHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHC T ss_conf 40799999999998765014325887589999999705 No 94 >pfam08898 DUF1843 Domain of unknown function (DUF1843). This domain is found at the C-terminus of a family of proteins that are functionally uncharacterized. The presumed domain is about 60 amino acid residues in length and is found independently in some proteins. Probab=31.81 E-value=27 Score=13.25 Aligned_cols=39 Identities=8% Similarity=0.243 Sum_probs=26.4 Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH Q ss_conf 999999999987530377630356788999999999998 Q gi|254780531|r 84 AIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122 (452) Q Consensus 84 ~~~~l~r~relavqa~n~~~dr~a~~~e~~~l~~~i~~i 122 (452) ++.-|.+||.|+-++-.-=.++..|...+..|+.+|-++ T Consensus 12 asGDLa~MK~L~~qa~qqL~~~~~l~~Al~~L~~EIarl 50 (53) T pfam08898 12 ASGDLAQMKALLAQAEQQLAQAGELAAALEKLKAEIARL 50 (53) T ss_pred HCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH T ss_conf 738599999999999998822057999999999999986 No 95 >PRK13422 F0F1 ATP synthase subunit gamma; Provisional Probab=30.39 E-value=29 Score=13.11 Aligned_cols=49 Identities=12% Similarity=0.066 Sum_probs=43.5 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHH Q ss_conf 9999999878999999999999999999997306222025899999999 Q gi|254780531|r 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423 (452) Q Consensus 375 v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~ 423 (452) +....++.+|||..++...++-.++...++-...+.+=+-+..|.++.- T Consensus 244 les~aSE~aaRm~AM~~AT~NA~emi~~Ltl~yNr~RQa~IT~El~EIv 292 (298) T PRK13422 244 LENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEIC 292 (298) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999999899839999999999999999998899999998 No 96 >TIGR03323 alt_F1F0_F1_gam alternate F1F0 ATPase, F1 subunit gamma. A small number of taxonomically diverse prokaryotic species, including Methanosarcina barkeri, have what appears to be a second ATP synthase, in addition to the normal F1F0 ATPase in bacteria and A1A0 ATPase in archaea. These enzymes use ion gradients to synthesize ATP, and in principle may run in either direction. This model represents the F1 gamma subunit of this apparent second ATP synthase. Probab=28.17 E-value=32 Score=12.87 Aligned_cols=49 Identities=18% Similarity=0.171 Sum_probs=42.7 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHH Q ss_conf 9999999878999999999999999999997306222025899999999 Q gi|254780531|r 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423 (452) Q Consensus 375 v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~ 423 (452) +....++.+|||..++...++..++...|+-...+.+=+=+.+|.++.- T Consensus 231 leS~aSE~aaRm~AM~~At~NA~eli~~Ltl~yNr~RQa~IT~El~EIv 279 (285) T TIGR03323 231 AESLASENASRLAAMQRAEKNIDELLDDLNRRFHRLRQSAIDEELFDVV 279 (285) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9988889999999999999969999999999999999998899999998 No 97 >COG0224 AtpG F0F1-type ATP synthase, gamma subunit [Energy production and conversion] Probab=26.00 E-value=35 Score=12.63 Aligned_cols=49 Identities=8% Similarity=0.008 Sum_probs=43.2 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHH Q ss_conf 9999999878999999999999999999997306222025899999999 Q gi|254780531|r 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423 (452) Q Consensus 375 v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~ 423 (452) +....++.+|||+.++...++..++...++-...+.+=+=+.+|.++.- T Consensus 232 les~asE~aaRm~AM~~ATdNA~~lI~~l~l~yNk~RQa~ITqEL~EIV 280 (287) T COG0224 232 LESKASEHAARMTAMKNATDNAGDLIKELTLVYNKARQAAITQELIEIV 280 (287) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999998999999998729999999999977999998899999999 No 98 >PRK13874 conjugal transfer protein TrbJ; Provisional Probab=25.60 E-value=35 Score=12.59 Aligned_cols=52 Identities=10% Similarity=0.135 Sum_probs=28.6 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH Q ss_conf 9999999999999999999999999998753037763035678899999999 Q gi|254780531|r 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQ 118 (452) Q Consensus 67 ~~~a~~~l~~ae~~l~~~~~~l~r~relavqa~n~~~dr~a~~~e~~~l~~~ 118 (452) ++++.