BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780531|ref|YP_003064944.1| flagellin domain-containing
protein [Candidatus Liberibacter asiaticus str. psy62]
(452 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|15614040|ref|NP_242343.1| flagellin [Bacillus halodurans C-125]
gi|10174094|dbj|BAB05196.1| flagellin [Bacillus halodurans C-125]
Length = 464
Score = 244 bits (621), Expect = 3e-62, Method: Composition-based stats.
Identities = 67/462 (14%), Positives = 144/462 (31%), Gaps = 14/462 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++A + L + +++SSGLR++ AAD+AA +I++ M+S L
Sbjct: 3 INNNIQALNAYRNLYQNQFQTSKNLEKLSSGLRINRAADDAAGLAISEKMRSQIRGLKMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S + ++ M + ++ ++ D + IQ EI QL+ ++
Sbjct: 63 ERNAMDGISLMQTSEGAMQEVHAMLQRMRELAVQAANDTNTEYDREQIQKEIDQLKLEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI-----TTIDYYLDPETV 175
I+ + FN L T A + + + +
Sbjct: 123 SISEKTEFNTRKLLNGFSAVLTTFDAGANEVNLEGFPRVTDANLKSGEYRLIVENVSYSS 182
Query: 176 LLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
+ + G + + + V+ + + + K+ L
Sbjct: 183 NVTQPSAGLKDGDISFADAIGSVDEENKMKLGEYSILVREVVPNGDAKIEILDPDGLSVG 242
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
T ++ + V A T R + ++
Sbjct: 243 TKVVGIGTNGTTNETVAGIQIDTTKISTSGTVKIKLEVEADLTLQRSTDGTFEPIQASRT 302
Query: 296 SITSDPGYTNSTVAKVGNTHYY------VDTESTTLDSRKDLPKEIDSGYSMVTLNITRH 349
+++ + + V + T + + +T
Sbjct: 303 LTSNNGMFRHGGVEYNFYNNIEEGNLEFTITNNALSFQIGPNTNQNVMIDIPKMDVVTLG 362
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
+ + + ID I + A K+G++ +R+ + +++ + + R
Sbjct: 363 IEEVSVLTNADANKAIFQIDQAINKLSDARAKLGAVQNRLEHTVNNLQVTHENLTASESR 422
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ DADMA T + Q A L+ N +L L +
Sbjct: 423 IRDADMALLMTEFTRNNILNQSATAMLAQANQLPQGVLQLLQ 464
>gi|288555872|ref|YP_003427807.1| flagellin [Bacillus pseudofirmus OF4]
gi|288547032|gb|ADC50915.1| flagellin [Bacillus pseudofirmus OF4]
Length = 466
Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats.
Identities = 65/464 (14%), Positives = 137/464 (29%), Gaps = 16/464 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++A + L + +++SSGLR++ AAD+AA +I++ M+S L
Sbjct: 3 INNNVQALNAYRNLYQNQFQTSKNLEKLSSGLRINRAADDAAGLAISEKMRSQIRGLKMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S + ++ M + ++ ++ D + IQ EI QL+ ++
Sbjct: 63 ERNAMDGISLMQTSEGAMQEVHTMLQRMRELAVQAANDTNTEYDREQIQKEIDQLKLEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIG-------------SFIRDDNGKVQITTID 167
I+ + FN L T + G
Sbjct: 123 SISEKTEFNTRKLLNGFSAVLTTYENNANDINLVGFPKVTNANLPSGDYQVGISGAEYKY 182
Query: 168 YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+ L + + + + +V+ + + +
Sbjct: 183 TFTQKSAGLGSDEANDVTFTKDIGEEPAMPFGEYTIMVREVNTDNNDAKVEILDPNGLSL 242
Query: 228 SGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
+K + + I I + A S + + + +
Sbjct: 243 GSKVVKIGSDASTTGEDIFGISINASKISTAGTVKVKMEAEASVVLKDNNSTPAVDIQAE 302
Query: 288 WVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT 347
+ +T + T + + +T
Sbjct: 303 RKLVSNNGLFKHGGIEYQFNTNITDDTLDFNITNNALSFQIGPNTNQNVMIDIPRMDIVT 362
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
+ +D I + A K+G++ +R+ + +++ + +
Sbjct: 363 LGIENIDVLSNAGANSAIFQLDQAINKLSDARAKLGAVQNRMEHTINNLQVTHENLTASE 422
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ DADMA E T + Q A L+ N +L L +
Sbjct: 423 SRIRDADMALEMTEFTRNNILNQSATAMLAQANQLPQGVLQLLQ 466
>gi|167628838|ref|YP_001679337.1| flagellin protein [Heliobacterium modesticaldum Ice1]
gi|167591578|gb|ABZ83326.1| flagellin protein [Heliobacterium modesticaldum Ice1]
Length = 432
Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats.
Identities = 69/451 (15%), Positives = 147/451 (32%), Gaps = 24/451 (5%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++A ++L + + +++SSGLR++ A+D+AA +I++ M+S L+
Sbjct: 3 INHNIQALNAYRQLNNNQGIVSKHMEKLSSGLRINRASDDAAGLAISERMRSQIRGLTVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + A+A + ++ ++ D ++Q E+ +L ++
Sbjct: 63 ERNGLDGVSLIQTAEAALDSVHQMLQRMRELAVQSANGIYTEQDRSALQDEVDELIKEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + FN L ++G + + ++ + + G + L D +
Sbjct: 123 RVAGHTEFNTRKLLNGNMGKAVSGAVANIQTNNLVTSGG-----KVFSGAAKLVNLSDRA 177
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ V ++L+ + + + S + +G+ + F
Sbjct: 178 GNKFGVVSGDTVQLSFVVNGKLLQTSGIKISGGTTFNSVIGAAVKDINGSSAGNVSGYFK 237
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + A T + +S R + D
Sbjct: 238 LTVSGTKLHFTAVSGGYAKAVYGITFTFRDAQGIMKTPATDALSSFHETRQALVSRPPGD 297
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
D S L + E N +
Sbjct: 298 ATLQIGPNTNQHLGLEIGDVTSAALGLKSYSGAEF----------------NIKINTQQD 341
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ D I + K+G+ +R+ + +K+ +++ R+ D DMA E T
Sbjct: 342 ANIAIKVFDEAIAKVSKERSKLGAFQNRLEYTINNLKVANESLTAAESRIRDTDMAMEMT 401
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + Q A L+ N IL L +
Sbjct: 402 QFTKQNIISQSATAMLAQANQLPQGILQLLK 432
>gi|121997309|ref|YP_001002096.1| flagellin domain-containing protein [Halorhodospira halophila SL1]
gi|121588714|gb|ABM61294.1| flagellin domain protein [Halorhodospira halophila SL1]
Length = 469
Score = 239 bits (608), Expect = 8e-61, Method: Composition-based stats.
Identities = 67/466 (14%), Positives = 156/466 (33%), Gaps = 17/466 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++++ + L + +R+SSG R++ AAD+AA +I++ S G ++
Sbjct: 4 VINTNIASLTGQRHLSSSQAEQQQALERLSSGQRINSAADDAAGLAISERFTSQIGGMNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S A+ M + +++ ++ D +++++E+ Q ++
Sbjct: 64 AERNANDGISYAQTAEGAMEEMGNLLQRVRELAVQSANDTNTAEDRQALEAEVQQAVQEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FN +N L L + + S + + V
Sbjct: 124 DRIASSTQFNNQNILDGSLDELVFQVGANRAQSINTGGVDVRGHNLGAEIGEGQAVQRAL 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+G LD + I + + + T A A
Sbjct: 184 DENGDYGDLDLDGSININGLDVDVSGSRSVSDAMDAINAQSRATGVTAFRADRATTEAFD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G +++ + + G + + + + D VR +++
Sbjct: 244 FNNDGGSSLEINGTTVSVGEDAGVGEFVDEVNAASGNTGVRAEMVGDDQVRFVSESDFRI 303
Query: 300 DPGYT--------------NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
+PG V + D+ + ++ +
Sbjct: 304 EPGDNSPIGDLGLEAEESGMRFERGVQLSTDLGQRLDVNGDADTLAALGMSDEQMDMSRH 363
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ + + ++ + +D + A +G++ +R ++ + + +E
Sbjct: 364 RVSGPDALSVATRTDADDAIRTVDFALGQINDARADLGAVQNRFEATTSNLQNVSENMEA 423
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R++DAD A+E+ ++ Q QQ L+ N + +L+L +
Sbjct: 424 SRSRILDADFAAETAAMTRAQVLQQAGTSVLAQANEAPQNVLTLLQ 469
>gi|297584526|ref|YP_003700306.1| flagellin domain-containing protein [Bacillus selenitireducens
MLS10]
gi|297142983|gb|ADH99740.1| flagellin domain protein [Bacillus selenitireducens MLS10]
Length = 486
Score = 239 bits (608), Expect = 1e-60, Method: Composition-based stats.
Identities = 64/484 (13%), Positives = 129/484 (26%), Gaps = 36/484 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++A + L N +++SSGLR++ AAD+AA +I++ M+S L
Sbjct: 3 INNNIQALNAYRNLYQNQMNTSKNLEKLSSGLRINRAADDAAGLAISEKMRSQIRGLKMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S + ++ M + ++ ++ D IQ EI QL+ ++
Sbjct: 63 ERNALDGISLMQTSEGAMQEVHTMLQRMRELAVQAANDTNTDNDRDQIQKEIDQLKLEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN L T+ + + + + + +
Sbjct: 123 SISEKTEFNTRKLLDGSSAVLTSFPDAFAPETNMTNFPKVLDANLETSDYRLQIDGVQGD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI----------------------- 217
T I + T+
Sbjct: 183 IYTTNVTQTAAGISNESQIFMSSDAIGENRKFGEYTVLVREFQGDNARIEILDPDGLSIA 242
Query: 218 ----------STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
+ ++ + I T
Sbjct: 243 NEVIEVGAGAEFDNESVDSSDSGTWPTVGGIQFDSSRITGNGTIKVELEFEAAFTLQQRE 302
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
+ T + + T +
Sbjct: 303 QDDGVSEFRTVRATETLTSKNGVIRHGGVEYQFDSSVLVTDTDDEDGEEFRITNNALAFQ 362
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+ +T + + A + +D I A K+G++ +
Sbjct: 363 IGPNTNQDVMIDIPRMDVVTLGIPDISVLDNAAANNAIFELDKAIDLLNDARSKLGAVQN 422
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
R+ + +++ + + R+ DADMA E T + Q A L+ N +L
Sbjct: 423 RMEHTINNLQVTHENLTSAESRIRDADMAEEMTEFTKNNILNQSATAMLAQANQLPQGVL 482
Query: 448 SLFR 451
L +
Sbjct: 483 QLLQ 486
>gi|218187851|gb|EEC70278.1| hypothetical protein OsI_01098 [Oryza sativa Indica Group]
Length = 779
Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats.
Identities = 75/450 (16%), Positives = 146/450 (32%), Gaps = 16/450 (3%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I TN S+++A + L +L R+SSGLR++ A D+AA +I++ S ++
Sbjct: 3 STINTNISSLTAQRNLSLSQSSLNTSIQRLSSGLRINSAKDDAAGLAISERFTSQIRGMN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S +A++ ++ A +++ ++ D K+IQ+E+ QL S+
Sbjct: 63 QAARNANDGISLSQVAESALAGAGNILQRVRELSVQSANATNSAGDRKAIQAEVGQLLSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA + FNG+ L GS+T + S G+ + +
Sbjct: 123 LDRIAGTTEFNGQKLLDGSFGSATFQLTASASGAATTGASAGSAGAAAGTVVIAGLQTKT 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + + + + +V + + + +
Sbjct: 183 VNVAASGTAADIASAVNAVADSTGVTASARNVSELKFSGTGSFSLAVKGENSTASNVTFN 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV-------------AASATYIRMGNS 285
A + + A + T T+ S + A+ G +
Sbjct: 243 VTANSSAAGLAEAVKAFNDVSSQTGITAKLNSDNTGLILTNESGKDINIANGASSAAGIT 302
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
AT S T + E + + T +
Sbjct: 303 LASQDATQTLSTGDLTFTTATAAGTGTTVASRGTVEYNSDKGYTVSGTGDTMTTTTATTS 362
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ +T + + ID + G++ SR + + +
Sbjct: 363 SMKSVSTIDVSTVDGSTRALKIIDAALSAVNGQRASFGALQSRFETAIANLNTSSENMSA 422
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQA 435
R+ DAD ASE+ LS Q QQ
Sbjct: 423 SRSRIQDADFASETANLSRAQILQQAGTAM 452
>gi|114319859|ref|YP_741542.1| flagellin domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226253|gb|ABI56052.1| flagellin domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 488
Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats.
Identities = 68/485 (14%), Positives = 147/485 (30%), Gaps = 36/485 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++++A + L L V +R+SSGLR++ A D+AA +I+ S L
Sbjct: 4 VINTNIASLNAQRNLNASQGQLGVALERLSSGLRINSAKDDAAGLAISSRFTSQINGLDQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S A+ + ++ +++ I+ +D ++ E+ Q ++
Sbjct: 64 AVRNANDGISFAQTAEGALDESTNLLQRIRELAVQASNDTNSASDRDALDQEVQQAIREI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FN +N L L + + D + D V ++
Sbjct: 124 SRIAASTQFNNQNILDGSLSDLIFQVGANRGQIISVDGVDARAQSLGAQVADSGAVATNT 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++G E E ++ + + + + + +
Sbjct: 184 LSEGGELSIAGVTIDMDGAENISDVISRINDNFSETGVQAFQTSGGSIVAETGLSEDEIS 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + + +G ++ + +A G S + V +
Sbjct: 244 FTADPDPVQLMTINGVNVFSEAGAGIDNPQALAERINAYTPLTGVSAVDVDGELVLESQA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS------------------- 340
D T +
Sbjct: 304 DQESIRVTDVNADLFEATTTDFGEETVFFDENDDLRTELTFERGFDLRVPLEADPPVIAD 363
Query: 341 --------------MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
T A+T + + ++ + +D ++ +G++
Sbjct: 364 DSDGDLLQRLGLVGGADRFETFSADTVSVATRGEAQDAIRTVDIALQEINGIRADLGAVQ 423
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + + + + R++DAD A+E+ L+ Q QQ L+ N +
Sbjct: 424 NRFEATTANLTITSENLSASRSRIMDADFAAETAALTRGQILQQAGTSVLAQANQLPNNV 483
Query: 447 LSLFR 451
L+L +
Sbjct: 484 LNLLQ 488
>gi|289208622|ref|YP_003460688.1| flagellin domain protein [Thioalkalivibrio sp. K90mix]
gi|288944253|gb|ADC71952.1| flagellin domain protein [Thioalkalivibrio sp. K90mix]
Length = 437
Score = 236 bits (600), Expect = 8e-60, Method: Composition-based stats.
Identities = 66/452 (14%), Positives = 135/452 (29%), Gaps = 21/452 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L L +R+SSGLR++ A D+AA +I++ + L+
Sbjct: 4 VINTNILSLNAQRNLSQSQGALGQSLERLSSGLRINSAKDDAAGLAISERFSTQINGLNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S A+ +S D + I+ +D +++ +E QL +++
Sbjct: 64 AVRNANDGISFSQTAEGALSTVGDALQRIRELSVQAANDSNSASDREALNNEAQQLVAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L L I + + + L +
Sbjct: 124 SRVANETEFNGDAILDGALNDIFFQIGANQGQNIAVSGADARATELGRVIAEGSEGLTQT 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + ++ + + D +
Sbjct: 184 QINDVGIEEINNITINLEQVGVLGEGEDNDLGVELEVDLEGMG----------------- 226
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A + S + A N
Sbjct: 227 -VNTLEDAVREINAAIASPDPDNENVGSFVSGEDLDDEEAMAALRDAGLSAALVTNDDGE 285
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ T + D+ G T + +
Sbjct: 286 TTIAIRGNFDTEFSVDGGGVTLEGGDTTDPDVTLFDSDGDGAAVDGQTLNLTDVDIASRS 345
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
E ++ +D + + +GSI R +++ + ++ R+ DAD A E+
Sbjct: 346 GATEALAVVDGALDQVNSLRADLGSIQVRFENTIANLEISSENLDAARSRIRDADFAEET 405
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ LS N ++ +L+L +
Sbjct: 406 AELTRAQILQQAGTSVLSQANATSQNVLALLQ 437
>gi|50830958|gb|AAT81644.1| phase 1 flagellin [Salmonella enterica VII 40:z4,z24:--]
gi|308054809|gb|ADO01451.1| flagellin [Salmonella enterica subsp. houtenae]
gi|308054811|gb|ADO01452.1| flagellin [Salmonella enterica subsp. houtenae]
Length = 426
Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats.
Identities = 69/452 (15%), Positives = 128/452 (28%), Gaps = 32/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A +D + +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGET----------------ITIDLQKIDKTE 167
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
V + + K
Sbjct: 168 LGLDKLDVTKGIATTVSSGASVVGDVKIKEADFKDAKTTGGPAADKLSLVKDDKGNYLVK 227
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D + + ++ + + A A S
Sbjct: 228 DVTVTATPKYYAATVDNSTGEISFDSAKEVTLTGGAPAPSAVDTLSREVKFDGADLKADQ 287
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
K +D + + +
Sbjct: 288 SLVKYKDDKGKDLYAIQTLDKDGNATFKSVTFAADGKTTEGTAVALAAN----------- 336
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 337 --VDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 394
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 395 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 426
>gi|38050193|gb|AAR10715.1| phase 1 flagellin [Salmonella enterica]
gi|308054719|gb|ADO01406.1| flagellin [Salmonella enterica subsp. enterica]
gi|308054721|gb|ADO01407.1| flagellin [Salmonella enterica subsp. enterica]
Length = 426
Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats.
Identities = 81/452 (17%), Positives = 148/452 (32%), Gaps = 32/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D G T + + + D + LD + +
Sbjct: 124 NRVAEQTDFNGKKVLSQD-GQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKGIATT 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G G + + + T A K AT
Sbjct: 183 VSSGASVVGDVKIKEADFKDAKTTGGPAADKLSLVKDDKGNYLVKDVTVTATPKYYAATV 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D + G + A T + S V ++ S + + + +
Sbjct: 243 DNSTGEISFDSAKEVTLAGGAPAPSTVDTLSREVKFDGANLKADQSLVKYKDDKGKDLYA 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
A + + D ++T +
Sbjct: 303 IQTLDKDGNATFKSVTFAADGKTTEGTTVALAAN-------------------------- 336
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 337 --VDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 394
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 395 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 426
>gi|308054717|gb|ADO01405.1| flagellin [Salmonella enterica subsp. enterica]
gi|308054747|gb|ADO01420.1| flagellin [Salmonella enterica subsp. salamae]
Length = 426
Score = 234 bits (595), Expect = 3e-59, Method: Composition-based stats.
Identities = 81/452 (17%), Positives = 148/452 (32%), Gaps = 32/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D G T + + + D + LD + +
Sbjct: 124 NRVAEQTDFNGKKVLSQD-GQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKGIATT 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G G + + + T A K AT
Sbjct: 183 VSSGASVVGDVKIKEADFKDAKTTGGPAADKLSLIKDDKGNYLVKDVTVTATPKYYAATV 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D + G + A T + S V ++ S + + + +
Sbjct: 243 DNSTGEISFDSAKEVTLAGGAPAPSTVDTLSREVKFDGANLKADQSLVKYKDDKGKDLYA 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
A + + D ++T +
Sbjct: 303 IQTLDKDGNATFKSVTFAADGKTTEGTTVALAAN-------------------------- 336
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 337 --VDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 394
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 395 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 426
>gi|313903623|ref|ZP_07837013.1| flagellin domain protein [Thermaerobacter subterraneus DSM 13965]
gi|313466176|gb|EFR61700.1| flagellin domain protein [Thermaerobacter subterraneus DSM 13965]
Length = 435
Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats.
Identities = 68/452 (15%), Positives = 144/452 (31%), Gaps = 22/452 (4%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++A + L N L +R+SSGLR++ AAD+AA +I++ M++ L
Sbjct: 3 INHNVAALNAWRNLSQTNGLLNKSLERLSSGLRINRAADDAAGLAISEKMRAQISGLQTA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+ ++++ ++ ++ D IQ EI QL ++
Sbjct: 63 QRNAQDAISLIQTAEGALNESHSILQRMRELAVQAASDTNTAADRAQIQKEIDQLAQEIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IAR + FN + L + + + + + V+ D
Sbjct: 123 RIARTTEFNTQKLLDGSFEQDGIT------FQIGANAGQNISVKIGNMGGFSLGVVSDQV 176
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + ++ + G + D
Sbjct: 177 KAQATVSATVTTGTTQDIADGTYTARSGASGGYELVDTSGTVVAKSNDGKGWTSTAGGAD 236
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
++ V A + T+ T+ + + + + T D
Sbjct: 237 ADTFTFSVAVTNGTVTIATSGTTTTATASTVVSFTNGGLE-------------AGTYTYD 283
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ T + K SG ++ + + +
Sbjct: 284 ATAKVLKDSSGNVVATEDPTTAGKFIDSKGNVVLDASGLGTLSDGQVFTVSGLDVTSQAS 343
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ D+ I+ + +G+I +R+ + + + ++ R+ D DMA E
Sbjct: 344 ASSAITAFDSAIESVSGQRADLGAIQNRLEHTIANLGVAVENLQAAESRIRDVDMALEMA 403
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ Q Q L+ N +L L +G
Sbjct: 404 NFTRNQILLQSGTAMLAQANAMPQAVLQLLQG 435
>gi|38050197|gb|AAR10717.1| phase 1 flagellin [Salmonella enterica]
gi|308054767|gb|ADO01430.1| flagellin [Salmonella enterica subsp. arizonae]
gi|308054769|gb|ADO01431.1| flagellin [Salmonella enterica subsp. arizonae]
Length = 426
Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats.
Identities = 81/452 (17%), Positives = 149/452 (32%), Gaps = 32/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D G T + + + D + LD + +
Sbjct: 124 NRVAEQTDFNGKKVLSQD-GQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKGIATT 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G G + + + T A K AT
Sbjct: 183 VSSGASVVGDVKIKEADFKDAKTTGGPAADKLSLVKDDKGNYLVKDVTVTATPKYYAATV 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D + G + A +T + S V ++ S + + + +
Sbjct: 243 DNSTGEISFDSAKEVTLAGGASTPSAVDTLSREVKFDGADLKADQSLVKYKDDKGKDLYA 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
A + + D ++T +
Sbjct: 303 IQTLDKDGNASFKSVTFSSDGKTTEGTAVALAAN-------------------------- 336
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 337 --VDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 394
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 395 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 426
>gi|308054771|gb|ADO01432.1| flagellin [Salmonella enterica subsp. arizonae]
Length = 426
Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats.
Identities = 81/452 (17%), Positives = 149/452 (32%), Gaps = 32/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D G T + + + D + LD + +
Sbjct: 124 NRVAEQTDFNGKKVLSQD-GQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKGIATT 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G G + + + T A K AT
Sbjct: 183 VSSGASVVGDVKIKEADFKDAKTTGGPAADKLSLVKDDKGNYLVKDVTVTATPKYYAATV 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D + G + A +T + S V ++ S + + + +
Sbjct: 243 DNSTGEISFDSAKEVTLAGGASTPSAVDTLSREVKFDGADLKADQSLVKYKDDKGKDLYA 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
A + + D ++T +
Sbjct: 303 IQTLDKDGNASFKSVTFSSDGKTTEGAAVALAAN-------------------------- 336
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 337 --VDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 394
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 395 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 426
>gi|116489792|gb|ABJ98803.1| phase I flagellin middle domain variant C47 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 457
Score = 233 bits (592), Expect = 6e-59, Method: Composition-based stats.
Identities = 73/454 (16%), Positives = 135/454 (29%), Gaps = 5/454 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDR--NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ Y ++ D K
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ + T A A T G + + V + + D + AT
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVKTIDGGLAVKVGDDYYSATQNKDG 303
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ T T + + S + + A
Sbjct: 304 SISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAA 363
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
E + ID + +G++ +R + + + + R+ D+D A+
Sbjct: 364 ATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYAT 423
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + +S Q QQ L+ N +LSL R
Sbjct: 424 EVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 457
>gi|116489794|gb|ABJ98804.1| phase I flagellin middle domain variant C116 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 457
Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats.
Identities = 72/454 (15%), Positives = 134/454 (29%), Gaps = 5/454 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDR--NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ Y ++ D K
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ + T A A T G + + + + D + AT
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATADNNGKTIDGGLAVKVGDDYYSATQNKDG 303
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ T T + + S + + A
Sbjct: 304 SISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAA 363
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
E + ID + +G++ +R + + + + R+ D+D A+
Sbjct: 364 ATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYAT 423
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + +S Q QQ L+ N +LSL R
Sbjct: 424 EVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 457
>gi|289208624|ref|YP_003460690.1| flagellin domain protein [Thioalkalivibrio sp. K90mix]
gi|288944255|gb|ADC71954.1| flagellin domain protein [Thioalkalivibrio sp. K90mix]
Length = 431
Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats.
Identities = 73/452 (16%), Positives = 146/452 (32%), Gaps = 27/452 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + L +R+SSGLR++ A D+AA +I++ + L+
Sbjct: 4 VINTNILSLNAQRNLSNSQGALAQSLERLSSGLRINSAKDDAAGLAISERFTTQIRGLNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S A+ +S D + I+ +D +++ +E QL +++
Sbjct: 64 AVRNANDGISFAQTAEGALSTVGDALQRIRELSVQAANDSNSASDREALNNEAQQLIAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L L I + + + ++ L
Sbjct: 124 GRVANSTEFNGDAILDGALQDLFFQIGANQGQNIAVSGVDARTTELGRAISEGDSGLTQQ 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G+ + + + D D ++ L A A
Sbjct: 184 QLNDVGIEGISNITITLDKVGVLGGDDDDALGVELEVDLDGVTSLEDAVRQINAALAAPT 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A G A A + + + T I + + +
Sbjct: 244 GDAAGSLEDGELDDADAAIAAIRDAGLSASLVTNSNGETTIAIRGNFDTSFSVQG----- 298
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ L + D + R+ +
Sbjct: 299 -------------------GKVELGDEVEVTLFGDGDDADPTSVDSRARNLTDVDIGSRG 339
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
E ++ +D + + +GSI R +++ + +E R+ DAD ASE+
Sbjct: 340 GATEALAIVDGALNQINSLRADLGSIQVRFENTIANLQVSSENLESARSRIRDADFASET 399
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ L+ N ++ +L+L +
Sbjct: 400 AELTRAQILQQAGTSVLAQANATSQNVLALLQ 431
>gi|555642|gb|AAA53493.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Enteritidis var. danysz]
Length = 465
Score = 231 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/463 (15%), Positives = 131/463 (28%), Gaps = 14/463 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN--------GKVQITTIDYYLD 171
++ + FNG L D A I +
Sbjct: 123 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIVLQKIDVKSLGLDGFNVNGPKEATV 182
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ + G + Y +++ + + + + +
Sbjct: 183 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAENNT 242
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
T G A A + + ++ G +
Sbjct: 243 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGNDGNGKVSTTING 302
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA- 350
+D + V S K + + L
Sbjct: 303 EKVTLTVADIATGATDVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 362
Query: 351 --NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
+ N ++ ID+ + A +G+I +R + +
Sbjct: 363 GESKITVNGAEYTANPLASIDSALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARS 422
Query: 409 RLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ DAD A+E + +S Q QQ L+ N +LSL R
Sbjct: 423 RIEDADYATEVSNMSKAQILQQAGTSVLAQANQVPQNVLSLLR 465
>gi|332284051|ref|YP_004415962.1| flagellin [Pusillimonas sp. T7-7]
gi|330428004|gb|AEC19338.1| flagellin [Pusillimonas sp. T7-7]
Length = 444
Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats.
Identities = 69/454 (15%), Positives = 140/454 (30%), Gaps = 13/454 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I TN+ A+ + L L +R+SSGLR++ A D+AA +IA ++ L
Sbjct: 1 MSVINTNYLALVSQNNLTKSQGALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ + G S + +++ + + ++ +D KSIQ EI Q
Sbjct: 61 TQATRNANDGISIAQTTEGALNEINNNLQRVRELSVQASNGTNSASDLKSIQEEIDQRLE 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +++ + FNG L + + + + T + L
Sbjct: 121 EIDRVSQQTQFNGVKVLASGAAPLKVQVGANDGETISIGLKEISSTTLQLTDFSVQKNTL 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ LD + + S I++ + +
Sbjct: 181 SAGAALDLDNDQLDNSTSTSGIDISAVLTGLKDAGISADINSITLHKVNDATGAGTDGSY 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
V AA +T S + + + ++ N
Sbjct: 241 AVKVGDEYYAATVVKSAATGTKDTVSLAKLTVTNGYEYTDANGTDKTKNVDTFIKLSNDA 300
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
V + + + +++ + + A
Sbjct: 301 AGA----------VKAYATVEGSNYEVTSAFATATGWANDTTTVINTETSDPSGNTAEFH 350
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ +D +K A +G+I +R + + R+ DAD A
Sbjct: 351 GVGTANPLAKLDEALKTVDALRSDLGAIQNRFQSTIANLSNTVTNLSAARSRIEDADYAV 410
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + ++ Q QQ L+ N +LSL R
Sbjct: 411 EVSNMTRAQILQQAGTSVLAQANQVPQGVLSLLR 444
>gi|38050189|gb|AAR10713.1| phase 1 flagellin [Salmonella enterica]
Length = 421
Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats.
Identities = 78/452 (17%), Positives = 146/452 (32%), Gaps = 37/452 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A I +D + +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKGIATTV 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S+ + + K D + + + + T
Sbjct: 184 SSGASVVGDVKIAAADFKDAKTGGPAADKLSLTQDDKGNYFVKDDTAAAKYYAATVDTTP 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + V A +T + + +
Sbjct: 244 GKISFDSDKDVTASAGTPTAVSTLSREVKFDGADLKADQSL------------------- 284
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
Y D + L + + L K+ ++ + VT + A
Sbjct: 285 ---------------VKYKDDKGKDLYAIQTLDKDGNASFKSVTFSSDGKTTEGAAVALA 329
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 330 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 389
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 390 SNMSRAQILQQAGTSVLAQANQVPQSVLSLLR 421
>gi|308054763|gb|ADO01428.1| flagellin [Salmonella enterica subsp. arizonae]
Length = 424
Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats.
Identities = 70/452 (15%), Positives = 137/452 (30%), Gaps = 34/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A I +D + +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKGIATTV 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S+ + + + + K T
Sbjct: 184 SSGASVVGDVKIKEADFDNAKATGGPAADKLSLTKDDKGNYFVKDDT------------- 230
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + S + + + T + S+
Sbjct: 231 -TTGAAKYYAATVDTTTGKISFDSDKDVTATAGTPPAVTTLSREVKFDGADLKADQSLVK 289
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + ++ D + ++
Sbjct: 290 YKDDKGKDLYAIQTLDKDGNASFKSVTFSSDGKTTEGAAVALA----------------- 332
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 333 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 392
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 393 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 424
>gi|38050195|gb|AAR10716.1| phase 1 flagellin [Salmonella enterica]
Length = 426
Score = 230 bits (584), Expect = 5e-58, Method: Composition-based stats.
Identities = 81/452 (17%), Positives = 147/452 (32%), Gaps = 32/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDVAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D G T + + + D + LD + +
Sbjct: 124 NRVAEQTDFNGKKVLSQD-GQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKGIATT 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G G + + + T A K AT
Sbjct: 183 VSSGASVVGDVKIKEADFKDAKTTGGPAADKLSLIKDDKGNYLVKDVTVTATPKYYAATV 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D + G + A T + S V ++ S + + + +
Sbjct: 243 DNSTGEISFDSAKEVTLAGGAPAPSTVDTLSREVKFDGANLKADQSLVKYKDDKGKDLYA 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
A + + D ++T +
Sbjct: 303 IQTLDKDGNATFKSVTFAADGKTTEGTTVALAAN-------------------------- 336
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 337 --VDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 394
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 395 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 426
>gi|116489786|gb|ABJ98800.1| phase I flagellin middle domain variant C174 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 462
Score = 230 bits (584), Expect = 6e-58, Method: Composition-based stats.
Identities = 63/459 (13%), Positives = 134/459 (29%), Gaps = 10/459 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + + G + + +
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + + + V+ +
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVKDNNGKTIDGGLAVKVGDDYYSAT 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTES-------TTLDSRKDLPKEIDSGYSMVTLNITRHANT 352
+ ++ T +++ + S + +
Sbjct: 304 QNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPD 363
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
A E + ID + +G++ +R + + + + R+ D
Sbjct: 364 LAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIED 423
Query: 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 SDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 462
>gi|38050201|gb|AAR10719.1| phase 1 flagellin [Salmonella enterica]
gi|308054813|gb|ADO01453.1| flagellin [Salmonella enterica subsp. houtenae]
gi|308054815|gb|ADO01454.1| flagellin [Salmonella enterica subsp. houtenae]
Length = 422
Score = 230 bits (584), Expect = 6e-58, Method: Composition-based stats.
Identities = 69/452 (15%), Positives = 134/452 (29%), Gaps = 36/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A +D + +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGET----------------ITIDLQKIDKTE 167
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
V + + K
Sbjct: 168 LGLDKLDVTKGIATTVSSGASVVGDVKIKEADFKDAKTTGGPAADKLSLTKDDKGNYFVK 227
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D + + S + + ++ T + S+
Sbjct: 228 DVTATAKYYAATVDTTTGKISFDSDKDVTATAGAPSAVTTLSREVKFDGADLKADQSLVK 287
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + ++ D + ++
Sbjct: 288 YKDDKGKDLYAIQTLDKDGNATFKSVTFAADGKTTEGTAVALA----------------- 330
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 331 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 390
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 391 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 422
>gi|38050199|gb|AAR10718.1| phase 1 flagellin [Salmonella enterica]
gi|38050283|gb|AAR10760.1| phase 1 flagellin [Salmonella enterica]
gi|308054765|gb|ADO01429.1| flagellin [Salmonella enterica subsp. arizonae]
Length = 422
Score = 229 bits (583), Expect = 6e-58, Method: Composition-based stats.
Identities = 69/452 (15%), Positives = 134/452 (29%), Gaps = 36/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A +D + +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGET----------------ITIDLQKIDKTE 167
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
V + + K
Sbjct: 168 LGLDKLDVTKGIATTVSSGASVVGDVKIKEADFKDAKTTGGPAADKLSLTKDDKGNYFVK 227
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D + + S + + ++ T + S+
Sbjct: 228 DVTATAKYYAATVDTTTGKISFDSDKDVTATAGSPSAVTTLSREVKFDGADLKADQSLVK 287
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + ++ D + ++
Sbjct: 288 YKDDKGKDLYAIQTLDKDGNATFKSVTFAADGKTTEGTAVALA----------------- 330
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 331 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 390
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 391 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 422
>gi|116489796|gb|ABJ98805.1| phase I flagellin middle domain variant C6 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 454
Score = 229 bits (583), Expect = 6e-58, Method: Composition-based stats.
Identities = 68/452 (15%), Positives = 129/452 (28%), Gaps = 4/452 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D T + + + D T L+ + S
Sbjct: 124 DRVSGQTQFNGVKVLAQDNT-LTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVS 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T T +
Sbjct: 183 DTAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGK 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D ++ + + + + D + AT +
Sbjct: 243 DGYYEVSVDKTNGEVTLVTGTASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSI 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T T + + S + + A
Sbjct: 303 SINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAAT 362
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
E + ID + +G++ +R + + + + R+ D+D A+E
Sbjct: 363 TTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEV 422
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 423 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 454
>gi|220935150|ref|YP_002514049.1| flagellin domain-containing protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219996460|gb|ACL73062.1| flagellin domain-containing protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 462
Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats.
Identities = 64/458 (13%), Positives = 152/458 (33%), Gaps = 10/458 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++A + L + L+ R+SSGLR++ A D+AA +I++ + L+
Sbjct: 5 INTNVLSLNAQRNLTNSQSALQTSLQRLSSGLRINSAKDDAAGLAISERFTTQIRGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S A+ +S D + I+ +D +++ +E+ QL +++
Sbjct: 65 VRNANDGISFAQTAEGALSTVGDALQRIRELAVQSANDTNSSSDRQALNNEVQQLIAEVN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + FNG+ L L + + + + + ++ L
Sbjct: 125 RVANATEFNGQKILDGSLSELVFQVGANQNQTITVNGVDARASQLGARVAEGDSALSGDF 184
Query: 181 TDGTER-------YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233
T + ++ + V+ +A + L++ + A
Sbjct: 185 TGAFDFGTPGTLAIQGVEIDLADLNTDATSLTEVVNRINALSAETGVTAALSSQAEATFA 244
Query: 234 AANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATT 293
A I + + + + A + + + ++ T
Sbjct: 245 ITAADAAGTLNINGVNIAVDSGDTAELLAGKINALSNQTGVTASFDGADLTLTSNGDITI 304
Query: 294 KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD 353
+ + + G +D + ++ R
Sbjct: 305 ERTGGGALVIGGLGAGESGTIMRGIDLATNVGQDILVATTGSADDLNITAGGTDRALTDQ 364
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ + + +D ++ + ++G++ R + + + + R+ DA
Sbjct: 365 NVLSRERANQTIQVMDFALQQVSGLRAELGAVQVRFESTISNLGVSVENLSAARSRIRDA 424
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D A+E+ L+ Q QQ + L+ N +L+L +
Sbjct: 425 DFAAETAELTRAQILQQAGISVLAQANAVPQSVLALLQ 462
>gi|116489780|gb|ABJ98797.1| phase I flagellin middle domain variant C120 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 465
Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats.
Identities = 69/462 (14%), Positives = 134/462 (29%), Gaps = 13/462 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAK----------SVIGSFIRDDNGKVQITTIDYY 169
++ + FNG L D + A + + D VQ
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 170 LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
+T + + Q + + T
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 230 AWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
+ + + + +A T + + + D +
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEVKMSYTDNNGKTIDGGLAVKVGDDYY 303
Query: 290 RATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRH 349
AT + T T + + S + +
Sbjct: 304 SATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKA 363
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
A E + ID + +G++ +R + + + + R
Sbjct: 364 QPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSR 423
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 IEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 465
>gi|50830956|gb|AAT81643.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Stanleyville]
Length = 422
Score = 229 bits (582), Expect = 9e-58, Method: Composition-based stats.
Identities = 69/452 (15%), Positives = 134/452 (29%), Gaps = 36/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A +D + +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGET----------------ITIDLQKIDKTE 167
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
V + + + + K
Sbjct: 168 LGLDKLDVTKGIATTVSSGASVVGDVKIAAADFDNAKTTGGPAADKLSLTKDDKGNYFVK 227
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D + + S + + + T + S+
Sbjct: 228 DVTATAKYYAATVDMTTGKISFDSDKDVTATAGTPPAVTTLSREVKFDGADLKADQSLVK 287
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + ++ D + +
Sbjct: 288 YKDDKGKDLYAIQTLDKDGNATFKSVTFAADGKTTEGTAVDLA----------------- 330
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 331 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 390
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 391 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 422
>gi|161502920|ref|YP_001570032.1| hypothetical protein SARI_00979 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|38050181|gb|AAR10709.1| phase 1 flagellin [Salmonella enterica]
gi|50830954|gb|AAT81642.1| phase 1 flagellin [Salmonella enterica subsp. arizonae serovar
62:z4,z23:--]
gi|160864267|gb|ABX20890.1| hypothetical protein SARI_00979 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
gi|308054761|gb|ADO01427.1| flagellin [Salmonella enterica subsp. arizonae]
Length = 424
Score = 229 bits (582), Expect = 9e-58, Method: Composition-based stats.
Identities = 70/452 (15%), Positives = 136/452 (30%), Gaps = 34/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A I +D + +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKGIATTV 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S+ + + + K T
Sbjct: 184 SSGASVVGDVKIAAADFDNAKTTGGPAADKLSLTKDDKGNYFVKDDT------------- 230
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + S + + + T + S+
Sbjct: 231 -TTGAAKYYAATVDTTTGKISFDSDKDVTATAGTPPAVTTLSREVKFDGADLKADQSLVK 289
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + ++ D + ++
Sbjct: 290 YKDDKGKDLYAIQTLDKDGNASFKSVTFSSDGKTTEGTAVALA----------------- 332
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 333 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 392
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 393 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 424
>gi|299531268|ref|ZP_07044678.1| flagellin-like protein [Comamonas testosteroni S44]
gi|298720675|gb|EFI61622.1| flagellin-like protein [Comamonas testosteroni S44]
Length = 489
Score = 229 bits (582), Expect = 1e-57, Method: Composition-based stats.
Identities = 73/486 (15%), Positives = 141/486 (29%), Gaps = 37/486 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I TN +++A + L +L R+SSGLR++ A D+AA +IA+ M + L+
Sbjct: 4 TINTNIQSLNAQRNLGTSQSSLSTSMQRLSSGLRINSAKDDAAGLAIAERMSAQVRGLNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ +S + I+ D ++Q E+ QL+S++
Sbjct: 64 AQRNANDGVSLAQTAEGALSTIGGNLQRIRELAVQSRNATNSTEDRAALQKEVVQLKSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ +SFNG L S + + D + + + +
Sbjct: 124 DRVSTDTSFNGTKLLDGSFTSKAFQVGANQGQIINIDSIVDASTSQLGTWQSVDIAATAE 183
Query: 180 STDGTERYGLLDRN----------------------------------HKIKVEPQVLKD 205
+ +++ V +
Sbjct: 184 GSVIKASNVTATSTTASGTFAAPAAGAAKLDVDGVTLIDRTTTAGNLLTASEIDTAVANN 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
D I T + T +
Sbjct: 244 KDALAAKGISAIGTAAAGTLQFIKRDGTDFSITNTAMGMPGMEATGSITNGSPAFPAIAA 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL 325
A T +D + T+ G ++ + T +
Sbjct: 304 GSLTINGKAIDVTTDSTSVADFGSKITSAIESAFADGSVKASFSSGKLTVTSDNQSLVIA 363
Query: 326 DSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
S + V + + + +D +K +A +G+I
Sbjct: 364 GSDPSKFGLTAGTKTFVAGKNETGFEGVDISTVGGADNAIIAMDAALKAVNSARADLGAI 423
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445
+R + + + + R++DAD A+E+ LS Q QQ ++ N
Sbjct: 424 QNRFESVVSNLSVNSENLSASKSRIMDADFAAETANLSRSQILQQAGTAMVAQANQLPQG 483
Query: 446 ILSLFR 451
+LSL R
Sbjct: 484 VLSLLR 489
>gi|317121032|ref|YP_004101035.1| flagellin domain protein [Thermaerobacter marianensis DSM 12885]
gi|315591012|gb|ADU50308.1| flagellin domain protein [Thermaerobacter marianensis DSM 12885]
Length = 485
Score = 229 bits (582), Expect = 1e-57, Method: Composition-based stats.
Identities = 72/479 (15%), Positives = 147/479 (30%), Gaps = 32/479 (6%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++A + L N L +R+SSGLR++ AAD+AA +I++ M++ L
Sbjct: 5 INHNVAALNAWRNLSQTNSLLNKSLERLSSGLRINRAADDAAGLAISEKMRAQIAGLQTA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ D ++Q E+ QL ++L
Sbjct: 65 QRNAQDAISLIQTAEGALNETHSILQRMRELAVQASNDSMTDADRANLQKEVEQLIAELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN + L G STA + + D T + +
Sbjct: 125 RIGNTTEFNTKKLLDGSAGVSTAIASGKALNVSATGDTQAGSYTIDIKAAATRGEVWLAQ 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D + + L + + + T +
Sbjct: 185 ADDATSTFWTTFSDVNATLVKDLDITVNGRRYFFAAGTKVQDVIDTVNADSALTGVEADF 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A I + +A T + + + + A++ + + + S+ +
Sbjct: 245 NANAIRFRTTDVGSARQVSVTINSNTTFFNVANASTGATSDVNAATVAGTDAELGSLGVN 304
Query: 301 PGYTNSTVAKVGNT-----------------------------HYYVDTESTTLDSRKDL 331
N T V T
Sbjct: 305 GTPVNYEAVGNRITILSGPAKGLSFTVDASGTYTGGSNADDDPTITVGTNGALTFQIGAN 364
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ S + T + + +S ID+ I + ++G++ +R+
Sbjct: 365 TGQSLSVAIDDMRSQALGVKTVDVSTRSGASNAISAIDSAINTVSVQRARLGAVQNRLEH 424
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + ++ R+ D DMA E + Q Q L+ N +L L
Sbjct: 425 TIANLGVAVENLQAAESRIRDVDMALEMANFTRNQILLQSGTAMLAQANAMPQAVLQLL 483
>gi|116489788|gb|ABJ98801.1| phase I flagellin middle domain variant C21 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 461
Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats.
Identities = 70/458 (15%), Positives = 129/458 (28%), Gaps = 9/458 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG------SFIRDDNGKVQITTIDYYLDPE 173
++ + FNG L D + A G + Y +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 174 TVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233
T + T T K+ T G
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 234 AANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATT 293
+P + + + + D + AT
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPVTGTASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQ 303
Query: 294 KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD 353
+ T T + + S + +
Sbjct: 304 NKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDL 363
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
A E + ID + +G++ +R + + + + R+ D+
Sbjct: 364 AEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDS 423
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 DYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 461
>gi|38050151|gb|AAR10694.1| phase 1 flagellin [Salmonella enterica]
Length = 421
Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats.
Identities = 77/452 (17%), Positives = 134/452 (29%), Gaps = 37/452 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSDSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A I +D +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKG----- 178
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+K ++ D V V D +T K F
Sbjct: 179 ------------IATTVKEGTKLTADFAVKVADFDDQATTGKLTADLELKQDKSGNYFAF 226
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D+A A T+ + + + I T +
Sbjct: 227 DKANSKYYDATVDAATGKIEFTSGTGKETTKDTSKLTDVTSLSKEVTIDSGLTDDKLLVK 286
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G V + Y +
Sbjct: 287 YKGDDGKEQYAVQTLDNKGNAT-----------------YKTAVIARDGKVTEGTAVALA 329
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 330 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 389
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 390 SNMSRAQILQQAGTSVLAQANQVPQSVLSLLR 421
>gi|38050173|gb|AAR10705.1| phase 1 flagellin [Salmonella enterica]
gi|38050183|gb|AAR10710.1| phase 1 flagellin [Salmonella enterica]
Length = 422
Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats.
Identities = 69/452 (15%), Positives = 134/452 (29%), Gaps = 36/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A +D + +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGET----------------ITIDLQKIDKTE 167
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
V + + + + K
Sbjct: 168 LGLDKLDVTKGIATTVSSGASVVGDVKIAAADFDNAKATGGPAADKLSLTKDDKGNYFVK 227
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D + + S + + + T + S+
Sbjct: 228 DDTAAAKYYAATVDTTTGKISFDSDKDVTATAGTPPAVTTLSREVKFDGADLKADQSLVK 287
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + ++ D + +
Sbjct: 288 YKDDKGKDLYAIQTLDKDGNATFKSVTFAADGKTTEGTAVDLA----------------- 330
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 331 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 390
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 391 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 422
>gi|116489776|gb|ABJ98795.1| phase I flagellin middle domain variant C33 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 469
Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats.
Identities = 73/466 (15%), Positives = 142/466 (30%), Gaps = 17/466 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTA--------------SIAKSVIGSFIRDDNGKVQITT 165
++ + FNG L D + I +G + K +++
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+ + + T + + LK D + + T
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
+ N A G + A A + + + + +
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVSVVKMSYTDNNGKTIDGGLAVKVG 303
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
D + AT + T T + + S +
Sbjct: 304 DDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGH 363
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ A E + ID + +G++ +R + + + +
Sbjct: 364 NFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTS 423
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 ARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 469
>gi|38050157|gb|AAR10697.1| phase 1 flagellin [Salmonella enterica]
gi|38050159|gb|AAR10698.1| phase 1 flagellin [Salmonella enterica]
Length = 421
Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats.
Identities = 76/452 (16%), Positives = 134/452 (29%), Gaps = 37/452 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSDSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A I +D +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKG----- 178
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+K ++ D V V D +T K +
Sbjct: 179 ------------IATTVKEGTKLTADFAVKVADFDDKATTGKLTANLELKQDKSGNYFAY 226
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D+ A T+ + + + I T S+
Sbjct: 227 DKTASKYYDATVDTATGKIEFTSGAGKETTKDTSKLTDVTSLSKEVTIDSGLTDDKSLVK 286
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G V + Y +
Sbjct: 287 YKGDDGKEQYAVQTLDNKGNAT-----------------YKTAVIARDGKVTEGTAVALA 329
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 330 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 389
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 390 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 421
>gi|116489778|gb|ABJ98796.1| phase I flagellin middle domain variant C62 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 466
Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 73/463 (15%), Positives = 138/463 (29%), Gaps = 14/463 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR-----------DDNGKVQITTIDY 168
++ + FNG L D + A I D Q +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
T D++ + ++ D+
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
G + + + T + PL A T+ + + + D +
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATATSVVKMSYTDNNGKTIDGGLAVKVGDDY 303
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR 348
AT + T T + + S + +
Sbjct: 304 YSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFK 363
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
A E + ID + +G++ +R + + + +
Sbjct: 364 AQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARS 423
Query: 409 RLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 RIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 466
>gi|38050187|gb|AAR10712.1| phase 1 flagellin [Salmonella enterica]
gi|38050205|gb|AAR10721.1| phase 1 flagellin [Salmonella enterica]
Length = 421
Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 78/452 (17%), Positives = 146/452 (32%), Gaps = 37/452 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A I +D + +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKGIATTV 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S+ + + K D + + + + T
Sbjct: 184 SSGASVVGDVKIAAADFKDAKTGGPAADKLSLTQDDKGNYFVKDDTAAAKYYAATVDTTT 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + V A +T + + +
Sbjct: 244 GKISFDSDKDVTASAGTPTAVSTLSREVKFDGADLKADQSL------------------- 284
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
Y D + L + + L K+ ++ + VT + A
Sbjct: 285 ---------------VKYKDDKGKDLYAIQTLDKDGNASFKSVTFSSDGKTTEGAAVALA 329
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 330 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 389
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 390 SNMSRAQILQQAGTSVLAQANQVPQSVLSLLR 421
>gi|38050203|gb|AAR10720.1| phase 1 flagellin [Salmonella enterica]
Length = 422
Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 81/452 (17%), Positives = 145/452 (32%), Gaps = 36/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA + S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRLTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D G T + + + D + LD + +
Sbjct: 124 NRVAEQTDFNGKKVLSQD-GQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKGIATT 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G G + + + + K T + A AA
Sbjct: 183 VSSGASVVGDVKIKEADFKDAKTGGPAADKLSLTQDDKGNYFVKDDTAAAAKYYAATVDT 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
K + A+ P S S A + T
Sbjct: 243 TTGKISFDSDKDVTASAGTPTAVSTLSREVKFDGADLKADQSLVKYKDDKGKDLYAIQTL 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
D S + ++ + +
Sbjct: 303 DKDGNASFKSVTFSSDGKTTEGTAVALA-------------------------------- 330
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 331 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 390
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 391 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 422
>gi|308054773|gb|ADO01433.1| flagellin [Salmonella enterica subsp. arizonae]
Length = 422
Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 73/452 (16%), Positives = 133/452 (29%), Gaps = 36/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A I +D +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKG----- 178
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ V+ D+ + D + + K
Sbjct: 179 ------------IATTVSSGASVVGDVKIKEADFKDAKTGGPAADKLSLTQDDKGNYFVK 226
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D A + + + +A +
Sbjct: 227 DDTAAAAKYYAATVDTTTGKISFDSDKDVTASAGTPTAVSTLSREVKFDGAGLKADQSLV 286
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T S + K + +
Sbjct: 287 KYKDDKGKDLYAIQTLDKDGNASFKSVTFSSDGKTTEGAAVALA---------------- 330
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 331 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 390
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 391 SNMSRAQILQQAGTSVLAQANQVPQSVLSLLR 422
>gi|38050153|gb|AAR10695.1| phase 1 flagellin [Salmonella enterica]
Length = 421
Score = 228 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 75/452 (16%), Positives = 134/452 (29%), Gaps = 37/452 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSDSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A I +D +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKG----- 178
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+K ++ D V V D +T K F
Sbjct: 179 ------------IATTVKEGTKLTADFAVKVADFDDQATTGKLTADLELKQDKSGNYFAF 226
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D+A A T+ + + + I T +
Sbjct: 227 DKANSKYYDATVDAATGKIEFTSGTGKETTKDTSKLTDVTSLSKEVTIDSGLTDDKLLVK 286
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G V + Y +
Sbjct: 287 YKGDDGKEQYAVQTLDNKGNAT-----------------YKTAVIARDGKVTEGTAVALA 329
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 330 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 389
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 390 SNMSRAQILQQAGTSVLAQANQVPQSVLSLLR 421
>gi|38050161|gb|AAR10699.1| phase 1 flagellin [Salmonella enterica]
Length = 421
Score = 228 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 74/452 (16%), Positives = 132/452 (29%), Gaps = 37/452 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSDSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A I +D +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKG----- 178
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+K ++ D V D + K +
Sbjct: 179 ------------IATTVKEGTKLTADFAVKDADFDDKSTGTKVTANLELKQDKSGNYFAY 226
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D+ A T+ + + + I T S+
Sbjct: 227 DKTASKYYDATVDTATGKIEFTSGTGKETTKDTSKLTDVTSLSKEVTIDSGLTDDKSLVK 286
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G V + Y +
Sbjct: 287 YKGDDGKEQYAVQTLDNKGNAT-----------------YKTAVIARDGKVTEGTAVALA 329
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 330 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 389
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 390 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 421
>gi|38050171|gb|AAR10704.1| phase 1 flagellin [Salmonella enterica]
gi|38050177|gb|AAR10707.1| phase 1 flagellin [Salmonella enterica]
gi|38050185|gb|AAR10711.1| phase 1 flagellin [Salmonella enterica]
Length = 422
Score = 228 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 69/452 (15%), Positives = 135/452 (29%), Gaps = 36/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A +D + +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGET----------------ITIDLQKIDKTE 167
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
V + + + + K
Sbjct: 168 LGLDKLDVTKGIATTVSSGASVVGDVKIAAADFDNAKATGGPAADKLSLTKDDKGNYFVK 227
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D + + S + + + T + S+
Sbjct: 228 DDTGAAKYYAATVDTTTGKISFDSDKDATATAGTPPAVTTLSREVKFDGADLKADQSLVK 287
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + ++ D + ++
Sbjct: 288 YKDDKGKDLYAIQTLDKDGNATFKSVTFAADGKTTEGTAVALA----------------- 330
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 331 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 390
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 391 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 422
>gi|38050191|gb|AAR10714.1| phase 1 flagellin [Salmonella enterica]
Length = 421
Score = 228 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 77/452 (17%), Positives = 145/452 (32%), Gaps = 37/452 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +I S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIVNRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A I +D + +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKGIATTV 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S+ + + K D + + + + T
Sbjct: 184 SSGASVVGDVKIAAADFKDAKTGGPAADKLSLTQDDKGNYFVKDDTAAAKYYAATVDTTT 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + V A +T + + +
Sbjct: 244 GKISFDSDKDVTASAGTPTAVSTLSREVKFDGADLKADQSL------------------- 284
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
Y D + L + + L K+ ++ + VT + A
Sbjct: 285 ---------------VKYKDDKGKDLYAIQTLDKDGNASFKSVTFSSDGKTTEGAAVALA 329
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 330 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 389
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 390 SNMSRAQILQQAGTSVLAQANQVPQSVLSLLR 421
>gi|308054805|gb|ADO01449.1| flagellin [Salmonella enterica subsp. houtenae]
Length = 424
Score = 228 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 70/452 (15%), Positives = 136/452 (30%), Gaps = 34/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A I +D + +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKGIATTV 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S+ + + + K T
Sbjct: 184 SSGASVVGDVKIAAADFNNAKGTGGPAADKLSLTKDDKGNYFVKDDT------------- 230
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + S + + + T + S+
Sbjct: 231 -TTGAAKYYAATVDTTTGKISFDSDKDATATAGTPPAVTTLSREVKFDGADLKADQSLVK 289
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + ++ D + ++
Sbjct: 290 YKDDKGKDLYAIQTLDKDGNATFKSVTFAADGKTTEGTAVALA----------------- 332
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 333 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 392
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 393 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 424
>gi|116489772|gb|ABJ98793.1| phase I flagellin middle domain variant C27 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 470
Score = 228 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 76/467 (16%), Positives = 138/467 (29%), Gaps = 18/467 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ-----ITTIDYYLDPET 174
++ + FNG L D + A I Q +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ L + K D + + K + T +G K
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
K + + A T+ SV + G + A
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVASVVKMSYTDNNGKTIDGGLAVKV 303
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE----------IDSGYSMVTL 344
+ T Y D ++ K + S
Sbjct: 304 GDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEG 363
Query: 345 NITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVE 404
+ + A E + ID + +G++ +R + + + +
Sbjct: 364 HNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLT 423
Query: 405 KGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 SARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 470
>gi|116489800|gb|ABJ98807.1| phase I flagellin middle domain variant C39 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 451
Score = 228 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 79/452 (17%), Positives = 140/452 (30%), Gaps = 7/452 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A D QI + LD V
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGAN----DGETIDIDLKQINSQTLGLDTLNVQQKY 179
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T + I ++ K + I TT + K
Sbjct: 180 KVSDTAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGG 239
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + V L AA + + + + D + AT +
Sbjct: 240 TGKDGYYEVSVALTAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSI 299
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T T + + S + + A
Sbjct: 300 SINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAAT 359
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
E + ID + +G++ +R + + + + R+ D+D A+E
Sbjct: 360 TTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEV 419
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 420 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 451
>gi|38050273|gb|AAR10755.1| phase 1 flagellin [Salmonella enterica]
Length = 422
Score = 228 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 81/452 (17%), Positives = 144/452 (31%), Gaps = 36/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D G T + + + D + LD + +
Sbjct: 124 NRVAEQTDFNGKKVLSQD-GQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKGIATT 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G G + + + + K T + A AA
Sbjct: 183 VSSGASVVGDVKIKEADFKDAKTGGPAADKLSLTQDDKGNYFVKDDTAAAAKYYAATVDT 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
K + A+ P S S A + T
Sbjct: 243 TTGKISFDSDKDVTASAGTPTAVSTLSREVKFDGADLKADQSLVKYKDDKGKDLYAIQTL 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
D S + ++ + +
Sbjct: 303 DKDGNASFKSVTFSSDGKTTEGTAVALA-------------------------------- 330
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 331 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 390
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 391 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 422
>gi|116489798|gb|ABJ98806.1| phase I flagellin middle domain variant C14 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 452
Score = 228 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 66/452 (14%), Positives = 133/452 (29%), Gaps = 6/452 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D T + + + D T L+ + S
Sbjct: 124 DRVSGQTQFNGVKVLAQDNT-LTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVS 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T T +
Sbjct: 183 DTAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGK 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D ++ + + + +++G+ SI+
Sbjct: 243 DGYYEVSVDKTNGEVVTGTASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISI 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + K + + + +A
Sbjct: 303 NTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAAT-- 360
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
E + ID + +G++ +R + + + + R+ D+D A+E
Sbjct: 361 TTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEV 420
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 421 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 452
>gi|269103181|ref|ZP_06155878.1| flagellin protein flaB [Photobacterium damselae subsp. damselae CIP
102761]
gi|268163079|gb|EEZ41575.1| flagellin protein flaB [Photobacterium damselae subsp. damselae CIP
102761]
Length = 468
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 64/464 (13%), Positives = 137/464 (29%), Gaps = 16/464 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + + +++SSGLR++ A D+AA I+ + S L+
Sbjct: 4 TVNTNVSAMTAQRYLNSASNGVANSMEKLSSGLRINSAKDDAAGLQISNRLTSQTNGLNV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M ++ +++ +++ D +IQ E+T LQ+++
Sbjct: 64 AMRNANDGISMAQTAEGAMQESTNMLHRMRDLALQSANGSNSDDDRAAIQKEVTALQTEM 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA ++F G+N L G+ I + + + ++ +
Sbjct: 124 TRIADTTTFGGQNLLDGSFGTKEFQIGANANETIGVSLSDISSDAIGNFAAGGSAGKIFG 183
Query: 180 STDGTERYGLLDRNHKIKVE-------------PQVLKDIDVSVYDASGTISTKKFKLAT 226
L + + V +T +
Sbjct: 184 KGVQKSGAALDFAKVGATNKELKLDGPNGKETLTFAGNEKLTEVVSEINKANTGIKASTS 243
Query: 227 TSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD 286
+ A+ + + S + A +
Sbjct: 244 VTTTIGNLASTETGKLVIGKDEFDLSKYKGDSKKLAEDLGKSGYSAEVADDGSTINLTAK 303
Query: 287 IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI 346
+ + + S + + +
Sbjct: 304 DVDGIKVTGAAKDGVELGGQKAGAANDNIVADAQIKLSSSSNFKVGGALADDLTDSATGS 363
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ + ID I + +G++ +R + + + + + V
Sbjct: 364 LNSVKDIDLTTVDGSQNALDVIDAAIAGIDSQRADLGAVQNRFNHTLNNLSNINENVNAS 423
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R+ D D A E+T ++ Q QQ + L+ LSL
Sbjct: 424 NSRIKDVDFAKETTNMTKNQILQQASTSILAQAKQIPQSALSLL 467
>gi|38050163|gb|AAR10700.1| phase 1 flagellin [Salmonella enterica]
Length = 421
Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats.
Identities = 74/452 (16%), Positives = 132/452 (29%), Gaps = 37/452 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSDSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A I +D +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKG----- 178
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+K ++ D V D + K +
Sbjct: 179 ------------IATTVKEGTKLTADFAVKDADFDDKSTGTKVTANLELKQDKSGNYFAY 226
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D+ A T+ + + + I T S+
Sbjct: 227 DKTASKYYDATVDTATGKIEFTSGTGKETTKDTSKLTDVTSLSKEVTIDSGLTDDKSLVK 286
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G V + Y +
Sbjct: 287 YKGDNGKEQYAVQTLDNKGNAT-----------------YKTAVIARDGKVTEGTAVALA 329
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 330 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 389
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 390 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 421
>gi|116489774|gb|ABJ98794.1| phase I flagellin middle domain variant C48 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 469
Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats.
Identities = 73/466 (15%), Positives = 141/466 (30%), Gaps = 17/466 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTA--------------SIAKSVIGSFIRDDNGKVQITT 165
++ + FNG L D + I +G + K +++
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+ + + T + + LK D + + T
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
+ N A G + A A + + + +
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATATGTASVVKMSYTDNNGKTIDGGLAVKVG 303
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
D + AT + T T + + S +
Sbjct: 304 DDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGH 363
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ A E + ID + +G++ +R + + + +
Sbjct: 364 NFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTS 423
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 ARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 469
>gi|16901492|gb|AAL30164.1|AF345847_1 flagellin [Escherichia coli]
Length = 498
Score = 227 bits (577), Expect = 3e-57, Method: Composition-based stats.
Identities = 73/495 (14%), Positives = 146/495 (29%), Gaps = 45/495 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + I+ SIQSEI Q S++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRIRELSVQATNGTNSDSDLTSIQSEIQQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L +D + A I+ + + + L +
Sbjct: 124 DRVSGQTQFNGVKVLASDQDMTIQVGANDGETITIKLQEINSDTLGLSGFGIKDPTKLKA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+T T +G + + + ++
Sbjct: 184 ATAETTYFGSTVKLADANTLDADITATVKGTTTPGQRDGNIMSDANGKLYVKVAGSDKPA 243
Query: 240 DQAKGIATIPV------------------------------------------PLPAAPA 257
+ T+ A +
Sbjct: 244 ENGYYEVTVEDDPTSPDAGKLKLGALAGTQPQAGNLKEVTTVKGKGAIDVQLGTDTATAS 303
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ S I K S + + V + +
Sbjct: 304 ITGAKLFKLEDANGKDTGSFALIGDDGKQYAANVDQKTGAVSVKTMSYTDADGVKHDNVK 363
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
V+ + + + + + ++ A E+ ++ ID + +
Sbjct: 364 VELGGSDGKTEVVTATDGKTYSVSDLQGKSLKTDSIAAISTQKTEDPLAAIDKALSQVDS 423
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G+I +R + + + R+ DAD A+E + +S Q QQ L+
Sbjct: 424 LRSNLGAIQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLA 483
Query: 438 IVNNSTARILSLFRG 452
N +T +LSL +G
Sbjct: 484 QANQTTQNVLSLLQG 498
>gi|38050155|gb|AAR10696.1| phase 1 flagellin [Salmonella enterica]
Length = 421
Score = 227 bits (577), Expect = 4e-57, Method: Composition-based stats.
Identities = 78/452 (17%), Positives = 134/452 (29%), Gaps = 37/452 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSDSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A I +D +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKG----- 178
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+K ++ D V V D +T K F
Sbjct: 179 ------------IATTVKEGTKLTADFAVKVADFDDQATTGKLTADLELKQDKSGNYFAF 226
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D A A T+ + + + I T S+
Sbjct: 227 DTANSKYYDATVDAATGKIEFTSGAGKETTKDTSKLTDVTSLSKEVTIDSGLTDDKSLVK 286
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G V + Y +
Sbjct: 287 YKGDDGKEQYAVQTLDNKGNAT-----------------YKTAVIARDGKVTEGTAVALA 329
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 330 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 389
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 390 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 421
>gi|38050277|gb|AAR10757.1| phase 1 flagellin [Salmonella enterica]
gi|38050279|gb|AAR10758.1| phase 1 flagellin [Salmonella enterica]
gi|38050281|gb|AAR10759.1| phase 1 flagellin [Salmonella enterica]
Length = 422
Score = 227 bits (577), Expect = 4e-57, Method: Composition-based stats.
Identities = 73/452 (16%), Positives = 146/452 (32%), Gaps = 36/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A I +D + +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKGIATTV 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S+ + + + K
Sbjct: 184 SSGASVVGDVKIAAADFDNAKATGGPAADKLSLTKDDKGNYFVK---------------- 227
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + T ++++
Sbjct: 228 -----------------DDTAAAKYYAATVDTTTGKISFDSDKDVTASAGTPTAVSTLSR 270
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + + Y D + L + + L K+ ++ + VT +
Sbjct: 271 EVKFDGADLKADQSLVKYKDDKGKDLYAIQTLDKDGNASFKSVTFSSDGKTTEGTAVALA 330
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 331 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 390
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 391 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 422
>gi|38050275|gb|AAR10756.1| phase 1 flagellin [Salmonella enterica]
gi|38050285|gb|AAR10761.1| phase 1 flagellin [Salmonella enterica]
Length = 422
Score = 227 bits (577), Expect = 4e-57, Method: Composition-based stats.
Identities = 69/452 (15%), Positives = 135/452 (29%), Gaps = 36/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A +D + +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGET----------------ITIDLQKIDKTE 167
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
V + + + + K
Sbjct: 168 LGLDKLDVTKGIATTVSSGASVVGDVKIAAADFDNAKTTGGPAADKLSLTKDDKGNYFVK 227
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D + + S + + ++ T + S+
Sbjct: 228 DVTATAKYYAATVDMTTGKISFDSDKDVTAAAGTPSAVTTLSREVKFDGADLKADQSLVK 287
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + ++ D + +
Sbjct: 288 YKDDKGKDLYAIQTLDKDGNATFKSVTFAADGKTTEGTAVDLA----------------- 330
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 331 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 390
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 391 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 422
>gi|38050175|gb|AAR10706.1| phase 1 flagellin [Salmonella enterica]
Length = 422
Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats.
Identities = 69/452 (15%), Positives = 136/452 (30%), Gaps = 36/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A +D + +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGET----------------ITIDLQKIDKTE 167
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
V + + + + K
Sbjct: 168 LGLDKLDVTKGIATTVSSGASVVGDVKIAAADFDNAKTTGGPAADKLSLTKDDKGNYFVK 227
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D + + S + + ++ T + S+
Sbjct: 228 DVTATAKYYAATVDTTTGKISFDSDKDVTAAAGTPSAVTTLSREVKFDGADLKADQSLVK 287
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + ++ D + ++
Sbjct: 288 YKDDKGKDLYAIQTLDKDGNATFKSVTFAADGKTTEGTAVALA----------------- 330
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 331 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 390
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 391 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 422
>gi|116489790|gb|ABJ98802.1| phase I flagellin middle domain variant C61 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 460
Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats.
Identities = 73/457 (15%), Positives = 135/457 (29%), Gaps = 8/457 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ-----ITTIDYYLDPET 174
++ + FNG L D + A I Q +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ L + K D + + K + T +G K
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
+ L AA + + + + D + AT
Sbjct: 244 GYYEQVANADLTEAKAALTAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQN 303
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA 354
+ T T + + S + + A
Sbjct: 304 KDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLA 363
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
E + ID + +G++ +R + + + + R+ D+D
Sbjct: 364 EAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSD 423
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 YATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 460
>gi|116489784|gb|ABJ98799.1| phase I flagellin middle domain variant C4 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 462
Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats.
Identities = 76/459 (16%), Positives = 137/459 (29%), Gaps = 10/459 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ-------ITTIDYYLDP 172
++ + FNG L D + A I Q Y +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ D T + ID + T T
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT 292
+ D+ G T+ L AA + + + + D + AT
Sbjct: 244 GYYEVSVDKTNGEVTLAGALTAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGDDYYSAT 303
Query: 293 TKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANT 352
+ T T + + S + +
Sbjct: 304 QNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPD 363
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
A E + ID + +G++ +R + + + + R+ D
Sbjct: 364 LAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIED 423
Query: 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 SDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 462
>gi|299536004|ref|ZP_07049323.1| flagellin domain protein [Lysinibacillus fusiformis ZC1]
gi|298728609|gb|EFI69165.1| flagellin domain protein [Lysinibacillus fusiformis ZC1]
Length = 418
Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats.
Identities = 59/450 (13%), Positives = 138/450 (30%), Gaps = 38/450 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + L N +++SSG +++ A D+AA +I++ M+ L
Sbjct: 3 IQHNISALNAHRNLGFNNTQASKNLEKLSSGFKINRAGDDAAGLAISEKMRGQIRGLDMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ S + A+ +++ ++ ++ D +IQ EITQL +L
Sbjct: 63 TKNSQDAISLIQTAEGALNETHSILQRMRELSVQSSSDTNVNLDRDAIQQEITQLTEELD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L + A + D + ++++
Sbjct: 123 RISETTEFNTQKLLDGSFSGTFQIGANEGQELKMDIDKMGAAALGLVNTTTLGKDAVNTT 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T+ G N K ++ +
Sbjct: 183 TNSNLADGTYKINTA-----------------------------------GTKLLDSKGN 207
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ +A + T + + ++ + + + + + D
Sbjct: 208 EVGNVAAGVITANNGATYKFTNATGLTGGTLTIKDGKGTAQTTLNSVSSKLSAGKYEIVD 267
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T + + + + + + + N + + +
Sbjct: 268 GKVVKDNKIVGEVTTTAGTYKIKVGNEDVEFKNTDLNLAAALADGTSFEINGVSVSTREQ 327
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ID + + +G++ +R+ + + + + R+ D DMA E
Sbjct: 328 ASGTITKIDDALTKVSEQRSALGAVQNRLEHTINNLGAASENLTAAESRIRDTDMAKEMM 387
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ Q A L+ N +L L
Sbjct: 388 EFTKNNILMQAAQSMLAQANQQPQGVLQLL 417
>gi|121997308|ref|YP_001002095.1| flagellin domain-containing protein [Halorhodospira halophila SL1]
gi|121588713|gb|ABM61293.1| flagellin domain protein [Halorhodospira halophila SL1]
Length = 492
Score = 226 bits (574), Expect = 7e-57, Method: Composition-based stats.
Identities = 63/488 (12%), Positives = 138/488 (28%), Gaps = 39/488 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++++A + L + EV +R+SSGLR++ A D+AA +I++ +
Sbjct: 4 VINTNVASLNAQRHLNSSRGDQEVALERLSSGLRINSARDDAAGLAISERFTGQINGMDQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
+ G S A+ M + +++ ++ D ++ E+ ++
Sbjct: 64 AARNANDGISFAQTAEGAMEEMSNLLQRVRELAVQSANDTNSPSDRAALDREVQAAVQEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQIT--------------- 164
IA + FN +N L L + + +
Sbjct: 124 GRIAESTQFNQQNVLNGTLRELVFQVGPNRGQTINAGGVDVRAENLGANVAEGRAVHQTA 183
Query: 165 -----TIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
+ L +D + N + D + A
Sbjct: 184 GGEGVQLPSGLQVNGQEIDLGDARELNDVASEINERQAETGVSAMRADRAETQAVEFDGL 243
Query: 220 KKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ + A + V A+ +G +G S +
Sbjct: 244 AEGERAQLRINDHAIELDGDMEDMSDFAARVNDQASETGVRLENGENGWSFVSNSDFELE 303
Query: 280 IRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID--- 336
+++ + + + + TE L + D
Sbjct: 304 YISDDAEGALSVGGTTVGQGLDRTDEESTGLIVERGITLSTEIGGELRVDPLEGDDDADL 363
Query: 337 -------------SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+ + + + +D ++ +G
Sbjct: 364 GAIGLKNWQPGGDYEDLQAEAYTVGGVDPVDVRTRETASDTIVAVDFALQQINNTRADLG 423
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
+I SR + + + + + R++DAD A E+ ++ Q QQ L N
Sbjct: 424 AIQSRFDATINNLNISSENLSASRSRILDADFAEETAEMTRTQILQQAGTSVLGQANEIP 483
Query: 444 ARILSLFR 451
++ L +
Sbjct: 484 QQVAQLLQ 491
>gi|116489782|gb|ABJ98798.1| phase I flagellin middle domain variant C35 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 463
Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats.
Identities = 69/460 (15%), Positives = 136/460 (29%), Gaps = 11/460 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + + G + + +
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A T +G +G+ S + + ++
Sbjct: 244 GYYEVSVDKTNGEVTLAGAALTAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGDDYYSA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
S T T L+ + + A + +
Sbjct: 304 TQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQP 363
Query: 360 AMEEM--------VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ E + ID + +G++ +R + + + + R+
Sbjct: 364 DLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIE 423
Query: 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 DSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 463
>gi|308054807|gb|ADO01450.1| flagellin [Salmonella enterica subsp. houtenae]
Length = 422
Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats.
Identities = 69/452 (15%), Positives = 136/452 (30%), Gaps = 36/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A +D + +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGET----------------ITIDLQKIDKTE 167
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
V + + + + K
Sbjct: 168 LGLDKLDVTKGIATTVSSGASVVGDVKIAAADFDNAKTTGAPAADKLSLTKDDKGNYFVK 227
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D + + S + + ++ T + S+
Sbjct: 228 DVTATAKYYAATVDTTTGKISFDSDKDVTATAGSPSAVTTLSREVKFDGADLKADQSLVK 287
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + ++ D + ++
Sbjct: 288 YKDDKGKDLYAIQTLDKDGNATFKSVTFAADGKTTEGTAVALA----------------- 330
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 331 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 390
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 391 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 422
>gi|116489770|gb|ABJ98792.1| phase I flagellin middle domain variant C182 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 470
Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats.
Identities = 75/467 (16%), Positives = 141/467 (30%), Gaps = 18/467 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDRN---------------HKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
+ Y K++ + D Y A T++ K
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 225 ATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGN 284
+ K + + L AA + + + +
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLKAALTAAGVTGTASVVKMSYTDNNGKTIDGGLAVKV 303
Query: 285 SDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTL 344
D + AT + T T + + S
Sbjct: 304 GDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEG 363
Query: 345 NITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVE 404
+ + A E + ID + +G++ +R + + + +
Sbjct: 364 HNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLT 423
Query: 405 KGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 SARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 470
>gi|16901494|gb|AAL30165.1|AF345848_1 flagellin [Escherichia coli]
Length = 487
Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats.
Identities = 68/484 (14%), Positives = 131/484 (27%), Gaps = 34/484 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ ++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR------------------------ 155
++ + FNG L + A I
Sbjct: 124 DRVSEQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATG 183
Query: 156 -------DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
G V + + + K
Sbjct: 184 SDLISKFKATGTDNYQINGTDNYTVNVDSGAVQNEDGDAIFVSATDGSLTTKSDTKVGGT 243
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + + A + T + +
Sbjct: 244 GIDATGLAKAAVSLAKDASIKYQGITFTNKGTDAFDGSGNGTLTANIDGKDVTFTIDATG 303
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
K ++ S + + T+ N+ + + D +
Sbjct: 304 KDATLKTSDPVYKNSAGQFTTTKVENKAATASDLDLNNAKKVGSSLVGNGADYEVSADGK 363
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
S DA + + ID + +G++ +R
Sbjct: 364 TVTGLGKTMYLSKSEGGSPILVKEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGAVQNR 423
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + R+ DAD A+E + +S Q QQ L+ N +T +LS
Sbjct: 424 FDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQTTQNVLS 483
Query: 449 LFRG 452
L +G
Sbjct: 484 LLQG 487
>gi|222529649|ref|YP_002573531.1| flagellin domain-containing protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222456496|gb|ACM60758.1| flagellin domain protein [Caldicellulosiruptor bescii DSM 6725]
Length = 420
Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats.
Identities = 63/451 (13%), Positives = 134/451 (29%), Gaps = 36/451 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++ +L + NL +++SSG+R++ A D+AA +I++ M++ L
Sbjct: 3 INNNIQALNTYNRLTINSNNLSKSLEKLSSGMRINRAGDDAAGLAISEKMRAQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ S + A+ G+++ ++ ++ D +I EI QL +L
Sbjct: 63 TRNAQDAISLIQTAEGGLNEVHSILQRMRELAVQAANDTNVEQDRSAISDEINQLIQELD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L I + + + + + + +++
Sbjct: 123 RISSTTEFNTQKLLDGTFS-GKFQIGANEGQTLQLNISKINSASLGLASSIEVETVNNAN 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ G+ + + K + T+ A D
Sbjct: 182 AGNLIKDGVYTVDSSNNLIDAAGKIVGTVSGMTITLADGTTTVSFTSENITTGAIIRVSD 241
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + S S + +
Sbjct: 242 NGNTFTMEKTVVSGQTNDKLAAGTYTISGSDVLKDNVK---------------------- 279
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+G T+ LD + + + T +
Sbjct: 280 ----------IGTVDTTTKTKINLLDGTSIDLAIVFGKTANLADGDTFVIKGVNVSNNFL 329
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
V+ ID ++ + K+G+ +R+ + + + R+ D DMA E
Sbjct: 330 ASGSVTAIDKALELVSKERAKLGAYQNRLEHTITNLSTSSENLTAAESRIRDVDMAKEMM 389
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q A L+ N +L L R
Sbjct: 390 NYTKNNILMQAATAMLAQANQLPQAVLQLLR 420
>gi|116489802|gb|ABJ98808.1| phase I flagellin middle domain variant C88 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 449
Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats.
Identities = 74/452 (16%), Positives = 141/452 (31%), Gaps = 9/452 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A D QI + LD V
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGAN----DGETIDIDLKQINSQTLGLDTLNVQQKY 179
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T + I ++ K + I TT + K
Sbjct: 180 KVSDTAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGG 239
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + V + + + +++G+ SI+
Sbjct: 240 TGKDGYYEVSVTAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISI 299
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + K + + + +A
Sbjct: 300 NTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAAT-- 357
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
E + ID + +G++ +R + + + + R+ D+D A+E
Sbjct: 358 TTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEV 417
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 418 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 449
>gi|116489766|gb|ABJ98790.1| phase I flagellin middle domain variant C118 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 473
Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats.
Identities = 70/470 (14%), Positives = 138/470 (29%), Gaps = 21/470 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG--------SFIRDDNGKVQITTIDYYLD 171
++ + FNG L D + A + + + D
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ + + + K +D + K + +G
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
+ + T+ + + SV + G + A
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEGVTGTASVVKMSYTDNNGKTIDGGLA 303
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE----------IDSGYSM 341
+ T Y D ++ K + S
Sbjct: 304 VKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASK 363
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ + A E + ID + +G++ +R + + +
Sbjct: 364 AEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVN 423
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ R+ D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 NLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 473
>gi|116489804|gb|ABJ98809.1| phase I flagellin middle domain variant C167 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 448
Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats.
Identities = 68/452 (15%), Positives = 132/452 (29%), Gaps = 10/452 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + + G + + +
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + V A+ + T + +A T +
Sbjct: 244 GYYEALTAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGDDYYSA-------TQNKDGSI 296
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T T + + S + + A
Sbjct: 297 SINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAAT 356
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
E + ID + +G++ +R + + + + R+ D+D A+E
Sbjct: 357 TTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEV 416
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 417 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 448
>gi|113911603|gb|ABI48283.1| Fla2 flagellin [Lachnospiraceae bacterium A4]
Length = 460
Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats.
Identities = 71/458 (15%), Positives = 148/458 (32%), Gaps = 10/458 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N AM++++ L +L +++SSG +V+ AAD+AA SI++ M+ LS
Sbjct: 2 VVQHNLRAMNSNRMLGITQGSLNKSTEKLSSGYKVNRAADDAAGLSISEKMRKQIRGLSQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQL 119
S G S V A+ +++ D++ + G +D ++IQ E+ QL +++
Sbjct: 62 ASLNAEDGISAVQTAEGALTEVHDMLQRMNELAVKAANGTNSTSDRQTIQDEVDQLLTEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FN L+ D T ++ G G T L ++ +
Sbjct: 122 DRVAETTKFNELYTLKGDEDKVTRYLSAHDAGIEGTLTQGATNATFSMDQLKFGDTIMIA 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + I ++ + + + + T + + L A T
Sbjct: 182 GREYHISGTQKQQGEIITSSVKIGQQVTIDGIMYTCTATVSNADKFELTKDDLIAKLDTS 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A T + G+ +G +
Sbjct: 242 SLSIMSVNGKTYYGAGITDDRTVVSSIGAYKLIQKELGLASSIGADGSTQASVNAGVDGK 301
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI-------TRHANT 352
+ V + +D + + D +
Sbjct: 302 TLKKPSFEGKWVFSIDKGSVQVREDIDFSLHVGADADMNNKIAVKIGALDTKGLGIQGLN 361
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
A + I + +A +G++ +R+ + + + + ++ D
Sbjct: 362 VKDTTGAAATYAIDSIADAVARISAQRSLLGAVQNRLEHTINNLDNVVENTTAAESQIRD 421
Query: 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
DMA+E + S Q L+ N + +LSL
Sbjct: 422 TDMATEMVKYSNNNVLAQAGQSMLAQSNQANQGVLSLL 459
>gi|193066370|ref|ZP_03047418.1| FliC [Escherichia coli E22]
gi|194429949|ref|ZP_03062459.1| FliC [Escherichia coli B171]
gi|260844327|ref|YP_003222105.1| flagellin [Escherichia coli O103:H2 str. 12009]
gi|192925955|gb|EDV80601.1| FliC [Escherichia coli E22]
gi|194412038|gb|EDX28350.1| FliC [Escherichia coli B171]
gi|257759474|dbj|BAI30971.1| flagellin [Escherichia coli O103:H2 str. 12009]
gi|323158593|gb|EFZ44607.1| fliC [Escherichia coli E128010]
Length = 497
Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats.
Identities = 73/494 (14%), Positives = 145/494 (29%), Gaps = 45/494 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + I+ SIQSEI Q S++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRIRELSVQATNGTNSDSDLTSIQSEIQQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L +D + A I+ + + + L +
Sbjct: 124 DRVSGQTQFNGVKVLASDQDMTIQVGANDGETITIKLQEINSDTLGLSGFGIKDPTKLKA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+T T +G + + + ++
Sbjct: 184 ATAETTYFGSTVKLADANTLDADITATVKGTTTPGQRDGNIMSDANGKLYVKVAGSDKPA 243
Query: 240 DQAKGIATIPV------------------------------------------PLPAAPA 257
+ T+ A +
Sbjct: 244 ENGYYEVTVEDDPTSPDAGKLKLGALAGTQPQAGNLKEVTTVKGKGAIDVQLGTDTATAS 303
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ S I K S + + V + +
Sbjct: 304 ITGAKLFKLEDANGKDTGSFALIGDDGKQYAANVDQKTGAVSVKTMSYTDADGVKHDNVK 363
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
V+ + + + + + ++ A E+ ++ ID + +
Sbjct: 364 VELGGSDGKTEVVTATDGKTYSVSDLQGKSLKTDSIAAISTQKTEDPLAAIDKALSQVDS 423
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G+I +R + + + R+ DAD A+E + +S Q QQ L+
Sbjct: 424 LRSNLGAIQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLA 483
Query: 438 IVNNSTARILSLFR 451
N +T +LSL R
Sbjct: 484 QANQTTQNVLSLLR 497
>gi|288870658|ref|ZP_06114872.2| B-type flagellin [Clostridium hathewayi DSM 13479]
gi|288866371|gb|EFC98669.1| B-type flagellin [Clostridium hathewayi DSM 13479]
Length = 555
Score = 225 bits (571), Expect = 1e-56, Method: Composition-based stats.
Identities = 80/497 (16%), Positives = 149/497 (29%), Gaps = 49/497 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++++++L N + +++SSG R++ A D+AA +I++ M++ L A
Sbjct: 59 IQHNIMALNSNRQLGINNSAVARSLEKLSSGYRINRAGDDAAGLAISEKMRAQIKGLEAA 118
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT----DSKSIQSEITQLQSQL 119
+D S V A+ G+ + +++ + T D K++Q EI+ L+ ++
Sbjct: 119 TDNSQDAISLVQTAEGGLQEVHSMLNRMTELATKSANGTYTDDVDRKALQDEISALKDEI 178
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQIT--------------- 164
IA G+ FNG L +G+ +A +V
Sbjct: 179 NRIADGTDFNGIKLLDGTMGTGSAGKVDTVAAGVTATTMDAATKFTFSGPEGYAVKIQAA 238
Query: 165 ---------TIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASG 215
L S T E L RN K + + D
Sbjct: 239 EKNTASSAAWNGTTLTITLNGDKSKTYTQEDIDNLIRNASGKPKDAGVNIKLTVDRDFKL 298
Query: 216 TISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAA 275
T + +AA+ F A + T + + +
Sbjct: 299 GDDTGTGATSDIKTLTSEAASQAFAVDNTAGIKVTAKKAGLNNSSLTFKNTPADKVGGSI 358
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
+ N T+ T D + L
Sbjct: 359 TGAGAYEVNLVAATSYTSSEINKMLADAGIELQVDFEGTKTGADMAAAGTTGAFTLAGGT 418
Query: 336 DSG---------------------YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + + +S I T I
Sbjct: 419 GLPEGGGLKLQIGDTSDSYNQLELGIADMHVNALDLTSVDISTRDGAAAAMSKIKTAINT 478
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ + GK+G+I +R+ + + + + + R+ D DMA E + Q A
Sbjct: 479 VSTSRGKLGAIQNRLEHTINNLGVTTENITSAESRIRDVDMAKEMMNYTKNSVLVQSAQA 538
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +L L +
Sbjct: 539 MLAQANQQPQSVLQLLQ 555
>gi|116489808|gb|ABJ98811.1| phase I flagellin middle domain variant C89 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 446
Score = 225 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 65/452 (14%), Positives = 130/452 (28%), Gaps = 12/452 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + + G + + +
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + +G + +V Y + + T
Sbjct: 244 GYYEVSVGVTGTASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYT- 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + S + + A
Sbjct: 303 --------ADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAAT 354
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
E + ID + +G++ +R + + + + R+ D+D A+E
Sbjct: 355 TTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEV 414
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 415 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 446
>gi|22553056|emb|CAD42895.1| flagellin [Legionella pneumophila serogroup 1]
Length = 491
Score = 225 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 77/471 (16%), Positives = 155/471 (32%), Gaps = 23/471 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++++A + L ++ R+SSGLR++ A D+AA +I+Q M + ++
Sbjct: 4 VINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
G S +A+ M + +++ ++ + SIQSEI+QL+S+L
Sbjct: 64 AVRNANDGISLAQVAEGAMQETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAK-------------------SVIGSFIRDDNGK 160
IA+ + FNG+ L ++ + R+ +
Sbjct: 124 ERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFSIGSISVCFFYWWYCHGNRNRSSW 183
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
Y +S+ + + D + + + S
Sbjct: 184 CSSDRYYYRNWRRAATSINSSANFTGALNGQDASSAYAKAAAINDAGIGGLSVTASTSGT 243
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ A A A + +G S + + +
Sbjct: 244 QTVGAIGGTAGDTYNLTINGVAIYTNLNVATALTNSDLRDAINGVSNQTGVVASLNGGNM 303
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY-VDTESTTLDSRKDLPKEIDSGY 339
+ +D T++ G TV + +D+ + G
Sbjct: 304 TLTAADGRNITVTESGTGFTAGTDGLTVTGGAFDGALRGTLSISAVDTIAIGGTVANIGL 363
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
S T ++ + + + ID + + +G++ +R ++ +
Sbjct: 364 SANISKDTVGIDSLDVSTASGAQTAIKRIDAALNSVNSNRANMGALQNRFESTIANLQNV 423
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D + R+ DAD A+E L+ Q QQ L+ N+ +LSL
Sbjct: 424 SDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLL 474
>gi|33590252|gb|AAQ22687.1| flagellin [Escherichia coli]
Length = 503
Score = 225 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 74/500 (14%), Positives = 139/500 (27%), Gaps = 50/500 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + I+ SIQSEI Q S++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRIRELSVQATNGTNSDSDLISIQSEIQQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG--------------------SFIRDDNG 159
++ + FNG L +D + A
Sbjct: 124 DRVSGQTQFNGVKVLASDQDMTIQVGANDGETITIKLQEINSDTLGLSGFGIKDPTKLKA 183
Query: 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
TT D+ + + +
Sbjct: 184 AATETTSFGGTPITLKNADTLDTAIAAKAQGKTPGTSPKGKGEGGIVADAAGQLYVKVVG 243
Query: 220 KKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ T A + + A T T + T
Sbjct: 244 SDKTDENGYYEVTVNKDPTSPDAGTLTLGNKAVTQPQAKDLTDVTTVKGNDAAEVKLGTD 303
Query: 280 IRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD--------- 330
+ ++S D G VD ++ + +
Sbjct: 304 TATASITGAKLFKLEDSNGKDTGSFALIGNDGKQYAANVDQKTGAVSVKTMSYTDADGVK 363
Query: 331 ------------------LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ + + ++ A E+ ++ ID +
Sbjct: 364 HDNVKVELGGSDGKTEVVTATDGKTYSVSDLQGKSLKTDSIAAISTQKTEDPLAAIDKAL 423
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ +G+I +R + + + R+ DAD A+E + +S Q QQ
Sbjct: 424 SQVDSLRSNLGAIQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAG 483
Query: 433 VQALSIVNNSTARILSLFRG 452
L+ N +T +LSL +G
Sbjct: 484 TSVLAQANQTTQNVLSLLQG 503
>gi|116489806|gb|ABJ98810.1| phase I flagellin middle domain variant C9 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 448
Score = 224 bits (569), Expect = 3e-56, Method: Composition-based stats.
