HHsearch alignment of GI: 254780531 and MMDB domain: 2zbi_A_1-113_232-292
>2zbi_A (A:1-113,A:232-292) Flagellin homolog; flagellum, structural protein; 2.00A {Sphingomonas SP}
Probab=99.97 E-value=4.3e-30 Score=201.17 Aligned_cols=167 Identities=16% Similarity=0.230 Sum_probs=138.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999998999999999999999999999999999875303776---30356788999999999998630012110
Q gi|254780531|r 55 SDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGE 131 (452)
Q Consensus 55 ~~~~~~~q~~~n~~~a~~~l~~ae~~l~~~~~~l~r~relavqa~n~~---~dr~a~~~e~~~l~~~i~~ian~t~~nG~ 131 (452)
+++.+++||.+|++++++||+++|++|+++.++|+|||||+||++|++ .||.+|+.|+++|+++|.+|+|+|+|||+
T Consensus 2 sqi~~l~q~~rN~~da~s~lqtAe~aL~~i~~iLqrireLavQAaNgt~s~~Dr~ai~~Ei~qL~~eI~~ian~T~fnG~ 81 (174)
T 2zbi_A 2 AQIKGLTQAQRNANDGISLAQTAEGALGEISNNLQRIRELAVQASNGTNTQTDRDALQAEVTQLQSEIQRVAEQTSFNGQ 81 (174)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHCEETTE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 05666999998799999999999999999999999999999987257999999999999999999999999985223276
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 01356665432233433222111233333222222222135433333221111111112233322345443322211112
Q gi|254780531|r 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211 (452)
Q Consensus 132 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (452)
|||+|+.....|+.+..........
T Consensus 82 ~Lf~Gs~~~~~~~~~~~~~~~~~~~------------------------------------------------------- 106 (174)
T 2zbi_A 82 KLLDGSFNGVQFQIGANAGETIGVS------------------------------------------------------- 106 (174)
T ss_dssp ESSBSCCCEEEEECSSSTTCEEEEE-------------------------------------------------------
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHH-------------------------------------------------------
T ss_conf 6443321000111000000233221-------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC
Q ss_conf 22211222222222111111111111010011222101233334433222223322222100000122344443211001
Q gi|254780531|r 212 DASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291 (452)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (452)
T Consensus 107 -------------------------------------------------------------------------------- 106 (174)
T 2zbi_A 107 -------------------------------------------------------------------------------- 106 (174)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 23321110000000011111111223444433223222333222221000001223344432100000057899999999
Q gi|254780531|r 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371 (452)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~id~a 371 (452)
..........+..++..+|..||.|
T Consensus 107 -------------------------------------------------------~~~~~~~~v~t~~~a~~ai~~id~a 131 (174)
T 2zbi_A 107 -------------------------------------------------------KIXNAQTTVSSFTNAQQTITQIDNA 131 (174)
T ss_dssp -------------------------------------------------------CCCBCSTCCSSHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------------HCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf -------------------------------------------------------0134222301177799999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
Q ss_conf 9999999999878999999999999999999997306222
Q gi|254780531|r 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411 (452)
Q Consensus 372 ~~~v~~~ra~iGa~~nrle~~~~~~~~~~~~~~~~~s~i~ 411 (452)
+..|...|+.|||.|||||++++++....+|+++++|...
T Consensus 132 i~~v~~~r~~lGa~qnrl~~t~~nl~~~~~n~~aa~S~~~ 171 (174)
T 2zbi_A 132 LKDINTARADLGAVQNRFTSTVANLQSXTENLSSALEHHH 171 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC-----------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999998757999999999999999999999986300