PSIBLAST alignment of GI: 254780531 and protein with PDB id: 1ucu
>gi|34810684|pdb|1UCU|A Chain A, R-Type Straight Flagellar Filament Made Of Full-Length Flagellin Length = 494
Score = 214 bits (543), Expect = 3e-53, Method: Composition-based stats.
Identities = 68/492 (13%), Positives = 131/492 (26%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 123 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + + G + + +
Sbjct: 183 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + + A T +T
Sbjct: 243 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVKNVQVANADLTEAKAALTAAGVTG 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY---- 355
+ D + D S+ T T T
Sbjct: 303 TASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNK 362
Query: 356 ------------------------------------NEKLAMEEMVSFIDTQIKCATAAA 379
E + ID +
Sbjct: 363 LGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLR 422
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 423 SDLGAVQNRFNSAITNLGNTVNNLTSVRSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 482
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 483 NQVPQNVLSLLR 494