Identities = 68/452 (15%), Positives = 131/452 (28%), Gaps = 10/452 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + + G + + +
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ V A+ + T + +A T +
Sbjct: 244 GYKAALTAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGDDYYSA-------TQNKDGSI 296
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T T + + S + + A
Sbjct: 297 SINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAAT 356
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
E + ID + +G++ +R + + + + R+ D+D A+E
Sbjct: 357 TTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEV 416
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 417 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 448
>gi|23477612|gb|AAN34779.1| flagellin [Escherichia coli]
Length = 498
Score = 224 bits (569), Expect = 3e-56, Method: Composition-based stats.
Identities = 73/495 (14%), Positives = 146/495 (29%), Gaps = 45/495 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLNSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + I+ SIQSEI Q S++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRIRELSAQATNGTNSDSDLTSIQSEIQQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L +D + A I+ + + + L +
Sbjct: 124 DRVSGQTQFNGVKVLASDQDMTIQVGANDGETITIKLQEINSDTLGLSGFGIKDPTKLKA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+T T +G + + + ++
Sbjct: 184 ATAETTYFGSTVKLADANTLDADITATVKGTTTPGQRDGNIMSDANGKLYVKVAGSDKPA 243
Query: 240 DQAKGIATIPV------------------------------------------PLPAAPA 257
+ T+ A +
Sbjct: 244 ENGYYEVTVEDDPTSPDAGKLKLGALAGTQPQAGNLKEVTTVKGKGAIDVQLGTDTATAS 303
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ S I K S + + V + +
Sbjct: 304 ITGAKLFKLVDANGKDTGSFALIGDDGKQYAANVDQKTGAVSAKTMSYTDADGVKHDNVK 363
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
V+ + + + + + ++ A E+ ++ ID + +
Sbjct: 364 VELGGSDGKTEVVTATDGKTYSVSDLQGKSLKTDSIAAISTQKTEDPLAAIDKALSQVDS 423
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G+I +R + + + R+ DAD A+E + +S Q QQ L+
Sbjct: 424 LRSNLGAIQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLA 483
Query: 438 IVNNSTARILSLFRG 452
N +T +LSL +G
Sbjct: 484 QANQTTQNVLSLLQG 498
>gi|319764520|ref|YP_004128457.1| flagellin domain protein [Alicycliphilus denitrificans BC]
gi|317119081|gb|ADV01570.1| flagellin domain protein [Alicycliphilus denitrificans BC]
Length = 486
Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats.
Identities = 82/484 (16%), Positives = 153/484 (31%), Gaps = 34/484 (7%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I TN ++++A + L +L R+SSGLR++ A D+AA +I++ S L+
Sbjct: 3 STINTNVASLTAQRNLGVSQNSLNTSIQRLSSGLRINSAKDDAAGLAISERFTSQIRGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S A+ + + D++ ++ +D K+IQ+E+ QL S+
Sbjct: 63 QAVRNANDGISMAQTAEGALKASGDILQRVRELAVQSANATNSASDRKAIQAEVGQLLSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT------------- 165
L I+ + FNG+ L GS+T + + + T
Sbjct: 123 LDRISVTTEFNGQKLLDGSFGSATFQVGANANQTITATTGNFRTTTYGTNLAQSANQAAA 182
Query: 166 ------------------IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
+D + + ++
Sbjct: 183 ATAPASGAATVIVNGLQAKTVNVDAADTAAKIAAAVNAVADTTGVTASARNVTELKLTAF 242
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
+ T A A +A + + A A
Sbjct: 243 SGSFQLEVKGDDTTTASTITFNATDAKDLAGAVKAFNDVSSKTGITAKVNASGDGLLLIN 302
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
++ + + + A T S T + + +T V + S
Sbjct: 303 DSGANIDIANKSATAAFTMAALDAPTTASQTDGSLKFGAALTVAASTGTGVTRGTVEFSS 362
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
K S Y + NT + + + ID+ + G++ S
Sbjct: 363 DKGFSMGGTSAYVSAGASKLNSVNTIDVSTVEGSTKALKIIDSALAAVNGQRASFGALQS 422
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
R + ++ + + R+ DAD ASE+ LS Q QQ ++ N +L
Sbjct: 423 RFETAVNNLQTSSENMSASRSRIQDADFASETANLSRTQILQQAGTAMVAQANQLPQGVL 482
Query: 448 SLFR 451
SL R
Sbjct: 483 SLLR 486
>gi|302387809|ref|YP_003823631.1| flagellin domain protein [Clostridium saccharolyticum WM1]
gi|302198437|gb|ADL06008.1| flagellin domain protein [Clostridium saccharolyticum WM1]
Length = 426
Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats.
Identities = 63/452 (13%), Positives = 146/452 (32%), Gaps = 32/452 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A+++ ++L + N + +++SSG R++ A D+AA +I++ M++ L
Sbjct: 3 IQHNIAALNSYRQLGNNNNTVGKNLEKLSSGYRINRAGDDAAGLAISEKMRAQITGLETA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD----SKSIQSEITQLQSQL 119
G S V A+ +++ +++ + +++Q E+ L+S++
Sbjct: 63 QKNANDGISLVQTAEGALTEVHSMLNRMVELAGQSANGTYQNEVDRENLQKEVVSLKSEI 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA ++FNG L +G K + + V + + ++ D
Sbjct: 123 DRIADSTNFNGIKLLDGTMG-----SGKYKLNAGSLAIGSTVATNFVVTDIKGSSIDKDG 177
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T + L + ++ ++ + + ++ K A+ T
Sbjct: 178 LTFAFDVGALDANGTFTTAGASDVLNVKMTDKEGNVSVVNLKLTDIIKKADGTAMASNTA 237
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + + T + + + + + S
Sbjct: 238 IAAGDNVVLDLSAVGIGKIDLTATAAGPTANDLLKGLDVAGFVAPSAGAAI--------- 288
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T + S +T + +
Sbjct: 289 --------------TTGTTGSSLRLQIGDTSDTFNQISVSVGDMHVKALQIDTVDISTQS 334
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ V + I ++ G +G+I +R+ + + + + + R+ D DMA E
Sbjct: 335 GAADAVKKLKDAINSVSSTRGDLGAIQNRLEHTINNLSVTSENMTAAESRIRDVDMAKEM 394
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q + L+ N +L L R
Sbjct: 395 MTYTKNNILVQSSQAMLAQANQLPQGVLQLLR 426
>gi|23477614|gb|AAN34780.1| flagellin [Escherichia coli]
Length = 498
Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats.
Identities = 72/495 (14%), Positives = 144/495 (29%), Gaps = 45/495 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +I ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIPNRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + I+ SIQSEI Q S +
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRIRELSVQATNGTNSDSDLTSIQSEIQQRLSVI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L +D + A I+ + + + L +
Sbjct: 124 DRVSGQTQFNGVKVLASDQDMTVQVGANDGETITIKLQEINSDTLGLSGFGIKDPTKLKA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+T T +G + + + ++
Sbjct: 184 ATAETTYFGSTVKLADANTLDADITATVKGTTTPGQRDGNIMSDANGKLYVKVAGSDKPA 243
Query: 240 DQAKGIATIPV------------------------------------------PLPAAPA 257
+ T+ A +
Sbjct: 244 ENGYYEVTVEDDPTSPDAGKLKLGALAGTQPQAGNLKEVTTVKGKGAIDVQLGTDTATAS 303
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ S I K S + + V + +
Sbjct: 304 ITGAKLFKLEDANGKDTGSFALIGDDGKQYAANVDQKTGAVSVKTMSYTDADGVKHDNVK 363
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
V+ + + + + + ++ A E+ ++ ID + +
Sbjct: 364 VELGGSDGKTEVVTATDGKTYSVSDLQGKSLKTDSIAAISTQKTEDPLAAIDKALSQVDS 423
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G+I +R + + + R+ DAD A+E + +S Q QQ L+
Sbjct: 424 LRSNLGAIQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLA 483
Query: 438 IVNNSTARILSLFRG 452
N +T +LSL +G
Sbjct: 484 QANQTTQNVLSLLQG 498
>gi|291524947|emb|CBK90534.1| Flagellin and related hook-associated proteins [Eubacterium rectale
DSM 17629]
Length = 480
Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats.
Identities = 77/479 (16%), Positives = 145/479 (30%), Gaps = 30/479 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N A +A++ L +++SSG R++ AAD+AA SI++ M+ L
Sbjct: 2 VVQHNMQAANANRMLNVTTGQQAKSTEKLSSGYRINRAADDAAGLSISEKMRKQIRGLDK 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S V A+ +++ ++ + T TD +IQ EI+QL +++
Sbjct: 62 ASSNAEDGVSSVQTAEGALTEVHSMLQRMNELATQSANGTNSTTDRSAIQDEISQLTTEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FN L+ G+ + G +G T + +
Sbjct: 122 DRVAETTKFNETYLLKGGDGTKQEYMKGHDAGLKGTLTDGATTATFKVAAGALDAGKSVT 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G + V+ + V+V + T + K T G
Sbjct: 182 IGGKDYTIGTDKTEVQTAVDGLTAEGDQVTVNGKTYTYTKKGGTGKTDEGWVEGTTATEG 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS--------------------------- 272
T+ S S
Sbjct: 242 STLAYGKKGAANPLTIANGDKVTTTPKTGASASYTAAEMDNGVSKADPSIISAAKAVSLM 301
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
++G ++ V T + D G T + +
Sbjct: 302 TDELIAANKVGVTNGTVEITGNPAYDKDNGVTFNINKGSAEVANKLSFSLHVGSDADMTN 361
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
K +M + + + +A + I ++ + +G++ +R+
Sbjct: 362 KITVGIETMNSSYLGIKGLNVNDDSGIAGTYAIDAISDALQKVSDQRSSLGAVQNRLEHT 421
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D + + + R+ D DMA E S Q L+ N S +LSL +
Sbjct: 422 IDNLDNVVENTTSAESRIRDTDMAKEMVNYSKNNILAQAGQSMLAQANQSNQGVLSLLQ 480
>gi|160881968|ref|YP_001560936.1| flagellin domain-containing protein [Clostridium phytofermentans
ISDg]
gi|160430634|gb|ABX44197.1| flagellin domain protein [Clostridium phytofermentans ISDg]
Length = 502
Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats.
Identities = 82/499 (16%), Positives = 154/499 (30%), Gaps = 51/499 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ + +L+ N L+ +R+SSG R++ AAD+AA +I++ MK+ L
Sbjct: 3 INHNISALHGNNQLKINNNALDKSLERLSSGYRINRAADDAAGLAISRKMKTQIEGLEQS 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D +IQ EI L +++
Sbjct: 63 SRNASDGVSVIQTAEGALNEVNAMLQRMRELSVQAANGTNTAEDRLAIQKEINALNNEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY----------- 169
I+ + FN + L +L + S V + D+ I
Sbjct: 123 RISTDTEFNTKPLLNGNLDCQSYSNTSDVEMISLSDNVDAKDYNFIITGDARQAVMTGMQ 182
Query: 170 ------------------------LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
++ + ++ +V V D
Sbjct: 183 LGGLSDQIADDQAGVININGIEIKINAGDTMEQVFEKLRGACDTMNIKVFAQVGTSVNPD 242
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
D SG I T + D K + + A A T
Sbjct: 243 YDGFAGYESGPIDNGSLVFMTKEYGSNQTIEMHCDNDKLSGLLGISSGGAKAIGVDAKAT 302
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL 325
G+ S A ++ + K T T T V N + + +
Sbjct: 303 LGNGFSSTATASCSGNIITVTDGDGFEIKFKATPGAAKTAFTDQTVNNDGASITDGAGSD 362
Query: 326 DSRKDLPKEIDSGYSMVTLNITRH-------------ANTDAYNEKLAMEEMVSFIDTQI 372
+ + + + N + +S + I
Sbjct: 363 NVSITVLQAGPMDLQIGANEGQTMEVRIPRVDTYTLGTNIVNVCTQEGASSAISILSKAI 422
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
T K+G+ +R+ + + + + + + R+ D DMA E + + Q
Sbjct: 423 TMVTDIRAKLGAYQNRLEHAIANLDVGAENITEALSRIEDTDMAKEMSLFTQKNVLVQAG 482
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N ILSL +
Sbjct: 483 TAMLAQANQRPQNILSLLQ 501
>gi|218689916|ref|YP_002398128.1| Flagellin (Phase 1-C flagellin) [Escherichia coli ED1a]
gi|218427480|emb|CAR08376.2| Flagellin (Phase 1-C flagellin) [Escherichia coli ED1a]
Length = 486
Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats.
Identities = 68/483 (14%), Positives = 130/483 (26%), Gaps = 34/483 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ ++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR------------------------ 155
++ + FNG L + A I
Sbjct: 124 DRVSEQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATG 183
Query: 156 -------DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
G V + + + K
Sbjct: 184 SDLISKFKATGTDNYQINGTDNYTVNVDSGAVQNEDGDAIFVSATDGSLTTKSDTKVGGT 243
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + + A + T + +
Sbjct: 244 GIDATGLAKAAVSLAKDASIKYQGITFTNKGTDAFDGSGNGTLTANIDGKDVTFTIDATG 303
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
K ++ S + + T+ N+ + + D +
Sbjct: 304 KDATLKTSDPVYKNSAGQFTTTKVENKAATASDLDLNNAKKVGSSLVVNGADYEVSADGK 363
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
S DA + + ID + +G++ +R
Sbjct: 364 TVTGLGKTMYLSKSEGGSPILVKEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGAVQNR 423
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + R+ DAD A+E + +S Q QQ L+ N +T +LS
Sbjct: 424 FDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQTTQNVLS 483
Query: 449 LFR 451
L R
Sbjct: 484 LLR 486
>gi|46909475|gb|AAT06255.1| flagellin [uncultured bacterium]
Length = 459
Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats.
Identities = 67/458 (14%), Positives = 151/458 (32%), Gaps = 9/458 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N AM++++ L +L +++SSG +V+ AAD+AA SI++ M+ LS
Sbjct: 2 VVQHNLRAMNSNRMLGITQGSLNKSTEKLSSGYKVNRAADDAAGLSISEKMRKQIRGLSQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQL 119
S G S V A+ +++ D++ + G +D ++IQ E+ QL +++
Sbjct: 62 ASLNAEDGISAVQTAEGALTEVHDMLQRMNELAVKAANGTNSTSDRQTIQDEVDQLLTEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FN L+ D T ++ G G T L ++ +
Sbjct: 122 DRVAETTKFNELYTLKGDEDKVTRYLSAHDAGIEGTLTQGATNATFSMDQLKFGDTIMIA 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA------TTSGAWLK 233
+ ++ I ++ + + + + + + K
Sbjct: 182 GREYHISGTKAEQAAIITASVKIGQQVTIDGIMYTCSSVSNADKFELKSEDLIAKLDTSS 241
Query: 234 AANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATT 293
+ + + ++ + + A + + V T
Sbjct: 242 LSIMSVNGKTYYGAGITDDRTVVSSIGAYKLIQKELGLASSIGADGATQASVNAGVDGKT 301
Query: 294 KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD 353
+ + + S +D K ++ T +
Sbjct: 302 LMKPSFEGKWVFSIDKGSVQVREDIDFSLHVGADADMNNKIAVKIGALDTKGLGIQGLNV 361
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
A + I + +A +G++ +R+ + + + + ++ D
Sbjct: 362 KDTTGAAATYAIDSIADAVARISAQRSLLGAVQNRLEHTINNLDNVVENTTAAESQIRDT 421
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DMA+E + S Q L+ N + +L L +
Sbjct: 422 DMATEMVKYSNNNVLAQAGQSMLAQSNQANQGVLQLLQ 459
>gi|51342391|gb|AAU01391.1| phase 1 flagellin [Salmonella bongori]
Length = 499
Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats.
Identities = 72/496 (14%), Positives = 133/496 (26%), Gaps = 47/496 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + ++S
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKKYDVNS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G + + A +
Sbjct: 184 EVVTDGSGGKALNISGLDDAAIKTAVGGTPTGTGEIKDNKVYHNSTDGKYYVEVAGYTSG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A T T+ + + S T + +++
Sbjct: 244 ENGFYEVEANPTDGTVTFATGATKITAKPAGVEEVTTVQSKPVALSADVKTQLTNSGVST 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
V + D T N +
Sbjct: 304 ADADKGQLVTMSYTDKNGKTIDGGFGVKVGDDIYAATKNKDGSFSINTTKYTDKDGNTQT 363
Query: 360 A--------------------------------------------MEEMVSFIDTQIKCA 375
A E + ID +
Sbjct: 364 ALNKLGGVDGKTEVVSIEGKTYTAAKAKDHDFKAQPELAEAATATTENPLQKIDAALAQV 423
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 DALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSV 483
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 LAQANQVPQNVLSLLR 499
>gi|116489810|gb|ABJ98812.1| phase I flagellin middle domain variant C170 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 441
Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats.
Identities = 71/452 (15%), Positives = 131/452 (28%), Gaps = 17/452 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + G TID L
Sbjct: 124 DRVSGQTQFNGVKVLAQDNT--------------LTIQVGANDGETIDIDLKQINSQTLG 169
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + V I + + + G
Sbjct: 170 LDTLNVQQKYKVSDTAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGK 229
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
AK T + + + + T + + AT +
Sbjct: 230 YYAKVTVTGGTGKDGYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEYYSATQNKDGSI 289
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T T + + S + + A
Sbjct: 290 SINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAAT 349
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
E + ID + +G++ +R + + + + R+ D+D A+E
Sbjct: 350 TTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEV 409
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 410 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 441
>gi|116489760|gb|ABJ98787.1| phase I flagellin middle domain variant C115 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 477
Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats.
Identities = 74/474 (15%), Positives = 146/474 (30%), Gaps = 25/474 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTA--------------SIAKSVIGSFIRDDNGKVQITT 165
++ + FNG L D + I +G + K +++
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+ + + T + + LK D + + T
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
+ N A G + A A + +G +G+ S +
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVAAGVTGTASVVKMSYTDNNGKTID 303
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
+ ++ S T T L+ + +
Sbjct: 304 GGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTY 363
Query: 346 ITRHANTDAYNEKLAMEEM--------VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
A + + + E + ID + +G++ +R + +
Sbjct: 364 AASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLG 423
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R+ D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 NTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 477
>gi|330826736|ref|YP_004390039.1| flagellin domain-containing protein [Alicycliphilus denitrificans
K601]
gi|329312108|gb|AEB86523.1| flagellin domain protein [Alicycliphilus denitrificans K601]
Length = 486
Score = 223 bits (566), Expect = 6e-56, Method: Composition-based stats.
Identities = 82/484 (16%), Positives = 153/484 (31%), Gaps = 34/484 (7%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I TN ++++A + L +L R+SSGLR++ A D+AA +I++ S L+
Sbjct: 3 STINTNVASLTAQRNLGVSQNSLNTSIQRLSSGLRINSAKDDAAGLAISERFTSQIRGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S A+ + + D++ ++ +D K+IQ+E+ QL S+
Sbjct: 63 QAVRNANDGISMAQTAEGALKASGDILQRVRELSVQSANATNSASDRKAIQAEVGQLLSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT------------- 165
L I+ + FNG+ L GS+T + + + T
Sbjct: 123 LDRISVTTEFNGQKLLDGSFGSATFQVGANANQTITATTGNFRTTTYGTNLAQSANQAAA 182
Query: 166 ------------------IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
+D + + ++
Sbjct: 183 ATAPASGAATVIVNGLQAKTVNVDAADTAAKIAAAVNAVADTTGVTASARNVTELKLTAF 242
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
+ T A A +A + + A A
Sbjct: 243 SGSFQLEVKGDDTTTASTITFNATDAKDLAGAVKAFNDVSSKTGITAKVNASGDGLLLIN 302
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
++ + + + A T S T + + +T V + S
Sbjct: 303 DSGANIDIANKSATAAFTMAALDAPTTASQTDGSLKFGAALTVAASTGTGVTRGTVEFSS 362
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
K S Y + NT + + + ID+ + G++ S
Sbjct: 363 DKGFSMGGTSAYVSAGASKLNSVNTIDVSTVEGSTKALKIIDSALAAVNGQRASFGALQS 422
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
R + ++ + + R+ DAD ASE+ LS Q QQ ++ N +L
Sbjct: 423 RFETAVNNLQTSSENMSASRSRIQDADFASETANLSRTQILQQAGTAMVAQANQLPQGVL 482
Query: 448 SLFR 451
SL R
Sbjct: 483 SLLR 486
>gi|19910959|dbj|BAB87728.1| flagellin protein FliB(C) [Clostridium chauvoei]
Length = 413
Score = 223 bits (566), Expect = 6e-56, Method: Composition-based stats.
Identities = 73/451 (16%), Positives = 139/451 (30%), Gaps = 43/451 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++A + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNMNALNAHRNMMGNIATAGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +S+ ++ ++ D +IQ EI L ++
Sbjct: 63 SRNAQDGISLIQTAEGALSETHSILQRMRELSVQSANDTNVAVDRTAIQDEINSLTEEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L A S + N + E+ L +
Sbjct: 123 RISGDTEFNTQKLLDGGFKGEFQIGANSNQTVKLDIGNMSAASLGLTTTNSLESKALALN 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
++ + + + + + + F A +
Sbjct: 183 SNLADGSYKISGTNLVDTNGNTVGTFNSGAKKIVVNGQDTVFTKAALAD----------- 231
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A + V A T S S S T + + AT +T D
Sbjct: 232 ----GAVLTVKGGIADIKNTMTGAAKKLSSGSYEISGTNVIKDGKLVGTFATGAKKLTID 287
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ T D T+ N + +
Sbjct: 288 GVGDVTEAELGFITDQMKDGVKFTI-------------------------NGSDVSTREL 322
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ I++ I+ + K+G++ +R+ + + + + R+ D DMA E
Sbjct: 323 ASGSIKTINSAIEQVSTQRSKLGAVQNRLEHTINNLNTSSENLTAAESRVRDVDMAKEMM 382
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A L N +L L R
Sbjct: 383 AFSKNNILSQAAQAMLGQANQQPQGVLQLLR 413
>gi|116489812|gb|ABJ98813.1| phase I flagellin middle domain variant C37 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 440
Score = 222 bits (565), Expect = 7e-56, Method: Composition-based stats.
Identities = 69/452 (15%), Positives = 131/452 (28%), Gaps = 18/452 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y +T LK + T
Sbjct: 184 TAATVTGYADTTIALDNSTFKAS---------------ATGLGGTDQKIDGDLKFDDTTG 228
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + + D + AT +
Sbjct: 229 KYYAKVTVTGGTGKDGYYEVSVSVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSI 288
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T T + + S + + A
Sbjct: 289 SINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAAT 348
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
E + ID + +G++ +R + + + + R+ D+D A+E
Sbjct: 349 TTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEV 408
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 409 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 440
>gi|99645039|emb|CAJ77153.2| flagellin [Escherichia coli]
Length = 486
Score = 222 bits (565), Expect = 7e-56, Method: Composition-based stats.
Identities = 67/483 (13%), Positives = 131/483 (27%), Gaps = 34/483 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ ++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR------------------------ 155
++ + FNG L + A I
Sbjct: 124 DRVSEQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATG 183
Query: 156 -------DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
G V + + + K
Sbjct: 184 SDLISKFKATGTDNYQINGTDNYTVNVDSGAVQNEDGDAIFVSATDGSLTTKSDTKVGGT 243
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + + A ++ + T + +
Sbjct: 244 GIDATGLAKAAVSLAKDASIKYQGITFTNKGTGAFDGSSNGTLIANIDGKDVTFTIDATG 303
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
K ++ S + + T+ N+ + + D +
Sbjct: 304 KDATLKTSDPVYKNSAGQFTTTKVENKAATASDLDLNNAKKVGSSLVVNGADYEVSADGK 363
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
S DA + + ID + +G++ +R
Sbjct: 364 TVTGLGKTMYLSKSEGGSPILVKEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGAVQNR 423
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + R+ DAD A+E + +S Q QQ L+ N +T +LS
Sbjct: 424 FDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQTTQNVLS 483
Query: 449 LFR 451
L R
Sbjct: 484 LLR 486
>gi|114046847|ref|YP_737397.1| flagellin domain-containing protein [Shewanella sp. MR-7]
gi|113888289|gb|ABI42340.1| flagellin domain protein [Shewanella sp. MR-7]
Length = 467
Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats.
Identities = 74/464 (15%), Positives = 148/464 (31%), Gaps = 16/464 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +++ + + L N L+ +R+SSGLR++ A D+AA I+ + S L
Sbjct: 4 TVNTNVTSLGSQKNLNKANSALQTSMERLSSGLRINSAKDDAAGLQISNRLTSQINGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M + D++ +++ D ++Q EI+ LQ++L
Sbjct: 64 AQRNANDGISIAQTAEGAMQTSTDILQRMRDLSLQSANGSNSADDRAAMQKEISSLQTEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G+ L G+ + + + + + +L
Sbjct: 124 TRIADTTSFGGQKLLDGTYGTQKFQVGSNANETISISLGDVSSNKLGNNTISGAGSVLGV 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ T + IKV + + +
Sbjct: 184 AATDTLSNSVAFTAGDIKVNGKTVAVAAADTATSLADKINATGSGVKAEAKLSTTIEGLS 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G T+ A + +T S A Y ++D + +
Sbjct: 244 STDTGTLTVYDAEGNADSYDLSTYNGDAKTLASDLGKAGYDVSYDADTGKIGFSATGVQG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT------------ 347
V D +T + L +++
Sbjct: 304 IEISGGVVGGTVSLGGNVADDTNTNVSVASSLTLSSPDKFTVTDDGTADLGEILSGGTSE 363
Query: 348 -RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ N ++ +S ID I + +G++ +R++ + + + V
Sbjct: 364 LNKVSDIDINTAKGAQDAISVIDAAIAGIDSQRADLGAVQNRMNFTINNLSNISTNVSDA 423
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R+ D D A E+ +++ Q Q + L+ N LSL
Sbjct: 424 RSRVQDVDFAKETAQMTKQQILSQTSSAMLAQANQLPQVALSLL 467
>gi|10432585|dbj|BAB13814.1| flagellin [Clostridium chauvoei]
gi|19910957|dbj|BAB87726.1| flagellin protein FliA(C) [Clostridium chauvoei]
Length = 413
Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats.
Identities = 63/451 (13%), Positives = 138/451 (30%), Gaps = 43/451 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++A + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNMNALNAHRNMMGNIATAGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D +IQ EI L ++
Sbjct: 63 SRNAQDGISLIQTAEGALAETHSILQRMRELSVQSANDTNVAVDRTAIQDEINSLTEEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L A S + N + E+ L
Sbjct: 123 RISGDTEFNTQKLLDGGFKGEFQIGANSNQTVKLDIGNMSAASLGLTTTNSLESKALTKD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
++ + + + + + D + + F A + + +
Sbjct: 183 SNLADGTYKISGKNLVDTNGNSVGTFDAASKKITVNGKDTVFDKAALAENAVLTVKSGTA 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ K T ++ + + A ++ +
Sbjct: 243 EIKNTMTGAATKLSSGNYEIKGTNVIKDGKLAGTFDAAKKKLTIDGVGD----------- 291
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
E+ S + ++ N + +
Sbjct: 292 -----------------------------VSEAELGFQTSKMLDKVSFTINGSDVSTREL 322
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ I++ I+ + K+G++ +R+ + + + + R+ D DMA E
Sbjct: 323 ASGSIKTINSAIEQVSTQRSKLGAVQNRLEHTINNLNTSSENLTAAESRVRDVDMAKEMM 382
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A L N +L L R
Sbjct: 383 AFSKNNILSQAAQAMLGQANQQPQGVLQLLR 413
>gi|116489754|gb|ABJ98784.1| phase I flagellin middle domain variant C55 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 479
Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 76/476 (15%), Positives = 145/476 (30%), Gaps = 27/476 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTA--------------SIAKSVIGSFIRDDNGKVQITT 165
++ + FNG L D + I +G + K +++
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+ + + T + + LK D + + T
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
+ N A G + A A + + + SV + G +
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATEAKAALTAAGVTGTASVVKMSYTDNNGKT 303
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE----------I 335
A + T Y D ++ K +
Sbjct: 304 IDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGK 363
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
S + + A E + ID + +G++ +R +
Sbjct: 364 TYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITN 423
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + R+ D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 LGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 479
>gi|114046846|ref|YP_737396.1| flagellin domain-containing protein [Shewanella sp. MR-7]
gi|113888288|gb|ABI42339.1| flagellin domain protein [Shewanella sp. MR-7]
Length = 468
Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 73/464 (15%), Positives = 146/464 (31%), Gaps = 16/464 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +++ + + L N L+ +R+SSGLR++ A D+AA I+ + S L
Sbjct: 4 TVNTNVTSLKSQKNLNGANSALQTSMERLSSGLRINSAKDDAAGLQISNRLTSQINGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M + D++ +++ D ++Q E+ LQ++L
Sbjct: 64 AQRNANDGISIAQTAEGAMQTSTDILQRMRDLSLQSANGSNSTEDRAAMQKELAALQTEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G+ L G+ + + + + + +L
Sbjct: 124 TRIADTTSFGGQKLLDGTYGTQKFQVGANANETISVTLMDVSSNKLGNNTISGAGSVLGV 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ T + IKV + + +
Sbjct: 184 AATDTLSNSVAFTAGDIKVNGKTVAVAAADTATSLADKINATGSGVKAEAKLSTTIEGLS 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G T+ A + +T S A Y ++D + +
Sbjct: 244 STDTGTLTVYDAEGNADSYDLSTYNGDAKTLASDLGKAGYDVSYDADTGKIGFSATGVQG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT------------ 347
V D +T + L +++
Sbjct: 304 IEISGGVVGGTVSLGGNVADDTNTNVSVASSLTLSSPDKFTVTDDGTADLGEILSGGTSE 363
Query: 348 -RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ N ++ +S ID I ++ +G++ +R+ + + + V
Sbjct: 364 LNKVSDIDINTAEGAQDAISVIDAAIAGIDSSRSDLGAVQNRMSFTINNLNNISTNVSDA 423
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R+ D D A E+ ++ Q Q + L+ N LSL
Sbjct: 424 RSRIQDVDFAKETATMTKQQILSQTSSAMLAQANQIPQVALSLL 467
>gi|38050165|gb|AAR10701.1| phase 1 flagellin [Salmonella enterica]
gi|38050167|gb|AAR10702.1| phase 1 flagellin [Salmonella enterica]
Length = 499
Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 71/496 (14%), Positives = 133/496 (26%), Gaps = 47/496 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + ++S
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVNS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G + + A +
Sbjct: 184 EVVTDGSGGKALNISGLDDAAIKTAVGGTPTGTGEIKDNKVYHNSTDGKYYVEVAGYTSG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A T T+ + + S T + +++
Sbjct: 244 ENGFYEVEANPTDGTVTFATGATKITAKPAGVEEVTTVQSKPVALSADVKTQLTNSGVST 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
V + D T N +
Sbjct: 304 ADADKGQLVTMSYTDKNGKTIDGGFGVKVGDDIYAATKNKDGSFSINTTKYTDKDGNTQT 363
Query: 360 A--------------------------------------------MEEMVSFIDTQIKCA 375
A E + ID +
Sbjct: 364 ALNKLGGVDGKTEVVSIEGKTYTAAKAKDHDFKAQPELAEAATTTTENPLQKIDAALAQV 423
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 DALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSV 483
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 LAQANQVPQNVLSLLR 499
>gi|116489764|gb|ABJ98789.1| phase I flagellin middle domain variant C112 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 475
Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 76/472 (16%), Positives = 144/472 (30%), Gaps = 23/472 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR-----------DDNGKVQITTIDY 168
++ + FNG L D + A I D Q +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
T D++ + ++ D+
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
G + + + T + PL A T+ + V S T D
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGTEAKAALTAAGVTGTASVVKMSYTDNNGKTIDGG 303
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK---------EIDSGY 339
+ + S + +++ + D S T ++
Sbjct: 304 LAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAA 363
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
S + + A E + ID + +G++ +R + +
Sbjct: 364 SKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNT 423
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R+ D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 VNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 475
>gi|114319861|ref|YP_741544.1| flagellin domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226255|gb|ABI56054.1| flagellin domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 486
Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 59/483 (12%), Positives = 140/483 (28%), Gaps = 34/483 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++++A + L L V +R+SSGLR++ A D+AA +I++ + +
Sbjct: 4 VINTNIASLNAQRNLNASQNQLNVSLERLSSGLRINSAKDDAAGLAISERFTAQINGNNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S A+ + + ++ I+ +D +++ +E+ QL ++
Sbjct: 64 AVRNANDGISLSQTAEGALEEIGNIGQRIRELAVQAANDTNSASDRQALNNEVQQLIAEA 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA+ + FN +N L L + + + D + +
Sbjct: 124 GRIAQATQFNDQNVLDGSLEEILFQVGANRGQTISVDGVDARSDQLGAQLFAGDDIDFTE 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
D D+ +
Sbjct: 184 LVDNANATTASFNITDDLTINGEAVDLSGIEAEDGFADVDDIVAAINAVSGDTGVEADRA 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGN--------------- 284
+ + + + +G + + + + R+ +
Sbjct: 244 LEVEATIDASGHTASNTGLAFSLNGVDITVDGTASQTEAATRLADAINEAGVSGVSAQID 303
Query: 285 ----------------SDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + + G T
Sbjct: 304 PDDDTQVVLSGDGADLQFTQGADSQGITFVDGADLGANEDDIAGFARAIELTGQLGESVD 363
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ G + + + + + + + +D + + +G++ +R
Sbjct: 364 VQGTDVGNLGLDNLGDGEEKTLASVDISTRDNASDAIRSMDFVLAQVNSLRADLGAVQNR 423
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + +E R++DAD A+E+ L+ Q QQ L+ N +L+
Sbjct: 424 FESTVANLSVTSENLEASRSRILDADFAAETAALTRSQILQQAGTSVLAQANQLPNNVLA 483
Query: 449 LFR 451
L +
Sbjct: 484 LLQ 486
>gi|38050099|gb|AAR10668.1| phase 1 flagellin [Salmonella enterica]
Length = 481
Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 75/478 (15%), Positives = 150/478 (31%), Gaps = 29/478 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------------------IRDDNGK 160
++ + FNG L D + A + D
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ + + + D + K+ V A T
Sbjct: 184 EAVKSGGGATNGTAAIKDGKVFFDATDNKYFIEVEGLTAGDATKNGVYEVSVADDGTVTM 243
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
T G A T Q K +A + + + + + +++ +
Sbjct: 244 PTTTKVTGGMPATATAVTETQPKPVALSTAVKDQLTDSGISAADAAKGQLVTMSYTDKNG 303
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+ + V+ + + ++ T +T++ K
Sbjct: 304 KTIDGGFGVKVGANIYAATKNKDGSFSINTTEYTDKGGNTKTALNQLGGADGKTEVVSID 363
Query: 341 MVTLNITRHANTDA-------YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
T N ++ A + E ++ ID + A +G++ +R +
Sbjct: 364 GKTYNASKAAGHNFKAQPELAEAAATTTENPLAKIDAALAQVDALRSDLGAVQNRFNSAI 423
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + R+ D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 TNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 481
>gi|116489768|gb|ABJ98791.1| phase I flagellin middle domain variant C42 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 473
Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 69/470 (14%), Positives = 133/470 (28%), Gaps = 21/470 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + + G + + +
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 240 DQ------------------AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR 281
+ L AA + + +
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTEAKAALTAAGVTGTASVVKMSYTDNNGKTIDGGLA 303
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
+ D + AT + T T + + S
Sbjct: 304 VKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASK 363
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ + A E + ID + +G++ +R + + +
Sbjct: 364 AEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVN 423
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ R+ D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 NLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 473
>gi|22553060|emb|CAD42897.1| flagellin [Legionella pneumophila serogroup 6]
Length = 476
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 77/471 (16%), Positives = 157/471 (33%), Gaps = 23/471 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++++A + L ++ R+SSGLR++ A D+AA +I+Q M + ++
Sbjct: 4 VINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
G S +A+ M + +++ ++ + SIQSEI+QL+S+L
Sbjct: 64 AVRNANDGISLSQVAEGAMQETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAK-------------------SVIGSFIRDDNGK 160
IA+ + FNG+ L ++ + R+ +
Sbjct: 124 ERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFSIGRQHKSFFYWWYCHGNRNRSSW 183
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+I + +S+ + + D + + + S
Sbjct: 184 CSSDSITIAIGGGAATSINSSANFTGALNGQDATSAYAKAAAINDAGIGGLSVTASTSGT 243
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ A A A + +G S + + +
Sbjct: 244 QAVGAIGGTAGDTYNLTINGVAIYTNLNVATALTNSDLRDAINGVSNQTGVVASLNGGNM 303
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY-VDTESTTLDSRKDLPKEIDSGY 339
+ +D T++ G TV + +D+ + G
Sbjct: 304 TLTAADGRNITVTESGTGFTAGTDGLTVTGGAFDGALRGTLSISAVDTIAIGGTVANIGL 363
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
S T ++ + + + ID + + +G++ +R ++ +
Sbjct: 364 SANISKDTVGIDSLDVSTASGAQTAIKRIDAALNSVNSNRANMGALQNRFESTIANLQNV 423
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D + R+ DAD A+E L+ Q QQ L+ N+ +LSL
Sbjct: 424 SDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLL 474
>gi|256022419|ref|ZP_05436284.1| flagellin [Escherichia sp. 4_1_40B]
Length = 497
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 72/494 (14%), Positives = 145/494 (29%), Gaps = 45/494 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SS LR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSSLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + I+ SIQSEI Q S++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRIRELSVQATNGTNSDSDLTSIQSEIQQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L +D + A I+ + + + L +
Sbjct: 124 DRVSGQTQFNGVKVLASDQDMTIQVGANDGETITIKLQEINSDTLGLSGFGIKDPTKLKA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+T T +G + + + ++ +
Sbjct: 184 ATAETTYFGSTVKLADANTLDADITATVKGTTTPGKRDGNIMSDANGKLYVKVAGSDKSP 243
Query: 240 DQAKGIATIPV------------------------------------------PLPAAPA 257
+ T+ A +
Sbjct: 244 ENGYYEVTVEDDPTSPDAGKLKLGALAGTQPQAGNLKEVTTVKGKGAIDVQLGTDTATAS 303
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ S I K S + + V + +
Sbjct: 304 ITGAKLFKLEDANGKDTGSFALIGDDGKQYAANVDQKTGAVSVKTMSYTDADGVKHDNVK 363
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
V+ + + + + + ++ A E+ ++ ID + +
Sbjct: 364 VELGGSDGKTEVVTATDGKTYSVSDLQGKSLKTDSIAAISTQKTEDPLAAIDKALSQVDS 423
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G+I +R + + + R+ DAD A+E + +S Q QQ L+
Sbjct: 424 LRSNLGAIQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLA 483
Query: 438 IVNNSTARILSLFR 451
N +T +LSL R
Sbjct: 484 QANQTTQNVLSLLR 497
>gi|297544030|ref|YP_003676332.1| flagellin domain-containing protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296841805|gb|ADH60321.1| flagellin domain protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 418
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 68/451 (15%), Positives = 142/451 (31%), Gaps = 38/451 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + L N + +++SSG R++ A+D+AA +I++ M++ L+
Sbjct: 3 INHNLSALNAWRALSINTTNTQKSLEKLSSGYRINRASDDAAGLAISEKMRAQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ D +Q E+ QL ++
Sbjct: 63 QRNAQDGISLIQTAEGALNEVHSILQRMRELAVQAANDTNTVADRAELQKEVDQLAQEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN + L T I + + + V +
Sbjct: 123 RIGENTEFNTQKLLNGTY-KGTFHIGANENQNISLNIGDMRAYNLGVVGDAKIEVTATVT 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + D + +K ++
Sbjct: 182 DGGDLTTDIADGTYTVKYNDSTG----------------------------------KYE 207
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
T + + S +V + I G + +
Sbjct: 208 LLNANGVAVATSTNGKDWTATVGDDTLTFSEAVISGNVTIASGTATATGTVDNGGLQAGE 267
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
Y + A + V T S + + + + +T +++ A
Sbjct: 268 YTYVAADSALKDSNGNVVATTSDGITFVDASGATVLTFGAALTDGEEISIGGVDISDQAA 327
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ I+ I+ +A K+G+ +R+ + + + + + R+ D DMA E
Sbjct: 328 ANAAITTINNAIEAVSAERSKLGAYQNRLEHTINNLSVASENLTAAESRIRDVDMAKEMM 387
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q A L+ N IL L R
Sbjct: 388 EFTKNNILNQAATAMLAQANQLPQTILQLLR 418
>gi|116489750|gb|ABJ98782.1| phase I flagellin middle domain variant C3 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 483
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 75/480 (15%), Positives = 134/480 (27%), Gaps = 31/480 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI------------------------- 154
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 155 ---RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+D + TD L + K +V
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 212 DASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
K T +G V L AA +
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVKNVALTAAGVTGTASVVKMSYTDN 303
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
+ + + D + AT + T T + +
Sbjct: 304 NGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVS 363
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
S + + A E + ID + +G++ +R +
Sbjct: 364 IGGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNS 423
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + R+ D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 AITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 483
>gi|38049884|gb|AAR10561.1| phase 2 flagellin [Salmonella enterica]
Length = 499
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 71/496 (14%), Positives = 131/496 (26%), Gaps = 47/496 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G + + A +
Sbjct: 184 KAVTDGSGGKTLNISGLDAAAIKTAVGGTPTGTGEIKDNKVYHNSTDGKYYVEVAGYTSG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A T T+ + + S T N +++
Sbjct: 244 ENGFYEVDANPADGTVTFATGATKITAKPADVEEVTTVQSKPIALSAEVKTQLTANGVST 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK- 358
V + T N +
Sbjct: 304 AAADKGQLVTMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTKYTDKDGNTQT 363
Query: 359 -------------------------------------------LAMEEMVSFIDTQIKCA 375
E + ID +
Sbjct: 364 TLNKLGGVDGKTEVVSIEGKTYTAAKAKDHNFKADPDLAEAAVKTTENPLQKIDAALAQV 423
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 DALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSV 483
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 LAQANQVPQNVLSLLR 499
>gi|38050149|gb|AAR10693.1| phase 1 flagellin [Salmonella enterica]
Length = 495
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 70/492 (14%), Positives = 136/492 (27%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY----------- 168
++ + FNG L D + A I Q +D
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 169 -----------------------------YLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + ++ + Y +D
Sbjct: 184 EAVTPPAKLDITGLTGADIKTGVDGATVDTGSIKDGKVYYNSTSKDYYVQVDFGTSADAA 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++V+ + + T + A + A
Sbjct: 244 KSGYYKVNVNDDGTVSMTADTTKEATTPTDITEVTQVQKPVAAPAAIQDQLTAAHVTGAD 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + D AT + T T
Sbjct: 304 TAEMVKMSYTDKNGKTIDGGFGVKVGDDIYAATKNKDGSFSINTTKYTDKDGNTQTALNK 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + + + + A E + ID + A
Sbjct: 364 LGGVDGKTEVVSIEGKTYTAAKAKDHDFKAQPELAEAATATTENPLQKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|116489758|gb|ABJ98786.1| phase I flagellin middle domain variant C110 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 477
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 71/474 (14%), Positives = 138/474 (29%), Gaps = 25/474 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ-----ITTIDYYLDPET 174
++ + FNG L D + A I Q +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ L + K D + + K + T +G K
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
K + + A + + + + + + T
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGDLTEAKAALTAAGVTGTASVVKMSYTDNNGKTID 303
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA 354
+ G + + + ++T T D G + +
Sbjct: 304 GGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTY 363
Query: 355 YNE-----------------KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
E + ID + +G++ +R + +
Sbjct: 364 AASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLG 423
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R+ D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 NTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 477
>gi|324113641|gb|EGC07616.1| flagellin [Escherichia fergusonii B253]
Length = 502
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 73/499 (14%), Positives = 136/499 (27%), Gaps = 50/499 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + I+ SIQSEI Q S++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRIRELSVQATNGTNSDSDLTSIQSEIQQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG--------------------SFIRDDNG 159
++ + FNG L +D + A
Sbjct: 124 DRVSGQTQFNGVKVLASDQDMTIQVGANDGETITIKLQEINSDTLGLSGFGIKDPTKLKA 183
Query: 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
TT D+ + + +
Sbjct: 184 ATAETTSFGGTPITLKNADTLDADIATKAQGTTPGTSPKGKSEGGIVADAAGQLYVKVVG 243
Query: 220 KKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ T A + A T T T
Sbjct: 244 SDKDTENGYYEVTVNNDPTSPDAGKLTLGNKAGTQPQAKDLTDVTTVKGNDAVKVKLGTD 303
Query: 280 IRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD--------- 330
+ +++ D G VD ++ + +
Sbjct: 304 TATASITGAKLFKLEDANGKDSGSFALIGNDGKQYAANVDQKTGAVSVKTMSYTDADGVK 363
Query: 331 ------------------LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ + + ++ A E+ ++ ID +
Sbjct: 364 HDNVKVELGGSDGKTEVVTATDGKTYSVSDLQGKSLKTDSIAAISTQKTEDPLAAIDKAL 423
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ +G+I +R + + + R+ DAD A+E + +S Q QQ
Sbjct: 424 SQVDSLRSNLGAIQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAG 483
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N +T +LSL R
Sbjct: 484 TSVLAQANQTTQNVLSLLR 502
>gi|297011|emb|CAA78780.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Rostock]
Length = 504
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 142/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 122
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 123 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 182
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 183 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAVAPDKVYVNAANGQLTTDDAENNT 242
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 243 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGDDGNGKVSTTING 302
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 303 EKVTLTVADIGIGAADVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 362
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 363 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 422
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 423 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 482
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 483 QAGTSVLAQANQVPQNVLSLLR 504
>gi|260439399|ref|ZP_05793215.1| flagellin [Butyrivibrio crossotus DSM 2876]
gi|292808195|gb|EFF67400.1| flagellin [Butyrivibrio crossotus DSM 2876]
Length = 452
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 70/451 (15%), Positives = 151/451 (33%), Gaps = 4/451 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N SA+ A+ +L L +R+SSGLR++ A D+A+ +I++ M + A+
Sbjct: 3 VNCNISAIIANNQLSKSEDALSSAIERLSSGLRINKAEDDASGMAISKKMHAQIKAIERS 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
++ G S V A+ +S+ +++ ++ + G + +IQ EI QL ++
Sbjct: 63 ANNTQDGVSVVQTAEGALSELENILQRMRELSVKAASETNSGEEKDAIQVEINQLIKEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + +N L L + +V + + +V LD
Sbjct: 123 RISTSTEYNTMTLLDGTLQRRAYADKDNVSATISDTVTAGEYSIEVTKEATRPSVDLDLP 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + K+ +E S + S + +
Sbjct: 183 ANAPSAGYISINGVKVDIEAGESISSIESKIQEACERSNATMSKDNGTMTISGKMYGKNE 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
Q K + ++ + ++
Sbjct: 243 QLKITFSSAEIAGMFGQTDTNIMVNGTDCEAALKKGFSSTATLTTEGANITVKDIGSFEM 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
D + + + +++ G V+++ N + E A
Sbjct: 303 DIEIPGDTKYAECVIKATDIGIMRIQAGANEGQQLSIGIPEVSMHTLGLDNLNLRTEDCA 362
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ++ +D I ++ K+G+ +R+ + + + + R+ D DMA+E T
Sbjct: 363 K-DAMTRLDDAISKVSSIRSKLGAYQNRLETATGNLNEYNENITAALSRIEDCDMAAEMT 421
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+A + Q A L+ N IL L +
Sbjct: 422 EFTAQNVKTQAATSILAQANQRPETILQLLQ 452
>gi|38050179|gb|AAR10708.1| phase 1 flagellin [Salmonella enterica]
Length = 413
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 74/452 (16%), Positives = 146/452 (32%), Gaps = 45/452 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ G+D KSIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQAANGSNSGSDLKSIQDEIDQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG+ L D + A I +D + +
Sbjct: 124 NRVAEQTDFNGKKVLSQDGQLTIQVGANDGETITIDLQKIDKTELGLDKLDVTKGIATTV 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S+ + +
Sbjct: 184 SSGASVVGDVKIAAADFDNAKATG------------------------------------ 207
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + + + + T ++++
Sbjct: 208 ------GPAADKLSLTKDDTAAAKYYAATVDTTTGKISFDSDKDVTASAGTPTAVSTLSR 261
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + + Y D + L + + L K+ ++ + VT + A
Sbjct: 262 EVKFDGADLKADQSLVKYKDDKGKDLYAIQTLDKDGNASFKSVTFSSDGKTTEGAAVALA 321
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID +K A ++G++ +R + + + R+ D+D A+E
Sbjct: 322 ANVDPLAKIDDALKTVDAFRSQLGAVQNRFESAITNLGNTVNNLSSARSRIEDSDYATEV 381
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 382 SNMSRAQILQQAGTSVLAQANQVPQSVLSLLR 413
>gi|225570005|ref|ZP_03779030.1| hypothetical protein CLOHYLEM_06100 [Clostridium hylemonae DSM
15053]
gi|225161475|gb|EEG74094.1| hypothetical protein CLOHYLEM_06100 [Clostridium hylemonae DSM
15053]
Length = 483
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 76/481 (15%), Positives = 160/481 (33%), Gaps = 33/481 (6%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A+++ + L + N + +++SSG R++ A D+AA +I++ M++ L
Sbjct: 3 IQHNIAALNSYRNLTNNNGAVSKNLEKLSSGYRINRAGDDAAGLAISEKMRAQITGLETA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD----SKSIQSEITQLQSQL 119
G S V A+ +++ +++ + D ++Q EI L+ ++
Sbjct: 63 QKNANDGISLVQTAEGALTEVHSMLNRMVELADQSANGTYDNETDRANLQKEIQSLKDEI 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ G++FNG N L LG +TA+ + +V G I + V+ I Y +
Sbjct: 123 DRISEGTNFNGINLLDGSLGGATATASATVSGYQIGGLSTDVKGIKITYDAGTTGDAQTA 182
Query: 180 STDGTERYGLLDRNHKIKVEP-----------------------------QVLKDIDVSV 210
+ D + G+L+ V K +
Sbjct: 183 AVDALDENGILNITVSNDGTTLSNADLEAALKNAGYKDAKVTGTGTKVAADVAKVDTTKI 242
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
+ TI+ + + A + A+ A A + S +
Sbjct: 243 DPTAATIAGTRADGFKINFAKGETGLASVQITGTAADGAHGATNTDGAVVIQLDNTKSYT 302
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ + + +K G V + T
Sbjct: 303 STEINKILSDAGAGAMTVEFSGSKLGSDIVAGLGLGAAQNVTDGVGKQGAGLTLQIGDTA 362
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
+ + + + + + + V I I ++ G +G+I +R+
Sbjct: 363 DSFNQLTVKVGNMSSTSLGIGSIDISTQEGGKNAVDLIKKAINSVSSTRGDLGAIQNRLE 422
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + + + R+ D DMA+E + Q + L+ N +L L
Sbjct: 423 HTINNLSVTTENMTAAESRIRDVDMANEMMAYTKNNILVQASQAMLAQANQIPQGVLQLL 482
Query: 451 R 451
+
Sbjct: 483 Q 483
>gi|38050221|gb|AAR10729.1| phase 1 flagellin [Salmonella enterica]
Length = 501
Score = 221 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 72/498 (14%), Positives = 132/498 (26%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTA--------------SIAKSVIGSFIRDDNGKVQITT 165
++ + FNG L D + I +G + K + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT--------- 216
D + V+KD V A
Sbjct: 184 EVVTDGSGGKAFDLTALNDTNLKAAVGGTPAPTGTAVVKDDKVYYNSADDKYFVEIDGLS 243
Query: 217 -----------------------ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
+ A + A +
Sbjct: 244 SGNGFYEVSANATTGALTIGAGLTTAGATVPAGAEEVTSVQSKPVALSADVKKQLTDSGV 303
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+ A T + + AT + T T
Sbjct: 304 SVADAGKGRLVTMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSISINTTKYTDKDGNT 363
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ S + + A E + ID +
Sbjct: 364 KSALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAATTTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|168239195|ref|ZP_02664253.1| flagellin [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194737030|ref|YP_002114990.1| flagellin [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|38049929|gb|AAR10583.1| phase 1 flagellin [Salmonella enterica]
gi|50830948|gb|AAT81639.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Heidelberg]
gi|194712532|gb|ACF91753.1| flagellin [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197288081|gb|EDY27468.1| flagellin [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 506
Score = 221 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 74/503 (14%), Positives = 135/503 (26%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR--------------DDNGKVQITT 165
++ + FNG L D + A I +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKEISSKTLGLDKLNVQDAYTPKE 183
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+D T + T + ++ DI +
Sbjct: 184 TAVTVDKTTYKNGTDTVTAQSNTDIETAIGGGATGVTGADIKFKDGQYYLDVKGGASAGV 243
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT-------------------- 265
+ D A T
Sbjct: 244 YKATYDETTKKVNIDTTDKTPLATAEATAIRGTATITHNQIAEVTKEGVDTTTVAAQLAA 303
Query: 266 -----------------SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
K+ V ++MG+ K + T +
Sbjct: 304 AGVTGADKDNTSLVKLSFEDKNGKVIDGGYAVKMGDDFYAATYDEKTGTITAKTTTYTDG 363
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
A V T + S + + R E + I
Sbjct: 364 AGVAQTGAVKFGGANGKSEVVTATDGKTYLASDLDKHNFRTGGELKEVNTDKTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|308054781|gb|ADO01437.1| flagellin [Salmonella enterica subsp. diarizonae]
Length = 495
Score = 221 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 70/492 (14%), Positives = 135/492 (27%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ----------------- 162
++ + FNG L D + A I Q
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKKYDVKS 183
Query: 163 -----------------------ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + ++ + Y +D
Sbjct: 184 EAVTPPAKLDITGLTGADIKTGVDGATVDTGSIKDGKVYYNSTSKDYYVQVDFGTSADAA 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++V+ + + T + A + A
Sbjct: 244 KSGYYKVNVNDDGTVSMTADTTKEATTPTDITEVTQVQKPVAAPAAIQAQLTAAHVTGAD 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + D AT + T T
Sbjct: 304 TAEMVKMSYTDKNGKTIDGGFGVKVGDDIYAATKNKDGSFSINTTKYTDKDGNTQTALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + + + + A E + ID + A
Sbjct: 364 LGGVDGKTEVVSIEGKTYTAAKAKDHDFKAQPELAEAATTTTENPLQKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|85058036|ref|YP_453738.1| flagellin FliC [Sodalis glossinidius str. 'morsitans']
gi|84778556|dbj|BAE73333.1| flagellin FliC [Sodalis glossinidius str. 'morsitans']
Length = 419
Score = 221 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 78/455 (17%), Positives = 145/455 (31%), Gaps = 42/455 (9%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M+ I TN +++A L +L R+SSGLR++ A D+AA +I+ S
Sbjct: 1 MSQVINTNILSITAQNNLNKSQNSLSTAIQRLSSGLRINSAKDDAAGQAISNRFTSLING 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI----QSEITQL 115
L+ S G + A+ +++ + + I+ + S + Q EI +
Sbjct: 61 LTQASRNANDGIAVAQTAEGAINEINENLQAIRRLTVQVKSTASISDADKKSIQDEIGKR 120
Query: 116 QSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
++ IA + FNG L D + A I N ++ ++ + + V
Sbjct: 121 LEEIDRIAEQTEFNGIRILSEDQKLAIQVGANDGQIIDIDLFNMGIEKLGMEGFNVDDGV 180
Query: 176 LLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
+ + + +K E + + D +Y G TK K
Sbjct: 181 SVPGKLGSEIKTFTGEVAPSLKGETEEVNKTDKKIYFQDGIYYTKSATKDEYYKVERKGQ 240
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
+ F+ K I + P T +G + T +
Sbjct: 241 TSQFEITKAENGIELTSPDTVEKIEATDPVTGLAKGESLYNYTDEKGAT----------- 289
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
+ + + K++ L
Sbjct: 290 --------------------------TYAIKGQDASGKDVYYAAKYDALTGKATKEGVIS 323
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
K A E+ + ID I A G +G+ +R+ + + + + + DAD
Sbjct: 324 TGKDATEDPLKTIDKAIAIVDGARGALGATQNRLGSVINSLSTTVANLSQSRSNIEDADF 383
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A+E + ++ QQ L+ N IL L
Sbjct: 384 ATEVSNMNRANILQQAGTAVLAQANAVPQGILKLL 418
>gi|124268051|ref|YP_001022055.1| flagellin-related hook-associated protein [Methylibium
petroleiphilum PM1]
gi|124260826|gb|ABM95820.1| flagellin-related hook-associated protein [Methylibium
petroleiphilum PM1]
Length = 404
Score = 221 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 77/452 (17%), Positives = 149/452 (32%), Gaps = 54/452 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I TN +++A + L +L R+SSGLRV+ A D+AA +IA+ M + L+
Sbjct: 4 TINTNVISLNAQRNLNTSQSSLATSMQRLSSGLRVNSAKDDAAGLAIAERMNTQVRGLNV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S A+ + K D++ ++ D K++Q+E+ QL+ ++
Sbjct: 64 AARNANDGISLAQTAEGALGKLGDMLQRMRELAVQSANATNSADDRKALQAEVNQLRDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A+ +SFNG+ L ++T + + + + E D
Sbjct: 124 DRVAKQTSFNGKKLLDGSFTAATFQVGANSGDAITVGSLTNATAAVLSKITYAEGASADL 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ DGT L
Sbjct: 184 TLDGTTITDLA------------------------------------------------- 194
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + + + A +++ + I + +
Sbjct: 195 --AIADGDLQITIDGGGANEQIVEVGPIAEASTETERLGQIAEAINRKTTDTGVSAYLVK 252
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ T K + +D G ++ + +
Sbjct: 253 NDDGTFKLDIKASKLDAAGAALAVEFTGFTTATTGLDEGDAIAEVADDIGLSDLNIETDS 312
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ID+ + A G +G++ SR I++ + + GR++DAD A E+
Sbjct: 313 ATWVSIKKIDSALDQINGARGTLGALQSRFENAVSNIQIQAENLSAARGRIMDADFAMET 372
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
LS Q QQ ++ N ++LSL +
Sbjct: 373 ANLSRAQILQQAGTAMVAQANQLPQQVLSLLK 404
>gi|38049882|gb|AAR10560.1| phase 2 flagellin [Salmonella enterica]
gi|38049886|gb|AAR10562.1| phase 2 flagellin [Salmonella enterica]
Length = 499
Score = 221 bits (561), Expect = 3e-55, Method: Composition-based stats.
Identities = 71/496 (14%), Positives = 131/496 (26%), Gaps = 47/496 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G + + A +
Sbjct: 184 KAVTDGSGGKTLNISGLDAAAIKTAVGGTPTGTGEIKDNKVYHNSTDGKYYVEVAGYTSG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A T T+ + + S T N +++
Sbjct: 244 ENGFYEVDANPADGTVTFATGATKITAKPADVEEVTTVQSKPIALSAEVKTQLTANGVST 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK- 358
V + T N +
Sbjct: 304 AAADKGQLVTMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTKYTDKDGNTQT 363
Query: 359 -------------------------------------------LAMEEMVSFIDTQIKCA 375
E + ID +
Sbjct: 364 TLNKLGGVDGKTEVVSIEGKTYTAAKAKDHNFKADPDLAEAAAKTTENPLQKIDAALAQV 423
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 DALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSV 483
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 LAQANQVPQNVLSLLR 499
>gi|38049878|gb|AAR10558.1| phase 2 flagellin [Salmonella enterica]
Length = 499
Score = 221 bits (561), Expect = 3e-55, Method: Composition-based stats.
Identities = 71/496 (14%), Positives = 131/496 (26%), Gaps = 47/496 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G + + A +
Sbjct: 184 KAVTDGSGGKTLNISGLDAAAIKTAVGGTPTGTGEIKDNKVYHNSTDGKYYVEVAGYTSG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A T T+ + + S T N +++
Sbjct: 244 ENGFYEVDANPADGTVTFATGATKITAKPADVEEVTTVQSKPIALSADVKTQLTANGVST 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK- 358
V + T N +
Sbjct: 304 AAADKGQLVTMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTKYTDKDGNTQT 363
Query: 359 -------------------------------------------LAMEEMVSFIDTQIKCA 375
E + ID +
Sbjct: 364 TLNKLGGVDGKTEVVSIEGKTYTAAKAKDHNFKADPDLAEAAAKTTENPLQKIDAALAQV 423
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 DALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSV 483
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 LAQANQVPQNVLSLLR 499
>gi|1706841|sp|Q06982|FLIC_SALRO RecName: Full=Flagellin; AltName: Full=Phase 1-C flagellin
gi|38049991|gb|AAR10614.1| phase 1 flagellin [Salmonella enterica]
gi|50830906|gb|AAT81618.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Rostock]
Length = 505
Score = 221 bits (561), Expect = 3e-55, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 142/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAVAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 244 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGDDGNGKVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 304 EKVTLTVADIGIGAADVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|38049907|gb|AAR10572.1| phase 1 flagellin [Salmonella enterica]
Length = 495
Score = 221 bits (561), Expect = 3e-55, Method: Composition-based stats.
Identities = 73/492 (14%), Positives = 141/492 (28%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLSVQDAYTPKG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDID-------------------------------- 207
+ + + + D
Sbjct: 184 TAVTRDVTTYKNGGTTLTAPDAAAIDTALGTTGAAGTAAVKFKDGNYFVEVTGTTKDGLY 243
Query: 208 --------VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
A+ T + A A + A
Sbjct: 244 EATVDAAGAVTMTANKATVTGASTVTENQIVDAVTPTPVDTVAAATALTNAGVTGATGNT 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + K+ V + +++GN K + T
Sbjct: 304 SLVKMSFEDKNGKVTDAGYALKVGNDYYAADYDEKTGEIKAKTVNYTDATGATKTGAVKF 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S V + + + L +E ++ ID + A
Sbjct: 364 GGANGKTEVVTTVDGNTYQASDVKGHNFQSGGALSEAVPLKLENPLAKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|38049876|gb|AAR10557.1| phase 2 flagellin [Salmonella enterica]
Length = 499
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 70/496 (14%), Positives = 131/496 (26%), Gaps = 47/496 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G + + A +
Sbjct: 184 KAVTDGSGGKTLNISGLDAAAIKTAVGGTPTGTGEIKDNKVYHNSTDGKYYVEVAGYTSG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A T T+ + + S T N +++
Sbjct: 244 ENGFYEVDANPADGTVTFATGATKITAKPADVEEVTTVQSKPIALSAEVKTQLTANGVST 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK- 358
+ + T N +
Sbjct: 304 AAADKGQLLTMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTKYTDKDGNTQT 363
Query: 359 -------------------------------------------LAMEEMVSFIDTQIKCA 375
E + ID +
Sbjct: 364 TLNKLGGVDGKTEVVSIEGKTYTAAKAKDHNFKADPDLAEAAAKTTENPLQKIDAALAQV 423
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 DALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSV 483
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 LAQANQVPQNVLSLLR 499
>gi|116489752|gb|ABJ98783.1| phase I flagellin middle domain variant C108 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 482
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 73/479 (15%), Positives = 136/479 (28%), Gaps = 30/479 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ-----ITTIDYYLDPET 174
++ + FNG L D + A I Q +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ L + K D + + K + T +G K
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 235 ANATFDQAKGIATIPVPL----------------------PAAPAAPNTTSGTSGSKSPS 272
K + + AA + +
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEEAKAALTAAGVTGTASVVKMSYTDNN 303
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + D + AT + T T + +
Sbjct: 304 GKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSI 363
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
S + + A E + ID + +G++ +R +
Sbjct: 364 GGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSA 423
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + R+ D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 ITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 482
>gi|308048742|ref|YP_003912308.1| flagellin domain protein [Ferrimonas balearica DSM 9799]
gi|307630932|gb|ADN75234.1| flagellin domain protein [Ferrimonas balearica DSM 9799]
Length = 466
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 74/463 (15%), Positives = 151/463 (32%), Gaps = 15/463 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M+A + L N NL+ +R+SSGLR++ A D+AA I+ + S L
Sbjct: 4 TVNTNVTSMTAQRNLNTSNANLQQSMERLSSGLRINSAKDDAAGLQISNRLTSQVRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M ++ +++ +++ D ++Q EI+ LQ++L
Sbjct: 64 AMRNANDGISIAQTAEGAMQESTNILQRMRDLSLQSANGSNSAEDRTAMQKEISALQTEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA ++F G+ L GS + + + + + + +D +
Sbjct: 124 TRIAETTAFGGQQLLDGSFGSQSFQVGSNANETIGVSLSNVSAGSLGYQQIDSAGSAAGA 183
Query: 180 STDGTERYGLLDRNHKIKVE------------PQVLKDIDVSVYDASGTISTKKFKLATT 227
+ + D++ + I + T
Sbjct: 184 AIANNGNGSFGLGATAGDITVAGRDGKVDITLAATTTSQDIADAVNNADIGIEAKTEVTA 243
Query: 228 SGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
+ + L A + + G K+ + + N
Sbjct: 244 TISGLAAGDQGSLEVGDKTYDLSEFAMNKEGLVDKLNEDGFKAELTDSGDISLTAENVAG 303
Query: 288 WVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT 347
++ T + + + S D S VT +
Sbjct: 304 VAITGGASTNTVTLNGNAADDSNNPAVTSKIVLTSENSFGVADDNTADISEVFGVTGSSI 363
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
+ ++ +S ID I + +G++ +R+ + + ++ V
Sbjct: 364 NSVDAIDITSAEGAQDAISVIDAAIAGIDSQRADLGAVQNRLGHTINNLGNIQTNVADAR 423
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R+ D D A E+ ++ Q QQ L+ N LSL
Sbjct: 424 SRIQDVDFAKETAEMTKQQVLQQSGSAMLAQANQIPQLALSLL 466
>gi|1333832|emb|CAA27130.1| unnamed protein product [Salmonella enterica subsp. enterica
serovar Muenchen]
Length = 509
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 69/502 (13%), Positives = 137/502 (27%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 8 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 67
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 68 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRLNEI 127
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------------------------- 153
++ + FNG L D + A
Sbjct: 128 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKEISSKTLGLDKLNVQDAYTPKE 187
Query: 154 -------IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
NG IT + ++ D + + V+ +
Sbjct: 188 TAVTVDKTTYKNGTDTITAQSNTDIQTAIGGGATGVTGADIKFKDGQYYLDVKGGASAGV 247
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ YD + T A V +
Sbjct: 248 YKATYDETTKKVNIDTTDKTPLATAEATAIRGTATITHNQIAEVTKEGVDTTTVAAQLAA 307
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + + +++ D + + ++ T
Sbjct: 308 AGVTGADKDNTSLVKLSFEDKNGKVIDGGYAVKMGDDFYAATYDEKQVQLLLNNHYTDGA 367
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME-----------------EMVSFID 369
G + + +T L + ID
Sbjct: 368 GVLQTGAVKFGGANGKSEVVTATVGKTYLASDLDKHNFRTGGELKEVNTDKTENPLQKID 427
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ +G++ +R + + + + R+ D+D A+E + +S Q Q
Sbjct: 428 AALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQ 487
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 488 QAGTSVLAQANQVPQNVLSLLR 509
>gi|38049880|gb|AAR10559.1| phase 2 flagellin [Salmonella enterica]
Length = 499
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 71/496 (14%), Positives = 131/496 (26%), Gaps = 47/496 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G + + A +
Sbjct: 184 KAVTDGSGGKTLNISGLDAAAIKTAVGGTPTGTGEIKDNKVYHNSTDGKYYVEVAGYTSG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A T T+ + + S T N +++
Sbjct: 244 ENGFYEVDANPADGTVTFATGATKITAKPADVEEVTTVQSKPIALSAEVKTQLTANGVST 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK- 358
V + T N +
Sbjct: 304 AAADKGQLVTMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTKYTDKDGNTQT 363
Query: 359 -------------------------------------------LAMEEMVSFIDTQIKCA 375
E + ID +
Sbjct: 364 TLNKLGGIDGKTEVVSIEGKTYTAAKAKDHNFKADPDLAEAAAKTTENPLQKIDAALAQV 423
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 DALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSV 483
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 LAQANQVPQNVLSLLR 499
>gi|450558|emb|CAA78776.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Dublin]
Length = 504
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 142/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 122
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 123 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 182
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 183 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAVAPDKVYVNAANGQLTTDDAENNT 242
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 243 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGDDGNGKVSTTING 302
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 303 EKVTLTVADIAIGAADVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 362
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 363 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 422
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 423 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 482
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 483 QAGTSVLAQANQVPQNVLSLLR 504
>gi|38050169|gb|AAR10703.1| phase 1 flagellin [Salmonella enterica]
Length = 499
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 70/496 (14%), Positives = 131/496 (26%), Gaps = 47/496 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +D+
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVDN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G + + A +
Sbjct: 184 EVVTDGSGGKALNISGLDDATIKTAVGGTPTGTGVIKDNKVYHNSTDGKYYVEVAGYTSG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A T T+ + + S T N +++
Sbjct: 244 ENGFYEVDANPTDGTVTFAAGATKITAKPAGVEEVTTVQSKPVALSADVKTQLTNNGVST 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK- 358
V + T N +
Sbjct: 304 ADADKGQLVTMSYTDKNGKTIDGGLGVKVGADIYAATKNKDGSISINTTKYTDKDGNTQT 363
Query: 359 -------------------------------------------LAMEEMVSFIDTQIKCA 375
E + ID +
Sbjct: 364 ALNKLGGVDGKTEVVTIDSKTYAAAKAKDHNFKADPDLALVATDTTENPLQKIDAALAQV 423
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 DALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSV 483
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 LAQANQVPQNVLSLLR 499
>gi|38050261|gb|AAR10749.1| phase 1 flagellin [Salmonella enterica]
Length = 504
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 73/501 (14%), Positives = 138/501 (27%), Gaps = 52/501 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGESITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAQNNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
T T K K + + +TT
Sbjct: 244 AVDLFKTTKSTAGTDDAKAIANVIKGGKEGDTFDYKGVSFTIDTKAGNDGNGTVSTTING 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV-------------- 311
+ R + + + + T +
Sbjct: 304 EKVTLTVADIGGGGSVNDATLQSSRNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKG 363
Query: 312 -GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ K ++ N DA K + ++ ID+
Sbjct: 364 ESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLAAIDS 423
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ A +G+I +R + + + R+ DAD A+E + +S Q QQ
Sbjct: 424 ALSKVDAVRSSLGAIQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSKAQILQQ 483
Query: 431 LAVQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 AGTSVLAQANQVPQNVLSLLR 504
>gi|116489814|gb|ABJ98814.1| phase I flagellin middle domain variant C85 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 433
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 68/452 (15%), Positives = 130/452 (28%), Gaps = 25/452 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y ++ AT G + +
Sbjct: 184 TAATVTGYADTTIALD----------------------NSTFKASATGLGGTDQKIDGDL 221
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + D + AT +
Sbjct: 222 KFDDTTGKYYAKVTVTGGTGKDGYYEVSVDKTNGEVIDGGLAVKVGDDYYSATQNKDGSI 281
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T T + + S + + A
Sbjct: 282 SINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAAT 341
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
E + ID + +G++ +R + + + + R+ D+D A+E
Sbjct: 342 TTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEV 401
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 402 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 433
>gi|38049866|gb|AAR10552.1| phase 2 flagellin [Salmonella enterica]
gi|38049868|gb|AAR10553.1| phase 2 flagellin [Salmonella enterica]
Length = 495
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 74/492 (15%), Positives = 142/492 (28%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + S
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVKS 183
Query: 180 ----------------------------------------STDGTERYGLLDRNHKIKVE 199
++ + Y +D
Sbjct: 184 EAVTPPAKLDISGLTGTAIKTGVDGATVDTGSIKDGKVYYNSTSKDYYVEVDFGTSADAA 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++V+ ++ + T +G A + A
Sbjct: 244 KSGYYKVNVADDGTVSMAASTTKEGTTPTGITEVTQVQKPVAAPAAIQAQLTAAHVTGAD 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + D + AT K + T+ T
Sbjct: 304 TAEMVKMSYTDKNGKTIDGGYAVKVGDDYYAATQKKDGSFSVNTTSYTDKDGNTKTALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E + ID + A
Sbjct: 364 LGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|308054739|gb|ADO01416.1| flagellin [Salmonella enterica subsp. salamae]
Length = 496
Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats.
Identities = 72/493 (14%), Positives = 140/493 (28%), Gaps = 44/493 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLSVQDAYTPKG 183
Query: 180 STDGTERYGLLDRNHKIKVEP--------------------------------------- 200
+ + D +
Sbjct: 184 TAVTKDVTTYKDGGTTLTAPTAAEIDTALGLTGATGSAAVKFKDGNYFVEVTGTTTKDGL 243
Query: 201 --QVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
+ A+ + T + A A + A
Sbjct: 244 YEATVDAAGAVTMTANKSTVTGAGTVTKNQIVDAVTPAPVDTAAAATALTNAGVTGATGN 303
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
+ + K+ V + +++GN K + T
Sbjct: 304 TSLVKMSFEDKNGKVTDAGYALKVGNDYYAADYDEKTGEIKAKTVNYTDATGATKTGAVK 363
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ S V + + + E ++ ID + A
Sbjct: 364 FGGANGKTEVVTTVDGNTYQASDVKGHNFQSGGALSEAVTTKTENPLAKIDAALAQVDAL 423
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 RSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQ 483
Query: 439 VNNSTARILSLFR 451
N +LSL R
Sbjct: 484 ANQVPQNVLSLLR 496
>gi|38049772|gb|AAR10505.1| phase 2 flagellin [Salmonella enterica]
Length = 465
Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats.
Identities = 81/463 (17%), Positives = 148/463 (31%), Gaps = 15/463 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D T + + + D T L+ +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNT-LTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVK 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T T + + + + + AT + A T
Sbjct: 183 DTAVTTKAYANNGTTLDVSGLADAAKNGDYEVNVATDGTVTLAAGATKTTMPAGATTKTE 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
Q V A A + + + + + G + A
Sbjct: 243 VQELKDTPAVVSADAKNALIAGGVDATDANGAELVKMSYTDKNGKTIEGGYALKAGDKYY 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD------ 353
Y +T A T Y + TT + L + T +A+
Sbjct: 303 AADYDEATGAIKAKTTSYTAADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFK 362
Query: 354 -----AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
A E + ID + A +G++ +R + + + + +
Sbjct: 363 AQPELAEAAAKTTENPLQKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARS 422
Query: 409 RLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 423 RIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 465
>gi|476250|gb|AAA17864.1| phase 1 flagellin [Salmonella enterica]
gi|38049981|gb|AAR10609.1| phase 1 flagellin [Salmonella enterica]
Length = 504
Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats.
Identities = 72/501 (14%), Positives = 137/501 (27%), Gaps = 52/501 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDDAAPDKVYVNAANGQLTTDDAQNNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
T T K K + + +TT
Sbjct: 244 AVDLFKTTKSTAGTDDAKAIANVIKGGKEGDTFDYKGVSFTIDTKTGNDGNGTVSTTING 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV-------------- 311
+ + + + + + T +
Sbjct: 304 EKVTLTVADIGGGGSVNDATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKG 363
Query: 312 -GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ K ++ N DA K + ++ ID+
Sbjct: 364 ESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLAAIDS 423
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ A +G+I +R + + R+ DAD A+E + +S Q QQ
Sbjct: 424 ALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQQ 483
Query: 431 LAVQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 AGTSVLAQANQVPQNVLSLLR 504
>gi|308054741|gb|ADO01417.1| flagellin [Salmonella enterica subsp. salamae]
Length = 496
Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats.
Identities = 72/493 (14%), Positives = 140/493 (28%), Gaps = 44/493 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLSVQDAYTPKG 183
Query: 180 STDGTERYGL-----------------------------------------LDRNHKIKV 198
+ + K +
Sbjct: 184 TAVTKDVTTYKDGGTTLTAPTAAAIDTALGTTGATGTAAVKFKDGNYFVEVTGTTAKDGL 243
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
+ A+ + T + A A + A
Sbjct: 244 YEATVDAAGAVTMTANKSTVTGAGTVTKNQIVDAVTPVPVDTVAAATALTNAGVTGATGN 303
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
+ + K+ V + +++GN K + T
Sbjct: 304 TSLVKMSFEDKNGKVTDAGYALKVGNDYYAADYDEKTGEIKAKTVNYTDATGATKTGAVK 363
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ S V + + + E ++ ID + A
Sbjct: 364 FGGANGKTEVVTTVDGNTYQASDVKGHNFQSGGALSEAVTTKTENPLAKIDAALAQVDAL 423
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 RSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQ 483
Query: 439 VNNSTARILSLFR 451
N +LSL R
Sbjct: 484 ANQVPQNVLSLLR 496
>gi|308054819|gb|ADO01456.1| flagellin [Salmonella enterica subsp. indica]
gi|308054821|gb|ADO01457.1| flagellin [Salmonella enterica subsp. indica]
gi|308054823|gb|ADO01458.1| flagellin [Salmonella enterica subsp. indica]
Length = 495
Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats.
Identities = 72/492 (14%), Positives = 136/492 (27%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + S
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVKS 183
Query: 180 S----------------------------------------TDGTERYGLLDRNHKIKVE 199
T + + +
Sbjct: 184 EAVTPPATLSTTALDGAGLKTGTGSTTDTGSIKDGKVYYNSTSKDYYVEVEFTDATDQTN 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++V+ A + + T +G A + A
Sbjct: 244 KGGFYKVNVADDGAVTMTAATTKEGTTPTGITEVTQVQKPVAAPAAIQAQLTAAHVAGAD 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + AT + T T
Sbjct: 304 TAEMVKMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTKYTDKDGNTKTALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E + ID + A
Sbjct: 364 LGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|116489756|gb|ABJ98785.1| phase I flagellin middle domain variant C30 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 478
Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats.
Identities = 72/475 (15%), Positives = 134/475 (28%), Gaps = 26/475 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKS-----------------------VIGSFIRD 156
++ + FNG L D + A + D
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
V + S+T +D + K
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ T L + + L AA + +
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPVANADLTEAKAALTAAGVTGTASVVKMSYTDNNGKTI 303
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + D + AT + T T + +
Sbjct: 304 DGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKT 363
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
S + + A E + ID + +G++ +R + +
Sbjct: 364 YAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNL 423
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R+ D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 GNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 478
>gi|13377574|gb|AAK20804.1| flagellin [Salmonella enterica subsp. enterica]
Length = 504
Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats.
Identities = 72/503 (14%), Positives = 132/503 (26%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 2 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 62 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRLNEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR--------------DDNGKVQITT 165
++ + FNG L D + A I +
Sbjct: 122 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKEISSKTLGLDKLNVQDAYTPKE 181
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+D T + + + DI +
Sbjct: 182 TAVTVDKTTYKNGTDPITAQSNTDIQTAIGGGATGVTGADIKFKDGQYYLDVKGGASAGV 241
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT-------------------- 265
+ D A T
Sbjct: 242 YKATYDETTKKVNIDTTDKTPLATAEATAIRGTATITHNQIAEVTKEGVDTTTVAAQLAA 301
Query: 266 -----------------SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
K+ V ++MG+ K + T +
Sbjct: 302 AGVTGADKDNTSLVKLSFEDKNGKVIDGGYAVKMGDDFYAATYDEKTGAITAKTTTYTDG 361
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
V T + S + + R E + I
Sbjct: 362 TGVAQTGAVKFGGANGKSEVVTATDGKTYLASDLDKHNFRTGGELKEVNTDKTENPLQKI 421
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 422 DAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQIL 481
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 482 QQAGTSVLAQANQVPQNVLSLLR 504
>gi|38050213|gb|AAR10725.1| phase 1 flagellin [Salmonella enterica]
Length = 496
Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats.
Identities = 69/493 (13%), Positives = 131/493 (26%), Gaps = 44/493 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ V S G +
Sbjct: 184 KAVTGVSTLDTTGLTGTDIKTGVDGATTTSDSIKDGKVYYDGAAKNYYVEVDFSDTAKNG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+A A + + A ++
Sbjct: 244 YYKVNVADDGTVTMGASTTKEPAKPAGVVEVTKTQEEKAIKTSAEVKAALTAGGVDTADV 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN--- 356
N + + + G V + + +
Sbjct: 304 ATAEMVKMSYTDKNGKTIDGGYAVKVGDSYYAATQKKDGSFSVNTTSYTDKDGNTKSALN 363
Query: 357 --------------------------------------EKLAMEEMVSFIDTQIKCATAA 378
E + ID + A
Sbjct: 364 QLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDAL 423
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 RSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQ 483
Query: 439 VNNSTARILSLFR 451
N +LSL R
Sbjct: 484 ANQVPQNVLSLLR 496
>gi|38050219|gb|AAR10728.1| phase 1 flagellin [Salmonella enterica]
Length = 501
Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats.
Identities = 72/498 (14%), Positives = 132/498 (26%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTA--------------SIAKSVIGSFIRDDNGKVQITT 165
++ + FNG L D + I +G + K + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT--------- 216
D + V+KD V A
Sbjct: 184 EVVTDGSGGKAFDLTALNDTNLKAAVGGTPAPTGTAVVKDDKVYYNSADDKYFVEIDGLS 243
Query: 217 -----------------------ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
+ A + A +
Sbjct: 244 SGNGFYEVSANATTGALTIGAGLTTAGATVPAGAEEVTSVQSKPVALSADVKKQLTDSGV 303
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+ A T + + AT + T T
Sbjct: 304 SVADAGKGRLVTMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSISINTTKYTDKDGNT 363
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ S + + A E + ID +
Sbjct: 364 KSALNQLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAATTTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|198242796|ref|YP_002215129.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|1706836|sp|Q06971|FLIC_SALDU RecName: Full=Flagellin; AltName: Full=Phase 1-C flagellin
gi|153993|gb|AAA27081.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Dublin]
gi|38049985|gb|AAR10611.1| phase 1 flagellin [Salmonella enterica]
gi|38049987|gb|AAR10612.1| phase 1 flagellin [Salmonella enterica]
gi|50830908|gb|AAT81619.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Dublin]
gi|197937312|gb|ACH74645.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|326622877|gb|EGE29222.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Dublin str. 3246]
Length = 505
Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 142/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAVAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 244 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGDDGNGKVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 304 EKVTLTVADIAIGAADVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|38050133|gb|AAR10685.1| phase 1 flagellin [Salmonella enterica]
Length = 499
Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats.
Identities = 80/496 (16%), Positives = 137/496 (27%), Gaps = 47/496 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ---------ITTIDYYL 170
++ + FNG L D + A I Q D
Sbjct: 124 DRVSGQTQFNGVKVLAQDTTLTIQVGANDGETIDIDLKQINSQTLGLDALNVQKKYDVDS 183
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
T LD T G L E +KD V S + TT
Sbjct: 184 TGVTQSLDLKTAGITGATLKTSITGTTTETGSVKDGKVYYDKDSKNYYVEVDFTDTTDKT 243
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPN------------------------------ 260
A G + N
Sbjct: 244 AHAGFYKADVDADGNVVLAAGATKETKPTNAVEVKKTIDEKPLKASSDVQDALKASGIAD 303
Query: 261 -----TTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
T + + + + AT + + T+ T
Sbjct: 304 AVAEAATVVKMSYTDKNGKTIDGGYGIKVGNDYYAATKEKDGSYSINTTSYTDKDGNTKS 363
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ S + + A E + ID +
Sbjct: 364 ALNQLGGADGKTEVVSIDGKTYNASKAEGHNFKAQPDLAEAATTTTENPLQKIDAALAQV 423
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 DTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSV 483
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 LAQANQVPQNVLSLLR 499
>gi|187934307|ref|YP_001887601.1| flagellin [Clostridium botulinum B str. Eklund 17B]
gi|187722460|gb|ACD23681.1| flagellin [Clostridium botulinum B str. Eklund 17B]
Length = 459
Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats.
Identities = 72/457 (15%), Positives = 143/457 (31%), Gaps = 9/457 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + N +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNMNAMNAHRNMGMNTVNSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ G + IQ E+ QL++++
Sbjct: 63 QRNSQDGISLIQTAEGALNETHSILQRMRELSVQGANDTNNENDRGQIQKEMDQLRNEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L D + + + K T E +
Sbjct: 123 RISDTTEFNTKKLLNGDSDVKSKLGTALDGNIKVTGASDKTVAGTEFAITKVEEATATKA 182
Query: 181 TDGTERYGLLDRNHKIKVEP------QVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
T +KV K D+ A+ L
Sbjct: 183 TTAIATNADTTDKVTLKVGDKKLELASGTKKEDIVDKVNEFLKKEGIDATASAESNKLVI 242
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
+ +A I A T + +V A I + I +
Sbjct: 243 TSNKVGSDVKLAKITDDSAAKGTEAAATVADGTNAKITVDGVADKIEGKGNTIEINDEIA 302
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA 354
+ ++ + T + + + ++
Sbjct: 303 GAKGLTIDVKSAVTSADTTTGKVTIDSVGMNLQIGANEGQNIALSIGNMSSKELGVDSID 362
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ + V+ I + I +A K+G+ +R+ + + + + R+ D D
Sbjct: 363 VSDAKKSDVAVTTIQSAIDKVSAERSKLGAYQNRLEHTINNLGTSSENLTAAESRVRDVD 422
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E S Q A L+ N +L L R
Sbjct: 423 MAKEMMAFSKNNILSQAAQAMLAQANQQPQGVLQLLR 459
>gi|38049931|gb|AAR10584.1| phase 1 flagellin [Salmonella enterica]
gi|38049933|gb|AAR10585.1| phase 1 flagellin [Salmonella enterica]
gi|50830886|gb|AAT81608.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Muenchen]
Length = 506
Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats.