+...+-.+.+..+...|.++..|.-++-.=.++...+..+++.++-+ T Consensus 66 ~NqarNl~~Lp~s~~~~l~~~l~~~~~ll~qaq~Iay~v~~id~~f~~~yp~ 117 (233) T PRK13874 66 INQARNLASLPYSSLQQLQQSLARTQQLLGQAQGIAYDVQSIDQAFQQTYPE 117 (233) T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH T ss_conf 9999987258856999999999999999999885767899799899771800 No 99 >PRK08425 flgE flagellar hook protein FlgE; Validated Probab=24.52 E-value=37 Score=12.46 Aligned_cols=40 Identities=18% Similarity=0.249 Sum_probs=31.2 Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 0258999999999999999999999999720688987525 Q gi|254780531|r 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 412 D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) -+|+++|.++|=-.|--+||--.+..-+.+.-|-++.|=| T Consensus 677 NVDLs~Eft~mI~tQRgyQANsKvITTsDemLqelinLKR 716 (716) T PRK08425 677 NVDLSRSLTQLIVVQRGFQANSKTITTSDQMLNTLLQLKQ 716 (716) T ss_pred HHHHHHHHHHHHHHHHHCHHHCCEEEEHHHHHHHHHHHCC T ss_conf 2159999999999766420304378618999999986469 No 100 >COG1749 FlgE Flagellar hook protein FlgE [Cell motility and secretion] Probab=24.34 E-value=30 Score=13.03 Aligned_cols=40 Identities=23% Similarity=0.283 Sum_probs=29.3 Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 0258999999999999999999999999720688987525 Q gi|254780531|r 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451 (452) Q Consensus 412 D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~L~~ 451 (452) -+|+++|-++|=-.|=-+||-...+.-..+.-|-+++|-| T Consensus 384 NVDls~EltnmIvaQR~YqANsK~i~T~D~mlq~lvnLkr 423 (423) T COG1749 384 NVDLAKELTNLIVAQRGYQANAKVITTSDQMLQTLVNLKR 423 (423) T ss_pred CCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCC T ss_conf 2118999999888665044455068605899999986229 No 101 >PRK08032 fliD flagellar capping protein; Reviewed Probab=23.13 E-value=39 Score=12.30 Aligned_cols=74 Identities=19% Similarity=0.240 Sum_probs=37.9 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99999999999999998789999999999999999999973062220258999999999999999999999999720688 Q gi|254780531|r 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445 (452) Q Consensus 366 ~~id~a~~~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~ 445 (452) ..++..++.....-+-|..+...++.++..+.+....++.-+.++|+ +|.++=+.++ .+++|.|+...+ T Consensus 389 ~~~~~~l~~~~~~~G~i~~~~~~l~~~i~~l~~~i~~l~~rl~~~e~--------~~~~QFtame---~~~~~mnsq~s~ 457 (463) T PRK08032 389 TQIATNLKSWLSTTGIIKAATDGVNKTLKKLTKQYNAVSDSIDATVA--------RYKAQFTQLD---KMMTSLNSTSSY 457 (463) T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHH---HHHHHHHHHHHH T ss_conf 99999999875789720157667999999999999999999999999--------9999999999---999999989999 Q ss_pred HHHHH Q ss_conf 98752 Q gi|254780531|r 446 ILSLF 450 (452) Q Consensus 446 vL~L~ 450 (452) +-+.| T Consensus 458 L~qq~ 462 (463) T PRK08032 458 LTQQF 462 (463) T ss_pred HHHHH T ss_conf 99841 No 102 >PRK13423 F0F1 ATP synthase subunit gamma; Provisional Probab=21.15 E-value=43 Score=12.05 Aligned_cols=49 Identities=12% Similarity=0.085 Sum_probs=43.7 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHH Q ss_conf 9999999878999999999999999999997306222025899999999 Q gi|254780531|r 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423 (452) Q Consensus 375 v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~ 423 (452) +....++-+|||..++...++..++...++....+.+=+-+.+|+.+.- T Consensus 231 les~aSE~aaRm~AM~~At~Na~eli~~L~~~yNr~RQa~IT~El~EIv 279 (286) T PRK13423 231 LESVASEHGARMTAMDSASKNATEMIGKLTLQYNRARQAAITTELMEII 279 (286) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999999899859999999999999999999999999999 No 103 >PRK05621 F0F1 ATP synthase subunit gamma; Validated Probab=20.94 E-value=43 Score=12.02 Aligned_cols=49 Identities=14% Similarity=0.064 Sum_probs=42.4 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHH Q ss_conf 9999999878999999999999999999997306222025899999999 Q gi|254780531|r 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423 (452) Q Consensus 375 v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~ 423 (452) +....++.+|||..++...++.+++...