Identities = 74/503 (14%), Positives = 134/503 (26%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR--------------DDNGKVQITT 165
++ + FNG L D + A I +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKEISSKTLGLDKLNVQDAYTPKE 183
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+D T + T + + DI +
Sbjct: 184 TAVTVDKTTYKNGTDTITAQSNTDIQTAIGGGATGVTGADIKFKDGQYYLDVKGGASAGV 243
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT-------------------- 265
+ D A T
Sbjct: 244 YKATYDETTKKVNIDTTDKTPLATAEATAIRGTATITHNQIAEVTKEGVDTTTVAAQLAA 303
Query: 266 -----------------SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
K+ V ++MG+ K + T +
Sbjct: 304 AGVTGADKDNTSLVKLSFEDKNGKVIDGGYAVKMGDDFYAATYDEKTGTITAKTTTYTDG 363
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
A V T + S + + R E + I
Sbjct: 364 AGVAQTGAVKFGGANGKSEVVTATDGKTYLASDLDKHNFRTGGELKEVNTDKTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|6225353|sp|O52959|FLIC_SALNA RecName: Full=Phase 1 flagellin
gi|2821953|dbj|BAA24529.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Naestved]
Length = 505
Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats.
Identities = 74/502 (14%), Positives = 141/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAVAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T + K + K + + +TT
Sbjct: 244 AVDLFKTTKSAAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGDDGNGKVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 304 EKVTLTVADIAIGAADVNAATLQSSKNVYTSVVNGQFTFDDKTKSESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|1333833|emb|CAA27128.1| unnamed protein product [Salmonella enterica subsp. enterica
serovar Paratyphi A]
Length = 498
Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats.
Identities = 73/491 (14%), Positives = 138/491 (28%), Gaps = 42/491 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 8 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 67
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 68 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 127
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI---------------- 163
++ + FNG L D + A I Q
Sbjct: 128 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 187
Query: 164 -----------------------TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
+T D + + +ST + + +
Sbjct: 188 EVTPSATLSTTALDGAGLKTGTGSTTDTGSIKDGKVYYNSTSKNYYVEVEFTDATDQTNK 247
Query: 201 QVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPN 260
++V+ A + + T +G A + A
Sbjct: 248 GGFYKVNVADDGAVTMTAATTKEATTPTGITEVTQVQKPVAAPAAIQAQLTAAHVTGADT 307
Query: 261 TTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDT 320
+ + AT + T T
Sbjct: 308 AEMVKMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTEYTDKDGNTKTALNQL 367
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
+ S + + A E ++ ID + A
Sbjct: 368 GGADGKTEVVSIDGKTYNASKAAGHNFKAQPELAEAAAATTENPLAKIDAALAQVDAVRS 427
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+ N
Sbjct: 428 DLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQAN 487
Query: 441 NSTARILSLFR 451
+LSL R
Sbjct: 488 QVPQNVLSLLR 498
>gi|120555510|ref|YP_959861.1| flagellin domain-containing protein [Marinobacter aquaeolei VT8]
gi|120325359|gb|ABM19674.1| flagellin domain protein [Marinobacter aquaeolei VT8]
Length = 497
Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats.
Identities = 66/493 (13%), Positives = 151/493 (30%), Gaps = 44/493 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L + R+SSGLR++ A D+AA +IA+ S L+
Sbjct: 5 INTNIASLNAQRNLNASQQDANTTLQRLSSGLRINSAKDDAAGLAIAERFTSQVKGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
G S +A+ + ++ +++ ++ +D K++Q+E+ QL+ +L
Sbjct: 65 VRNSNDGVSLAQVAEGALGESGNILQRMRELAVQAANATNSASDRKALQAEVNQLKQELE 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG L + + + G T + ++ +
Sbjct: 125 RIATTTEFNGLKLLDGTFQAQKFQAGANENQTISVSITGTRIDTLANNTVETIASGSSTG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ G + I+ + + +A + +
Sbjct: 185 SITVASGGTAPALNAIQPQDITISSSLDEQTVNITASGATAESIAAEINKAAETTGVSAS 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY--------------------- 279
+ + +T + + + +
Sbjct: 245 ARTSVELSNLSASGTVTMSLSTGDGNNATVSAQISDVNDLEPLAREINASSGKTGITAEV 304
Query: 280 --------------------IRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
G + T + T+ + A++ +
Sbjct: 305 DGGTIKLIQESGKDVVIEGFTSNGAGSPTMDLTGSSQATAQLATGGNDSARIAGEINFDS 364
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
S + S + + + + +D+ ++
Sbjct: 365 ASSFAVSSTVAGGAGGIFATTDTFGSDPEKVADIDISTFEGASSAMRVLDSALETINGIR 424
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R+ + + + R+ DAD A+ES L+ Q QQ + L+
Sbjct: 425 ADLGAVQNRLESTIANLSTTSENLSAARSRIQDADFAAESANLARTQVLQQAGLSVLAQA 484
Query: 440 NNSTARILSLFRG 452
N ++L L +G
Sbjct: 485 NARPQQVLQLLQG 497
>gi|38049989|gb|AAR10613.1| phase 1 flagellin [Salmonella enterica]
gi|50830904|gb|AAT81617.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Naestved]
Length = 505
Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats.
Identities = 74/502 (14%), Positives = 141/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAVAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T + K + K + + +TT
Sbjct: 244 AVDLFKTTKSAAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGDDGNGKVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 304 EKVTLTVADIAIGAADVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|259907624|ref|YP_002647980.1| Phase 1 flagellin [Erwinia pyrifoliae Ep1/96]
gi|224963246|emb|CAX54730.1| Phase 1 flagellin [Erwinia pyrifoliae Ep1/96]
gi|283477466|emb|CAY73382.1| flagellin, filament structural protein FliC [Erwinia pyrifoliae DSM
12163]
Length = 484
Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats.
Identities = 71/481 (14%), Positives = 149/481 (30%), Gaps = 32/481 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L +L R+SSGLR++ A D+AA +I+ + ++
Sbjct: 4 VINTNALSLMAQTNLNKSQASLGTAIQRLSSGLRINSAKDDAAGQAISNRFTASIEGMTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVM---STIKNKITAGVERGTDSKSIQSEITQLQSQL 119
+ G S + +++ D + + + G +D KS+Q EIT +++
Sbjct: 64 AARNANDGISLAQTTEGALNEINDNLLNIRRLTEQALNGTNSESDKKSVQEEITARLAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA+ + FNG N L I + D D L S
Sbjct: 124 GRIAKDTDFNGVNVLDGSTSQLQIQIGAKDGQTIGIDLPAMDLEKLGLDGYDVTGALASS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T + + + + ++ + + K ++ S
Sbjct: 184 GAKPTLDAAGTPVTGTVTIGGEDIALDPAAMTEIEQAVGAAKGDVSLYSVVEAGKETYYA 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ V L + ++ S A I
Sbjct: 244 FDSTKGKATEVTLKGDGSGKLVSATAGKELSAVDADILVNGPSKLKGEGEVLKAGQEIDL 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T + + +++++ + + + D+G T + E
Sbjct: 304 GGAAHKLTEQDMTEIATAMGGDASSVANMELIGLTDDAGKVSYYAVHTDASGVKTGAEMT 363
Query: 360 AMEEM-----------------------------VSFIDTQIKCATAAAGKIGSISSRIH 390
+ ++ +D+ + + +G++ +R +
Sbjct: 364 LADNAGAIKATKGTDLKAADMQKVGELANGGGGLLATMDSALAQVDSFRSGLGAVQNRFN 423
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + + R++DAD ++E + +S QQ + LS N +LSL
Sbjct: 424 SIISNLNTTVNNMTEAKSRILDADFSAEVSAMSRANILQQAGITVLSQANQVPQNVLSLL 483
Query: 451 R 451
R
Sbjct: 484 R 484
>gi|38050147|gb|AAR10692.1| phase 1 flagellin [Salmonella enterica]
Length = 495
Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats.
Identities = 70/492 (14%), Positives = 134/492 (27%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY----------- 168
++ + FNG L D + A I Q +D
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 169 -----------------------------YLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + ++ + Y +D
Sbjct: 184 EAVTPPAKLDITGLTGADIKTGVDGATVDTGSIKDGKVYYNSTSKDYYVQVDFGTSADAA 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++V+ + + T +G A + A
Sbjct: 244 KSGYYKVNVNDDGTVSMTADTTKEATTPTGITEVTQVQKPVAAPAAIQDQLTAAHVTGAD 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + AT + T T
Sbjct: 304 TAEMVKMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTEYTDKDGNTKTALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E + ID +
Sbjct: 364 LGGADGKTEVVSIDGKTYNASKAAGHDFKAQPDLAEAAATTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|116489748|gb|ABJ98781.1| phase I flagellin deletion variant C5 [Salmonella enterica subsp.
enterica serovar Typhimurium]
Length = 483
Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats.
Identities = 74/480 (15%), Positives = 134/480 (27%), Gaps = 31/480 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI------------------------- 154
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 155 ---RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+D + TD L + K +V
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 212 DASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
K T +G + L AA +
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGGQVANADLTEAKAALTAAGVTGTASVVKMSYTDN 303
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
+ + + D + AT + T T + +
Sbjct: 304 NGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVS 363
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
S + + A E + ID + +G++ +R +
Sbjct: 364 IGGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNS 423
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + R+ D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 AITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 483
>gi|1333822|emb|CAA78775.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Derby]
Length = 504
Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 141/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 122
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 123 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 182
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + + + N ++ +
Sbjct: 183 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAVAPNKVYVNAANGQLTTDDAENNT 242
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 243 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGNDGNGKVSTTING 302
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 303 EKVTLTVADITGGAANVDAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 362
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 363 GESKITVNGAEYTANATGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 422
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 423 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 482
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 483 QAGTSVLAQANQVPQNVLSLLR 504
>gi|238912469|ref|ZP_04656306.1| Flagellin (Phase 1-C flagellin) [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|38050135|gb|AAR10686.1| phase 1 flagellin [Salmonella enterica]
gi|38050137|gb|AAR10687.1| phase 1 flagellin [Salmonella enterica]
gi|38050139|gb|AAR10688.1| phase 1 flagellin [Salmonella enterica]
gi|38050141|gb|AAR10689.1| phase 1 flagellin [Salmonella enterica]
gi|308054711|gb|ADO01402.1| flagellin [Salmonella enterica subsp. enterica]
gi|308054713|gb|ADO01403.1| flagellin [Salmonella enterica subsp. enterica]
gi|308054715|gb|ADO01404.1| flagellin [Salmonella enterica subsp. enterica]
gi|308054799|gb|ADO01446.1| flagellin [Salmonella enterica subsp. houtenae]
gi|308054801|gb|ADO01447.1| flagellin [Salmonella enterica subsp. houtenae]
gi|308054803|gb|ADO01448.1| flagellin [Salmonella enterica subsp. houtenae]
Length = 505
Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats.
Identities = 72/502 (14%), Positives = 139/502 (27%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ S++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELTVQATNGTNSDSDLTSIQNEITQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG--------SFIRDDNGKVQITTIDYYLD 171
++ + FNG L D A +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLKIQVGANDGETISIDLKKIDSKSLGMDGFNVNGAHKATG 183
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ + +T + + ++ L T +
Sbjct: 184 SDLISQFGATGTDNYNVTKGATTTTYSVDIKSGAVTTGTPAEAVFVNAADGSLTTDATTK 243
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT------------- 278
D KG+A + + + + + T
Sbjct: 244 NTEIKGNDDFTKGLADAAKGAVKDSTFTYSGIEFTAKTAGTADGNGTFEAKIDGAVFSFV 303
Query: 279 -----------------------------YIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
++ + + G T +
Sbjct: 304 ITGGTTPSSAVTGAGGAKAYVSKIDGSITTTAEVDNRAAKMSDLDLNNAVKIGSTLNVNG 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
N + D + D + N DA + + + + ID
Sbjct: 364 ATYNVNAKGDEVTGKFDDGAGGLVDKQVFLGKTAGGAATLINEDAAKSQQSTVDPLKTID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ A +G++ +R + + + R+ DAD A+E + +S Q Q
Sbjct: 424 DALAQVDALRSDLGAVQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|602878|emb|CAA58234.1| flagellin [Legionella pneumophila]
Length = 475
Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats.
Identities = 67/470 (14%), Positives = 149/470 (31%), Gaps = 22/470 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++++A + L ++ R+SSGLR++ A D+AA +I+Q M + ++
Sbjct: 4 VINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
G S +A+ M + +++ ++ + SIQSEI+QL+S+L
Sbjct: 64 AVRNANDGISLSQVAEGAMQETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA+ + FNG+ L ++ + + + + T + +
Sbjct: 124 ERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFSIGSIKASSIGGIATATGTEVAGA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI-------------------STK 220
+ I ++ ++ T+
Sbjct: 184 AATDITIAIGGGAATSINSSANFTGALNGQDATSAYAKAAAINDAGIGGLSVTASTSGTQ 243
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ + L + ++ + +
Sbjct: 244 AVGAIGGTAGDTYNLTINGVAIYTNLDVATALTNSDLRDAINGVSNQTGVVASLNGGNMT 303
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+ T + + + + + +D+ + G S
Sbjct: 304 LTAADGRNITVTESGTGFTAGTDGLTVTGGAFDGRLRGTLSISAVDTIAIGGTVANIGLS 363
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T ++ + + + ID + + +G++ +R ++ +
Sbjct: 364 ANISKDTVGIDSLDVSTGSGRQTAIKRIDAALNSVNSNRANMGALQNRFESTIANLENVS 423
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D + R+ DAD A+E L+ Q QQ L+ N+ +LSL
Sbjct: 424 DNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLL 473
>gi|38049979|gb|AAR10608.1| phase 1 flagellin [Salmonella enterica]
Length = 504
Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats.
Identities = 71/501 (14%), Positives = 137/501 (27%), Gaps = 52/501 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDDAAPDKVYVNAANGQLTTDDAQNNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
T K K + + +TT
Sbjct: 244 AVDLFKTTKSAAGTDDAKAIANVIKGGKEGDTFDYKGVSFTIDTKTGNDGNGTVSTTING 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV-------------- 311
+ + + + + + + T +
Sbjct: 304 EKVTLTVADIAGGGSVNDATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKG 363
Query: 312 -GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ K ++ N DA K + ++ ID+
Sbjct: 364 ESKITVNGAEYTANATGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLAAIDS 423
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ A +G+I +R + + R+ DAD A+E + +S Q QQ
Sbjct: 424 ALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQQ 483
Query: 431 LAVQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 AGTSVLAQANQVPQNVLSLLR 504
>gi|22553064|emb|CAD42900.1| flagellin [Fluoribacter bozemanae]
Length = 489
Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats.
Identities = 67/470 (14%), Positives = 149/470 (31%), Gaps = 22/470 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++++A + L ++ R+SSGLR++ A D+AA +I+Q M + ++
Sbjct: 4 VINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
G S +A+ M + +++ ++ + SIQSEI+QL+S+L
Sbjct: 64 AVRNANDGISLSQVAEGAMQETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA+ + FNG+ L ++ + + + + T + +
Sbjct: 124 ERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFSIGSIKASSIGGIATATGTEVAGA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI-------------------STK 220
+ I ++ ++ T+
Sbjct: 184 AATDITIAIGGGAATSINSSANFTGALNGQDATSAYAKAAAINDAGIGGLSVTASTSGTQ 243
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ + L + ++ + +
Sbjct: 244 AVGAIGGTAGDTYNLTINGVAIYTNLDVATALTNSDLRDAINGVSNQTGVVASLNGGNMT 303
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+ T + + + + + +D+ + G S
Sbjct: 304 LTAADGRNITVTESGTGFTAGTDGLTVTGGAFDGALRGTLSISAVDTIAIGGTVANIGLS 363
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T ++ + + + ID + + +G++ +R ++ +
Sbjct: 364 ANISKDTVGIDSLDVSTASGAQTAIKRIDAALNSVNSNRANMGALQNRFESTIANLQNVS 423
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D + R+ DAD A+E L+ Q QQ L+ N+ +LSL
Sbjct: 424 DNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLL 473
>gi|38049939|gb|AAR10588.1| phase 1 flagellin [Salmonella enterica]
Length = 506
Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats.
Identities = 75/503 (14%), Positives = 135/503 (26%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR--------------DDNGKVQITT 165
++ + FNG L D + A I +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKEISSKTLGLDKLNVQDAYTPKE 183
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+D T + T + + DI +
Sbjct: 184 TAVTVDKTTYKNGTDTITAQSNTDIQTAIGGGATGVTGADIKFKDGQYYLDVKGGASAGV 243
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT-------------------- 265
+ D A T
Sbjct: 244 YKATYDETTKKVNIDTTDKTPLATAEATAIRGTATITHNQIAEVTKEGVDTTTVAAQLAA 303
Query: 266 -----------------SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
K+ V ++MG+ K + T +
Sbjct: 304 AGVTGADKDNTSLVKLSFEDKNGKVIDGGYALKMGDDFYAATYDEKTGTITAKTTTYTDG 363
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
A V T + S + + R E + I
Sbjct: 364 AGVAQTGAVKFGGANGKSEVVTATDGKTYLASDLDKHNFRTGGELKEVNTDKTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|38050259|gb|AAR10748.1| phase 1 flagellin [Salmonella enterica]
Length = 504
Score = 219 bits (557), Expect = 8e-55, Method: Composition-based stats.
Identities = 73/501 (14%), Positives = 139/501 (27%), Gaps = 52/501 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGESITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAQNNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
T T K K + + +TT
Sbjct: 244 AVDLFKTTKSTAGTDDAKAIANVIKGGKEGDTFDYKGVSFTIDTKNGNDGNGTVSTTING 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV-------------- 311
+ + R + + + + T +
Sbjct: 304 EKVTLTVADIAGGGSVNDATLQSSRNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKG 363
Query: 312 -GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ K ++ N DA K + ++ ID+
Sbjct: 364 ESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLAAIDS 423
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ A +G+I +R + + + R+ DAD A+E + +S Q QQ
Sbjct: 424 ALSKVDAVRSSLGAIQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSKAQILQQ 483
Query: 431 LAVQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 AGTSVLAQANQVPQNVLSLLR 504
>gi|120314|sp|P06177|FLIC_SALMU RecName: Full=Flagellin; AltName: Full=Phase 1-D flagellin
Length = 505
Score = 219 bits (556), Expect = 8e-55, Method: Composition-based stats.
Identities = 69/502 (13%), Positives = 137/502 (27%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------------------------- 153
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKEISSKTLGLDKLNVQDAYTPKE 183
Query: 154 -------IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
NG IT + ++ D + + V+ +
Sbjct: 184 TAVTVDKTTYKNGTDTITAQSNTDIQTAIGGGATGVTGADIKFKDGQYYLDVKGGASAGV 243
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ YD + T A V +
Sbjct: 244 YKATYDETTKKVNIDTTDKTPLATAEATAIRGTATITHNQIAEVTKEGVDTTTVAAQLAA 303
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + + +++ D + + ++ T
Sbjct: 304 AGVTGADKDNTSLVKLSFEDKNGKVIDGGYAVKMGDDFYAATYDEKQVQLLLNNHYTDGA 363
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME-----------------EMVSFID 369
G + + +T L + ID
Sbjct: 364 GVLQTGAVKFGGANGKSEVVTATVGKTYLASDLDKHNFRTGGELKEVNTDKTENPLQKID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ +G++ +R + + + + R+ D+D A+E + +S Q Q
Sbjct: 424 AALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|312973865|ref|ZP_07788037.1| phase 2 flagellin [Escherichia coli 1827-70]
gi|310332460|gb|EFP99695.1| phase 2 flagellin [Escherichia coli 1827-70]
Length = 486
Score = 219 bits (556), Expect = 8e-55, Method: Composition-based stats.
Identities = 67/483 (13%), Positives = 129/483 (26%), Gaps = 34/483 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SS LR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSSLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ ++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR------------------------ 155
++ + FNG L + A I
Sbjct: 124 DRVSEQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATG 183
Query: 156 -------DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
G V + + + K
Sbjct: 184 SDLISKFKATGTDNYQINGTDNYTVNVDSGAVQNEDGDAIFVSATDGSLTTKSDTKVGGT 243
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + + A + T + +
Sbjct: 244 GIDATGLAKAAVSLAKDASIKYQGITFTNKGTDAFDGSGNGTLTANIDGKDVTFTIDATG 303
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
K ++ S + + T+ N+ + + D +
Sbjct: 304 KDATLKTSDPVYKNSAGQFTTTKVENKAATASDLDLNNAKKVGSSLVVNGADYEVSADGK 363
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
S DA + + ID + +G++ +R
Sbjct: 364 TVTGLGKTMYLSKSEGGSPILVKEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGAVQNR 423
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + R+ DAD A+E + +S Q QQ L+ N +T +LS
Sbjct: 424 FDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQTTQNVLS 483
Query: 449 LFR 451
L R
Sbjct: 484 LLR 486
>gi|308054745|gb|ADO01419.1| flagellin [Salmonella enterica subsp. salamae]
Length = 505
Score = 219 bits (556), Expect = 8e-55, Method: Composition-based stats.
Identities = 72/502 (14%), Positives = 138/502 (27%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ S++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELTVQATNGTNSDSDLTSIQNEITQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG--------SFIRDDNGKVQITTIDYYLD 171
++ + FNG L D A +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLKIQVGANDGETISIDLKKIDSKSLGMDGFNVNGAHKATG 183
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ + +T + + ++ L T +
Sbjct: 184 SDLISQFGATGTDNYNVTKGATTTTYSVDIKSGAVTTGTPAEAVFVNAADGSLTTDATTK 243
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT------------- 278
D KG+A + + + + T
Sbjct: 244 NTEIKGNDDFTKGLADAAKGAVKDSTFTYNGIEFTAKTAGTADGNGTFEAKIDGTVISFE 303
Query: 279 -----------------------------YIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
++ + + G T +
Sbjct: 304 ITGGTTPSSAVTGAGGAKAYVSKIDGSITTTAEVDNRAAKMSDLDLNNAVKIGSTLNVNG 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
N + D + D + N DA + + + + ID
Sbjct: 364 ATYNVNAKGDEVTGKFDDGAGGLVDKQVFLGKTAGGAATLINEDAAKSQQSTVDPLKTID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ A +G++ +R + + + R+ DAD A+E + +S Q Q
Sbjct: 424 DALAQVDALRSDLGAVQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|16760903|ref|NP_456520.1| flagellin [Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
gi|29141405|ref|NP_804747.1| flagellin [Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|213053506|ref|ZP_03346384.1| flagellin [Salmonella enterica subsp. enterica serovar Typhi str.
E00-7866]
gi|213426350|ref|ZP_03359100.1| flagellin [Salmonella enterica subsp. enterica serovar Typhi str.
E02-1180]
gi|213648678|ref|ZP_03378731.1| flagellin [Salmonella enterica subsp. enterica serovar Typhi str.
J185]
gi|213855804|ref|ZP_03384044.1| flagellin [Salmonella enterica subsp. enterica serovar Typhi str.
M223]
gi|289827223|ref|ZP_06545939.1| flagellin [Salmonella enterica subsp. enterica serovar Typhi str.
E98-3139]
gi|25299192|pir||AH0750 flagellin [imported] - Salmonella enterica subsp. enterica serovar
Typhi (strain CT18)
gi|397811|gb|AAA27067.1| flagellin [Salmonella enterica subsp. enterica serovar Typhi]
gi|16503200|emb|CAD05707.1| flagellin [Salmonella enterica subsp. enterica serovar Typhi]
gi|29137032|gb|AAO68596.1| flagellin [Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|38049935|gb|AAR10586.1| phase 1 flagellin [Salmonella enterica]
gi|38049937|gb|AAR10587.1| phase 1 flagellin [Salmonella enterica]
Length = 506
Score = 219 bits (556), Expect = 8e-55, Method: Composition-based stats.
Identities = 72/503 (14%), Positives = 132/503 (26%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR--------------DDNGKVQITT 165
++ + FNG L D + A I +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKEISSKTLGLDKLNVQDAYTPKE 183
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+D T + + + DI +
Sbjct: 184 TAVTVDKTTYKNGTDPITAQSNTDIQTAIGGGATGVTGADIKFKDGQYYLDVKGGASAGV 243
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT-------------------- 265
+ D A T
Sbjct: 244 YKATYDETTKKVNIDTTDKTPLATAEATAIRGTATITHNQIAEVTKEGVDTTTVAAQLAA 303
Query: 266 -----------------SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
K+ V ++MG+ K + T +
Sbjct: 304 AGVTGADKDNTSLVKLSFEDKNGKVIDGGYAVKMGDDFYAATYDEKTGAITAKTTTYTDG 363
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
V T + S + + R E + I
Sbjct: 364 TGVAQTGAVKFGGANGKSEVVTATDGKTYLASDLDKHNFRTGGELKEVNTDKTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|38050053|gb|AAR10645.1| phase 1 flagellin [Salmonella enterica]
gi|38050055|gb|AAR10646.1| phase 1 flagellin [Salmonella enterica]
Length = 419
Score = 219 bits (556), Expect = 9e-55, Method: Composition-based stats.
Identities = 71/452 (15%), Positives = 132/452 (29%), Gaps = 39/452 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I + +T+ LD
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGAN-----------DGETIDIDLKEISSKTLGLDK 172
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
K + D + + + T +
Sbjct: 173 LNVQDAYTPKETAVTVDKTTYKNGTDPITAQSNTDIQTAIGGGATGVTGADKDNTSLVKL 232
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A + + T K+ ++ A T G
Sbjct: 233 SFEDKNGKVIDGGYAVKMGDDFYAATYDEKTGAITAKTTTYTDGTG-------------- 278
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
V T + S + + R
Sbjct: 279 -----------VAQTGAVKFGGANGKSEVVTATDGKTYLASDLDKHNFRTGGELKEVNTD 327
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
E + ID + +G++ +R + + + + R+ D+D A+E
Sbjct: 328 KTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEV 387
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 388 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 419
>gi|297000|emb|CAA78777.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Enteritidis]
Length = 504
Score = 219 bits (556), Expect = 9e-55, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 142/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 122
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 123 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 182
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 183 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAENNT 242
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 243 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGDDGNGKVSTTING 302
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 303 EKVTLTVADIATGATDVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 362
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 363 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 422
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 423 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 482
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 483 QAGTSVLAQANQVPQNVLSLLR 504
>gi|225376513|ref|ZP_03753734.1| hypothetical protein ROSEINA2194_02155 [Roseburia inulinivorans DSM
16841]
gi|225211685|gb|EEG94039.1| hypothetical protein ROSEINA2194_02155 [Roseburia inulinivorans DSM
16841]
Length = 466
Score = 219 bits (556), Expect = 9e-55, Method: Composition-based stats.
Identities = 73/465 (15%), Positives = 133/465 (28%), Gaps = 16/465 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N AM+A++ L +++SSG R++ AAD+AA +I++ M+ L
Sbjct: 2 VVQHNMQAMNANRMLNITTGAQSKSTEKLSSGYRINRAADDAAGLTISEKMRKQIRGLDQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT----DSKSIQSEITQLQSQ 118
S G S V A+ +++ ++ + D ++IQ EI QL ++
Sbjct: 62 ASTNAQDGVSSVQTAEGALTEVHSMLQRMNELAVQAANGTNSKESDRQAIQDEIDQLTTE 121
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ +A + FN L+ D S+ K + T
Sbjct: 122 IDRVAETTKFNEIYLLKGDNASTKNVYMKGHDAGLKGALTDSAKSATFVMDTLKTGDKYK 181
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + + K A +
Sbjct: 182 IAGKEYTIGSSKTEITTAINAFATADNEITIDGISYTYKDANGGKAAGWYKDGDQTNGTA 241
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
A + T + ++ T + T
Sbjct: 242 IVVADTVKGGSKASVNGKDYTAMTDQDANDIDDDDSSVITAAEAKKKIKAELLAANSIGT 301
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA---- 354
+ T S A Y T+ + + +T IT +
Sbjct: 302 VNGDATVSDGADAAGKTTYTITKGYATVADTLSFNLHVGADADMTNKITVDIDVMNSANL 361
Query: 355 --------YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
A V I I ++ +G++ +R+ D + + +
Sbjct: 362 GVKGLNVTDATGTAATYAVDAISDAIAKVSSQRSALGAVQNRLEHTIDNLDNIVENTTTA 421
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D DMA E S Q L+ N ST +LSL +
Sbjct: 422 ESRIRDTDMAEEMVEYSKNNILAQAGQSMLAQANQSTQGVLSLLQ 466
>gi|33590223|gb|AAQ22673.1| flagellin [Escherichia coli]
Length = 488
Score = 219 bits (556), Expect = 9e-55, Method: Composition-based stats.
Identities = 74/486 (15%), Positives = 152/486 (31%), Gaps = 37/486 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ ++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTA---------------------------------SIA 146
++ + FNG L + +
Sbjct: 124 DRVSEQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATG 183
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+I F + Y ++ ++ + +T D + K + +
Sbjct: 184 SDLISKFKATGTDNYDVGGDAYTVNVDSGAVKDTTGNDIFVSAADGSLTTKSDTNIAGTG 243
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ A+ + + T +G A G+ + + + +
Sbjct: 244 IDATALAAAAKNKAQNDKFTFNGVEFTTTTAADGNGNGVYSAEIDGKSVTFTVTDADKKA 303
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + + +A T + + + + V Y V + T+
Sbjct: 304 SLITSETVYKNSAGLYTTTKVDNKAATLSDLDLNAAKKTGSTLVVNGATYDVSADGKTIT 363
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
S N DA + + ID + +G++
Sbjct: 364 E-TASGNNKVMYLSKSEGGSPILVNEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGAVQ 422
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + + + R+ DAD A+E + +S Q QQ L+ N +T +
Sbjct: 423 NRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQTTQNV 482
Query: 447 LSLFRG 452
LSL +G
Sbjct: 483 LSLLQG 488
>gi|38049788|gb|AAR10513.1| phase 2 flagellin [Salmonella enterica]
Length = 495
Score = 219 bits (556), Expect = 9e-55, Method: Composition-based stats.
Identities = 73/492 (14%), Positives = 137/492 (27%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + S
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVKS 183
Query: 180 S----------------------------------------TDGTERYGLLDRNHKIKVE 199
T + + +
Sbjct: 184 EAVTPPATLSTTALDGAGLKTGTGSTTDTGSIKDGKVYYNSTSKDYYVEVEFTDATDQTN 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+ V+ A + + T +G A + A
Sbjct: 244 KGGFYKVKVADDGAVTMTAATTKEATTPTGITEVTQVQKPVAAPAAIQAQLTAAHVTGAD 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + D + AT K + T+ T
Sbjct: 304 TAEMVKMSYTDKNGKTIDGGYAVKVGDDYYAATQKKDGSFSVNTTSYTDKDGNTKSALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E + ID +
Sbjct: 364 LGGVDGKTEVVTINGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|38049913|gb|AAR10575.1| phase 1 flagellin [Salmonella enterica]
gi|308054743|gb|ADO01418.1| flagellin [Salmonella enterica subsp. salamae]
Length = 495
Score = 219 bits (556), Expect = 9e-55, Method: Composition-based stats.
Identities = 69/492 (14%), Positives = 136/492 (27%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------------------------- 153
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLSVQDAYTPKG 183
Query: 154 --------------IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + + K +
Sbjct: 184 TAVTKDVTTYKDGGTTLTAPTAAAIDTALGTTGASGTAAVKFKDGNYFVEVTGTTKNGLY 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+ A+ + T + A A + A
Sbjct: 244 EATVDAAGAVTMTANKSTVTGAGTVTKNQIVDAVTPTPVDTVAAATALTNAGVAGATGNT 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + K+ V + +++GN K + T
Sbjct: 304 SLVKMSFEDKNGKVTDAGYALKVGNDYYAADYDEKTGEIKAKTVNYTDATGATKTGAVKF 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S V + + + E ++ ID + A
Sbjct: 364 GGANGKTEVVTTVDGNTYQASDVKGHNFQSGGALSEAVTTKTENPLAKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|1706835|sp|Q06970|FLIC_SALDE RecName: Full=Flagellin; AltName: Full=Phase 1-C flagellin
gi|476254|gb|AAA17866.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Derby]
gi|38049947|gb|AAR10592.1| phase 1 flagellin [Salmonella enterica]
gi|38049949|gb|AAR10593.1| phase 1 flagellin [Salmonella enterica]
gi|50830898|gb|AAT81614.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Derby]
Length = 505
Score = 219 bits (556), Expect = 9e-55, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 141/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + + + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAVAPNKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 244 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGNDGNGKVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 304 EKVTLTVADITGGAANVDAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANATGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|38049901|gb|AAR10569.1| phase 1 flagellin [Salmonella enterica]
Length = 495
Score = 219 bits (556), Expect = 1e-54, Method: Composition-based stats.
Identities = 73/492 (14%), Positives = 138/492 (28%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI---------------- 163
++ + FNG L D + A I Q
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 164 ------------------------TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+T D + + +ST + + +
Sbjct: 184 EAVTPSATLSTTALDGAGLKTGTGSTTDTGSIKDGKVYYNSTSKNYYVEVEFTDATDQTN 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++V+ A + + T +G A + A
Sbjct: 244 KGGFYKVNVADDGAVTMTAATTKEPTTPTGITEVTQVQKPVAAPAAIQAQLTAAHVTGAD 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + AT + T T
Sbjct: 304 TAEMVKMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTEYTDKDGNTKTALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E ++ ID + A
Sbjct: 364 LGGADGKTEVVSIDGKTYNASKAAGHNFKAQPELAEAAAATTENPLAKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|38049790|gb|AAR10514.1| phase 2 flagellin [Salmonella enterica]
Length = 506
Score = 219 bits (556), Expect = 1e-54, Method: Composition-based stats.
Identities = 74/503 (14%), Positives = 134/503 (26%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR--------------DDNGKVQITT 165
++ + FNG L D + A I +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKEISSKTLGLDKLNVQDAYTPKE 183
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+D T + T + + DI +
Sbjct: 184 TAVTVDKTTYKNGTDTITAQSNTDIQTAIGGGATGVTGADIKFKDGQYYLDVKGGASAGV 243
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT-------------------- 265
+ D A T
Sbjct: 244 YKATYDETTKKVNIDTTDKTPLATAEATAIRGTATITHNQIAKVTKEGVDTTTVAAQLAA 303
Query: 266 -----------------SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
K+ V ++MG+ K + T +
Sbjct: 304 AGVTGADKNNTSLVKLSFEDKNGKVIDGGYAVKMGDDFYAATYDEKTGTITAKTTTYTDG 363
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
V T + S + + R E + I
Sbjct: 364 TGVAQTGAVKFGGANGKSEVVTATDGKTYLASDLDKHNFRTGGELKEVNTDKTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|38050007|gb|AAR10622.1| phase 1 flagellin [Salmonella enterica]
Length = 508
Score = 219 bits (556), Expect = 1e-54, Method: Composition-based stats.
Identities = 81/505 (16%), Positives = 148/505 (29%), Gaps = 56/505 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ Y +D + + + T + N
Sbjct: 184 GDLKSSFKNVTGYDTYAVGANKYRVDVNSGAVVTDTTAPTVPDKVYVNAANGQLTTADAQ 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
+ +V T S A +K + + + A T S T
Sbjct: 244 NNTAVDLFKSTKSVAGTDDAKAIATSIKGGKVGDTFDYKGVSFTIDIKAGDDGNGTVSTT 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN------------ 313
+ ++ S + + + ++K+ TS + K N
Sbjct: 304 INGEKVTLTISDIGVGAADVNSAKIQSSKDVYTSVVSGQFTFADKTKNESAKLSDLEANN 363
Query: 314 -------THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ K ++ N DA K + ++
Sbjct: 364 AVKGESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLA 423
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
ID+ + A +G+I +R + + R+ DAD A+E + +S Q
Sbjct: 424 SIDSALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQ 483
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 ILQQAGTSVLAQANQVPQNVLSLLR 508
>gi|297005|emb|CAA78794.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Moscow]
Length = 504
Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 142/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 122
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 123 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 182
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 183 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAENNT 242
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 243 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGDGGNGKVSTTING 302
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 303 EKVTLTVADIATGATNVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 362
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 363 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 422
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 423 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 482
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 483 QAGTSVLAQANQVPQNVLSLLR 504
>gi|38049973|gb|AAR10605.1| phase 1 flagellin [Salmonella enterica]
gi|38049995|gb|AAR10616.1| phase 1 flagellin [Salmonella enterica]
Length = 505
Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 142/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 244 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGDGGNGKVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 304 EKVTLTVADIATGATDVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|188589598|ref|YP_001922544.1| flagellin [Clostridium botulinum E3 str. Alaska E43]
gi|188499879|gb|ACD53015.1| flagellin [Clostridium botulinum E3 str. Alaska E43]
Length = 452
Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats.
Identities = 71/451 (15%), Positives = 142/451 (31%), Gaps = 4/451 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + N +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNMNAMNAHRNMGMNTVNSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ G + IQ E+ QL S+L
Sbjct: 63 SRNGQDGISMIQTAEGALNETHSILQRMRELGVQGANDTNNEADRGQIQKEMEQLTSELD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN + L + + + + K +I D
Sbjct: 123 RIGNTTEFNTKKLLNGETNVKSTVEDNLAGKLNVVGSSDKTKIDAEITITDSTVATAAKV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
E + + + +++ A S L +
Sbjct: 183 NGIGEALVSNKVVSTDNGKVLEINGVKITLATDDTVDMLNDKLRAAGSDVVLSEDGTSHK 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A A TT + SV + + + N+
Sbjct: 243 LVATSADKGSDAKLAVKLAGTTINQTDGVDASVTIEGKTYTGKGDFVTLDSKAGNAEGLK 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + VD+ L + + + ++ ++ +
Sbjct: 303 LEVKEAVTSLTAKNKIKVDSVGANLQIGANEGQN-IALSIGDMRAKALGVDSIDVSDAKS 361
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ V+ I I + K+G+ +R+ + + + + R+ D DMA E
Sbjct: 362 SDKSVTTIQKAIDQVSTERSKLGAYQNRLEHTINNLGTASENLSAAESRIRDVDMAKEMM 421
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A L+ N +L L R
Sbjct: 422 NFSKNNILSQAAQAMLAQANQQPQGVLQLLR 452
>gi|197249453|ref|YP_002146066.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|38049953|gb|AAR10595.1| phase 1 flagellin [Salmonella enterica]
gi|38049955|gb|AAR10596.1| phase 1 flagellin [Salmonella enterica]
gi|38049957|gb|AAR10597.1| phase 1 flagellin [Salmonella enterica]
gi|50830894|gb|AAT81612.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Agona]
gi|197213156|gb|ACH50553.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
Length = 505
Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 142/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDDAAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 244 AVNLFKTTKSTAGTDEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGNDGNGKVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 304 EKVTLTVADITGGAANVDAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANATGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|297056|emb|CAA78773.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Berta]
Length = 507
Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats.
Identities = 83/505 (16%), Positives = 146/505 (28%), Gaps = 56/505 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 122
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A++
Sbjct: 123 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 182
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ Y +D + + + T + N +
Sbjct: 183 GDLKSSFKNVTGYDTYAVGANKYRVDVNSGAVVTDTTAPTVPDKVYVNAANGQLTTDDAE 242
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
+ +V T ST A +K T + S T
Sbjct: 243 NNTAVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGNDGNGKVSTT 302
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN------------ 313
+ ++ + N D ++KN TS + K N
Sbjct: 303 INGEKVTLTVADITAGAANVDAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANN 362
Query: 314 -------THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ K ++ N DA K + ++
Sbjct: 363 AVKGESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLA 422
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
ID+ + A +G+I +R + + R+ DAD A+E + +S Q
Sbjct: 423 SIDSALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQ 482
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 483 ILQQAGTSVLAQANQVPQNVLSLLR 507
>gi|300114791|ref|YP_003761366.1| flagellin domain-containing protein [Nitrosococcus watsonii C-113]
gi|299540728|gb|ADJ29045.1| flagellin domain protein [Nitrosococcus watsonii C-113]
Length = 485
Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats.
Identities = 77/482 (15%), Positives = 149/482 (30%), Gaps = 33/482 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I TN ++++A + L L+ +R+SSGLR+++A D+AA +I + M S L+
Sbjct: 4 TINTNIASLNAQRNLNSSQNALQTSMERLSSGLRINNAKDDAAGLAITERMTSQIRGLAQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
S A+ G+ ++ +++ ++ D ++Q E++QLQ +L
Sbjct: 64 AGRNANDAISVTQTAEGGLKESSNILQRMRELAVQSANDTNSDADRANLQKEVSQLQKEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------------IRDDNGKVQITTI 166
+A ++FNG+N L I + S + G T
Sbjct: 124 NRLADSTTFNGKNLLDGSFTGQKFQIGANANESIGFSINSARATTLGEQLGKGIANAGTG 183
Query: 167 DYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
T + G + K I V SG +
Sbjct: 184 LAVATDTTGGNTVAAQNITVNGSTGSKSVALTGNESAKAIADLVNGQSGATGVTASAQTS 243
Query: 227 TSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD 286
+ + + A + T+ + S T N D
Sbjct: 244 VKLDNVADDGTVSFTLQSSGGSAAQISAGVTTTDVTNLADAINAQSAETGVTATLSENRD 303
Query: 287 IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI 346
+ N+ + V E T D + ++
Sbjct: 304 SITLENAQGEDILISEANNTGASGNAFNVGGVTVEDTGGDDSIVVGGQVSFQSDKSFTVT 363
Query: 347 TRHANTDAY-----------------NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRI 389
+ + + +S ID + +G++ +R
Sbjct: 364 SDDGTNTVVGAGGVTSALSSVAQIDLSTQDGSNSALSVIDKALGSIATQRADLGALQNRF 423
Query: 390 HLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
++ + + R+ DAD A+E+ ++ + QQ L+ N +LSL
Sbjct: 424 ESTISNLENVSENTSAARSRIQDADFAAETAEMTRNKILQQAGTAMLAQANAQPQGVLSL 483
Query: 450 FR 451
R
Sbjct: 484 LR 485
>gi|154012|gb|AAA27090.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Dublin]
Length = 505
Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 142/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 244 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGDDGNGKVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 304 EKVTLTVADIATGAADVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|205352347|ref|YP_002226148.1| flagellin [Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|207856528|ref|YP_002243179.1| flagellin [Salmonella enterica subsp. enterica serovar Enteritidis
str. P125109]
gi|1706837|sp|Q06972|FLIC_SALEN RecName: Full=Flagellin; AltName: Full=Phase 1-C flagellin
gi|153995|gb|AAA17492.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Enteritidis]
gi|154004|gb|AAA27086.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Gallinarum]
gi|154014|gb|AAA27091.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum]
gi|38049959|gb|AAR10598.1| phase 1 flagellin [Salmonella enterica]
gi|38049961|gb|AAR10599.1| phase 1 flagellin [Salmonella enterica]
gi|38049963|gb|AAR10600.1| phase 1 flagellin [Salmonella enterica]
gi|38049965|gb|AAR10601.1| phase 1 flagellin [Salmonella enterica]
gi|50830902|gb|AAT81616.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Enteritidis]
gi|50830966|gb|AAT81648.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Emek]
gi|205272128|emb|CAR36981.1| flagellin [Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|206708331|emb|CAR32634.1| flagellin [Salmonella enterica subsp. enterica serovar Enteritidis
str. P125109]
gi|308054695|gb|ADO01394.1| flagellin [Salmonella enterica subsp. enterica]
gi|326627397|gb|EGE33740.1| flagellin [Salmonella enterica subsp. enterica serovar Gallinarum
str. 9]
Length = 505
Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 142/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 244 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGDDGNGKVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 304 EKVTLTVADIATGATDVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|319764521|ref|YP_004128458.1| flagellin domain protein [Alicycliphilus denitrificans BC]
gi|330826737|ref|YP_004390040.1| flagellin domain-containing protein [Alicycliphilus denitrificans
K601]
gi|317119082|gb|ADV01571.1| flagellin domain protein [Alicycliphilus denitrificans BC]
gi|329312109|gb|AEB86524.1| flagellin domain protein [Alicycliphilus denitrificans K601]
Length = 489
Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats.
Identities = 73/487 (14%), Positives = 154/487 (31%), Gaps = 37/487 (7%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I TN ++++A + L +L R+SSGLR++ A D+AA +I++ S L+
Sbjct: 3 STINTNVASLTAQRNLGVSQNSLNTSIQRLSSGLRINSAKDDAAGLAISERFTSQIRGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S +A+ ++ + +++ ++ +D K+IQ+E+ QL S+
Sbjct: 63 QAARNANDGISLAQVAEGALAGSGNILQRVRELAVQSANATNSASDRKAIQAEVGQLLSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I+ + FNG+ L GS+T + + + +V
Sbjct: 123 LDRISVTTEFNGQKLLDGSFGSATFQVGANANQTITATTANFRTTIYGAQLSASASVQAT 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQ----------------------------------VLK 204
++ + ++ + K
Sbjct: 183 ATAPASGAATVIVNGLQSKTVNVDAADTAAKIAAAVNAVADTTGVTASARNVTELKLTTF 242
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
T + T L A F+ I + A+ +
Sbjct: 243 GSFALAVKGDDTTTASTITFNATDAKDLAGAVKAFNDVSSKTGITAKVNASGDGLLLIND 302
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ + + ++ + + + AT + S
Sbjct: 303 SGANIDITNNSATGQGALTMASLDAVATAAATDGSLKFVATPLAVAANGGTGVSRGTVEF 362
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+ + + NT + + + ID+ + G+
Sbjct: 363 ASDKGFSLGGSSTFIGAGGPSTLNSVNTIDVSTVEGSTKALKIIDSALAAVNGQRANFGA 422
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
+ SR + + + + R+ DAD A+E+ LS Q QQ ++ N
Sbjct: 423 LQSRFETTIANLNVSSENMSASRSRIQDADFAAETANLSRTQILQQAGTAMVAQANQIPQ 482
Query: 445 RILSLFR 451
+LSL +
Sbjct: 483 GVLSLLK 489
>gi|38050017|gb|AAR10627.1| phase 1 flagellin [Salmonella enterica]
gi|38050019|gb|AAR10628.1| phase 1 flagellin [Salmonella enterica]
Length = 504
Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats.
Identities = 72/501 (14%), Positives = 138/501 (27%), Gaps = 52/501 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
T K K + + +TT
Sbjct: 244 AVDLFKTTKSAAGTADAKAIANVIKGGKEGDTFDYKGVSFTIDTKTGNDGNGTVSTTING 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV-------------- 311
+ + R +++ + + T +
Sbjct: 304 EKVTLTVADITGGGSVNDATLQSSRNVYTSAVNGQFTFDDKTKNESAKLSDLEANNAVKG 363
Query: 312 -GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ K ++ N DA K + ++ ID+
Sbjct: 364 ESKITVNGAEYTANAAGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLAAIDS 423
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ A +G+I +R + + R+ DAD A+E + +S Q QQ
Sbjct: 424 ALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQQ 483
Query: 431 LAVQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 AGTSVLAQANQVPQNVLSLLR 504
>gi|38050215|gb|AAR10726.1| phase 1 flagellin [Salmonella enterica]
Length = 499
Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 75/497 (15%), Positives = 140/497 (28%), Gaps = 49/497 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D T + + + D ++ Y + + S
Sbjct: 124 DRVSGQTQFNGVKVLAQDNT-LTIQVGANDGETIDIDLKDQLSDPGSGYAEWQKKYDVKS 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ L + S A ++ A
Sbjct: 183 EAVKSGGGATLSTTGLNDAALKTGVGGATSGTAAIKDNKVFFDATDNKYFIEVEGLTAGD 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW----------- 288
G+ + V P TT G + + A + T +
Sbjct: 243 AAKNGVYEVSVADDGTVTMPATTKVAGGMPATAAAVTETQPKPVALSTEVKAQLTDSGIS 302
Query: 289 ----------------------------------VRATTKNSITSDPGYTNSTVAKVGNT 314
AT + T T
Sbjct: 303 AADAAKGQLVTMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSISINTTKYTDKDGNTK 362
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + S + + A E + ID +
Sbjct: 363 SALNHWVAQDGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAATTTTENPLQKIDAALAQ 422
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 423 VDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTS 482
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 483 VLAQANQVPQNVLSLLR 499
>gi|116489762|gb|ABJ98788.1| phase I flagellin middle domain variant C70 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 477
Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 75/474 (15%), Positives = 139/474 (29%), Gaps = 25/474 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR-----------DDNGKVQITTIDY 168
++ + FNG L D + A I D Q +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
T D++ + ++ D+
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
G + + + T + A +G + +Y I
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATQVANADLTEAKAALTAAGVTGTASVVKMSYTDNNGKTID 303
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP-----------KEIDS 337
K N + NT Y + T+ + L
Sbjct: 304 GGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTY 363
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
S + + A E + ID + +G++ +R + +
Sbjct: 364 AASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLG 423
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R+ D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 424 NTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 477
>gi|38050207|gb|AAR10722.1| phase 1 flagellin [Salmonella enterica]
Length = 496
Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 67/493 (13%), Positives = 131/493 (26%), Gaps = 44/493 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ ++
Sbjct: 184 KAVTATLDLDVTDLDTNALKTATGISAGNPAVKDDKVYYDSANNNYYVEVEGFTDNTKDG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A T + + + A ++ +
Sbjct: 244 FYKVQVGDDGKVSMATTTNKETATPPGIVEVSKTHDEKALKASAEVKAALIAGDIDTADA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN--- 356
D N + + + G V + + +
Sbjct: 304 DAAEMVKMSYTDKNGKTIDGGYAVKVGDNYYAATQKKDGSFSVNTTSYTDKDGNTKSALN 363
Query: 357 --------------------------------------EKLAMEEMVSFIDTQIKCATAA 378
E + ID + A
Sbjct: 364 QLGGADGKTEVVSIDGKTYNASKAAGHNFKAQPDLAEAATATTENPLQKIDAALAQVDAL 423
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 RSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQ 483
Query: 439 VNNSTARILSLFR 451
N +LSL R
Sbjct: 484 ANQVPQNVLSLLR 496
>gi|555640|gb|AAA53492.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Enteritidis var. chaco]
gi|555644|gb|AAA53494.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Essen]
gi|555646|gb|AAA53495.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Enteritidis var. jena]
Length = 504
Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 142/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 122
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 123 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 182
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 183 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAENNT 242
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 243 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGNDGNGKVSTTING 302
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 303 EKVTLTVADIATGATDVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 362
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 363 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 422
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 423 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 482
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 483 QAGTSVLAQANQVPQNVLSLLR 504
>gi|38049890|gb|AAR10564.1| phase 2 flagellin [Salmonella enterica]
gi|308054783|gb|ADO01438.1| flagellin [Salmonella enterica subsp. diarizonae]
Length = 500
Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 71/497 (14%), Positives = 138/497 (27%), Gaps = 48/497 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVDS 183
Query: 180 STDGT----ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
+ L + ++K + + T
Sbjct: 184 KAVTVAANLDITDLNKDAALKAGTGATTGTAAIKDGKVYYDSASKNYYVEVTGLTTPDDG 243
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
F + V + A A + + + + +++
Sbjct: 244 KNGFYKVNVADDGKVSMTAGTAMEAGKPAGAVEVTKTQEEKNPLPLSTDLKTSLKSGGIT 303
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
N + + + G V A+
Sbjct: 304 DPEIAAAQVVKMSYTDKNGKTIDGGYAVKVGDNYYAATQKKDGSFSVNTTSYTAADGTTK 363
Query: 356 N-----------------------------------------EKLAMEEMVSFIDTQIKC 374
E + ID +
Sbjct: 364 TALNQLGGADGKTEVVSIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQ 423
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 VDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTS 483
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 VLAQANQVPQNVLSLLR 500
>gi|322674090|gb|EFY70184.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 414877]
gi|322683031|gb|EFY79047.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 413180]
gi|322686725|gb|EFY82703.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 446600]
Length = 505
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 74/502 (14%), Positives = 141/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGANKYRVDINSGAVVTDDAAPDKVYVNAANGQLTTDDAEKNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T + K + K + + +TT
Sbjct: 244 AVNLFKTTKSAAGTDEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGDDGNGKVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 304 EKVTLTVADIATGATDVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|38049971|gb|AAR10604.1| phase 1 flagellin [Salmonella enterica]
Length = 505
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 74/502 (14%), Positives = 141/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGANKYRVDINSGAVVTDDAAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T + K + K + + +TT
Sbjct: 244 AVNLFKTTKSAAGTDEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGDDGNGKVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 304 EKVTLTVADIAIGATDVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|38050121|gb|AAR10679.1| phase 1 flagellin [Salmonella enterica]
Length = 499
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 74/496 (14%), Positives = 134/496 (27%), Gaps = 47/496 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ V S G + A T
Sbjct: 184 KAVTGVSTLDTTGLTGTDIKTGVDGATTTSGSIKDGKVYYDGATKNYYVEVDFSDAADTA 243
Query: 240 DQAKGIATIPVPLP--------------------------------------------AA 255
+ A
Sbjct: 244 KNGYYKVNVADDGTVTMGASTTKEPAKPAGVVEVTKTQEEKAIKASAEVKAALTAGGVDA 303
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
+ + D + AT K + T+ T
Sbjct: 304 ADVATAEMVKMSYTDKNGKTIDGGYAVKVGDSYYAATQKKDGSFSVNTTSYTDKDGNTKS 363
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ S + + A E + ID +
Sbjct: 364 ALNQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQV 423
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 DALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSV 483
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 LAQANQVPQNVLSLLR 499
>gi|1706838|sp|Q06981|FLIC_SALMC RecName: Full=Flagellin; AltName: Full=Phase 1-D flagellin
gi|38049993|gb|AAR10615.1| phase 1 flagellin [Salmonella enterica]
gi|50830910|gb|AAT81620.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Moscow]
Length = 505
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 142/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 244 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGDGGNGKVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 304 EKVTLTVADIATGATNVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|291527849|emb|CBK93435.1| Flagellin and related hook-associated proteins [Eubacterium rectale
M104/1]
Length = 458
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 76/457 (16%), Positives = 143/457 (31%), Gaps = 8/457 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N AM+A++ L +++SSG R++ AAD+AA +I++ M+ L
Sbjct: 2 VVQHNMQAMNANRMLNVTTSAQSKSTEKLSSGYRINRAADDAAGLTISEKMRKQIRGLDQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT----DSKSIQSEITQLQSQ 118
S G S V A+ +++ ++ + T D ++IQ EI QL ++
Sbjct: 62 ASTNAQDGVSSVQTAEGALTEVHSMLQRMNELATQAANGTNSKDSDRQAIQDEIDQLTTE 121
Query: 119 LRDIARGSSFNGENWLRTDLG----SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
+ ++ + FN L+ D G + G+ + + T
Sbjct: 122 IDRVSETTKFNETYLLKGDKGATKNVYMNGHDAGLKGTLTDSAKSATFVMDELKAGNKVT 181
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ + G+ K +V D + + K
Sbjct: 182 IAGKEYSIGSTVADAKASYAKAADGDKVTIDGTEYTVVGATGTEDAGANKLKVTSLDAKV 241
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
+ + K + + S + N A T
Sbjct: 242 KDGSVVSYKTSKLTVMTDKDNDGVDDDDSSVISKDIAEGKIVSELTAANNIGTVNHAATV 301
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA 354
T+D T + + K S SM + ++
Sbjct: 302 AKATADGKTTYTISKGYATVADTLSFNLHVGADADMTNKINVSIDSMDSASLGIKGLNIK 361
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ A V I I ++ +G++ +R+ + + + + R+ D D
Sbjct: 362 DDSGNAATYAVDAISDAISKVSSQRSSLGAVQNRLEHTINNLDNVVENTTTAESRIRDTD 421
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MASE S Q L+ N ST +LSL +
Sbjct: 422 MASEMVNYSKNNILAQAGQSMLAQANQSTQGVLSLLQ 458
>gi|96748|pir||S07276 flagellin H-1A - Salmonella typhimurium
Length = 494
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 73/491 (14%), Positives = 138/491 (28%), Gaps = 42/491 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI---------------- 163
++ + FNG L D + A I Q
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 164 -----------------------TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
+T D + + +ST + + +
Sbjct: 184 EVTPSATLSTTALDGAGLKTGTGSTTDTGSIKDGKVYYNSTSKNYYVEVEFTDATDQTNK 243
Query: 201 QVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPN 260
++V+ A + + T +G A + A
Sbjct: 244 GGFYKVNVADDGAVTMTAATTKEATTPTGITEVTQVQKPVAAPAAIQAQLTAAHVTGADT 303
Query: 261 TTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDT 320
+ + AT + T T
Sbjct: 304 AEMVKMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTEYTDKDGNTKTALNQL 363
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
+ S + + A E ++ ID + A
Sbjct: 364 GGADGKTEVVSIDGKTYNASKAAGHNFKAQPELAEAAAATTENPLAKIDAALAQVDAVRS 423
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+ N
Sbjct: 424 DLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQAN 483
Query: 441 NSTARILSLFR 451
+LSL R
Sbjct: 484 QVPQNVLSLLR 494
>gi|38050143|gb|AAR10690.1| phase 1 flagellin [Salmonella enterica]
gi|308054753|gb|ADO01423.1| flagellin [Salmonella enterica subsp. arizonae]
gi|308054755|gb|ADO01424.1| flagellin [Salmonella enterica subsp. arizonae]
gi|308054757|gb|ADO01425.1| flagellin [Salmonella enterica subsp. arizonae]
gi|308054759|gb|ADO01426.1| flagellin [Salmonella enterica subsp. arizonae]
Length = 505
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 73/502 (14%), Positives = 140/502 (27%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ S++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELTVQATNGTNSDSDLTSIQNEITQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG--------SFIRDDNGKVQITTIDYYLD 171
++ + FNG L D A +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLKIQVGANDGETISIDLKKIDSKSLGMDGFNVNGAHKATG 183
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ + +T + + ++ L T +
Sbjct: 184 SDLISQFGATGTDNYNVTKGATTTTYSVDIKSGAVTTGTPAEAVFVNAADGSLTTDATTK 243
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT------------- 278
N D KG+A + + + + + T
Sbjct: 244 NTEINGNDDFTKGLADAAKGAVKDSTFTYSGIEFTAKTAGTADGNGTFEAKIDGTVISFE 303
Query: 279 -----------------------------YIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
++ + + G T +
Sbjct: 304 ITGGTTPSSAVTGAGGAKAYVSKIDGSITTTAEVDNRAAKMSDLDLNNAVKIGSTLNVNG 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
N + D + D+ + N DA + + + + ID
Sbjct: 364 ATYNVNAKGDEVTGKFDNGAGGLVDKQVFLGKTAGGAATLINEDAAKSQQSTVDPLKTID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ A +G++ +R + + + R+ DAD A+E + +S Q Q
Sbjct: 424 DALAQVDALRSDLGAVQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQSVLSLLR 505
>gi|38050005|gb|AAR10621.1| phase 1 flagellin [Salmonella enterica]
Length = 508
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 81/505 (16%), Positives = 148/505 (29%), Gaps = 56/505 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ Y +D + + + T + N
Sbjct: 184 GDLKSSFKNVTGYDTYAVGANKYRVDVNSGAVVTDTTAPTVPDKVYVNAANGQLTTADAQ 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
+ +V T S A +K + + + A T S T
Sbjct: 244 NNTAVDLFKSTKSVAGTDDAKAIATSIKGGKVGDTFDYKGVSFTIDIKAGDDGNGTVSTT 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN------------ 313
+ ++ S + + + ++K+ TS + K N
Sbjct: 304 INGEKVTLTISDISVGAADVNSAKIQSSKDVYTSVVSGQFTFADKTKNESAKLSDLEANN 363
Query: 314 -------THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ K ++ N DA K + ++
Sbjct: 364 AVKGESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLA 423
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
ID+ + A +G+I +R + + R+ DAD A+E + +S Q
Sbjct: 424 SIDSALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQ 483
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 ILQQAGTSVLAQANQVPQNVLSLLR 508
>gi|50830960|gb|AAT81645.1| phase 1 flagellin [Salmonella bongori serovar 66:z41:-]
Length = 496
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 68/493 (13%), Positives = 131/493 (26%), Gaps = 44/493 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ ++
Sbjct: 184 KAVTATLDLDVTDLDTNALKTATGISAGNPAVKDDKVYYDSANNNYYVEVEGFTDNTKDG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A T + + + A ++ +
Sbjct: 244 FYKVQVGDDGKVSMATTTNKETATPPGIVEVSKTHDEKALKASAEVKAALIAGNIDTADA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN--- 356
D N + + + G V + + +
Sbjct: 304 DAAEMVKMSYTDKNGKTIDGGYAVKVGDNYYAATQKKDGSFSVNTTSYTDKDGNTKSALN 363
Query: 357 --------------------------------------EKLAMEEMVSFIDTQIKCATAA 378
E + ID + A
Sbjct: 364 QLGGVDGKTEVVTIDGKTYNASKAEGHNFKAQPELAEAATATTENPLQKIDAALAQVDAL 423
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 RSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQ 483
Query: 439 VNNSTARILSLFR 451
N +LSL R
Sbjct: 484 ANQVPQNVLSLLR 496
>gi|22553052|emb|CAD42893.1| flagellin [Legionella pneumophila serogroup 6]
Length = 493
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 65/463 (14%), Positives = 145/463 (31%), Gaps = 22/463 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++++A + L ++ R+SSGLR++ A D+AA +I+Q M + ++
Sbjct: 4 VINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
G S +A+ M + +++ ++ + SIQSEI+QL+S+L
Sbjct: 64 AVRNANDGISLAQVAEGAMQETTNILQRMRELSVQAANSTNNSSDRSSIQSEISQLKSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA+ + FNG+ L ++ + + + + T + +
Sbjct: 124 ERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFSIGSTKASSIGGIATATGTEVAGA 183
Query: 180 STDG-------------------TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ D + + + T T+
Sbjct: 184 AAQILLSQLEEEQQPVLTLLPILPGHLNGQDATSAYAKAAAINDAGIGGLSVTASTSGTQ 243
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ + L + ++ + +
Sbjct: 244 AVGAIGGTAGDTYNLTINGVAIYTNLNVATALTNSDLRDAINGVSNQTGVVASLNGGNMT 303
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+ T + + + + + +D+ + G S
Sbjct: 304 LTAADGRNITVTESGTGFTAGTDGLTVTGGAFDGALRGTLSISAVDTIAIGGTVANIGLS 363
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T ++ + + + ID + + +G++ +R ++ +
Sbjct: 364 ANISKDTVGIDSLDVSTASGAQTAIKRIDAALNSVNSNRANMGALQNRFESTIANLQNVS 423
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
D + R+ DAD A+E L+ Q QQ L+ N+
Sbjct: 424 DNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLP 466
>gi|297003|emb|CAA78778.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Montevideo]
Length = 504
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 74/502 (14%), Positives = 141/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 122
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 123 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 182
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 183 GDLKSSFKNVTGYDTYAAGANKYRVDINSGAVVTDDAAPDKVYVNAANGQLTTDDAENNT 242
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T + K + K + + +TT
Sbjct: 243 AVNLFKTTKSAAGTDEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGDDGNGKVSTTING 302
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 303 EKVTLTVADIATGATDVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 362
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 363 GESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 422
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 423 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 482
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 483 QAGTSVLAQANQVPQNVLSLLR 504
>gi|38050101|gb|AAR10669.1| phase 1 flagellin [Salmonella enterica]
Length = 493
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 81/490 (16%), Positives = 147/490 (30%), Gaps = 41/490 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR------------------------ 155
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 156 ---DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYD 212
G + T + + DG + D + I+VE D +
Sbjct: 184 EAVKSGGGATLNTTGLNVGGAANGTAAIKDGKVFFDATDNKYFIEVEGLTAGDATKNGVY 243
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ TT+ + A + ++ +
Sbjct: 244 EVSVADDGTVTMPTTTKVTGGMPATATAVTETQPKPVALSTAVKDQLTDSGISAADAAKG 303
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ +Y I K N + NT Y D T + L
Sbjct: 304 QLVTMSYTDKNGKTIDGGFGVKVGANIYAATKNKDGSFSINTTEYTDKGGNTKTALNQLG 363
Query: 333 KEIDSGYSMVTLNITRHANTD-----------AYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ T +A+ A E ++ ID + A
Sbjct: 364 GADGKTEVVSIDGKTYNASKAAGHNFKAQPELAEAAATTTENPLAKIDAALAQVDALRSD 423
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+ N
Sbjct: 424 LGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQ 483
Query: 442 STARILSLFR 451
+LSL R
Sbjct: 484 VPQNVLSLLR 493
>gi|221069304|ref|ZP_03545409.1| flagellin domain protein [Comamonas testosteroni KF-1]
gi|220714327|gb|EED69695.1| flagellin domain protein [Comamonas testosteroni KF-1]
Length = 469
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 78/466 (16%), Positives = 149/466 (31%), Gaps = 17/466 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I TN +++A + L +L R+SSGLR++ A D+AA +I++ M S L+
Sbjct: 4 TINTNIQSLNAQRNLGTSQSSLSTSMQRLSSGLRINSAKDDAAGMAISERMTSQIRGLNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ + + + I+ +D ++Q E+TQL ++
Sbjct: 64 AQRNANDGVSLAQTAEGALGTIGNNLQRIRELAVQSANATNSDSDRAALQKEVTQLSEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN--------GKVQITTIDYYLD 171
+A+ +SFNG L + + + + D G+ + +
Sbjct: 124 DRVAKTTSFNGTKLLDGSFNAQAFQVGANAGETITVDAIADAKASALGQFEGINLTNQAI 183
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ I + + + + + + + + K + +
Sbjct: 184 GTASDTAAPATIKIGSDASISLGTIANDAKAIANAITAAGIQGMSATANETKTTSVTATA 243
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
AA G A +KS A G S +
Sbjct: 244 GTAATTKDLVLNGTTITLTATGNASTNRANAMDAINAKSAVTGVRAVDDGNGLSLVAADG 303
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI------DSGYSMVTLN 345
+ + G + V + + + S N
Sbjct: 304 RNITTAAAGAGTATLDNFGLNAAGATVGSTVNITYAAPAGKTGNVVFGGVMNSLSSAIGN 363
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
N + + +S ID + +A +G+ +R + + + +
Sbjct: 364 QGTAVNAINISSVDGANQALSAIDAALTTINSARADLGAFQNRFESVVSNLSVNSENLSA 423
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
GR+ DAD ASE+ LS Q QQ ++ N +LSL R
Sbjct: 424 AKGRITDADFASETANLSRSQILQQAGTAMVAQANQLPQGVLSLLR 469
>gi|1706833|sp|Q06968|FLIC_SALBE RecName: Full=Flagellin; AltName: Full=Phase 1-I flagellin
gi|476258|gb|AAA17868.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Berta]
gi|38050251|gb|AAR10744.1| phase 1 flagellin [Salmonella enterica]
gi|38050253|gb|AAR10745.1| phase 1 flagellin [Salmonella enterica]
gi|308054693|gb|ADO01393.1| flagellin [Salmonella enterica subsp. enterica]
Length = 508
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 83/505 (16%), Positives = 146/505 (28%), Gaps = 56/505 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ Y +D + + + T + N +
Sbjct: 184 GDLKSSFKNVTGYDTYAVGANKYRVDVNSGAVVTDTTAPTVPDKVYVNAANGQLTTDDAE 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
+ +V T ST A +K T + S T
Sbjct: 244 NNTAVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGNDGNGKVSTT 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN------------ 313
+ ++ + N D ++KN TS + K N
Sbjct: 304 INGEKVTLTVADITAGAANVDAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANN 363
Query: 314 -------THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ K ++ N DA K + ++
Sbjct: 364 AVKGESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLA 423
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
ID+ + A +G+I +R + + R+ DAD A+E + +S Q
Sbjct: 424 SIDSALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQ 483
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 ILQQAGTSVLAQANQVPQNVLSLLR 508
>gi|308054817|gb|ADO01455.1| flagellin [Salmonella bongori]
Length = 495
Score = 218 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 73/492 (14%), Positives = 139/492 (28%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLSVQDAYTPKG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDID-------------------------------- 207
+ + + + D
Sbjct: 184 TAVTRDVTTYKNGGTTLAAPNAAAIDTALGTTGAAGTAAVKFKDGNYFVEVTGTTKDGLY 243
Query: 208 --------VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
A+ T + A A + A
Sbjct: 244 EATVDAAGAVTMTANKATVTGASTVTENQIVDAVTPTPVDTVAAATALTNAGVTGATGNT 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + K+ V + +++GN K + T
Sbjct: 304 SLVKMSFEDKNGKVTDAGYALKVGNDYYAADYDEKTGEIKAKTVNYTDATGATKTGAVKF 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S V + + + E ++ ID + A
Sbjct: 364 GGANGKTEVVTTVDGNTYQASDVKGHNFQSGGALSEAVTTKTENPLAKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|221069305|ref|ZP_03545410.1| flagellin domain protein [Comamonas testosteroni KF-1]
gi|220714328|gb|EED69696.1| flagellin domain protein [Comamonas testosteroni KF-1]
Length = 520
Score = 218 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 73/516 (14%), Positives = 142/516 (27%), Gaps = 67/516 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++A + L L R+SSGLR++ A D+AA +I++ M + L+
Sbjct: 5 INTNIQSLNAQRNLSSSQSQLATSMQRLSSGLRINSAKDDAAGLAISERMTTQVRGLTVA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S A+ + + I+ D ++ E+ QL++++
Sbjct: 65 MRNANDGISLAQTAEGALGTLGSNLQRIRELAVQARNATNSAEDRAALDQEVQQLKAEVT 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRD------------------------ 156
IA+ +SFNG N L + + + + +
Sbjct: 125 RIAQQTSFNGTNLLDGSFTNMAFQVGANQGQTIDVNAIVNANLNKLGEWESVDIPAQVKG 184
Query: 157 ----------------------------DNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
+ + TV + E
Sbjct: 185 GSAKPAVLGSPIASVTQFELLNPTGSGSNWNLAAFSLTINGTSAGTVGPVNGAATPEDAR 244
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
V+ + S + + A A A
Sbjct: 245 QQMAAAMQTALDGVITPAGTTKVWVGSDGSLQIDNFSQNPVVLSNGAAAKTLPPGREANG 304
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
P + + + +
Sbjct: 305 TEFASLDPGFKLNGVEIKLPSAANERDRMADLMTAINGATYPTGHAPVTARMDQGRLVLS 364
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
A G+ + + DS L S + T + + + +S +
Sbjct: 365 AASGDISIVTGSANGLADSSDVLAATGLSAGNTSTPPLIDGSRAYKAGGQEEGFASLSVL 424
Query: 369 DTQ------------IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
D +K A +G++ SR + + + + + R++DAD A
Sbjct: 425 DEATADNAILAMDAALKAVNGARATLGAVQSRFETTVENLSVNSENLSASRSRIMDADFA 484
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+E+ LS Q QQ ++ N ++L L +G
Sbjct: 485 AETANLSRTQILQQAGTAMVAQANQLPQQVLKLLQG 520
>gi|38050225|gb|AAR10731.1| phase 1 flagellin [Salmonella enterica]
Length = 500
Score = 218 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 69/497 (13%), Positives = 137/497 (27%), Gaps = 48/497 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVDS 183
Query: 180 STDGT----ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
+ L + ++K + + T
Sbjct: 184 KAVTVAANLDITDLNKDAALKAGTGATTGTAAIKDDKVYYDSASKNYYVEVTGLTTPDDG 243
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
F + V + A A + + + + +++
Sbjct: 244 KNGFYKVNVADDGKVSMAAGTAMEAGKPAGAVEVTKTQEEKNPLPLSADLKTSLKSGGVT 303
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
N + + + G + A+ +
Sbjct: 304 DPEIAAAQVVKMSYTDKNGKTIDGGYAVKVGDDYYAATQKKDGSFSINTTSYTAADGTSK 363
Query: 356 N-----------------------------------------EKLAMEEMVSFIDTQIKC 374
E + ID +
Sbjct: 364 TALNQLGGADGKTEVVSIGGKTYNASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQ 423
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 VDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTS 483
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 VLAQANQVPQNVLSLLR 500
>gi|168233721|ref|ZP_02658779.1| flagellin [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|168823192|ref|ZP_02835192.1| flagellin [Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
gi|194471149|ref|ZP_03077133.1| flagellin [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|38049892|gb|AAR10565.1| phase 2 flagellin [Salmonella enterica]
gi|38049894|gb|AAR10566.1| phase 2 flagellin [Salmonella enterica]
gi|148644991|gb|ABR01027.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Kentucky]
gi|194457513|gb|EDX46352.1| flagellin [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|205332220|gb|EDZ18984.1| flagellin [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205340531|gb|EDZ27295.1| flagellin [Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
gi|320087173|emb|CBY96940.1| Phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 500
Score = 218 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 71/497 (14%), Positives = 137/497 (27%), Gaps = 48/497 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVDS 183
Query: 180 STDGT----ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
+ L + ++K + + T
Sbjct: 184 KAVTVAANLDITDLNKDAALKAGTGATTGTAAIKDGKVYYDSASKNYYVEVTGLTTPDDG 243
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
F + V + A A + + + + +++
Sbjct: 244 KNGFYKVNVADDGKVSMTAGTAMEAGKPAGAVEVTKTQEEKNPLPLSTDLKTSLKSGGIT 303
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
N + + + G V A+
Sbjct: 304 DPEIAAAQVVKMSYTDKNGKTIDGGYAVKVGDNYYAATQKKDGSFSVNTTSYTAADGTTK 363
Query: 356 N-----------------------------------------EKLAMEEMVSFIDTQIKC 374
E + ID +
Sbjct: 364 TALNQLGGADGKTEVVSIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQ 423
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 VDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTS 483
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 VLAQANQVPQNVLSLLR 500
>gi|194365672|ref|YP_002028282.1| flagellin [Stenotrophomonas maltophilia R551-3]
gi|194348476|gb|ACF51599.1| flagellin domain protein [Stenotrophomonas maltophilia R551-3]
Length = 405
Score = 218 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 66/452 (14%), Positives = 134/452 (29%), Gaps = 54/452 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L +L R+SSGLR++ A D+AA +I++ + L
Sbjct: 4 VINTNTMSLNAQRNLSTSGSSLATTIQRLSSGLRINSAKDDAAGLAISERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S +A+ +S+ + + I+ +D K++Q+E+TQL S++
Sbjct: 64 AIRNANDGISLAQVAEGSLSEVGNNLQRIRELAVQSSNATNSSSDRKALQAEVTQLVSEV 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A+ + FNG L S + + + + + ++ +
Sbjct: 124 DRVAKQADFNGTKLLDGSFTSQLFQVGANAGQAIAINSVVNAKADSLGAASFANGYTGTA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+I V P ++V D + + +
Sbjct: 184 LATDKATADTTYSGLQISVTPPGGTATTITVNDFTVKAGESITSATSAAINNKLGETGVM 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ S + + A A S
Sbjct: 244 ASVNAGVISLASVKDGQTFTLGVSAATPPTGATAATIAGLGLTETST------------- 290
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+T
Sbjct: 291 --------------------------------------NGGTLTGTSASFVKDLNVTTAE 312
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ +S +D ++ + +G+I +R ++ + + R+ D D A E+
Sbjct: 313 GAQKALSIVDKALESVNSVRADLGAIQNRFTSVVANLQTSSENLSASRSRIRDTDFAKET 372
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ L+ N +LSL +
Sbjct: 373 AELTRTQILQQAGTAMLAQANQVPQNVLSLLQ 404
>gi|118403359|emb|CAI29256.1| flagellin [Escherichia coli]
Length = 492
Score = 218 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 74/489 (15%), Positives = 144/489 (29%), Gaps = 40/489 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ ++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTA---------------------------------SIA 146
++ + FNG L + +
Sbjct: 124 DRVSEQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATG 183
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+I F + Y ++ ++ + + D + + +V
Sbjct: 184 SDLISKFKATGTDNYDVGGDAYTVNVDSGAVKDKDNKDVFVSAADGSLTTSSDTKVDGKS 243
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ A I+ K G + T A G + + S +
Sbjct: 244 IDATELAKLAINLADQKSIDYKGITFTNKSGTAFDANGKGVLTANIDGQDVKFTINSKAA 303
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
++ + + T N+ T + + D
Sbjct: 304 TGADATITTDIDVYKNSAGQFTTTKVENKAATLSDLDLNAAKKTGSTLVVNGATYNVSAD 363
Query: 327 SRKDLPKEI----DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKI 382
+ S N DA + + ID + +
Sbjct: 364 GKTVTDTTPGAPKVMYLSKSEGGSPILVNEDAAKSLQSTTNPLETIDKALAKVDNLRSDL 423
Query: 383 GSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNS 442
G++ +R + + + R+ DAD A+E + +S Q QQ L+ N +
Sbjct: 424 GAVQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQT 483
Query: 443 TARILSLFR 451
T +LSL R
Sbjct: 484 TQNVLSLLR 492
>gi|38050059|gb|AAR10648.1| phase 1 flagellin [Salmonella enterica]
gi|308054777|gb|ADO01435.1| flagellin [Salmonella enterica subsp. diarizonae]
Length = 495
Score = 218 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 69/492 (14%), Positives = 135/492 (27%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDALNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA----- 234
+ + D ++ D + + + +
Sbjct: 184 KPAQSIKLDTSALTATAIKNGVTGASTDGALKDGKVYSNGTDYYVEVSFADATDTAKGGF 243
Query: 235 -----------------------------------ANATFDQAKGIATIPVPLPAAPAAP 259
+ A
Sbjct: 244 LKVDVDSATGAVTVPGTAATAAATKPAGVKEVTEVQGKIPASTAIQDQLKAGGVTTADAA 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + + AT K + T+ T +
Sbjct: 304 TAEVVKMSYTDKNGKTIDGGYAVKVGNDYYAATQKKDGSFSVNTTSYTADDGTSKTALNK 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E + ID +
Sbjct: 364 LGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAATTTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|38050095|gb|AAR10666.1| phase 1 flagellin [Salmonella enterica]
Length = 501
Score = 218 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 81/498 (16%), Positives = 140/498 (28%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI-----------------RDDNGKVQ 162
++ + FNG L D + A I +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINFQTLGLDTLNVQKKYDVKS 183
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
+ T G + +V D + Y T
Sbjct: 184 EAVKSGGGATLSTTGLDDTALKAGVGGATSGTAAIKDGKVFFDATDNKYFIEIEGLTAGD 243
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
A + T A + +PA A T + S +V T +
Sbjct: 244 ATKNGVYEVNVADDGTVTMPATAAKVTGGIPATATAVTETQPKPVALSTAVKDQLTDSGI 303
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
+D S T G T V S E
Sbjct: 304 SAADAAKGQLVTMSYTDKNGKTIDGGFGVKVGANIYAATKNKDGSFSINTTEYTDKGGNT 363
Query: 343 TLNITRHANTDAYN-----------------------------EKLAMEEMVSFIDTQIK 373
+ + D E ++ ID +
Sbjct: 364 KTALNQLGGADGKTEVVSIDGKTYNASKAAGHNFKAQPELAEAAAATTENPLAKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|189490722|gb|ACE00522.1| H1a [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|194267547|gb|ACF35754.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267549|gb|ACF35755.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267551|gb|ACF35756.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267553|gb|ACF35757.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267555|gb|ACF35758.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267557|gb|ACF35759.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267559|gb|ACF35760.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267561|gb|ACF35761.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267563|gb|ACF35762.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267565|gb|ACF35763.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267567|gb|ACF35764.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267569|gb|ACF35765.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267571|gb|ACF35766.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267573|gb|ACF35767.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267575|gb|ACF35768.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267577|gb|ACF35769.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267579|gb|ACF35770.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267581|gb|ACF35771.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267583|gb|ACF35772.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267585|gb|ACF35773.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267587|gb|ACF35774.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267589|gb|ACF35775.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267591|gb|ACF35776.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267593|gb|ACF35777.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267595|gb|ACF35778.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267597|gb|ACF35779.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267599|gb|ACF35780.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
gi|194267601|gb|ACF35781.1| H1a [Salmonella enterica subsp. enterica serovar Paratyphi A]
Length = 499
Score = 218 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 73/492 (14%), Positives = 138/492 (28%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 8 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 67
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 68 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 127
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI---------------- 163
++ + FNG L D + A I Q
Sbjct: 128 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 187
Query: 164 ------------------------TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+T D + + +ST + + +
Sbjct: 188 EAVTPSATLSTTALDGAGLKTGTGSTTDTGSIKDGKVYYNSTSKNYYVEVEFTDATDQTN 247
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++V+ A + + T +G A + A
Sbjct: 248 KGGFYKVNVADDGAVTMTAATTKEATTPTGITEVTQVQKPVAAPAAIQAQLTAAHVTGAD 307
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + AT + T T
Sbjct: 308 TAEMVKMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTEYTDKDGNTKTALNQ 367
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E ++ ID + A
Sbjct: 368 LGGADGKTEVVSIDGKTYNASKAAGHNFKAQPELAEAAAATTENPLAKIDAALAQVDALR 427
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 428 SDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 487
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 488 NQVPQNVLSLLR 499
>gi|38050223|gb|AAR10730.1| phase 1 flagellin [Salmonella enterica]
Length = 495
Score = 218 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 72/492 (14%), Positives = 140/492 (28%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVQA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + ++ D + + + + + F
Sbjct: 184 TVENSVKLDTSALTADAIKGGVTGATTAGALKDGKVYSNGTDYYVEVSFADATDSGKNGF 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ T A AA + +G + D A + +
Sbjct: 244 LKVDVNTTTGAVTVPAAAANTVAAKPAGVAEVTEVQGLNTPSSAVQDQLTAAGVSAADAA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY---- 355
+ D K D S+ T
Sbjct: 304 KSEVVKMSYTDKNGKTIDGGFGVKVGDDIYAATKNKDGSISINATEYTDKDGNTKTALNQ 363
Query: 356 ------------------------------------NEKLAMEEMVSFIDTQIKCATAAA 379
E + ID + A
Sbjct: 364 LGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAATATTENPLQKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|161613476|ref|YP_001587441.1| flagellin [Salmonella enterica subsp. enterica serovar Paratyphi B
str. SPB7]
gi|38049903|gb|AAR10570.1| phase 1 flagellin [Salmonella enterica]
gi|38049905|gb|AAR10571.1| phase 1 flagellin [Salmonella enterica]
gi|38049909|gb|AAR10573.1| phase 1 flagellin [Salmonella enterica]
gi|49854241|gb|AAT68768.1| flagellar antigen H1:b [Salmonella enterica]
gi|50830880|gb|AAT81605.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Paratyphi B]
gi|161362840|gb|ABX66608.1| hypothetical protein SPAB_01193 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|308054791|gb|ADO01442.1| flagellin [Salmonella enterica subsp. houtenae]
Length = 495
Score = 218 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 72/492 (14%), Positives = 139/492 (28%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLSVQDAYTPKG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDID-------------------------------- 207
+ + + + D
Sbjct: 184 TAVTRDVTTYKNGGTTLTAPNAAAIDTALGTTGAAGTAAVKFKDGNYFVEVTGTTKDGLY 243
Query: 208 --------VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
A+ T + A A + A
Sbjct: 244 EATVDAAGAVTMTANKATVTGASTVTENQIVDAVTPTPVDTVAAATALTNAGVTGATGNT 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + K+ V + +++GN K + T
Sbjct: 304 SLVKMSFEDKNGKVTDAGYALKVGNDYYAADYDEKTGEIKAKTVNYTDATGATKTGAVKF 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S V + + + E ++ ID + A
Sbjct: 364 GGANGKTEVVTTVDGNTYQASDVKGHNFQSGGALSEAVTTKTENPLAKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|555636|gb|AAA53490.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Adelaide]
Length = 504
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 72/502 (14%), Positives = 142/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 122
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A++
Sbjct: 123 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 182
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + + + N ++ +
Sbjct: 183 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPNKVYVNAANGQLTTDDAENNT 242
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
T T + K + K + + +TT
Sbjct: 243 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGNDGNGKVSTTING 302
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL 325
+A + + + S+ + + ++ +
Sbjct: 303 EKVTLTVADITAGAANVDAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 362
Query: 326 DSRKDLPKEIDSGYSMVTLNITRHANTDAYN----------------EKLAMEEMVSFID 369
K + + +T T + K + ++ ID
Sbjct: 363 GESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 422
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 423 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 482
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 483 QAGTSVLAQANQVPQNVLSLLR 504
>gi|38050209|gb|AAR10723.1| phase 1 flagellin [Salmonella enterica]
Length = 496
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 67/493 (13%), Positives = 131/493 (26%), Gaps = 44/493 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ ++
Sbjct: 184 KAVTATLDLDVTDLDTNALKTATGISAGNPAVKDDKVYYDSANNNYYVEVEGFTDNTKDG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A T + + + A ++ +
Sbjct: 244 FYKVQVGDDGKVSMATTTNKETATPPGIVEVSKTHDEKALKASAEVKAALMAGNIDTADA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN--- 356
D N + + + G V + + +
Sbjct: 304 DAAEMVKMSYTDKNGKTIDGGYAVKVGDNYYAATQKKDGSFSVNTTSYTDKDGNTKSALN 363
Query: 357 --------------------------------------EKLAMEEMVSFIDTQIKCATAA 378
E + ID + A
Sbjct: 364 QLGGVDGKTEVVTIDGKTYNASKAEGHNFKAQPELAEAATATTENPLQKIDAALAQVDAL 423
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 RSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQ 483
Query: 439 VNNSTARILSLFR 451
N +LSL R
Sbjct: 484 ANQVPQNVLSLLR 496
>gi|38050117|gb|AAR10677.1| phase 1 flagellin [Salmonella enterica]
Length = 506
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 69/503 (13%), Positives = 130/503 (25%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------------------------- 153
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVDN 183
Query: 154 -------------------------IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
G + + +
Sbjct: 184 TVVTNPNYVDGAALSTTMPTAAEIKTAIGTGAGTPAVKGNEVQFDKSTGKYYVEIEGYSA 243
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
+ I + + K D + A
Sbjct: 244 PDAAKNGIYEAKVADDGTISLETGTKKIGTAMPAGAEVITHVQKKDQPVVVDASVKDALK 303
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
+ A A S + Y + + + T+ T
Sbjct: 304 AGGVDDAVADTAQLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
A + S + + A E ++ I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAEGHNFKAQPDLAEAAAKTTENPLAKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|555638|gb|AAA53491.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
California]
Length = 507
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 82/505 (16%), Positives = 147/505 (29%), Gaps = 56/505 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 122
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 123 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 182
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ Y +D + + + T + N
Sbjct: 183 GDLKSSFKNVTGYDTYAVGANKYRVDVNSGAVVTDTTAPTVPDKVYVNAANGQLTTADAQ 242
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
+ +V T ST A +K + + A T S T
Sbjct: 243 NNTAVDLFKSTKSTAGTDEAKAIATSIKGGKVGDTFDYKGVSFTIDTKAGDDGNGTVSTT 302
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN------------ 313
+ ++ S + + ++K+ TS + K N
Sbjct: 303 INGEKVTLTISDIGASATDVNSAKIQSSKDVYTSVVSGQFTFADKTKNESAKLSDLEANN 362
Query: 314 -------THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ K ++ N DA K + ++
Sbjct: 363 AVKGESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLA 422
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
ID+ + A +G+I +R + + R+ DAD A+E + +S Q
Sbjct: 423 SIDSALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQ 482
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 483 ILQQAGTSVLAQANQVPQNVLSLLR 507
>gi|1706839|sp|Q06973|FLIC_SALMO RecName: Full=Flagellin; AltName: Full=Phase 1-C flagellin
gi|38049969|gb|AAR10603.1| phase 1 flagellin [Salmonella enterica]
gi|38049975|gb|AAR10606.1| phase 1 flagellin [Salmonella enterica]
gi|38049977|gb|AAR10607.1| phase 1 flagellin [Salmonella enterica]
gi|50830900|gb|AAT81615.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Montevideo]
gi|50830968|gb|AAT81649.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Enteritidis]
gi|322616951|gb|EFY13859.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 315996572]
gi|322618191|gb|EFY15083.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-1]
gi|322625861|gb|EFY22680.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-3]
gi|322626313|gb|EFY23123.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-4]
gi|322632728|gb|EFY29473.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-1]
gi|322639070|gb|EFY35763.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-2]
gi|322647253|gb|EFY43752.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. NC_MB110209-0054]
gi|322649899|gb|EFY46320.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. OH_2009072675]
gi|322655507|gb|EFY51815.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. CASC_09SCPH15965]
gi|322660285|gb|EFY56523.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 19N]
gi|322662966|gb|EFY59173.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 81038-01]
gi|322668151|gb|EFY64310.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. MD_MDA09249507]
gi|322675558|gb|EFY71632.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 366867]
gi|323195387|gb|EFZ80567.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 609458-1]
gi|323204443|gb|EFZ89449.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 609460]
gi|323207533|gb|EFZ92481.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|323211858|gb|EFZ96689.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 556152]
gi|323217518|gb|EGA02237.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. MB101509-0077]
gi|323219593|gb|EGA04077.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. MB102109-0047]
gi|323223563|gb|EGA07880.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. MB110209-0055]
gi|323231540|gb|EGA15653.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. MB111609-0052]
gi|323235983|gb|EGA20062.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 2009083312]
gi|323240553|gb|EGA24596.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 2009085258]
gi|323245445|gb|EGA29445.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 315731156]
gi|323250215|gb|EGA34107.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2009159199]
gi|323253974|gb|EGA37798.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|323255499|gb|EGA39260.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008283]
gi|323262096|gb|EGA45659.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008284]
gi|323266219|gb|EGA49709.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
gi|323270672|gb|EGA54113.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008287]
Length = 505
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 74/502 (14%), Positives = 141/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGANKYRVDINSGAVVTDDAAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T + K + K + + +TT
Sbjct: 244 AVNLFKTTKSAAGTDEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGDDGNGKVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 304 EKVTLTVADIATGATDVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|38050071|gb|AAR10654.1| phase 1 flagellin [Salmonella enterica]
gi|38050217|gb|AAR10727.1| phase 1 flagellin [Salmonella enterica]
gi|50830928|gb|AAT81629.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Thompson]
Length = 495
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 72/492 (14%), Positives = 139/492 (28%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVQA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + ++ D + + + + + F
Sbjct: 184 TVENSVKLDTSALTADAIKGGVTGATTAGALKDGKVYSNGTDYYVEVSFADATDSGKNGF 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ T A AA + +G + D A + +
Sbjct: 244 LKVDVNTTTGAVTVPAAAANTVAAKPAGVSEVTEVQGLNTPSSAVQDQLTAAGVSAADAA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY---- 355
+ D K D S+ T
Sbjct: 304 KSEVVKMSYTDKNGKTIDGGFGVKVGDDIYAATKNKDGSISINATEYTDKDGNTKTALNQ 363
Query: 356 ------------------------------------NEKLAMEEMVSFIDTQIKCATAAA 379
E + ID + A
Sbjct: 364 LGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAATTTENPLQKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|38050123|gb|AAR10680.1| phase 1 flagellin [Salmonella enterica]
gi|50830962|gb|AAT81646.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Indiana]
Length = 499
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 76/496 (15%), Positives = 134/496 (27%), Gaps = 47/496 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ V S G + A T
Sbjct: 184 KAVTGVSTLDTTGLTGANIKTGVDGATTTSGSIKDGKVYYDGATKNYYVEVDFSDAADTA 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A T + V + + S A T + +
Sbjct: 244 KNGYYKVNVADDGTVTMGASTTKEPAKPAGVVEVTKTQEEKAIKASAEVKAALTAGGVDA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE-- 357
T V + D T N
Sbjct: 304 ADAATAEMVKMSYTDKNGKTIDGGYAVKVGDSYYAATQKKDGSFSVNTTSYTDKDGNTKS 363
Query: 358 ------------------------------------------KLAMEEMVSFIDTQIKCA 375
E + ID +
Sbjct: 364 ALNQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQV 423
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 DALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSV 483
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 LAQANQVPQNVLSLLR 499
>gi|154016|gb|AAA27092.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Enteritidis]
gi|476260|gb|AAA17869.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Othmarschen]
Length = 505
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 142/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 244 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGDDGNGKVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 304 EKVTLTVADIATSATDVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|38049911|gb|AAR10574.1| phase 1 flagellin [Salmonella enterica]
Length = 495
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 72/492 (14%), Positives = 139/492 (28%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLSVQDAYTPKG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDID-------------------------------- 207
+ + + + D
Sbjct: 184 TAVTRDVTTYKNGGTTLTAPNAAAIDTALGTTGAAGTAAVKFKDGNYFVEVTGTAKDGLY 243
Query: 208 --------VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
A+ T + A A + A
Sbjct: 244 EATVDTAGAVTMTANKATVTGASTVTENQIVDAVTPTPVDTVAAATALTNAGVTGATGNT 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + K+ V + +++GN K + T
Sbjct: 304 SLVKMSFEDKNGKVTDAGYALKVGNDYYAADYDEKTGEIKAKTVNYTDATGAAKTGAVKF 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S V + + + E ++ ID + A
Sbjct: 364 GGANGKTEVVTTVDGNTYQASDVKGHNFQSGGALSEAVTTKTENPLAKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|308054681|gb|ADO01387.1| flagellin [Salmonella enterica subsp. enterica]
Length = 495
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 72/492 (14%), Positives = 138/492 (28%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI---------------- 163
++ + FNG L D + A I Q
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 164 ------------------------TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+T + + + +ST + + +
Sbjct: 184 EAVTPSATLSTTALDGAGLKTGTGSTTNTGSIKDGKVYYNSTSKDYYVEVEFTDATDQAS 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++V+ A + + T +G A + A
Sbjct: 244 KGGFYKVNVADDGAVTMTTATTKEATTPTGITEVTQVQKPVAAPAAIQAQLTAAHVTGAD 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + AT + T T
Sbjct: 304 TAEMVKMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTEYTDKDGNTKTALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E ++ ID + A
Sbjct: 364 LGGADGKTEVVSIDGKTYNASKAAGHNFKAQPELAEAAAATTENPLAKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|50830878|gb|AAT81604.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Miami]
gi|308054679|gb|ADO01386.1| flagellin [Salmonella enterica subsp. enterica]
gi|308054689|gb|ADO01391.1| flagellin [Salmonella enterica subsp. enterica]
Length = 495
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 72/492 (14%), Positives = 138/492 (28%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI---------------- 163
++ + FNG L D + A I Q
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 164 ------------------------TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+T + + + +ST + + +
Sbjct: 184 EAVTPSATLSTTALDGAGLKTGTGSTTNTGSIKDGKVYYNSTSKDYYVEVEFTDATDQAS 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++V+ A + + T +G A + A
Sbjct: 244 KGGFYKVNVADDGAVTMTAATTKEATTPTGITEVTQVQKPVAAPAAIQAQLTAAHVTGAD 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + AT + T T
Sbjct: 304 TAEMVKMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTEYTDKDGNTKTALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E ++ ID + A
Sbjct: 364 LGGADGKTEVVSIDGKTYNASKAAGHNFKAQPELAEAAAATTENPLAKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|38050119|gb|AAR10678.1| phase 1 flagellin [Salmonella enterica]
Length = 506
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 76/503 (15%), Positives = 141/503 (28%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +D+
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVDN 183
Query: 180 STDGTERYGLLDRNHKIKVE--------PQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ Y V + ST K+ + +
Sbjct: 184 TAVTNPNYVDGAALSTTMPTAAEIKTAIGTGAGTPAVKGNEVQFDKSTGKYYVEIEGYSA 243
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
AA +AK + L T V + + S
Sbjct: 244 PDAAKNGIYEAKVADDGTISLETGTKKIGTAMPAGAEVITHVQKKDQPVVVDASVKDALK 303
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
++ ++ K + D + T +
Sbjct: 304 AGGVDDAVADTAQLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 352 TDAYN-------------------------------------------EKLAMEEMVSFI 368
D E ++ I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAEGHNFKAQPELAEAAAKTTENPLAKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|264676587|ref|YP_003276493.1| flagellin-like protein [Comamonas testosteroni CNB-2]
gi|262207099|gb|ACY31197.1| flagellin-like protein [Comamonas testosteroni CNB-2]
Length = 409
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 68/452 (15%), Positives = 136/452 (30%), Gaps = 50/452 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++A + L L R+SSGLR++ A D+AA +IA+ M + L+
Sbjct: 5 INTNIQSLNAQRSLSSSQSQLATSMQRLSSGLRINSAKDDAAGLAIAERMTTQVRGLTVA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
G S A+ +S + I+ D ++ +E+ QL++++
Sbjct: 65 MRNANDGISLAQTAEGALSSVGSNLQRIRELAVQSRNATNSDEDRAALDAEVQQLKAEIS 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IAR +SFNG L + + + + + +I + + T +
Sbjct: 125 RIARDTSFNGTKLLDGSFTNMAFQVGANQGQTIDVNSIADSRIDKLGTWNSVPTPSKSVA 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
E V S + W A +
Sbjct: 185 VGTIAGGAATGDTGDYTYELTVDSVAFFSKTVLDTKTADPLVTGQELDAQWAAFAATSAG 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
Q ++ A + + T
Sbjct: 245 QGYKLSGTFSAGTAVISKLDGTD------------------------------------- 267
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + + + + + +
Sbjct: 268 ----------LKIEVKETGATTAKTAPTYGSAGFVGTFSNGKVTQSKTGFEDLSVKDTQN 317
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + +D ++ A +G+I SR + + + + + R++DAD A+E+
Sbjct: 318 SDNAIVAMDAALRAINGARADLGAIQSRFETTVENLSVNTENLSASRSRIMDADFAAETA 377
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
LS Q QQ ++ N ++L L +G
Sbjct: 378 NLSRTQILQQAGTAMVAQANQLPQQVLKLLQG 409
>gi|315127345|ref|YP_004069348.1| flagellin domain-containing protein [Pseudoalteromonas sp. SM9913]
gi|315015859|gb|ADT69197.1| flagellin domain-containing protein [Pseudoalteromonas sp. SM9913]
Length = 482
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 72/480 (15%), Positives = 150/480 (31%), Gaps = 29/480 (6%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN ++++ + L + LE R+SSGLR++ A D+AA IA + S L+
Sbjct: 3 LSVNTNVASLNGQRNLSKSSMALETSMQRLSSGLRINSAKDDAAGLQIANRLTSQVNGLT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S A+ M ++ +++ +++ D S+Q E++ LQ +
Sbjct: 63 VAQRNANDGISMAQTAEGAMQESANILQRMRDLSLQSANGSNSAVDRASLQKEVSALQQE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA + F G + L G+ + + + + + + +D
Sbjct: 123 LTRIADTTKFGGTSLLDGTFGTKQFQVGANANETINVSLRNVAADSIGAHEIKGPGNAVD 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS-------------------- 218
++T + + + V + V +
Sbjct: 183 ANTRLGDVQTVNLATNHGTSADTVNINGTDIVIAGGSGAAVIADTINKSGAGVVAEAKID 242
Query: 219 ------TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
T + G + A + + +
Sbjct: 243 TSFAGITSSSTGVIEIKKNGAVEKSFDLGTYGGDMERLTSDMQQAGYDAIYDPATKEIAF 302
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
A I + +D+ ++T+ + + ++ + TT +
Sbjct: 303 KATDVDGIDITGTDVSGFTIGGTAVTTVANSFSVSAELNLSSANKIGISGTTANQLFGTG 362
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + ID + A +G++ +R
Sbjct: 363 TAAIQSTGGASSLTSIESVDISGSTSEGAQNAIKAIDAALAQIDAQRADLGAVQNRFGFT 422
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + + V R+ D D A E+ L+ Q QQ LS N LSL G
Sbjct: 423 IANLANVSENVSASRSRIQDTDYALETATLTKNQIMQQAGTTILSQANQLPQAALSLLGG 482
>gi|153979|gb|AAA27072.1| phase-1 flagellar filament protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
Length = 490
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 69/487 (14%), Positives = 128/487 (26%), Gaps = 38/487 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLG-----------------------------------SSTAS 144
+ + F+G L D +
Sbjct: 124 DRVNGQTQFSGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
A +V G T +
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDEKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
D + T T + + L AA +
Sbjct: 244 GYYEVSVDKTNGEVTLAAVTPATVTTATALSGKMYSANPDSDIAKAALTAAGVTGTASVV 303
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ + + D + AT + T T +
Sbjct: 304 KMSYTDNNGKTIDGGLAVKVGDDYYSATQDKDGSISIDTTKYTADNGTSKTALNKLGGAD 363
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+ S + + A E + ID + +G+
Sbjct: 364 GKTEVVTIDGKTYNASKAAGHDFKAEPELAEQAAKTTENPLQKIDAALAQVDTLRSDLGA 423
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
+ +R + + + + R+ D+D A+E + +S Q QQ L+ N
Sbjct: 424 VQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQ 483
Query: 445 RILSLFR 451
+LSL R
Sbjct: 484 NVLSLLR 490
>gi|154008|gb|AAA27088.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Pullorum]
Length = 505
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 74/502 (14%), Positives = 142/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + +++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQSVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 244 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGDDGNGKVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 304 EKVTLTVADIATGATDVNAATLQSSKNVYTSVVNGKFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDTVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|476248|gb|AAA17863.1| phase 1 flagellin [Salmonella enterica]
Length = 508
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 78/505 (15%), Positives = 143/505 (28%), Gaps = 56/505 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ Y +D + + + + N
Sbjct: 184 GDLKSSFKNVTGYDTYAVGANKYRVDINSGAVVTDATAPTVPDKVYVNAANGQLTTDDAQ 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
+ +V T S A +K + + S T
Sbjct: 244 NNTAVDLFKTTKSAVGTAEAKAIAGAIKGGKEGDTFDYKGVSFTIDTKTGDDGNGKVSTT 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN------------ 313
+ ++ + + + ++KN TS + K N
Sbjct: 304 INGEKVTLTVADITTGATDVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANN 363
Query: 314 -------THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ K ++ N DA K + ++
Sbjct: 364 AVKGESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLA 423
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
ID+ + A +G+I +R + + R+ DAD A+E + +S Q
Sbjct: 424 AIDSALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQ 483
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 ILQQAGTSVLAQANQVPQNVLSLLR 508
>gi|555650|gb|AAA53497.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Monschaui]
Length = 507
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 81/505 (16%), Positives = 146/505 (28%), Gaps = 56/505 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 122
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 123 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 182
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ Y +D + + + T + N
Sbjct: 183 GDLKSSFKNVTGYDTYAVGANKYRVDVNSGAVVTDTTAPTVPDKVYVNAANGQLTTADAQ 242
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
+ +V T S A +K + + A T S T
Sbjct: 243 NNTAVDLFKSTKSAAGTDEAKAIATSIKGGKVGDTFDYKGVSFTIDTKAGDDGNGTVSTT 302
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN------------ 313
+ ++ S + + ++K+ TS + K N
Sbjct: 303 INGEKVTLTISDIGASATDVNSAKIQSSKDVYTSVVSGQFTFADKTKNESAKLSDLEANN 362
Query: 314 -------THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ K ++ N DA K + ++
Sbjct: 363 AVKGESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLA 422
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
ID+ + A +G+I +R + + R+ DAD A+E + +S Q
Sbjct: 423 SIDSALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQ 482
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 483 ILQQAGTSVLAQANQVPQNVLSLLR 507
>gi|38050087|gb|AAR10662.1| phase 1 flagellin [Salmonella enterica]
Length = 500
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 77/497 (15%), Positives = 139/497 (27%), Gaps = 48/497 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + S
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ L + S A ++ A
Sbjct: 184 EAVKSGGGATLSTTGLDDAALKTGVGGATSGTAAIKDGKVFFDATDNKYFIEVEGLTAGD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW----------- 288
G+ + V P TT G + + A + T +
Sbjct: 244 ATKNGVYEVSVADDGTVTMPATTKVAGGMPATATAVTETQPKPVALSTAVKDQLTDSGIS 303
Query: 289 ----------------------------------VRATTKNSITSDPGYTNSTVAKVGNT 314
AT + T T
Sbjct: 304 AADAAKGQLVTMSYTDKNGKTIDGGFGVKVGANIYAATKNKDGSFSINTTEYTDKGGNTK 363
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ S + + A E ++ ID +
Sbjct: 364 TALNQLGGADGKTEVVSIDGKTYNASKAAGHNFKAQPELAEAAAATTENPLAKIDAALAQ 423
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 VDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTS 483
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 VLAQANQVPQNVLSLLR 500
>gi|38050145|gb|AAR10691.1| phase 1 flagellin [Salmonella enterica]
Length = 505
Score = 217 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 72/502 (14%), Positives = 139/502 (27%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ S++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELTVQATNGTNSDSDLTSIQNEITQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG--------SFIRDDNGKVQITTIDYYLD 171
++ + FNG L D A +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLKIQVGANDGETISIDLKKIDSKSLGMDGFNVNGAHKATG 183
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ + +T + + ++ L T +
Sbjct: 184 SDLISQFGATGTDNYNVTKGATTTTYSVDIKSGAVTTGTPAEAVFVNAADGSLTTDATTK 243
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT------------- 278
N D KG+A + + + + + T
Sbjct: 244 NTEINGNDDFTKGLADAAKGAVKDSTFTYSGIEFTAKTAGTADGNGTFEAKIDGTVISFE 303
Query: 279 -----------------------------YIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
++ + + G T +
Sbjct: 304 ITGGTTPSSAVTGAGGAKAYVSKIDGSITTTAEVDNRAAKMSDLDLNNAVKIGSTLNVNG 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
N + D + D+ + N DA + + + + ID
Sbjct: 364 ATYNVNAKGDEVTGKFDNGAGGLVDKQVFLGKTAGGAATLINEDAAKSQQSTVDPLKTID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ A +G++ +R + + + R+ DAD A+E + + Q Q
Sbjct: 424 DALAQVDALRSDLGAVQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMYKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQSVLSLLR 505
>gi|260868515|ref|YP_003234917.1| flagellin [Escherichia coli O111:H- str. 11128]
gi|309795966|ref|ZP_07690379.1| bacterial flagellin [Escherichia coli MS 145-7]
gi|118403361|emb|CAI29257.1| flagellin [Escherichia coli]
gi|124516983|emb|CAI56314.1| flagellin [Escherichia coli]
gi|124516985|emb|CAI56315.1| flagellin [Escherichia coli]
gi|124516987|emb|CAI56316.1| flagellin [Escherichia coli]
gi|257764871|dbj|BAI36366.1| flagellin [Escherichia coli O111:H- str. 11128]
gi|308120416|gb|EFO57678.1| bacterial flagellin [Escherichia coli MS 145-7]
gi|323180826|gb|EFZ66366.1| flagellin [Escherichia coli 1180]
Length = 492
Score = 217 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 74/489 (15%), Positives = 141/489 (28%), Gaps = 40/489 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + I+ SIQ+EITQ ++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRIRELSVQATNGTNSDSDLSSIQAEITQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTA---------------------------------SIA 146
++ + FNG L + +
Sbjct: 124 DRVSEQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATG 183
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+I F + Y ++ E+ + + + D + + +V +
Sbjct: 184 SDLISKFKATGTDNYDVGGKTYTVNVESGAVKNDANKDVFVSAADGSLTTSSDTKVSGES 243
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ A I G A G + + S
Sbjct: 244 IDATELAKLAIKLADKGSIEYKGITFTNNTGAELDANGKGVLTANIDGQDVQFTIDSNAP 303
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
++ + + T N+ T + + D
Sbjct: 304 TGAGATITTDTAVYKNSAGQFTTTKVENKAATLSDLDLNAAKKTGSTLVVNGATYNVSAD 363
Query: 327 SRKDLPKEI----DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKI 382
+ S N DA + + ID + +
Sbjct: 364 GKTVTDTTPGAPKVMYLSKSEGGSPILVNEDAAKSLQSTTNPLETIDKALAKVDNLRSDL 423
Query: 383 GSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNS 442
G++ +R + + + R+ DAD A+E + +S Q QQ L+ N +
Sbjct: 424 GAVQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQT 483
Query: 443 TARILSLFR 451
T +LSL R
Sbjct: 484 TQNVLSLLR 492
>gi|297007|emb|CAA78779.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Oranienburg]
Length = 507
Score = 217 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 81/505 (16%), Positives = 146/505 (28%), Gaps = 56/505 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 122
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 123 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 182
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ Y +D + + + T + N
Sbjct: 183 GDLKSSFKNVTGYDTYAVGANKYRVDVNSGAVVTDTTAPTVPDKVYVNAANGQLTTADAQ 242
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
+ +V T S A +K + + A T S T
Sbjct: 243 NNTAVDLFKSTKSAAGTDDAKAIATSIKGGKVGDTFDYKGVSFTIDTKAGDDGNGTVSTT 302
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN------------ 313
+ ++ S + + ++K+ TS + K N
Sbjct: 303 INGEKVTLTISDIGASATDVNSAKIQSSKDVYTSVVSGQFTFADKTKNESAKLSDLEANN 362
Query: 314 -------THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ K ++ N DA K + ++
Sbjct: 363 AVKGESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLA 422
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
ID+ + A +G+I +R + + R+ DAD A+E + +S Q
Sbjct: 423 SIDSALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQ 482
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 483 ILQQAGTSVLAQANQVPQNVLSLLR 507
>gi|38050067|gb|AAR10652.1| phase 1 flagellin [Salmonella enterica]
Length = 495
Score = 217 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 69/492 (14%), Positives = 136/492 (27%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTXIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDALNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA----- 234
+ + + D ++ D + + + +
Sbjct: 184 KPAQSIKLDTSALTATAIKDGVTGASTDGALKDGKVYSNGTDYYVEVSFADATDTAKGGF 243
Query: 235 -----------------------------------ANATFDQAKGIATIPVPLPAAPAAP 259
+ A
Sbjct: 244 LKVDVDSATGAVTVPGTAATAAATKPAGVKEVTEVQGKIPASTAIQDQLKAGGVTTADAA 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + + AT K + T+ T +
Sbjct: 304 TAEVVKMSYTDKNGKTIDGGYAVKVGNDYYAATQKKDGSFSVNTTSYTADDGTSKTALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E + ID +
Sbjct: 364 LGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAATTTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|38049842|gb|AAR10540.1| phase 2 flagellin [Salmonella enterica]
gi|38049844|gb|AAR10541.1| phase 2 flagellin [Salmonella enterica]
gi|38049846|gb|AAR10542.1| phase 2 flagellin [Salmonella enterica]
gi|308054857|gb|ADO01475.1| flagellin [Salmonella enterica subsp. diarizonae]
Length = 495
Score = 217 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 71/492 (14%), Positives = 132/492 (26%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVL------------------------------------ 203
+ +
Sbjct: 184 KAAQSVKLDTSALTAAAIKGGVTGATTDGALKDGKVYSNGTDYYVEVSFADATDSAKGGF 243
Query: 204 ----KDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
D GT + + + + A
Sbjct: 244 LKVDVDSTTGKVTVPGTAAAASSTKPVGVNEVTEVQGKIPASTAIQDQLKAGGVSNADAA 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + D + AT K + T+ T
Sbjct: 304 TAEVVKMSYTDKNGKTIDGGYAVKVGDDYYAATQKKDGSFSVNTTSYTDKDGNTKSALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E + ID +
Sbjct: 364 LGGADGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|197362054|ref|YP_002141691.1| flagellin [Salmonella enterica subsp. enterica serovar Paratyphi A
str. AKU_12601]
gi|197093531|emb|CAR58992.1| flagellin [Salmonella enterica subsp. enterica serovar Paratyphi A
str. AKU_12601]
Length = 495
Score = 217 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 71/492 (14%), Positives = 136/492 (27%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------------------------- 153
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 154 --------------IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+T D + + +ST + + +
Sbjct: 184 EAVTPSATLSTTALDGTGLKTGTGSTTDTGSIKDGKVYYNSTSKNYYVEVEFTDATDQTN 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++V+ A + + T +G A + A
Sbjct: 244 KGGFYKVNVADDGAVTMTAATTKEATTPTGITEVTQVQKPVAAPAAIQAQLTAAHVTGAD 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + AT + T T
Sbjct: 304 TAEMVKMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTEYTDKDGNTKTALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E ++ ID + A
Sbjct: 364 LGGADGKTEVVSIDGKTYNASKAAGHNFKAQPELAEAAAATTENPLAKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|260855903|ref|YP_003229794.1| flagellin [Escherichia coli O26:H11 str. 11368]
gi|300822304|ref|ZP_07102445.1| bacterial flagellin [Escherichia coli MS 119-7]
gi|257754552|dbj|BAI26054.1| flagellin [Escherichia coli O26:H11 str. 11368]
gi|300525187|gb|EFK46256.1| bacterial flagellin [Escherichia coli MS 119-7]
gi|309702218|emb|CBJ01535.1| putative flagellin [Escherichia coli ETEC H10407]
gi|323152744|gb|EFZ39016.1| flagellin [Escherichia coli EPECa14]
gi|323937198|gb|EGB33478.1| bacterial flagellin [Escherichia coli E1520]
Length = 487
Score = 217 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 74/485 (15%), Positives = 151/485 (31%), Gaps = 37/485 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ ++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTA---------------------------------SIA 146
++ + FNG L + +
Sbjct: 124 DRVSEQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATG 183
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+I F + Y ++ ++ + +T D + K + +
Sbjct: 184 SDLISKFKATGTDNYDVGGDAYTVNVDSGAVKDTTGNDIFVSAADGSLTTKSDTNIAGTG 243
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ A+ + + T +G A G+ + + + +
Sbjct: 244 IDATALAAAAKNKAQNDKFTFNGVEFTTTTAADGNGNGVYSAEIDGKSVTFTVTDADKKA 303
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + + +A T + + + + V Y V + T+
Sbjct: 304 SLITSETVYKNSAGLYTTTKVDNKAATLSDLDLNAAKKTGSTLVVNGATYDVSADGKTIT 363
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
S N DA + + ID + +G++
Sbjct: 364 E-TASGNNKVMYLSKSEGGSPILVNEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGAVQ 422
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + + + R+ DAD A+E + +S Q QQ L+ N +T +
Sbjct: 423 NRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQTTQNV 482
Query: 447 LSLFR 451
LSL R
Sbjct: 483 LSLLR 487
>gi|38049899|gb|AAR10568.1| phase 1 flagellin [Salmonella enterica]
gi|308054683|gb|ADO01388.1| flagellin [Salmonella enterica subsp. enterica]
gi|308054685|gb|ADO01389.1| flagellin [Salmonella enterica subsp. enterica]
gi|308054785|gb|ADO01439.1| flagellin [Salmonella enterica subsp. houtenae]
gi|308054787|gb|ADO01440.1| flagellin [Salmonella enterica subsp. houtenae]
gi|308054789|gb|ADO01441.1| flagellin [Salmonella enterica subsp. houtenae]
Length = 495
Score = 217 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 73/492 (14%), Positives = 138/492 (28%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI---------------- 163
++ + FNG L D + A I Q
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 164 ------------------------TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+T D + + +ST + + +
Sbjct: 184 EAVTPSATLSTTALDGAGLKTGTGSTTDTGSIKDGKVYYNSTSKNYYVEVEFTDATDQTN 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++V+ A + + T +G A + A
Sbjct: 244 KGGFYKVNVADDGAVTMTAATTKEATTPTGITEVTQVQKPVAAPAAIQAQLTAAHVTGAD 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + AT + T T
Sbjct: 304 TAEMVKMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTEYTDKDGNTKTALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E ++ ID + A
Sbjct: 364 LGGADGKTEVVSIDGKTYNASKAAGHNFKAQPELAEAAAATTENPLAKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|308054735|gb|ADO01414.1| flagellin [Salmonella enterica subsp. salamae]
Length = 495
Score = 217 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 71/492 (14%), Positives = 136/492 (27%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI---------------- 163
++ + FNG L D + A I Q
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 164 ------------------------TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+T + + + +ST + + +
Sbjct: 184 EAVTPSATLSTTTLDGAGLKTGTGSTTNTGSIKDGKVYYNSTSKNYYVEVEFTDATDQTN 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++V+ A + + T +G A + A
Sbjct: 244 KGGFYKVNVADDGAVTMTAATTKETTTPTGITEVTQVQKPVAAPAAIQAQLTAAHVTGAD 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + AT + T T
Sbjct: 304 TAEMVKMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTKYTDKDGNTKSALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E + ID +
Sbjct: 364 LGGADGKTEVVTIDGKTYNASKAAGHDFKAQPELAEVATKTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|308054705|gb|ADO01399.1| flagellin [Salmonella enterica subsp. enterica]
Length = 505
Score = 217 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 72/502 (14%), Positives = 142/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + + + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPNKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
T T + K + K + + +TT
Sbjct: 244 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGNDGNGKVSTTING 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL 325
+A + + + S+ + + ++ +
Sbjct: 304 EKVTLTVADITAGAANVDAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 326 DSRKDLPKEIDSGYSMVTLNITRHANTDAYN----------------EKLAMEEMVSFID 369
K + + +T T + K + ++ ID
Sbjct: 364 GESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|124516981|emb|CAI56313.1| flagellin [Escherichia coli]
Length = 492
Score = 217 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 75/489 (15%), Positives = 144/489 (29%), Gaps = 40/489 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + I+ SIQ+EITQ ++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRIRELSVQATNGTNSDSDLSSIQAEITQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTA---------------------------------SIA 146
++ + FNG L + +
Sbjct: 124 DRVSEQTQFNGVKVLAENNEMKIQVGANDGEAITINLAKIDAKTLGLDGFNIDGAQKATG 183
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+I F + Y ++ ++ + + D + + +V
Sbjct: 184 SDLISKFKATGTDNYDVGGDAYTVNVDSGAVKDKDNKDVFVSAADGSLTTSSDTKVDGKS 243
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ A I+ K G + T A G + + S +
Sbjct: 244 IDATELAKLAINLADQKSIDYKGITFTNKSGTAFDANGKGVLTANIDGQDVKFTINSTAA 303
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
++ + + T N+ T + + D
Sbjct: 304 TGADATITTDIDVYKNSAGQFTTTKVENKAATLSDLDLNAAKKTGSTLVVNGATYNVSAD 363
Query: 327 SRKDLPKEI----DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKI 382
+ S N DA + + ID + +
Sbjct: 364 GKTVTDTTPGAPKVMYLSKSEGGSPILVNEDAAKSLQSTTNPLETIDKALAKVDNLRSDL 423
Query: 383 GSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNS 442
G++ +R + + + R+ DAD A+E + +S Q QQ L+ N +
Sbjct: 424 GAVQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQT 483
Query: 443 TARILSLFR 451
T +LSL R
Sbjct: 484 TQNVLSLLR 492
>gi|54297249|ref|YP_123618.1| flagellin [Legionella pneumophila str. Paris]
gi|53751034|emb|CAH12445.1| flagelline [Legionella pneumophila str. Paris]
Length = 475
Score = 217 bits (551), Expect = 4e-54, Method: Composition-based stats.
Identities = 67/470 (14%), Positives = 149/470 (31%), Gaps = 22/470 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++++A + L ++ R+SSGLR++ A D+AA +I+Q M + ++
Sbjct: 4 VINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
G S +A+ M + +++ ++ + SIQSEI+QL+S+L
Sbjct: 64 AVRNANDGISLAQVAEGAMQETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA+ + FNG+ L ++ + + + + T + +
Sbjct: 124 ERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFSIGSIKASSIGGIATATGTEVAGA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI-------------------STK 220
+ I ++ ++ T+
Sbjct: 184 AATDITIAIGGGAATSINSSANFTGALNGQDATSAYAKAAAINDAGIGGLSVTASTSGTQ 243
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ + L + ++ + +
Sbjct: 244 AVGAIGGTAGDTYNLTINGVAIYTNLNVATALTNSDLRDAINGVSNQTGVVASLNGGNMT 303
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+ T + + + + + +D+ + G S
Sbjct: 304 LTAADGRNITVTESGTGFTAGTDGLTVTGGAFDGALRGTLSISAVDTIAIGGTVANVGLS 363
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T ++ + + + ID + + +G++ +R ++ +
Sbjct: 364 ANIAKDTVGVDSLDVSTAAGAQTAIKRIDAALNSVNSNRANMGALQNRFESTIANLQNVS 423
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D + R+ DAD A+E L+ Q QQ L+ N+ +LSL
Sbjct: 424 DNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLL 473
>gi|476240|gb|AAA17859.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Pensacola]
Length = 508
Score = 217 bits (551), Expect = 4e-54, Method: Composition-based stats.
Identities = 83/505 (16%), Positives = 146/505 (28%), Gaps = 56/505 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ Y +D + + + T + N
Sbjct: 184 GDLKSSFKNVTGYDTYAVGANKYRVDVNSGAVVTDTTAPTVPDKVYVNAANGQLTTADAQ 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
+ +V T S A +K + + A T S T
Sbjct: 244 NNTAVDLFKSTKSAAGTDEAKAIATSIKGGKVGDTFDYKGVSFTIDTKAGDDGNGTVSTT 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN------------ 313
+ ++ S N D ++K+ TS + K N
Sbjct: 304 INGEKVTLTISDIAASAANVDDAKIQSSKDVYTSVVSGQFTFADKTKNESAKLSDLEANN 363
Query: 314 -------THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ K ++ N DA K + ++
Sbjct: 364 AVKGESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLA 423
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
ID+ + A +G+I +R + + R+ DAD A+E + +S Q
Sbjct: 424 SIDSALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQ 483
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 ILQQAGTSVLAQANQVPQNVLSLLR 508
>gi|38049983|gb|AAR10610.1| phase 1 flagellin [Salmonella enterica]
Length = 505
Score = 217 bits (551), Expect = 4e-54, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 142/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 244 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGNDGNGKVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 304 EKVTLTVADIAASATDVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|33590237|gb|AAQ22680.1| flagellin [Escherichia coli]
Length = 488
Score = 217 bits (551), Expect = 4e-54, Method: Composition-based stats.
Identities = 74/486 (15%), Positives = 153/486 (31%), Gaps = 37/486 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G+S + +++ + + ++ SIQ+EITQ ++
Sbjct: 64 ASRNANDGNSVAQTTEGALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTA---------------------------------SIA 146
++ + FNG L + +
Sbjct: 124 DRVSEQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATG 183
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+I F + Y ++ ++ + +T D + K + +
Sbjct: 184 SDLISKFKATGTDNYDVGGDAYTVNVDSGAVKDTTGNDIFVSAADGSLTTKSDTNIAGTG 243
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ A+ + + T +G A G+ + + + +
Sbjct: 244 IDATALAAAAKNKAQNDKFTFNGVEFTTTTAADGNGNGVYSAEIDGKSVTFTVTDADKKA 303
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + + +A T + + + + V Y V + T+
Sbjct: 304 SLITSETVYKNSAGLYTTTKVDNKAATLSDLDLNAAKKTGSTLVVNGATYDVSADGKTIT 363
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
S N DA + + ID + +G++
Sbjct: 364 E-TASGNNKVMYLSKSEGGSPILVNEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGAVQ 422
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + + + R+ DAD A+E + +S Q QQ L+ N +T +
Sbjct: 423 NRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQTTQNV 482
Query: 447 LSLFRG 452
LSL +G
Sbjct: 483 LSLLQG 488
>gi|38050227|gb|AAR10732.1| phase 1 flagellin [Salmonella enterica]
Length = 500
Score = 217 bits (551), Expect = 4e-54, Method: Composition-based stats.
Identities = 72/497 (14%), Positives = 141/497 (28%), Gaps = 48/497 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVDS 183
Query: 180 STDGT----ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
+ L + ++K + + T A
Sbjct: 184 KAVTVAADLDITALNTDAALKAGTGATTGTPSIKDDKVYYDSASKNYYVEVTGLTAPDDA 243
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
F + V + A A + + + + +++
Sbjct: 244 KNGFYKVNVADDGTVSMAANTAIEAGKPAGAVEVTKTQEEKNPLPLSADLKTSLKSGEIT 303
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
N + + + + G V + +
Sbjct: 304 DPDIATAQVVKMSYTDKNGKTIDGGYAVKVGNDYYAATQKKDGSFSVNTTSYTDKDGNTK 363
Query: 356 N-----------------------------------------EKLAMEEMVSFIDTQIKC 374
+ E + ID +
Sbjct: 364 SALNQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAATATTENPLQKIDAALAQ 423
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 VDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTS 483
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 VLAQANQVPQNVLSLLR 500
>gi|154006|gb|AAA27087.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Pullorum]
gi|50830876|gb|AAT81603.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Pullorum]
Length = 505
Score = 217 bits (551), Expect = 4e-54, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 143/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + +++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQSVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 244 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGDDGNGKVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 304 EKVTLTVADIATGATDVNAATLQSSKNVYTSVVNGKFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|325496957|gb|EGC94816.1| flagellin [Escherichia fergusonii ECD227]
Length = 495
Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 75/485 (15%), Positives = 151/485 (31%), Gaps = 37/485 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 12 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 71
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ ++
Sbjct: 72 ASRNANDGISVAQTTEGALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEI 131
Query: 120 RDIARGSSFNGENWLRTDLGSSTA---------------------------------SIA 146
++ + FNG L + +
Sbjct: 132 DRVSEQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATG 191
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+I F + Y ++ ++ + +T D + K + +
Sbjct: 192 SDLISKFKATGTDNYDVNGTAYTVNVDSGAVKDTTGNDIFVSAADGSLTTKSDTNIAGTG 251
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ A+ + K+ T +G A G + + + +
Sbjct: 252 IDATALAAAAKNKKQDDKFTFNGVEFTTTTAADANGNGAYSAEIDGKSVTFTVTNADTKA 311
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + + +A T + + + + V Y V + T+
Sbjct: 312 SLATSETVYKNSAGLYTTTKVDNKAATLSDLDLNAAKKTGSTLVVNGATYDVSADGKTVT 371
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
S N DA + + ID + +G++
Sbjct: 372 E-TASGNNKVMYLSKSEGGSPILVNEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGAVQ 430
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + + + R+ DAD A+E + +S Q QQ L+ N +T +
Sbjct: 431 NRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQTTQNV 490
Query: 447 LSLFR 451
LSL R
Sbjct: 491 LSLLR 495
>gi|308054699|gb|ADO01396.1| flagellin [Salmonella enterica subsp. enterica]
Length = 508
Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 82/505 (16%), Positives = 147/505 (29%), Gaps = 56/505 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ Y +D + + + T + N
Sbjct: 184 GDLKSSFKNVTGYDTYAVGANKYRVDVNSGAVVTDTTAPTVPDKVYVNAANGQLTTADAQ 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
+ +V T ST A +K + + A T S T
Sbjct: 244 NNTAVDLFKSTKSTAGTDEAKAIATSIKGGKVGDTFDYKGVSFTIDTKAGDDGNGTVSTT 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN------------ 313
+ ++ S + + ++K+ TS + K N
Sbjct: 304 INGEKVTLTISDIGASATDVNSAKIQSSKDVYTSVVSGQFTFADKTKNESAILSDLEANN 363
Query: 314 -------THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ K ++ N DA K + ++
Sbjct: 364 AVKGESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLA 423
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
ID+ + A +G+I +R + + R+ DAD A+E + +S Q
Sbjct: 424 SIDSALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQ 483
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 ILQQAGTSVLAQANQVPQNVLSLLR 508
>gi|38049951|gb|AAR10594.1| phase 1 flagellin [Salmonella enterica]
Length = 505
Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 140/502 (27%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGESITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAQNNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T K K + + +TT
Sbjct: 244 AVALFNTTKSTAGTDDAKAIANVIKGGKEGDTFDYKGVSFTIDTKTGNDGNGTVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + T S N+ V
Sbjct: 304 EKVTLTVADITGGAANVNDATLQSSRNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLAAID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|46093552|dbj|BAD14967.1| flagellin [Escherichia coli]
Length = 423
Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 70/452 (15%), Positives = 137/452 (30%), Gaps = 35/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSQNGTNSDSDVQSIQEEIQQRLAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L +D + + + D T ++ +
Sbjct: 124 DRVSGQTQFNGVKVLTSD-SKLSIQVGANDGEKIDIDLKKIDTGTLGLANFSVDSKFDST 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
ST G + + K + A G + K A
Sbjct: 183 STKTVANGGDIVLSSKTIKAEIQIDSHSADPKAADGLYALKDGTGYAVKDKDGAYHAAVK 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + T+ + + +A + + + N
Sbjct: 243 NADGKVTWDSSDTSVTATDVDQTTKVTEFQEVYKKVAANTSGLAANQTFKSYKKDNGELG 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
N S +
Sbjct: 303 YVVENADGTFNRANVDSKTGVVSVG-------------------------------TKIS 331
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++++ ID +K + +G+I +R + + + R+ D+D A+E
Sbjct: 332 TSPDVLATIDNALKIVDSQRSSLGAIQNRFDSAITNLGNTVNNLSSARSRIEDSDYATEV 391
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +T +LSL R
Sbjct: 392 SNMSRAQILQQAGTSVLAQANQTTQNVLSLLR 423
>gi|476234|gb|AAA17856.1| phase 1 flagellin [Salmonella enterica]
gi|38050003|gb|AAR10620.1| phase 1 flagellin [Salmonella enterica]
gi|38050255|gb|AAR10746.1| phase 1 flagellin [Salmonella enterica]
gi|50830896|gb|AAT81613.1| phase 1 flagellin [Salmonella enterica subsp. salamae serovar
42:f,g,t:--]
Length = 505
Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 142/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 244 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVSFTIDTKAGNDGNGTVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 304 EKVTLTVADITAGAADVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLAAID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|38050083|gb|AAR10660.1| phase 1 flagellin [Salmonella enterica]
Length = 500
Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 77/497 (15%), Positives = 141/497 (28%), Gaps = 48/497 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + S
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ L+ + + A ++ A
Sbjct: 184 EAVKSGGGATLNTTGLNDAALKTGVGGATNGTAAIKDGKVFFDATDNKYFIEVEGLTAGD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW----------- 288
G+ + V P TT T G + + A + T +
Sbjct: 244 ATKNGVYEVSVADDGTVTMPATTKVTGGMPATATAVTETQPKPVALSTAVKDQLTDSGIS 303
Query: 289 ----------------------------------VRATTKNSITSDPGYTNSTVAKVGNT 314
AT + T T
Sbjct: 304 AADAAKGQLVTMSYTDKNGKTIDGGFGVKVGANIYAATKNKDGSFSINTTEYTDKGGNTK 363
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ S + + A E ++ ID +
Sbjct: 364 TALNQLGGADGKTEVVSIDGKTYNASKAAGHNFKAQPELAEAAAATTENPLAKIDAALAQ 423
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 VDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTS 483
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 VLAQANQVPQNVLSLLR 500
>gi|38050069|gb|AAR10653.1| phase 1 flagellin [Salmonella enterica]
Length = 495
Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 72/492 (14%), Positives = 139/492 (28%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVQA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + ++ D + + + + + F
Sbjct: 184 TVENSVKLDTSALTADAIKGGVTGATTAGALKDGKVYSNGTDYYVEVSFADATDSGKNGF 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ T A AA + +G + D A + +
Sbjct: 244 LKVDVNTTTGAVTVPAAAANTVAAKPAGVSEVTEVQGLNTPSSAVQDQLTAAGVSAADAA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY---- 355
+ D K D S+ T
Sbjct: 304 KSEVVKMSYTDKNGKTIDGGFGVKVGDDIYAATKNKDGSISINATEYTDKDGNTKTALNQ 363
Query: 356 ------------------------------------NEKLAMEEMVSFIDTQIKCATAAA 379
E + ID + A
Sbjct: 364 LGGADGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAATTTENPLQKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|204930971|ref|ZP_03221797.1| flagellin [Salmonella enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|38050097|gb|AAR10667.1| phase 1 flagellin [Salmonella enterica]
gi|204320015|gb|EDZ05220.1| flagellin [Salmonella enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
Length = 501
Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 80/498 (16%), Positives = 140/498 (28%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGS-----------------FIRDDNGKVQ 162
++ + FNG L D + A ++
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
+ T G + +V D + Y T
Sbjct: 184 EAVKSGGGATLSTTGLDDTALKAGVGGATSGTAAIKDGKVFFDATDNKYFIEIEGLTAGD 243
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
A + T A + +PA A T + S +V T +
Sbjct: 244 ATKNGVYEVNVADDGTVTMPATAAKVTGGIPATATAVTETQPKPVALSTAVKDQLTDSGI 303
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
+D S T G T V S E
Sbjct: 304 SAADAAKGQLVTMSYTDKNGKTIDGGFGVKVGANIYAATKNKDGSFSINTTEYTDKGGNT 363
Query: 343 TLNITRHANTDAYN-----------------------------EKLAMEEMVSFIDTQIK 373
+ + D E ++ ID +
Sbjct: 364 KTALNQLGGADGKTEVVSIDGKTYNASKAAGHNFKAQPELAEAAAATTENPLAKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|46359069|gb|AAR10750.1| phase 1 flagellin [Salmonella enterica]
Length = 495
Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 69/492 (14%), Positives = 137/492 (27%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDALNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA----- 234
+ + + D ++ D + + + + +
Sbjct: 184 KPAQSIKLDTSALTATAIKDGVTGASTDGALKDGKVYSNGTDYYVEVSFADATDSAKSGF 243
Query: 235 -----------------------------------ANATFDQAKGIATIPVPLPAAPAAP 259
+ A
Sbjct: 244 LKVDVDSATGAVTVPGTAATAAATKPAGVKEVTEVQGKIPASTAIQDQLKAGGVTTADAA 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + + AT K + T+ T +
Sbjct: 304 TAEVVKMSYTDKNGKTIDGGYAVKVGNDYYAATQKKDGSFSVNTTSYTADDGTSKTALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E + ID +
Sbjct: 364 LGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAATTTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|1706840|sp|Q06974|FLIC_SALON RecName: Full=Flagellin; AltName: Full=Phase 1-C flagellin
gi|476242|gb|AAA17860.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Oranienburg]
gi|476244|gb|AAA17861.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Banana]
gi|38050009|gb|AAR10623.1| phase 1 flagellin [Salmonella enterica]
gi|38050011|gb|AAR10624.1| phase 1 flagellin [Salmonella enterica]
gi|308054697|gb|ADO01395.1| flagellin [Salmonella enterica subsp. enterica]
gi|308054701|gb|ADO01397.1| flagellin [Salmonella enterica subsp. enterica]
Length = 508
Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats.
Identities = 81/505 (16%), Positives = 146/505 (28%), Gaps = 56/505 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ Y +D + + + T + N
Sbjct: 184 GDLKSSFKNVTGYDTYAVGANKYRVDVNSGAVVTDTTAPTVPDKVYVNAANGQLTTADAQ 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
+ +V T S A +K + + A T S T
Sbjct: 244 NNTAVDLFKSTKSAAGTDDAKAIATSIKGGKVGDTFDYKGVSFTIDTKAGDDGNGTVSTT 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN------------ 313
+ ++ S + + ++K+ TS + K N
Sbjct: 304 INGEKVTLTISDIGASATDVNSAKIQSSKDVYTSVVSGQFTFADKTKNESAKLSDLEANN 363
Query: 314 -------THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ K ++ N DA K + ++
Sbjct: 364 AVKGESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLA 423
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
ID+ + A +G+I +R + + R+ DAD A+E + +S Q
Sbjct: 424 SIDSALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQ 483
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 ILQQAGTSVLAQANQVPQNVLSLLR 508
>gi|38050131|gb|AAR10684.1| phase 1 flagellin [Salmonella enterica]
Length = 499
Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats.
Identities = 83/496 (16%), Positives = 140/496 (28%), Gaps = 47/496 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ---------ITTIDYYL 170
++ + FNG L D + A I Q D
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVDS 183
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
T LD T G L E +KD V S + TT A
Sbjct: 184 TGVTQSLDLKTAGITGATLKTSITGTTTETGSVKDGKVYYDADSKNYYVEVDFTDTTDKA 243
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPN------------------------------ 260
A G ++ N
Sbjct: 244 AHAGFYKADVDADGNVSLATGATKEAKPTNAVEVEKTIDEKPLKASSSVQDALKASGIAD 303
Query: 261 -----TTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
T + + D + AT + + T+ T
Sbjct: 304 AVAEAATVVKMSYTDKNGKTIDGGYGIKVGDDYYAATKEKDGSYTINSTSYTDKDGNTKT 363
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ S + + A E + ID +
Sbjct: 364 ALNQLGGADGKTEVVSIDGKTYNASKAAGHNFKAQPDLAEAAATTTENPLQKIDAALAQV 423
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 DALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSV 483
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 LAQANQVPQNVLSLLR 499
>gi|54294228|ref|YP_126643.1| flagellin [Legionella pneumophila str. Lens]
gi|53754060|emb|CAH15533.1| flagelline [Legionella pneumophila str. Lens]
Length = 475
Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats.
Identities = 67/470 (14%), Positives = 149/470 (31%), Gaps = 22/470 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++++A + L ++ R+SSGLR++ A D+AA +I+Q M + ++
Sbjct: 4 VINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
G S +A+ M + +++ ++ + SIQSEI+QL+S+L
Sbjct: 64 AVRNANDGISLSQVAEGAMQETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA+ + FNG+ L ++ + + + + T + +
Sbjct: 124 ERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFSIGSIKASSIGGIATATGTEVAGA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI-------------------STK 220
+ I ++ ++ T+
Sbjct: 184 AATDITIAIGGGAATSINSSANFTGALNGQDATSAYAKAAAINDAGIGGLSVTASTSGTQ 243
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ + L + ++ + +
Sbjct: 244 AVGAIGGTAGDTYNLTINGVAIYTNLDVATALTNSDLRDAINGVSNQTGVVASLNGGNMT 303
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+ T + + + + + +D+ + G S
Sbjct: 304 LTAADGRNITVTESGTGFTAGTDGLTVTGGAFDGALRGTLSISAVDTITIGGTVANIGLS 363
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T ++ + + + ID + + +G++ +R ++ +
Sbjct: 364 ANISKDTVGIDSLDVSTASGAQTAIKRIDAALNSVNSNRANMGALQNRFESTIANLQNVS 423
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D + R+ DAD A+E L+ Q QQ L+ N+ +LSL
Sbjct: 424 DNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLL 473
>gi|297058|emb|CAA78774.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Budapest]
Length = 504
Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats.
Identities = 72/502 (14%), Positives = 144/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 122
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 123 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 182
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 183 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAENNT 242
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
T T + K + K + + +TT
Sbjct: 243 AVNLFKTTKSTAGTDEAKAIAGAIKGGKEGDTFDYKGVSFTIDTKAGNDGNGTVSTTING 302
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL 325
+A + ++ + S+ + + ++ +
Sbjct: 303 EKVTLTVADITAGAANVNDATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 362
Query: 326 DSRKDLPKEIDSGYSMVTLNITRHANTDAYN----------------EKLAMEEMVSFID 369
K + + +T T + K + ++ ID
Sbjct: 363 GESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 422
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 423 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 482
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 483 QAGTSVLAQANQVPQNVLSLLR 504
>gi|476246|gb|AAA17862.1| phase 1 flagellin [Salmonella enterica]
Length = 505
Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 139/502 (27%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDDAAPDKVYVNAANGQLTTDDAQNNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T K K + + +TT
Sbjct: 244 AVDLFKTTKSTAGTDDAKAIANVIKGGKEGDTFDYKGVSFTIDTKTGNDGNGTVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + T S N+ V
Sbjct: 304 EKVTLTVADITTGAANVNDATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLAAID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|56413128|ref|YP_150203.1| flagellin [Salmonella enterica subsp. enterica serovar Paratyphi A
str. ATCC 9150]
gi|59802614|sp|P06178|FLIC_SALPA RecName: Full=Flagellin; AltName: Full=Phase 1-A flagellin
gi|56127385|gb|AAV76891.1| flagellin [Salmonella enterica subsp. enterica serovar Paratyphi A
str. ATCC 9150]
Length = 495
Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats.
Identities = 73/492 (14%), Positives = 139/492 (28%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI---------------- 163
++ + FNG L D + A + I Q
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANNGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 164 ------------------------TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+T D + + +ST + + +
Sbjct: 184 EAVTPSATLSTTALDGAGLKTGTGSTTDTGSIKDGKVYYNSTSKNYYVEVEFTDATDQTN 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++V+ A + + T +G A + A
Sbjct: 244 KGGFYKVNVADDGAVTMTAATTKEATTPTGITEVTQVQKPVAAPAAIQAQLTAAHVTGAD 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + AT + T T
Sbjct: 304 TAEMVKMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTEYTDKDGNTKTALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E ++ ID + A
Sbjct: 364 LGGADGKTEVVSIDGKTYNASKAAGHNFKAQPELAEAAAATTENPLAKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|291524949|emb|CBK90536.1| Flagellin and related hook-associated proteins [Eubacterium rectale
DSM 17629]
Length = 455
Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats.
Identities = 70/454 (15%), Positives = 140/454 (30%), Gaps = 5/454 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N A +A++ L +++SSG +++ AAD+AA SI++ M+ L
Sbjct: 2 VVQHNMQAANANRMLNVTTSAQSKSTEKLSSGYKINRAADDAAGLSISEKMRKQIKGLDK 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
S G S V A+ +++ ++ + T D SIQ EI QL +++
Sbjct: 62 ASSNAQDGVSAVQTAEGALTEVHSMLQRMNELATQAANGTNSESDRSSIQDEIDQLTTEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FN L+ G++ +A G +G + T E++ +
Sbjct: 122 DRVSETTKFNETYLLKGQSGTTNKYMAAHDAGFDGTLVDGDTKATFTMKIKAGESLKIGG 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G + + KV + A
Sbjct: 182 TNYDIYATGSGVSDLQDKVGKLTANQEVTIDGTKYTVVDKAGVDEKANKLEATTIAAKIQ 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ T A A + + + + +A + +T + T+
Sbjct: 242 AGSTVNLTPADASKAVKAVDTSKPTSIDVATATQKVTAELQAANDIGAADGKSTVTAGTA 301
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT--RHANTDAYNE 357
T + G+ + +
Sbjct: 302 TADGTIEFAIQKGHASVANTLSFNLHVGADADSTNKITVNIDSMSTAGLGIKGLNVKDST 361
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
A + I I ++ +G++ +R+ + + + + R+ D DMA
Sbjct: 362 GTAATYAIDAIADAISTVSSQRSSLGAVQNRLEHTINNLDNVSENTTSAESRIRDTDMAK 421
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E S Q L+ N S +LSL +
Sbjct: 422 EMVNYSKNNILAQAGQSMLAQANQSNQGVLSLLQ 455
>gi|262273519|ref|ZP_06051333.1| flagellin protein flaB [Grimontia hollisae CIP 101886]
gi|262222497|gb|EEY73808.1| flagellin protein flaB [Grimontia hollisae CIP 101886]
Length = 431
Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats.
Identities = 67/454 (14%), Positives = 138/454 (30%), Gaps = 28/454 (6%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN ++M+A + L +L R+S+GLR++ A D+AA IA M S L
Sbjct: 3 MT-INTNFASMNAQRNLLGTQNSLNTSLQRLSTGLRINSAKDDAAGLQIANRMTSQINGL 61
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ G S A+ + + +++ +++ +D ++ E Q++
Sbjct: 62 NVAKRNANDGISMAQTAEGALQEYTNILHRMRDLGVQAKNGTNSESDRAALNKEFQQMKK 121
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L IA +++ L L + + + S + + + Y +
Sbjct: 122 ELDRIADTTTYGKGENLFEKLEAGVDFQVGADVDSKVLTADDVKEGKLSKYDVQAAVEAG 181
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ L + + LK ++ + L
Sbjct: 182 LAELGLGTSEEDLKKLDAVSKITTKLKTETDGQLSNDINLTDLGVASKEEVESVLADLGI 241
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
A+G + V + + + T
Sbjct: 242 GATVAQGSDSTKVKITLKTGDKDALGKLDTLATALKENVDMTKGELKDINQGEELTALQS 301
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ VD+ + + D
Sbjct: 302 AMEGLGKELKSHDPNVISVKVDSATLDTEKLGD------------------------IAT 337
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ + ID I + +G+ +R + + + + + GR++DAD+A+
Sbjct: 338 ADDAGKAMEAIDAMIDAVGSIRADLGATQNRFQSTINNLGNIAENMAVAKGRIMDADIAA 397
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ES ++ T Q + LS N + + L R
Sbjct: 398 ESANMTKQNTMMQAGITVLSQANQMPSMVSQLLR 431
>gi|148358872|ref|YP_001250079.1| flagellin [Legionella pneumophila str. Corby]
gi|296106919|ref|YP_003618619.1| flagellin [Legionella pneumophila 2300/99 Alcoy]
gi|22080753|emb|CAD43143.1| flagellin [Legionella pneumophila serogroup 6]
gi|22553066|emb|CAD42901.1| flagellin [Legionella longbeachae]
gi|148280645|gb|ABQ54733.1| flagellin [Legionella pneumophila str. Corby]
gi|165968094|gb|ABY75869.1| flagellin [Legionella pneumophila 2300/99 Alcoy]
gi|295648820|gb|ADG24667.1| flagellin [Legionella pneumophila 2300/99 Alcoy]
Length = 475
Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats.
Identities = 67/470 (14%), Positives = 149/470 (31%), Gaps = 22/470 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++++A + L ++ R+SSGLR++ A D+AA +I+Q M + ++
Sbjct: 4 VINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
G S +A+ M + +++ ++ + SIQSEI+QL+S+L
Sbjct: 64 AVRNANDGISLSQVAEGAMQETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA+ + FNG+ L ++ + + + + T + +
Sbjct: 124 ERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFSIGSIKASSIGGIATATGTEVAGA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI-------------------STK 220
+ I ++ ++ T+
Sbjct: 184 AATDITIAIGGGAATSINSSANFTGALNGQDATSAYAKAAAINDAGIGGLSVTASTSGTQ 243
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ + L + ++ + +
Sbjct: 244 AVGAIGGTAGDTYNLTINGVAIYTNLDVATALTNSDLRDAINGVSNQTGVVASLNGGNMT 303
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+ T + + + + + +D+ + G S
Sbjct: 304 LTAADGRNITVTESGTGFTAGTDGLTVTGGAFDGALRGTLSISAVDTIAIGGTVANIGLS 363
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T ++ + + + ID + + +G++ +R ++ +
Sbjct: 364 ANISKDTVGIDSLDVSTASGAQTAIKRIDAALNSVNSNRANMGALQNRFESTIANLQNVS 423
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D + R+ DAD A+E L+ Q QQ L+ N+ +LSL
Sbjct: 424 DNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLL 473
>gi|50830884|gb|AAT81607.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Duisburg]
Length = 506
Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats.
Identities = 74/503 (14%), Positives = 135/503 (26%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR--------------DDNGKVQITT 165
++ + FNG L D + A I +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKEISSKTLGLDKLNVQDAYTPKE 183
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+D T + T + + DI +
Sbjct: 184 TAVIVDRTTYKDGTDTISAQSNADIQTAIGGGATGVTGADIKFKDGQYYLDVKGGAAAGI 243
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT-------------------- 265
+ + D A T
Sbjct: 244 YKATYDETTKKVSIDTTDKTPLTGTAAADIQATTAITKNQVAEVTKGNADTTTVAAQLAA 303
Query: 266 -----------------SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
K+ V ++MG+ K + T +
Sbjct: 304 AGVTGADKDNTSLVKLSFEDKNGKVIDGGYAVKMGDDFYAATYDEKTGTITAKTTTYTDG 363
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
V T + S + + R E + I
Sbjct: 364 TGVAQTGAVKFGGANGKSEVVTATDGKTYLASDLDKHNFRTGGELKEVNTDKTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|38050079|gb|AAR10658.1| phase 1 flagellin [Salmonella enterica]
Length = 500
Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats.
Identities = 76/497 (15%), Positives = 140/497 (28%), Gaps = 48/497 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + S
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ L+ + + A ++ A
Sbjct: 184 EAVKSGGGATLNTAGLNDTALKAGVGGATNGTAAIKDGKVFFDATDNKYFIEVEGLTAGD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW----------- 288
G+ + V P TT G + + A + T +
Sbjct: 244 ATKNGVYEVSVADDGTVTMPATTKVAGGMPATATAVTETQPKPVALSTAVKDQLTDSGIS 303
Query: 289 ----------------------------------VRATTKNSITSDPGYTNSTVAKVGNT 314
AT + T T
Sbjct: 304 AADAAKGQLVTMSYTDKNGKTIDGGFGVKVGANIYAATKNKDGSFSINTTEYTDKGGNTK 363
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ S + + A E ++ ID +
Sbjct: 364 TALNQLGGADGKTEVVSIDGKTYNASKAAGHNFKAQPELAEAAAATTENPLAKIDAALAQ 423
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 VDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTS 483
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 VLAQANQVPQNVLSLLR 500
>gi|308054731|gb|ADO01412.1| flagellin [Salmonella enterica subsp. salamae]
Length = 495
Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats.
Identities = 72/492 (14%), Positives = 136/492 (27%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI---------------- 163
++ + FNG L D + A I Q
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 164 ------------------------TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+T D + + +ST + + +
Sbjct: 184 EAVTPSATLSTTALDGAGLKTGTGSTTDTGSIKDGKVYYNSTSKNYYVEVEFTDATDQTN 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++V+ A + + T +G A + A
Sbjct: 244 KGGFYKVNVADDGAVTMTAATTKEATTPTGITEVTQVQKPVAAPAAIQAQLTAAHVTGAD 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + AT + T T
Sbjct: 304 TAEMVKMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTKYTDKDGNTKSALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E + ID +
Sbjct: 364 LGGADGKTEVVSIDGKTYNASKAEGHNFKAQPDLAEAATTTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|262273518|ref|ZP_06051332.1| flagellin protein flaB [Grimontia hollisae CIP 101886]
gi|262222496|gb|EEY73807.1| flagellin protein flaB [Grimontia hollisae CIP 101886]
Length = 431
Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats.
Identities = 73/455 (16%), Positives = 142/455 (31%), Gaps = 30/455 (6%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN ++M+A + L +L R+S+GLR++ A D+AA IA M S L
Sbjct: 3 MT-INTNFASMNAQRNLLGTQSSLNTSLQRLSTGLRINSAKDDAAGLQIANRMTSQINGL 61
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ G S A+ + + +++ +++ +D ++ E Q++
Sbjct: 62 NVAKRNANDGISMAQTAEGALQEYTNILHRMRDLGVQAKNGTNSESDRAALNKEFQQMKK 121
Query: 118 QLRDIARGSSFNG-ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+L IA +++ EN + V + D+ +
Sbjct: 122 ELDRIADTTTYGKGENLFEKLEAGVDFQVGADVDSKVLTADDVTEGKLSKYDVQAAVEAG 181
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
L GT L + K+ ++ + D + S
Sbjct: 182 LAELGLGTSEEDLKKLDAVSKITTKLKTETDGAESGNITYASLGVAN----------EEE 231
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
V + T T + + + GN D +
Sbjct: 232 LKAVLEDLGIQATVSDQSDGTNVKVTLKTGDKDNLEKLDALASVLEGNVDTGKGELKDIA 291
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
D + + +G D + + G
Sbjct: 292 DGKDLSQLQAAMTALGKELKSHDPNVINVKVDSTMLDTEKLGD---------------IA 336
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + ID I + +G+ +R + + + + + GR++DAD+A
Sbjct: 337 TAEDAGKAMEAIDNMIDAVGSIRADLGATQNRFQSTINNLGNIAENMAVAKGRIMDADIA 396
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ES ++ T Q + LS N + + L R
Sbjct: 397 AESANMTKQNTMMQAGITVLSQANQMPSMVSQLLR 431
>gi|308054737|gb|ADO01415.1| flagellin [Salmonella enterica subsp. salamae]
Length = 495
Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats.
Identities = 71/492 (14%), Positives = 136/492 (27%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI---------------- 163
++ + FNG L D + A I Q
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 164 ------------------------TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+T + + + +ST + + +
Sbjct: 184 EAVTPSATLSTTTLDGAGLKTGTGSTTNTGSIKDGKVYYNSTSKNYYVEVEFTDATDQTN 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++V+ A + + T +G A + A
Sbjct: 244 KGGFYKVNVADDGAVTMTAATTKETTTPTGITEVTQVQKPVAAPAAIQAQLTAAHVTGAD 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + AT + T T
Sbjct: 304 TAEMVKMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTKYTDKDGNTKSALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E + ID +
Sbjct: 364 LGGADGKTEVVSIDGKTYNASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|38049710|gb|AAR10474.1| phase 2 flagellin [Salmonella enterica]
gi|38049870|gb|AAR10554.1| phase 2 flagellin [Salmonella enterica]
gi|38049872|gb|AAR10555.1| phase 2 flagellin [Salmonella enterica]
Length = 495
Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats.
Identities = 75/492 (15%), Positives = 142/492 (28%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVDS 183
Query: 180 ----------------------------------------STDGTERYGLLDRNHKIKVE 199
++ Y +D
Sbjct: 184 KAVTPPAKLDIAGLTGTAIKTGVDSATVDTGSIKDGKVYYNSTSKNYYVEVDFGTSADAA 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++V+ ++ + T +G A + A
Sbjct: 244 KSGYYKVNVADDGTVSMTASTTKEATTPTGITEVTQVQKPVAAPAAIQAQLTAAHVTGAD 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + D + AT K + T+ T A +
Sbjct: 304 TAEMVKMSYTDKNGKTIDGGYAVKVGDDYYAATQKKDGSFSINTTSYTAADGTSKTALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E + ID +
Sbjct: 364 LGGADGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|297013|emb|CAA78781.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Senftenberg]
gi|555652|gb|AAA53498.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Simsbury]
Length = 504
Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats.
Identities = 72/502 (14%), Positives = 145/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 122
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 123 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 182
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 183 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDDAAPDKVYVNAANGQLTTDDAENNT 242
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
T T + K ++ K + + +TT
Sbjct: 243 AVNLFKTTKSTAGTDEAKAIASAIKGGKEGDTFDYKGVSFTIDTKAGNDGNGTVSTTING 302
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL 325
+A + ++ + S+ + + ++ +
Sbjct: 303 EKVTLTVADITAGAANVNDATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 362
Query: 326 DSRKDLPKEIDSGYSMVTLNITRHANTDAYN----------------EKLAMEEMVSFID 369
K + + +T T + K + ++ ID
Sbjct: 363 GESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 422
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 423 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 482
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 483 QAGTSVLAQANQVPQNVLSLLR 504
>gi|1706834|sp|Q06969|FLIC_SALBU RecName: Full=Flagellin; AltName: Full=Phase 1-C flagellin
gi|50830914|gb|AAT81622.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Budapest]
Length = 505
Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats.
Identities = 72/502 (14%), Positives = 144/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
T T + K + K + + +TT
Sbjct: 244 AVNLFKTTKSTAGTDEAKAIAGAIKGGKEGDTFDYKGVSFTIDTKAGNDGNGTVSTTING 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL 325
+A + ++ + S+ + + ++ +
Sbjct: 304 EKVTLTVADITAGAANVNDATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 326 DSRKDLPKEIDSGYSMVTLNITRHANTDAYN----------------EKLAMEEMVSFID 369
K + + +T T + K + ++ ID
Sbjct: 364 GESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|38050129|gb|AAR10683.1| phase 1 flagellin [Salmonella enterica]
Length = 499
Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats.
Identities = 83/496 (16%), Positives = 140/496 (28%), Gaps = 47/496 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ---------ITTIDYYL 170
++ + FNG L D + A I Q D
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVDS 183
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
T LD T G L E +KD V S + TT A
Sbjct: 184 TGVTQSLDLKTAGITGATLKAGITGTTTETGSVKDGKVYYDADSKNYYVEVDFTDTTDKA 243
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPN------------------------------ 260
A G ++ N
Sbjct: 244 AHAGFYKAGVDADGNVSLATGATKEAKPTNAVEVEKTIDEKPLKASSSVQDALKASGIAD 303
Query: 261 -----TTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
T + + D + AT + + T+ T
Sbjct: 304 AVAEAATVVKMSYTDKNGKTIDGGYGIKVGDDYYAATKEKDGSYSINSTSYTDKDGNTKT 363
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ S + + A E + ID +
Sbjct: 364 ALNQLGGADGKTEVVSIDGKTYNASKAAGHNFKAQPDLAEAAATTTENPLQKIDAALAQV 423
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 DALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSV 483
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 LAQANQVPQNVLSLLR 499
>gi|120613036|ref|YP_972714.1| flagellin domain-containing protein [Acidovorax citrulli AAC00-1]
gi|120591500|gb|ABM34940.1| flagellin domain protein [Acidovorax citrulli AAC00-1]
gi|146262381|gb|ABQ15206.1| flagellin [Acidovorax citrulli]
gi|146262383|gb|ABQ15207.1| flagellin [Acidovorax citrulli]
gi|324034929|gb|ADY17229.1| flagellin [Acidovorax citrulli]
Length = 492
Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats.
Identities = 74/490 (15%), Positives = 145/490 (29%), Gaps = 40/490 (8%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I TN S+++A + L +L R+SSGLR++ A D+AA +I++ S L+
Sbjct: 3 STINTNVSSLTAQRNLSLSQSSLNTSIQRLSSGLRINSAKDDAAGLAISERFTSQIRGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S A+ + D++ ++ D K+IQ+E+ QL S+
Sbjct: 63 QAVRNANDGISLAQTAEGALKSTGDILQRVRELAVQSANATNSSGDRKAIQAEVGQLLSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG+ L GS+T + + + +
Sbjct: 123 MDRIAGNTEFNGQKLLDGSFGSATFQVGANANQTITATTGNFRTNNYGAQLTASASGAAT 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ ++ + + + + A +
Sbjct: 183 TGATAGSAGAAAGTVVISGLQTKTVNVAAAGTAADIASAVNAVADSTGVTAAARNVSELK 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD------------ 286
F + A + + + A + + +
Sbjct: 243 FSGTGSFTLAVKGDNSTAANVTFNVSATSTAAGLAEAVKAFNDVSSQTGITAKLNSDSSG 302
Query: 287 -------------------------IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
ATT S + T + A E
Sbjct: 303 LILTNESGKDINLANGASSAAGITLASQDATTTQSSGTLTFTTATAAATGVTVASRGTVE 362
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ + T + + + + + ID +
Sbjct: 363 YKSDKGYTVNGTGDTMTTTAATASTLTKVSDIDVSTVDGSTKALKIIDAALAAVNGQRAS 422
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
G++ SR + ++ + + R+ DAD A+E+ LS Q QQ ++ N
Sbjct: 423 FGALQSRFETTVNNLQSTSENMSASRSRIQDADFAAETANLSRSQILQQAGTAMVAQANQ 482
Query: 442 STARILSLFR 451
+LSL R
Sbjct: 483 LPQGVLSLLR 492
>gi|168259757|ref|ZP_02681730.1| flagellin [Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
gi|50830952|gb|AAT81641.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Haifa]
gi|205351070|gb|EDZ37701.1| flagellin [Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
Length = 499
Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats.
Identities = 83/496 (16%), Positives = 140/496 (28%), Gaps = 47/496 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ---------ITTIDYYL 170
++ + FNG L D + A I Q D
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVDS 183
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
T LD T G L E +KD V S + TT A
Sbjct: 184 TGVTQSLDLKTAGITGATLKAGITGTTTETGSVKDGKVYYDADSKNYYVEVDFTDTTDKA 243
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPN------------------------------ 260
A G ++ N
Sbjct: 244 AHAGFYKADVDADGNVSLATGATKEAKPTNAVEVEKTIDEKPLKASSSVQDALKASGIAD 303
Query: 261 -----TTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
T + + D + AT + + T+ T
Sbjct: 304 AVAEAATVVKMSYTDKNGKTIDGGYGIKVGDDYYAATKEKDGSYSINSTSYTDKDGNTKT 363
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ S + + A E + ID +
Sbjct: 364 ALNQLGGADGKTEVVSIDGKTYNASKAAGHNFKAQPDLAEAAATTTENPLQKIDAALAQV 423
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 DALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSV 483
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 LAQANQVPQNVLSLLR 499
>gi|113911635|gb|ABI48299.1| Fla2 flagellin [Lachnospiraceae bacterium A4]
Length = 449
Score = 216 bits (548), Expect = 7e-54, Method: Composition-based stats.
Identities = 65/446 (14%), Positives = 136/446 (30%), Gaps = 10/446 (2%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ L +L +++SSG +V+ AAD+AA SI++ M+ LS S G S V
Sbjct: 3 RMLGITQGSLNKSTEKLSSGYKVNRAADDAAGLSISEKMRKQIRGLSQASLNAEDGISAV 62
Query: 75 DIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
A+ +++ D++ + G +D ++IQ E+ QL +++ +A + FN
Sbjct: 63 QTAEGALTEVHDMLQRMNELAVKAANGTNSTSDRQTIQDEVDQLLTEIDRVAETTKFNEL 122
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
L+ D T ++ G G T L ++ + +
Sbjct: 123 YTLKGDEDKVTRYLSAHDAGIEGTLTQGATNATFSMDQLKFGDTIMIAGREYHISGTQKQ 182
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
+ I ++ + + + + T + + L A T +
Sbjct: 183 QGEIITSSVKIGQQVTIDGIMYTCTATVSNADKFELTKDDLIAKLDTSSLSIMSVNGXXX 242
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+G + + V
Sbjct: 243 XXXXXXXXXXXXXXXXXXXXXQKELGLASSIGADGSTQASVNAGVDGKTLKKPSFEGKWV 302
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI-------TRHANTDAYNEKLAMEEM 364
+ +D + + D + A
Sbjct: 303 FSIDKGSVQVREDIDFSLHVGADADMNNKIAVKIGALDTKGLGIQGLNVKDTTGAAATYA 362
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ I + +A +G++ +R+ + + + + ++ D DMA+E + S
Sbjct: 363 IDSIADAVARISAQRSLLGAVQNRLEHTINNLDNVVENTTAAESQIRDTDMATEMVKYSN 422
Query: 425 LQTQQQLAVQALSIVNNSTARILSLF 450
Q L+ N + +LSL
Sbjct: 423 NNVLAQAGQSMLAQSNQANQGVLSLL 448
>gi|46359071|gb|AAR10751.1| phase 1 flagellin [Salmonella enterica]
Length = 495
Score = 216 bits (548), Expect = 7e-54, Method: Composition-based stats.
Identities = 68/492 (13%), Positives = 132/492 (26%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDALNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA----- 234
+ + D ++ D + + + +
Sbjct: 184 KPAQSIKLDTSALTATAIKNGVTGASTDGALKDGKVYSNGTDYYVEVSFADATDTAKGGF 243
Query: 235 -----------------------------------ANATFDQAKGIATIPVPLPAAPAAP 259
+ A
Sbjct: 244 LKVDVDSATGAVTVPGTAATAAATKPAGVKEVTEVQGKIPASTAIQDQLKAGGVTTADAA 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + + AT K + T+ T +
Sbjct: 304 TAEVVKMSYTDKNGKTIDGGYAVKVGNDYYAATQKKDGSFSVNTTSYTADDGTSKTALNK 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E + ID +
Sbjct: 364 LGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAATTTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + D+D A E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVXNLTSARSXIEDSDYAXEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|22553058|emb|CAD42896.1| flagellin [Legionella pneumophila serogroup 1]
Length = 475
Score = 216 bits (548), Expect = 7e-54, Method: Composition-based stats.
Identities = 67/470 (14%), Positives = 149/470 (31%), Gaps = 22/470 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++++A + L ++ R+SSGLR++ A D+AA +I+Q M + ++
Sbjct: 4 VINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
G S +A+ M + +++ ++ + SIQSEI+QL+S+L
Sbjct: 64 AVRNANDGISLSQVAEGAMQETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA+ + FNG+ L ++ + + + + T + +
Sbjct: 124 ERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFSIGSIKASSIGGIATATGTEVAGA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI-------------------STK 220
+ I ++ ++ T+
Sbjct: 184 AATDITIAIGGGAATSINSSANFTGALNGQDATSAYAKAAAINDAGIGGLSVTASTSGTQ 243
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ + L + ++ + +
Sbjct: 244 AVGAIGGTAGDTYNLTINGVAIYTNLNVATALTNSDLRDAINGVSNQTGVVASLNGGNMT 303
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+ T + + + + + +D+ + G S
Sbjct: 304 LTAADGRNITVTESGTGFTAGTDGLTVTGGAFDGALRGTLSISAVDTIAIGGTVANIGLS 363
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T ++ + + + ID + + +G++ +R ++ +
Sbjct: 364 ANISKDTVGIDSLDVSTASGAQTAIKRIDAALNSVNSNRANMGALQNRFESTIANLQNVS 423
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D + R+ DAD A+E L+ Q QQ L+ N+ +LSL
Sbjct: 424 DNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLL 473
>gi|38050257|gb|AAR10747.1| phase 1 flagellin [Salmonella enterica]
Length = 505
Score = 216 bits (548), Expect = 7e-54, Method: Composition-based stats.
Identities = 75/502 (14%), Positives = 141/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSTLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 244 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVSFTIDTKAGNDGNGTVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 304 EKVTLTVADITAGAADVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLAAID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|1706842|sp|Q06983|FLIC_SALSE RecName: Full=Flagellin; AltName: Full=Phase 1-C flagellin
gi|38049997|gb|AAR10617.1| phase 1 flagellin [Salmonella enterica]
gi|38049999|gb|AAR10618.1| phase 1 flagellin [Salmonella enterica]
gi|308054703|gb|ADO01398.1| flagellin [Salmonella enterica subsp. enterica]
gi|308054707|gb|ADO01400.1| flagellin [Salmonella enterica subsp. enterica]
gi|308054709|gb|ADO01401.1| flagellin [Salmonella enterica subsp. enterica]
Length = 505
Score = 216 bits (548), Expect = 8e-54, Method: Composition-based stats.
Identities = 72/502 (14%), Positives = 145/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDDAAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
T T + K ++ K + + +TT
Sbjct: 244 AVNLFKTTKSTAGTDEAKAIASAIKGGKEGDTFDYKGVSFTIDTKAGNDGNGTVSTTING 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL 325
+A + ++ + S+ + + ++ +
Sbjct: 304 EKVTLTVADITAGAANVNDATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 326 DSRKDLPKEIDSGYSMVTLNITRHANTDAYN----------------EKLAMEEMVSFID 369
K + + +T T + K + ++ ID
Sbjct: 364 GESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|38049888|gb|AAR10563.1| phase 2 flagellin [Salmonella enterica]
gi|308054855|gb|ADO01474.1| flagellin [Salmonella enterica subsp. diarizonae]
Length = 498
Score = 216 bits (548), Expect = 8e-54, Method: Composition-based stats.
Identities = 69/495 (13%), Positives = 139/495 (28%), Gaps = 46/495 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ L ++ ++ V + K +
Sbjct: 184 KAVTDAKTIDLSALNEAALKAGTTGTTGAPVVKDDKIYYDEASKNYYVEVDGFTTGDVGK 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + A+ + ++ + T T+
Sbjct: 244 NGFYKVTVDADGKATMAASTTMEAAKPAGAVEVTKTQTETPVKLSAALKKSLTDGGVDTA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN--- 356
G + + + + ++N T + D +
Sbjct: 304 AAGTAQIVKMSYTDKNGKTIDGGYAVKVGDNYYAATQKKDGSFSVNTTSYTAADGTSKTA 363
Query: 357 ----------------------------------------EKLAMEEMVSFIDTQIKCAT 376
E + ID +
Sbjct: 364 LNQLGGADGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQVD 423
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
+G++ +R + + + + R+ D+D A+E + +S Q QQ L
Sbjct: 424 TLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVL 483
Query: 437 SIVNNSTARILSLFR 451
+ N +LSL R
Sbjct: 484 AQANQVPQNVLSLLR 498
>gi|296103621|ref|YP_003613767.1| Phase 1 flagellin [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295058080|gb|ADF62818.1| Phase 1 flagellin [Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 504
Score = 216 bits (548), Expect = 8e-54, Method: Composition-based stats.
Identities = 67/501 (13%), Positives = 131/501 (26%), Gaps = 52/501 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L L R+SSG+R++ A D+AA +I+ S ++
Sbjct: 4 VINTNALSLMAQNNLNKSQTQLGTAIQRLSSGMRINSAKDDAAGLAISNRFTSSIRGMTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + + + + M I+ +D SI+ EIT ++
Sbjct: 64 AARNANDGISLAQTTEGALEEVTENMQRIRELTVQAKNGTNSASDLDSIKKEITTRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A ++FNG T I + + T + +
Sbjct: 124 GRVAETTNFNGVKVFDGSKEKITIQIGDKDEDTIDIKLSKLDMETLGLDKFMDDFADIGI 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ +G K ++ L T A +
Sbjct: 184 TVNGAGTASSQYDKAATKAVAGTTMIDVGQAAGGWKYVTGDATTLKNTIKAADANDVEVY 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + S + S A +++ A +
Sbjct: 244 TLDDKVFAYDKTKKKMFELDVSKMSFSQDGTNSWAKLDAAPEAAATEVTDPADVDMLLNG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDT--------------------------------------- 320
TN +G+T D
Sbjct: 304 PSKLTNPVKLNLGDTIKAADNADVVLDETQLNAIANSAFGQDAEAAGMQLFSVTEGAATK 363
Query: 321 ----------ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
++ + G + + +++ +D
Sbjct: 364 VFAYGKNAAGDTIVTEVEFATGGATPGGLNTPAARPADVEFIRKEAGDSLADGLLAKLDE 423
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ +G++ +R + + R+ DAD + E + +S QQ
Sbjct: 424 ALTTVADFRADLGAVQNRFSSIIANLNTNIINTTEARSRIQDADFSVEVSAMSRANILQQ 483
Query: 431 LAVQALSIVNNSTARILSLFR 451
V L+ N +LSL R
Sbjct: 484 AGVSVLAQANQVPQNVLSLLR 504
>gi|476252|gb|AAA17865.1| phase 1 flagellin [Salmonella enterica]
Length = 508
Score = 216 bits (548), Expect = 9e-54, Method: Composition-based stats.
Identities = 83/505 (16%), Positives = 147/505 (29%), Gaps = 56/505 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSTLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ Y +D + + + T + N
Sbjct: 184 GDLKSSFKNVTGYDTYAVGANKYRVDINSGAVVTDTTAPTVPDKVYVNAANGQLTTDDAQ 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
+ +V TIS A +K A + + A T S T
Sbjct: 244 NNTAVDLFKSTISAAGTDDAKAIATSIKGGKAGDTFDYKGVSFTIDTKAGDDGNGTVSTT 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN------------ 313
+ ++ S + + ++K+ TS + K N
Sbjct: 304 INGEKVTLTISDIATSATDVNGAKIQSSKDVYTSVVSGQFTFDDKTKNESAKLSDLEANN 363
Query: 314 -------THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ K ++ N DA K + ++
Sbjct: 364 AVKGESKITVNGAEYTANATGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLA 423
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
ID+ + A +G+I +R + + R+ DAD A+E + +S Q
Sbjct: 424 AIDSALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQ 483
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 ILQQAGTSVLAQANQVPQNVLSLLR 508
>gi|38050085|gb|AAR10661.1| phase 1 flagellin [Salmonella enterica]
gi|50830934|gb|AAT81632.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Kinshasa]
Length = 500
Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats.
Identities = 76/497 (15%), Positives = 137/497 (27%), Gaps = 48/497 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + S
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ L + S A ++ A
Sbjct: 184 EAVKSGGGATLSTTGLDDAALKTGVGGATSGTAAIKDGKVFFDATDNKYFIEVEGLTAGD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW----------- 288
G+ + V P TT G + + A + T +
Sbjct: 244 ATKNGVYEVSVADDGTVTMPATTKVAGGMPATATAVTETQPKPVALSTAVKDQLTDSGIS 303
Query: 289 ----------------------------------VRATTKNSITSDPGYTNSTVAKVGNT 314
AT + T T
Sbjct: 304 AADAAKGQLVTMSYTDKNGKTIDGGFGVKVGANIYAATKNKDGSFSINTTEYTDKGGNTK 363
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ S + + A E + ID +
Sbjct: 364 TALNQLGGADGKTEVVSIDGKTYNASKAAGHNFKAQPDLAEAAATTTENPLQKIDAALAQ 423
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 VDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTS 483
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 VLAQANQVPQNVLSLLR 500
>gi|2583084|gb|AAB82610.1| flagellin A protein [Butyrivibrio fibrisolvens]
Length = 472
Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats.
Identities = 69/471 (14%), Positives = 133/471 (28%), Gaps = 22/471 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N A +AS+ L + +++SSG +++ AAD+AA SI++ M+ L
Sbjct: 2 VVQHNMQAANASRMLGITTGDQSKSTEKLSSGFKINRAADDAAGLSISEKMRKQIRGLDQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
S G S V A+ +++ ++ + D SIQ EI QL +++
Sbjct: 62 ASTNASDGISAVQTAEGALTEVHSMLQRMNELAVQAANGTNSESDRSSIQDEINQLTTEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FN L+ G T + G + T L+
Sbjct: 122 DRVAETTKFNETYLLKGGNGDRTVRVYAHDAGLVGSLSQNTTKATFQMRKLEIGDSYTIG 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T + D + K + T +
Sbjct: 182 GTTYKIGAETVKEAMTALKITSAASSSDDKITALKTGDVIKIDGKSFTIDENETDMEQSR 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATT------ 293
+A I + T + + + +
Sbjct: 242 IKATMINKLAGAGSTLEFNGRVTVFSVDVGTGVNGVDPNNKTLITATAAYFRVKTELIAA 301
Query: 294 -------------KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+ + + + K +
Sbjct: 302 SSVGATNTRAAIIGDPDIGATYVNFTITRGDVISKNTLVFTLHVGSDADMTNKIGVEIDT 361
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
M ++ H + + A + I + +A +GSI +R+ + +
Sbjct: 362 MDAKSLGIHGMNVSDDTGKAATYAIDAISDALAKVSAQRSALGSIQNRLEHSIANLDNVV 421
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ R+ D DMA E S Q L+ N +T +LS+ +
Sbjct: 422 ENTNAAESRIRDTDMADEMVTYSKNNILMQAGQSMLAQANQATQGVLSILQ 472
>gi|38050211|gb|AAR10724.1| phase 1 flagellin [Salmonella enterica]
Length = 494
Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats.
Identities = 70/491 (14%), Positives = 132/491 (26%), Gaps = 42/491 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ----------------- 162
++ + FNG L D + A I Q
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVQA 183
Query: 163 ----------------------ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
+ + + TD D K
Sbjct: 184 TVENSVKLDTSALTADAIKGGVTGATTAGALKDGKVYSNGTDYYVEVSFADAADSGKNGF 243
Query: 201 QVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPN 260
+ + + + + + +A A
Sbjct: 244 LKVDVNTTTGAVTVPAAANTVAAKPAGVSEVTEVQGLNTPSSAVQDQLTAAGVSAADAAK 303
Query: 261 TTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDT 320
+ + + D AT + T T
Sbjct: 304 SEVVKMSYTDKNGKTIDGGFGIKVGDDIYAATKNKDGSISINATEYTDKDGNTKTALNQL 363
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
+ S + + A E + ID + A
Sbjct: 364 GGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDALRS 423
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+ N
Sbjct: 424 DLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQAN 483
Query: 441 NSTARILSLFR 451
+LSL R
Sbjct: 484 QVPQNVLSLLR 494
>gi|52841570|ref|YP_095369.1| flagellin [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|52628681|gb|AAU27422.1| flagellin [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
Length = 475
Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats.
Identities = 67/470 (14%), Positives = 149/470 (31%), Gaps = 22/470 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++++A + L ++ R+SSGLR++ A D+AA +I+Q M + ++
Sbjct: 4 VINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
G S +A+ M + +++ ++ + SIQSEI+QL+S+L
Sbjct: 64 AVRNANDGISLAQVAEGAMQETTNILQRMRELSVQAANSTNNSSDRSSIQSEISQLKSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA+ + FNG+ L ++ + + + + T + +
Sbjct: 124 ERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFSIGSTKASSLGGIATATGTEVAGA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI-------------------STK 220
+ I ++ ++ T+
Sbjct: 184 AAADITIAIGGGAATSINSSANFTGALNGQDATSAYAKAAAINDAGIGGLSVTASTSGTQ 243
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ + L + ++ + +
Sbjct: 244 AVGAIGGTAGDTYNLTINGVAIYTNLNVATALTNSDLRDAINGVSNQTGVVASLNGGNMT 303
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+ T + + + + + +D+ + G S
Sbjct: 304 LTAADGRNITVTESGTGFTAGTDGLTVTGGAFDGALRGTLSISAVDTIAIGGTVANIGLS 363
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T ++ + + + ID + + +G++ +R ++ +
Sbjct: 364 ANISKDTVGIDSLDVSTASGAQTAIKRIDAALNSVNSNRANMGALQNRFESTIANLQNVS 423
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D + R+ DAD A+E L+ Q QQ L+ N+ +LSL
Sbjct: 424 DNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLL 473
>gi|38050001|gb|AAR10619.1| phase 1 flagellin [Salmonella enterica]
Length = 505
Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats.
Identities = 72/502 (14%), Positives = 145/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
T T + K ++ K + + +TT
Sbjct: 244 AVNLFKTTKSTAGTDEAKAIASAIKGGKEGDTFDYKGVSFTIDTKAGNDGNGTVSTTING 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL 325
+A + ++ + S+ + + ++ +
Sbjct: 304 EKVTLTVADITAGAANVNDATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 326 DSRKDLPKEIDSGYSMVTLNITRHANTDAYN----------------EKLAMEEMVSFID 369
K + + +T T + K + ++ ID
Sbjct: 364 GESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|38050073|gb|AAR10655.1| phase 1 flagellin [Salmonella enterica]
gi|38050075|gb|AAR10656.1| phase 1 flagellin [Salmonella enterica]
gi|38050089|gb|AAR10663.1| phase 1 flagellin [Salmonella enterica]
gi|50830930|gb|AAT81630.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Brandenburg]
gi|50830932|gb|AAT81631.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Panama]
gi|60549985|gb|AAX24137.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Brandenburg]
Length = 500
Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats.