++....+.+=+=+.+|..+.- T Consensus 233 les~aSE~aaRm~AM~~At~Na~eli~~L~~~yNr~RQ~~IT~El~EIv 281 (287) T PRK05621 233 LENKASEQAARMTAMKNATDNAKDLIKKLTLVYNRARQAAITQEITEIV 281 (287) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999999999989999999999998999999999999999 No 104 >PRK13426 F0F1 ATP synthase subunit gamma; Provisional Probab=20.87 E-value=44 Score=12.01 Aligned_cols=49 Identities=8% Similarity=0.100 Sum_probs=42.1 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHH Q ss_conf 9999999878999999999999999999997306222025899999999 Q gi|254780531|r 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423 (452) Q Consensus 375 v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~ 423 (452) +....++.+|||..++...++..++...++....+.+=+-+.+|+.+.- T Consensus 236 les~asE~aaRm~AM~~At~Na~e~i~~Ltl~yNr~RQa~IT~El~EIv 284 (289) T PRK13426 236 LDSNASEHAARTLAMQIATDNANELIQELTKQYNKTRQQAITNELLDIV 284 (289) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999999999959999999999999999999899999997 No 105 >PRK06803 flgE flagellar hook protein FlgE; Validated Probab=20.49 E-value=44 Score=11.97 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=26.8 Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 0258999999999999999999999999720688987 Q gi|254780531|r 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448 (452) Q Consensus 412 D~D~A~e~t~l~~~q~~~Qaa~~~laqan~~~~~vL~ 448 (452) -+|+++|.++|=..|=-+||...+..-+.+.-|-++- T Consensus 360 NVDla~Eft~mI~tQR~yqANskvItT~DemlqelvN 396 (398) T PRK06803 360 NVDITAELVGLMTAQRNYQANAKVISTNDTMQQALFN 396 (398) T ss_pred HCHHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHH T ss_conf 1409999999999987635642488748999999974 No 106 >PRK13427 F0F1 ATP synthase subunit gamma; Provisional Probab=20.38 E-value=45 Score=11.95 Aligned_cols=49 Identities=14% Similarity=0.144 Sum_probs=41.9 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHH Q ss_conf 9999999878999999999999999999997306222025899999999 Q gi|254780531|r 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423 (452) Q Consensus 375 v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~D~D~A~e~t~l~ 423 (452) +....++-+|||..++...++..++...++-...+.+=+=+.+|..+.- T Consensus 231 les~aSE~~aRm~AM~~At~Na~e~i~~L~l~yNr~RQa~IT~El~EIV 279 (286) T PRK13427 231 LEANCSEQIARRIAMKSATDAASEMIKLLTRGYNRVRQAKITQEISEIV 279 (286) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9989999999999999999869999999999999999998899999998 No 107 >TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase; InterPro: IPR014265 Proteins in this entry are putative periplasmic sensor signal transduction histidine kinases. They all contain a GAF domain that is present in phytochromes and cGMP-specific phosphodiesterases, and which has been experimentally proven to be involved in protein:protein interactions. They also contain a C-terminal histidine kinase domain, which is composed of a dimerisation sub-domain and an ATP/ADP-binding phosphotransfer, or catalytic, sub-domain. The proteins in this entry are found strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria, where members of IPR014264 from INTERPRO and IPR014266 from INTERPRO also occur.. Probab=20.21 E-value=45 Score=11.93 Aligned_cols=77 Identities=10% Similarity=0.117 Sum_probs=62.0 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHH Q ss_conf 99999999999999999989999999999999999999999999998753037763-035678899999999999863 Q gi|254780531|r 48 SIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT-DSKSIQSEITQLQSQLRDIAR 124 (452) Q Consensus 48 ~~~~~l~~~~~~~~q~~~n~~~a~~~l~~ae~~l~~~~~~l~r~relavqa~n~~~-dr~a~~~e~~~l~~~i~~ian 124 (452) .++=-||.=+..+.=-.+|+..=+..=.=.|-.|+.|.+-.+|||.+.-|--+... +.+...-++.+|.+++..-.+ T Consensus 492 FvVHDLKNLvaQLSL~l~NA~~Hk~NPeFq~DmL~Tv~~~v~RM~~ll~qLr~~~~p~~~~~~~~l~~L~~~~~~~k~ 569 (696) T TIGR02916 492 FVVHDLKNLVAQLSLLLRNAERHKDNPEFQDDMLETVESAVNRMKKLLAQLREKGLPEEEKKTVDLVDLLRRVIASKR 569 (696) T ss_pred EEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEHHHHHHHHHHHHHH T ss_conf 211025899999999999887417896689999998999999999999997306897405641038999999999986 Done!