Identities = 77/497 (15%), Positives = 141/497 (28%), Gaps = 48/497 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + S
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ L+ + + A ++ A
Sbjct: 184 EAVKSGGGATLNTTGLNDAALKTGVGGATNGTAAIKDGKVFFDATDNKYFIEVEGLTAGD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW----------- 288
G+ + V P TT T G + + A + T +
Sbjct: 244 ATKNGVYEVSVADDGTVTMPTTTKVTGGMPATATAVTETQPKPVALSTAVKDQLTDSGIS 303
Query: 289 ----------------------------------VRATTKNSITSDPGYTNSTVAKVGNT 314
AT + T T
Sbjct: 304 AADAAKGQLVTMSYTDKNGKTIDGGFGVKVGANIYAATKNKDGSFSINTTEYTDKGGNTK 363
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ S + + A E ++ ID +
Sbjct: 364 TALNQLGGADGKTEVVSIDGKTYNASKAAGHNFKAQPELAEAAATTTENPLAKIDAALAQ 423
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 VDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTS 483
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 VLAQANQVPQNVLSLLR 500
>gi|38049682|gb|AAR10470.1| flagellin [Salmonella bongori]
Length = 497
Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats.
Identities = 67/494 (13%), Positives = 135/494 (27%), Gaps = 45/494 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYKVSD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + + G + + +
Sbjct: 184 TAATVTGYADTAIALDNSTFKASATGLGGTDQQIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + + A T + +
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVKNVQVANADLTEAKAALTAAGVAA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY---- 355
+ ++ N +D + S+ A+
Sbjct: 304 ADTASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKSAL 363
Query: 356 --------------------------------------NEKLAMEEMVSFIDTQIKCATA 377
E + ID + A
Sbjct: 364 NQLGGVDGKTEVVTIDGKTYNASKAEGHNFKAQPELAEAATATTENPLQKIDAALAQVDA 423
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 LRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLA 483
Query: 438 IVNNSTARILSLFR 451
N +LSL R
Sbjct: 484 QANQVPQNVLSLLR 497
>gi|315296489|gb|EFU55786.1| bacterial flagellin [Escherichia coli MS 16-3]
Length = 490
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 75/487 (15%), Positives = 146/487 (29%), Gaps = 38/487 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ ++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR-------------------DDNGK 160
++ + FNG L + A I
Sbjct: 124 DRVSEQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATG 183
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ + + ++ + + T ++ V + +
Sbjct: 184 SDLISKFKATGTDNYQINGTDNYTVNVDSGAVQNEDGDAIFVSATDGSLTTKSDTKVGGT 243
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ A + A + +GI A + N T + A+
Sbjct: 244 GIDATGLAKAAVSLAKDASIKYQGITFTNKGTGAFDGSGNGTLTANIDGKDVTFTIASSA 303
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
D + + S +T + V T +D + + D S
Sbjct: 304 DATGKDATLTTSDPVYKNSAGQFTTTKVENKAATASDLDLNNAKKVGSSLVVNGADYEVS 363
Query: 341 MVTLNITRHANTDAYN----------------EKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+T T + + + ID + +G+
Sbjct: 364 ADGKTVTGLGKTMYLSKSEGGSPILVNEDAAKSLQSATNPLETIDKALAKVDNLRSDLGA 423
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
+ +R + + + R+ DAD A+E + +S Q QQ L+ N +T
Sbjct: 424 VQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQTTQ 483
Query: 445 RILSLFR 451
+LSL R
Sbjct: 484 NVLSLLR 490
>gi|38049850|gb|AAR10544.1| phase 2 flagellin [Salmonella enterica]
Length = 500
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 76/497 (15%), Positives = 140/497 (28%), Gaps = 48/497 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + S
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKKYDVKS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ L+ + + A ++ A
Sbjct: 184 EAVKSGGGATLNTAGLNDTALKAGVGGATNGTAAIKDGKVFFDATDNKYFIEVEGLTAGD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW----------- 288
G+ + V P TT G + + A + T +
Sbjct: 244 ATKNGVYEVSVADDGTVTMPATTKVAGGMPATATAVTETQPKPVALSTAVKDQLTDSGIS 303
Query: 289 ----------------------------------VRATTKNSITSDPGYTNSTVAKVGNT 314
AT + T T
Sbjct: 304 AADAAKGQLVTMSYTDKNGKTIDGGFGVKVGANIYAATKNKDGSFSINTTEYTDKGGNTK 363
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ S + + A E + ID +
Sbjct: 364 TALNQLGGADGKTEVVTIDGKTYNASKAAGHNFKAQPELAEAAAKTTENPLQKIDAALAQ 423
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 VDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTS 483
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 VLAQANQVPQNVLSLLR 500
>gi|118416419|gb|ABK84838.1| flagellin [Bacillus thuringiensis str. Al Hakam]
Length = 488
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 71/451 (15%), Positives = 150/451 (33%), Gaps = 5/451 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++ + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 40 INTNINSLRTQEYMRQNQTKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 99
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + M+ +++ +++ ++ ++Q E ++LQ Q+
Sbjct: 100 ANNTQDGMSLIRTADSAMNSVSNILLRMRDIANQSANGTNTDSNKSALQKEFSELQKQIT 159
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L D ++ S I D V + ++ ++ ++
Sbjct: 160 YIADNTQFNDKNLLNADSEVKIQTLDSSNGDQQIGIDLKAVTL--EKLGINNISIGSATT 217
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D + ++ + + A I T T +
Sbjct: 218 ADLKQTDIEAVSTKIAALDKDSVAKDITDIKAAIDKIKDGMKPEDVTKLNAALDGFKTGE 277
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A + A ++ S + + T +
Sbjct: 278 ADDDAAGVTAIKTALSKVELPKGSFEVAQKDLDDVSTKIAALDKDSVAKDITDIKAAIDK 337
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
++ D I + S V L N K
Sbjct: 338 IKDGMKPEDVTKLNAALDGFKTGEADDDAAGVTAIKTALSKVELPKLGDTIKPTTNSKAD 397
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
V+ ID + +G+ +R+ + +K A+ ++ DADMA E +
Sbjct: 398 SLAAVAAIDKALTTVADNRATLGATLNRLDFNVNNLKSQSSAMAASASQIEDADMAKEMS 457
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + + + LS N + + L +
Sbjct: 458 EMTKFKILNEAGISMLSQANQTPQMVSKLLQ 488
>gi|38050093|gb|AAR10665.1| phase 1 flagellin [Salmonella enterica]
Length = 501
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 79/498 (15%), Positives = 139/498 (27%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGS-----------------FIRDDNGKVQ 162
++ + FNG L D + A ++
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
+ G + +V D + Y T
Sbjct: 184 EAVKSGGGATLSTTGLDDAALKAGVGGATSGTAAIKDGKVFFDATDNKYFIEVEGLTAGD 243
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
A + T A + +PA A T + S +V T +
Sbjct: 244 ATKNGVYEVNVADDGTVTMPATAAKVTGGIPATATAVTETQPKPVALSTAVKDQLTDSGI 303
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
+D S T G T V S E
Sbjct: 304 SAADAAKGQLVTMSYTDKNGKTIDGGFGVKVGANIYAATKNKDGSFSINTTEYTDKGGNT 363
Query: 343 TLNITRHANTDAYN-----------------------------EKLAMEEMVSFIDTQIK 373
+ + D E ++ ID +
Sbjct: 364 KTALNQLGGADGKTEVVSIDGKTYNASKAAGHNFKAQPELAEAAATTTENPLAKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|38049686|gb|AAR10472.1| flagellin [Salmonella bongori]
Length = 494
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 76/491 (15%), Positives = 146/491 (29%), Gaps = 42/491 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + S
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKKYDVKS 183
Query: 180 STDGTE-----------------------------RYGLLDRNHKIKVEPQVLKDIDVSV 210
+ ++ ++ D
Sbjct: 184 EVATPTAKLDISGLDGAALKTGTGSTGDTGSIKDGKVYYDGTDYYAEITFTDTADQTAKG 243
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
+ + T+ + T A PV P+A T + + +
Sbjct: 244 GYYKVNVDDATGAVTMTASTTKETTTPTGITAVAQVQKPVAAPSAIQDQLTAASVANADK 303
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ + + G + A + T Y +T K
Sbjct: 304 AEMVKMSYTDKNGKTIDGGYAVKVGDDYYAATQKKDGSFTINTTSYTDKDGNTQTALNKL 363
Query: 331 LPKE----------IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
+ + + + A E + ID + A
Sbjct: 364 GGVDGKTEVVSIEGKTYTAAKAKDHNFKADPDLAEAATTTTENPLQKIDAALAQVDALRS 423
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+ N
Sbjct: 424 DLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQAN 483
Query: 441 NSTARILSLFR 451
+LSL R
Sbjct: 484 QVPQNVLSLLR 494
>gi|308054825|gb|ADO01459.1| flagellin [Salmonella enterica subsp. indica]
Length = 495
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 72/492 (14%), Positives = 140/492 (28%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLSVQDAYTPKG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDID-------------------------------- 207
+ + + + D
Sbjct: 184 TAVTNDVTTYKNGGTTLTAPNAAAIDTALGTTGAAGSAAVKFKDGNYFVEVTGTAKDGLY 243
Query: 208 --------VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
A+ + T + A A + A
Sbjct: 244 EATVDAAGAVTMTANKSTVTGASTVTENQIVDAVTPTPVDTVAAATALTNAGVTGATGNT 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + K+ V + +++GN K + T
Sbjct: 304 SLVKMSFEDKNGKVTDAGYALKVGNDYYAADYDEKTGEIKAKTVNYTDATGATKTGAVKF 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S V + + + E ++ ID + A
Sbjct: 364 GGANGKTEVVTTVDGNTYQASDVKGHNFQSGGALSEAVTTKTENPLAKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|38050077|gb|AAR10657.1| phase 1 flagellin [Salmonella enterica]
Length = 500
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 76/497 (15%), Positives = 137/497 (27%), Gaps = 48/497 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + S
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ L + S A ++ A
Sbjct: 184 EAVKSGGGATLSTTGLNDAALKTGVGGATSGTAAIKDNKVFFDATDNKYFIEVEGLTAGD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW----------- 288
G+ + V P TT G + + A + T +
Sbjct: 244 AAKNGVYEVSVADDGTVTMPATTKVAGGMPATAAAVTETQPKPVALSTEVKAQLTDSGIS 303
Query: 289 ----------------------------------VRATTKNSITSDPGYTNSTVAKVGNT 314
AT + T T
Sbjct: 304 AADAAKGQLVTMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSISINTTKYTDKDGNTK 363
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ S + + A E + ID +
Sbjct: 364 SALNQLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAATTTTENPLQKIDAALAQ 423
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 VDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTS 483
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 VLAQANQVPQNVLSLLR 500
>gi|302391047|ref|YP_003826867.1| flagellin domain protein [Acetohalobium arabaticum DSM 5501]
gi|302203124|gb|ADL11802.1| flagellin domain protein [Acetohalobium arabaticum DSM 5501]
Length = 478
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 72/475 (15%), Positives = 151/475 (31%), Gaps = 28/475 (5%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A +L+ N N+ +R+SSG R++ AAD+AA +I++ MK L+
Sbjct: 3 INTNVTALNAYNQLKSTNENMSKSLERLSSGKRINSAADDAAGLAISEKMKGQMNGLAQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+ + + ++ ++ D IQ EI QL+ ++
Sbjct: 63 QRNAQDSISMIQTAEGALQETHSILQRMRELSVQAGNDTNTADDRAEIQEEIDQLKDEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I + FN + L G T + ++V G+ + + + T +S
Sbjct: 123 NIGETTEFNTKKLLNGGAGLETTTNTETVDGTDKEWASVQGGSADTETGTIDITSATAAS 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + ++ + + + L
Sbjct: 183 AGSYDLTVSTGEGTNESITVNGNTVNYDASASSATVSANNLQTVLNDNADKLGIEEVEDA 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
T+ + A +A + + A + DI N+
Sbjct: 243 DVTSSGTMTIENAAIGSANELDISAGSTAVATSTAIDVSNEGTDIDITAGTNGGNATAIA 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE-------------------------I 335
S+ + T + D +
Sbjct: 303 DTDYVSSGNSIEVTGGKFEGLKLEFDGEEMSTTAGTNKFNVEIESNGVVQSQIGANDGQN 362
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
S + + E +S +D I+ ++ K+G+ +R+ +
Sbjct: 363 MSISINDMRSEALGVSNLDVTSAENANEAISTLDDAIQKVSSERSKLGAKQNRLEHITNN 422
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + R+ D DMASE ++S + Q L+ N + ++ L
Sbjct: 423 LSAAEENLTAANSRIRDVDMASEMMQMSKTRILSQAGTAMLAQANQKSQGVMQLL 477
>gi|38050081|gb|AAR10659.1| phase 1 flagellin [Salmonella enterica]
Length = 500
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 77/497 (15%), Positives = 141/497 (28%), Gaps = 48/497 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + S
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ L+ + + A ++ A
Sbjct: 184 EAVKSGGGATLNTAGLNDTALKAGVGGATNGTAAIKDGKVFFDATDNKYFIEVEGLTAGD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW----------- 288
G+ + V P TT T G + + A + T +
Sbjct: 244 ATKNGVYEVSVADDGTVTMPATTKVTGGMPATATAVTETQPKPVALSTAVKDQLTDSGIS 303
Query: 289 ----------------------------------VRATTKNSITSDPGYTNSTVAKVGNT 314
AT + T T
Sbjct: 304 AADAAKGQLVTMSYTDKNGKTIDGGFGVKVGANIYAATKNKDGSFSINTTEYTDKGGNTK 363
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ S + + A E ++ ID +
Sbjct: 364 TALNQLGGADGKTEVVSIDGKTYNASKAAGHNFKAQPELAEAAATTTENPLAKIDAALAQ 423
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 VDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTS 483
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 VLAQANQVPQNVLSLLR 500
>gi|38050063|gb|AAR10650.1| phase 1 flagellin [Salmonella enterica]
gi|38050065|gb|AAR10651.1| phase 1 flagellin [Salmonella enterica]
gi|38050267|gb|AAR10752.1| phase 1 flagellin [Salmonella enterica]
gi|38050269|gb|AAR10753.1| phase 1 flagellin [Salmonella enterica]
gi|38050271|gb|AAR10754.1| phase 1 flagellin [Salmonella enterica]
gi|308054779|gb|ADO01436.1| flagellin [Salmonella enterica subsp. diarizonae]
Length = 494
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 72/491 (14%), Positives = 136/491 (27%), Gaps = 42/491 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDALNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA----- 234
+ IK + T + + + +
Sbjct: 184 KPTSMKLDTSGITAEAIKNGVTGATTDGALKDGKIYSDGTNYYVEVSFAATADTSKGGFL 243
Query: 235 ----------------------------------ANATFDQAKGIATIPVPLPAAPAAPN 260
+ A A N
Sbjct: 244 KVDVDSSNGKVSIPTTAASAVAAKPAGVKEVSEVQGKIAASTDVKNQLTAGGIDAGVAAN 303
Query: 261 TTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDT 320
+ + + + AT K + T+ T +
Sbjct: 304 AEMVKMSYTDKNGKTIDGGYAVKVGNDYYAATQKKDGSFSVNTTSYTADDGTSKTALNQL 363
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
+ S + + A E + ID +
Sbjct: 364 GGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAATTTTENPLQKIDAALAQVDTLRS 423
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+ N
Sbjct: 424 DLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQAN 483
Query: 441 NSTARILSLFR 451
+LSL R
Sbjct: 484 QVPQNVLSLLR 494
>gi|50830912|gb|AAT81621.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Senftenberg]
Length = 505
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 72/502 (14%), Positives = 145/502 (28%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTD----------------------------------LGSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDDAAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
T T + K ++ K + + +TT
Sbjct: 244 AVNLFKTTKSTAGTDEAKAIASAIKGGKEGDTFDYKGVSFTIDTKAGDDGNGTVSTTING 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL 325
+A + ++ + S+ + + ++ +
Sbjct: 304 EKVTLTVADITAGAANVNDATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 326 DSRKDLPKEIDSGYSMVTLNITRHANTDAYN----------------EKLAMEEMVSFID 369
K + + +T T + K + ++ ID
Sbjct: 364 GESKITVNGAEYTANAAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSDITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 484 QAGTSVLAQANQVPQNVLSLLR 505
>gi|38049688|gb|AAR10473.1| flagellin [Salmonella bongori]
Length = 494
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 76/491 (15%), Positives = 146/491 (29%), Gaps = 42/491 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + S
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKKYDVKS 183
Query: 180 STDGTE-----------------------------RYGLLDRNHKIKVEPQVLKDIDVSV 210
+ ++ ++ D
Sbjct: 184 EVATPTAKLDISGLDGAALKTGTGSTGDTGSIKDGKVYYDGTDYYAEITFTDTADQTAKG 243
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
+ + T+ + T A PV P+A T + + +
Sbjct: 244 GYYKVNVDDATGAVTMTASTTKETTTPTGITAVAQVQKPVAAPSAIQDQLTAASVANADK 303
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ + + G + A + T Y +T K
Sbjct: 304 AEMVKMSYTDKNGKTIDGGYAVKVGDDYYAATQKKDGSFTINTTSYTDKDGNTQTALNKL 363
Query: 331 LPKE----------IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
+ + + + A E + ID + A
Sbjct: 364 GGVDGKTEVVSIEGKTYTAAKAKDHDFKAQPELAEAATATTENPLQKIDAALAQVDALRS 423
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+ N
Sbjct: 424 DLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQAN 483
Query: 441 NSTARILSLFR 451
+LSL R
Sbjct: 484 QVPQNVLSLLR 494
>gi|291524058|emb|CBK89645.1| Flagellin and related hook-associated proteins [Eubacterium rectale
DSM 17629]
Length = 476
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 65/475 (13%), Positives = 141/475 (29%), Gaps = 26/475 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N A +A++ L +++SSG R++ AAD+AA +I++ M+ L
Sbjct: 2 VVQHNMQAANANRMLNVTTGQQAKSTEKLSSGYRINRAADDAAGLTISEKMRKQIKGLDR 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S V A+ +++ ++ + T TD K+IQ EI QL +++
Sbjct: 62 ASTNAEDGVSAVQTAEGALTEVHSMLQRMNELATQSANGTNSNTDRKAIQDEIDQLTTEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FN L+ D ++ G K + +
Sbjct: 122 DRVSETTKFNETYLLKGDGSEKAHNVNAHDAGLDGVTLTDKGNTVDVTLKTLNAGDKISI 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ +V + + T + +
Sbjct: 182 AGKNYTIGSKAADIAAKIEAGTDTAKKSYTVNGTTYQVGTTNVFDSAGNKIKKSDLTGNA 241
Query: 240 DQAKGI--------------------ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ A + ++ T
Sbjct: 242 GDTGDAVLKDLQDLVKDGSTVTIGTKTYTAMTDKDGGADGIDDNDSTVITDGKAYQLQTA 301
Query: 280 IRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGY 339
+ S I N+ ++ Y +T N + + + ++ +
Sbjct: 302 EIVKASSIGADTAATNATNANDAYDTATTTFTLNKGNVSYKDGLSFNLHVGADADMTNKI 361
Query: 340 SMVTLNITRHA---NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
++ ++ + + + I I ++ +G++ +R+ + +
Sbjct: 362 AVNIDSMNSAGLGIKGIKADTEQDATYAIDAIADAISTVSSQRSALGAVQNRLEHTINNL 421
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R+ D DMA E S Q L+ N S +LSL +
Sbjct: 422 DNVVENTTSAESRIRDTDMAEEMVNYSKNNILAQAGQSMLAQANQSNQGVLSLLQ 476
>gi|1333821|emb|CAA27129.1| phase-1-c flagellin [Salmonella enterica]
Length = 493
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 71/486 (14%), Positives = 133/486 (27%), Gaps = 37/486 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 8 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 67
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 68 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 127
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG---------------------------- 151
++ + FNG L D + A
Sbjct: 128 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVSD 187
Query: 152 ------SFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
N V T + + +
Sbjct: 188 TAVAASYSDSKQNIAVPDKTAITAKIGAATSGGAGIKADISFKDGKYYATVSGYDDAADT 247
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
Y+ + T AT +A + A A T
Sbjct: 248 DKNGTYEVTVAADTGAVTFATRPTVVDLPTDAKAVSKVQQNDTEIAATNAKADTATLVKM 307
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL 325
S + + + + + + K+ S +
Sbjct: 308 SYTDNNGKVIDGGFAFKTSGGYYAASVDKSGARSLKVTSYVDATTGTEKTAANKLGGADG 367
Query: 326 DSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
+ S + + A E + ID + A +G++
Sbjct: 368 KTEVVTIDGKTYNASKAAGHNFKAQPELAERAATTTENPLQKIDAALAQVDALRSDLGAV 427
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445
+R + + + + R+ D+D A+E + +S Q QQ L+ N
Sbjct: 428 QNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQN 487
Query: 446 ILSLFR 451
+LSL R
Sbjct: 488 VLSLLR 493
>gi|56460244|ref|YP_155525.1| flagellin [Idiomarina loihiensis L2TR]
gi|56179254|gb|AAV81976.1| Flagellin [Idiomarina loihiensis L2TR]
Length = 471
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 77/466 (16%), Positives = 154/466 (33%), Gaps = 19/466 (4%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN S+++A ++L +L+ R+SSG R++ AAD+AA I+ + S L+
Sbjct: 5 VNTNVSSLNAQRQLISSGNSLDQAFQRLSSGFRINSAADDAAGLQISNRLSSQVNGLNQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S A+ + ++ ++ ++ D ++Q EI LQ +L
Sbjct: 65 NRNANDAISMAQTAEGALDESTTILQRMRTLSIQSANGSNSDVDRGALQKEIGNLQQELT 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SF G+N L G+ + + + + + L +
Sbjct: 125 RIAETTSFGGKNLLDGSFGTEKYQVGANANETISVSLRDVASNAIGNNKVTGAGTTLGTQ 184
Query: 181 TDG-TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T + + I + + K A T A
Sbjct: 185 TAAAQADFTVGLTAGDITLGGPDGNAVIGVTATDKAMDIVSKVNGAGTGVTASTEVEAKI 244
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + +G+ S + + + N ++ + A N +
Sbjct: 245 TNFQSTDVGTLSIGDESFDLAKYNGSLTKLSEDLGKAGIDATVDNGELTINAEDVNGVQI 304
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLD---------------SRKDLPKEIDSGYSMVTL 344
G +TV G T V + T S + ++ +
Sbjct: 305 TGGVAGNTVTLAGATGAGVAVDGTNTSVVVDAELQLESRDAFSITNDGTADEAEIFGASA 364
Query: 345 NITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVE 404
+ + ++ + ID I A +G++ +R + + +E
Sbjct: 365 STLSQVGQIDISTYDGSQDALGTIDAAIAQIDAQRADLGAVQNRFQSTIRNQSNIAENLE 424
Query: 405 KGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R+ DAD A+E+ +L+ Q QQ + L+ N L L
Sbjct: 425 GAKSRIKDADFAAETAKLTQAQILQQASQTILAQANQRPQAALQLL 470
>gi|50830950|gb|AAT81640.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Heidelberg]
Length = 495
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 68/492 (13%), Positives = 131/492 (26%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + + G + + +
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + + A T +T
Sbjct: 244 GYYEVSVDKTNGKVTLAGGTTSPLTGGLPATATEDVKNVQVANADLTEAKAALTAAGVTG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN--- 356
+ D + D S+ T T T
Sbjct: 304 TASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNK 363
Query: 357 -------------------------------------EKLAMEEMVSFIDTQIKCATAAA 379
E + ID +
Sbjct: 364 LGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|50830920|gb|AAT81625.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|50830924|gb|AAT81627.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
Length = 495
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 68/492 (13%), Positives = 131/492 (26%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + + G + + +
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + + A T +T
Sbjct: 244 GYYEVSVDKTNGKVTLAGGATSPLTGGLPATATEDVKNVQVANADLTEAKAALTAAGVTG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY---- 355
+ D + D S+ T T T
Sbjct: 304 TASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNK 363
Query: 356 ------------------------------------NEKLAMEEMVSFIDTQIKCATAAA 379
E + ID +
Sbjct: 364 LGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|38050127|gb|AAR10682.1| phase 1 flagellin [Salmonella enterica]
Length = 499
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 74/496 (14%), Positives = 131/496 (26%), Gaps = 47/496 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ V S G + A T
Sbjct: 184 KAVTGVSTLDTAGLTGAAIKTGVDGATTTSGSIKDGKVYFDDATKNYYVEVEFSDAADTA 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A T + V + + S A T + +
Sbjct: 244 KNGYYKVNVADDGTVTMGASTTKEAAKPAGVVEVTKTQEEKAIKASVDVKAALTAGGVDT 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE-- 357
T V + D T
Sbjct: 304 ADAATAEMVKMSYTDKNGKTIDGGYAVKVGDNYYAATQKKDGSFSVNTTSYIATDGTTKT 363
Query: 358 ------------------------------------------KLAMEEMVSFIDTQIKCA 375
E + ID +
Sbjct: 364 ALNQLGGADGKTEVVTIDGKTYNASKAAGHDFKAQPELAEVATKTTENPLQKIDAALAQV 423
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 DTLRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSV 483
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 LAQANQVPQNVLSLLR 499
>gi|16765297|ref|NP_460912.1| flagellin [Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|167993530|ref|ZP_02574624.1| flagellin [Salmonella enterica subsp. enterica serovar 4,[5],12:i:-
str. CVM23701]
gi|168234129|ref|ZP_02659187.1| flagellin [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|194472236|ref|ZP_03078220.1| flagellin [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|20141325|sp|P06179|FLIC_SALTY RecName: Full=Flagellin; AltName: Full=Phase 1-I flagellin
gi|217063|dbj|BAA02846.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|16420494|gb|AAL20871.1| flagellar biosynthesis; flagellin [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|38050023|gb|AAR10630.1| phase 1 flagellin [Salmonella enterica]
gi|38050027|gb|AAR10632.1| phase 1 flagellin [Salmonella enterica]
gi|38050031|gb|AAR10634.1| phase 1 flagellin [Salmonella enterica]
gi|38050033|gb|AAR10635.1| phase 1 flagellin [Salmonella enterica]
gi|38050035|gb|AAR10636.1| phase 1 flagellin [Salmonella enterica]
gi|38050039|gb|AAR10638.1| phase 1 flagellin [Salmonella enterica]
gi|38050041|gb|AAR10639.1| phase 1 flagellin [Salmonella enterica]
gi|38050043|gb|AAR10640.1| phase 1 flagellin [Salmonella enterica]
gi|38050045|gb|AAR10641.1| phase 1 flagellin [Salmonella enterica]
gi|38050047|gb|AAR10642.1| phase 1 flagellin [Salmonella enterica]
gi|50830922|gb|AAT81626.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|50830926|gb|AAT81628.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|148644999|gb|ABR01031.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|194458600|gb|EDX47439.1| flagellin [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|205328376|gb|EDZ15140.1| flagellin [Salmonella enterica subsp. enterica serovar 4,[5],12:i:-
str. CVM23701]
gi|205331844|gb|EDZ18608.1| flagellin [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|261247125|emb|CBG24948.1| flagellin [Salmonella enterica subsp. enterica serovar Typhimurium
str. D23580]
gi|267993946|gb|ACY88831.1| flagellin [Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|301158473|emb|CBW17983.1| flagellin [Salmonella enterica subsp. enterica serovar Typhimurium
str. SL1344]
gi|312912949|dbj|BAJ36923.1| flagellin [Salmonella enterica subsp. enterica serovar Typhimurium
str. T000240]
gi|321224602|gb|EFX49665.1| Flagellar biosynthesis protein FliC [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323130237|gb|ADX17667.1| flagellin [Salmonella enterica subsp. enterica serovar Typhimurium
str. 4/74]
gi|332988848|gb|AEF07831.1| flagellin [Salmonella enterica subsp. enterica serovar Typhimurium
str. UK-1]
Length = 495
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 68/492 (13%), Positives = 131/492 (26%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + + G + + +
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + + A T +T
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVKNVQVANADLTEAKAALTAAGVTG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY---- 355
+ D + D S+ T T T
Sbjct: 304 TASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNK 363
Query: 356 ------------------------------------NEKLAMEEMVSFIDTQIKCATAAA 379
E + ID +
Sbjct: 364 LGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|38050091|gb|AAR10664.1| phase 1 flagellin [Salmonella enterica]
Length = 501
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 79/498 (15%), Positives = 138/498 (27%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGS-----------------FIRDDNGKVQ 162
++ + FNG L D + A ++
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
+ G + +V D + Y T
Sbjct: 184 EAVKSGGGATLSTTGLDDAALKAGVGGATSGTAAIKDGKVFFDATDNKYFIEVEGLTAGD 243
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
A + T A + +PA A T + S +V T +
Sbjct: 244 ATKNGVYEVNVADDGTVTMPATAAKVTGGIPATATAVTETQPKPVALSTAVKDQLTDSGI 303
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
+D S T G T V S E
Sbjct: 304 SAADAAKGQLVTMSYTDKNGKTIDGGFGVKVGANIYAATKNKDGSFSINTTEYTDKGGNT 363
Query: 343 TLNITRHANTDAYN-----------------------------EKLAMEEMVSFIDTQIK 373
+ + D E + ID +
Sbjct: 364 KTALNQLGGADGKTEVVSIDGKTYNASKAAGHNFKAQPELAEAAATTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|308054687|gb|ADO01390.1| flagellin [Salmonella enterica subsp. enterica]
Length = 495
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 73/492 (14%), Positives = 138/492 (28%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI---------------- 163
++ + FNG L D + A I Q
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 164 ------------------------TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+T D + + +ST + + +
Sbjct: 184 EAVTPSATLSTTALNGAGLKTGTGSTTDTGSIKDGKVYYNSTSKNYYVEVEFTDATDQTN 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++V+ A + + T +G A + A
Sbjct: 244 KGGFYKVNVADDGAVTMTAATTKETTTPTGITEVTQVQKPVAAPAAIQAQLTAAHVTGAD 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + AT + T T
Sbjct: 304 TAEMVKMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTEYTDKDGNTKTALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E + ID + A
Sbjct: 364 LGGADGKTEVVSIDGKTYNASKAAGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|148644993|gb|ABR01028.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Kentucky]
Length = 495
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 68/492 (13%), Positives = 131/492 (26%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + + G + + +
Sbjct: 184 TAATVTGYADTAIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + + A T +T
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVKNVQVANADLTEAKAALTAAGVTG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY---- 355
+ D + D S+ T T T
Sbjct: 304 TASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNK 363
Query: 356 ------------------------------------NEKLAMEEMVSFIDTQIKCATAAA 379
E + ID +
Sbjct: 364 LGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|154710444|gb|ABS84286.1| FlkA [Escherichia coli]
Length = 502
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 75/499 (15%), Positives = 134/499 (26%), Gaps = 50/499 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +S+ + + I+ SIQ EITQ ++
Sbjct: 64 ASRNANDGISVAQTTEGSLSEINNNLQRIRELSVQATNGSNSDSDLSSIQDEITQRLQEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR-DDNGKVQITTIDYYLDPETVLLD 178
++ + FNG L + A I + + + D
Sbjct: 124 DRVSNQTQFNGVKVLASQQTMKIQVGANDGETITIDLKEINSKTLGLDKLDVRNTFSTSD 183
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ T + K +Y + T+ T
Sbjct: 184 LAATATTELAPAKTDVKNLTFTDGATAPTFKLYVDNTDPDKLFVSSNGTNYYAASYDKDT 243
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
A + T V A+ + ++ + +
Sbjct: 244 NSIKFNSTGTGTTGTAGTDFIDATGKDVHVGGGRVMAANDIKGRTDDNVAAKPQLFLDQS 303
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN-- 356
+ A N T T DS I + A +
Sbjct: 304 GKYHISKDNGATYANATVNATTGEVTYDSGTAAALGAGIEVGSALKEIAKPDAGVAVDLT 363
Query: 357 --------------------------------------------EKLAMEEMVSFIDTQI 372
+ + ID +
Sbjct: 364 GVSGVTGAQLFAKKDGSGYVIKGTADNKEVLFEAKVAADGKVTKGDQLTADPLKSIDDAL 423
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+G++ +R + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 SQVDQFRSSLGAVQNRFDSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAG 483
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N +T +LSL R
Sbjct: 484 TSVLAQANQTTQNVLSLLR 502
>gi|169831927|ref|YP_001717909.1| flagellin domain-containing protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169638771|gb|ACA60277.1| flagellin domain protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 420
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 63/453 (13%), Positives = 128/453 (28%), Gaps = 37/453 (8%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M + TN +A++ + L +++SSG R++ AAD+AA +I++ M+ L
Sbjct: 1 MMRVQTNIAALNTHRNLGVNQMMAGRALEKLSSGFRINRAADDAAGLAISEQMRGQIRGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQS 117
G S V A+ + + ++ ++ +D IQ E+ QL S
Sbjct: 61 GQAVRNAQDGISMVQTAEGALQEIHTILQRMRELAVQAANDTLAASDRAQIQGEVDQLVS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ I+ + FN L L
Sbjct: 121 EVNRISNNTEFNARILLDGSLS----------------------------------AATT 146
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+T + VL + + + G + K +
Sbjct: 147 LQATRLEGPVLWRAAVGGLATGATVLTALHDTAGNPLGIATGDVITFEAVVNGVHKTGSF 206
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
T A + A T T + + + +R
Sbjct: 207 TVPAAASGMELQDLTARMNATGWITGATVSAGKITFQGQNQGEVHHIAGFTMRVVDSAGN 266
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + ++ + T T +
Sbjct: 267 EKTTASRYLNQFVITQVAQNASADDAARLMVGANEGQLMTVSIAKTNATTLAIQGIRVDT 326
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ V ID + + ++G++ +R+ + + + R+ DADMA+
Sbjct: 327 QPQANIAVKVIDEALGTVSTNRARLGAVQNRLEHTIANLGATAENLTAAESRIRDADMAA 386
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
E + Q ++ L+ N +L L
Sbjct: 387 EMMEFTKFNILSQASIAMLAQANLQPQAVLQLL 419
>gi|38049874|gb|AAR10556.1| phase 2 flagellin [Salmonella enterica]
Length = 495
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 75/492 (15%), Positives = 142/492 (28%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEXNNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVDS 183
Query: 180 ----------------------------------------STDGTERYGLLDRNHKIKVE 199
++ Y +D
Sbjct: 184 KAVTPPAKLDIAGLTGTAIKTGVDSATVDTGSIKDGKVYYNSTSKNYYVEVDFGTSADAA 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++V+ ++ + T +G A + A
Sbjct: 244 KSGYYKVNVADDGTVSMTASTTKEATTPTGITEVTQVQKPVAAPAAIQAQLTAAHVTGAD 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + D + AT K + T+ T A +
Sbjct: 304 TAEMVKMSYTDKNGKTIDGGYAVKVGDDYYAATQKKDGSFSINTTSYTAADGTSKTALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E + ID +
Sbjct: 364 LGGADGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|315306482|gb|ADU03995.1| flagellin H:d [Salmonella enterica subsp. enterica]
gi|315306486|gb|ADU03997.1| flagellin H:d [Salmonella enterica subsp. enterica]
Length = 506
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 74/503 (14%), Positives = 135/503 (26%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR--------------DDNGKVQITT 165
++ + FNG L D + A I +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKEISSKTLGLDKLNVQDAYTPKE 183
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+D T + T + + DI +
Sbjct: 184 TAVIVDRTTYKDGTDTISAQSNADIQTAIGGGATGVTGADIKFKDGQYYLDVKGGAAAGI 243
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT-------------------- 265
+ + D A T
Sbjct: 244 YKATYDETTKKVSIDTTDTTPLTGTAAADIQATTAITKNQVAEVTKGNADTTTVAAQLAA 303
Query: 266 -----------------SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
K+ V ++MG+ K + T +
Sbjct: 304 AGVTGADKDNTSLVKLSFEDKNGKVIDGGYAVKMGDDFYAATYDEKTGTITAKTTTYTDG 363
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
V T + S + + R E + I
Sbjct: 364 TGVAQTGAVKFGGANGKSEVVTATDGKTYLASDLDKHNFRTGGELKEVNTDKTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|119898983|ref|YP_934196.1| flagellin [Azoarcus sp. BH72]
gi|119671396|emb|CAL95309.1| flagellin [Azoarcus sp. BH72]
Length = 493
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 75/490 (15%), Positives = 149/490 (30%), Gaps = 40/490 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++++ ++L +L R+SSGLR++ A D+AA +I++ M S
Sbjct: 4 VINTNVASLNTQRQLNASQGSLATSLQRLSSGLRINSAKDDAAGLAISERMTSQIRGQDQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ + A DV+ I+ +D +++ +E+ QL ++L
Sbjct: 64 ARRNANDGISLAQTAEGALQSAGDVLQRIRELAVQSSNATNSASDRQALNAEVNQLTAEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA+ + FNG L ++T + + + Y +
Sbjct: 124 DRIAKTTEFNGRKLLDGSFTTATFQVGANAGQTIQATTANFSTSQYGGYRIGSLAATTPG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ V++ ASGT + A+ A +
Sbjct: 184 DKGDLTPGSTAFALGSSAAATNRVVGGTVTINGASGTSTAVIPAGASAKAAAALINAESG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + S + + + I + D A + S
Sbjct: 244 TTGVTATAKTEFDIDFSAPNTSYKFDLSSDNSTAITVSFTIGAEDVDGLAAAVNAFNDVS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP--------------------------- 332
+ V G+ ++ +
Sbjct: 304 SKTGVTARVNDAGDGITLLNAFGENISLTNAASGSSAATIGGTATAAGATAIGTGQLVLD 363
Query: 333 ----------KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKI 382
D ++ + + A + ++ D + K
Sbjct: 364 SDKSFSIDAPNATDFFNNVSASAQLQRVADLDVSSVDAAQRTLAIADAALSAINGQRAKF 423
Query: 383 GSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNS 442
G++ SR +++ + + R+ D D A+E+ L+ Q QQ L+ N
Sbjct: 424 GALQSRFETTISNLQISSENLSASRSRIRDTDFAAETANLTRSQILQQAGTAMLAQANAL 483
Query: 443 TARILSLFRG 452
++LSL +G
Sbjct: 484 PQQVLSLLQG 493
>gi|308054733|gb|ADO01413.1| flagellin [Salmonella enterica subsp. salamae]
Length = 495
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 71/492 (14%), Positives = 136/492 (27%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI---------------- 163
++ + FNG L D + A I Q
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 164 ------------------------TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+T + + + +ST + + +
Sbjct: 184 EAVTPSATLSTTALDGAGLKTGTGSTTNTGSIKDGKVYYNSTSKNYYVEVEFTDATDQTN 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++V+ A + + T + A + A
Sbjct: 244 KGGFYKVNVADDGAVTMTAATTKEATTPTDITEVTQVQKPVAAPAAIQAQLTAAHVTGAD 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + AT + T T
Sbjct: 304 TAEMVKMSYTDKNGKTIDGGFGVKVGADIYAATKNKDGSFSINTTEYTDKDGNTKTALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E + ID + A
Sbjct: 364 LGGADGKTEVVSIDGKTYNASKAAGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDALR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|315306484|gb|ADU03996.1| flagellin H:d [Salmonella enterica subsp. enterica]
Length = 506
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 75/503 (14%), Positives = 136/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR--------------DDNGKVQITT 165
++ + FNG L D + A I +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKEISSKTLGLDKLNVQDAYTPKE 183
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+D T + T + + DI +
Sbjct: 184 TAVIVDRTTYKDGTDTISAQSNADIQTAIGGGATGVTGADIKFKDGQYYLDVKGGAAAGI 243
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT-------------------- 265
+ + D A T
Sbjct: 244 YKATYDETTKKVSIDTTDTTPLTGTAAADIQATTAITKNQVAEVTKGNADTTTVAAQLAA 303
Query: 266 -----------------SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
K+ V ++MG+ K + T +
Sbjct: 304 AGVTGADKDNTSLVKLSFEDKNGKVIDGGYAVKMGDDFYAATYDEKTGTITAKTTTYTDG 363
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
A V T + S + + R E + I
Sbjct: 364 AGVAQTGAVKFGGANGKSEVVTATDGKTYLASDLDKHNFRTGGELKEVNTDKTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|38050029|gb|AAR10633.1| phase 1 flagellin [Salmonella enterica]
Length = 495
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 68/492 (13%), Positives = 131/492 (26%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + + G + + +
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + + A T +T
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVKNVQVANADLTEAKAALTAAGVTG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY---- 355
+ D + D S+ T T T
Sbjct: 304 TASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNK 363
Query: 356 ------------------------------------NEKLAMEEMVSFIDTQIKCATAAA 379
E + ID +
Sbjct: 364 LGGADGKTEVVSIDGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|38049852|gb|AAR10545.1| phase 2 flagellin [Salmonella enterica]
gi|38049854|gb|AAR10546.1| phase 2 flagellin [Salmonella enterica]
Length = 501
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 79/498 (15%), Positives = 139/498 (27%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGS-----------------FIRDDNGKVQ 162
++ + FNG L D + A ++
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
+ G + +V D + Y T
Sbjct: 184 EAVKSGGGTTLSTTGLDDAALKAGVGGATSGTAAIKDGKVFFDATDNKYFIEVEGLTAGD 243
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
A + T A + +PA A T + S +V T +
Sbjct: 244 ATKNGVYEVNVADDGTVTMPATAAKVTGGIPATATAVTETQPKPVALSTAVKDQLTDSGI 303
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
+D S T G T V S E
Sbjct: 304 SAADAAKGQLVTMSYTDKNGKTIDGGFGVKVGANIYAATKNKDGSFSINTTEYTDKGGNT 363
Query: 343 TLNITRHANTDAYN-----------------------------EKLAMEEMVSFIDTQIK 373
+ + D E ++ ID +
Sbjct: 364 KTALNQLGGADGKTEVVSIDGKTYNASKAAGHNFKAQPELAEAAATTTENPLAKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|190574253|ref|YP_001972098.1| flagellin [Stenotrophomonas maltophilia K279a]
gi|190012175|emb|CAQ45798.1| putative flagellin [Stenotrophomonas maltophilia K279a]
Length = 406
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 65/452 (14%), Positives = 134/452 (29%), Gaps = 52/452 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L +L R+SSG R++ A D+AA +I++ +
Sbjct: 4 VINTNTMSLNAQRNLSTSGSSLATTIQRLSSGSRINSAKDDAAGLAISERFGTQIRGTDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S +A+ +++ + + ++ +D K++Q+E+TQL S++
Sbjct: 64 AIRNANDGISLAQVAEGSLTEIGNNLQRVRELSVQASNATNSASDRKALQAEVTQLVSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A+ S FNG L S +
Sbjct: 124 DRVAKQSDFNGTKLLDGSFSSQLFQVGA-------------------------------- 151
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ D + + + T +
Sbjct: 152 -----------------NAGQAIAIDKTIDAKANALGGAMFDSVSFTIAAPADATTGVKM 194
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A G G+K+ A A + +
Sbjct: 195 TGMTITNGAGSAISIADIDVAAQGGADGTKTQDAATKAMVAAINAKIGETGVLAEVDAAG 254
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
S+V + + + + + + T A+ +
Sbjct: 255 GGKINLSSVKDSVDKNGAFLGIAVETGTWTGIATGPGDITASTTAVAKSFADKIDVSTVK 314
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ + +D + + +G+I +R ++ + + R+ D D A E+
Sbjct: 315 GAQQAMEVVDKALGAINSTRADLGAIQNRFTSVVANLQTSSENLSASRSRIKDTDFAKET 374
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ L+ N +LSL R
Sbjct: 375 AELTRTQILQQAGTAMLAQANQVPQGVLSLLR 406
>gi|38049684|gb|AAR10471.1| flagellin [Salmonella bongori]
Length = 501
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 72/498 (14%), Positives = 137/498 (27%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI------------------------- 154
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 155 ------RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + L K L D
Sbjct: 184 EAVTAGTFSVDSGVAIKSATVDVKTALSTTGNDGTVSKIELDKATGKYYATVSGLTDSAD 243
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + + ++ T A + + + T A +
Sbjct: 244 TSKNGTYEVNVSSTGDITFVDTTKDTVTAGSVEVQNVHTKAAGALPDLADAKAALTKANV 303
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ A+ + + Y S G V + +
Sbjct: 304 ANADTASLVKMSYTDKNGKVIDGGYALKTDDTKYYVASYNETTGKVEAAVTKYTDSNGFS 363
Query: 329 KDLPK---------------EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
K + + + A E + ID +
Sbjct: 364 KTAANQLGGVDRKTEVVEIGGKTYTAAKAKDHNFKADPDLAVVAAATTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|38049848|gb|AAR10543.1| phase 2 flagellin [Salmonella enterica]
Length = 500
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 76/497 (15%), Positives = 139/497 (27%), Gaps = 48/497 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + S
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVKS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ L+ + + A ++ A
Sbjct: 184 EAVKSGGGATLNTAGLNDTALKAGVGGATNGTAAIKDGKVFFDATDNKYFIEVEGLTAGD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW----------- 288
G+ + V P TT G + + A + T +
Sbjct: 244 ATKNGVYEVSVADDGTVTMPATTKVAGGMPATATAVTETQPKPVALSTAVKDQLTDSGIS 303
Query: 289 ----------------------------------VRATTKNSITSDPGYTNSTVAKVGNT 314
AT + T T
Sbjct: 304 AADAAKGQLVTMSYTDKNGKTIDGGFGVKVGANIYAATKNKDGSFSINTTEYTDKGGNTK 363
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ S + + A E + ID +
Sbjct: 364 TALNQLGGADGKTEVVTIDGKTYNASKAAGHNFKAQPELAEAAATTTENPLQKIDAALAQ 423
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 VDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTS 483
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 VLAQANQVPQNVLSLLR 500
>gi|116696296|ref|YP_841872.1| flagellin [Ralstonia eutropha H16]
gi|113530795|emb|CAJ97142.1| Flagellin [Ralstonia eutropha H16]
Length = 435
Score = 214 bits (543), Expect = 3e-53, Method: Composition-based stats.
Identities = 73/452 (16%), Positives = 133/452 (29%), Gaps = 23/452 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + +L R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLMTQNNMNTSQSSLNTAIQRLSSGLRINSAKDDAAGQAIANRFTSNIRGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S + +++ + + I+ +D KSIQ EI Q S++
Sbjct: 64 AQRNANDGISLAQTTEGALTEVNNNLQRIRELSVQAATGSNSSSDLKSIQDEINQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L S A I+ +D T+ L
Sbjct: 124 DRTSQQTDFNGVKVLAGSNKLSVQVGAN-----------DGETISIDLKQIDRTTLGLSG 172
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + I I+ K + L
Sbjct: 173 FSVAKNSLDVGPKITTINAAAGTGSFNVSFAAGDVTKINAATGKTFAAADLELHEVKTAA 232
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + A+ + +G VA T + + + +
Sbjct: 233 GANSGQFVVKAGDDYFAASVDRATGAVKLNEADVAFDDTANGIAGPVTLQDQVVRVANDA 292
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T + N ++ S +
Sbjct: 293 AGVATGYVTVQGKNYVAAGTLADGGAAGTLNVAVGTISLSGATPTAEF---------TGV 343
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ID +K +G++ +R + + R+ DAD A+E
Sbjct: 344 PTGNALKKIDAALKQVDDLRSSLGAVQNRFDSVISNLGTTVTNLSSSRSRIQDADYATEV 403
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ QQ L+ N +T +LSL R
Sbjct: 404 SNMTRANILQQAGTSVLAQANQTTQGVLSLLR 435
>gi|218548540|ref|YP_002382331.1| Flagellin [Escherichia fergusonii ATCC 35469]
gi|218356081|emb|CAQ88698.1| Flagellin (Phase-1-C flagellin) [Escherichia fergusonii ATCC 35469]
Length = 510
Score = 214 bits (543), Expect = 3e-53, Method: Composition-based stats.
Identities = 80/499 (16%), Positives = 147/499 (29%), Gaps = 50/499 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 12 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 71
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
S G S + +++ + + ++ D KSIQ EI Q ++
Sbjct: 72 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSGSDLKSIQDEIQQRLEEI 131
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR------------------------ 155
++ + FNG L D A I
Sbjct: 132 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLKKIDVKSLGLDGFNINGPKQATA 191
Query: 156 ---DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYD 212
+ K Y + +D ++ D+ + Q+ + +
Sbjct: 192 GDLKSSFKNVTGFDTYNVGGNEYRVDINSGEVTGNNGADKTYVSSKNGQLTDKNEEANGK 251
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ + A N + A + ++
Sbjct: 252 TFFSKTASGTGDANAQAIGTAIKNGNEGDTFDYNGQTFTIDTKTGADGNGTASTMINGEK 311
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN------------------- 313
V + G + K+ TS + A N
Sbjct: 312 VTLTIKGAAGGALTAATVESDKDVYTSVTNGQYTFDATTKNDAAKLSDLEANNATKGTST 371
Query: 314 -THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
T + + S+ I+ N D + K + ++ ID +
Sbjct: 372 ITVNGANYTANADGSKITDKDGKVMYMDKTPSGISTLINEDVADSKKSTSSPLAAIDAAL 431
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A +G+I +R + + + R+ DAD A+E + +S Q QQ
Sbjct: 432 SKVDAVRSSLGAIQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAG 491
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N +T +LSL R
Sbjct: 492 TSVLAQANQTTQNVLSLLR 510
>gi|34810684|pdb|1UCU|A Chain A, R-Type Straight Flagellar Filament Made Of Full-Length
Flagellin
Length = 494
Score = 214 bits (543), Expect = 3e-53, Method: Composition-based stats.
Identities = 68/492 (13%), Positives = 131/492 (26%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 123 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + + G + + +
Sbjct: 183 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + + A T +T
Sbjct: 243 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVKNVQVANADLTEAKAALTAAGVTG 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY---- 355
+ D + D S+ T T T
Sbjct: 303 TASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNK 362
Query: 356 ------------------------------------NEKLAMEEMVSFIDTQIKCATAAA 379
E + ID +
Sbjct: 363 LGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLR 422
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 423 SDLGAVQNRFNSAITNLGNTVNNLTSVRSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 482
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 483 NQVPQNVLSLLR 494
>gi|38050113|gb|AAR10675.1| phase 1 flagellin [Salmonella enterica]
Length = 491
Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats.
Identities = 72/488 (14%), Positives = 135/488 (27%), Gaps = 39/488 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAK----------SVIGSFIRDDNGKVQITTIDYY 169
++ + FNG L D + A + + D VQ
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 170 LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT--- 226
S ++ + P + D+
Sbjct: 184 TAATVTGYTDSATAIDKSTFAASATTLGGTPAITGDLKFDDTTGKYYADVSGTTAKDGVY 243
Query: 227 -----------------------TSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTS 263
K T + + L AA +
Sbjct: 244 EVTVAADGKVTLTGTPTGPITAGFPSTATKDVKQTQQENADLTEAKAALTAAGVTGTASV 303
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
+ + + D + AT + T T +
Sbjct: 304 VKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTAEDGTSKTALNKLGGA 363
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+ S + + A E + ID + +G
Sbjct: 364 DGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLG 423
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
++ +R + + + + R+ D+D A+E + +S Q QQ L+ N
Sbjct: 424 AVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVP 483
Query: 444 ARILSLFR 451
+LSL R
Sbjct: 484 QNVLSLLR 491
>gi|146281784|ref|YP_001171937.1| flagellin type B [Pseudomonas stutzeri A1501]
gi|145569989|gb|ABP79095.1| flagellin type B [Pseudomonas stutzeri A1501]
Length = 482
Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats.
Identities = 67/480 (13%), Positives = 150/480 (31%), Gaps = 30/480 (6%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA I+ + S L+
Sbjct: 3 LTVNTNVASLNTQKNLNRASEALSTTMQRLSSGLKINSAKDDAAGLQISNRLTSQINGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S A+ M ++ +++ ++ D S+QSE L ++
Sbjct: 63 VATKNANDGISIAQTAEGAMQESTNILQRMRELALQSANGSNSAEDRASLQSEYAALTTE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA ++F G N L G+++ + + + + + +
Sbjct: 123 LTRIAETTTFGGRNLLDGSFGTTSFQVGANANETINVTLGNISATKIGSQQVQSQAITPS 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+S + + G ++ T + + AA +
Sbjct: 183 ASGVTGGAITVTGSGETKSITVDAGASAKDIAKQLDGAVTGLSASARTVAQLEVPAAASG 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
I + S S + A + ++D +
Sbjct: 243 TPANFSITVGDSKAIDMIGVTDNASLAEQLSSNASALGISVNFNEDTDELSITSDTGENI 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN------- 351
+ + V + + + + D + + +
Sbjct: 303 VFGAVSTTGVTTEYGGVTVNVQDGSGKYAASGTAIDEDFIATGAVELNSSKSYSLAGDGV 362
Query: 352 --------------------TDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ + ++ ID I +G++ +R
Sbjct: 363 DGLFAETGTTTASSKLTSVADSSITTAEGAQSAIAVIDKAISNIDTQRADLGAVQNRFDS 422
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + + R+ DAD A+E+ L+ QT QQ + L+ N + +LSL +
Sbjct: 423 TVSNLQSIVENSTSARSRIQDADFAAETAELTKQQTLQQASTAILAQANQLPSSVLSLLQ 482
>gi|38050115|gb|AAR10676.1| phase 1 flagellin [Salmonella enterica]
Length = 491
Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats.
Identities = 72/488 (14%), Positives = 135/488 (27%), Gaps = 39/488 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAK----------SVIGSFIRDDNGKVQITTIDYY 169
++ + FNG L D + A + + D VQ
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 170 LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT--- 226
S ++ + P + D+
Sbjct: 184 TAATVTGYTDSATAIDKSTFAASATTLGGTPAITGDLKFDDTTGKYYADVSGTTAKDGVY 243
Query: 227 -----------------------TSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTS 263
K T + + L AA +
Sbjct: 244 EVTVAADGKVTLTGTPTGPITAGFPSTATKDVKQTQQENADLTEAKAALTAAGVTGTASV 303
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
+ + + D + AT + T T +
Sbjct: 304 VKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGA 363
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+ S + + A E + ID + +G
Sbjct: 364 DGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLG 423
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
++ +R + + + + R+ D+D A+E + +S Q QQ L+ N
Sbjct: 424 AVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVP 483
Query: 444 ARILSLFR 451
+LSL R
Sbjct: 484 QNVLSLLR 491
>gi|38050107|gb|AAR10672.1| phase 1 flagellin [Salmonella enterica]
gi|38050109|gb|AAR10673.1| phase 1 flagellin [Salmonella enterica]
Length = 493
Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats.
Identities = 79/490 (16%), Positives = 141/490 (28%), Gaps = 41/490 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI------------------------- 154
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 155 ---RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
T ID + T D VY
Sbjct: 184 TAATVTGYTDSATAIDKSTFAASATALGGTPAITGDLKFDDTTGKYYADVSGTTAKDGVY 243
Query: 212 DASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
+ + K T +G +T + A T +G + + +
Sbjct: 244 EVTVAADGKVTLTGTPTGPITGGFPSTATKDVKQTQQENADLTEAKAALTAAGVAAAGTA 303
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
SV + G + A + T Y D ++ K
Sbjct: 304 SVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLG 363
Query: 332 PKE----------IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ S + + A E + ID +
Sbjct: 364 GADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAATTTTENPLQKIDAALAQVDTLRSD 423
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+ N
Sbjct: 424 LGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQ 483
Query: 442 STARILSLFR 451
+LSL R
Sbjct: 484 VPQNVLSLLR 493
>gi|38050061|gb|AAR10649.1| phase 1 flagellin [Salmonella enterica]
Length = 495
Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats.
Identities = 69/492 (14%), Positives = 135/492 (27%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDYAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDALNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA----- 234
+ + + D ++ D + + + +
Sbjct: 184 KPAQSIKLDTSALTATAIKDGVTGASTDGALKDGKVYSNGTDYYVEVSFADATDTAKGGF 243
Query: 235 -----------------------------------ANATFDQAKGIATIPVPLPAAPAAP 259
+ A
Sbjct: 244 LKVDVDSATGAVTVPGTAATAAATKPAGVKEVTEVQGKIPASTAIQDQLKAGGVTTADAA 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + + AT K + T+ T +
Sbjct: 304 TAEVVKMSYTDKNGKTIDGGYAVKVGNDYYAATQKKDGSFSVNTTSYTADDGTSKTALNQ 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + + A E + ID +
Sbjct: 364 LGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAATTTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|38050021|gb|AAR10629.1| phase 1 flagellin [Salmonella enterica]
gi|38050025|gb|AAR10631.1| phase 1 flagellin [Salmonella enterica]
gi|38050049|gb|AAR10643.1| phase 1 flagellin [Salmonella enterica]
gi|38050051|gb|AAR10644.1| phase 1 flagellin [Salmonella enterica]
Length = 495
Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats.
Identities = 68/492 (13%), Positives = 131/492 (26%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + + G + + +
Sbjct: 184 TAATVTGYANTAIALNNGTFKASATGLGGTDQQIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + + A T +T
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLAGGLPATATEDVKNVQVANADLTEAKAALTAAGVTG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY---- 355
+ D + D S+ T T T
Sbjct: 304 TASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNK 363
Query: 356 ------------------------------------NEKLAMEEMVSFIDTQIKCATAAA 379
E + ID +
Sbjct: 364 LGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAATTTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|38050037|gb|AAR10637.1| phase 1 flagellin [Salmonella enterica]
Length = 495
Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats.
Identities = 68/492 (13%), Positives = 131/492 (26%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + + G + + +
Sbjct: 184 TAATVTGYANTAIALNNGTFKASATGLGGTDQQIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + + A T +T
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLAGGLPATATEDVKNVQVANADLTEAKAALTAAGVTG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY---- 355
+ D + D S+ T T T
Sbjct: 304 TASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNK 363
Query: 356 ------------------------------------NEKLAMEEMVSFIDTQIKCATAAA 379
E + ID +
Sbjct: 364 LGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|120316|sp|P06175|FLIC_SALRU RecName: Full=Flagellin; AltName: Full=Phase 1-R flagellin
gi|47471|emb|CAA28190.1| unnamed protein product [Salmonella enterica subsp. enterica
serovar Rubislaw str. ATCC 10717]
Length = 493
Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats.
Identities = 72/490 (14%), Positives = 136/490 (27%), Gaps = 41/490 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAK----------SVIGSFIRDDNGKVQITTIDYY 169
++ + FNG L D + A + + D VQ
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 170 LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
S ++ + P + D+
Sbjct: 184 TAATVTGYTDSATAIDKSTFAASATTLGGTPAITGDLKFDDTTGKYYADVSGTTAKDGVY 243
Query: 230 AWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS---- 285
AA+ + A + + + A +A +
Sbjct: 244 EVTVAADGKVTLTGTPTGPITAGFPSTATKDVKQTQQENADLTEAKAALTAAGVAAAGHR 303
Query: 286 ------------------------DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
D + AT + T T +
Sbjct: 304 SVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADNGTSKTALNKLG 363
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ S + + A E + ID +
Sbjct: 364 GADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSD 423
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+ N
Sbjct: 424 LGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQ 483
Query: 442 STARILSLFR 451
+LSL R
Sbjct: 484 VPQNVLSLLR 493
>gi|218187850|gb|EEC70277.1| hypothetical protein OsI_01097 [Oryza sativa Indica Group]
Length = 492
Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats.
Identities = 74/490 (15%), Positives = 153/490 (31%), Gaps = 40/490 (8%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I TN S+++A + L +L R+SSGLR++ A D+AA +I++ S L+
Sbjct: 3 STINTNVSSLTAQRNLSLSQSSLNTSIQRLSSGLRINSAKDDAAGLAISERFTSQIRGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S A+ + D++ ++ D K+IQ+E+ QL S+
Sbjct: 63 QAVRNANDGISLAQTAEGALKSTGDILQRVRELAVQSANATNSSGDRKAIQAEVGQLLSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT------------- 165
+ IA + FNG+ L GS+T + + +
Sbjct: 123 MDRIAGNTEFNGQKLLDGSFGSATFQVGANANQTITATTGNFRTNNYGAQLTASASGAAT 182
Query: 166 ------------------------IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
++ + S+ + + + + E +
Sbjct: 183 SGASAGSAGAAAGTVVIAGLQTKTVNVAASGTAADIASAVNAVADSTGVTASARNVSELK 242
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
++ + ++ + +++ + +
Sbjct: 243 FSGTGSFTLAVKGDNSTAANVTFNVSATSTAAGLAEAVKAFNDVSSQTGVTAKLNSDSSG 302
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
T+ S + A+ G + A T S + T + E
Sbjct: 303 LILTNESGNDINVANGASSAAGITLASQDAATTQSSGTLTFTTATAAGTGATVASRGTVE 362
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ + T + + + + + ID +
Sbjct: 363 YKSDKGYTVSGTGGTMTTTAATSSTLTKVSDIDVSTVDGSTKALKIIDAALSAVNGQRAS 422
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
G++ SR + ++ + + R+ DAD A+E+ LS Q QQ ++ N
Sbjct: 423 FGALQSRFETTVNNLQSTSENMSASRSRIQDADFAAETANLSRSQILQQAGTAMVAQANQ 482
Query: 442 STARILSLFR 451
+LSL R
Sbjct: 483 LPQGVLSLLR 492
>gi|315139288|gb|ADT80807.1| flagellin [Salmonella enterica subsp. enterica serovar Typhimurium]
Length = 495
Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats.
Identities = 68/492 (13%), Positives = 130/492 (26%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANNTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + + G + + +
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + + A T +T
Sbjct: 244 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVKNVQVANADLTEAKAALTAAGVTG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY---- 355
+ D + D S+ T T T
Sbjct: 304 TASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNK 363
Query: 356 ------------------------------------NEKLAMEEMVSFIDTQIKCATAAA 379
E + ID +
Sbjct: 364 LGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + R+ D+D A+E +S Q QQ L+
Sbjct: 424 SDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVPNMSRAQILQQAGTSVLAQA 483
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 484 NQVPQNVLSLLR 495
>gi|327480473|gb|AEA83783.1| flagellin type B [Pseudomonas stutzeri DSM 4166]
Length = 500
Score = 213 bits (541), Expect = 6e-53, Method: Composition-based stats.
Identities = 66/498 (13%), Positives = 143/498 (28%), Gaps = 48/498 (9%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L+ + L R+S+G R++ A D+AA I+ + S L+
Sbjct: 3 LTVNTNIASLNTQRNLQSSSNALGTSMQRLSTGSRINSAKDDAAGLQISNRLTSQISGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQ 118
G S A+ + ++ +++ +++ D ++Q E+ LQ++
Sbjct: 63 VAVRNANDGISLAQTAEGALQQSTNILQRMRDLSLQAANGSNDAVDRSALQKEVGALQNE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA ++F G L GS+ + + + Y D L
Sbjct: 123 LSRIAETTTFGGRKLLDGSFGSTAFQVGANANETINVAIGSAAADKMGSYTSDKSGSKLG 182
Query: 179 SSTDGTERYGL-----------------------------------------LDRNHKIK 197
++
Sbjct: 183 LASLAATATNYQADGTLKISANGKEYDAVAITTTDTAAAVVKKINDAGSPVKATARTDAV 242
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ + S T +T G + A G
Sbjct: 243 LTKSANVGTFDLKIEVSKTDNTSVDTTIDLKGMTDFDQVVSAVNASGSGLAAKVNGDGTL 302
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
++ G S + +A + + T ++ + + A
Sbjct: 303 EISSADGASIKFTAGGQTNAATPAAIAAGDFKVQTRSAEDLNNDNVGDLSTAVDIGGVAT 362
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITR----HANTDAYNEKLAMEEMVSFIDTQIK 373
+ + + + + + + + ID I
Sbjct: 363 GAVATGAVKLSSSAAYSLSGTAAAKITGEAAGSLAKISDVDVSTAYGAQNAIDIIDGAIA 422
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G++ +R ++ + + V GR+ D D A+E+ LS Q QQ
Sbjct: 423 FIDSQRSDLGAVQNRFDNTIANLQSISENVSAARGRIQDTDFAAETANLSKNQILQQAGT 482
Query: 434 QALSIVNNSTARILSLFR 451
L+ +LSL +
Sbjct: 483 AILAQAKQLPQAVLSLLQ 500
>gi|229825727|ref|ZP_04451796.1| hypothetical protein GCWU000182_01090 [Abiotrophia defectiva ATCC
49176]
gi|229790290|gb|EEP26404.1| hypothetical protein GCWU000182_01090 [Abiotrophia defectiva ATCC
49176]
Length = 506
Score = 213 bits (540), Expect = 6e-53, Method: Composition-based stats.
Identities = 70/503 (13%), Positives = 146/503 (29%), Gaps = 55/503 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ A+ L + L+ R+SSG +++ A+D+AA +SI++ M++ +L
Sbjct: 3 INNNISALRANTNLSRVEKRLDKSTRRLSSGYKINSASDDAAGFSISRKMRTQIKSLERA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ +++ +K D +IQ E+ QL +++
Sbjct: 63 SQNAADGISVMQTAEGALNEVSAMLNRMKELAVQSANDTYSGDDRDAIQQEMDQLLAEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L + + + V + + + V S
Sbjct: 123 RISTDTGFNEKKLLNGEANRRSVTQNDGVSVVRSSESVPNGKYKLTVNEDPKKAVYTGGS 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT------------------------ 216
++ ++ + +V+ +
Sbjct: 183 VSSSDFNEDSTLQGRVIINGEVININPGDTAETVLNKIRLGAERAGLSLAGNGGGPDADG 242
Query: 217 ---ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
L + A +AK I T+ + + +
Sbjct: 243 EELYGGYTAGPLEEGAELLFVSKAYGSKAKIDIKIEGTASKLKDGTTYTAEENADRLAAA 302
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ A + T ST E
Sbjct: 303 LNLPRKMEPDEVKKGSDAKVTLDEGFEKTATVSTDGDKVLVKDKGGFELELKVKDYTTEN 362
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT------------------QIKCA 375
+ + + N + + + ID+ I
Sbjct: 363 DKAGEVDLTVFDAGYMTLQVGANTGESFDVSIGRIDSETLGLKGINIRTNSEAEKAIAMI 422
Query: 376 TAA-------AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
A K+G+ +R+ + + + R++D DMA E T + +
Sbjct: 423 DNAITRLSAERAKLGAYQNRLEHTILSVDETTEDMTSAFSRIMDTDMAEEMTEFTQQKVL 482
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
Q L+ N IL+L +
Sbjct: 483 SQAGTSVLAQANERPNTILTLLQ 505
>gi|116489816|gb|ABJ98815.1| phase I flagellin middle domain variant C11 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 426
Score = 213 bits (540), Expect = 7e-53, Method: Composition-based stats.
Identities = 69/452 (15%), Positives = 128/452 (28%), Gaps = 32/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D T + + + D T L+ + S
Sbjct: 124 DRVSGQTQFNGVKVLAQDNT-LTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVS 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T T + +
Sbjct: 183 DTAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYVTGTASVVKMS 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
TI L ++ + S S+ + G S +
Sbjct: 243 YTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNK-------- 294
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ S + + A
Sbjct: 295 --------------------LGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAAT 334
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
E + ID + +G++ +R + + + + R+ D+D A+E
Sbjct: 335 TTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEV 394
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 395 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 426
>gi|210062496|ref|YP_002300513.1| phase II flagellin [Salmonella enterica subsp. enterica serovar
Typhi str. 404ty]
gi|134270038|emb|CAL91911.1| phase II flagellin [Salmonella enterica subsp. enterica serovar
Typhi str. 404ty]
Length = 488
Score = 213 bits (540), Expect = 7e-53, Method: Composition-based stats.
Identities = 81/485 (16%), Positives = 155/485 (31%), Gaps = 36/485 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ ++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLSSIQAEITQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG---------------------------- 151
++ + FNG L + A
Sbjct: 124 DRVSDQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNINGATKATA 183
Query: 152 -----SFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
F + Y ++ E+ + +ST + +D + + +VL
Sbjct: 184 SDLVSKFKATGTDNYDVAGNTYTVNIESGAVQNSTGNSMYISAVDGSLTTSNDTKVLGQG 243
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ A+ + T G K +A G + + ++ T+
Sbjct: 244 VDATALAAAGQGKAQDATFTLKGIEYKVTSAATTNGNGTYEATINNEKVVFTISGSTATT 303
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
G+ + Y + + + K + SD N + + +
Sbjct: 304 GTAASLATDKPIYKTAAGTLTTEQVSNKAATVSDLDIKNGKKTGSSLVVDGQNYKVSKDG 363
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
D N DA + E+ + ID + A +G++
Sbjct: 364 VVTDAVDNKVMYVGKSQGGSPILVNADAAKTMQSTEKPLETIDKALAKVDALRSDLGAVQ 423
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + + + R+ D+D A+E + +S Q QQ L+ N +T +
Sbjct: 424 NRFDSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQTTQNV 483
Query: 447 LSLFR 451
LSL R
Sbjct: 484 LSLLR 488
>gi|476236|gb|AAA17857.1| phase 1 flagellin [Salmonella enterica]
gi|50830916|gb|AAT81623.1| phase 1 flagellin [Salmonella enterica subsp. houtenae serovar
45a,b:g,z51:-]
Length = 504
Score = 213 bits (540), Expect = 7e-53, Method: Composition-based stats.
Identities = 75/501 (14%), Positives = 146/501 (29%), Gaps = 52/501 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q S++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A+
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKQATA 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ Y +D + + + Y + Q
Sbjct: 184 GDLKSNFKNVTGYDTYAVGADSYRVDINSGAVTDDAGTDKIYVNAANGKLTTDDAQNNTA 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
+D+ S + + +AT + + T +G
Sbjct: 244 VDLFKTTKSSAGTAESKAIATAIKGGKEGDTFDYKGVSFTIDTKNGTDGNGTVSTTINGE 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV-------------- 311
+ + + + + + + + + + T +
Sbjct: 304 KVTLTVADITTGAADVNAATLQSSKNVYTSVVNGQFTFDDKTKNEGAKLSDLEANNAVKG 363
Query: 312 -GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ + K T ++ N DA K + ++ ID+
Sbjct: 364 ESKITVNGAEYTANAEGDKITLAGKTMFIDKTTSGVSTLINEDAAAAKKSTANPLASIDS 423
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ A +G+I +R + + + R+ DAD A+E + +S Q QQ
Sbjct: 424 ALSKVDAVRSSLGAIQNRFDSAITNLGNTVNNLTSARSRIEDADYATEVSNMSRAQILQQ 483
Query: 431 LAVQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 AGTSVLAQANQVPQNVLSLLR 504
>gi|310764870|gb|ADP09820.1| Phase 1 flagellin [Erwinia sp. Ejp617]
Length = 484
Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats.
Identities = 75/481 (15%), Positives = 150/481 (31%), Gaps = 32/481 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L +L R+SSGLR++ A D+AA +I+ + ++
Sbjct: 4 VINTNALSLMAQTNLNKSQASLGTAIQRLSSGLRINSAKDDAAGQAISNRFTASIEGMTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVM---STIKNKITAGVERGTDSKSIQSEITQLQSQL 119
+ G S + +++ D + + + G +D KS+Q EIT +++
Sbjct: 64 AARNANDGISLAQTTEGALNEINDNLLNIRRLTEQALNGTNSESDKKSVQEEITARLAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA+ + FNG N L I + D D L S
Sbjct: 124 GRIAKDTDFNGVNVLDGSTSQLQIQIGAKDGQTIGIDLPAMDLEKLGLDGYDVTGALASS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T + V + + ++ D + K ++ S
Sbjct: 184 GAKPTLDAAGTAVTGTVTVGGEDIALDTTAMSDIETAVGAAKGDVSLYSVGEAGKETYYA 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
V L A T++ S A + + I
Sbjct: 244 YDTTKGEATEVILKGDGAGALTSATAGKKLSAVDADILAHGPSQLTGKGEVLKAGQEIDL 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ T + + + + ++ + + + D+G T E
Sbjct: 304 NGTAHKLTEQDMTDIATTMGGNAASVANMELIGLTDDAGAVKYYAVHTDTTGVKTGTEIT 363
Query: 360 AMEEM-----------------------------VSFIDTQIKCATAAAGKIGSISSRIH 390
+ ++ +D+ + + +G++ +R +
Sbjct: 364 LADNAGAIAATKVADLKAADLQKVGELTNGGGGLLATMDSALAQVDSFRSGLGAVQNRFN 423
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + + R++DAD ++E + +S QQ + LS N +LSL
Sbjct: 424 SIISNLNTTVNNMTEAKSRILDADFSAEVSSMSRANILQQAGITVLSQANQVPQNVLSLL 483
Query: 451 R 451
R
Sbjct: 484 R 484
>gi|168244806|ref|ZP_02669738.1| flagellin [Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|194451133|ref|YP_002046008.1| flagellin [Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|200390646|ref|ZP_03217257.1| flagellin [Salmonella enterica subsp. enterica serovar Virchow str.
SL491]
gi|38050103|gb|AAR10670.1| phase 1 flagellin [Salmonella enterica]
gi|38050105|gb|AAR10671.1| phase 1 flagellin [Salmonella enterica]
gi|50830936|gb|AAT81633.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Heidelberg]
gi|50830938|gb|AAT81634.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Heidelberg]
gi|50830940|gb|AAT81635.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Heidelberg]
gi|50830942|gb|AAT81636.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Heidelberg]
gi|50830944|gb|AAT81637.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Heidelberg]
gi|50830946|gb|AAT81638.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Heidelberg]
gi|194409437|gb|ACF69656.1| flagellin [Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|199603091|gb|EDZ01637.1| flagellin [Salmonella enterica subsp. enterica serovar Virchow str.
SL491]
gi|205336357|gb|EDZ23121.1| flagellin [Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
Length = 493
Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats.
Identities = 72/490 (14%), Positives = 136/490 (27%), Gaps = 41/490 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAK----------SVIGSFIRDDNGKVQITTIDYY 169
++ + FNG L D + A + + D VQ
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 170 LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
S ++ + P + D+
Sbjct: 184 TAATVTGYTDSATAIDKSTFAASATTLGGTPAITGDLKFDDTTGKYYADVSGTTAKDGVY 243
Query: 230 AWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS---- 285
AA+ + A + + + A +A +
Sbjct: 244 EVTVAADGKVTLTGTPTGPITAGFPSTATKDVKQTQQENADLTEAKAALTAAGVAAAGTA 303
Query: 286 ------------------------DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
D + AT + T T +
Sbjct: 304 SVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLG 363
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ S + + A E + ID +
Sbjct: 364 GADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSD 423
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+ N
Sbjct: 424 LGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQ 483
Query: 442 STARILSLFR 451
+LSL R
Sbjct: 484 VPQNVLSLLR 493
>gi|476256|gb|AAA17867.1| phase 1 flagellin [Salmonella enterica]
gi|38050015|gb|AAR10626.1| phase 1 flagellin [Salmonella enterica]
gi|50830918|gb|AAT81624.1| phase 1 flagellin [Salmonella enterica VII 1,40:g,z51:--]
gi|308054795|gb|ADO01444.1| flagellin [Salmonella enterica subsp. houtenae]
Length = 504
Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats.
Identities = 74/501 (14%), Positives = 145/501 (28%), Gaps = 52/501 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q S++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A+
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKQATA 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ Y +D + + + Y + Q
Sbjct: 184 GDLKSNFKNVTGYDTYAVGADSYRVDINSGAVTDDAGTDKIYVNAANGKLTTDDAQNNTA 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
+D+ S + + +AT + + T +G
Sbjct: 244 VDLFKTTKSSAGTAESKAIATAIKGGKEGDTFDYKGVSFTIDTKNGTDGNGTVSTTINGE 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV-------------- 311
+ + + + + + + + + + T +
Sbjct: 304 KVTLTVADITTGAADVNAATLQSSKNVYTSVVNGQFTFDDKTKNEGAKLSDLEANNAVKG 363
Query: 312 -GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ + K ++ N DA K + ++ ID+
Sbjct: 364 ESKITVNGAEYTANAEGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASIDS 423
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ A +G+I +R + + + R+ DAD A+E + +S Q QQ
Sbjct: 424 ALSKVDAVRSSLGAIQNRFDSAITNLGNTVNNLTSARSRIEDADYATEVSNMSRAQILQQ 483
Query: 431 LAVQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 AGTSVLAQANQVPQNVLSLLR 504
>gi|77165830|ref|YP_344355.1| flagellin [Nitrosococcus oceani ATCC 19707]
gi|76884144|gb|ABA58825.1| Flagellin [Nitrosococcus oceani ATCC 19707]
Length = 492
Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats.
Identities = 79/489 (16%), Positives = 159/489 (32%), Gaps = 40/489 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I TN ++++A + L L+ +R+SSG R+++A D+AA +I + M S L+
Sbjct: 4 TINTNIASLNAQRNLNSSQGALQTSLERLSSGFRINNAKDDAAGLAITERMTSQIRGLAQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
+ S A+ G+ ++ +++ ++ +D ++Q E++QLQS+L
Sbjct: 64 ATRNANDAISVTQTAEGGLKESSNILQRMRELAVQSANDTNSDSDRANLQKEVSQLQSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV----------QITTIDYY 169
+A ++FNG+N L I + S N IT +
Sbjct: 124 NRLADSTTFNGKNLLDGSFTGQKFQIGANANESIGFSINSARATTLGEQLGKSITNVGAG 183
Query: 170 LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
L +T + + V + + + + +
Sbjct: 184 LAVAADTSGGNTVAAQNITVNGSTGSKMVALTGNESAKAIADLVNEQSGSTGVTASAQTS 243
Query: 230 AWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
L A + + + AA +A TT+ + A SA
Sbjct: 244 VTLDNVAADGTVSFTLQSSGGGSAAAISAGVTTTDLTNLADAVNAQSAETGVTATLSENR 303
Query: 290 RATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRH 349
A T + + + + D + +V ++
Sbjct: 304 DAITLENAEGEDILVSDADNTGVAAAAAAFDTGGQSLIKTDGATGTANDSIVVGGQVSFQ 363
Query: 350 ANTDAYNE---------------------------KLAMEEMVSFIDTQIKCATAAAGKI 382
++ + +S ID + +
Sbjct: 364 SDKSFTTTSDTGNTVVGAGGVTSALSSVAQIDLSSQDGSNSALSVIDKALGSIATQRADL 423
Query: 383 GSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNS 442
G++ +R ++ + + R+ DAD ASE+ ++ Q QQ L+ N+
Sbjct: 424 GALQNRFESTISNLQNVSENTSAARSRIRDADFASETAEMTRNQILQQAGTAMLAQANSL 483
Query: 443 TARILSLFR 451
+LSL R
Sbjct: 484 PQGVLSLLR 492
>gi|168822999|ref|ZP_02834999.1| flagellin [Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
gi|205340668|gb|EDZ27432.1| flagellin [Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
gi|320085424|emb|CBY95205.1| Flagellin Phase 1-R flagellin [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 493
Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats.
Identities = 72/490 (14%), Positives = 136/490 (27%), Gaps = 41/490 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAK----------SVIGSFIRDDNGKVQITTIDYY 169
++ + FNG L D + A + + D VQ
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 170 LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
S ++ + P + D+
Sbjct: 184 TAATVTGYTDSATAIDKSTFAASATTLGGTPAITGDLKFDDTTGKYYADVSGTTAKDGVY 243
Query: 230 AWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS---- 285
AA+ + A + + + A +A +
Sbjct: 244 EVTVAADGKVTLTGTPTGPITAGFPSTATKDVKQTQQENADLTEAKAALTAAGVAAAGTA 303
Query: 286 ------------------------DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
D + AT + T T +
Sbjct: 304 SVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLG 363
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ S + + A E + ID +
Sbjct: 364 GADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSD 423
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G++ +R + + + + R+ D+D A+E + +S Q QQ L+ N
Sbjct: 424 LGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQ 483
Query: 442 STARILSLFR 451
+LSL R
Sbjct: 484 VPQNVLSLLR 493
>gi|146307857|ref|YP_001188322.1| flagellin domain-containing protein [Pseudomonas mendocina ymp]
gi|145576058|gb|ABP85590.1| flagellin domain protein [Pseudomonas mendocina ymp]
Length = 492
Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats.
Identities = 58/489 (11%), Positives = 134/489 (27%), Gaps = 40/489 (8%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L+ R+S+G R++ A D+AA I+ + S L
Sbjct: 3 LTVNTNVASLNTQRNLNTSSKGLDTSLQRLSTGFRINSAKDDAAGLQISNRLTSQISGLG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQ 118
+ G S A+ + ++ ++ +++ + ++Q E+ QLQ +
Sbjct: 63 VATRNANDGISLAQTAEGALQQSTGILQRMRDLALQAANGSNGATERAALQGEVAQLQQE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I+ +SF G L GS + + + +
Sbjct: 123 LNRISDTTSFGGRKILDGSFGSQSFQVGANAYETISVSIGSAATDRIGINRFTTSGAAGS 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ G + K + + A + +
Sbjct: 183 AIASGATFSATSGSAYTSTGFSITSKLSNGAETIALTASGSASEVARAINSKSDTTGVTA 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG--------------- 283
+ + + + S ++
Sbjct: 243 NARTVATLGGFTTSGTISFSLYGANSKTVESDKSTVSAVVTDVTDLRALADAINKETGKT 302
Query: 284 ----------------------NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
+ AT VD +
Sbjct: 303 GISAVSKGSTIELVNDRGDAIMIRESSQAATLTARDFKGENDVGGAATIAAGGGARVDGQ 362
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ + G + + ++ + I+ I + +
Sbjct: 363 VQLEAADAFQVTGLSGGLGADGFSALNSVKEIDISTATGAQDALGIINGAISNIDSQRAQ 422
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G++ +R ++ + + R+ D D A+E++ L+ Q QQ L+ N
Sbjct: 423 LGAVQNRFENTISNLQNIAENSSAARSRIRDTDFAAETSELTKNQILQQAGTAILAQANQ 482
Query: 442 STARILSLF 450
+LSL
Sbjct: 483 LPQAVLSLL 491
>gi|116489818|gb|ABJ98816.1| phase I flagellin middle domain variant C79 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 420
Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats.
Identities = 64/452 (14%), Positives = 128/452 (28%), Gaps = 38/452 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGET---------------------------- 155
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + ++ + + + T + +
Sbjct: 156 -------IDIDLKQINSQTLGLDTLNVQQKYKVSDTAATVTGYADTTIALDNSTFKASAT 208
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
I L + + + + D + AT +
Sbjct: 209 GLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKDGYYEVSVVKVGDDYYSATQNKDGSI 268
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T T + + S + + A
Sbjct: 269 SINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAAT 328
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
E + ID + +G++ +R + + + + R+ D+D A+E
Sbjct: 329 TTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEV 388
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 389 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 420
>gi|326319076|ref|YP_004236748.1| flagellin domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323375912|gb|ADX48181.1| flagellin domain protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 492
Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats.
Identities = 74/490 (15%), Positives = 154/490 (31%), Gaps = 40/490 (8%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I TN S+++A + L +L R+SSGLR++ A D+AA +I++ S L+
Sbjct: 3 STINTNVSSLTAQRNLSLSQSSLNTSIQRLSSGLRINSAKDDAAGLAISERFTSQIRGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S A+ + D++ ++ D K+IQ+E+ QL S+
Sbjct: 63 QAVRNANDGISLAQTAEGALKSTGDILQRVRELAVQSANATNSSGDRKAIQAEVGQLLSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT------------- 165
+ IA + FNG+ L GS+T + + +
Sbjct: 123 MDRIAGNTEFNGQKLLDGSFGSATFQVGANANQTITATTGNFRTNNYGAQLTASASGAAT 182
Query: 166 ------------------------IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
++ + S+ + + + + E +
Sbjct: 183 SGASAGSAGAAAGTVVIAGLQTKTVNVAASGTAADIASAVNAVADSTGVTASARNVSEMK 242
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
++ + ++ + +++ + +
Sbjct: 243 FSGTGSFTLAVKGDNSTAANVTFNVSATSTAAGLAEAVKAFNDVSSQTGVTAKLNSDSSG 302
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
T+ S + A+ + G + A T S + T + E
Sbjct: 303 LILTNESGNDINIANGSSSAAGITLASQDAATTQSSGTLTFTTATAAGTGATVASRGTVE 362
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ + T + + + + + ID +
Sbjct: 363 YKSDKGYTVSGTGGTMTTTAATSSTLTKVSDIDVSTVDGSTKALKIIDAALSAVNGQRAS 422
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
G++ SR + ++ + + R+ DAD A+E+ LS Q QQ ++ N
Sbjct: 423 FGALQSRFETTVNNLQSTSENMSASRSRIQDADFAAETANLSRSQILQQAGTAMVAQANQ 482
Query: 442 STARILSLFR 451
+LSL R
Sbjct: 483 LPQGVLSLLR 492
>gi|10801725|dbj|BAB16757.1| flagellin [Acidovorax avenae subsp. avenae]
Length = 492
Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats.
Identities = 73/490 (14%), Positives = 153/490 (31%), Gaps = 40/490 (8%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I TN S+++A + L +L R+SSGLR++ A D+AA +I++ S L+
Sbjct: 3 STINTNVSSLTAQRNLSLSQSSLNTSIQRLSSGLRINSAKDDAAGLAISERFTSQIRGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S A+ + D++ ++ D K+IQ+E+ QL S+
Sbjct: 63 QAVRNANDGISLAQTAEGALKSTGDILQRVRELAVQSANATNSSGDRKAIQAEVGQLLSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT------------- 165
+ IA + FNG+ L GS+T + + +
Sbjct: 123 MDRIAGNTEFNGQKLLDGSFGSATFQVGANANQTITATTGNFRTNNYGAQLTASASGAAT 182
Query: 166 ------------------------IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
++ + S+ + + + + E +
Sbjct: 183 SGASAGSAGAAAGTVVIAGLQTKTVNVAASGTAADIASAVNAVADSTGVTASARNVSELK 242
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
++ + ++ + +++ + +
Sbjct: 243 FSGTGSFTLAVKGDNSTAANVTFNVSATSTAAGLAEAVKAFNDVSSQTGVTAKLNSDSSG 302
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
T+ S + A+ G + A T S + T + E
Sbjct: 303 LILTNESGNDINVANGASSAAGITLASQDAATTQSSGTLTFTTATAAGTGATVASRGTVE 362
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ + T + + + + + ID +
Sbjct: 363 YKSDKGYTVSGTGGTMTTTAATSSTLTKVSDIDVSTVDGSTKALKIIDAALSAVNGQRAS 422
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
G++ SR + ++ + + R+ DAD A+E+ LS Q QQ ++ N
Sbjct: 423 FGALQSRFETTVNNLQSTSENMSASRSRIQDADFAAETANLSRSQILQQAGTAMVAQANQ 482
Query: 442 STARILSLFR 451
+LSL +
Sbjct: 483 LPQGVLSLLK 492
>gi|38050125|gb|AAR10681.1| phase 1 flagellin [Salmonella enterica]
Length = 499
Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 72/496 (14%), Positives = 130/496 (26%), Gaps = 47/496 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ V S + + A T
Sbjct: 184 KAVTGVSNLDTTGLTGAAIKTGVAGATTTSGSIKNDKVYYDDATKNYYVEVDFSDAADTA 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A + V + + S A T + +
Sbjct: 244 KNGYYKVNVADDGTVTMGASTAKEAAKPAGVVEVTKTQEEKAIKASADVKAALTAGGVDT 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE-- 357
T V + D T
Sbjct: 304 ADAATAEMVKMSYTDKNGKTIDGGYAVKVGDNYYAATQKKDGSFSVNTTSYIATDGTTKT 363
Query: 358 ------------------------------------------KLAMEEMVSFIDTQIKCA 375
E + ID +
Sbjct: 364 ALNQLGGADGKTEVVTIDGKTYNASKAAGHDFKAQPELAEVATKTTENPLQKIDAALAQV 423
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 DTLRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSV 483
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 LAQANQVPQNVLSLLR 499
>gi|291518679|emb|CBK73900.1| Flagellin and related hook-associated proteins [Butyrivibrio
fibrisolvens 16/4]
Length = 502
Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 73/501 (14%), Positives = 139/501 (27%), Gaps = 52/501 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N A +AS+ L +++SSG +++ AAD+AA SI++ M+ L
Sbjct: 2 VVQHNMQAANASRMLGITTNAQGKSTEKLSSGFKINRAADDAAGLSISEKMRKQIRGLDQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
S G S V A+ +++ ++ + D SIQ EI QL +++
Sbjct: 62 ASTNASDGISAVQTAEGALTEVHSMLQRMNELAVQAANGTNSESDRSSIQDEILQLTTEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FN L+ D G+ + IA G T L +
Sbjct: 122 DRVAETTKFNETYLLKGDYGTKSQVIAAHDAGLAGTLTQNTTTATFTVNALAMGDTVTIG 181
Query: 180 STDGT--------------------------------------------ERYGLLDRNHK 195
T +
Sbjct: 182 GVKYTIGIQGTSVTDQLDKALSVLGTSSGALKPGEVVKIDGKSFTIAAATNADTSEVAAT 241
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + ST A T +A + + + ++
Sbjct: 242 ELSKFASQGSTIEYNGKVAKLFSTDNGGDPADGVDAKDATLITAAKAYQLMSNELRAASS 301
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
+ + A T V +
Sbjct: 302 IGCDAIVDLPTVKIGGNTEVYTKDTTDPTIAAAKTAVNGKLPTDVNTNPPLKVEFILTKG 361
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR-----HANTDAYNEKLAMEEMVSFIDT 370
V +S + ++ + + ++T A + I
Sbjct: 362 TAVVQKSLAFNLHVGSDADMTNKIGVTIESMTATALGLQGLNVGDATGKAATYAIDCIAD 421
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ +A +G+I +R+ + + + E R+ D DMA+E S Q
Sbjct: 422 ALAKVSAQRSGLGAIQNRLEHSIANLDNVVENTEASESRIRDTDMAAEMVTYSKNNILAQ 481
Query: 431 LAVQALSIVNNSTARILSLFR 451
L+ N +T ++SL +
Sbjct: 482 AGQSMLAQANQATQGVMSLLQ 502
>gi|293446305|ref|ZP_06662727.1| flagellin [Escherichia coli B088]
gi|331668617|ref|ZP_08369465.1| bacterial flagellin N-terminus subfamily [Escherichia coli TA271]
gi|112820171|gb|ABI23966.1| FliC [Escherichia coli]
gi|291323135|gb|EFE62563.1| flagellin [Escherichia coli B088]
gi|331063811|gb|EGI35722.1| bacterial flagellin N-terminus subfamily [Escherichia coli TA271]
Length = 491
Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 76/488 (15%), Positives = 143/488 (29%), Gaps = 39/488 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + I+ SIQ+EITQ ++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRIRELSVQATNGTNSDSDLSSIQAEITQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR------------------------ 155
++ + FNG L + A I
Sbjct: 124 DRVSEQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATG 183
Query: 156 -------DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
G V D + + +
Sbjct: 184 SDLISKFKATGTDNYQINGTDNYTVNVDSGVVQDKDGKQVYVSTADGSLTTSSDTQFKID 243
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ A + G AKG + + + T S
Sbjct: 244 ATKLAVAAKDLAQGNKIVYEGIEFTNTGTVAIDAKGNGKLTANVDGKAVEFTISGSTDTS 303
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + A T + ++ +N + + K G+T
Sbjct: 304 GTSATVAPTTALYKNSAGQLTATKVENKAATLSDLDLNAAKKTGSTLVVNGATYDVSADG 363
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEK-----LAMEEMVSFIDTQIKCATAAAGKIG 383
K + + ++ L+ + + NE + + ID + +G
Sbjct: 364 KTITETASGNNKVMYLSKSEGGSPILVNEDAAKSLQSTTNPLETIDKALAKVDNLRSDLG 423
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
++ +R + + + R+ DAD A+E + +S Q QQ L+ N +T
Sbjct: 424 AVQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQTT 483
Query: 444 ARILSLFR 451
+LSL R
Sbjct: 484 QNVLSLLR 491
>gi|308054797|gb|ADO01445.1| flagellin [Salmonella enterica subsp. houtenae]
Length = 504
Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 74/501 (14%), Positives = 145/501 (28%), Gaps = 52/501 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q S++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A+
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKQATA 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ Y +D + + + Y + Q
Sbjct: 184 GDLKSNFKNVTGYDTYAVGADSYRVDINSGAVTDDAGTDKIYVNAANGKLTTDDAQNNTA 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
+D+ S + + +AT + + T +G
Sbjct: 244 VDLFKTTKSSAGTAESKAIATAIKGGKEGDTFDYKGVSLTIDTKNGTDGNGTVSTTINGE 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV-------------- 311
+ + + + + + + + + + T +
Sbjct: 304 KVTLTVADITTGAADVNAATLQSSKNVYTSVVNGQFTFDDKTKNEGAKLSDLEANNAVKG 363
Query: 312 -GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ + K ++ N DA K + ++ ID+
Sbjct: 364 ESKITVNGAEYTANAEGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASIDS 423
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ A +G+I +R + + + R+ DAD A+E + +S Q QQ
Sbjct: 424 ALSKVDAVRSSLGAIQNRFDSAITNLGNTVNNLTSARSRIEDADYATEVSNMSRAQILQQ 483
Query: 431 LAVQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 AGTSVLAQANQVPQNVLSLLR 504
>gi|149182553|ref|ZP_01861025.1| hypothetical protein BSG1_08911 [Bacillus sp. SG-1]
gi|148849745|gb|EDL63923.1| hypothetical protein BSG1_08911 [Bacillus sp. SG-1]
Length = 413
Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 60/451 (13%), Positives = 140/451 (31%), Gaps = 43/451 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++ +++ N + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIEALNTFRQMGAANKGMANSMEKLSSGLRINKAGDDAAGLAISEKMRGQIRGLEQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ D K+I E+ QL+ ++
Sbjct: 63 GRNAQDGISMIQTAEGALNETHSILQRMRELAVQASNDTNNTDDRKAIGDELVQLKDEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FNG+ L L + + + +G + + +
Sbjct: 123 RISSTTEFNGKGLLDGSLSTGLHASNGAQVGDSLTTSAANAISVSKIDVSGAVAGTNYTF 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+D L K Q + D++ +G
Sbjct: 183 SDDDSGKLTLSATISGKTVSQSIDVADMTTSGKQTLDFNTLGISIELTGGGTGDTGTVVA 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + A + G++G+ + + ++
Sbjct: 243 NDITSDLVSIDTAAGDGSAKFLVGSNGTNTQETISFDFKKLDSSTLGS------------ 290
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ E +G + + + K
Sbjct: 291 ----------------------------ETNFSETTAGTGNGGNIHNLITDNTSVDSKDK 322
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ++ +D I + +G++ +R+ + + + + R+ D DMA E
Sbjct: 323 SDALIKVLDDAIIDVSTQRSAMGAVQNRLDHTINNLGTSAENLTAAESRIRDVDMAKEMM 382
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q + L+ N + +L L R
Sbjct: 383 NQTRESILAQASQAMLAKANQNPQGVLQLLR 413
>gi|38049774|gb|AAR10506.1| phase 2 flagellin [Salmonella enterica]
gi|38049776|gb|AAR10507.1| phase 2 flagellin [Salmonella enterica]
gi|38049896|gb|AAR10567.1| phase 2 flagellin [Salmonella enterica]
gi|308054831|gb|ADO01462.1| flagellin [Salmonella enterica subsp. enterica]
Length = 506
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 69/503 (13%), Positives = 140/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF----------------IRDDNGKVQI 163
++ + FNG L D + A V+
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
T + + ++ + + + + ++ +
Sbjct: 184 TAVTTKTYADNGTTLDASGLDDTAIKAAIGGTLGTASVTGGTVKFDADNNKYFVTIGGYT 243
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
A + N D +A A T +P+V ++ +
Sbjct: 244 GADATKNGDYEVNVATDGKVTLAPGATKTTIPAGATTKTEVQELKDTPTVVSADAKNALI 303
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ + + G + D + S
Sbjct: 304 AGGVDATDANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 344 LNITRHANTDAY-----------------------------------NEKLAMEEMVSFI 368
+ T + E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|261821178|ref|YP_003259284.1| flagellin domain protein [Pectobacterium wasabiae WPP163]
gi|261605191|gb|ACX87677.1| flagellin domain protein [Pectobacterium wasabiae WPP163]
Length = 422
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 64/454 (14%), Positives = 128/454 (28%), Gaps = 35/454 (7%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++A L L +R+SSG R++ A D+AA +IA ++ L
Sbjct: 1 MAVINTNSLSLTAQNNLNKSQSALGTAIERLSSGFRINSAKDDAAGQAIANRFTANIKGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQS 117
+ + G S + +++ + + I+ S+Q EI Q
Sbjct: 61 TQAARNANDGISVAQTTEGALNEINNNLQRIRELTVQAANGSNQDVDLDSVQGEIQQRLD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ ++ + FNG L +D G A I + + +
Sbjct: 121 EIDRVSSQTQFNGVKVLASDQGLKIQVGANDNETITINLQEITSSTLGLGGFSVSASTPK 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
S + G + + + + + A
Sbjct: 181 LSDSVTQLGDGTGAPTAPNFTDALASLNTGLGLTGDKALTAKDVTLHNVLDANGAGTAQY 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ V A +TT+ T + + +
Sbjct: 241 ALKVGNDVYAAKVTAGAVDVVKSTTTVTDNTLGGGATTVTLNDALVKLGGDGTTGYVSYQ 300
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + +T +
Sbjct: 301 GKNYQSADLAGGATTVAVGGAAPTATYAAA------------------------------ 330
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ + +D + + +G+I +R + + + R+ DAD+A+
Sbjct: 331 --KTVDPLKALDAALSKVDSLRSDLGAIQNRFESTVTNLNNTVNNLTSARSRIQDADIAT 388
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + +S Q QQ L+ N +LSL R
Sbjct: 389 EVSNMSKNQILQQAGTSVLAQANQVPQTVLSLLR 422
>gi|38050249|gb|AAR10743.1| phase 1 flagellin [Salmonella enterica]
Length = 506
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 69/503 (13%), Positives = 140/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF----------------IRDDNGKVQI 163
++ + FNG L D + A V+
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
T + + ++ + + + + ++ +
Sbjct: 184 TAVTTKAYADNGTTLDASGLDDTAIKAAIGGTLGTASVTGGAVKFDADNNKYFVTIGGYT 243
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
A + N D +A A T +P+V ++ +
Sbjct: 244 GADATKNGDYEVNVATDGKVTLAPGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALI 303
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ + + G + D + S
Sbjct: 304 AGGVDTTDANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDETTGAIKAKTTSYTA 363
Query: 344 LNITRHANTDAY-----------------------------------NEKLAMEEMVSFI 368
+ T + E + I
Sbjct: 364 DDGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|555648|gb|AAA53496.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Marrtens]
Length = 503
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 72/501 (14%), Positives = 140/501 (27%), Gaps = 52/501 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q S++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLSEI 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN--------GKVQITTIDYYLD 171
++ + FNG L D A I +
Sbjct: 123 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 182
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ + G + Y +++ + + D + + + +
Sbjct: 183 GDLKSSFKNVTGYDTYTAGANTYRVDINSGAVTDDAGTDKIYVNAANGQLTTDDAQNNTA 242
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS------------------------- 266
+ T A + + T
Sbjct: 243 VDLFKTTKSSAGTAESKAIAGAIKGGKEGDTFDYKGVSFTIDTKNGADGNGTVSTMINGE 302
Query: 267 ----------------GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
+ + + + + + T S N+ V
Sbjct: 303 KVTLTVADITAGAADVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKG 362
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ + K ++ N DA K + ++ ID+
Sbjct: 363 ESKITVNGAEYTANAEGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASIDS 422
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ A +G+I +R + + + R+ D+D A+E + +S Q QQ
Sbjct: 423 ALSKVDAVRSSLGAIQNRFDSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQ 482
Query: 431 LAVQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 483 AGTSVLAQANQVPQSVLSLLR 503
>gi|38050231|gb|AAR10734.1| phase 1 flagellin [Salmonella enterica]
gi|38050233|gb|AAR10735.1| phase 1 flagellin [Salmonella enterica]
Length = 506
Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats.
Identities = 74/503 (14%), Positives = 136/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG---------------------------- 151
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 152 -------SFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
V + + T N+K V
Sbjct: 184 TAVTTTAYADNGTTLNVSGLDDAAIKAATGGTVGAPTVTGGAVKFDADNNKYFVTIGGFT 243
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
D++ + GA A + + AA A
Sbjct: 244 GADLAKNGDYEVNVATDGTVTLAPGATKTTMPAGATTKTEVQELKTTPVAASADAKNALI 303
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
G + + ++ + Y + + T T
Sbjct: 304 AGGVDTADANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDETTGAIKAKTTSYTA 363
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME----------------EMVSFI 368
D G T +T T ++ + I
Sbjct: 364 ADGTTKTVANQLGGVDGKTEVVTIDGKTYNASKAEGHNFKAQPELAEVATKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|291191082|pdb|3A5X|A Chain A, L-Type Straight Flagellar Filament Made Of Full-Length
Flagellin
Length = 494
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 67/492 (13%), Positives = 130/492 (26%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 123 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + + G + + +
Sbjct: 183 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKD 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + + A T +T
Sbjct: 243 GYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVKNVQVANADLTEAKAALTAAGVTG 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY---- 355
+ D + D S+ T T T
Sbjct: 303 TASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNK 362
Query: 356 ------------------------------------NEKLAMEEMVSFIDTQIKCATAAA 379
E + ID +
Sbjct: 363 LGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLR 422
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+ ++ +R + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 423 SDLAAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 482
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 483 NQVPQNVLSLLR 494
>gi|10801723|dbj|BAB16756.1| flagellin [Acidovorax avenae subsp. avenae]
Length = 492
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 72/490 (14%), Positives = 154/490 (31%), Gaps = 40/490 (8%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I TN S+++A + L +L R+SSGLR++ A D+AA +I++ S L+
Sbjct: 3 STINTNVSSLTAQRNLSLSQSSLNTSIQRLSSGLRINSAKDDAAGLAISERFTSQIRGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S A+ + D++ ++ D K+IQ+E+ QL S+
Sbjct: 63 QAVRNANDGISLAQTAEGALKSTGDILQRVRELAVQSANATNSSGDRKAIQAEVGQLLSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT------------- 165
+ IA + FNG+ L GS+T + + +
Sbjct: 123 MDRIAGNTEFNGQKLLDGSFGSATFQVGANANQTITATTGNFRTNNYGAQLTASATGAAT 182
Query: 166 ------------------------IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
++ + S+ + + + + E +
Sbjct: 183 TGATAGSAGAAAGTVVIAGLQTKTVNVAAAGTASDIASAVNAVADSTGVTASARNVSEMK 242
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
++ + ++ + +++ + +
Sbjct: 243 FSGTGSFTLAVKGDNSTAANVTFNVSATSTAAGLAEAVKAFNDVSSQTGVTAKLNSDSSG 302
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
T+ S + A+ + G + A T S + + + E
Sbjct: 303 LILTNESGNDINIANGSSSAAGITLASQDAVTTQSSGTLTFTSATAAGTGVTVASRGTVE 362
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ + T + + + + + ID +
Sbjct: 363 YKSDKGYTVSGTGGTMTNATATSSTLTKVSDIDVSTVDGSTKALKIIDAALSAVNGQRAS 422
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
G++ SR + ++ + + R+ DAD A+E+ LS Q QQ ++ N
Sbjct: 423 FGALQSRFETTVNNLQSTSENMSASRSRIQDADFAAETANLSRSQILQQAGTAMVAQANQ 482
Query: 442 STARILSLFR 451
+LSL +
Sbjct: 483 LPQGVLSLLK 492
>gi|311105911|ref|YP_003978764.1| flagellin [Achromobacter xylosoxidans A8]
gi|310760600|gb|ADP16049.1| flagellin [Achromobacter xylosoxidans A8]
Length = 496
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 74/494 (14%), Positives = 151/494 (30%), Gaps = 44/494 (8%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN+ ++ A L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 3 AVINTNYLSLVAQNNLTKSQSTLGSAIERLSSGLRINSAKDDAAGQAIANRFTANVKGLT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S + +++ + + ++ +D SIQ+EI Q +
Sbjct: 63 QAARNANDGISIAQTTEGALNEINNNLQRVRQLAVQASTGTNSTSDLDSIQAEIEQRLGE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF------------------------- 153
+ ++ + FNG L +D + A
Sbjct: 123 IDRVSGQTQFNGVRVLASDNTLTVQVGANDNETITIDLKEITKGTLGLGNFTVAGDKQAT 182
Query: 154 -------------IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
V +D T ++ + G L V
Sbjct: 183 VDNMVKDFGATGYSSYSGTTVANLRVDVQSGAVTSGAATAVYVSATTGALTTTAGNTVAK 242
Query: 201 QVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPN 260
+ A+ T+ W K G T +
Sbjct: 243 AGGAGSADEAFAAAFAGKTQGAAATIGGVTWTKTDAPNNANGNGTFTATIDGKQLTVTVT 302
Query: 261 TTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDT 320
+S +G+ + + + T ++ + A T +D
Sbjct: 303 GSSAAAGTGASMAVSGGGLYMDAATYGAAVKFTTHATNENATAAAVVAAGGTKTGATLDI 362
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME---EMVSFIDTQIKCATA 377
T D + ++ +++ + + + LA + + ++ +D +
Sbjct: 363 GGTAYDVDSSGTVKANATGNVMYVQNDGKPSKKLIDSTLAQQPSRDPLAKLDAALASVDQ 422
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G++ +R + + + R+ DAD A+E + ++ Q QQ L+
Sbjct: 423 LRSGLGAVQNRFESTVANLNNTVNNLSAARSRIEDADYATEVSNMTKAQILQQAGTSVLA 482
Query: 438 IVNNSTARILSLFR 451
N +LSL R
Sbjct: 483 QANQVPQSVLSLLR 496
>gi|330502753|ref|YP_004379622.1| flagellin domain-containing protein [Pseudomonas mendocina NK-01]
gi|328917039|gb|AEB57870.1| flagellin domain-containing protein [Pseudomonas mendocina NK-01]
Length = 490
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 72/487 (14%), Positives = 147/487 (30%), Gaps = 38/487 (7%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L+ R+S+G R++ A D+AA IA + S L
Sbjct: 3 LTVNTNVASLNTQRNLNTSSKGLDTSLQRLSTGYRINSAKDDAAGLQIANRLTSQITGLG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQ 118
+ G S A+ + ++ ++ +++ + ++Q E+ QLQ +
Sbjct: 63 VATRNANDGISLAQTAEGALQQSTGILQRMRDLALQSANGSNGAIERSALQGEVAQLQQE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF------------------------- 153
L I+ +SF G L GS + + + +
Sbjct: 123 LNRISDTTSFGGRKILDGSFGSQSFQVGSNAYETISVSIGSAATDRIGINRVTTSGGAAQ 182
Query: 154 ----------IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
I+ L V + + G+ N K
Sbjct: 183 AIASGAAFSATSGSAYSSTSFNINSKLSDGDVAISGAASGSASEVARAVNAKSDETGVTA 242
Query: 204 KDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTS 263
V+ T F L+ + + AT T L A +
Sbjct: 243 NSRTVATLGGITASGTVSFNLSGVTSKSKDSDAATVSAVVTDTTDLKSLADAINRETGKT 302
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
G S + + S+ + V +
Sbjct: 303 GISAVSKGDTIELVSSRGDAIQITNYAGSGGASLQAKSFDGADDVGTAATIAEGGGARAD 362
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+ + G + NT + ++ + I+ I + ++G
Sbjct: 363 GQAADAFQVTGMTGGLGSDGFSELDAVNTIDISTATGAQDALGIINGAISNIDSQRAQLG 422
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
++ +R ++ + + R+ D D A+E++ L+ Q QQ L+ N
Sbjct: 423 AVQNRFENTISNLQNIAENSSAARSRIRDTDFAAETSELTKNQILQQAGTAILAQANQLP 482
Query: 444 ARILSLF 450
+LSL
Sbjct: 483 QAVLSLL 489
>gi|38049712|gb|AAR10475.1| phase 2 flagellin [Salmonella enterica]
gi|38049770|gb|AAR10504.1| phase 2 flagellin [Salmonella enterica]
Length = 506
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 71/503 (14%), Positives = 139/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF----------------IRDDNGKVQI 163
++ + FNG L D + A V+
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
T + + + T+ + + ++ F
Sbjct: 184 TAVTAKAYADNGTTLDVSGLTDAAIKTATGGTNGTPAVTGGTVKFDADNNKYFVTIGGFT 243
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
A + N D +A A T +P+V ++ +
Sbjct: 244 GADAAKNGDYEVNVATDGTVTLAPGATKTTMPAGATTKTEVQELKDTPAVVSAEAKNALI 303
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ + + G + D + S
Sbjct: 304 AGGVDTADANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDETTGAIKAKTTSYTA 363
Query: 344 LNITRHANTDAY-----------------------------------NEKLAMEEMVSFI 368
+ T + E + I
Sbjct: 364 DDGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|308054751|gb|ADO01422.1| flagellin [Salmonella enterica subsp. arizonae]
gi|308054793|gb|ADO01443.1| flagellin [Salmonella enterica subsp. houtenae]
Length = 504
Score = 211 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 72/501 (14%), Positives = 140/501 (27%), Gaps = 52/501 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q S++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN--------GKVQITTIDYYLD 171
++ + FNG L D A I +
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ + G + Y +++ + + D + + + +
Sbjct: 184 GDLKSSFKNVTGYDTYTAGANTYRVDINSGAVTDDAGTDKIYVNAANGQLTTDDAQNNTA 243
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS------------------------- 266
+ T A + + T
Sbjct: 244 VDLFKTTKSSAGTAESKAIAGAIKGGKEGDTFDYKGVSFTIDTKNGADGNGTVSTMINGE 303
Query: 267 ----------------GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
+ + + + + + T S N+ V
Sbjct: 304 KVTLTVADITAGAADVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKG 363
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ + K ++ N DA K + ++ ID+
Sbjct: 364 ESKITVNGAEYTANAEGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASIDS 423
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ A +G+I +R + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 ALSKVDAVRSSLGAIQNRFDSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQ 483
Query: 431 LAVQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 AGTSVLAQANQVPQSVLSLLR 504
>gi|300917366|ref|ZP_07134034.1| bacterial flagellin [Escherichia coli MS 115-1]
gi|300415386|gb|EFJ98696.1| bacterial flagellin [Escherichia coli MS 115-1]
Length = 443
Score = 211 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 77/453 (16%), Positives = 142/453 (31%), Gaps = 16/453 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ L
Sbjct: 124 DRVSGQTQFNGVNVLSKDGSMKIQVGANDGQTISIDLKKI-------------DSSTLGL 170
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + L N + + + + KL + + L N
Sbjct: 171 NGFSVSKNSLNVSNAITSIPQDAGDKPVDVNFGTTTESAAIAAKLGVSDTSSLSLHNILD 230
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
K A V A + + + ++ + G D
Sbjct: 231 KDGKATADYVVQSGKDFYAASVDAASGKVTLNTIDVTYDDYANGVDDAKQTDQLIKVSAD 290
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G V G + D + L + + N E
Sbjct: 291 KDGAAQGFVTLQGKNYSAGDAAVILKNGATGLALTDLNLSDVTDTNGKVTTTATEQFEGA 350
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ E+ ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 351 STEDPLALLDKAIASVDKFRSSLGAVQNRLDSAITNLNNTTTNLSEAQSRIQDADYATEV 410
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 411 SNMSKAQIIQQAGNSVLSKANQVPQQVLSLLQG 443
>gi|476238|gb|AAA17858.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Newmexico]
gi|38050013|gb|AAR10625.1| phase 1 flagellin [Salmonella enterica]
Length = 504
Score = 211 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 71/501 (14%), Positives = 139/501 (27%), Gaps = 52/501 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q S++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN--------GKVQITTIDYYLD 171
++ + FNG L D A I +
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ + G + Y +++ + + D + + + +
Sbjct: 184 GDLKSSFKNVTGYDTYTAGANTYRVDINSGAVTDDAGTDKIYVNAANGQLTTDDAQNNTA 243
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS------------------------- 266
+ A + + T
Sbjct: 244 VDLFKTAKSSAGTAESKAIAGAIKGGKEGDTFDYKGVSFTIDTKNGADGNGTVSTMINGE 303
Query: 267 ----------------GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
+ + + + + + T S N+ V
Sbjct: 304 KVTLTVADITTGAADVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKG 363
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ + K ++ N DA K + ++ ID+
Sbjct: 364 ESKITVNGAEYTANAEGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASIDS 423
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ A +G+I +R + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 ALSKVDAVRSSLGAIQNRFDSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQ 483
Query: 431 LAVQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 AGTSVLAQANQVPQSVLSLLR 504
>gi|38050235|gb|AAR10736.1| phase 1 flagellin [Salmonella enterica]
gi|38050237|gb|AAR10737.1| phase 1 flagellin [Salmonella enterica]
Length = 506
Score = 211 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 74/503 (14%), Positives = 136/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG---------------------------- 151
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 152 -------SFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
V + + T N+K V
Sbjct: 184 TAVTTTAYADNGTTLNVSGLDDAAIKAATGGTVGAPTVTGGAVKFDADNNKYFVTIGGFT 243
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
DV+ + GA A + + AA A
Sbjct: 244 GADVAKNGDYEVNVATDGTVTLAPGATKTTMPAGATTKTEVQELKTTPVAASADAKNALI 303
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
G + + ++ + Y + + T T
Sbjct: 304 AGGVDTADANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDETTGAIKAKTTSYTA 363
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME----------------EMVSFI 368
D G T ++ T ++ + I
Sbjct: 364 ADGTTKTAANQLGGADGKTEVVSIDGKTYNASKAEGHNFKAQPELAEVATKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|125659364|dbj|BAF46882.1| flagellin [Escherichia coli]
Length = 447
Score = 211 bits (535), Expect = 3e-52, Method: Composition-based stats.
Identities = 68/453 (15%), Positives = 131/453 (28%), Gaps = 12/453 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A D + I + S
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGAN---------DGQTISIDLQKIDSSTLGLNGFS 174
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G + I + T L+ +
Sbjct: 175 VSKNAVSVGDAITQLPGETAADAPVTIKFDDSVKTDLKLTDASGLSLHNLKDENGNLTNQ 234
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ AA + + +T
Sbjct: 235 YVVQNGGKSYAATVAANGNVTLNKANVTYSDVANGIDTATQSGQLVQVGADSTGTPKAFV 294
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + D +T + S ++
Sbjct: 295 SVQGKSFGIDDAALKNNTGDATATPPGTSGTTVVAASIHLSTGKNSVDADVTASTEFTGA 354
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 355 STNDPLTLLDKAIASVDKFRSSLGAVQNRLSSAVTNLNNTTTNLSEAQSRIQDADYATEV 414
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 415 SNMSKAQIIQQAGNSVLSKANQVPQQVLSLLQG 447
>gi|168462503|ref|ZP_02696434.1| flagellin [Salmonella enterica subsp. enterica serovar Newport str.
SL317]
gi|38049945|gb|AAR10591.1| phase 1 flagellin [Salmonella enterica]
gi|50830890|gb|AAT81610.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Newport]
gi|195633949|gb|EDX52301.1| flagellin [Salmonella enterica subsp. enterica serovar Newport str.
SL317]
Length = 502
Score = 211 bits (535), Expect = 3e-52, Method: Composition-based stats.
Identities = 78/499 (15%), Positives = 150/499 (30%), Gaps = 50/499 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------------------------- 153
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVSA 183
Query: 154 ------IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
+G +T D + ++T + L ++ K +
Sbjct: 184 TAAMDPKSFTDGTKNLTAPDATAIKAALGNPAATGDSLSATLSFKDGKYYATVAGYTNAA 243
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
+ + ++ A T A A T D + P+ +
Sbjct: 244 DTSKNGKYEVNVDSATGAVTFNAAPTKATVTGDTTVTKVQVNAPVAVSTDVKKALEDGGV 303
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
S + + AA + + + Y + G V T + +
Sbjct: 304 SNADATAAKLVKMSYTDKNGKSIDGGYALEAGGKYYAATYDEGTGKITANVTTYTDSTGV 363
Query: 328 RKDLPK---------------EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
K S + + A E ++ ID +
Sbjct: 364 TKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLAKIDAAL 423
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 AQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAG 483
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 TSVLAQANQVPQNVLSLLR 502
>gi|38049792|gb|AAR10515.1| phase 2 flagellin [Salmonella enterica]
Length = 501
Score = 211 bits (535), Expect = 3e-52, Method: Composition-based stats.
Identities = 72/498 (14%), Positives = 141/498 (28%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I + +D + + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQISSKTLGLDSLNVQKAYDVSA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + Y + ++ + +T FK +A
Sbjct: 184 TDVISSTYSDGTQALTAPTATEIKAALGNPTVTGDTLTATVSFKDGKYYATVGGYTDAGD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT------- 292
G + V + T S + +D +
Sbjct: 244 TAKNGKYEVTVDSATGAVSFGATPTKSTVTGDTAVTKVQVNAPVAADAATKKALQDGGVS 303
Query: 293 ---------------------------------------TKNSITSDPGYTNSTVAKVGN 313
+ + T+ T A
Sbjct: 304 SADASAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTT 363
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ S + + A E + ID +
Sbjct: 364 KTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|308054841|gb|ADO01467.1| flagellin [Salmonella enterica subsp. enterica]
Length = 506
Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats.
Identities = 79/503 (15%), Positives = 143/503 (28%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG--------SFIRDDNGKVQITTIDYYLD 171
++ + FNG L D + A + + + D
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ +GT + IK A + T G
Sbjct: 184 TAVTTKAYADNGTTLDVSGLTDAAIKTATGGTTGTAAVTGGAVKFDADNNKYFVTIGGFT 243
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
A D +AT AA A T + +K+ T +
Sbjct: 244 GADAAKNGDYEVNVATDGTVTLAAGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALI 303
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
T G ++ ++ K + D + T +
Sbjct: 304 AGGVDATDANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 352 TDAYN-------------------------------------------EKLAMEEMVSFI 368
D E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKPKSLLSTVKPTMPAKPTGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|38049943|gb|AAR10590.1| phase 1 flagellin [Salmonella enterica]
Length = 502
Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats.
Identities = 78/499 (15%), Positives = 151/499 (30%), Gaps = 50/499 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------------------------- 153
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVSA 183
Query: 154 ------IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
+G +T D + ++T + L ++ K +
Sbjct: 184 TDAMDPKSFTDGTKNLTAPDATAIKAALGNPTATGDSLSATLSFKDGKYYATVAGYTNAA 243
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
+ + ++ A T A A T D + P+ +
Sbjct: 244 DTSKNGKYEVNVDSATGAVTFNAAPTKATVTGDTTVTKVQVNAPVAVSTDVKKALEDGGV 303
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
S + + AA + + + Y + G V T + + +
Sbjct: 304 SNADATAAKLVKMSYTDKNGKSIDGGYALEAGGKYYAATYDEGTGKITANVTTYTDSTGA 363
Query: 328 RKDLPK---------------EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
K S + + A E ++ ID +
Sbjct: 364 TKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLAKIDAAL 423
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 AQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAG 483
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 TSVLAQANQVPQNVLSLLR 502
>gi|167552813|ref|ZP_02346564.1| flagellin [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205322657|gb|EDZ10496.1| flagellin [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
Length = 502
Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats.
Identities = 78/499 (15%), Positives = 151/499 (30%), Gaps = 50/499 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------------------------- 153
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVSA 183
Query: 154 ------IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
+G +T D + ++T + L ++ K +
Sbjct: 184 TDAMDPKSFTDGTKNLTAPDATAIKAALGNPATTGDSLSATLSFKDGKYYATVAGYTNAA 243
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
+ + ++ A T A A T D + P+ +
Sbjct: 244 DTSKNGKYEVNVDSATGAVTFNAAPTKATVTGDTTVTKVQVNAPVAVSTDVKKALEDGGV 303
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
S + + AA + + + Y + G V T + + +
Sbjct: 304 SNADATAAKLVKMSYTDKNGKSIDGGYALEAGGKYYAATYDEGTGKITANVTTYTDSTGA 363
Query: 328 RKDLPK---------------EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
K S + + A E ++ ID +
Sbjct: 364 TKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLAKIDAAL 423
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 AQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAG 483
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 TSVLAQANQVPQNVLSLLR 502
>gi|882133|gb|AAC43348.1| phase-2 flagellin structural protein [Salmonella enterica]
Length = 506
Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats.
Identities = 70/503 (13%), Positives = 140/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF----------------IRDDNGKVQI 163
++ + FNG L D + A V+
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
T + + ++ + + + + ++ +
Sbjct: 184 TAVTTKTYADNGTTLDASGLDDTAIKAAIGGTLSTASVTGGTVKFDADNNKYFVTIGGYT 243
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
A + N D +A A T +P+V ++ +
Sbjct: 244 GADATKNGDYEVNVATDGKVTLAPGATKTTIPAGATTKTEVQELKDTPTVVSADAKNALI 303
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ + + G + D + S
Sbjct: 304 AGGVDATDANGAELVKMSYTDKNGKTIDGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 344 LNITRHANTDAY-----------------------------------NEKLAMEEMVSFI 368
+ T + E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAADKTTENPMQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G+I +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DDALAQVDALRSDLGAIQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|308054749|gb|ADO01421.1| flagellin [Salmonella enterica subsp. arizonae]
Length = 504
Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats.
Identities = 72/501 (14%), Positives = 140/501 (27%), Gaps = 52/501 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q S++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN--------GKVQITTIDYYLD 171
++ + FNG L D A I +
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ + G + Y +++ + + D + + + +
Sbjct: 184 GDLKSSFKNVTGYDTYTAGANTYRVDINSGAVTDDAGTDKIYVNAANGQLTTDDAQNNTA 243
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS------------------------- 266
+ T A + + T
Sbjct: 244 VDLFKTTKSSAGTAESKAIAGAIKGGKEGDTFDYKGVSFTIDTKNGADGNGTVSTMINGE 303
Query: 267 ----------------GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
+ + + + + + T S N+ V
Sbjct: 304 KVTLTVADITAGAADVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKG 363
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ + K ++ N DA K + ++ ID+
Sbjct: 364 ESKITVNGAEYTANAEGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASIDS 423
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ A +G+I +R + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 ALSKVDAVRSSLGAIQNRFDSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQ 483
Query: 431 LAVQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 AGTSVLAQANQVPQYVLSLLR 504
>gi|38050243|gb|AAR10740.1| phase 1 flagellin [Salmonella enterica]
Length = 506
Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats.
Identities = 73/503 (14%), Positives = 136/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIA--------------------------------- 146
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 147 --------KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ I + +
Sbjct: 184 TAVTTKAYADNGTTLDASGLDDTAIKAAIGGTLGTASVTGGAVKFDADNNKYFVTIGGYT 243
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
K+ D V A+ T T+ + K +
Sbjct: 244 GADATKNGDYEVNVATDGKVTLAAGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALI 303
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
T + + V S T + + + + K T Y
Sbjct: 304 AGGVDTTDANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDETTGAIKAKTTSYTA 363
Query: 319 DTESTTLDSRKDLP----------KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
D +T + + S + + A E + I
Sbjct: 364 DDGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|531889|gb|AAA64387.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Enteritidis]
gi|1095298|prf||2108321A flagellin
Length = 493
Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats.
Identities = 72/492 (14%), Positives = 137/492 (27%), Gaps = 53/492 (10%)
Query: 13 ASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSS 72
L +L +R+SSGLR++ A D+AA +IA S+ L+ S G S
Sbjct: 2 TQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGIS 61
Query: 73 KVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFN 129
+ +++ + + ++ SIQ EI Q ++ ++ + FN
Sbjct: 62 IAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFN 121
Query: 130 GENWLRTDL----------------------------------GSSTASIAKSVIGSFIR 155
G L D G A++
Sbjct: 122 GVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNV 181
Query: 156 DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASG 215
Y +D + + + ++ + N ++ +
Sbjct: 182 TGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAENNTAVDLFKTTKS 241
Query: 216 TISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG----------- 264
T T + K + K + + +TT
Sbjct: 242 TAGTAEAKAIRGAIKGGKEGDTFDYKGVTFTIDTKTGDDGNGKVSTTINGEKVTLTVADI 301
Query: 265 -----TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + + + + T S N+ V
Sbjct: 302 ATGATDVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKGESKITVNGA 361
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ K ++ N DA K + ++ ID+ + A
Sbjct: 362 EYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVR 421
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G+I +R + + R+ DAD A+E + +S Q QQ L+
Sbjct: 422 SSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQQAGTSVLAQA 481
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 482 NQVPQNVLSLLR 493
>gi|308054729|gb|ADO01411.1| flagellin [Salmonella enterica subsp. salamae]
Length = 506
Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats.
Identities = 70/503 (13%), Positives = 137/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF----------------IRDDNGKVQI 163
++ + FNG L D + A V+
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
T + + + + + + + ++ F
Sbjct: 184 TAVTTTAYADNGTTLNVSGLDDAAIKAATGGTTGAPTVTGGAVKFDADNNKYFVTIGGFT 243
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
A + N D A A T +P A++ +
Sbjct: 244 GADLAKNGDYEVNVATDGTVTFAPGATKTTMPAGATTKTEVQELKTTPVAASADAKNALI 303
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ + + G + D + S
Sbjct: 304 AGGVDTADANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDETTGAIKAKTTSYTA 363
Query: 344 LNITRHANTDAY-----------------------------------NEKLAMEEMVSFI 368
+ T + E + I
Sbjct: 364 ADGTTKTALNQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|323968340|gb|EGB63747.1| flagellin [Escherichia coli M863]
gi|327253054|gb|EGE64708.1| flagellin [Escherichia coli STEC_7v]
Length = 443
Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats.
Identities = 77/453 (16%), Positives = 142/453 (31%), Gaps = 16/453 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ L
Sbjct: 124 DRVSGQTQFNGVNVLSKDGSMKIQVGANDGQTISIDLKKI-------------DSSTLGL 170
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + L N + + + + KL + + L N
Sbjct: 171 NGFSVSKNSLNVSNAITSIPQDAGDKPVDVNFGTTTESAAIAAKLGVSDTSSLSLHNILD 230
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
K A V A + + + ++ + G D
Sbjct: 231 KDGKATADYVVQSGKDFYAASVDAASGKVTLNTINVTYDDYANGVDDAKQTGQLIKVSAD 290
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G V G + D + L + + N E
Sbjct: 291 KDGAAQGFVTLQGKNYSAGDAAVILKNGATSLELTDLNLSDVTDTNGKVTTTATEQFEGA 350
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ E+ ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 351 STEDPLALLDKAIASVDKFRSSLGAVQNRLDSAITNLNNTTTNLSEAQSRIQDADYATEV 410
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 411 SNMSKAQIIQQAGNSVLSKANQVPQQVLSLLQG 443
>gi|882139|gb|AAC43351.1| phase-2 flagellin structural protein [Salmonella enterica]
gi|308054829|gb|ADO01461.1| flagellin [Salmonella enterica subsp. enterica]
Length = 506
Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats.
Identities = 75/503 (14%), Positives = 143/503 (28%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ----------------- 162
++ + FNG L D + A I Q
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 163 --------------------ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
T + T G ++ + + + +
Sbjct: 184 TAVTTKTYANNGTTLDVSGLDDAAIKAAIGGTTGTPAVTGGAVKFDADNNKYFVSIGGYT 243
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
D + + K LAT + A AT + +A A
Sbjct: 244 GADASKNGDYEVNVAADGKVTLATGATKTTIPAGATTKTEVQELKDTPTVVSADAKNALI 303
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+G + + A + + + A +
Sbjct: 304 AGGVDATDANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 323 TTLDSRKDLP--------------KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
++ S + + A E + I
Sbjct: 364 ADGATKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|46395287|dbj|BAD16577.1| phase II flagellin [Salmonella enterica subsp. enterica serovar
Typhi]
Length = 488
Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats.
Identities = 81/485 (16%), Positives = 155/485 (31%), Gaps = 36/485 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ ++
Sbjct: 64 ASRDANDGISVAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLSSIQAEITQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG---------------------------- 151
++ + FNG L + A
Sbjct: 124 DRVSDQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNINGATKATA 183
Query: 152 -----SFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
F + Y ++ E+ + +ST + +D + + +VL
Sbjct: 184 SDLVSKFKATGTDNYDVAGNTYTVNIESGAVQNSTGNSMYISAVDGSLTTSNDTKVLGQG 243
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ A+ + T G K +A G + + ++ T+
Sbjct: 244 VDATALAAAGQGKAQDATFTLKGIEYKVTSAATTNGNGTYEATINNEKVVFTISGSTATT 303
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
G+ + Y + + + K + SD N + + +
Sbjct: 304 GTAASLATDKPIYKTAAGTLTTEQVSNKAATVSDLDIKNGKKTGSSLVVDGQNYKVSKDG 363
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
D N DA + E+ + ID + A +G++
Sbjct: 364 VVTDAVDNKVMYVGKSQGGSPILVNADAAKTMQSTEKPLETIDKALAKVDALRSDLGAVQ 423
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + + + R+ D+D A+E + +S Q QQ L+ N +T +
Sbjct: 424 NRFDSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQTTQNV 483
Query: 447 LSLFR 451
LSL R
Sbjct: 484 LSLLR 488
>gi|320354255|ref|YP_004195594.1| flagellin domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320122757|gb|ADW18303.1| flagellin domain protein [Desulfobulbus propionicus DSM 2032]
Length = 496
Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats.
Identities = 72/494 (14%), Positives = 159/494 (32%), Gaps = 43/494 (8%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I TN ++++A + L +L +R+SSGLR++ A D+AA +I+ M S L+
Sbjct: 3 LTINTNVASLNAQRNLSRSQGDLATSMERLSSGLRINSAKDDAAGLAISDRMTSQIRGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
+ G S A+ M ++ +++ ++ D ++Q+E+ QL+++
Sbjct: 63 QATRNANDGISLAQTAEGAMQESTNILQRMRELAVQAANATNSAADRSALQAEVNQLKTE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF------------IRDDNGKVQITTI 166
+ IA ++FNG L S + + + R + + T
Sbjct: 123 MNRIANSTTFNGLKILDGSFVSQQFQVGPNPNETIGFSIKSMAADDLGRYYHNAINTTAN 182
Query: 167 DYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
T T L + ++ + AS ++ T
Sbjct: 183 QGAGSSTAANATPPTTNTIAAQTLTITGSKGTDNLIIGAGATAWEIASQVTNSASKTGVT 242
Query: 227 TSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD 286
+ + TI A + T+ + + + + +
Sbjct: 243 ATARTEVTLDGLSASGVVNLTIGSGGNIATVNASVTTTDMSELATVINDQSGTTGVTATV 302
Query: 287 IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI 346
+ T + D +N + + T ++ + +
Sbjct: 303 DAGKLTLVQAEGKDIQISNFSHSTASATIKATAADNNAETLTSGGTDSTRVSGVIEFSSQ 362
Query: 347 TRH----------------------------ANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ ++ + + +D + A
Sbjct: 363 DSYTLSSNVGVAAGSILSTAANATVIASFEEVTAIDISDVEGANDALKIVDAALGKIDAQ 422
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
G +G+I +R ++ + + + R+ DAD+A E++ ++ QQ V L+
Sbjct: 423 RGDLGAIQNRFEATIANLQNVSENLTAARSRIRDADIAQETSEMTKNNILQQAGVAILTQ 482
Query: 439 VNNSTARILSLFRG 452
N + L L +G
Sbjct: 483 ANQTPQLALQLLQG 496
>gi|38049808|gb|AAR10523.1| phase 2 flagellin [Salmonella enterica]
Length = 501
Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats.
Identities = 73/498 (14%), Positives = 142/498 (28%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVSA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + Y + + + +T FK +
Sbjct: 184 TDVISSTYSDGTKALTAPTATDIKAALGNPTVTGDTLTATVSFKDGKYYATVGGYTDTGD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + V + T S + +D + ++ S
Sbjct: 244 AAKNGKYEVTVDSATGAVSFGATPTKSTVTGDTAVTKVQVNAPVAADATTKKALQDGGVS 303
Query: 300 DPGYTNSTVAKVGNT--------------------------------------------- 314
+T+ K+ T
Sbjct: 304 STDANAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDETTGAIKAKTTSYTAADGTT 363
Query: 315 -HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ S + + A E + ID +
Sbjct: 364 KTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|331677808|ref|ZP_08378483.1| bacterial flagellin N-terminus subfamily [Escherichia coli H591]
gi|331074268|gb|EGI45588.1| bacterial flagellin N-terminus subfamily [Escherichia coli H591]
Length = 443
Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats.
Identities = 77/453 (16%), Positives = 143/453 (31%), Gaps = 16/453 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ L
Sbjct: 124 DRVSGQTQFNGVNVLSKDGSMKIQVGANDGQTISIDLKKI-------------DSSTLGL 170
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + L N + + + + + KL + + L N
Sbjct: 171 NGFSVSKNSLNVSNAITSIPQAAGNEPVDVNFGDTDESAAIAAKLGVSDTSSLSLHNILD 230
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
K A V A + + + ++ + G D
Sbjct: 231 KDGKATADYVVQSGKDFYAASVNAASGKVTLNTIDVTYDDYANGVDDAKQTGQLIKVSAD 290
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G V G + D + L + + N E
Sbjct: 291 KDGTAQGFVTLQGKNYSAGDAADILKNGATALELTDLNLSDVTDTNGKVTTTATEQFEGA 350
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ E+ ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 351 STEDPLALLDKAIASVDKFRSSLGAVQNRLDSAITNLNNTTTNLSEAQSRIQDADYATEV 410
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 411 SNMSKAQIIQQAGNSVLSKANQVPQQVLSLLQG 443
>gi|194444631|ref|YP_002041222.1| flagellin [Salmonella enterica subsp. enterica serovar Newport str.
SL254]
gi|197262038|ref|ZP_03162112.1| flagellin [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|38049941|gb|AAR10589.1| phase 1 flagellin [Salmonella enterica]
gi|50830892|gb|AAT81611.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Saintpaul]
gi|194403294|gb|ACF63516.1| flagellin [Salmonella enterica subsp. enterica serovar Newport str.
SL254]
gi|197240293|gb|EDY22913.1| flagellin [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
Length = 502
Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats.
Identities = 78/499 (15%), Positives = 151/499 (30%), Gaps = 50/499 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------------------------- 153
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVSA 183
Query: 154 ------IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
+G +T D + ++T + L ++ K +
Sbjct: 184 TAAMDPKSFTDGTKNLTAPDATAIKAALGNPAATGDSLSATLSFKDGKYYATVAGYTNAA 243
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
+ + ++ A T A A T D + P+ +
Sbjct: 244 DTSKNGKYEVNVDSATGAVTFNAAPTKATVTGDTTVTKVQVNAPVAVSTDVKKALEDGGV 303
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
S + + AA + + + Y + G V T + + +
Sbjct: 304 SNADATAAKLVKMSYTDKNGKSIDGGYALEAGGKYYAATYDEGTGKITANVTTYTDSTGA 363
Query: 328 RKDLPK---------------EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
K S + + A E ++ ID +
Sbjct: 364 TKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLAKIDAAL 423
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 AQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAG 483
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 TSVLAQANQVPQNVLSLLR 502
>gi|308054849|gb|ADO01471.1| flagellin [Salmonella enterica subsp. enterica]
Length = 503
Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats.
Identities = 69/500 (13%), Positives = 138/500 (27%), Gaps = 51/500 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVSA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + Y + ++ + +T FK +A
Sbjct: 184 TDVISSTYSDGTQALTAPTATEIKAALGNPTVTGDTLTATVSFKDGKYYATVGGYTDAGD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + V + T S +
Sbjct: 244 TAKNGKYEVTVDSATGAVSFGATPTKSTVTGDTAVTKVQVNAPVPVAADAATKKALQDGG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
S V ++ + ++ + + + T
Sbjct: 304 VSSADASAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADG 363
Query: 360 AMEEM------------------------------------------------VSFIDTQ 371
+ + ID
Sbjct: 364 TTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAA 423
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 LAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQA 483
Query: 432 AVQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 GTSVLAQANQVPQNVLSLLR 503
>gi|308054727|gb|ADO01410.1| flagellin [Salmonella enterica subsp. salamae]
Length = 506
Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats.
Identities = 70/503 (13%), Positives = 138/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF----------------IRDDNGKVQI 163
++ + FNG L D + A V+
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
T + + + + + + + ++ F
Sbjct: 184 TAVTTTAYADNGTTLNVSGLDDAAIKAATGGTTGAPTVTGGAVKFDADNNKYFVTIGGFT 243
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
A + N D +A A T +P A++ +
Sbjct: 244 GADLAKNGDYEVNVATDGTVTLAPGATKTTMPAGATTKTEVQELKTTPVAASADAKNALI 303
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ + + G + D + S
Sbjct: 304 AGGVDTADANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDETTGAIKAKTTSYTA 363
Query: 344 LNITRHANTDAY-----------------------------------NEKLAMEEMVSFI 368
+ T + E + I
Sbjct: 364 DDGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|293395613|ref|ZP_06639896.1| flagellar filament structural protein [Serratia odorifera DSM 4582]
gi|291421932|gb|EFE95178.1| flagellar filament structural protein [Serratia odorifera DSM 4582]
Length = 422
Score = 210 bits (533), Expect = 5e-52, Method: Composition-based stats.
Identities = 65/452 (14%), Positives = 136/452 (30%), Gaps = 36/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L +L +R+SSGLR++ A D+AA +I+ ++ L+
Sbjct: 4 VINTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ D + I+ S +SIQ EI+Q S++
Sbjct: 64 ASRNANDGISLAQTTEGALNEVNDNLQNIRRLTVQSQNGSNSSSDLQSIQDEISQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FNG L +D + A I + + ++ + + +
Sbjct: 124 NRISEQTDFNGVKVLSSDQKLTIQVGANDNETIDIELKDINAKTLGLEKFSVADALDTTK 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
I + + + + +
Sbjct: 184 VGTTALTAIDKMAAPTIAADTNTAAPKTSTDGKVYSDGTNSYIQTGASEW---------- 233
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ T + + + A + +
Sbjct: 234 -----------VKGSVSGTGEFTFDSGTAANVVATKPAGLTETSQVKVGSTTVSGLGTGE 282
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ K G D + + + + +
Sbjct: 283 ELRSYTDPAGKAGYVVKGKDADGNDAFFKASVDATGKVTKGAQQ------------STEP 330
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D + + +G++ +R + + + + R+ DAD A+E
Sbjct: 331 KTADPLATLDKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEV 390
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S QQ L+ N ST +LSL R
Sbjct: 391 SNMSRANILQQAGTSVLAQANQSTQNVLSLLR 422
>gi|295097213|emb|CBK86303.1| Flagellin and related hook-associated proteins [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 494
Score = 210 bits (533), Expect = 5e-52, Method: Composition-based stats.
Identities = 71/491 (14%), Positives = 131/491 (26%), Gaps = 42/491 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L +L R+SSGLR++ A D+AA +I+ S L+
Sbjct: 4 VINTNALSLMAQNNLNKSQTSLGTAIQRLSSGLRINSAKDDAAGMAISNRFTSSIRGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + + + + + I+ D SI+ EI+ ++
Sbjct: 64 AARNANDGISLAQTTEGALEEVTENLQRIRELTVQAKNGTNSSDDRDSIKKEISARLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRD----------------------- 156
+ I+ ++FNG N L T I + D
Sbjct: 124 KRISETTNFNGVNVLDGSKDKLTIQIGDKDGQTIDIDLKKLDIDSLGLDGFTAAFDKIAG 183
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
G T STD I+
Sbjct: 184 SAGATSQYTKAATAKAAGDDTGISTDAGNWKVDAADITAIETAVGAAAGDVELYVADGEA 243
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ K I VP A + + +++ +
Sbjct: 244 FAYDKTADKMFKLDTSAITFKDDGAGNAIIDGAVPAGAVTEVNALDADILLNGPSTLSDA 303
Query: 277 ATYIRMGNSDIWVRATTKNSITS----------------DPGYTNSTVAKVGNTHYYVDT 320
+ + +
Sbjct: 304 TKLKEGATFKAQDGSEVTLDQAKLDEISNAAFGADAADSNMQLFSVKDGANTKYFAQSTD 363
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
S ++ + + ++ A + A ++++ +D + T
Sbjct: 364 ASGNTVVKELTFADNATAPTVADAGAANSAFINTAANAAAADDLLGNLDAALTEVTNFQA 423
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
+G+I +R + + R+ DAD + E + +S QQ V LS N
Sbjct: 424 DLGAIQNRFSSIIANLNTTVINTTEARSRIQDADFSVEVSAMSRSNILQQAGVSVLSQAN 483
Query: 441 NSTARILSLFR 451
+LSL R
Sbjct: 484 QVPQNVLSLLR 494
>gi|30059928|gb|AAP13336.1| FliC [Escherichia coli]
Length = 447
Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats.
Identities = 79/453 (17%), Positives = 140/453 (30%), Gaps = 12/453 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D + + + D T L
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMK-IQVGANDGQTISIDLQKIDSSTLGLKGFSVSGNALKV 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S T G + + V+ ++ G T L A KA
Sbjct: 183 SDAITTVPGANAGDAPVTVKFGANDTAAAAMAKTLGISDTSGLSLHNVQSADGKATGTYV 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
Q+ NTT+ T + V + + +T
Sbjct: 243 VQSGNDFYSASVNAGGVVTLNTTNVTFTDPANGVTTATQTGQPIKVTTNSAGAAVGYVTI 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ D + + + G T
Sbjct: 303 QGKDYLAGADGKDAIENGGDAATNEDTKIQLTDELDVDGSVKTAATATFSGT-------- 354
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 355 ATNDPLALLDKAISQVDTFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEV 414
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 415 SNMSKAQIIQQAGNSVLSKANQVPQQVLSLLQG 447
>gi|238916369|ref|YP_002929886.1| flagellin [Eubacterium eligens ATCC 27750]
gi|238871729|gb|ACR71439.1| flagellin [Eubacterium eligens ATCC 27750]
Length = 497
Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats.
Identities = 80/496 (16%), Positives = 167/496 (33%), Gaps = 47/496 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N +AM+A++ L ++ +++SSG R++ AAD+AA SI++ M+S L+
Sbjct: 2 VVQHNMAAMNANRMLSGVSSAQSKSTEKLSSGYRINRAADDAAGLSISEKMRSQIRGLNK 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
SD G S + A+ ++++ ++ ++ D +++Q+EI QLQS+L
Sbjct: 62 ASDNAQDGISLIQTAEGALNESHSILQRMRELSVQAANGTETDDDREAVQNEIEQLQSEL 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FN L S + S + ++ L +S
Sbjct: 122 TRISDTTEFNTMKLLDGSQSGSKVQASVSKSADAMLTTEPATTGKSVSAALTNTADGTES 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ T + + + + T + A
Sbjct: 182 TYAVTVMDKDGNASTTTVKFTAGADEEADANAIIKALKDTDLADKFDMTYATGDKTITFT 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ +G+++ V A + T G+ + S + G+ +I T N
Sbjct: 242 SKEEGVSSNVVLTQLGTAKAAAATVTPGTDAYSKLSKDYAAYDGSGNIEDAIFTVNGQKF 301
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSR------------------------------- 328
+ + Y++T + T+D
Sbjct: 302 AYVTDATKLGDDYKDVNYIETAAATIDPAEAAKMAKLINSKTGISAEADKNGNISLKAGS 361
Query: 329 -------------KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ + M + +++ + + ID IK
Sbjct: 362 SNTGKGIELQIGANEGQTMSFTLDDMSADALGVGVGKVDLSKQETAKTATTTIDAAIKKI 421
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ A G++G++ +R+ + + + ++ R+ D DMA E S Q
Sbjct: 422 SKARGQMGAVQNRLEHTINNLDTASENMQTAESRIRDTDMAEEMVNYSKNNILAQAGQSM 481
Query: 436 LSIVNNSTARILSLFR 451
L+ N S +L+L +
Sbjct: 482 LAQANQSNQGVLTLLQ 497
>gi|323174561|gb|EFZ60182.1| flagellin [Escherichia coli LT-68]
Length = 443
Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats.
Identities = 77/453 (16%), Positives = 142/453 (31%), Gaps = 16/453 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ L
Sbjct: 124 DRVSGQTQFNGVNVLSKDGSMKIQVGANDGQTISIDLKKI-------------DSSTLGL 170
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + L N + + + + + KL + + L N
Sbjct: 171 NGFSVSKNSLNVSNAITSIPQAASNEPVDVNFGDTDESAAIAAKLGVSDTSSLSLHNILD 230
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
K A V A + + ++ + G D
Sbjct: 231 KDGKATADYVVQSGKDFYAASVNAALGKVTLNTIDVTYDDYANGVDDAKQTGQLIKVSAD 290
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G V G + D + L + + N E
Sbjct: 291 KDGAAQGFVTLQGKNYSAGDAADILKNGATALKLTDLNLSDVTDTNGKVTTTATEQFEGA 350
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ E+ ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 351 STEDPLALLDKAIASVDKFRSSLGAVQNRLDSAITNLNNTTTNLSEAQSRIQDADYATEV 410
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 411 SNMSKAQIIQQAGNSVLSKANQVPQQVLSLLQG 443
>gi|1706828|sp|P53606|FLA_LEGMI RecName: Full=Flagellin
gi|673428|emb|CAA59172.1| flagellin [Tatlockia micdadei]
Length = 474
Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats.
Identities = 71/470 (15%), Positives = 147/470 (31%), Gaps = 22/470 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L ++ R+SSGLR++ A D+AA +I++ M + +
Sbjct: 4 VINTNVMSLNAQRNLNASQKMMQTAIQRLSSGLRINSAKDDAAGMAISEAMTAQIRGMDQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
G S A+ M + +++ ++ + ++IQ EITQLQ++L
Sbjct: 64 AIRNANDGISLSQTAEGAMQETTNILQRMRELALQSANSTNNSDDRQAIQQEITQLQAEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
A+ + FNG+ L +++ + + + + T + +
Sbjct: 124 DRNAQNTQFNGQRVLDGSFQNASFQVGANANQTITFSIGSIMSSAIGGIASQTGTAVSGA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ I + ++ + T
Sbjct: 184 AATDITISLGGGAPISINSSAGFVGPDASQDATSAYAKAAAINGAGIAGLQVTAVTAGTQ 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
T + T S + S I +S V AT +
Sbjct: 244 TVGPIGGTAGDTYNLTINGVAVFTNTELSTALSNTQLRDGINSVSSQTGVLATLNGGDIT 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTL-------------------DSRKDLPKEIDSGYS 340
++ + + +S G S
Sbjct: 304 LTASDGRNISVTESGTGFTAGTDGLTVTAGPFAATLRGNLTISAINSIAIGGTVATLGLS 363
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T N+ + + ID+ + + +G++ +R L ++ +
Sbjct: 364 AAIAKDTLGVNSIDVTTTAGAQAALLRIDSALTSVNSNRAAMGALQNRFDLTIANLQNVE 423
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + R+ DAD A+E++ L+ Q QQ L+ N+ +L L
Sbjct: 424 ENLSAARSRIQDADFAAETSNLTKGQILQQAGTAMLAQANSLPQSVLKLL 473
>gi|89143092|emb|CAI29258.1| flagellin [Escherichia coli]
Length = 448
Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats.
Identities = 75/456 (16%), Positives = 140/456 (30%), Gaps = 17/456 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSESDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + A IT +D +T+ LD
Sbjct: 124 DRVSGQTQFNGVNVLAKNGSMKIQVGAN-----------DNQTITIDLKQIDAKTLGLDG 172
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + ++ + + +
Sbjct: 173 FSVKNNDTVTTSAPVTAFGATTTNNIKLTGITLSTEAATDTGGTNPASIEGVYTDNGNDY 232
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
I A A + + + + V TT
Sbjct: 233 YAKVQIDNTAGSATANLGAVSLVKLQDSKGNDTDTYALKDTNGNLYAADVNETTGAVSVK 292
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
YT+S+ A T + + + K DS T +
Sbjct: 293 TITYTDSSGAASSPTAVKLGGDDGKTEVVDIDGKTYDSADLNGGNLQTGLTAGGEALTAV 352
Query: 360 AM---EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
A + + +D I +G++ +R+ + + + R+ DAD A
Sbjct: 353 ANGKTTDPLKALDDAIASVDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYA 412
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+E + +S Q QQ L+ N ++LSL +G
Sbjct: 413 TEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 448
>gi|38050241|gb|AAR10739.1| phase 1 flagellin [Salmonella enterica]
Length = 506
Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats.
Identities = 71/503 (14%), Positives = 138/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF----------------IRDDNGKVQI 163
++ + FNG L D + A V+
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
T + + + + + + + ++ F
Sbjct: 184 TAVTTTAYADNGTTLNVSGLDDAAIKAATGGTTGAPTVTGGAVKFDADNNKYFVTIGGFT 243
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
A + N D +A A T +P A++ +
Sbjct: 244 GADLAKNGDYEVNVATDGTVTLAPGATKTTMPAGATTKTEVQELKTTPVAASADAKNALI 303
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ + + G + D + S
Sbjct: 304 AGGVDTADANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDETTGAIKAKTTSYTA 363
Query: 344 LNITRHANTDAY-----------------------------------NEKLAMEEMVSFI 368
+ T + E + I
Sbjct: 364 DDGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAVGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + I + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNIGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|50830888|gb|AAT81609.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Anatum]
Length = 502
Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats.
Identities = 79/499 (15%), Positives = 151/499 (30%), Gaps = 50/499 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------------------------- 153
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVSA 183
Query: 154 ------IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
NG +T D + ++T + L ++ K +
Sbjct: 184 TAAMDPKSFTNGTKNLTAPDATAIKAALGNPTATGDSLSATLSFKDGKYYATVAGYTNTA 243
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
+ + ++ A T A A T D + P+ +
Sbjct: 244 DTSKNGKYEVNVDSATGAVTFNAAPTKATVTGDTTVTKVQVNAPVAVSTDVKKALEDGGV 303
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
S + + AA + + + Y + G V T + + +
Sbjct: 304 SNADATAAKLVKMSYTDKNGKSIDGGYALEAGGKYYAATYDEGTGKITANVTTYTDSTGA 363
Query: 328 RKDLPK---------------EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
K S + + A E ++ ID +
Sbjct: 364 TKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLAKIDAAL 423
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 AQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAG 483
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 TSVLAQANQVPQNVLSLLR 502
>gi|38049804|gb|AAR10521.1| phase 2 flagellin [Salmonella enterica]
Length = 501
Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats.
Identities = 71/498 (14%), Positives = 138/498 (27%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVSA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + Y + + + +T FK +A
Sbjct: 184 TDVISSTYSDGTKALTAPTATDIKTALGNPTVTGDTLTATVSFKDGKYYATVGGYTDAGD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT------- 292
G + V + T + + +D +
Sbjct: 244 VAKNGKYEVTVDSATGAVSFGATPTKATVTGDTTVTKVQVNAPVAADAATKKALQDGGVS 303
Query: 293 ---------------------------------------TKNSITSDPGYTNSTVAKVGN 313
+ + T+ T A
Sbjct: 304 SADANAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYNETTGAIKAKTTSYTAADGTT 363
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ S + + A E + ID +
Sbjct: 364 KTAANQLGGADGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|38050111|gb|AAR10674.1| phase 1 flagellin [Salmonella enterica]
Length = 493
Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats.
Identities = 78/490 (15%), Positives = 139/490 (28%), Gaps = 41/490 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI------------------------- 154
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 155 ---RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
T ID + T D VY
Sbjct: 184 TAATVTGYTDSATAIDKSTFAASATALGGTPAITGDLKFDDTTGKYYADVSGTTAKDGVY 243
Query: 212 DASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
+ + K T +G +T + A T +G + + +
Sbjct: 244 EVTVAADGKVTLTGTPTGPITGGFPSTATKDVKQTQQENADLTEAKAALTAAGVAAAGTA 303
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
SV + G + A + T Y D ++ K
Sbjct: 304 SVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLG 363
Query: 332 PKE----------IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ S + + A E + ID +
Sbjct: 364 GADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAATTTTENPLQKIDAALAQVDTLRSD 423
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G++ + + + + R+ D+D A+E + +S Q QQ L+ N
Sbjct: 424 LGAVQKPFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQ 483
Query: 442 STARILSLFR 451
+LSL R
Sbjct: 484 VPQNVLSLLR 493
>gi|162382783|ref|YP_894345.2| flagellin [Bacillus thuringiensis str. Al Hakam]
gi|225863618|ref|YP_002748996.1| flagellin [Bacillus cereus 03BB102]
gi|225789463|gb|ACO29680.1| flagellin protein [Bacillus cereus 03BB102]
Length = 451
Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats.
Identities = 71/451 (15%), Positives = 150/451 (33%), Gaps = 5/451 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++ + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 3 INTNINSLRTQEYMRQNQTKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + M+ +++ +++ ++ ++Q E ++LQ Q+
Sbjct: 63 ANNTQDGMSLIRTADSAMNSVSNILLRMRDIANQSANGTNTDSNKSALQKEFSELQKQIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L D ++ S I D V + ++ ++ ++
Sbjct: 123 YIADNTQFNDKNLLNADSEVKIQTLDSSNGDQQIGIDLKAVTL--EKLGINNISIGSATT 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D + ++ + + A I T T +
Sbjct: 181 ADLKQTDIEAVSTKIAALDKDSVAKDITDIKAAIDKIKDGMKPEDVTKLNAALDGFKTGE 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A + A ++ S + + T +
Sbjct: 241 ADDDAAGVTAIKTALSKVELPKGSFEVAQKDLDDVSTKIAALDKDSVAKDITDIKAAIDK 300
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
++ D I + S V L N K
Sbjct: 301 IKDGMKPEDVTKLNAALDGFKTGEADDDAAGVTAIKTALSKVELPKLGDTIKPTTNSKAD 360
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
V+ ID + +G+ +R+ + +K A+ ++ DADMA E +
Sbjct: 361 SLAAVAAIDKALTTVADNRATLGATLNRLDFNVNNLKSQSSAMAASASQIEDADMAKEMS 420
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + + + LS N + + L +
Sbjct: 421 EMTKFKILNEAGISMLSQANQTPQMVSKLLQ 451
>gi|239817135|ref|YP_002946045.1| flagellin [Variovorax paradoxus S110]
gi|239803712|gb|ACS20779.1| flagellin domain protein [Variovorax paradoxus S110]
Length = 412
Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats.
Identities = 72/452 (15%), Positives = 131/452 (28%), Gaps = 46/452 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNASQSSLNTAIQRLSSGLRINSAKDDAAGQAIANRFTANIRGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + + + + + ++ G+D +SIQ EI ++
Sbjct: 64 ASRNANDGISLAQTTEGALKEVNNNLQRVRELSVQAANGSNSGSDLQSIQDEIKLRLGEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+++ + FNG L + T + + + D T + +
Sbjct: 124 DRVSKQTDFNGVKVLSSSAKPLTVQVGANDGETIDIDLKEISSKTLGMQGFNVAGPGATA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G + + + L +V + T A A
Sbjct: 184 AFAFDGVTGSAAGDAPTVAQLKSLYGSTTAVTTTTVAEKTTDDLSTKLGLAAGGATLTGN 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + + P TS R D T + T+
Sbjct: 244 TVADKNGNLFAEVSITPTGAGETSSLINQGFTGAVDGTAMFRYIALDPASADTATTAGTA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
S V+
Sbjct: 304 AFTVDTSKVSVASLQTGSTA---------------------------------------- 323
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ID +K +G++ +R + + R+ DAD A+E
Sbjct: 324 ---SPLEAIDAALKQVDDLRSSLGAVQNRFDSVISNLGTAITNLSSSRSRIEDADYATEV 380
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ Q QQ L+ N +T +LSL R
Sbjct: 381 SNMTRAQILQQAGTSVLAQANQTTQGVLSLLR 412
>gi|38049834|gb|AAR10536.1| phase 2 flagellin [Salmonella enterica]
Length = 501
Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats.
Identities = 73/498 (14%), Positives = 141/498 (28%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVSA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + Y + ++ + +T FK +A
Sbjct: 184 TDVISSTYSDGTQALTAPTATEIKAALGNPTVTGDTLTATVSFKDGKYYATVGGYTDAGD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT------- 292
G + V + T S + +D +
Sbjct: 244 TAKNGKYEVTVDSATGAVSFGATPTKSTVTGDTAVTKVQVNAPVAADAATKKALQDGGVS 303
Query: 293 ---------------------------------------TKNSITSDPGYTNSTVAKVGN 313
+ + T+ T A
Sbjct: 304 SADASAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAVKAKTTSYTAADGTT 363
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ S + + A E + ID +
Sbjct: 364 KTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|38049784|gb|AAR10511.1| phase 2 flagellin [Salmonella enterica]
Length = 506
Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats.
Identities = 70/503 (13%), Positives = 137/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF----------------IRDDNGKVQI 163
++ + FNG L D + A V+
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
T + + + + + ++ F
Sbjct: 184 TAVTTKAYANNGTTLDVSGLDDAAIKAATGGTNGAPSVTGSAVKFDADNNKYFVTIGGFT 243
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
A N D +A A T +P+V ++ +
Sbjct: 244 GADLDKNGDYEVNVATDGTVTLAAGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALI 303
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ + + G + D + S +
Sbjct: 304 AGGVDTADANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYIA 363
Query: 344 LNITRHANTDAY-----------------------------------NEKLAMEEMVSFI 368
+ T + E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|148644995|gb|ABR01029.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Saintpaul]
Length = 502
Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats.
Identities = 79/499 (15%), Positives = 151/499 (30%), Gaps = 50/499 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------------------------- 153
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVSA 183
Query: 154 ------IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
NG +T D + ++T + L ++ K +
Sbjct: 184 TAAMDPKSFTNGTKNLTAPDATAIKAALGNPAATGDSLSATLSFKDGKYYATVAGYTNAA 243
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
+ + ++ A T A A T D + P+ +
Sbjct: 244 DTSKNGKYEVNVDSATGAVTFNAAPTKATVTGDTTVTKVQVNAPVAVSTDVKKALEDGGV 303
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
S + + AA + + + Y + G V T + + +
Sbjct: 304 SNADATAAKLVKMSYTDKNGKSIDGGYALEAGGKYYAATYDEGTGKITANVTTYTDSTGA 363
Query: 328 RKDLPK---------------EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
K S + + A E ++ ID +
Sbjct: 364 TKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLAKIDAAL 423
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 AQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAG 483
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 TSVLAQANQVPQNVLSLLR 502
>gi|308054725|gb|ADO01409.1| flagellin [Salmonella enterica subsp. salamae]
Length = 506
Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats.
Identities = 76/503 (15%), Positives = 139/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG--------SFIRDDNGKVQITTIDYYLD 171
++ + FNG L D + A + + + D
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ +GT + IK A + T G
Sbjct: 184 TAVTTTAYADNGTTLDVSGLTDAAIKTATGGTNGAPTVTGGAVKFDADNNKYFVTIGGFT 243
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
D +AT A A T + +K+ T +
Sbjct: 244 GADLAKNGDYEVNVATDGTVTLAPGATKTTMPAGATTKTEVQELKTTPVAASADAKNALI 303
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
T G ++ ++ K + D + T +
Sbjct: 304 AGGVDTTDANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDETTGAIKAKTTSYTA 363
Query: 352 TDAYN-------------------------------------------EKLAMEEMVSFI 368
D E + I
Sbjct: 364 ADGTTKTAANQLGGADGKTEVVTIDGKTYNASKAAGHDFKAQPELAEVATKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|168238678|ref|ZP_02663736.1| flagellin [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194735300|ref|YP_002115724.1| flagellin [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|38049778|gb|AAR10508.1| phase 2 flagellin [Salmonella enterica]
gi|38049782|gb|AAR10510.1| phase 2 flagellin [Salmonella enterica]
gi|38049786|gb|AAR10512.1| phase 2 flagellin [Salmonella enterica]
gi|194710802|gb|ACF90023.1| flagellin [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197288536|gb|EDY27913.1| flagellin [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 506
Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats.
Identities = 70/503 (13%), Positives = 136/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF----------------IRDDNGKVQI 163
++ + FNG L D + A V+
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
T + + + + + ++ F
Sbjct: 184 TAVTTKAYANNGTTLDVSGLDDAAIKAATGGTNGAPSVTGSAVKFDADNNKYFVTIGGFT 243
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
A N D +A A T +P+V ++ +
Sbjct: 244 GADLDKNGDYEVNVATDGTVTLAAGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALI 303
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ + + G + D + S
Sbjct: 304 AGGVDATDANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 344 LNITRHANTDAY-----------------------------------NEKLAMEEMVSFI 368
+ T + E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|38049860|gb|AAR10549.1| phase 2 flagellin [Salmonella enterica]
gi|38049862|gb|AAR10550.1| phase 2 flagellin [Salmonella enterica]
gi|38049864|gb|AAR10551.1| phase 2 flagellin [Salmonella enterica]
Length = 499
Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats.
Identities = 74/496 (14%), Positives = 141/496 (28%), Gaps = 47/496 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVDS 183
Query: 180 ST----------------------------------DGTERYGLLDRNHKIKVEPQVLKD 205
+ ++
Sbjct: 184 KAVTGVSTLDTTGLTGTAIKTGVAGATTTTGSIKDDKVYYDSATKNYYAEVNFTDAADTA 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
+ T +TT A A + + I A T
Sbjct: 244 KNGFYKVNVADDGTVTMGASTTKEAAKPAGVVEVTKTQEEKAIKASADVKAALTAGGIDT 303
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL 325
+ + + + + + G + A V T Y ++
Sbjct: 304 ADAATAEMVKMSYTDKNGKTIDGGYAVKVGDNYYAATQKKDGSFSVNTTSYTAADGTSKT 363
Query: 326 DSRKDLPKE----------IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ + S + + A E + ID +
Sbjct: 364 ALNQLGGADGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQV 423
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 DTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSV 483
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 LAQANQVPQNVLSLLR 499
>gi|38050247|gb|AAR10742.1| phase 1 flagellin [Salmonella enterica]
Length = 506
Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats.
Identities = 73/503 (14%), Positives = 136/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIA--------------------------------- 146
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 147 --------KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ I + +
Sbjct: 184 TAVTTKAYADNGTTLDASGLDDTAIKAAIGGTLGTASVTGGAVKFDADNNKYFVTIGGYT 243
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
K+ D V A+ T T+ + K
Sbjct: 244 GADATKNGDYEVDVATDGTVTLAAGATKTTMPAGATTKTEVQELKTTPVAASADAKNALI 303
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
+ + V S T + + + + K T Y
Sbjct: 304 AGGVDTADANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 319 DTESTTLDSRKDLP----------KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
D +T + + S + + A E + I
Sbjct: 364 DDGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|882135|gb|AAC43349.1| phase-2 flagellin structural protein [Salmonella enterica]
gi|38049780|gb|AAR10509.1| phase 2 flagellin [Salmonella enterica]
Length = 506
Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats.
Identities = 70/503 (13%), Positives = 136/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF----------------IRDDNGKVQI 163
++ + FNG L D + A V+
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
T + + + + + ++ F
Sbjct: 184 TAVTTKAYANNGTTLDVSGLDDAAIKAATGGTNGAPSVTGSAVKFDADNNKYFVTIGGFT 243
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
A N D +A A T +P+V ++ +
Sbjct: 244 GADLDKNGDYEVNVATDGTVTLAAGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALI 303
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ + + G + D + S
Sbjct: 304 AGGVDTADANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 344 LNITRHANTDAY-----------------------------------NEKLAMEEMVSFI 368
+ T + E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|38050245|gb|AAR10741.1| phase 1 flagellin [Salmonella enterica]
Length = 506
Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats.
Identities = 75/503 (14%), Positives = 140/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV------------------ 161
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 162 -------------------------------QITTIDYYLDPETVLLDSSTDGTERYGLL 190
+ T D++ G
Sbjct: 184 TAVTTKAYADNGTTLDASGLDDTAIKAAIGGTLGTASVTGGAVKFDADNNKYFVTIGGYT 243
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
+ + +V D +V A G T ATT + + +
Sbjct: 244 GADATKNGDYEVNVATDGTVTLAPGATKTTMPAGATTKTEVQELKTTPVAASADAKNALI 303
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
A N S + + + A + T ++
Sbjct: 304 AGGVDTADANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDETTGAIKAKTTSYTA 363
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN--EKLAMEEMVSFI 368
T + D + ++ Y+ E + I
Sbjct: 364 ADGTTKTAANQLGGADGKTEVVTIDGKTYNASKAEGHNFKAQPELAEVATKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|882141|gb|AAC43352.1| phase-2 flagellin structural protein [Salmonella enterica]
Length = 506
Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats.
Identities = 71/503 (14%), Positives = 138/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF----------------IRDDNGKVQI 163
++ + FNG L D + A V+
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
T + + + P + + ++ F
Sbjct: 184 TAVTTKAYANNGTTLDVSGLDDTAIKAAIGGTTGTAPVTGSAVKFDADNNKYFVTIGGFT 243
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
A + N D +A A T +P+V ++ +
Sbjct: 244 GADAAKNGDYEVNVATDGTVTLAAGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALI 303
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ + + G + D + S
Sbjct: 304 AGGVDATDANGAELVKMSYTDKNGKTIDGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 344 LNITRHANTDAY-----------------------------------NEKLAMEEMVSFI 368
+ T + E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|38049832|gb|AAR10535.1| phase 2 flagellin [Salmonella enterica]
gi|38049836|gb|AAR10537.1| phase 2 flagellin [Salmonella enterica]
gi|38049838|gb|AAR10538.1| phase 2 flagellin [Salmonella enterica]
gi|308054851|gb|ADO01472.1| flagellin [Salmonella enterica subsp. enterica]
Length = 501
Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats.
Identities = 73/498 (14%), Positives = 141/498 (28%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVSA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + Y + ++ + +T FK +A
Sbjct: 184 TDVISSTYSDGTQALTAPTATEIKAALGNPTVTGDTLTATVSFKDGKYYATVGGYTDAGD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT------- 292
G + V + T S + +D +
Sbjct: 244 TAKNGKYEVTVDSATGAVSFGATPTKSTVTGDTAVTKVQVNAPVAADAATKKALQDGGVS 303
Query: 293 ---------------------------------------TKNSITSDPGYTNSTVAKVGN 313
+ + T+ T A
Sbjct: 304 SADASAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTT 363
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ S + + A E + ID +
Sbjct: 364 KTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|331653331|ref|ZP_08354336.1| bacterial flagellin N-terminus subfamily [Escherichia coli M718]
gi|331049429|gb|EGI21501.1| bacterial flagellin N-terminus subfamily [Escherichia coli M718]
Length = 443
Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats.
Identities = 77/453 (16%), Positives = 143/453 (31%), Gaps = 16/453 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ L
Sbjct: 124 DRVSGQTQFNGVNVLSKDGSMKIQVGANDGQTISIDLKKI-------------DSSTLGL 170
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + L N + + + + + KL + + L N
Sbjct: 171 NGFSVSKNSLNVSNAITSIPQAASNEPVDVNFGDTDESAAIAAKLGVSDTSSLSLHNILD 230
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
K A V A + + + ++ + G D
Sbjct: 231 KDGKATADYVVQSGKDFYAASVNAASGKVTLNTIDVTYDDYANGVDDAKQTGQLIKVSAD 290
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G V G + D + L + + N E
Sbjct: 291 KDGAAQGFVTLQGKNYSAGDAADILKNGATALKLTDLNLSDVTDTNGKVTTTATEQFEGA 350
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ E+ ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 351 STEDPLALLDKAIASVDKFRSSLGAVQNRLDSAITNLNNTTTNLSEAQSRIQDADYATEV 410
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 411 SNMSKAQIIQQAGNSVLSKANQVPQQVLSLLQG 443
>gi|30059908|gb|AAP13326.1| FliC [Escherichia coli]
Length = 447
Score = 209 bits (530), Expect = 9e-52, Method: Composition-based stats.
Identities = 68/453 (15%), Positives = 131/453 (28%), Gaps = 12/453 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A D + I + S
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGAN---------DGQTISIDLQKIDSSTLGLNGFS 174
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G + I + T L+ +
Sbjct: 175 VSKNAVSVGDAITQLPGETAADAPVTIKFDDSVKTDLKLTDASGLSLHNLKDENGNLTNQ 234
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ AA + + +T
Sbjct: 235 YVVQNGGKSYAATVAANGNVTLNKANVTYSDVANGIDTATQSGQLVQVGADSTGTPKAFV 294
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + D +T + S ++
Sbjct: 295 SVQGKSFGIDDAALKNNTGDATATQPGTSGTTVVAASIHLSTGKNSVDADVTASTEFTGA 354
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 355 STNDPLTLLDKAIASVDKFRSSLGAVQNRLSSAVTNLNNTTTNLSEAQSRIQDADYATEV 414
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 415 SNMSKAQIIQQAGNSVLSKANQVPQQVLSLLQG 447
>gi|38049716|gb|AAR10477.1| phase 2 flagellin [Salmonella enterica]
Length = 506
Score = 209 bits (530), Expect = 9e-52, Method: Composition-based stats.
Identities = 70/503 (13%), Positives = 137/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF----------------IRDDNGKVQI 163
++ + FNG L D + A V+
Sbjct: 124 DRVSGQTQFNGVKVLAQDTTLTIQVGANDGEPIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
T + + + + + ++ F
Sbjct: 184 TAVTTKAYANNGTTLDVSGLDDAAIKAATGGTNGTASVTGGAVKFDADNNKYFVTIGGFT 243
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
A + N D +A A T +P+V ++ +
Sbjct: 244 GADAAKNGDYEVNVATDGTVTLAAGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALI 303
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ + + G + D + S
Sbjct: 304 AGGVDATDANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 344 LNITRHANTDAY-----------------------------------NEKLAMEEMVSFI 368
+ T + E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|38049764|gb|AAR10501.1| phase 2 flagellin [Salmonella enterica]
Length = 506
Score = 209 bits (530), Expect = 9e-52, Method: Composition-based stats.
Identities = 78/503 (15%), Positives = 145/503 (28%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKS------------------------------- 148
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 149 ---------VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
G+ + + +
Sbjct: 184 TAATTKAYADNGTTLDVSGLDDAAIKAATGGTAGAPTVTGGAVKFDADNNKYFVTIGGFT 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+ + + AT + A T Q V A A
Sbjct: 244 GADVAKNGDYEVNVATDGKVTLATGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALI 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
T+ + + ++ + + G + A Y +T A T Y
Sbjct: 304 AGGVDTTDANAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA-----------YNEKLAMEEMVSFI 368
+ TT + L + T +A+ A E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|38049810|gb|AAR10524.1| phase 2 flagellin [Salmonella enterica]
gi|308054853|gb|ADO01473.1| flagellin [Salmonella enterica subsp. diarizonae]
Length = 501
Score = 209 bits (530), Expect = 9e-52, Method: Composition-based stats.
Identities = 70/498 (14%), Positives = 137/498 (27%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVSA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + Y + + + +T FK +
Sbjct: 184 TDVISSTYSDGTKALTAPTATDIKTALGNPTVTGDTLTATVSFKDGKYYATVGGYTDTGD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT------- 292
G + V + T + + +D +
Sbjct: 244 AAKNGKYEVTVDSATGAVSFGATPTKATVTGDTTVTKVQVNAPVAADAATKKALQDGGVS 303
Query: 293 ---------------------------------------TKNSITSDPGYTNSTVAKVGN 313
+ + T+ T A
Sbjct: 304 SADANAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYNETTGAIKAKTTSYTAADGTT 363
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ S + + A E + ID +
Sbjct: 364 KTAANQLGGADGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|3098305|gb|AAC63950.1| flagellin [Pseudomonas stutzeri]
Length = 478
Score = 209 bits (530), Expect = 1e-51, Method: Composition-based stats.
Identities = 65/476 (13%), Positives = 146/476 (30%), Gaps = 30/476 (6%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA I+ + S L+
Sbjct: 3 LTVNTNVASLNTQKNLNRASEALSTTMQRLSSGLKINSAKDDAAGLQISNRLTSQINGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S A+ M ++ +++ ++ D S+QSE L ++
Sbjct: 63 VATKNANDGISIAQTAEGAMQESTNILQRMRELALQSANGSNSAEDRASLQSEYAALTTE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA ++F G N L G+++ + + + + + +
Sbjct: 123 LTRIAETTTFGGRNLLDGSFGTTSFQVGANANETINVTLGNISATKIGSQQVQSQAITPS 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+S + + G ++ T + + AA +
Sbjct: 183 ASGVTGGAITVTGSGETKSITVDAGTSAKDIAKQLDGAVTGLSASARTVAQLEVPAAASG 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
I + S S + A + ++D +
Sbjct: 243 TPANFSITVGDSKAIDMIGVTDNASLAEQLSSNASALGISVNFNEDTDELSITSDTGENI 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN------- 351
+ + V + + + + D + + +
Sbjct: 303 VFGAVSTTGVTTEYGGVTVNVQDGSGKYAASGTAIDEDFIATGAVELNSSKSYSLAGDGV 362
Query: 352 --------------------TDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ + ++ ID I +G++ +R
Sbjct: 363 DGLFAETGTTTASSKLTSVADSSITTAEGAQSAIAVIDKAISNIDTQRADLGAVQNRFDS 422
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
++ + + R+ DAD A+E+ L+ QT QQ + L+ N +L
Sbjct: 423 TVSNLQSIVENSTSARSRIQDADFAAETAELTKQQTLQQASTAILAQANQLPQSVL 478
>gi|38049798|gb|AAR10518.1| phase 2 flagellin [Salmonella enterica]
Length = 501
Score = 209 bits (530), Expect = 1e-51, Method: Composition-based stats.
Identities = 78/498 (15%), Positives = 147/498 (29%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------------------------- 153
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVSA 183
Query: 154 -----IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+G +T + + T T + ++ K D
Sbjct: 184 TDVISSTYSDGTKALTAPTATDIKTALGNPTVTGDTLTATVSFKDGKYYATVGGYTDTGD 243
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + ++ A + GA A T D + P+ A A S
Sbjct: 244 AAKNGKYEVTVDSATGAVSFGATPTKATVTGDTTVTKVQVNAPVAADAATKKALQDGGVS 303
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + AA+ + + + D Y G + + +
Sbjct: 304 SADANAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYNETTGAIKAKTTSYTAADGTT 363
Query: 329 KDLPK---------------EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
K S + + A E + ID +
Sbjct: 364 KTAANQLGGADGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|269139473|ref|YP_003296174.1| flagellin domain protein [Edwardsiella tarda EIB202]
gi|267985134|gb|ACY84963.1| flagellin domain protein [Edwardsiella tarda EIB202]
gi|304559367|gb|ADM42031.1| Flagellar biosynthesis protein [Edwardsiella tarda FL6-60]
Length = 417
Score = 209 bits (530), Expect = 1e-51, Method: Composition-based stats.
Identities = 74/452 (16%), Positives = 132/452 (29%), Gaps = 41/452 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L L +R+SSGLR++ A D+AA +I+ ++ L+
Sbjct: 4 VINTNSLSLMAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAISNRFTANINGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ D + I+ S SIQ EITQ S++
Sbjct: 64 ASRNANDGISLAQTTEGALNEVNDNLQNIRRLTVQAQNGSNSSSDLQSIQDEITQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I++ + FNG L D + A I N Q +D + ++V
Sbjct: 124 DRISQQTDFNGVKVLSKDQKLTIQVGANDGETIDIDLKNINAQSLGLDKFNVADSVDTTK 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + A T+
Sbjct: 184 VAAAAATKVNGPMVNIDTNGKDAGGKAITGYVKDDKGDVYGAYDDAGTTKYAKATIGDDG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
P A TS + + + A
Sbjct: 244 KVTAFDTASATPSGTTNAVSQVTSKVAPKGADAANVYAY--------------------- 282
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + K+ + A +
Sbjct: 283 -----------------TGTEKGASAYVIKEGTGADAKYFKASVAEDGTVTKGSALSTTA 325
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D + +G++ +R + + + + R+ DAD A+E
Sbjct: 326 KTADPLATLDKALSQVDDLRSGLGAVQNRFDSVINNLNSTVNNLSASRSRIQDADYATEV 385
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N ST +LSL R
Sbjct: 386 SNMSRAQILQQAGTSVLAQANQSTQNVLSLLR 417
>gi|33590239|gb|AAQ22681.1| flagellin [Escherichia coli]
Length = 447
Score = 209 bits (530), Expect = 1e-51, Method: Composition-based stats.
Identities = 68/453 (15%), Positives = 131/453 (28%), Gaps = 12/453 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A D + I + S
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGAN---------DGQTISIDLQKIDSSTLGLNGFS 174
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G + I + T L+ +
Sbjct: 175 VSKNAVSVGDAITQLPGETAADAPVTIKFDDSVKTDLKLTDASGLSLHNLKDENGNLTNQ 234
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ AA + + +T
Sbjct: 235 YVVQNGGKSYAATVAANGNVTLNKANVTYSDVANGIDTATQSGQLVQVGADSTGTPKAFV 294
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + D +T + S ++
Sbjct: 295 SIQGKSFGIDDAALKNNTGDATATQPGTSGTTVVAASIHLSTGKNSVDADVTASTEFTGA 354
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 355 STNDPLTLLDKAIASVDKFRSSLGAVQNRLSSAVTNLNNTTTNLSEAQSRIQDADYATEV 414
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 415 SNMSKAQIIQQAGNSVLSKANQVPQQVLSLLQG 447
>gi|225570000|ref|ZP_03779025.1| hypothetical protein CLOHYLEM_06095 [Clostridium hylemonae DSM
15053]
gi|225161470|gb|EEG74089.1| hypothetical protein CLOHYLEM_06095 [Clostridium hylemonae DSM
15053]
Length = 502
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 69/500 (13%), Positives = 150/500 (30%), Gaps = 52/500 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A+++ + L + N + +++SSG R++ A D+AA +I++ M++ L
Sbjct: 3 IQHNIAALNSYRNLTNNNSAVSKNLEKLSSGYRINRAGDDAAGLAISEKMRAQITGLETA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT----DSKSIQSEITQLQSQL 119
G S V A+ +++ +++ + D ++Q EI L+ ++
Sbjct: 63 QKNAQDGISLVQTAEGALTEVHSMLNRMVELADQSANGTYDNETDRANLQKEIQSLKDEI 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ G++FNG N L LGS T + + + + +
Sbjct: 123 DRISEGTNFNGINLLDGSLGSGTTGVTAASAANTAATAGNFDAQVNFSFSGLEAGKTVTV 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYD--------------------------- 212
T + + + + + + +
Sbjct: 183 KTVAKGTASGITADASGNITLALEAEANKTYTQADIDKLINDATLPKSASGLKITIDNDI 242
Query: 213 ---------------------ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
A + +T T + + N T
Sbjct: 243 KIGTTDGAADVVQVNAAVVAAAKNSSATDAANGITVTANTAGSGNDGHTLTFDNTTGNAK 302
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
A N T +G + ++ + G TK+
Sbjct: 303 GVTVLANGNVTINLAGGNYTASEINSMLAKAGADMTVSFDGTKSDADLKGAGAAGVFTLA 362
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
G T + + + + + + V I +
Sbjct: 363 GGAGLASGGGLTLQIGDTADSFNQLTVKVGNMSSTSLGIGAIDISTQEGGKAAVDLIKSA 422
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I ++ G +G+I +R+ + + + + + R+ D DMA+E + Q
Sbjct: 423 INQVSSTRGDLGAIQNRLEHTINNLSVTTENMTAAESRIRDVDMANEMMAYTKNNILVQA 482
Query: 432 AVQALSIVNNSTARILSLFR 451
+ L+ N +L L +
Sbjct: 483 SQAMLAQANQIPQGVLQLLQ 502
>gi|38049856|gb|AAR10547.1| phase 2 flagellin [Salmonella enterica]
gi|38049858|gb|AAR10548.1| phase 2 flagellin [Salmonella enterica]
Length = 499
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 72/496 (14%), Positives = 134/496 (27%), Gaps = 47/496 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +DS
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVDS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ V + + + A T
Sbjct: 184 KAVTGVSTLDTTGLTGTAIKTGVAGATTTTGSIKDDKVYYDSATKNYYAEVNFTDAADTA 243
Query: 240 DQAKGIATIPVPLP--------------------------------------------AA 255
+
Sbjct: 244 KNGFYKVNVADDGTVTMGASTTKEAAKPAGVVEVTKTQEEKAIKASADVKAALTAGGIDT 303
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A + + D + AT K + T+ T A +
Sbjct: 304 ADAATAEMVKMSYTDKNGKTIDGGYAVKVGDNYYAATQKKDGSFSVNTTSYTAADGTSKT 363
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ S + + A E + ID +
Sbjct: 364 ALNQLGGADGKTEVVTINGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQV 423
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 DTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSV 483
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 LAQANQVPQNVLSLLR 499
>gi|38049756|gb|AAR10497.1| phase 2 flagellin [Salmonella enterica]
gi|38049758|gb|AAR10498.1| phase 2 flagellin [Salmonella enterica]
gi|38049760|gb|AAR10499.1| phase 2 flagellin [Salmonella enterica]
Length = 506
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 70/503 (13%), Positives = 139/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF----------------IRDDNGKVQI 163
++ + FNG L D + A V+
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
T + + ++ + + + ++ F
Sbjct: 184 TAVTTKAYADNGTTLDASGLDDAAIKAAIGGTTGTAAVTGGTVKFDADNNKYFVTIGGFT 243
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
A + N D +A A T +P+V ++ +
Sbjct: 244 GADAAKNGDYEVNVATDGKVTLAAGATKTTMPAGAATKTEVQELKDTPAVVSADAKNALI 303
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ + + G + D + S
Sbjct: 304 AGGVDATDANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 344 LNITRHANTDAY-----------------------------------NEKLAMEEMVSFI 368
+ T + E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|38049814|gb|AAR10526.1| phase 2 flagellin [Salmonella enterica]
gi|38049818|gb|AAR10528.1| phase 2 flagellin [Salmonella enterica]
gi|38049826|gb|AAR10532.1| phase 2 flagellin [Salmonella enterica]
Length = 501
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 75/498 (15%), Positives = 144/498 (28%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVSA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + Y + + + +T FK +A
Sbjct: 184 TDVISSTYSDGTQALTAPTATDIKAALGNPTVTGDTLTATVSFKDGKYYATVSGYTDAGD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + V + T S + +D + ++ S
Sbjct: 244 TAKNGKYEVTVDSATGAVSFGATPTKSTVTGDTAVTKVQVNAPVAADATTKKALQDGGVS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDT--------------------------------------- 320
+T+ K+ T T
Sbjct: 304 SADANAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTT 363
Query: 321 -------ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ S + + A E + ID +
Sbjct: 364 KTVANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|238794023|ref|ZP_04637641.1| Flagellin [Yersinia intermedia ATCC 29909]
gi|238726655|gb|EEQ18191.1| Flagellin [Yersinia intermedia ATCC 29909]
Length = 499
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 76/499 (15%), Positives = 144/499 (28%), Gaps = 48/499 (9%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++ + L +R+SSG R++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNILSLTTQNNMNKSQSALGSAIERLSSGQRINSAKDDAAGQAIANRFTSNIKGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ S G S + + + + + ++ +D KSIQ EI Q
Sbjct: 61 TQASRNANDGISLAQTTEGALGEINNNLQRVRELSVQAATGSNSSSDLKSIQDEIKQRLD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD---------NGKVQITTIDY 168
++ ++ + FNG L + A I + G
Sbjct: 121 EIDRVSDQTQFNGVKVLAGNSSMKVQVGANDGETISINLEKIDSKSLGLQGFNVDGAKQA 180
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
+D T ++ G +K+ + + D V + ATT+
Sbjct: 181 SVDDLTSQFKATGSTNYNVGSPAVAYKVDINSGAVTDGLGGVAQYIDAGTGLFSGTATTN 240
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD-- 286
+ A+ + + A T G + + A+ + D
Sbjct: 241 NSPTAYTTTATAGAEATSIAAASVGKAIGDKFTAQGMEFTVKTAATANGNGVFSATVDGK 300
Query: 287 ----------------------------------IWVRATTKNSITSDPGYTNSTVAKVG 312
+ T
Sbjct: 301 SVDFTTSASTAPDGTAAEVKTSSAVFTSVVGGGLTTKATEANRAATLADLDLKGATKTGS 360
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ + S T N DA + + + ++ +D +
Sbjct: 361 TLTVNGTAYTANAKGDEITLGGKVMYMSRTANGNTTLINEDAAASQKSTDNQLATVDKAL 420
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A +G++ +R + + + R+ DAD ++E + +S Q QQ
Sbjct: 421 AQVDALRSGLGAVQNRFDSAITNLGNTINNLTSARSRIQDADYSTEVSNMSRAQILQQAG 480
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 481 TSVLAQANQVPQTVLSLLR 499
>gi|320354261|ref|YP_004195600.1| flagellin domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320122763|gb|ADW18309.1| flagellin domain protein [Desulfobulbus propionicus DSM 2032]
Length = 482
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 79/480 (16%), Positives = 156/480 (32%), Gaps = 30/480 (6%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN ++++A + L NL R+SSGLR++ A D+AA +I+ M S L+
Sbjct: 3 LSINTNVASLNAQRNLGATQSNLAKSMQRLSSGLRINSAKDDAAGLAISDRMTSQIRGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ M ++ +++ ++ G+D S+Q E+ QLQ +
Sbjct: 63 QAVRNANDGISLAQTAEGAMQESTNILQRMRELAVQSANDSNTGSDRASLQKEVAQLQQE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------IRDDNGKVQITTIDYYLD 171
L IA +SFNG+N L + + + + + G Q+
Sbjct: 123 LDRIATTTSFNGKNVLDGTFTAQSFQVGANAGETISFSVGGASSTQIGAHQLKVAGTINQ 182
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
++ T I V + + T +
Sbjct: 183 ATAGTANTVAAQTMTVSGSLGTESITVAAGATAKTIAEKINNISNDTGVNATAVTNAKLT 242
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
+ A A Q G T + A + + + + + A + + +
Sbjct: 243 VGATGAQSFQLFGKNTTGETISANITNLSDLTELADAINSKAAETGVTAELAADKASITL 302
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK------------------ 333
+ + + G + +
Sbjct: 303 KNTEGEDIQMTWASGNQSLQGLAADGTTAAGSAVAMTSAGSASVGGNITFNAEKSYSVAS 362
Query: 334 --EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ + + + + + +S ID+ I +G+I +R
Sbjct: 363 TSTTTVLDAASKGSALTSVGSVDISTRSGANDALSVIDSAISFIDTERANLGAIQNRFES 422
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + + V R++DAD+A E++ ++ QQ V L+ N + LSL +
Sbjct: 423 TISNLQNISENVSAARSRILDADIAQETSNMTKQNILQQAGVSILAQANQTPQLALSLLQ 482
>gi|38049754|gb|AAR10496.1| phase 2 flagellin [Salmonella enterica]
Length = 506
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 74/503 (14%), Positives = 133/503 (26%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGS-----------------FIRDDNGKVQ 162
++ + FNG L D + A ++
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
+ LD+S + +
Sbjct: 184 TAVTTKTYADNGITLDASGLDDAAIKAAIGGTTGTAAVTGGTVKFDADNNKYFVTIGGFS 243
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
+ AT A A A T V+A A +
Sbjct: 244 GADAAKNGDYEVNVATDGTVTLAAGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALI 303
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
A + N + G D + +
Sbjct: 304 AGGVDATDANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 343 TLNITRHANTD----------------------------------AYNEKLAMEEMVSFI 368
T+ A A E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|38049919|gb|AAR10578.1| phase 1 flagellin [Salmonella enterica]
gi|38049925|gb|AAR10581.1| phase 1 flagellin [Salmonella enterica]
Length = 501
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 75/498 (15%), Positives = 144/498 (28%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI------------------------- 154
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVSD 183
Query: 155 -----RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ K I D + +S + + ++ K D +
Sbjct: 184 TAVAASYSDSKQNIAVPDKAAITAKIGAATSGGAGIKADISFKDGKYYATVSGYDDAADT 243
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
+ + ++ A T + D A +G
Sbjct: 244 DKNGTYEVTVAADTGAVTFATTPTVVDLPTDAKAVSKVQQNDTEIAATNAKAALKAAGVA 303
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + + + GY ++V K G V + +
Sbjct: 304 DAEADTATLVKMSYTDNNGKVIDGGFAFKTSGGYYAASVDKSGAASLKVTSYVDATTGTE 363
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAME----------------EMVSFIDTQIK 373
G T +T T ++ + ID +
Sbjct: 364 KTAANKLGGADGKTEVVTIDGKTYNASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|283832677|ref|ZP_06352418.1| flagellin [Citrobacter youngae ATCC 29220]
gi|291072352|gb|EFE10461.1| flagellin [Citrobacter youngae ATCC 29220]
Length = 493
Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 78/490 (15%), Positives = 140/490 (28%), Gaps = 41/490 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSTLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + ++ +D SIQ+EITQ S++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQASNGTNSDSDLSSIQAEITQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGS--------------------------- 152
++ + FNG L D A
Sbjct: 124 DRVSGQTQFNGVKVLAGDNTLKIQVGANDNETISINLKEITSSTLGLNTFSVTGDKAATA 183
Query: 153 -----------FIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
+ G T + + G L+ + KV+
Sbjct: 184 DQLVKDFGATGTMNYKLGATDYTADVKTGAIKDGAAAAVFVGAADNALVTTSGNTKVDET 243
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
I + A+ T T K W A T +
Sbjct: 244 DGATITAAATAAATTGGTVGAKFTFKGTEWTAVAGTTANANGNGTYTAKVDGQDITMTVA 303
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
S ++ +++ + I + + TT + +
Sbjct: 304 GSTSAVGAGATLSITGGNIYEQGAAGSNKLTTHANNVAAKESDLVAAKATKTGGTLDVGG 363
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ + + A + IDT + G
Sbjct: 364 VAYAVDGSGVVTNGGEITFVKNAGTANASLVKQSQASEATRNQLKLIDTALAQVDTLRGD 423
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G++ +R + + + R+ DAD A+E + +S Q QQ L+ N
Sbjct: 424 LGAVQNRFDSTITNLGNTVNNLTSARSRIEDADYATEVSNMSKAQILQQAGTSVLAQANQ 483
Query: 442 STARILSLFR 451
+LSL R
Sbjct: 484 VPQNVLSLLR 493
>gi|38049812|gb|AAR10525.1| phase 2 flagellin [Salmonella enterica]
Length = 501
Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 78/498 (15%), Positives = 147/498 (29%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------------------------- 153
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVSA 183
Query: 154 -----IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+G +T + + T T + ++ K D
Sbjct: 184 TDVISSTYSDGTKALTAPTATDIKTALGNPTVTGDTLTATVSFKDGKYYATVGGYTDTGD 243
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + ++ A + GA A T D + P+ A A S
Sbjct: 244 AAKNGKYEVTVDSATGAVSFGATPTKATVTGDTTVTKVQVNAPVAADAATKKALQDGGVS 303
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + AA+ + + + D Y G + + +
Sbjct: 304 SADANAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYNETTGAIKAKTTSYTAADGTT 363
Query: 329 KDLP---------------KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
K S + + A E + ID +
Sbjct: 364 KMAANQLGGADGKTEVVTINGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|38049738|gb|AAR10488.1| phase 2 flagellin [Salmonella enterica]
Length = 506
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 74/503 (14%), Positives = 131/503 (26%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI-----------------RDDNGKVQ 162
++ + FNG L D + A I +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
LD S + +
Sbjct: 184 TAVTTKAYANNGTTLDVSGLDDAAIKAATGGTNGAPSVTGSAVKFDADNNKYFVTIGGFT 243
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
+ AT + A AA T V+ A +
Sbjct: 244 GADAAKNGDYEVNVATDGKVTLATGATKTTMPAGAATKTEVQELKYTPAVVSTDAKNALI 303
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
A + N + G D + +
Sbjct: 304 AGGVDATNANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 343 TLNITRHANTD----------------------------------AYNEKLAMEEMVSFI 368
T+ A A E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|38049800|gb|AAR10519.1| phase 2 flagellin [Salmonella enterica]
gi|38049828|gb|AAR10533.1| phase 2 flagellin [Salmonella enterica]
gi|38049830|gb|AAR10534.1| phase 2 flagellin [Salmonella enterica]
Length = 501
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 72/498 (14%), Positives = 140/498 (28%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVSA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + Y + ++ + + FK +A
Sbjct: 184 TDVISSTYSDGTQALTAPTATEIKAALGNPTVTGDTLTAAVSFKDGKYYATVSGYTDAGD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT------- 292
G + V + T S + +D +
Sbjct: 244 TAKNGKYEVTVDSATGAVSFGATPTKSTVTGDTAVTKVQVNAPVAADAATKKALQDGGVS 303
Query: 293 ---------------------------------------TKNSITSDPGYTNSTVAKVGN 313
+ + T+ T A
Sbjct: 304 SADASAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTT 363
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ S + + A E + ID +
Sbjct: 364 KTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|154354090|gb|ABS76149.1| flagellin [Edwardsiella tarda]
Length = 418
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 78/452 (17%), Positives = 152/452 (33%), Gaps = 40/452 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L L +R+SSGLR++ A D+AA +I+ ++ L+
Sbjct: 4 VINTNSLSLMAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAISNRFTANINGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ D + I+ S SIQ EITQ S++
Sbjct: 64 ASRNANDGISLAQTTEGALNEVNDNLQNIRRLTVQAQNGSNSSSDLQSIQDEITQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I++ + FNG L D + A +D + +++
Sbjct: 124 DRISQQTDFNGVKVLSKDQKLTIQVGAN------------------DGETIDIDLKNINA 165
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G +++ + D KV+ + +V T + K +G +
Sbjct: 166 QSLGLDKFNVADSVDPAKVDTTAATAVKTNVDVNITTKTGTKADGKDVTGYVQLGNDLYA 225
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A + T + + A + T I+ + A + + T
Sbjct: 226 KNTDNKYFKVNTIDKATGEVSAIDTTDATATAKDAPAVTSIKKEVAPTGPLAGSVYAYT- 284
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + K+ + + A +
Sbjct: 285 ------------------GSEKGASAYVIKEGTGADAKYFKASIADDGTVTKGTALSTTA 326
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D + +G++ +R + + + + R+ DAD A+E
Sbjct: 327 KTADPLATLDKALSQVDDLRSGLGAVQNRFDSVINNLNSTVNNLSASRSRIQDADYATEV 386
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N ST +LSL R
Sbjct: 387 SNMSRAQILQQAGTSVLAQANQSTQNVLSLLR 418
>gi|33590225|gb|AAQ22674.1| flagellin [Escherichia coli]
Length = 447
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 67/453 (14%), Positives = 130/453 (28%), Gaps = 12/453 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A D + I + S
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGAN---------DGQTISIDLQKIDSSTLGLNGFS 174
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G + I + T + +
Sbjct: 175 VSKNAVSVGDAITQLPGETAADAPVTIKFDDSVKTDLKLTDASGSSLHNLKDENGNLTNQ 234
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ AA + + +T
Sbjct: 235 YVVQNGGKSYAATVAANGNVTLNKANVTYSDVANGIDTATQSGQLVQVGADSTGTPKAFV 294
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + D +T + S ++
Sbjct: 295 SVQGKSFGIDDAALKNNTGDATATQPGTSGTTVVAASIHLSTGKNSVDADVTASTELTGA 354
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 355 STNDPLTLLDKAIASVDKFRSSLGAVQNRLSSAVTNLNNTTTNLSEAQSRIQDADYATEV 414
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 415 SNMSKAQIIQQAGNSVLSKANQVPQQVLSLLQG 447
>gi|88813193|ref|ZP_01128433.1| flagelline [Nitrococcus mobilis Nb-231]
gi|88789515|gb|EAR20642.1| flagelline [Nitrococcus mobilis Nb-231]
Length = 505
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 75/501 (14%), Positives = 146/501 (29%), Gaps = 53/501 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L +L R+SSGLR++ A D+AA +IA+ S L+
Sbjct: 5 INTNIASLNAQRNLDKSQGDLRTSLQRLSSGLRINSAKDDAAGLAIAERFTSQIKGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ G S A+ + + + I+ D +++ E+ Q +++
Sbjct: 65 TRNANDGISLAQTAEGALVGINNNLQRIRELSVQSANSTNTAADREALNQEVAQRIAEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++FNG L G+S + + + + V+ I + ++
Sbjct: 125 RIAAQTAFNGLKVLDGSFGNSQFQVGANAGETISVNLTQGVRTNQIGQIAQGTSTAEVTT 184
Query: 181 TDGTE--------------------------------------------------RYGLL 190
+ L
Sbjct: 185 AALSGSGTVQIGGGEVATIGASVAGTAAGQNVGSAYSKAAAINAAGVAGLTVSAKNNIEL 244
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
+ ++ D + + + TT + T D +
Sbjct: 245 AIADTTGTAGGDTYSLRINGTDVYASFDQQANGVLTTQQIADAINSRTTDTGVAASLSGA 304
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
L + A + + V T ST A
Sbjct: 305 NLRLSAADGRDIIIGQDLGGAAGGGITAGGGGSTTVNGVTFRDGTVGTVANATATSTDAT 364
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
N T S + D + + T T + + ++ +D+
Sbjct: 365 AVNGGTLTFTSSDNIVLTGDGTLYGFANANNTIAKDTTTVATLDISTVNGANDALNRVDS 424
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ + G +G+ +R + + + R+ DAD A E+ L+ Q QQ
Sbjct: 425 ALTTVNSLRGTLGATQNRFESTIANLSTSSENLSAARSRIQDADFAQETAALTRAQILQQ 484
Query: 431 LAVQALSIVNNSTARILSLFR 451
L N +LSL +
Sbjct: 485 AGTSVLQQANALPQNVLSLLQ 505
>gi|308054723|gb|ADO01408.1| flagellin [Salmonella enterica subsp. salamae]
Length = 506
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 71/503 (14%), Positives = 139/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF----------------IRDDNGKVQI 163
++ + FNG L D + A V+
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
T + + ++ T+ + + ++ F
Sbjct: 184 TAVTTTAYADNGTTLDASGLTDAAIKTATGGTNGAPTVTGGAVKFDADNNKYFVTIGGFT 243
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
A + N D +A A T +P A++ +
Sbjct: 244 GADLAKNGDYEVNVATDGTVTLAPGATKTTMPAGATTKTEVQELKTTPVAASADAKNALI 303
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ + + G + D + S
Sbjct: 304 AGGVDTTDANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDETTGAIKAKTTSYTA 363
Query: 344 LNITRHANTDAY-----------------------------------NEKLAMEEMVSFI 368
+ T + E ++ I
Sbjct: 364 ADGTTKTAANQLGGADGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLAKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|38049816|gb|AAR10527.1| phase 2 flagellin [Salmonella enterica]
Length = 501
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 79/498 (15%), Positives = 150/498 (30%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------------------------- 153
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVSA 183
Query: 154 -----IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+G +T + + T T + ++ K D
Sbjct: 184 TDVISSTYSDGTQALTAPTATDIKAALGNPTVTGDTLTAAVSFKDGKYYATVSGYTDAGD 243
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + ++ A + GA + T D A + P+ A A S
Sbjct: 244 TAKNGKYEVTVDSTTGAVSFGATPTKSTVTGDTAVTKVQVNAPVAADAATKKALQDGGVS 303
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + AA+ + + + D Y G + + +
Sbjct: 304 SADASAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTT 363
Query: 329 KDLPK---------------EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
K S + + A E + ID +
Sbjct: 364 KTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|308048743|ref|YP_003912309.1| flagellin domain protein [Ferrimonas balearica DSM 9799]
gi|307630933|gb|ADN75235.1| flagellin domain protein [Ferrimonas balearica DSM 9799]
Length = 476
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 74/473 (15%), Positives = 153/473 (32%), Gaps = 25/473 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M+A + L + +++ +R+SSGLR++ A D+AA I+ + S L
Sbjct: 4 TVNTNVTSMTAQRNLNGASASMQTSMERLSSGLRINSAKDDAAGLQISNRLTSQVRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M ++ +++ +++ G D ++Q EI+ LQ++L
Sbjct: 64 AMRNANDGISIAQTAEGAMQESTNILQRMRDLSLQSANGSNSGEDRTAMQKEISALQTEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTID------------ 167
IA +SF G+ L GS + + + + +
Sbjct: 124 NRIAETTSFGGQTLLDGSYGSQSFQVGSNSNETINIALRSTDSGSIGSSQIGQTVGTVAG 183
Query: 168 -YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
D T G + + ++ S ++
Sbjct: 184 VIGADTVAYTAGDFTITNAVSGKAETITTTVDDDASTLAKKINDVSGSTGVTATASNTIE 243
Query: 227 TSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD 286
S + + ++ T N+ S T+G + V + +D
Sbjct: 244 LSDIDFDSGSLDWEIGGATITGAQSEQDMIDQINSQSSTTGVSAAMVEGKVRITQESGAD 303
Query: 287 IWVRATTKNSITSDPGYTNST---------VAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
+ A S+ + S + +S +
Sbjct: 304 MAFDAAVAGGGGSNTPVIKMQSVVGDTLGAEFTAADGSNANGVLSFSSNSAFTIGGTNAG 363
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
+ T + + + + + ID I +G++ +R+ + +
Sbjct: 364 QLTSGTQSTLSTVASIDISSADGAQSAIDIIDGAISMIDNQRADLGAVQNRLSHTINNLG 423
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
++ V R+ D D A E+ ++ Q QQ L+ N LSL
Sbjct: 424 NIQTNVADARSRIQDVDFAKETAEMTKQQVLQQSGSAMLAQANQIPQLALSLL 476
>gi|292492372|ref|YP_003527811.1| flagellin domain protein [Nitrosococcus halophilus Nc4]
gi|291580967|gb|ADE15424.1| flagellin domain protein [Nitrosococcus halophilus Nc4]
Length = 489
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 65/484 (13%), Positives = 144/484 (29%), Gaps = 37/484 (7%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN +++A + L L+ R+SSGLR++ A D+AA +I M + L+ +
Sbjct: 6 NTNIMSLNAQRNLDRSQSTLQTSLQRLSSGLRINSAKDDAAGLAITDRMTAQIRGLNQAA 65
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRD 121
G S A+ + ++ ++ ++ D S+Q+E+TQL +++
Sbjct: 66 RNANDGISLAQTAEGALHESTSLLQRVRELAVQSANDTNTDADRTSLQNEVTQLIAEMNR 125
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA + FNG++ L L ++ + + + + T S
Sbjct: 126 IASSTQFNGKSLLDGSLSNAIFHVGANADQTISVGIDDARTSRLGANATLTSTGTAVSDG 185
Query: 182 DGTERYGLLDR----------------------------------NHKIKVEPQVLKDID 207
+ V
Sbjct: 186 QSAALTSPSGVLEINGTAITVTSDGLSTRDAAASANAVAAGINALSATTGVSATANATTA 245
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
+ A A A+ D + + + ++
Sbjct: 246 NLGTITAAATGFAAGDFAINGINITAGAIASGDSDSALRDAINAVQNQTGVTAALNSSNE 305
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
+ + + + + G + + VG D
Sbjct: 306 LVLTAADGRNIQLETDGTQADGVSVFGAATFDTNGGSAVDIVTVGTVTLDSDEAFVVDTG 365
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+ ++ + + + ++ +D + + G +G++ +
Sbjct: 366 ITQATHGMAITAGTYNVDTSNAMENVDISTQSGANSALANVDRALSQIDSMRGDLGALQN 425
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
R ++ + + + R+ DAD A+E+ L+ Q QQ L+ N+ +L
Sbjct: 426 RFQSTISNLENVSENLSAARSRIRDADFAAETAELTRNQILQQAGTAMLAQANSLPQNVL 485
Query: 448 SLFR 451
SL +
Sbjct: 486 SLLQ 489
>gi|38049736|gb|AAR10487.1| phase 2 flagellin [Salmonella enterica]
gi|38049740|gb|AAR10489.1| phase 2 flagellin [Salmonella enterica]
Length = 506
Score = 208 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 71/503 (14%), Positives = 138/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF----------------IRDDNGKVQI 163
++ + FNG L D + A V+
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
T + + + + + ++ F
Sbjct: 184 TAVTTKAYANNGTTLDVSGLDDAAIKAATGGTNGAPSVTGSAVKFDADNNKYFVTIGGFT 243
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
A + N D +AT A T +P+V ++ +
Sbjct: 244 GADAAKNGDYEVNVATDGKVTLATGATKTTMPAGAATKTEVQELKDTPAVVSTDAKNALI 303
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ + + G + D + S
Sbjct: 304 AGGVDATNANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 344 LNITRHANTDAY-----------------------------------NEKLAMEEMVSFI 368
+ T + E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|168262130|ref|ZP_02684103.1| flagellin [Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
gi|38049796|gb|AAR10517.1| phase 2 flagellin [Salmonella enterica]
gi|38049802|gb|AAR10520.1| phase 2 flagellin [Salmonella enterica]
gi|38049824|gb|AAR10531.1| phase 2 flagellin [Salmonella enterica]
gi|38049840|gb|AAR10539.1| phase 2 flagellin [Salmonella enterica]
gi|205349144|gb|EDZ35775.1| flagellin [Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
gi|308054845|gb|ADO01469.1| flagellin [Salmonella enterica subsp. enterica]
Length = 501
Score = 208 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 79/498 (15%), Positives = 150/498 (30%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------------------------- 153
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVSA 183
Query: 154 -----IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+G +T + + T T + ++ K D
Sbjct: 184 TDVISSTYSDGTQALTAPTATDIKAALGNPTVTGDTLTAAVSFKDGKYYATVSGYTDAGD 243
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + ++ A + GA + T D A + P+ A A S
Sbjct: 244 TAKNGKYEVTVDSATGAVSFGATPTKSTVTGDTAVTKVQVNAPVAADAATKKALQDGGVS 303
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + AA+ + + + D Y G + + +
Sbjct: 304 SADASAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTT 363
Query: 329 KDLPK---------------EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
K S + + A E + ID +
Sbjct: 364 KTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|168335506|ref|ZP_02693587.1| flagellin domain protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 412
Score = 208 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 65/450 (14%), Positives = 146/450 (32%), Gaps = 44/450 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A + L + + +++SSGLR++ A D+AA +I++ M++ L
Sbjct: 3 INTNLMAINAQRNLGINQGDQGGIMEKLSSGLRINRAGDDAAGLAISEKMRNQIKGLQQS 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S+ G S + +A+ +S+ D++ ++ + D K + E+ QL +++
Sbjct: 63 SENSQDGISLIQVAEGALSETHDMLKRMREMSIQSMNDTYTSEDRKKLDIELKQLITEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + FN ++ L D S L ++
Sbjct: 123 GLADKTEFNEQSLLLGDPSGKGRDSVAIRRQSLTIIVGSYYGKMGAYQSLMGAAYSIEXG 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ L + + ++ + A + + K + A
Sbjct: 183 SSMLTAQTRLIKLEQDISALEIKAAGESDKAKAQAVLVSVSQKQISLETTKASIAALEAS 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A A+ V L +A T+ + + + A + S+
Sbjct: 243 SAGKKASAAVKLQSAIDWEATSVVRAANALQATMNQAVGPNEFTFQVGANNDQIISLNIK 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + +
Sbjct: 303 AMNAIALGLTTT-----------------------------------------KIDTPES 321
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ID ++ + ++G++ +R+ + + ++ ++ DADMA E
Sbjct: 322 AHIALNSIDAAVEIVSRQRAELGAVQNRLEHTVKNLDNTAENLQSAESQIRDADMAEEMV 381
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
L+ + Q + L+ N S ++L L
Sbjct: 382 NLTRVNILTQASQSMLAQANQSPQQVLQLL 411
>gi|224584549|ref|YP_002638347.1| flagellin [Salmonella enterica subsp. enterica serovar Paratyphi C
strain RKS4594]
gi|168828933|gb|ACA33929.1| FljB [Salmonella enterica subsp. enterica serovar Choleraesuis]
gi|224469076|gb|ACN46906.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|308054837|gb|ADO01465.1| flagellin [Salmonella enterica subsp. enterica]
gi|308054843|gb|ADO01468.1| flagellin [Salmonella enterica subsp. enterica]
gi|315633331|gb|ADU54194.1| flagellin [Salmonella enterica subsp. enterica serovar Michigan]
Length = 506
Score = 208 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 79/503 (15%), Positives = 144/503 (28%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKS------------------------------- 148
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 149 ---------VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
G+ + T + S +
Sbjct: 184 TAVTTKAYANNGTTLDVSGLDDTAIKAAIGGTTGTAAVTGSAVKFDADNNKYFVTIGGFT 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+ + + AT + A T Q V A A
Sbjct: 244 GADAAKNGDYEVNVATDGTVTLAAGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALI 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + + + G + A Y +T A T Y
Sbjct: 304 AGGVDATDANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD-----------AYNEKLAMEEMVSFI 368
+ TT + L + T +A+ A E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|38049820|gb|AAR10529.1| phase 2 flagellin [Salmonella enterica]
gi|38049822|gb|AAR10530.1| phase 2 flagellin [Salmonella enterica]
gi|308054847|gb|ADO01470.1| flagellin [Salmonella enterica subsp. enterica]
Length = 501
Score = 208 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 79/498 (15%), Positives = 150/498 (30%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------------------------- 153
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVSA 183
Query: 154 -----IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+G +T + + T T + ++ K D
Sbjct: 184 TDVISSTYSDGTQALTAPTATDIKAALGNPTVTGDTLTAAVSFKDGKYYATVSGYTDAGD 243
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + ++ A + GA + T D A + P+ A A S
Sbjct: 244 TAKNGKYEVTVDSATGAVSFGATPTKSTVTGDTAVTKVQVNAPVAADAATKKALQDGGVS 303
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + AA+ + + + D Y G + + +
Sbjct: 304 SADANAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTT 363
Query: 329 KDLPK---------------EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
K S + + A E + ID +
Sbjct: 364 KTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|160939645|ref|ZP_02086993.1| hypothetical protein CLOBOL_04537 [Clostridium bolteae ATCC
BAA-613]
gi|158437436|gb|EDP15200.1| hypothetical protein CLOBOL_04537 [Clostridium bolteae ATCC
BAA-613]
Length = 506
Score = 208 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 78/499 (15%), Positives = 159/499 (31%), Gaps = 51/499 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++++++L N + +++SSG R++ A D+AA +I++ M++ L A
Sbjct: 8 IQHNIMALNSNRQLGVNNSAVSKSLEKLSSGFRINRAGDDAAGLAISEKMRAQIKGLEAA 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT----DSKSIQSEITQLQSQL 119
+D S V A+ G+ + +++ + T D K++Q E++ L+ ++
Sbjct: 68 TDNSQDAISLVQTAEGGLQEVHSMLNRMTELATKSANGTYTDDVDRKALQDEVSALKDEI 127
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA G+ FNG L +G T ++ V + + D I+ +
Sbjct: 128 NRIADGTDFNGIKLLDGTMGVGTTGVSGKVDLTAGKVDAFNATISGAGENTSVDFKTAVG 187
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G + L + I + + +T + A L
Sbjct: 188 TATGVKAEWLGGKLTVTITGANANDKITQEQINQALASATGTPETAKNIKIELDGDININ 247
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ T + A A + +G SG S A A + + +
Sbjct: 248 AKTTIDGTATLVTAKAVQATSADTGASGISISSTKAGANTHTLTTKTAGTIGAIVDVDGN 307
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK-------------------------- 333
T + + +++ +
Sbjct: 308 VALNLTGTKSYTATEINKMLSDAGSDIRMDFEGSKTGTEISGAKSGVAANVLKLGENGKA 367
Query: 334 ---------------------EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
N+ + + +S I T I
Sbjct: 368 GTGLAAGGGMKLQIGDTNDSYNQLELSIADMHVNALDLNSVNISTREGASAAMSKIKTAI 427
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ + GK+G+I +R+ + + + + + R+ D DMA E + Q A
Sbjct: 428 NTVSTSRGKLGAIQNRLEHTINNLGVTTENITSAESRIRDVDMAKEMMNYTKNSVLVQSA 487
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N +L L +
Sbjct: 488 QAMLAQANQQPQSVLQLLQ 506
>gi|38050239|gb|AAR10738.1| phase 1 flagellin [Salmonella enterica]
gi|308054775|gb|ADO01434.1| flagellin [Salmonella enterica subsp. diarizonae]
gi|315633333|gb|ADU54195.1| flagellin [Salmonella enterica subsp. diarizonae serovar
47:l,v:1,5,(7)]
Length = 506
Score = 208 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 77/503 (15%), Positives = 142/503 (28%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKS------------------------------- 148
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVKD 183
Query: 149 ---------VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
G+ + + +
Sbjct: 184 TAATTKAYADNGTTLDVSGLDDAAIKAATGGTTGAPTVTGGAVKFDADNNKYFVTIGGFT 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+ + AT + A T Q V A A
Sbjct: 244 GGDAAKNGDYEVNVATDGKVTLATGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALI 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
T+ + + ++ + + G + A Y +T A T Y
Sbjct: 304 AAGVDTTDANAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYNETTGAIKAKTTSYTA 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA-----------YNEKLAMEEMVSFI 368
+ TT + L + T +A+ A E + I
Sbjct: 364 ADGTTKTAANQLGGADGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|54307278|ref|YP_128298.1| flagellin type B [Photobacterium profundum SS9]
gi|46911698|emb|CAG18496.1| Hypothetical flagellin type B [Photobacterium profundum SS9]
Length = 426
Score = 208 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 69/453 (15%), Positives = 136/453 (30%), Gaps = 34/453 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN ++M+A + L+ +L +R+S+GLR++ A D+AA IA M S L
Sbjct: 4 SINTNFASMNAQRNLQTTQGSLNGSLERLSTGLRINSAKDDAAGMQIANRMTSQVNGLKV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ + + +++ ++ +D ++ E L +L
Sbjct: 64 AQRNANDGISMSQTAEGSLQEFTNILQRQRDLAVQSKNGTNSDSDRTALNKEFQALSKEL 123
Query: 120 RDIARGSSF-NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
I ++F GE + V + T + L V
Sbjct: 124 DRIVDTTTFGKGEKLFDKLNTGVDFQVGADVDPKDGTKLSLSDATTVMTDALAALGVTPS 183
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ + +A +
Sbjct: 184 ATALTDVTAVETKLAAVSALADGTKSGDLT--------ALGGDVAVAQQFLDDMGIEGTV 235
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ + + L T + + + A + T
Sbjct: 236 EEGGTPGTNVTITLATGGKQAATDLEALATTAKTTTEDAGTGIKLPAVGADGYDMSAMAT 295
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ S++ V +S +LD+ A +
Sbjct: 296 AMKAAGVSSLPISDPNVINVKVDSASLDT----------------------AALGKIDTM 333
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
E + ID I + +G+ +R + + + + + GR++DAD+A+E
Sbjct: 334 AGSETAIQEIDKMIDNVGSVRADLGATQNRFASTINNLGNIAENMSVAKGRIMDADIAAE 393
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
S ++ T Q + LS N + + L R
Sbjct: 394 SANMTKQNTMMQAGITVLSQANQMPSMVSQLLR 426
>gi|16766083|ref|NP_461698.1| flagellin [Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|161615654|ref|YP_001589619.1| flagellin [Salmonella enterica subsp. enterica serovar Paratyphi B
str. SPB7]
gi|167552738|ref|ZP_02346490.1| flagellin [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|168244559|ref|ZP_02669491.1| flagellin [Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|168464120|ref|ZP_02698037.1| flagellin [Salmonella enterica subsp. enterica serovar Newport str.
SL317]
gi|194445420|ref|YP_002042012.1| flagellin [Salmonella enterica subsp. enterica serovar Newport str.
SL254]
gi|194448978|ref|YP_002046729.1| flagellin [Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|197264269|ref|ZP_03164343.1| flagellin [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|200388284|ref|ZP_03214896.1| flagellin [Salmonella enterica subsp. enterica serovar Virchow str.
SL491]
gi|1706868|sp|P52616|FLJB_SALTY RecName: Full=Phase 2 flagellin
gi|882137|gb|AAC43350.1| phase-2 flagellin structural protein [Salmonella enterica]
gi|882143|gb|AAC43353.1| phase-2 flagellin structural protein [Salmonella enterica]
gi|882145|gb|AAC43354.1| phase-2 flagellin structural protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|4001807|gb|AAC94993.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|16421319|gb|AAL21657.1| filament structural protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|38049714|gb|AAR10476.1| phase 2 flagellin [Salmonella enterica]
gi|38049718|gb|AAR10478.1| phase 2 flagellin [Salmonella enterica]
gi|38049720|gb|AAR10479.1| phase 2 flagellin [Salmonella enterica]
gi|38049722|gb|AAR10480.1| phase 2 flagellin [Salmonella enterica]
gi|38049724|gb|AAR10481.1| phase 2 flagellin [Salmonella enterica]
gi|38049728|gb|AAR10483.1| phase 2 flagellin [Salmonella enterica]
gi|38050229|gb|AAR10733.1| phase 1 flagellin [Salmonella enterica]
gi|148644997|gb|ABR01030.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Saintpaul]
gi|148645001|gb|ABR01032.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|161365018|gb|ABX68786.1| hypothetical protein SPAB_03439 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404083|gb|ACF64305.1| flagellin [Salmonella enterica subsp. enterica serovar Newport str.
SL254]
gi|194407282|gb|ACF67501.1| flagellin [Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|195633721|gb|EDX52135.1| flagellin [Salmonella enterica subsp. enterica serovar Newport str.
SL317]
gi|197242524|gb|EDY25144.1| flagellin [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|199605382|gb|EDZ03927.1| flagellin [Salmonella enterica subsp. enterica serovar Virchow str.
SL491]
gi|205322705|gb|EDZ10544.1| flagellin [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205336556|gb|EDZ23320.1| flagellin [Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|224999311|gb|ACN78419.1| FljB [Salmonella enterica subsp. enterica]
gi|261247912|emb|CBG25745.1| flagellin [Salmonella enterica subsp. enterica serovar Typhimurium
str. D23580]
gi|267994873|gb|ACY89758.1| flagellin [Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|283825770|gb|ADB43326.1| filament structural protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:-]
gi|301159337|emb|CBW18855.1| flagellin [Salmonella enterica subsp. enterica serovar Typhimurium
str. SL1344]
gi|308054827|gb|ADO01460.1| flagellin [Salmonella enterica subsp. enterica]
gi|321223563|gb|EFX48628.1| Flagellar biosynthesis protein FliC [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323131125|gb|ADX18555.1| flagellin [Salmonella enterica subsp. enterica serovar Typhimurium
str. 4/74]
gi|332989647|gb|AEF08630.1| flagellin [Salmonella enterica subsp. enterica serovar Typhimurium
str. UK-1]
Length = 506
Score = 208 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 70/503 (13%), Positives = 137/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF----------------IRDDNGKVQI 163
++ + FNG L D + A V+
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
T + + + + + ++ F
Sbjct: 184 TAVTTKAYANNGTTLDVSGLDDAAIKAATGGTNGTASVTGGAVKFDADNNKYFVTIGGFT 243
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
A + N D +A A T +P+V ++ +
Sbjct: 244 GADAAKNGDYEVNVATDGTVTLAAGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALI 303
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ + + G + D + S
Sbjct: 304 AGGVDATDANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 344 LNITRHANTDAY-----------------------------------NEKLAMEEMVSFI 368
+ T + E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|291524102|emb|CBK89689.1| Flagellin and related hook-associated proteins [Eubacterium rectale
DSM 17629]
gi|291527860|emb|CBK93446.1| Flagellin and related hook-associated proteins [Eubacterium rectale
M104/1]
Length = 504
Score = 208 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 71/503 (14%), Positives = 145/503 (28%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N A +A++ L +++SSG R++ AAD+AA +I++ M+ L
Sbjct: 2 VVQHNMQAANANRMLNVTTGQQAKSTEKLSSGYRINRAADDAAGLTISEKMRKQIRGLDR 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S V A+ +++ ++ + T TD K+IQ E+ QL +++
Sbjct: 62 ASTNAQDGVSAVQTAEGALTEVHSMLQRMNELATQAANGTNSTTDRKAIQDEVDQLSTEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY---------YL 170
++ + FN L+ D G+ T ++ G N T +
Sbjct: 122 DRVSETTKFNETYLLKGDQGTKTINLEAHDAGLKGTLTNNGDGTATFTMDALKGGDKISI 181
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
+ + +T+ + L + K + + +
Sbjct: 182 GGKQYTIGGTTEQDVKDFLKKNGVEDKADSTFSITSGNKTVTYKYYAAKADVATGGNTTY 241
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVR 290
A A +T A + ++S + A+ +
Sbjct: 242 GYDAGWYNEADAPTTSTTTGDQATVNAKKKDSYEAFATQSGTFTAAGKTLEKATITDANP 301
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE---------------- 334
+ S G + T +
Sbjct: 302 TDGVDDKDSTVISVQKAYELAGKELLKANQIGDTEGHASVKNADDSDLAYNAGNGSFKIN 361
Query: 335 --------------------------IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ +M + ++ A + I
Sbjct: 362 LAQAKVASTLSFNLHVGADADLTNKIQVNIDAMDSASLGIKGLNVNDKNGTAGTYAIDAI 421
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
I ++ +G++ +R+ + + + + R+ D DMA E S
Sbjct: 422 SDAISKVSSQRSSLGAVQNRLEHTINNLDNVVENTTSAESRIRDTDMAKEMVNYSKNNIL 481
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
Q L+ N S +LSL +
Sbjct: 482 AQAGQSMLAQANQSNQGVLSLLQ 504
>gi|38049730|gb|AAR10484.1| phase 2 flagellin [Salmonella enterica]
Length = 506
Score = 208 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 70/503 (13%), Positives = 137/503 (27%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF----------------IRDDNGKVQI 163
++ + FNG L D + A V+
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
T + + + + + ++ F
Sbjct: 184 TAVTTKAYANNGTTLDVSGLDDAAIKAATGGTNGSASVTGGAVKFDADNNKYFVTIGGFT 243
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
A + N D +A A T +P+V ++ +
Sbjct: 244 GADAAKNGDYEVNVATDGTVTLAAGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALI 303
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ + + G + D + S
Sbjct: 304 AGGVDATDANGAELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 344 LNITRHANTDAY-----------------------------------NEKLAMEEMVSFI 368
+ T + E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|285803062|gb|ADC35414.1| flagellin [Salmonella enterica subsp. enterica serovar
Choleraesuis]
Length = 501
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 76/498 (15%), Positives = 145/498 (29%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNTLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI------------------------- 154
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVSD 183
Query: 155 -----RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ K I D + +S + + ++ K D +
Sbjct: 184 TAVAASYSDSKQNIAVPDKTAITAKIGAATSGGAGIKADISFKDGKYYATVSGYDDAADT 243
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
+ + ++ A T + D A +G
Sbjct: 244 DKNGTYEVTVAADTGAVTFATTPTVVDLPTDAKAVSKVQQNDTEIAATNAKAALKAAGVA 303
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + + + GY ++V K G V + +
Sbjct: 304 DAEADTATLVKMSYTDNNGKVIDGGFAFKTSGGYYAASVDKSGAASLKVTSYVDATTGTE 363
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAME----------------EMVSFIDTQIK 373
G T +T T ++ + ID +
Sbjct: 364 KTAANKLGGADGKTEVVTIDGKTYNASKAAGHNFKAQPELAEAAATTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|62180532|ref|YP_216949.1| flagellin [Salmonella enterica subsp. enterica serovar Choleraesuis
str. SC-B67]
gi|224583542|ref|YP_002637340.1| flagellin [Salmonella enterica subsp. enterica serovar Paratyphi C
strain RKS4594]
gi|67476482|sp|P06176|FLIC_SALCH RecName: Full=Flagellin; AltName: Full=Phase 1-C flagellin
gi|38049917|gb|AAR10577.1| phase 1 flagellin [Salmonella enterica]
gi|50830964|gb|AAT81647.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Choleraesuis]
gi|62128165|gb|AAX65868.1| Flagellar synthesis: phase 2 flagellin (filament structural
protein) [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|224468069|gb|ACN45899.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|285803036|gb|ADC35401.1| flagellin [Salmonella enterica subsp. enterica serovar
Choleraesuis]
gi|285803038|gb|ADC35402.1| flagellin [Salmonella enterica subsp. enterica serovar
Choleraesuis]
gi|285803040|gb|ADC35403.1| flagellin [Salmonella enterica subsp. enterica serovar
Choleraesuis]
gi|285803046|gb|ADC35406.1| flagellin [Salmonella enterica subsp. enterica serovar
Choleraesuis]
gi|285803048|gb|ADC35407.1| flagellin [Salmonella enterica subsp. enterica serovar
Choleraesuis]
gi|285803050|gb|ADC35408.1| flagellin [Salmonella enterica subsp. enterica serovar
Choleraesuis]
gi|285803052|gb|ADC35409.1| flagellin [Salmonella enterica subsp. enterica serovar
Choleraesuis]
gi|285803054|gb|ADC35410.1| flagellin [Salmonella enterica subsp. enterica serovar
Choleraesuis]
gi|285803060|gb|ADC35413.1| flagellin [Salmonella enterica subsp. enterica serovar
Choleraesuis]
gi|285803064|gb|ADC35415.1| flagellin [Salmonella enterica subsp. enterica serovar
Choleraesuis]
gi|322715008|gb|EFZ06579.1| flagellin [Salmonella enterica subsp. enterica serovar Choleraesuis
str. A50]
Length = 501
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 76/498 (15%), Positives = 145/498 (29%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI------------------------- 154
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVSD 183
Query: 155 -----RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ K I D + +S + + ++ K D +
Sbjct: 184 TAVAASYSDSKQNIAVPDKTAITAKIGAATSGGAGIKADISFKDGKYYATVSGYDDAADT 243
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
+ + ++ A T + D A +G
Sbjct: 244 DKNGTYEVTVAADTGAVTFATTPTVVDLPTDAKAVSKVQQNDTEIAATNAKAALKAAGVA 303
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + + + GY ++V K G V + +
Sbjct: 304 DAEADTATLVKMSYTDNNGKVIDGGFAFKTSGGYYAASVDKSGAASLKVTSYVDATTGTE 363
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAME----------------EMVSFIDTQIK 373
G T +T T ++ + ID +
Sbjct: 364 KTAANKLGGADGKTEVVTIDGKTYNASKAAGHNFKAQPELAEAAATTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|285803034|gb|ADC35400.1| flagellin [Salmonella enterica subsp. enterica serovar
Choleraesuis]
Length = 501
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 76/498 (15%), Positives = 145/498 (29%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI------------------------- 154
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVSD 183
Query: 155 -----RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ K I D + +S + + ++ K D +
Sbjct: 184 TAVAASYSDSKQNIAVPDKTAITAKIGAATSGGAGIKADISFKDGKYYATVSGYDDAADT 243
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
+ + ++ A T + D A +G
Sbjct: 244 DKNGTYEVTVAADTGAVTFATTPTVVDLPTDAKAVSKVQQNDTEIAATNAKAALKAAGVA 303
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + + + GY ++V K G V + +
Sbjct: 304 DAEADTATLVKMSYTDNNGKVIDGGFAFKTSGGYYAASVDKSGAASLKVTSYVDATTGTE 363
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAME----------------EMVSFIDTQIK 373
G T +T T ++ + ID +
Sbjct: 364 KTAANKLGGADGKTEVLTIDGKTYNASKAAGHNFKAQPELAEAAATTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|285803056|gb|ADC35411.1| flagellin [Salmonella enterica subsp. enterica serovar
Choleraesuis]
Length = 501
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 76/498 (15%), Positives = 145/498 (29%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI------------------------- 154
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVSD 183
Query: 155 -----RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ K I D + +S + + ++ K D +
Sbjct: 184 TAVAASYSDSKQNIAVPDKTAITAKIGAATSGGAGIKADISFKDGKYYATVSGYDDAADT 243
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
+ + ++ A T + D A +G
Sbjct: 244 DKNGTYEVTVAADTGAVTFATTPTVVDLPTDAKAVSKVQQNDTEIAATNAKAALKAAGVA 303
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + + + GY ++V K G V + +
Sbjct: 304 DAEADTATLVKMSYTDNNGKVIDGGFAFKTSGGYYAASVDKSGAASLKVTSYVDATTGTE 363
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAME----------------EMVSFIDTQIK 373
G T +T T ++ + ID +
Sbjct: 364 KTAANKLGGADGKTEVVTIDGKTYNASKAAGHNFKAQPELAEAAATTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 NVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|262223752|gb|ACY38269.1| flagellin [Edwardsiella tarda]
Length = 417
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 74/452 (16%), Positives = 132/452 (29%), Gaps = 41/452 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L L +R+SSGLR++ A D+AA +I+ ++ L+
Sbjct: 4 VINTNSLSLMAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAISNRFTANINGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ D + I+ S SIQ EITQ S++
Sbjct: 64 ASRNANDGISLAQATEGALNEVNDNLQNIRRLTVQAQNGSNSSSDLQSIQDEITQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I++ + FNG L D + A I N Q +D + ++V
Sbjct: 124 DRISQQTDFNGVKVLSKDQKLTIQVGANDGETIDIDLKNINAQSLGLDKFNVADSVDTTK 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + A T+
Sbjct: 184 VAAAAATKVNGPMVNIDTNGKDAGGKAITGYVKDDKGDVYGAYDDAGTTKYAKATIGDDG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
P A TS + + + A
Sbjct: 244 KVTAFDTASATPSGTTNAVSQVTSKVAPKGADAANVYAY--------------------- 282
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + K+ + A +
Sbjct: 283 -----------------TGTEKGASAYVIKEGTGADAKYFKASVAEDGTVTKGSALSTTA 325
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D + +G++ +R + + + + R+ DAD A+E
Sbjct: 326 KTADPLATLDKALSQVDDLRSGLGAVQNRFDSVINNLNSTVNNLSASRSRIQDADYATEV 385
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N ST +LSL R
Sbjct: 386 SNMSRAQILQQAGTSVLAQANQSTQNVLSLLR 417
>gi|38049732|gb|AAR10485.1| phase 2 flagellin [Salmonella enterica]
gi|38049734|gb|AAR10486.1| phase 2 flagellin [Salmonella enterica]
gi|38049742|gb|AAR10490.1| phase 2 flagellin [Salmonella enterica]
gi|38049744|gb|AAR10491.1| phase 2 flagellin [Salmonella enterica]
gi|38049748|gb|AAR10493.1| phase 2 flagellin [Salmonella enterica]
gi|38049766|gb|AAR10502.1| phase 2 flagellin [Salmonella enterica]
gi|38049768|gb|AAR10503.1| phase 2 flagellin [Salmonella enterica]
gi|315633335|gb|ADU54196.1| flagellin [Salmonella enterica subsp. diarizonae serovar
61:c:1,5,(7)]
gi|315633337|gb|ADU54197.1| flagellin [Salmonella enterica subsp. diarizonae serovar
65:c:1,5,7]
gi|315633339|gb|ADU54198.1| flagellin [Salmonella enterica subsp. diarizonae serovar
42:l,v:1,5,7]
Length = 506
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 77/503 (15%), Positives = 142/503 (28%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKS------------------------------- 148
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVKD 183
Query: 149 ---------VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
G+ + + +
Sbjct: 184 TAATTKAYADNGTTLDVSGLDDAAIKAATGGTTGAPTVTGGAVKFDADNNKYFVTIGGFT 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+ + AT + A T Q V A A
Sbjct: 244 GGDAAKNGDYEVNVATDGKVTLATGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALI 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
T+ + + ++ + + G + A Y +T A T Y
Sbjct: 304 AAGVDTTDANAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYNETTGAIKAKTTSYTA 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA-----------YNEKLAMEEMVSFI 368
+ TT + L + T +A+ A E + I
Sbjct: 364 ADGTTKTAANQLGGADGKTEVVTIDGKTYNASKAAGHDFKAQPDLAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|38049921|gb|AAR10579.1| phase 1 flagellin [Salmonella enterica]
Length = 501
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 75/498 (15%), Positives = 145/498 (29%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI------------------------- 154
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVSD 183
Query: 155 -----RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ K I D + ++ + + ++ K D +
Sbjct: 184 TAVAASYSDSKQNIAVPDKTAITAKIGAATTGGAGIKADISFKDGKYYATVSGYDDAADT 243
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
+ + ++ A T + D A +G
Sbjct: 244 DKNGTYEVTVAADTGAVTFATTPTVVDLPTDAKAVSKVQQNDTEIAATNAKAALKAAGVA 303
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + + + GY ++V K G V + +
Sbjct: 304 DAEADTATLVKMSYTDNNGKVIDGGFAFKTSGGYYAASVDKSGAASLKVTSYVDATTGTE 363
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAME----------------EMVSFIDTQIK 373
G T +T T ++ + ID +
Sbjct: 364 KTAANKLGGADGKTEVVTIDGKTYNASKAAGHNFKAQPELAEAAATTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|8895079|gb|AAF80752.1|AF159459_1 flagellin protein FliC [Salmonella enterica]
Length = 501
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 76/498 (15%), Positives = 145/498 (29%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQTANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI------------------------- 154
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVSD 183
Query: 155 -----RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ K I D + +S + + ++ K D +
Sbjct: 184 TAVAASYSDSKQNIAVPDKTAITAKIGAATSGGAGIKADISFKDGKYYATVSGYDDAADT 243
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
+ + ++ A T + D A +G
Sbjct: 244 DKNGTYEVTVAADTGAVTFATTPTVVDLPTDAKAVSKVQQNDTEIAATNAKAALKAAGVA 303
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + + + GY ++V K G V + +
Sbjct: 304 DAEADTATLVKMSYTDNNGKVIDGGFAFKTSGGYYAASVDKSGAASLKVTSYVDATTGTE 363
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAME----------------EMVSFIDTQIK 373
G T +T T ++ + ID +
Sbjct: 364 KTAANKLGGADGKTEVVTIDGKTYNASKAAGHNFKAQPELAEAAATTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|38049915|gb|AAR10576.1| phase 1 flagellin [Salmonella enterica]
Length = 501
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 76/498 (15%), Positives = 145/498 (29%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI------------------------- 154
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVSD 183
Query: 155 -----RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ K I D + +S + + ++ K D +
Sbjct: 184 TAVAASYSDSKQNIAVPDKTAITAKIGAATSGGAGIKADISFKDGKYYATVSGYDDAADT 243
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
+ + ++ A T + D A +G
Sbjct: 244 DKNGTYEVTVAADTGAVTFATRPTVVDLPTDAKAVSKVQQNDTEIAATNAKAALKAAGVA 303
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + + + GY ++V K G V + +
Sbjct: 304 DAEADTATLVKMSYTDNNGKVIDGGFAFKTSGGYYAASVDKSGAASLKVTSYVDATTGTE 363
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAME----------------EMVSFIDTQIK 373
G T +T T ++ + ID +
Sbjct: 364 KTAANKLGGADGKTEVVTIDGKTYNASKAAGHNFKAQPELAEAAATTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|38049927|gb|AAR10582.1| phase 1 flagellin [Salmonella enterica]
Length = 501
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 75/498 (15%), Positives = 144/498 (28%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAHTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI------------------------- 154
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVSD 183
Query: 155 -----RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ K I D + +S + + ++ K D +
Sbjct: 184 TAVAASYSDSKQNIAVPDKAAITAKIGAATSGGAGIKADISFKDGKYYATVSGYDDAADT 243
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
+ + ++ A T + D A +G
Sbjct: 244 DKNGTYEVTVAADTGAVTFATTPTVVDLPTDAKAVSKVQQNDTEIAATNAKAALKAAGVA 303
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + + + GY ++V K G V + +
Sbjct: 304 DAEADTATLVKMSYTDNNGKVIDGGFAFKTSGGYYAASVDKSGAASLKVTSYVDATTGTE 363
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAME----------------EMVSFIDTQIK 373
G T +T T ++ + ID +
Sbjct: 364 KTAANKLGGADGKTEVVTIDGKTYNASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|38049923|gb|AAR10580.1| phase 1 flagellin [Salmonella enterica]
gi|50830882|gb|AAT81606.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Typhisuis]
gi|308054691|gb|ADO01392.1| flagellin [Salmonella enterica subsp. enterica]
Length = 501
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 76/498 (15%), Positives = 145/498 (29%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI------------------------- 154
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVSD 183
Query: 155 -----RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ K I D + +S + + ++ K D +
Sbjct: 184 TAVAASYSDSKQNIAVPDKAAITAKIGAATSGGAGIKADISFKDGKYYATVSGYDDAADT 243
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
+ + ++ A T + D A +G
Sbjct: 244 DKNGTYEVTVAADTGAVTFATTPTVVDLPTDAKAVSKVQQNDTEIAATNAKAALKAAGVA 303
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + + + GY ++V K G V + +
Sbjct: 304 DAEADTATLVKMSYTDNNGKVIDGGFAFKTSGGYYAASVDKSGAASLKVTSYVDATTGTE 363
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAME----------------EMVSFIDTQIK 373
G T +T T ++ + ID +
Sbjct: 364 KTAANKLGGADGKTEVVTIDGKTYNASKAAGHNFKAQPELAEAAATTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|315633341|gb|ADU54199.1| flagellin [Salmonella enterica subsp. diarizonae serovar
60:z52:1,5]
Length = 506
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 80/503 (15%), Positives = 145/503 (28%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKS------------------------------- 148
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 149 ---------VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
G+ + T + T +
Sbjct: 184 TAVTTKAYADNGTTLDASGLDDAAIKAAIGGTTGTAAVTGGTVKFDADNNKYFVTIGGFT 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+ + AT + AA T Q V A A
Sbjct: 244 GADAAKNGDYEVNVATDGKVTLATGATKTTMPAGAATKTEVQELKDTPAVVSADAKNALI 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
T+ + + ++ + + G + A Y +T A T Y
Sbjct: 304 AGGVDTADANAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD-----------AYNEKLAMEEMVSFI 368
+ TT + L + T +A+ A E + I
Sbjct: 364 ADGTTKTAANQLGGADGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|320118621|dbj|BAJ65336.1| flagellin [Actinoplanes missouriensis]
Length = 411
Score = 207 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 65/451 (14%), Positives = 131/451 (29%), Gaps = 47/451 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A +A + L + + +++SSG R++ AAD+AA SI++ ++S G L
Sbjct: 5 INQNIAAQNAYRNLSVTDNQMSKSLEKLSSGFRINRAADDAAGLSISEGLRSQVGGLKVA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S V A+ +++ ++ +++ + Q+E +QL+S++
Sbjct: 65 VRNAQDAISVVQTAEGALNETTSMLQRMRDLAVQANNASLDAEAKNAAQAEFSQLRSEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++ +SF L G++ S D G + + +
Sbjct: 125 RVSDTTSFGKSKLLDGSFGNTQGLSTASPAVLADGDALGIKIDELNGVDVSALDIKASVT 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D V + D N+
Sbjct: 185 ASVNTPAEAGDTTMDSAVADMNKQLSDALKTAGYNGDEITVSAKMDADKKITWQVNSAGG 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
Q + AA + +G +
Sbjct: 245 QTFKTDGTDTTIVAASTSSAARTGATPGD------------------------------- 273
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + S + + + A+
Sbjct: 274 -------------FQIGANADEKLNISIGAVNSQSLGLRGLDLTTAGTAASAGVDAVPSG 320
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
E ++ +D I + K+G+ +R + + + + R+ D DMA E
Sbjct: 321 AEAAITALDKAITTVSDQRAKLGASQNRFEHTINNLNTAVENLSASESRIRDTDMAQEMV 380
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q Q L+ N S+ +LSL R
Sbjct: 381 SFTRNQILTQAGTSMLAQANQSSQGVLSLLR 411
>gi|24306148|gb|AAN52540.1|AF487406_1 flagellin [Edwardsiella tarda]
Length = 416
Score = 207 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 72/452 (15%), Positives = 132/452 (29%), Gaps = 42/452 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L L +R+SSGLR++ A D+AA +I+ ++ L+
Sbjct: 4 VINTNSLSLMAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAISNRFTANINGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ D + I+ S SIQ EITQ S++
Sbjct: 64 ASRNANDGISLAQTTEGALNEVNDNLQNIRRLTVQAQNGSNSSSDLQSIQDEITQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I++ + FNG L D + A I N Q +D + ++V
Sbjct: 124 DRISQQTDFNGVKVLSKDQKLTIQVGANDGETIDIDLKNINAQSLGLDKFNVADSVDTTK 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + I + + D N T
Sbjct: 184 VAAAAPAKVETNIDVAINNDATLKADSKDITGYEQKGADLYAKNTDGKLFKVTTIDNTTG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
T +
Sbjct: 244 KVTGVDTTEYTGGGTTAVTSIKKEVAPTGPDAANLR------------------------ 279
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
Y + + ++ + + A + +
Sbjct: 280 ---------------AYSGTEKGASAYVIQEGTGADAKYFKASVADDGTVTKGSALSTTV 324
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D + +G++ +R + + + + R+ DAD A+E
Sbjct: 325 KTADPLATLDKALSQVDDLRSGLGAVQNRFDSVINNLNSTVNNLSASRSRIQDADYATEV 384
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N ST +LSL R
Sbjct: 385 SNMSRAQILQQAGTSVLAQANQSTQNVLSLLR 416
>gi|27448113|gb|AAO13791.1|AF336929_1 flagellin [Salmonella enterica subsp. enterica serovar Bury]
Length = 501
Score = 207 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 77/498 (15%), Positives = 145/498 (29%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI------------------------- 154
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVSD 183
Query: 155 -----RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ K I D + +S + + ++ K D +
Sbjct: 184 TAVAASYSDSKQNIAVPDKTAITAKIGAATSGGAGIKADISFKDGKYYATVSGYDDAADT 243
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
+ + ++ A T + D A +G
Sbjct: 244 DKNGTYEVTVAADTGAVTFATTPTVVDLPTDAKAVSKVQQNDTEIAATNAKAALKAAGVA 303
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + + + GY ++V K G V + +
Sbjct: 304 DAEADTATLVKMSYTDNNGKVIDGGFAFKTSGGYYAASVDKSGAASLKVTSYVDATTGTE 363
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAME----------------EMVSFIDTQIK 373
G T +T T ++ + ID +
Sbjct: 364 KTAANKLGGADGKTEVVTIDGKTYNASKAAGHNFKAQPELAEAAATTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + RL D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRLEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|291540416|emb|CBL13527.1| Flagellin and related hook-associated proteins [Roseburia
intestinalis XB6B4]
Length = 487
Score = 207 bits (525), Expect = 4e-51, Method: Composition-based stats.
Identities = 72/485 (14%), Positives = 148/485 (30%), Gaps = 37/485 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA A++ L I NL +R+SSGL+++ + DN A +I+ MK+ L+
Sbjct: 3 INYNVSAAIANKHLLGIEDNLSASMERLSSGLKINHSKDNPAGMAISNKMKAQIDGLNRA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA----GVERGTDSKSIQSEITQLQSQL 119
S G S + IA +S+ ++ ++ D ++IQ EIT L+ ++
Sbjct: 63 SQNASDGISVIQIADGALSETTSILQRMRELSVQAASDATMTPADKEAIQKEITSLKDEV 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + +N ++ L L + + + + G+ Q++ V +
Sbjct: 123 DRISTDTEYNSKSLLDGSLDTRVYTKNATRVDISDHVKAGQYQLSIDTAATQAGPVTANQ 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + T G + ++ + + + + A + T
Sbjct: 183 NYNSTAPVGASGTMSINGSKVEIEAADTYAEAFEKIRNAAETGETTVQIDGTSGALSFTA 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR------------------ 281
D+ + + + A G S
Sbjct: 243 DRYGMSSILEIGFDNQQLAAALGFTAFGGNSVVEDPENKGSYVYGQIQNGKVIVPSGTDA 302
Query: 282 ---------------MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
T + G + V T
Sbjct: 303 EVTLTKPSDGTGFGDTATVKTDGNKITVTDRAGFEMSFLADAGYTGKLDFDVTDIGTMAL 362
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + + + ++ D I + ++G+
Sbjct: 363 HIGANEDQETRVRIPEVSCKSLYIDDADVTTVNGAGRGITQFDDAISKVSEVRSRLGAYQ 422
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R+ + + + RL DADMASE T + Q A+ L+ N+ ++
Sbjct: 423 NRLESTVSSLDTFEENMTGAQSRLTDADMASEMTDYTHQNVLNQAAISVLTQANDLPQQV 482
Query: 447 LSLFR 451
L + +
Sbjct: 483 LQILQ 487
>gi|312173301|emb|CBX81556.1| flagellin, filament structural protein FliC [Erwinia amylovora ATCC
BAA-2158]
Length = 483
Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats.
Identities = 74/480 (15%), Positives = 148/480 (30%), Gaps = 31/480 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L +L R+SSGLR++ A D+AA +I+ + ++
Sbjct: 4 VINTNALSLMAQTNLNKSQASLGTAIQRLSSGLRINSAKDDAAGQAISNRFTASIEGMTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVM---STIKNKITAGVERGTDSKSIQSEITQLQSQL 119
+ G S + +++ D + + + G +D KS+Q EIT +++
Sbjct: 64 AARNANDGISLAQTTEGALNEINDNLLNIRRLTEQALNGTNSESDKKSVQEEITARLAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA+ + FNG N L I + D D L S
Sbjct: 124 GRIAKDTDFNGVNVLDGSTSQLQIQIGAKDGQTIGIDLPAMDLEKLGLDGYDVTGALASS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS----TKKFKLATTSGAWLKAA 235
T KV + + +S + L + A +
Sbjct: 184 GAKPTLDAAGNKITLNDKVNAGAEQVTLNASAMSSIEAAVGAGAGDVSLYSVGEAGKETY 243
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
A + + + T+G S + + ++ ++A +
Sbjct: 244 YALDSATGEATEVTLKGDGSGVLATATAGEKLSAVDADILANGPSKLTGEGEVLKAGQEI 303
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
+ VD L D + + + A
Sbjct: 304 DLAGTAHKLTEQDMTDIAAKMGVDAAEMELIGLTDDAGAVKYYAVHTDASGVKTAAEMTL 363
Query: 356 NE------------------------KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ +++ +D+ + + +G++ +R +
Sbjct: 364 TDNAGAITAAKGTALAAADTQKLGELAHGNNGLLATMDSALAQVDSFRSGLGAVQNRFNS 423
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + + R++DAD ++E + +S QQ + LS N +LSL R
Sbjct: 424 IISNLNTTVNNMTEAKSRILDADFSAEVSSMSRANILQQAGITVLSQANQVPQNVLSLLR 483
>gi|1706867|sp|P52615|FLJB_SALAE RecName: Full=Phase 2 flagellin
gi|217069|dbj|BAA02848.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Abortusequi]
Length = 501
Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats.
Identities = 79/498 (15%), Positives = 150/498 (30%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAHTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------------------------- 153
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVSA 183
Query: 154 -----IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+G +T + + T T + ++ K D
Sbjct: 184 TDVISSTYSDGTQALTAPTATDIKAALGNPTVTGDTLTAAVSFKDGKYYATVSGYTDAGD 243
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + ++ A + GA + T D A + P+ A A S
Sbjct: 244 TAKNGKYEVTVDSATGAVSFGATPTKSTVTGDTAVTKVQVNAPVAADAATKKALQDGGVS 303
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + AA+ + + + D Y G + + +
Sbjct: 304 SADASAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTT 363
Query: 329 KDLPK---------------EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
K S + + A E + ID +
Sbjct: 364 KTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|317492398|ref|ZP_07950827.1| flagellin [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919737|gb|EFV41067.1| flagellin [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 436
Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats.
Identities = 67/452 (14%), Positives = 139/452 (30%), Gaps = 22/452 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L +L +R+SSGLR++ A D+AA +I+ ++ L+
Sbjct: 4 VINTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ D + I+ SIQ EITQ S++
Sbjct: 64 ASRNANDGISLAQTTEGALNEVNDNLQNIRRLSVQAQNGSNSDSDLKSIQDEITQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FNG L +D + ++ I + +D + ++ +
Sbjct: 124 NRISEQTDFNGVKVLSSDQKLTIQVGSQDGQTIDIDLKSINASTLGLDGFSVSKSSVQTG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + ++ + S K T + +
Sbjct: 184 DAITSVTGDGTGAPIAVDLKSAATDLGLKDTSNLSLHALKDKNGALTGNYVVKSGNDFYA 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ ++G + + + + + ++ S +
Sbjct: 244 ASLDASTGKVALNKTDVKYTDPSNGLTTAATQAQQLVKIGVDSTGANKGYVTFQGKSYEA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G + K T T
Sbjct: 304 AAGALANGKDKASGNTTAGGTAIDTTLVVSGAGATDTFAGVSS----------------- 346
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + +D + + +G++ +R + + + + R+ DAD A+E
Sbjct: 347 --ADPLKTLDAALSKVDSLRSSLGAVQNRFDSVINNLNSTVNNLTSSQSRIQDADYATEV 404
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S QQ L+ N ST +L+L R
Sbjct: 405 SNMSRANILQQAGTSVLAQANQSTQNVLTLLR 436
>gi|88704297|ref|ZP_01102011.1| phase 2 flagellin [Congregibacter litoralis KT71]
gi|88701348|gb|EAQ98453.1| phase 2 flagellin [Congregibacter litoralis KT71]
Length = 481
Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats.
Identities = 68/464 (14%), Positives = 153/464 (32%), Gaps = 16/464 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++ + L ++ R+SSGLR++ A D+AA +I++ + L+
Sbjct: 18 INTNIPSLTSQRNLNSSQNDVATSLQRLSSGLRINSAKDDAAGLAISERFTAQIRGLNQA 77
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ +++ + + I+ +D +++Q+E+ QL +++
Sbjct: 78 ARNANDGVSLAQTAEGDLAQITNNLQRIRELAVQSANATNSASDREALQAEVDQLTAEID 137
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN--------GKVQITTIDYYLDP 172
+A+ S+FNG N L + + + + D G+ Q +
Sbjct: 138 RVAQQSNFNGVNLLDGSFSAQQFQVGANAGQTITVDSIASARTSSLGQFQGFQLTGQSIG 197
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
++ + T ++ V ++ + + + ATT+
Sbjct: 198 TASDTPAAQNVTIDGDVVSLGTIANDAKAVADALNAANVGFLASANETTVASATTTVTGA 257
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT 292
T ++ AA + + + +
Sbjct: 258 DGDVDTVTVNGLAISVTNTASAASNRDAAVQAINAQSTVTGVIATNDGTGVALSAADGRN 317
Query: 293 TKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANT 352
+ T+ T + + T + A
Sbjct: 318 ITVAFTAGAAATIADYGLAAAATTGASVDITYQAPEGVSGDVTFTDALAGIGTNAIAATG 377
Query: 353 DAYN-----EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
A + ++ ID + ++ +G+I +R ++ + +
Sbjct: 378 TAVAALDIGTVQGSNDAIASIDAALTTINSSRADLGAIQNRFESVVVSLQTSAENLSASR 437
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ DAD A+ES L+ Q QQ + L+ N +L+L +
Sbjct: 438 SRIQDADFAAESANLARAQILQQAGIAVLAQANAQPQNVLALLQ 481
>gi|307138590|ref|ZP_07497946.1| hypothetical protein EcolH7_10745 [Escherichia coli H736]
gi|331642545|ref|ZP_08343680.1| bacterial flagellin N-terminus subfamily [Escherichia coli H736]
gi|331039343|gb|EGI11563.1| bacterial flagellin N-terminus subfamily [Escherichia coli H736]
Length = 420
Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats.
Identities = 68/453 (15%), Positives = 133/453 (29%), Gaps = 39/453 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSESDLSSIQDEIKSRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D + A I + +
Sbjct: 124 DRVSSQTQFNGVNVLAKDGKMNIQVGANDGQTITIDLKKIDSSTLNLSSFDATNLGTSVK 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + L + + D ++ K + F
Sbjct: 184 DGATINKQVAVGAGDFKDKASGSLGTLKLVEKDGKYYVNDTKSSKYYDAEVDTSKGEINF 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ T P + + + + + GN ++ + S
Sbjct: 244 NSTNESGTTPTAATEVTTVGRDVKLDASALKANQSLVVYKDKSGNDAYIIQTKDVTTNQS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
N + A V + S
Sbjct: 304 TFNAANISDAGVLSIGASTTAPSNLTA--------------------------------- 330
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 331 ---DPLKALDDAIASVDKFRSSLGAVQNRLDSAIANLNNTTTNLSEAQSRIQDADYATEV 387
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ L+ N ++LSL +G
Sbjct: 388 SNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 420
>gi|194439566|ref|ZP_03071639.1| flagellin [Escherichia coli 101-1]
gi|301327714|ref|ZP_07220919.1| bacterial flagellin [Escherichia coli MS 78-1]
gi|6941880|gb|AAF32259.1|AF169320_1 flagellin [Escherichia coli]
gi|194421475|gb|EDX37489.1| flagellin [Escherichia coli 101-1]
gi|300845714|gb|EFK73474.1| bacterial flagellin [Escherichia coli MS 78-1]
gi|323972714|gb|EGB67915.1| flagellin [Escherichia coli TA007]
Length = 420
Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats.
Identities = 67/453 (14%), Positives = 129/453 (28%), Gaps = 39/453 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSESDLSSIQDEIKSRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D G + + + D T D +
Sbjct: 124 DRVSSQTQFNGVNVLAKD-GKMNIQVGANDGQTITIDLKKIDSSTLNLSSFDATNLGTSV 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T + K + V +
Sbjct: 183 KDGATINKQVAVGAGDFKDKASGSLGTLKLVEKDGKYYVNDTTNSKYYDAEVDTSKGEIN 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + P S + + Y +D ++ T +
Sbjct: 243 FNSTNESGTPPTAATEVTTVGRDVKLDASALKANQSLVVYKDKSGNDAYIIQTKDVTTNQ 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + T + L
Sbjct: 303 STFNAANISDAGVLSIGASTTAPSNLT--------------------------------- 329
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 330 --ADPLKALDDAIASVDKFRSSLGAVQNRLDSAIANLNNTTTNLSEAQSRIQDADYATEV 387
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ L+ N ++LSL +G
Sbjct: 388 SNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 420
>gi|33590255|gb|AAQ22688.1| flagellin [Escherichia coli]
Length = 420
Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats.
Identities = 68/453 (15%), Positives = 133/453 (29%), Gaps = 39/453 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSESDLSSIQDEIKSRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D + A I + +
Sbjct: 124 DRVSSQTQFNGVNVLAKDGKMNIQVGANDGQTITIDLKKIDSSTLNLSSFDAANLGTSVK 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + L + + D ++ K + F
Sbjct: 184 DGATINKQVAVGAGDFKDKASGSLGTLKLVEKDGKYYVNDTKSSKYYDAEVDTSKGEINF 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ T P + + + + + GN ++ + S
Sbjct: 244 NSTNESGTTPTAATEVTTVGRDVKLDASALKANQSLVVYKDKSGNDAYIIQTKDVTTNQS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
N + A V + S
Sbjct: 304 TFNAANISDAGVLSIGASTTAPSNLTA--------------------------------- 330
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 331 ---DPLKALDDAIASVDKFRSSLGAVQNRLDSAIANLNNTTTNLSEAQSRIQDADYATEV 387
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ L+ N ++LSL +G
Sbjct: 388 SNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 420
>gi|91984619|gb|ABE69176.1| flagellin [Escherichia coli]
Length = 484
Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats.
Identities = 74/484 (15%), Positives = 141/484 (29%), Gaps = 39/484 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 1 INTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQA 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLR 120
S G S + +++ + + I+ SIQ+EITQ ++
Sbjct: 61 SRNANDGISVAQTTEGALNEINNNLQRIRELSVQATNGTNSDSDLSSIQAEITQRLEEID 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR------------------------- 155
++ + FNG L + A I
Sbjct: 121 RVSEQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATGS 180
Query: 156 ------DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
G V D + + + +
Sbjct: 181 DLISKFKATGTDNYQINGTDNYTVNVDSGVVQDKDGKQVYVSTADGSLTTSSDTQFKIDA 240
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
A + G AKG + + + T S
Sbjct: 241 TKLAVAAKDLAQGNKIVYEGIEFTNTGTVAIDAKGNGKLTANVDGKAVEFTISGSTDTSG 300
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + A T + ++ +N + + K G+T K
Sbjct: 301 TSATVAPTTALYKNSAGQLTATKVENKAATLSDLDLNAAKKTGSTLVVNGATYDVSADGK 360
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEK-----LAMEEMVSFIDTQIKCATAAAGKIGS 384
+ + ++ L+ + + NE + + ID + +G+
Sbjct: 361 TITETASGNNKVMYLSKSEGGSPILVNEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGA 420
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
+ +R + + + R+ DAD A+E + +S Q QQ L+ N +T
Sbjct: 421 VQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQTTQ 480
Query: 445 RILS 448
+LS
Sbjct: 481 NVLS 484
>gi|285803044|gb|ADC35405.1| flagellin [Salmonella enterica subsp. enterica serovar
Choleraesuis]
Length = 501
Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats.
Identities = 75/498 (15%), Positives = 146/498 (29%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ +SIQ++ITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLESIQADITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI------------------------- 154
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVSD 183
Query: 155 -----RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ K I D + +S + + ++ K D +
Sbjct: 184 TAVAASYSDSKQNIAVPDKTAITAKIGAATSGGAGIKADISFKDGKYYATVSGYDDAADT 243
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
+ + ++ A T + D A +G
Sbjct: 244 DKNGTYEVTVAADTGAVTFATTPTVVDLPTDAKAVSKVQQNDTEIAATNAKAALKAAGVA 303
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + + + GY ++V K G V + +
Sbjct: 304 DAEADTATLVKMSYTDNNGKVIDGGFAFKTSGGYYAASVDKSGAASLKVTSYVDATTGTE 363
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAME----------------EMVSFIDTQIK 373
G T +T T ++ + ID +
Sbjct: 364 KTAANKLGGADGKTEVVTIDGKTYNASKAAGHNFKAQPELAEAAATTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|56414730|ref|YP_151805.1| flagellin [Salmonella enterica subsp. enterica serovar Paratyphi A
str. ATCC 9150]
gi|197363658|ref|YP_002143295.1| flagellin [Salmonella enterica subsp. enterica serovar Paratyphi A
str. AKU_12601]
gi|56128987|gb|AAV78493.1| Flagellar synthesis: phase 2 flagellin (filament structural
protein) [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197095135|emb|CAR60682.1| Flagellar synthesis: phase 2 flagellin (filament structural
protein) [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
Length = 506
Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats.
Identities = 82/503 (16%), Positives = 148/503 (29%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKS------------------------------- 148
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 149 ---------VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
G+ + T + S T +
Sbjct: 184 TAVTTKAYADNGTTLDASGLDDAAIKAAIGGTTGTAAVTSGTVKFDADNNKYFVTIGGFT 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+ + AT + AA T Q V A A
Sbjct: 244 GADAAKNGDYEVNVATDGKVTLATSATKTTMPAGAATKTEVQELKDTPAVVSADAKNALI 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
T+ + + ++ + + G + A Y +T A T Y
Sbjct: 304 AGGVDTADANAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD-----------AYNEKLAMEEMVSFI 368
+ TT + L + T +A+ A E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|205375057|ref|ZP_03227848.1| flagellin domain-containing protein [Bacillus coahuilensis m4-4]
Length = 497
Score = 206 bits (522), Expect = 7e-51, Method: Composition-based stats.
Identities = 70/495 (14%), Positives = 152/495 (30%), Gaps = 47/495 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++L N +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTYRQLDSANNAGAKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ D IQ+E+ +L ++
Sbjct: 63 QRNSQDGISMIQTAEGALNETHSILQRMRELSVQSANDTQTEDDRSKIQAEVDELAKEVT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN +N + L ++ A ++ + + + + T+ +
Sbjct: 123 RISNDTEFNTQNLMAGGLDNTFHIGANQGQSINLKINAMDAKSLGVAGFETTATINSSNV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
Q D + +T + S A N
Sbjct: 183 GIEKVEMDRTTGTSMGNGTTQSFTVSDTAAKTQWNGGATGLTGMTIESSANSSKYNDYKF 242
Query: 241 QAKGIATIPVP--------------------------------------------LPAAP 256
+ K I ++
Sbjct: 243 EVKQIGAGATTAASINESSKTITLSLASDHATAVTAVEVNAAFTTAGIGDLTAGSTDSSA 302
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
+ + S S++ + + G S I TK + S + V T
Sbjct: 303 GGNSAQAAASASQAGLASDELKFTMNGESVIVKEDATKVAFNSTANKGVTLVKDSAVTTA 362
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
+ + + D + A + + + E ++ I+ I +
Sbjct: 363 AGFSGTNSFDVSVSSSSAAVLNADGTVKDKALAAVGLDVSTQSSANEAITKINDAITTVS 422
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
K+G+ +R+ + + + + R+ D DMA E + Q + L
Sbjct: 423 EERSKLGAYQNRLEHTINNLSTSSENLTAAESRIRDVDMAKEMMNQTKESILAQASQAML 482
Query: 437 SIVNNSTARILSLFR 451
+ N + +L L R
Sbjct: 483 AKANQAPQGVLQLLR 497
>gi|121611311|ref|YP_999118.1| flagellin domain-containing protein [Verminephrobacter eiseniae
EF01-2]
gi|121555951|gb|ABM60100.1| flagellin domain protein [Verminephrobacter eiseniae EF01-2]
Length = 501
Score = 206 bits (522), Expect = 7e-51, Method: Composition-based stats.
Identities = 74/500 (14%), Positives = 158/500 (31%), Gaps = 51/500 (10%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I TN ++++A + L +L R+SSGLR++ A D+AA +I++ S L+
Sbjct: 3 SIINTNIASLTAQRNLGLSQSSLNTSIQRLSSGLRINSAKDDAAGLAISERFSSQIRGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S + + + D++ ++ +D +++Q+E++QL S+
Sbjct: 63 QAVRNANDGISLAQTTEGALKSSGDILQRVRELAVQSANATNSSSDRQALQAEVSQLVSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA+ + FNG + G+ + + + + + + +
Sbjct: 123 LDRIAQTTEFNGAKLIDGSFGTQPFQVGANANQTIVAATANLRTSRYGNNQ-NTSSNGAG 181
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
S + + + V +A+ +T L T + +A
Sbjct: 182 VSAATAAWGTNGVTTGTLAINGALGSANIVVTDNATAKATTDMINLQTANTGVTASARTE 241
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ G + P+ + + T+K +T
Sbjct: 242 VELGFGAVGAYTLQLRSDNTPSGAALGQAISFSVANTATADGLSNAVSAINEQTSKTGVT 301
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS--------------------- 337
+ +N+ V T + D+ +
Sbjct: 302 AALNASNNRVVLTNATGQDIGLYRAETDATNVGVITVQKLQADGSAVGAAATITTDTAAQ 361
Query: 338 --------------------------GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ + R E + +D
Sbjct: 362 SATVSGYVVLDSDKSFSTTATTTNAFNTTAAPASSLREVAGLDVTTFKKATEALKTVDAG 421
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ + K+G++ SR D +++ + + R++DAD A+E+ LS Q QQ
Sbjct: 422 LAFINSQRAKLGALQSRFETSIDNLQVTSENLSASRSRILDADFAAETANLSRAQILQQA 481
Query: 432 AVQALSIVNNSTARILSLFR 451
++ N +L+L R
Sbjct: 482 GTAMVAQANQLPQSVLALLR 501
>gi|326319077|ref|YP_004236749.1| flagellin domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323375913|gb|ADX48182.1| flagellin domain protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 492
Score = 206 bits (522), Expect = 7e-51, Method: Composition-based stats.
Identities = 77/490 (15%), Positives = 156/490 (31%), Gaps = 40/490 (8%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I TN S+++A + L +L R+SSGLR++ A D+AA +I++ S ++
Sbjct: 3 STINTNISSLTAQRNLSLSQSSLNTSIQRLSSGLRINSAKDDAAGLAISERFTSQIRGMN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S +A++ ++ A +++ ++ D K+IQ+E+ QL S+
Sbjct: 63 QAARNANDGISLSQVAESALAGAGNILQRVRELSVQSANATNSAGDRKAIQAEVGQLLSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT------------- 165
L IA + FNG+ L GS+T + + + +
Sbjct: 123 LDRIAGTTEFNGQKLLDGSFGSATFQVGANANQTITATTGNFRTMNYGAQLTASASGAAT 182
Query: 166 ------------------------IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
++ + S+ + + + + E +
Sbjct: 183 TGASAGSAGAAAGTVVIAGLQTKTVNVAASGTAADIASAVNAVADSTGVTASARNVSELK 242
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
+ S+ + T+ + +++ +
Sbjct: 243 FSGNGSFSLAVKGENTTAANVTFNVTANSSAAGLAEAVKAFNDVSSQTGITAKLNSDNTG 302
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
T+ S A+ G + AT S T + E
Sbjct: 303 LILTNESGKDINIANGAGSAAGITLASQDATQTLSTGDLTFTTATAAGTGTTVASRGTVE 362
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ + T + + +T + + ID +
Sbjct: 363 YNSDKGYTVSGTGDTMTTTTATTSSMKSVSTIDVSTVDGSTRALKIIDAALSAVNGQRAS 422
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
G++ SR + + + R+ DAD ASE+ LS Q QQ ++ N
Sbjct: 423 FGALQSRFETAIANLNTSSENMSASRSRIQDADFASETANLSRAQILQQAGTAMVAQANQ 482
Query: 442 STARILSLFR 451
+LSL +
Sbjct: 483 LPQGVLSLLK 492
>gi|156523027|dbj|BAF76033.1| flagellin [Edwardsiella tarda]
gi|156523029|dbj|BAF76034.1| flagellin [Edwardsiella tarda]
Length = 416
Score = 206 bits (522), Expect = 7e-51, Method: Composition-based stats.
Identities = 72/452 (15%), Positives = 130/452 (28%), Gaps = 42/452 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L L +R+SSGLR++ A D+AA +I+ ++ L+
Sbjct: 4 VINTNSLSLMAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAISNRFTANINGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ D + I+ S SIQ EITQ S++
Sbjct: 64 ASRNANDGISLAQTTEGALNEVNDNLQNIRRLSVQAQNGSNSSSDLQSIQDEITQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I++ + FNG L D + A I N Q +D + ++V
Sbjct: 124 DRISQQTDFNGVKVLSKDQKLTIQVGANDGETIDIDLKNINAQSLGLDKFNVADSVDTTK 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + I +P + T
Sbjct: 184 VAAAAPAKVKTNVDVAITNDPALKAGGKDIASYEQKGDDLYAKNADGKLFKVTTIDTTTG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
AT +
Sbjct: 244 KATAIDATEYTAGGTTAVTSIKKEVAPTGPEAANVR------------------------ 279
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
Y + + ++ + A +
Sbjct: 280 ---------------AYTGTEKGASAYVIQEGTGADAKYFKASVAEDGTVTKGSALSTTA 324
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D + +G++ +R + + + + R+ DAD A+E
Sbjct: 325 KTADPLATLDKALSQVDDLRSGLGAVQNRFDSVINNLNSTVNNLSASRSRIQDADYATEV 384
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N ST +LSL R
Sbjct: 385 SNMSRAQILQQAGTSVLAQANQSTQNVLSLLR 416
>gi|30059862|gb|AAP13303.1| FliC [Escherichia coli]
gi|323961972|gb|EGB57571.1| flagellin [Escherichia coli H489]
Length = 420
Score = 206 bits (522), Expect = 7e-51, Method: Composition-based stats.
Identities = 68/453 (15%), Positives = 132/453 (29%), Gaps = 39/453 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSESDLSSIQDEIKSRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D + A I + +
Sbjct: 124 DRVSSQTQFNGVNVLAKDGKMNIQVGANDGQTITIDLKKIDSSTLNLSSFDATNLGTSVK 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + L + + D ++ K + F
Sbjct: 184 DGATINKQVAVGAGDFKDKASGSLGTLKLVEKDGKYYVNDTKSSKYYDAEVDTSKGKINF 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ T P + + + + + GN ++ + S
Sbjct: 244 NSTNESGTTPTAATEVTTVGRDVKLDASALKANQSLVVYKDKSGNDAYIIQTKDVTTNQS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
N + A V + S
Sbjct: 304 TFNAANISDAGVLSIGASTTAPSNLTA--------------------------------- 330
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 331 ---NPLKALDDAIASVDKFRSSLGAVQNRLDSAIANLNNTTTNLSEAQSRIQDADYATEV 387
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ L+ N ++LSL +G
Sbjct: 388 SNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 420
>gi|285803058|gb|ADC35412.1| flagellin [Salmonella enterica subsp. enterica serovar
Choleraesuis]
Length = 501
Score = 206 bits (522), Expect = 8e-51, Method: Composition-based stats.
Identities = 75/498 (15%), Positives = 145/498 (29%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G + + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGITIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI------------------------- 154
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVSD 183
Query: 155 -----RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ K I D + +S + + ++ K D +
Sbjct: 184 TAVAASYSDSKQNIAVPDKTAITAKIGAATSGGAGIKADISFKDGKYYATVSGYDDAADT 243
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
+ + ++ A T + D A +G
Sbjct: 244 DKNGTYEVTVAADTGAVTFATTPTVVDLPTDAKAVSKVQQNDTEIAATNAKAALKAAGVA 303
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + + + GY ++V K G V + +
Sbjct: 304 DAEADTATLVKMSYTDNNGKVIDGGFAFKTSGGYYAASVDKSGAASLKVTSYVDATTGTE 363
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAME----------------EMVSFIDTQIK 373
G T +T T ++ + ID +
Sbjct: 364 KTAANKLGGADGKTEVVTIDGKTYNASKAAGHNFKAQPELAEAAATTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|74474901|dbj|BAE44435.1| antigenic protein Et 46 [Edwardsiella tarda]
Length = 416
Score = 206 bits (522), Expect = 8e-51, Method: Composition-based stats.
Identities = 75/452 (16%), Positives = 136/452 (30%), Gaps = 42/452 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L L +R+SSGLR++ A D+AA +I+ ++ L+
Sbjct: 4 VINTNSLSLMAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAISNRFTANINGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ D + I+ S SIQ EITQ S++
Sbjct: 64 ASRNANDGISLAQTTEGALNEVNDNLQNIRRLTVQAQNGSNSSSDLQSIQDEITQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I++ + FNG L D + A I N Q +D + ++V
Sbjct: 124 DRISQQTDFNGVKVLSKDQKLTIQVGANDGETIDIDLKNINAQSLGLDKFNVADSVDTTK 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + I + + D N T
Sbjct: 184 VAAAAPAKVKTNIDVAINNDATLKADSKDITGYEQKGADLYAKNTDGKLFKVTTIDNTTG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
T + + + + I G S ++ T
Sbjct: 244 KVTGVDTTEYTGGGTTAVTSIKKEVAPTGPAAANLRAYSGIEKGASAYVIQEGTGRDAKY 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + A + +
Sbjct: 304 ---------------------------------------FKASVADDGTVTKGSALSTTV 324
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D + +G++ +R + + + + R+ DAD A+E
Sbjct: 325 KTADPLATLDKALSQVDDLRSGLGAVQNRFDSVINNLNSTVNNLSASRSRIQDADYATEV 384
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N ST +LSL R
Sbjct: 385 SNMSRAQILQQAGTSVLAQANQSTQNVLSLLR 416
>gi|332343650|gb|AEE56984.1| Flagellin protein FliC [Escherichia coli UMNK88]
Length = 420
Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats.
Identities = 67/453 (14%), Positives = 129/453 (28%), Gaps = 39/453 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNAYDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSESDLSSIQDEIKSRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D G + + + D T D +
Sbjct: 124 DRVSSQTQFNGVNVLAKD-GKMNIQVGANDGQTITIDLKKIDSSTLNLSSFDATNLGTSV 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T + K + V +
Sbjct: 183 KDGATINKQVAVGAGDFKDKASGSLGTLKLVEKDGKYYVNDTTNSKYYDAEVDTSKGEIN 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + P S + + Y +D ++ T +
Sbjct: 243 FNSTNESGTPPTAATEVTTVGRDVKLDASALKANQSLVVYKDKSGNDAYIIQTKDVTTNQ 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + T + L
Sbjct: 303 STFNAANISDAGVLSIGASTTAPSNLT--------------------------------- 329
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 330 --ADPLKALDDAIASVDKFRSSLGAVQNRLDSAIANLNNTTTNLSEAQSRIQDADYATEV 387
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ L+ N ++LSL +G
Sbjct: 388 SNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 420
>gi|291537183|emb|CBL10295.1| Flagellin and related hook-associated proteins [Roseburia
intestinalis M50/1]
Length = 487
Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats.
Identities = 73/485 (15%), Positives = 148/485 (30%), Gaps = 37/485 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA A++ L I NL +R+SSGL+++ + DN A +I+ MK+ L+
Sbjct: 3 INYNVSAAIANKHLLGIEDNLSASMERLSSGLKINHSKDNPAGMAISNKMKAQIDGLNRA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA----GVERGTDSKSIQSEITQLQSQL 119
S G S + IA +S+ ++ ++ D ++IQ EIT L+ ++
Sbjct: 63 SQNASDGISVIQIADGALSETTSILQRMRELSVQAASDATMTPADKEAIQKEITSLKDEV 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + +N + L L + + + + G+ Q++ V +
Sbjct: 123 DRISTDTEYNSKTLLDGSLDTRVYTKNATRVDISDHVKAGQYQLSIDTAATQAGPVTANQ 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + T G + ++ + + + + A + T
Sbjct: 183 NYNSTAPVGASGTMSINGSKVEIEAADTYAEAFEKIRNAAEAGETTVQIDGTSGALSFTA 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR------------------ 281
D+ + + + A SG S
Sbjct: 243 DRYGMSSILEIGFDNQQLAAALGFTASGGNSVVEDPENKGSYVYGQIQNGKVIVPSGTDA 302
Query: 282 ---------------MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
T + G + V T
Sbjct: 303 EVTLTKPSDGTGFGDTATVKTDGNKITVTDRAGFEMSFLADAGYTGKLDFDVTDIGTMAL 362
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + + + ++ D I + ++G+
Sbjct: 363 HIGANEDQETRVRIPEVSCKSLYIDDADVTTVNGAGRGITQFDDAISKVSEVRSRLGAYQ 422
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R+ + + + RL DADMASE T + Q A+ L+ N+ ++
Sbjct: 423 NRLESTVSSLDTFEENMTGAQSRLTDADMASEMTDYTHQNVLNQAAISVLTQANDLPQQV 482
Query: 447 LSLFR 451
L + +
Sbjct: 483 LQILQ 487
>gi|225375130|ref|ZP_03752351.1| hypothetical protein ROSEINA2194_00754 [Roseburia inulinivorans DSM
16841]
gi|225213004|gb|EEG95358.1| hypothetical protein ROSEINA2194_00754 [Roseburia inulinivorans DSM
16841]
Length = 493
Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats.
Identities = 81/491 (16%), Positives = 160/491 (32%), Gaps = 43/491 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ +++L NL +R+SSGL+++ A DN A +I+ M++ AL
Sbjct: 3 INNNMSAVITNKQLLRTENNLTKSMERLSSGLKINHAKDNPAGMAISNKMQAQIDALDRA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G+S + IA +++ ++ ++ D ++IQ EI L+ ++
Sbjct: 63 SSNASDGTSVLQIADGALNETSAILQRMRELSVQAANGTNSLEDKQAIQDEIEALKDEVN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTI-------------- 166
I++ + +N ++ L L + + +V + D +
Sbjct: 123 RISKDTEYNSKSLLDGSLDTRVYTDNANVSRVNVSDYVNPGKYEINIKTAATKATDTATD 182
Query: 167 ---------------DYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
++ +V +D++ E Y + ++ D +
Sbjct: 183 VGINSTGTGAIGASGTISINGSSVDIDANDTMAEVYEKIRAAAEVGEAEMKTDDGTFTGL 242
Query: 212 DASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
AS S+ + + + + + +
Sbjct: 243 QASRYGSSAALVITFSGKEGVSTTKDFATALGYTTDLTTDAKTGTMTYDAAKAGNSGTDA 302
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITS-----------DPGYTNSTVAKVGNTHYYVDT 320
V S + G +D + + T T + K G T + V
Sbjct: 303 EVELSVGKVIAGTTDTSIFSNTATVATDGNRVTITDRDGFSMSFLAKEGKTGKTVFDVTD 362
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
+ T + + + +S +D I + A
Sbjct: 363 IGNMTLHIGANEHQNMDVRIQEISCETLYIDDLDVTTVTGADRAISALDDAIAMVSDARS 422
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
KIG+ +R+ + + + + RL D DMA E T + QQ V LS N
Sbjct: 423 KIGAYENRLEYATSSLDTFEENMTDAMSRLTDVDMAEEMTNYTQYNVLQQAGVSVLSQAN 482
Query: 441 NSTARILSLFR 451
+ +LSL +
Sbjct: 483 DLPQNVLSLLQ 493
>gi|285803042|gb|ADC35404.1| flagellin [Salmonella enterica subsp. enterica serovar
Choleraesuis]
Length = 501
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 76/498 (15%), Positives = 146/498 (29%), Gaps = 49/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ +L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNQLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI------------------------- 154
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVSD 183
Query: 155 -----RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ K I D + +S + + ++ K D +
Sbjct: 184 TAVAASYSDSKQNIAVPDKTAITAKIGAATSGGAGIKADISFKDGKYYATVSGYDDAADT 243
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
+ + ++ A T + D A +G
Sbjct: 244 DKNGTYEVTVAADTGAVTFATTPTVVDLPTDAKAVSKVQQNDTEIAATNAKAALKAAGVA 303
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + + + GY ++V K G V + +
Sbjct: 304 DAEADTATLVKMSYTDNNGKVIDGGFAFKTSGGYYAASVDKSGAASLKVTSYVDATTGTE 363
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAME----------------EMVSFIDTQIK 373
G T +T T ++ + ID +
Sbjct: 364 KTAANKSGGADGKTEVVTIDGKTYNASKAAGHNFKAQPELAEAAATTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 484 SVLAQANQVPQNVLSLLR 501
>gi|269139475|ref|YP_003296176.1| putative flagellin associated protein [Edwardsiella tarda EIB202]
gi|156523025|dbj|BAF76032.1| flagellin [Edwardsiella tarda]
gi|165974066|dbj|BAF99062.1| flagellin [Edwardsiella tarda]
gi|267985136|gb|ACY84965.1| putative flagellin associated protein [Edwardsiella tarda EIB202]
gi|304559368|gb|ADM42032.1| Flagellar biosynthesis protein [Edwardsiella tarda FL6-60]
Length = 416
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 73/452 (16%), Positives = 134/452 (29%), Gaps = 42/452 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L L +R+SSGLR++ A D+AA +I+ ++ L+
Sbjct: 4 VINTNSLSLMAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAISNRFTANINGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ D + I+ S SIQ EITQ S++
Sbjct: 64 ASRNANDGISLAQTTEGALNEVNDNLQNIRRLTVQAQNGSNSSSDLQSIQDEITQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I++ + FNG L D + A I N Q +D + ++V
Sbjct: 124 DRISQQTDFNGVKVLSKDQKLTIQVGANDGETIDIDLKNINAQSLGLDKFNVADSVDTTK 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + I + + D N T
Sbjct: 184 VAAAAPAKVKTNIDVAINNDATLKADSKDITGYEQKGADLYAKNTDGKLFKVTTIDNTTG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
T + + + I G
Sbjct: 244 KVTGVDTTEYTGGGTTAVTSIKKEVAPTGPDAANLRAYSGIEKGA--------------- 288
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ ++ + + A + +
Sbjct: 289 ------------------------SAYVIQEGTGADAKYFKASVADDGTVTKGSALSTTV 324
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D + +G++ +R + + + + R+ DAD A+E
Sbjct: 325 KTADPLATLDKALSQVDDLRSGLGAVQNRFDSVINNLNSTVNNLSASRSRIQDADYATEV 384
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N ST +LSL R
Sbjct: 385 SNMSRAQILQQAGTSVLAQANQSTQNVLSLLR 416
>gi|32490813|ref|NP_871067.1| hypothetical protein WGLp064 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166019|dbj|BAC24210.1| fliC [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 421
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 67/456 (14%), Positives = 130/456 (28%), Gaps = 40/456 (8%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M+ I TN +++A L L R+SSGLR++ + D+AA +I+ S
Sbjct: 1 MSHVINTNILSITAQNNLNKSQSYLNTSIQRLSSGLRINSSKDDAAGQAISNRFTSLING 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI----QSEITQL 115
L + G + A+ +++ + M I+ + SK+ Q EI +
Sbjct: 61 LGQAARNANDGIAVSQTAEGAINEINENMHAIRRLTVQIKSTASVSKADKKSIQDEIKKR 120
Query: 116 QSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
S++ ++ + FNG L D A I + I +
Sbjct: 121 LSEIDRLSDQTEFNGMKILSEDQDLVVQIGANDGQVVRINLFKLNTEALKIKNFNVNSDS 180
Query: 176 LLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
L S + + + + FK + + +
Sbjct: 181 LYSSDILEDDVKSVKVGIEIKSTVDSSSATKNEVQRQLYESKGEYFFKQVNGNEYYKASE 240
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
+ A ++ P L AP + + + + +
Sbjct: 241 ISKDGVATYDSSSPATLDEAPKLAKKAQISIDVDEKYLGIGESIKAYVKDGVQNYLISSE 300
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
+ S L
Sbjct: 301 EDGEKVYREAIINSSGEIRKGSELNFSMFLT----------------------------- 331
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + ID I G +G+ +R+ + + + + ++DAD
Sbjct: 332 ------MDPLKEIDNAIAKIDDIRGSLGATQNRLSSVINSLSTTIANLTQSRSNILDADF 385
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+E + ++ QQ L+ N IL+L R
Sbjct: 386 ATEVSNMNRANILQQAGTAVLAQANAVPQNILALLR 421
>gi|293415234|ref|ZP_06657877.1| flagellin [Escherichia coli B185]
gi|291432882|gb|EFF05861.1| flagellin [Escherichia coli B185]
Length = 420
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 66/453 (14%), Positives = 128/453 (28%), Gaps = 39/453 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSESDLSSIQDEIKSRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D G + + + D T D +
Sbjct: 124 DRVSSQTQFNGVNVLAKD-GKMNIQVGANDGQTITIDLKKIDSSTLNLSSFDATNLGTSV 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T + K + V +
Sbjct: 183 KDGATINKQVAVGAGDFKDKASGSLGTLKLVEKDGKYYVNDTTNSKYYDAEVDTSKGEIN 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + S + + Y +D ++ T +
Sbjct: 243 FNSTNESGTTPTAATEVTTVGRDVKLDASALKANQSLVVYKDKSGNDAYIIQTKDVTTNQ 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + T + L
Sbjct: 303 STFNAANISDAGVLSIGASTTAPSNLT--------------------------------- 329
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 330 --ADPLKALDDAIASVDKFRSSLGAVQNRLDSAIANLNNTTTNLSEAQSRIQDADYATEV 387
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ L+ N ++LSL +G
Sbjct: 388 SNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 420
>gi|114331800|ref|YP_748022.1| flagellin domain-containing protein [Nitrosomonas eutropha C91]
gi|114308814|gb|ABI60057.1| flagellin domain protein [Nitrosomonas eutropha C91]
Length = 491
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 70/488 (14%), Positives = 148/488 (30%), Gaps = 39/488 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++++ + L L R+SSGLR++ A D+AA +I++ M S L+
Sbjct: 4 VINTNVASLNSQRNLNSSQNALSTSLQRLSSGLRINSAKDDAAGLAISERMTSQIRGLNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S A+ + + + + I+ +D ++Q+E+ QL S++
Sbjct: 64 AARNANDGISLAQTAEGALGEIGNNLQRIRELAVQSSNATNSASDRAAMQAEVAQLTSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG N L S I + + G + + + +
Sbjct: 124 TRVAGQTQFNGLNLLDGSFASQNFQIGANANQTISVSQIGDARASALGSNVLSTGGSHMG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI---------------------- 217
+ + L A
Sbjct: 184 QAITAGTAVPTGAAAVVATDNFTLTTAQGGTTAAIIYDVSAGANGIAAAINSAGTDVGLS 243
Query: 218 --------------STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTS 263
+ A+ A A V +A
Sbjct: 244 AVATNSATLGKLASAGTVSLTLNDQAISANVASTGDLSALAAAINGVAGTTGVSASFANP 303
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
+ S + ++ T + + A +
Sbjct: 304 SNLSEITLSTTDGRDIRILDFNNSGTTKTIDVKGINGVAVELTGGADDSTRVVGNVDVYS 363
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+ + ++ S + ++ + + + +D ++ ++ G +G
Sbjct: 364 SKGAITAAAANAEAFVSATATSSFSAVSSVSVASATGAQSAIRVLDEALQQINSSRGDLG 423
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
++ +R ++ + + R+ DAD A+E+ L+ Q QQ V L+ N+
Sbjct: 424 ALQNRFSSVITNLQTTSENLSASRSRIQDADFAAETAALTRAQIMQQAGVAMLAQANSLP 483
Query: 444 ARILSLFR 451
+LSL R
Sbjct: 484 NNVLSLLR 491
>gi|168335504|ref|ZP_02693585.1| flagellin domain protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 411
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 54/450 (12%), Positives = 135/450 (30%), Gaps = 45/450 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A+++ + L V +++SSGLR++ A D+AA +I++ M++ L
Sbjct: 3 INTNLMAINSQRNLGINQGEQGSVMEKLSSGLRINRAGDDAAGLAISEKMRNQIKGLQQS 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ +++ ++ + D + + E QL ++
Sbjct: 63 SRNAEDGISLIQTAEGALAETHEMLKRMREMAIQSMNDTYTDEDREKLNLETQQLITEXD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++A + FN + L D + S + +++
Sbjct: 123 ELAVKAEFNEQKLLTGDPTGTGLKSVADKNKSLADALRVYYSAVGTYESVLGMAYSVEAQ 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + +V + +++ + AA
Sbjct: 183 LPLQIALQSVIDLEQKISALEVKASGESPAESQKVLTDVSNLRISLAALNASIAAIEATA 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ A + + S ++
Sbjct: 243 AEYKEMAASYDIKAISIEAGLVTSVAKSLQATMNEKVGPNEFTFQVGA------------ 290
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + I + + +
Sbjct: 291 ------------------------------NNGQTITLAIKAMDAIALGLSATKIDSPES 320
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ID ++ + ++G++ +R+ + + ++ ++ DADMA+E
Sbjct: 321 SGIALTTIDAAVEIVSRQRAELGAVQNRLEHTVKNLNNTAENLQSAESQIRDADMAAEMV 380
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + Q + L+ N ++IL L
Sbjct: 381 DFTRINILSQASQAMLAQANQIPSQILQLL 410
>gi|168335507|ref|ZP_02693588.1| flagellin domain protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 412
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 59/450 (13%), Positives = 141/450 (31%), Gaps = 44/450 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A+++ + L + + +++SSGLR++ A D+AA +I++ M++ L
Sbjct: 3 INTNLMAINSQRNLTINQGDQGSIMEKLSSGLRINRAGDDAAGLAISEKMRNQIKGLQQS 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + + + + +++ ++ + D K + E+ QL +++
Sbjct: 63 SSNAQDGISLIQTTEGALGETHEMLKRMREMSIQSMNDTYTSEDRKKLDIELKQLITEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + L D + S S +D
Sbjct: 123 GIADKTEFNEQKLLTGDPTGKGLDLVASARTSLTNAVGTYYDKVAEYQGKLAAAYSIDGG 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + ++ +A +++ K + A +
Sbjct: 183 SSMADLENRVLDLEQEISALEIKAAGASDETEAQKILASVAGKQVSLEKTKASLAFVESE 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A A+ L +A +T +K + + +
Sbjct: 243 SAALKASASDILKSAVKLEQSTVVEKANKLQATMNQEVGPNEFTFQVGANNDQSIQLNIK 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ +
Sbjct: 303 -----------------------------------------AMNVTALGLTATKIDTPES 321
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ID ++ + ++G++ +R+ + + ++ ++ DADMA+E
Sbjct: 322 ANIALNSIDAAVEIVSRQRAELGAVQNRLEHTVKSLDNTAENLQSAESQIRDADMAAEMV 381
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
L+ + Q + L+ N + ++L L
Sbjct: 382 NLTRVNILAQASQSMLAQANQAPQQVLQLL 411
>gi|89899442|ref|YP_521913.1| flagellin-like protein [Rhodoferax ferrireducens T118]
gi|89344179|gb|ABD68382.1| flagellin-like [Rhodoferax ferrireducens T118]
Length = 471
Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 71/471 (15%), Positives = 144/471 (30%), Gaps = 20/471 (4%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I TN ++++A + L +L R+SSGLR++ A D+AA +I++ M +
Sbjct: 1 MSVINTNINSLTAQRNLGMSQASLATSMQRLSSGLRINSAKDDAAGLAISERMTTQIRGS 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ + G S A+ +++ + + ++ +D ++ E+ L +
Sbjct: 61 NQAARNANDGISLAQTAEGDLAQIGNNLQRMRELAVQSANATNSSSDRAALDGEVQALSA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +++ SSFNG L + + + + T T
Sbjct: 121 EIDRVSQNSSFNGTKLLDGSFTAQKFQVGANNTANDSITVASIGSARTSVLGGYTTTKAG 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+T L + + S + + A +A
Sbjct: 181 GVTTAALTAGALTLNGTSVGASAATSIPGQSASSAYSIAAAINAVSGQSGVTATAQATAV 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNT-----------------TSGTSGSKSPSVAASATYI 280
T I + S V ASA
Sbjct: 241 TGAVQTAFTAITTGATLTVNGIQVGSIAAGGAAPAQGANVAAAINLVSSQSGVTASAAAD 300
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+ T + +D+ S+ + +
Sbjct: 301 GKVTLTAADGRDIALGAGWVAADSGLTASATTVGTVTLDSTSSAGITIAGTAPASAGFTA 360
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
TL ++ A + ID + +A+ +G+ +R ++
Sbjct: 361 GTTLATATKISSMNVLTAAAATAALGTIDGALSTVSASRASLGAYQNRFTSVVTSLQTTS 420
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R+ DAD A+E+ LS Q QQ ++ N +L+L R
Sbjct: 421 ENLSASRSRIQDADFAAETANLSRAQVLQQAGTAMVAQANQLPQGVLALLR 471
>gi|254516997|ref|ZP_05129055.1| flagellin [gamma proteobacterium NOR5-3]
gi|219674502|gb|EED30870.1| flagellin [gamma proteobacterium NOR5-3]
Length = 471
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 69/467 (14%), Positives = 162/467 (34%), Gaps = 19/467 (4%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++ + L ++ R+SSGLR++ A D+AA +I++ + L+
Sbjct: 5 INTNIPSLNSQRNLNSSQNDVATSLQRLSSGLRINSAKDDAAGLAISERFTAQIRGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ +++ + + I+ +D ++Q+E+ +L +++
Sbjct: 65 ARNANDGISLAQTAEGDLAQITNNLQRIRELAVQSANATNSASDRTALQAEVDELVAEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN-GKVQITTIDYYLDPETVLLDS 179
+A+ S+FNG + L + + + + + + + + T +
Sbjct: 125 RVAQQSNFNGVSLLDGNFSAQQFQVGANAGQTITVESIASARASSLGQFSGFQLTNVAVD 184
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + ++ + + A+ ++ LA+ + A A
Sbjct: 185 SPSAPGDAAVTQQVVIDGETIELGDTANDAKALAAALNASGAGFLASADATTVTTAQAGA 244
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G T+ + A T + T+ S + + + + + T +
Sbjct: 245 VTTAGSVTVDINGREITIAATTDATTNRSNAVEAINAQSSVTGVTATDTGAGVTLTAADG 304
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
S A + + + +DS T +
Sbjct: 305 RNIDVASFAATTTDAVVGSFGLAVATTASTLDITFVDSVGVTDTAVTFVGGLVNETPTIG 364
Query: 360 AMEEMVSFID---------------TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVE 404
A +S +D + ++ +G+I +R ++ + +
Sbjct: 365 ATGTALSAVDISTVDGANDALVAADAALTTINSSRADLGAIQNRFESVVVSLQTSAENLS 424
Query: 405 KGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ DAD A+E+ L+ Q QQ + L+ N +L+L +
Sbjct: 425 ASRSRIQDADFAAETANLARAQILQQAGIAVLAQANAQPQNVLALLQ 471
>gi|46093563|dbj|BAD14977.1| flagellin [Escherichia coli]
Length = 516
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 72/513 (14%), Positives = 150/513 (29%), Gaps = 64/513 (12%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +S+ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISVAQTTEGALSEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L + + A I Q +D +
Sbjct: 124 DRVSGQTQFNGVKVLASKNTLTIQVGANDGETIDINLKEINSQTLGLDKLNVQKAYTPSG 183
Query: 180 STDGTERYGLLDR-------------NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + + + S K + T
Sbjct: 184 ENVKVDTTTYTTTYTDGTAIKNKAALATDVNNASSIGVSDAIPGDIKFNETSGKYYVAIT 243
Query: 227 TSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD 286
++ K + K + V ++P + T + VA + + + ++
Sbjct: 244 STEHNDKNGDYEITVDKDGSAALVAGQSSPKSLEDVGATKNVTAYQVANTQSNTQSVDAT 303
Query: 287 IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI 346
+ A ++ V T+ + + + + + T
Sbjct: 304 VSAGAISELKTGGVDNTAAGNAKLVKMTYTDSNGKKVEGGYALKVGDDYYAADYESTSKT 363
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQ----------------------------------- 371
T + ++ ++ I
Sbjct: 364 VTVRTTSYKDVDGVPQKGLNKIGGADGKTETVTIGEKTYAADKLKDHDFSKQATLGEEAT 423
Query: 372 -------------IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+ + +G++ +R + + + R+ DAD A+E
Sbjct: 424 TTTVNPLDAIDKALAQVDSLRSDLGAVQNRFDSTITNLGNTLNNLSSARSRIEDADYATE 483
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +T +LSL R
Sbjct: 484 VSNMSRAQILQQAGTSVLAQANQTTQNVLSLLR 516
>gi|309390121|gb|ADO78001.1| flagellin domain protein [Halanaerobium praevalens DSM 2228]
Length = 409
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 68/450 (15%), Positives = 141/450 (31%), Gaps = 47/450 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A+++ +L++ +L +R+SSG R++ AAD+AA +I++ M S LS
Sbjct: 3 INTNIAALNSYNQLKNTQSSLSKSLERLSSGKRINKAADDAAGLAISEKMMSQTRGLSMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S + A+ + ++ ++ ++ D + IQ E+ +L ++L
Sbjct: 63 QRNAQDGISMIQTAEGALKESHSILQRMRELSVQAANDTNTAGDREEIQKEVDELVNELD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L DLG++ + +V + G + ++ +
Sbjct: 123 RISNTTEFNTKKLLNGDLGTAVNTAVANVNENDSLKSGGSNIASGSTVVSLQDSDDNNLG 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ L V + +V + T T + +
Sbjct: 183 IAAGDTVELSYVKGDDTVTESITIASGTAVTALTSADITTSVASGTLTFTAANTGVSDAV 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ AA + S + +
Sbjct: 243 NGVTMTVKNASGEVKSAATDALSNFQETTKAADVR------------------------- 277
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T+ T + S + +
Sbjct: 278 -------------------TDGTATFQIGANSSQSLSLDIENMSSSNLGVAGVKVETQSQ 318
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ +D I+ +A K+GS +R+ + + + + R+ D DMA E
Sbjct: 319 ANASITALDKAIQKVSAERSKLGSKQNRLDHTINNLNTAEENLTAAESRISDVDMAKEMM 378
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ Q Q ++ N +L L
Sbjct: 379 SFTKSQILSQAGTAMMAQANQLPQGVLQLL 408
>gi|163856406|ref|YP_001630704.1| flagellin [Bordetella petrii DSM 12804]
gi|163260134|emb|CAP42435.1| flagellin [Bordetella petrii]
Length = 501
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 73/499 (14%), Positives = 144/499 (28%), Gaps = 49/499 (9%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN+ ++ A L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 3 AVINTNYLSLVAQNNLNKSQSALGSAIERLSSGLRINSAKDDAAGQAIANRFTANVRGLT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S + +++ + + I+ +D +SIQ+EITQ +
Sbjct: 63 QAARNANDGISIAQTTEGALNEINNNLQRIRELTVQASSGTNSPSDLESIQNEITQRLGE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF---IRDDNGKVQITTIDYYLDPETV 175
+ ++ + FNG L D + A + + + + +D +
Sbjct: 123 ITRVSEQTQFNGVKVLANDQSLTIQVGANDNETITIDLKQVNATTLGLDKLDVGSQLTSK 182
Query: 176 LLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
+ T + VE + V + + AT +
Sbjct: 183 NFANVTTIAASAPAEWTDFSFAVEGGSTFTLAVGTDNQLYATDGTDYYEATFNADTGTVT 242
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
+ I A + + V +A + D T
Sbjct: 243 VGAITAGIAASNINADATEFDTADGVVTLADAEAATLVEPAAPSVSTVYMDNTGTTTAYY 302
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTEST-------------------------------- 323
Y G + + ++
Sbjct: 303 VKAGGTYYDAEIDLDTGEVSVNLGSATSTLAAGTAVTAQAVLTAAADPGVAVDLSTVNST 362
Query: 324 -----------TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ D A + + + ++ ID +
Sbjct: 363 FSGTNSLVRDSETGAYYVKNVSGDKTSYYEATVDLDTGVVTATADDEIVVDPLNAIDNAL 422
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ +G+I +R + + + R+ DAD A+E + ++ Q QQ
Sbjct: 423 SAVDSLRSDLGAIQNRFESTITNLNNTVNNLSAARSRIEDADYATEVSNMTKAQILQQAG 482
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 483 TSVLAQANQVPQTVLSLLR 501
>gi|308054833|gb|ADO01463.1| flagellin [Salmonella enterica subsp. enterica]
gi|308054835|gb|ADO01464.1| flagellin [Salmonella enterica subsp. enterica]
gi|308054839|gb|ADO01466.1| flagellin [Salmonella enterica subsp. enterica]
Length = 506
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 77/503 (15%), Positives = 145/503 (28%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKS------------------------------- 148
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 149 ---------VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
G+ + T + +
Sbjct: 184 TAVTTTAYADNGTTLDVSGLTDAAIKTATGGTTGTASVTGGAVKFDADNNKYFVTIGGFT 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+ + + AT + T Q + A A
Sbjct: 244 GADAAKNGDYEVNVATDGTVTLAAGATKTTMPAGVTTKTEVQELTTTPVVASADAKNALI 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
T+ + + ++ + + G + A Y +T A T Y
Sbjct: 304 AGGVDTADANAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTTYTA 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA-----------YNEKLAMEEMVSFI 368
+ TT + L + T +A+ A E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|38049752|gb|AAR10495.1| phase 2 flagellin [Salmonella enterica]
gi|315633325|gb|ADU54191.1| flagellin [Salmonella enterica subsp. enterica serovar Edinburgh]
gi|315633327|gb|ADU54192.1| flagellin [Salmonella enterica subsp. enterica serovar Edinburgh]
gi|315633329|gb|ADU54193.1| flagellin [Salmonella enterica subsp. enterica serovar Nima]
Length = 506
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 79/503 (15%), Positives = 143/503 (28%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 180 STDGTERYGLLDR-----------------------------------NHKIKVEPQVLK 204
+ T Y N+K V
Sbjct: 184 TAVTTTAYADNGTTLDVSGLTDAAIKTATGGTTGTASVTGGAVKFDADNNKYFVTIGGFS 243
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
D + + +GA A + + A A
Sbjct: 244 GADAAKNGDYEVNVATDGTVTLAAGATKTTMPAGVTTKTEVQELTTTPVVASADAKNALI 303
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
G + A+ ++ + Y + + T T
Sbjct: 304 AGGVDTADANAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYN----------------EKLAMEEMVSFI 368
D G T +T T + E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|38049746|gb|AAR10492.1| phase 2 flagellin [Salmonella enterica]
gi|38049750|gb|AAR10494.1| phase 2 flagellin [Salmonella enterica]
Length = 506
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 79/503 (15%), Positives = 143/503 (28%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 180 STDGTERYGLLDR-----------------------------------NHKIKVEPQVLK 204
+ T Y N+K V
Sbjct: 184 TAVTTTAYADNGTTLDVSGLTDAAIKTATGGTTGTASVTGGAVKFDADNNKYFVTIGGFT 243
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
D + + +GA A + + A A
Sbjct: 244 GADAAKNGDYEVNVATDGTVTLAAGATKTTMPAGVTTKTEVQELTTTPVVASADAKNALI 303
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
G + A+ ++ + Y + + T T
Sbjct: 304 AGGVDTADANAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYN----------------EKLAMEEMVSFI 368
D G T +T T + E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|292489143|ref|YP_003532030.1| flagellin, filament structural protein FliC [Erwinia amylovora
CFBP1430]
gi|292900262|ref|YP_003539631.1| flagellin [Erwinia amylovora ATCC 49946]
gi|291200110|emb|CBJ47236.1| flagellin [Erwinia amylovora ATCC 49946]
gi|291554577|emb|CBA22200.1| flagellin, filament structural protein FliC [Erwinia amylovora
CFBP1430]
Length = 483
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 76/480 (15%), Positives = 150/480 (31%), Gaps = 31/480 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L +L R+SSGLR++ A D+AA +I+ + ++
Sbjct: 4 VINTNALSLMAQTNLNKSQASLGTAIQRLSSGLRINSAKDDAAGQAISNRFTASIEGMTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVM---STIKNKITAGVERGTDSKSIQSEITQLQSQL 119
+ G S + +++ D + + + G +D KS+Q EIT +++
Sbjct: 64 AARNANDGISLAQTTEGALNEINDNLLNIRRLTEQALNGTNSESDKKSVQEEITARLAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA+ + FNG N L I + D D L S
Sbjct: 124 GRIAKDTDFNGVNVLDGSTSQLQIQIGAKDGQTIGIDLPAMDLEKLGLDGYDVTGALASS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQ----VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
T KV L +S +A+ + L + A +
Sbjct: 184 GAKPTLDAAGNKITLNDKVNAGAEQVTLNASAMSSIEAAVGAAAGDVSLYSVGEAGKETY 243
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
A + + + T+G S + + ++ ++A +
Sbjct: 244 YALDSATGEATEVTLKGDGSGVLATATAGEKLSAVDADILANGPSKLTGEGEVLKAGQEI 303
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
+ VD L D + + + A
Sbjct: 304 DLAGTAHKLTEQDMTDIAAEMGVDAADMELIGLTDDAGAVKYYAVHTDASGVKTAAEMTL 363
Query: 356 NE------------------------KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ +++ +D+ + + +G++ +R +
Sbjct: 364 ADNAGAITAAKGTALAAADTQKLGELAHGNNGLLATMDSALAQVDSFRSGLGAVQNRFNS 423
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + + R++DAD ++E + +S QQ + LS N +LSL R
Sbjct: 424 IISNLNTTVNNMTEAKSRILDADFSAEVSSMSRANILQQAGITVLSQANQVPQNVLSLLR 483
>gi|149376773|ref|ZP_01894530.1| Flagellin [Marinobacter algicola DG893]
gi|149358894|gb|EDM47361.1| Flagellin [Marinobacter algicola DG893]
Length = 503
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 74/499 (14%), Positives = 145/499 (29%), Gaps = 50/499 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L + V R+SSGLR++ A D+AA +I++ S L+
Sbjct: 5 INTNIASLNAQRNLNTSQEDSNVALQRLSSGLRINSAKDDAAGLAISERFTSQIKGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
G S A+ + ++ +++ I+ +D K++QSE+ QL+ +L
Sbjct: 65 IRNANDGISLAQTAEGALGESGNILQRIRELAVQSANATNSASDRKALQSEVNQLKGELE 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG L + + S G + LD L+
Sbjct: 125 RIATTTEFNGLKLLDGTFQAQKFQAGANENQSIAVSIEGARTADLANNTLDAANATLNQG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T T + + T +A
Sbjct: 185 TGSTTAANATLPAQNTIATQNLTISSSLDSQVVPITAGDTAEDIAAAINDIGATTGVNAT 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ S S + ++ S I + T
Sbjct: 245 ARTSATLSNTATTPIAVPQTVSLTLSNGSSSATISAQITDANDLSAIAREVNAASGKTGI 304
Query: 301 PGYTNSTVAKVGNTHYYVDTE--------------------------------------- 321
+ + D
Sbjct: 305 TAEVANDGSITLIQEQGKDITIEDFTAAGSQQLAVQGSGDPSAIELTNGGANATRIAGEL 364
Query: 322 --------STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ T D+ ++S + + + ++ +D ++
Sbjct: 365 TLDSSVSFAATSDATLAAGSVLNSAQNTAAGSTPEEVAGIDISTVDGATSALAVVDAALE 424
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R+ + + + R+ DAD A+ES L+ Q QQ +
Sbjct: 425 TISGIRADLGAAQNRLESTIANLSTTSENLSAARSRIRDADFAAESAELARTQVLQQAGL 484
Query: 434 QALSIVNNSTARILSLFRG 452
L+ N ++L L +G
Sbjct: 485 SVLAQANARPQQVLQLLQG 503
>gi|120555503|ref|YP_959854.1| flagellin domain-containing protein [Marinobacter aquaeolei VT8]
gi|120325352|gb|ABM19667.1| flagellin domain protein [Marinobacter aquaeolei VT8]
Length = 494
Score = 204 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 69/490 (14%), Positives = 147/490 (30%), Gaps = 42/490 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++SA +L +R+SSGLR++ A D+AA +I+ ++ L+
Sbjct: 5 INTNVASLSAQNQLNRSQEQSNQALERLSSGLRINSAKDDAAGLAISNRFEAQIRGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ + ++ +++ ++ +D +++Q E+ QL S+L
Sbjct: 65 TRNANDGISLAQTAEGALGESSNILQRVRELAVQSANASNSASDRQALQDEVNQLVSELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++FNG+ G++ + + + + + + + + +S
Sbjct: 125 RIATTTNFNGQKLFDGTFGTAQFQVGANANETISASTSNLRTNSYGNNQIIAGGADIVAS 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ S T A + +
Sbjct: 185 GAADNNNVTTGSLAINGSVGSKSITVAASGTAQDIASQINDVSGETGVTATARTELSLGF 244
Query: 241 QA---------------------------------------KGIATIPVPLPAAPAAPNT 261
A + + +
Sbjct: 245 DTAGSYSLSLQGENATAQEISFTLSATEGKDALSSAVAAINDQSAKTGITAEVSDDGKSV 304
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
V + + + + +T +
Sbjct: 305 VLTNGNGADIVVGNTNVTSDGDVTIDKNFRDKDGVLQNTGFTQQDLATSSASTDTVTVSG 364
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
DS K S + R + + + + ID + ++ K
Sbjct: 365 YLQFDSDKSFSVVSASSAVTTGTSEQRKLSDIDITSFESATQALKTIDASLNNLSSQRAK 424
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
G+I SR ++ + R++DAD A+E+ +LS Q QQ + L+ N
Sbjct: 425 FGAIQSRFESTISNLESTSTNLSAAQSRILDADFAAETAKLSKAQVLQQAGISVLAQANA 484
Query: 442 STARILSLFR 451
++LSL +
Sbjct: 485 RPQQVLSLLQ 494
>gi|120613037|ref|YP_972715.1| flagellin domain-containing protein [Acidovorax citrulli AAC00-1]
gi|120591501|gb|ABM34941.1| flagellin domain protein [Acidovorax citrulli AAC00-1]
Length = 492
Score = 204 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 75/490 (15%), Positives = 157/490 (32%), Gaps = 40/490 (8%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I TN S+++A + L +L R+SSGLR++ A D+AA +I++ S ++
Sbjct: 3 STINTNISSLTAQRNLSLSQSSLNTSIQRLSSGLRINSAKDDAAGLAISERFTSQIRGMN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S +A++ ++ A +++ ++ D K+IQ+E+ QL S+
Sbjct: 63 QAARNANDGISLSQVAESALAGAGNILQRVRELSVQSANATNSAGDRKAIQAEVGQLLSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT------------- 165
L IA + FNG+ L GS+T + + + +
Sbjct: 123 LDRIAGTTEFNGQKLLDGSFGSATFQVGANANQTITATTGNFRTMNYGAQLTASATGAAT 182
Query: 166 ------------------------IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
++ + ++ + + + E +
Sbjct: 183 TGATAGSAGAAAGTVVIGGLQTKTVNVAAASTAADIAAAVNAVADSTGVTAAARNVSELK 242
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
+ + S+ + +S + +++ +
Sbjct: 243 LTGNGSYSLAVKGENSTAANVTFNVSSNSSAAGLAEAVKAFNDVSSQTGITAKLNSDNTG 302
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
T+ S A+ G + A S + +T A E
Sbjct: 303 LILTNESGKDINIANGASSAAGITLASQDAVQTLSSGNLTFTAATTAATGVTVAARGTVE 362
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ + T + + +T + + ID +
Sbjct: 363 YNSDKGYTVSGTGDTMTNAAATSSNMKSVSTIDVSTVDGSTRALKIIDAALAAVNGQRAN 422
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
G++ SR + + + R+ DAD A+E+ LS Q QQ ++ N
Sbjct: 423 FGALQSRFETAIANLNTSSENMSASRSRIQDADFAAETANLSRSQILQQAGTAMVAQANQ 482
Query: 442 STARILSLFR 451
+LSL +
Sbjct: 483 LPQGVLSLLK 492
>gi|146277697|ref|YP_001167856.1| flagellin domain-containing protein [Rhodobacter sphaeroides ATCC
17025]
gi|145555938|gb|ABP70551.1| flagellin domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 498
Score = 204 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 71/498 (14%), Positives = 148/498 (29%), Gaps = 46/498 (9%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT+I TN A++A + +N R+S+GLR++ A D+AA +I + M + L
Sbjct: 1 MTTINTNIGAIAAQANMTKVNDQFNTAMTRLSTGLRINAAKDDAAGMAIGEKMTAQVMGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQS 117
+ G + VD + + ++ ++ D S+ SE QL +
Sbjct: 61 NQAVRNAQDGKNLVDTTEGAHVEISSMLQRLRELAVQSSNDTNTAADRGSLASEGKQLIA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +A ++FNG L I + + + + +++
Sbjct: 121 EINRVAESTTFNGMKILDGSFAGKQLQIGADAGQTITINVDSAAATDIGANSVRSTSLIA 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + E + A+ S + +
Sbjct: 181 AGTDSDIADTTDIIITGFAGSEKVTTSAGQSAKSLATEINKLTASTGVEASAVSKASLSG 240
Query: 238 TFDQAKGIATIPV-------------------------------------------PLPA 254
I
Sbjct: 241 FVTDTSVSFKIGTAGGTDGNSVSIGTVAITDSSDVRALRDAINAVSGQTGVTASMKSGDN 300
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
SG + + T+ + T+ + A V
Sbjct: 301 GTIILTHASGEDIVLEEAAFTGTGAEFTVTALDADGKETEAATTAVTLDGTAAEATVTGQ 360
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
T++ ++ + + + + + ID +
Sbjct: 361 VELTSTKAFSVYTEDGADDASTHFTDVTKASELESVAAINLTTAEGAGKAIKVIDVALSK 420
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ + ++G++S+R+ + + +V+ +++DAD A+EST L+ Q Q A
Sbjct: 421 ISQSRSELGAVSNRLDSTISNLTNISTSVQAAKSQVMDADFAAESTALARGQILSQAATA 480
Query: 435 ALSIVNNSTARILSLFRG 452
L+ N+S +LSL RG
Sbjct: 481 MLAQANSSKQNVLSLLRG 498
>gi|124268052|ref|YP_001022056.1| flagellin-related hook-associated protein [Methylibium
petroleiphilum PM1]
gi|124260827|gb|ABM95821.1| flagellin-related hook-associated protein [Methylibium
petroleiphilum PM1]
Length = 404
Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats.
Identities = 69/449 (15%), Positives = 137/449 (30%), Gaps = 48/449 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN +++A + L +L R+SSGLRV+ A D+AA +IA+ M + L+
Sbjct: 4 SVNTNIVSLNAQRNLGTSQSSLATSMQRLSSGLRVNSAKDDAAGLAIAERMNASVRGLNV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
+ G S A+ + K D++ ++ + ++ ++ +I
Sbjct: 64 AARNANDGISLAQTAEGALGKVGDMLQRMRELAVQSGNATNSADDRKALQAEVTQLRDEI 123
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+T + K + GSF + + T S+
Sbjct: 124 ------------DRVAKQTTFNGRKLLDGSFTAAAFQVGAGAGDNITVGSLTNASASNLS 171
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + D A
Sbjct: 172 KITYAEISSGDLAKDDTDITTLD------------------------------------A 195
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
+ + + + +++ S + + + ++
Sbjct: 196 IADGDLQITIDDGGDNELVVEVGAIAQASSGLERLGQVAEAINRKTSDTGVSAYLVANDD 255
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
T K S +D G + + + + +
Sbjct: 256 GTYKLDIKASRLDADGAPLSVEFTGFDTTTTGLDEGDVPAAVTDAIGIDALSIETESDVW 315
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ ID+ + +A G +G+I SR I++ + GR++DAD ASE+ L
Sbjct: 316 VSIKKIDSALDQVNSARGTLGAIQSRFENAVSNIQIQAENTAASRGRIMDADFASETANL 375
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q QQ ++ N ++LSL R
Sbjct: 376 SRSQILQQAGTAMVAQANQLPQQVLSLLR 404
>gi|212634357|ref|YP_002310882.1| flagellin [Shewanella piezotolerans WP3]
gi|212555841|gb|ACJ28295.1| Flagellin [Shewanella piezotolerans WP3]
Length = 463
Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats.
Identities = 71/459 (15%), Positives = 144/459 (31%), Gaps = 11/459 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN ++M A + + N + +R+SSGLR++ A D+AA I+ M S +
Sbjct: 4 SVNTNVTSMKAQANMNKASSNQQTSMERLSSGLRINSAKDDAAGLQISNRMTSQINGIGV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M ++ +++ +++ D ++Q E++ LQS+L
Sbjct: 64 AMRNANDGISIAQTAEGAMQESTNILQRMRDLSLQSANGSNSSDDRAAMQKEMSSLQSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL--- 176
I+ +SF G+ L G+ + + + + LD
Sbjct: 124 TRISETTSFGGQKLLDGTYGTQNFQVGSNANETISVSLMDTSASAIGQHQLDGTGTTGAK 183
Query: 177 -----LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
D ++ + + AT +
Sbjct: 184 LGAAVADGTSATATGVTTGTMKVNGDSLTIAADAKATEIATQVNGLDNGVKAEATVTATV 243
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
AT D I T + + + + + + + A
Sbjct: 244 GALTGATVDADLKIGTKTYAMADYVDNQDKLVEDLKADGFEASNDNGTVSITAKGVDSIA 303
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
+ + + V V+ S + I T +
Sbjct: 304 LEGGAANTATLDGAAAVVAGKVKFAAVEMTSQNNIALSGTAATITDVVGTATSSTLASVE 363
Query: 352 TDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ + ++ ID I + +G++ +R++ + + ++ V R+
Sbjct: 364 GLDITDADGAQSSIAVIDAAIAGIDSQRADLGAVQNRMNFTINNLSNVQSNVSDARSRIQ 423
Query: 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D D A E+ L+ Q Q + L+ N LSL
Sbjct: 424 DVDFAKETAELTKQQILSQTSSAMLAQANQLPQAALSLL 462
>gi|311279127|ref|YP_003941358.1| flagellin domain-containing protein [Enterobacter cloacae SCF1]
gi|308748322|gb|ADO48074.1| flagellin domain protein [Enterobacter cloacae SCF1]
Length = 443
Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats.
Identities = 70/453 (15%), Positives = 138/453 (30%), Gaps = 16/453 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI S++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRIRELTVQSQTGTNSDSDLSSIQDEIKSRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + S A I ++ L
Sbjct: 124 DRVSGQTQFNGVNVLAKNGTMSIQVGANDGQTINIDLQKI-------------DSSTLGL 170
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + L + +V + + + K K+ ++ +
Sbjct: 171 NGFSVSKQSLSVGDSINQVVDNGTGANKGQMVNVDLSDVAKNLKVDASTLSLHNITGTDK 230
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + +G + V + + T
Sbjct: 231 YVVQSGNDYYSVSVGDSSVTAGDAGKVELNTTDVKYGDAANGIATDGATITGQYIKVGTD 290
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ V ++ V P + + A
Sbjct: 291 PTTGAATGYVTVQGKNFSVAAADLVNSKDSATPTNGAATTGIQLSVGGAITTATAEFAGT 350
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 351 SSNNPLALLDKAIASVDKFRSSLGAVQNRLGSAVTNLNNTTTNLSEAQSRIQDADYATEV 410
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 411 SNMSKAQIVQQAGNSVLSKANQVPQQVLSLLQG 443
>gi|254522597|ref|ZP_05134652.1| flagellar protein [Stenotrophomonas sp. SKA14]
gi|219720188|gb|EED38713.1| flagellar protein [Stenotrophomonas sp. SKA14]
Length = 406
Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats.
Identities = 57/449 (12%), Positives = 123/449 (27%), Gaps = 47/449 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L +L R+SSGLR++ A D+AA +I++ + L
Sbjct: 4 VINTNTMSLNAQRNLSTSGSSLATTIQRLSSGLRINSAKDDAAGLAISERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
G S +A+ +S+ + + I+ S ++ LQ+++ +
Sbjct: 64 AIRNANDGISLAQVAEGSLSEVGNNLQRIRELAVQSSNATNSSSDRKA----LQAEVTQL 119
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ S
Sbjct: 120 VSEVDRVAKQADFNGTKLLDGSFTSQ---------------------------------- 145
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ N + + + A+ + + + Q
Sbjct: 146 ----LFQVGANAGQAIAINSVVNAKADSLGAATFANGYTGTSLAAADKATADTTYSGLQI 201
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
+G S + + + A + G + D
Sbjct: 202 SVTPPGGTATTVTINDFTVKAGESITSATAAAINGKLGETGVMASVNAGVVSLASVKDGQ 261
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
V+ L + ++T + +
Sbjct: 262 TFTLGVSAATPPTGATAATIAGLGLTETSTNG-----GLLTGAASNFVKDLNVTTAEGAQ 316
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ +S +D ++ + +G+I +R ++ + + R+ D D A E+ L
Sbjct: 317 KALSIVDKALESVNSVRADLGAIQNRFTSVVANLQTSSENLSASRSRIRDTDFAKETAEL 376
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q QQ L+ N +LSL +
Sbjct: 377 TRTQILQQAGTAMLAQANQVPQNVLSLLQ 405
>gi|121611312|ref|YP_999119.1| flagellin domain-containing protein [Verminephrobacter eiseniae
EF01-2]
gi|121555952|gb|ABM60101.1| flagellin domain protein [Verminephrobacter eiseniae EF01-2]
Length = 506
Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats.
Identities = 74/504 (14%), Positives = 149/504 (29%), Gaps = 54/504 (10%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I TN ++++A + L +L R+SSGLR++ A D+AA +I++ S L
Sbjct: 3 ATINTNIASLTAQRNLGLSQSSLNTSIQRLSSGLRINSAKDDAAGLAISERFTSQIRGLD 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQ 118
+ G S + + M A D++ ++ D +++ E+ QL S+
Sbjct: 63 QAARNANDGISLAQVTEGAMKSASDILQRVRELAVQSANASNSPGDRQALNQEVGQLVSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA+ + FNG L G+ + + + + +
Sbjct: 123 LDRIAQTTEFNGAKLLDGSFGTQQFQVGANANQTIVAATANLRTGVYGNNQNTAANGAGA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW------- 231
+ G + + + +A+ T + +
Sbjct: 183 DANMGADAAWGSNGVGTGALAISGALGSASIGIEANHTAKAMADAINLKTADTGVTASAR 242
Query: 232 -------------------------------LKAANATFDQAKGIATIPVPLPAAPAAPN 260
+ G++ + A
Sbjct: 243 TEVQLSFSAPGAYTFQLRSENRPNPPALGQPMAFHVTATGTIDGLSNAIAAINEQSAKTG 302
Query: 261 TTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDT 320
T+ + + V + T +G + +IT + A
Sbjct: 303 VTAALNPGATGIVLTNTTGQDIGLYKSASDSGNAGTITVQKQNADGLPAGSAGALAAAAG 362
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM------VSFIDTQIKC 374
S + + VT + A + E +K
Sbjct: 363 VGNATVSGYVVLDANKPFSTTVTTTNAFNTTAPADSASSLQEVAGLDVTTFKNATEALKT 422
Query: 375 ATAA-------AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+A K+G++ SR + + + + R++DAD A+E+ LS Q
Sbjct: 423 VDSALSFINGERAKLGALQSRFESTIASLNITSENLSASRSRILDADFATETANLSRAQI 482
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
QQ ++ N +L L +
Sbjct: 483 LQQAGTAMVAQANQIPQGVLKLLQ 506
>gi|222112255|ref|YP_002554519.1| flagellin domain-containing protein [Acidovorax ebreus TPSY]
gi|221731699|gb|ACM34519.1| flagellin domain protein [Acidovorax ebreus TPSY]
Length = 490
Score = 203 bits (514), Expect = 7e-50, Method: Composition-based stats.
Identities = 76/488 (15%), Positives = 155/488 (31%), Gaps = 38/488 (7%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I TN ++++A + L +L R+SSGLR++ A D+AA +I++ S L+
Sbjct: 3 STINTNVASLTAQRNLGMSQASLNTSIQRLSSGLRINSAKDDAAGLAISERFTSQIRGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S A+ + + D++ ++ +D +++Q+E+ QL S+
Sbjct: 63 QAVRNANDGISLAQTAEGALKASGDILQRVRELAVQSANASNSASDRQALQAEVGQLVSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTID----------- 167
L I++ + FNG L G+ + + + I +
Sbjct: 123 LDRISQTTEFNGTKLLDGTFGTQQFQVGANANQTIIAATGNMRTNVYGNNQNTAVNGAGA 182
Query: 168 ------------------------YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
V + + + +
Sbjct: 183 AGVAAAWGANGATAGAVAINGALGSSTVTTVVNATAKATADQINAVKSSTGVSATARTDM 242
Query: 204 KDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTS 263
+ + S T+ + + S A + A A T+
Sbjct: 243 EVTLGAAGSYSLTLQSDNSTAVSVSFNTSGGAGLSAAVAAFNDQTSKTGVTASLNTAGTA 302
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
+ + + A + N + G A + + + +
Sbjct: 303 IVLSNATGNDIHIANLDAAITNAGTASVQKLNQAGAASGGAVVVAALGAAGNQALVSGNI 362
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
TLDS K S + + + +D+ + K+G
Sbjct: 363 TLDSEKSFSITSASTALTTGGSTLNKVADLDVTTFKKASDALKTVDSALSFINGERAKLG 422
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
++ SR +++ + + R++DAD A+E+ LS Q QQ ++ N
Sbjct: 423 ALQSRFETSISNLQVTSENLSSSRSRILDADFAAETANLSRAQILQQAGTAMVAQANQLP 482
Query: 444 ARILSLFR 451
+LSL R
Sbjct: 483 QGVLSLLR 490
>gi|89899441|ref|YP_521912.1| flagellin-like protein [Rhodoferax ferrireducens T118]
gi|89344178|gb|ABD68381.1| flagellin-like [Rhodoferax ferrireducens T118]
Length = 472
Score = 203 bits (514), Expect = 7e-50, Method: Composition-based stats.
Identities = 72/470 (15%), Positives = 143/470 (30%), Gaps = 20/470 (4%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I TN S+++A + L +L R+SSGLR++ A D+AA +I++ M + +
Sbjct: 3 SVINTNISSLTAQRNLGMSQASLATAMQRLSSGLRINSAKDDAAGLAISERMTTQIRGSN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S A+ +++ + + ++ +D ++ E+ L ++
Sbjct: 63 QAARNANDGISLAQTAEGDLAQIGNNLQRMRELAVQSANATNSSSDRAALDGEVQALSAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ A+ SSFNG L + + + + T T
Sbjct: 123 IDRAAQNSSFNGTKLLDGSFTAQKFQVGANNTANDSITIAAIASARTSVLGGYTTTKAGG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+T L + + S + + A +A T
Sbjct: 183 VTTAALTAGALTLNGTSVGASAATSIPGQSASSAYSIAAAINAVSGQSGVTATAQATAVT 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNT-----------------TSGTSGSKSPSVAASATYIR 281
I + S V ASA
Sbjct: 243 GAVQTAFTAITTGATLTVNGIQVGSIAAGGAAPAQGANVAAAINLVSSQSGVTASAAADG 302
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
+ T + +D+ S+ + +
Sbjct: 303 KVTLTAADGRDIALGAGWVAADSGLTASATTVGTVTLDSTSSAGITIAGTAPASAGFTAG 362
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
TL ++ A + ID ++ +A+ +G+ +R ++ +
Sbjct: 363 TTLATATKISSMNVLTAAAATAALGTIDGALETVSASRAALGAYQNRFTSVVTSLQTTSE 422
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ R+ DAD A+E+ LS Q QQ ++ N +LSL +
Sbjct: 423 NLSASRSRIQDADFAAETANLSRAQILQQAGTAMVAQANQLPQGVLSLLK 472
>gi|257413133|ref|ZP_04742102.2| flagelline [Roseburia intestinalis L1-82]
gi|257204535|gb|EEV02820.1| flagelline [Roseburia intestinalis L1-82]
Length = 497
Score = 203 bits (514), Expect = 7e-50, Method: Composition-based stats.
Identities = 67/480 (13%), Positives = 141/480 (29%), Gaps = 36/480 (7%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
SA A++ L I NL +R+SSGL+++ + DN A +I+ MK+ L+ S
Sbjct: 18 VSAAIANKHLLGIEDNLSASMERLSSGLKINHSKDNPAGMAISNKMKAQIDGLNRASQNA 77
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITA----GVERGTDSKSIQSEITQLQSQLRDIA 123
G S + IA +S+ ++ ++ D ++IQ EIT L+ ++ I+
Sbjct: 78 SDGISVIQIADGALSETTSILQRMRELSVQAASDATMTPADKEAIQKEITSLKDEVDRIS 137
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ +N + L L + + + + G+ Q++ V + + +
Sbjct: 138 TDTEYNSKTLLDGSLDTRVYTKNATRVDISDHVKAGQYQLSIDTAATQAGPVTANQNYNS 197
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
T G + ++ + + + + +
Sbjct: 198 TAPVGASGTMSINGSKVEIEAADTYAEAFEKIRNAAETGETTVKIEKNGALSFTAEQYGM 257
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG-------------------- 283
A + G+ + G
Sbjct: 258 SSILEIAFDDKQLANALGFTADGGNSVVEDPENKGSYVYGQIQNGKVIVPSGTDAEVTLT 317
Query: 284 ------------NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
T + G + V T
Sbjct: 318 KPSDGTGFGDTATVKTDGNKITVTDRAGFEMSFLADAGYTGKLDFDVTDIGTMALHIGAN 377
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ + + + ++ D I + ++G+ +R+
Sbjct: 378 EDQETRVRIPEVSCKSLYIDDADVTTVNGAGRGITQFDDAISKVSEVRSRLGAYQNRLES 437
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + RL DADMASE T + Q A+ L+ N+ ++L + +
Sbjct: 438 TVSSLDTFEENMTGAQSRLTDADMASEMTDYTHQNVLNQAAISVLTQANDLPQQVLQILQ 497
>gi|300717213|ref|YP_003742016.1| flagellin [Erwinia billingiae Eb661]
gi|299063049|emb|CAX60169.1| Flagellin [Erwinia billingiae Eb661]
Length = 428
Score = 203 bits (514), Expect = 7e-50, Method: Composition-based stats.
Identities = 66/453 (14%), Positives = 127/453 (28%), Gaps = 31/453 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNINGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
+ G S + +S+ + + ++ SIQ EI ++
Sbjct: 64 AARNANDGISAAQTTEGALSEINNNLQRVRELTVQSQNGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + + + L S
Sbjct: 124 DRVSGTTQFNGVNVLAKDGTMKIQVGANDGETISIDLQKIDSSTLGLKGFSVDKNALSLS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ T + + + + + + N +
Sbjct: 184 DSITTVGDASTGAVASVDLSAVASGLGVAASGLSLHAVLDSGGAATNNYVVTSGSDNYSV 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G A D T
Sbjct: 244 SVGSGGAVALNTTEVDYT----------------------------DTKNGVTGGVMTGQ 275
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + + T+ A
Sbjct: 276 PIKVGADASGNAQGFVSVQGKDYKVAAADIVNGGDTATTATTSTVGDISDTGNTALYTGT 335
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 336 STSDPLALLDKAIAQVDTFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEV 395
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ LS Q QQ LS N+ ++LSL +G
Sbjct: 396 SNLSKAQIIQQAGNSVLSKANSVPQQVLSLLQG 428
>gi|291520169|emb|CBK75390.1| Flagellin and related hook-associated proteins [Butyrivibrio
fibrisolvens 16/4]
Length = 496
Score = 203 bits (514), Expect = 7e-50, Method: Composition-based stats.
Identities = 77/495 (15%), Positives = 154/495 (31%), Gaps = 46/495 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N A +AS+ L + +++SSG +++ AAD+AA SI++ M+ L+
Sbjct: 2 VVQHNMQAANASRTLNITTDSQSKSTEKLSSGYKINRAADDAAGLSISEKMRKQIRGLTQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
S G S V A+ +++ D++ + D IQ+EI QL ++
Sbjct: 62 ASTNASDGVSSVQTAEGALTEVHDMLQRMNELAVQAANGTNSESDRDDIQNEIDQLSQEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE------ 173
IA + FN L+ D+G +I G + T L+
Sbjct: 122 DRIASTTKFNETFLLKGDIGLKQLNIDAHDAGLEGTLVQNSTRATFTMESLEAGEKYRIG 181
Query: 174 ------------------------TVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ D + + L + +
Sbjct: 182 GTQYTIGAKSNKEVAAALKFSDDMIQGGEEGADASTEWKLTAGDTISIDGKTYTIIEGDN 241
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
A+ I+ +G+ +K + A A +
Sbjct: 242 SDVANAKITNGYLNHLIVAGSTIKYNGNEVKRFTSTADGIDKADATLVTATAAYNMVAIE 301
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ ++ + + D T++ T + NT + ++ +
Sbjct: 302 LKAASSIGATDKAADIDKNPTTGKYLYDTTEITQTVGADQTIPNTVISFTIKKGYVNVQN 361
Query: 330 DLPKEIDSGYSMVTLNITR-------------HANTDAYNEKLAMEEMVSFIDTQIKCAT 376
L + G N + + A + I I+ +
Sbjct: 362 ALTLNLHVGADAAMTNKINVTIEAMNSKSIGINGINVSDATGKAATYAIDAIADAIQRVS 421
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
A ++G+I +R+ + + + E R+ D DMA + S QQ L
Sbjct: 422 AQRAELGAIQNRLEHSIRNLDNVVENTEAAESRIRDTDMADQMVEYSKNNILQQAGQSML 481
Query: 437 SIVNNSTARILSLFR 451
+ N +T +++L +
Sbjct: 482 AQANQATQGVMNLLQ 496
>gi|119477942|ref|ZP_01618042.1| Flagellin [marine gamma proteobacterium HTCC2143]
gi|119448855|gb|EAW30097.1| Flagellin [marine gamma proteobacterium HTCC2143]
Length = 495
Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats.
Identities = 71/492 (14%), Positives = 149/492 (30%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++SA L +LE +R+SSGLR++ A D+AA +I M S L+
Sbjct: 4 VINTNIASLSAQNSLNKSQSSLETSLERLSSGLRINSAKDDAAGLAIVDRMTSQIRGLNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S A+ + ++ ++M ++ +D +IQ E+TQLQ++L
Sbjct: 64 AVRNANDGLSVSQTAEGALQESSNIMQRMRELSVQSANDSNSASDRSAIQQEVTQLQNEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP------- 172
I+ +++NG+N L S + + + +
Sbjct: 124 NRISETTTYNGKNLLDGSFASQSFQVGANANETIEVSITSASAKVLGSQSATTAQNIGTA 183
Query: 173 ---------------------------------ETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + +
Sbjct: 184 AVGALTAPAANGVVDSDITITGALGAGTADYAAGATASEIAALVNGQTTNTGVTATAANS 243
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+ ++ + T + +AT A A
Sbjct: 244 VSLTSFTTGTLSFTLSSTDGSNVTQGTAANVSATVTSATDLTALRNDINESTASTGITAT 303
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+G + + N + + ++ G +
Sbjct: 304 INAAGDGIDLTNTTGDDIVIETASNGAGASANPFVVNGAALTEAGADSIRVAGQVSFSSS 363
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + ++ + + + + + + +D + T +
Sbjct: 364 GAFILDAAAAETVLDVAIVAAASVSSTLSSVADIDVSTRAGANDALDVLDRALATITDSR 423
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G+I +R+ + + + V R+ DAD A+E+ L+ Q QQ + LS
Sbjct: 424 AGLGAIQNRLDSTISNLSNISENVSAARSRIEDADFAAETAELTRSQILQQAGISVLSQA 483
Query: 440 NNSTARILSLFR 451
N ++LSL +
Sbjct: 484 NTLPQQVLSLLQ 495
>gi|149376772|ref|ZP_01894529.1| flagellin domain protein [Marinobacter algicola DG893]
gi|149358893|gb|EDM47360.1| flagellin domain protein [Marinobacter algicola DG893]
Length = 500
Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats.
Identities = 79/496 (15%), Positives = 154/496 (31%), Gaps = 48/496 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++SA +L +R+SSGLR++ A D+AA +I+ +S L+
Sbjct: 5 INTNVASLSAQNQLNKSQELSNQALERLSSGLRINSAKDDAAGLAISTRFQSQISGLNVA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S A+ + + +++ I+ +D ++Q E+ QL+ +L
Sbjct: 65 QRNANDGISLAQTAEGALEETTNILQRIRELSVQSANSTNSSSDRSALQGEVNQLKQELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG N L + + + + + G + + E+ S
Sbjct: 125 RIAGTTQFNGLNLLDGSFTAQSFQVGANANQTISVSVTGARGADLGNNTVSGESDTTVSQ 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV-------------------------------- 208
G+ D
Sbjct: 185 GTGSVAVAAADVATVANNTIATQNITVSGTEGSEVIGITQGDTAEAIAAAVNAETGTTGV 244
Query: 209 -------------SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
S AT S A +A + + A
Sbjct: 245 TATASTTATLAGLSDDGTVSFTLGSGGDTATISAAVTTTDLGALAKAINDTSGTTGVTAE 304
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
T + K + A + + +++T G T+ST+A
Sbjct: 305 ANGGEITLTQADGKDIRLQDFANSGNATGTATLQGSGDPSAVTLTAGSTDSTIASGSVEF 364
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
S + + ++ V + + ++ + D ++
Sbjct: 365 ASSGAFSVSSSVAETAGSILNVAADTVVGSNLQSVSSIDIGTVAGANSAIEIADAALEQI 424
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ +G+ +R + + + R++DAD ASE+ +LS Q QQ +
Sbjct: 425 SGIRADLGAAQNRFESTIANLSTTAENLSAANSRILDADFASETAKLSKAQVLQQAGISV 484
Query: 436 LSIVNNSTARILSLFR 451
L+ N ++LSL +
Sbjct: 485 LAQANARPQQVLSLLQ 500
>gi|315633323|gb|ADU54190.1| flagellin [Salmonella enterica subsp. enterica serovar Edinburgh]
Length = 506
Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats.
Identities = 78/503 (15%), Positives = 142/503 (28%), Gaps = 54/503 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSXKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKD 183
Query: 180 STDGTERYGLLDR-----------------------------------NHKIKVEPQVLK 204
+ T Y N+K V
Sbjct: 184 TAVTTTAYADNGTTLDVSGLTDAAIKTATGGTTGTASVTGGAVKFDADNNKYFVTIGGFS 243
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
D + + +GA A + + A A
Sbjct: 244 GADAAKNGDYEVNVATDGTVTLAAGATKTTMPAGVTTKTEVQELTTTPVVASADAKNALI 303
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
G + A+ ++ + Y + + T T
Sbjct: 304 AGGVDTADANAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTA 363
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYN----------------EKLAMEEMVSFI 368
D G T +T T + E + I
Sbjct: 364 ADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G++ +R + + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 484 QQAGTSVLAQANQVPQNVLSLLR 506
>gi|30059896|gb|AAP13320.1| FliC [Escherichia coli]
Length = 443
Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats.
Identities = 69/453 (15%), Positives = 130/453 (28%), Gaps = 16/453 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A D + I + S
Sbjct: 124 DRVSGQTQFNGVNVLAKDNTMKIQVGAN---------DGQTISIDLQKIDSSTLGLNGFS 174
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + +D SV L + + +
Sbjct: 175 VSKNALETSEAITQLPNGANAPIAVKMDASVLTDLNITDASAVSLHNVTKGGVATSTYVV 234
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
V + + + A+ +
Sbjct: 235 QYGDKSYAASVDAGGTVKLNKADVTYNDAANGVTNATQIGSLVQVGADANNDAVGFVTVQ 294
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
Y + N T+D L + +
Sbjct: 295 GKNYVANDSLVNANGAAGAAATRVTIDGDGSLGANQAKIELSQNGATAATSEFAGASTN- 353
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 354 ---DPLTLLDKAIASVDKFRSSLGAVQNRLSSAVTNLNNTTTNLSEAQSRIQDADYATEV 410
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 411 SNMSKAQIIQQAGNSVLSKANQVPQQVLSLLQG 443
>gi|121535543|ref|ZP_01667351.1| flagellin domain protein [Thermosinus carboxydivorans Nor1]
gi|121305871|gb|EAX46805.1| flagellin domain protein [Thermosinus carboxydivorans Nor1]
Length = 415
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 70/451 (15%), Positives = 141/451 (31%), Gaps = 41/451 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++ ++L N N +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNMSALNTYRQLSINNANTSKSLEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ G S + A+ +++ ++ ++ +D +Q E+ QL ++
Sbjct: 63 ARNAQDGISLIQTAEGALNETHSILQRMRELAVQAASDTNTASDRSELQKEVDQLAQEIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN + L + A + ++ + + +
Sbjct: 123 RIGNTTQFNTQKLLDGKFNGTFHIGANENQTLTLSINDMRSYNLGVTGDV---------- 172
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T D + D +G I T TF
Sbjct: 173 TIKETGTLAAGDFADGTYTVAKANDGTYQLLDVTGNIVATSTDAKTYKNVLDTTKTITFT 232
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ V A A + SG ++ + AT + ++
Sbjct: 233 NTVTSGKVIVSGTNADAEATVATANSGLEAGTYTYDATNKVLKDAG-------------- 278
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
V S +D G + + T + + A
Sbjct: 279 --------------GNVVAVSSDGTKFTVGGTNVLDLGSNALADGDTVVIHGVDITSRDA 324
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ++ I+ ++ + K+G+ +R+ + + + + R+ D DMA E
Sbjct: 325 ANKAITTIEKALEIVSDERAKMGAYQNRLEHTINNLSTSSENLTAAESRIRDVDMAKEMM 384
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A L+ N +L L R
Sbjct: 385 NFQKNSILAQAAQAMLAQANQQPQGVLQLLR 415
>gi|325274787|ref|ZP_08140817.1| flagellin domain-containing protein [Pseudomonas sp. TJI-51]
gi|324100084|gb|EGB97900.1| flagellin domain-containing protein [Pseudomonas sp. TJI-51]
Length = 474
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 70/472 (14%), Positives = 136/472 (28%), Gaps = 22/472 (4%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ L + R+SSGLR++ A D+AA I+ + S L
Sbjct: 3 LTVNTNIASITTQGNLTKASNAQTTSMQRLSSGLRINSAKDDAAGLQISNRLTSQINGLG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G S A+ M + D++ ++ + D KS E L ++
Sbjct: 63 QAVKNANDGISIAQTAEGAMQASTDILQKMRTLALSSATGSLSADDRKSNNDEYQALTAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI-------------------RDDNG 159
L I++ ++F G+ L G+ + + +
Sbjct: 123 LTRISQTTTFGGQKLLDGSYGTKAIQVGANANETINLSLENVAANQIGSQQVKSITASPK 182
Query: 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
+T D + D + + + + ST
Sbjct: 183 ATGLTGGDLTVTGNGQSEDFKVKAGASAKEIAKGLNGIIGGLTATASTEVSFTVDAAAST 242
Query: 220 KKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
T G D A + + N S
Sbjct: 243 TPADFTITVGDQDVTLLGVRDTASLADQLKSNSAKLGISVNYDESNGSLSIKSDTGENVA 302
Query: 280 IRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGY 339
N+ + T +A V +S S + +
Sbjct: 303 FSDTNAGAVAAIKVASKGGDGLYSTAVAIADTMIATGAVSLDSAKGYSLTSAGTAVTELF 362
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
+ + + ++ ID I + +G+ +R+ D ++ +
Sbjct: 363 GAKGTSEKTTIAQTDVTDATKAQNALAVIDKAIGSIDSVRSGLGATQNRLQTTVDNLQNI 422
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + D D ASE+ L+ QT QQ + LS N + +L L +
Sbjct: 423 QKNSTAARSTVQDVDFASETAELTKQQTLQQASTAILSQANQLPSSVLKLLQ 474
>gi|113969616|ref|YP_733409.1| flagellin domain-containing protein [Shewanella sp. MR-4]
gi|113884300|gb|ABI38352.1| flagellin domain protein [Shewanella sp. MR-4]
Length = 484
Score = 202 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 76/481 (15%), Positives = 147/481 (30%), Gaps = 33/481 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN ++M A +L N L +R+SSGLR++ A D+AA I+ M S +
Sbjct: 4 SVNTNVTSMRAQNQLNGANSKLSTSMERLSSGLRINSAKDDAAGLQISNRMTSQVNGIGV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M ++ +++ +++ D ++Q E+ LQS+L
Sbjct: 64 AMRNANDGISIAQTAEGAMQESTNILQRMRDLSLQSANGSNSSEDRAAMQKEVNALQSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ +SF G+ L G+ + + + Y D
Sbjct: 124 TRISETTSFGGQKLLDGSYGTQSFQVGAQANETISVSLKSVAAADIGAYKSDAAGSKFGG 183
Query: 180 STDGTERYGLLDRNHKIKVE------------------------------PQVLKDIDVS 209
+ + + +
Sbjct: 184 DLVTAVAGSNGSAGGNLSITQGTKTTTFATAANDTAAEVAGKINKAGTGVTATAQTTIEA 243
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
+ S + L + A V +A + +
Sbjct: 244 NLTEAFDKGLTMKVDDGNSTSSLDLTGIGNNDDLAKAINNVSGETGVSAKLENGVLTITS 303
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
S S + + TS T + V + S T S
Sbjct: 304 SKGADISFSDTATAGTGTLTLKNISADGTSSAVSTIDGTDTTVDNATAVGSVSLTASSAY 363
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRI 389
+ I + + + N+ + + ++ ID I + +G++ +R+
Sbjct: 364 SISGGIAAELTTEVAGVFAGVNSVDLSTASGSQSALAIIDGAIAGIDSQRADLGAVQNRM 423
Query: 390 HLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
+ + + ++ V R+ D D ASE+ +L+ Q Q + L+ N LSL
Sbjct: 424 NFTINNLSNIQSNVTDARSRIQDVDFASETAQLTKQQILSQTSSAMLAQANQLPQTALSL 483
Query: 450 F 450
Sbjct: 484 L 484
>gi|119898994|ref|YP_934207.1| flagellin [Azoarcus sp. BH72]
gi|119671407|emb|CAL95320.1| flagellin [Azoarcus sp. BH72]
Length = 493
Score = 202 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 71/489 (14%), Positives = 145/489 (29%), Gaps = 41/489 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L +L R+SSGLR++ A D+AA +I++ + L
Sbjct: 4 VINTNVQSLTAQRNLNTSAGSLATSLQRLSSGLRINSAKDDAAGLAISERFTAQIRGLDQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ + + D++ I+ +D +++ E+ L S+L
Sbjct: 64 ARRNANDGISLAQTAEGALQSSGDILQRIRELAVQSSNATNSASDRQALNDEVNALTSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FNG+ L ++T + + + +Y +
Sbjct: 124 NRIASTTEFNGKKLLDGSFTTATFQVGANAGQTISATTANFSTTQYGNYRIGSAAATTTG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + S ST ++ + NA
Sbjct: 184 GKGDLTMGSTANALGSTAALTTSRVAGGAITINGSAGSSTVTIAAGASAKKAAEQINAET 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A+ + +A NT+ + S A + ++ N + +
Sbjct: 244 GKTGVTASAKTEIDVTFSAANTSYKFDIASDNSTAVTISFTTGANDKDGLASAVNAFNDV 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTL---------------------------------- 325
+ T + +
Sbjct: 304 SAKTGVTARVNDAGTGITLLNANGENISLANAASGSASVNVGSTATAAGATAKATGQLVL 363
Query: 326 ----DSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
D + + + + A + ++ +D+ + K
Sbjct: 364 DSEKSFSIAAANTTDFFGATTAAGQLQKVSNLDVSSVDAAQRSIAMVDSALAAVNGQRAK 423
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
G++ SR ++ + + R+ D D A+E+ L+ Q QQ LS N
Sbjct: 424 FGALQSRFENTIANLQTTSENMSASRSRIRDTDFAAETANLTRAQILQQAGTAMLSQANA 483
Query: 442 STARILSLF 450
+LSL
Sbjct: 484 LPQNVLSLL 492
>gi|190574255|ref|YP_001972100.1| flagellin [Stenotrophomonas maltophilia K279a]
gi|190012177|emb|CAQ45800.1| putative motility flagellin protein [Stenotrophomonas maltophilia
K279a]
Length = 406
Score = 202 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 60/449 (13%), Positives = 126/449 (28%), Gaps = 47/449 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L +L R+SSGLR++ A D+AA +I++ + L
Sbjct: 4 VINTNTMSLNAQRNLSTSGSSLATTIQRLSSGLRINSAKDDAAGLAISERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
G S +A+ +S+ + + I+ + S+ LQ+++ +
Sbjct: 64 AIRNANDGISLAQVAEGSLSEVGNNLQRIRELAVQSSNAT----NSASDRKALQAEVTQL 119
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ S + + +
Sbjct: 120 VSEVDRVAKQADFNGTKLLDGSFTSQLFQV-------------------GANAGQAIAIN 160
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + + T + T G
Sbjct: 161 SVVNAKADSLGAATFANGYTGTSLAAADKATADTTYSGLQISVTPPGGTATTVTINDFTV 220
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
K +I AA +G S + V + A+ + V A T + +
Sbjct: 221 KAGESITSATSAAINNKLGETGVMASVNAGVISLASVKDGQTFSLGVSAATPPAGATAAT 280
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
+ + + + +
Sbjct: 281 IAGLGLTETSTNGGLLTGATA------------------------NFVKDLNVTTAEGAQ 316
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ +S +D ++ + +G+I +R ++ + + R+ D D A E+ L
Sbjct: 317 KALSIVDKALESVNSVRADLGAIQNRFTSVVANLQTSSENLSASRSRIRDTDFAKETAEL 376
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q QQ L+ N +LSL +
Sbjct: 377 TRTQILQQAGTAMLAQANQVPQNVLSLLQ 405
>gi|168335502|ref|ZP_02693583.1| flagellin domain protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 411
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 53/450 (11%), Positives = 134/450 (29%), Gaps = 45/450 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A+++ + L L V +++SSGLR++ A D+AA +I++ M++ L
Sbjct: 3 INTNLMAINSQRNLDVNQNELGGVMEKLSSGLRINRAGDDAAGLAISEKMRNQIKGLYQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
G S + A+ +++ +++ ++ + D K + E QL +++
Sbjct: 63 GRNAQDGISLIQTAEGALAENHEMLKRMREMAIQAMNDTYTNEDRKKLNLEAQQLITEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++A + FN + L D + + +++S
Sbjct: 123 ELAVKAEFNEQKLLTGDPTGKGLAAVANKRELLASALANYYIKVGSYESKLGSAYAIEAS 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + + + +V + ++ AA +
Sbjct: 183 TKMEQVAQSVLDLEEKISALEVKASGEKPAAAQLVLKDVSHLRIILAQRNASIAAMESSA 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + A + + + ++
Sbjct: 243 TTLKESAAILQASAFYIEATSVTDAAKQLQATMNEQVGPHEFTLQVGA------------ 290
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + + + +
Sbjct: 291 ------------------------------NNGQTINLSIKAMNATALGLSATKIDSPES 320
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+S ID ++ + ++G++ +R+ + + ++ ++ D DMA+E
Sbjct: 321 SGIALSSIDAAVEIVSRQRAELGAVQNRLEHTVKNLNNTAENLQSAESQIRDTDMAAEMV 380
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ Q + L+ N ++L L
Sbjct: 381 FFTRTNILSQASQAMLAQANQIPEQVLQLL 410
>gi|213609977|ref|ZP_03369803.1| flagellin [Salmonella enterica subsp. enterica serovar Typhi str.
E98-2068]
Length = 496
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 68/493 (13%), Positives = 127/493 (25%), Gaps = 54/493 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR--------------DDNGKVQITT 165
++ + FNG L D + A I +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKEISSKTLGLDKLNVQDAYTPKE 183
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+D T + + + DI +
Sbjct: 184 TAVTVDKTTYKNGTDPITAQSNTDIQTAIGGGATGVTGADIKFKDGQYYLDVKGGASAGV 243
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT-------------------- 265
+ D A T
Sbjct: 244 YKATYDETTKKVNIDTTDKTPLATAEATAIRGTATITHNQIAEVTKEGVDTTTVAAQLAA 303
Query: 266 -----------------SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
K+ V ++MG+ K + T +
Sbjct: 304 AGVTGADKDNTSLVKLSFEDKNGKVIDGGYAVKMGDDFYAATYDEKTGAITAKTTTYTDG 363
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
V T + S + + R E + I
Sbjct: 364 TGVAQTGAVKFGGANGKSEVVTATDGKTYLASDLDKHNFRTGGELKEVNTDKTENPLQKI 423
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 424 DAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQIL 483
Query: 429 QQLAVQALSIVNN 441
QQ L+ N
Sbjct: 484 QQAGTSVLAQANQ 496
>gi|89143094|emb|CAI29259.1| flagellin [Escherichia coli]
Length = 476
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 80/473 (16%), Positives = 151/473 (31%), Gaps = 23/473 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSESDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF---IRDDNGKVQITTIDYYLDPETVL 176
++ + FNG N L + A + D + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKNGSMKIQVGANDNQTITIDLKQIDAKTLGLDGFSVKNNDTVTT 183
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
T + I + + D + + + T T + A AN
Sbjct: 184 SAPVTAFGATTTNNIKLTGITLSTEAATDTGGTNPASIEGVYTDNGNDGTVTMATGATAN 243
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
AT A + P + T+G++ + +V+ GN N
Sbjct: 244 ATVTDANTTKATTITSGGTPVQIDNTAGSATANLGAVSLVKLQDSKGNDTDTYALKDTNG 303
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD--- 353
+T A T Y D+ D +V ++ + + D
Sbjct: 304 NLYAADVNETTGAVSVKTITYTDSSGAASSPTAVKLGGDDGKTEVVDIDGKTYDSADLNG 363
Query: 354 --------------AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
+ + +D I +G++ +R+ +
Sbjct: 364 GNLQTGLTAGGEALTAVANGKTTDPLKALDDAIASVDKFRSSLGAVQNRLDSAVTNLNNT 423
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 424 TTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 476
>gi|33590260|gb|AAQ22690.1| flagellin [Escherichia coli]
Length = 440
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 62/453 (13%), Positives = 122/453 (26%), Gaps = 19/453 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + L S
Sbjct: 124 DRVSGQTQFNGVNVLAKDNTMKIQVGANDGQTISIDLQKIDSSTLGLNGFSVSKNALETS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ ++ + +
Sbjct: 184 EA------------ITQLPNGENAPIAVKMDASVLTDLNITDASAVSLHNVTKGGVATST 231
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A + + A
Sbjct: 232 YVVQYGDKSYAASVDAGGTVKLNKADVTYNDAANGVKNATQIGSLVQVGADANNDAVGFV 291
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
N T + + + +
Sbjct: 292 TVQGKNYVANDSLVNANGAAGAEATRVTIDGDGTNQAKIELSQNGDTAATSEFAGASTN- 350
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 351 ---DPLTLLDKAIASVDKFRSSLGAVQNRLSSAVTNLNNTTTNLSEAQSRIQDADYATEV 407
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 408 SNMSKAQIIQQAGNSVLSKANQVPQQVLSLLQG 440
>gi|113969614|ref|YP_733407.1| flagellin domain-containing protein [Shewanella sp. MR-4]
gi|113884298|gb|ABI38350.1| flagellin domain protein [Shewanella sp. MR-4]
Length = 485
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 77/481 (16%), Positives = 147/481 (30%), Gaps = 33/481 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN ++M A +L N L +R+SSGLR++ A D+AA I+ M S +
Sbjct: 4 SVNTNVTSMKAQNQLNGANNRLSTSMERLSSGLRINSAKDDAAGLQISNRMTSQINGIGV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M ++ +++ +++ D ++Q E+ LQS+L
Sbjct: 64 AMRNANDGISIAQTAEGAMQESTNILQRMRDLSLQSANGSNSSEDRAAMQKELNALQSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G+ L G+ + + + Y D
Sbjct: 124 TRIADTTSFGGQKLLDGSYGTQSFQVGAQANETISVSLKSVAAADIGAYKSDAAGSKFGG 183
Query: 180 STDGTERYGLLDRNHKIKVE------------------------------PQVLKDIDVS 209
+ + + +
Sbjct: 184 DLVTAVAGSNGSAGGNLSITQGTKTTTFATAANDTAAEVAGKINKAGTGVTATAQTTIEA 243
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
+ S + L + A V +A + +
Sbjct: 244 NLTEAFDKGLTMKVDDGNSTSSLDLTGIGNNDDLAKAINNVSGETGVSAKLENGVLTITS 303
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
S S + + TS T + V + S T S
Sbjct: 304 SKGADISFSDTATAGTGTLTLKNISADGTSSAVSTIDGTDTTVDNATAVGSVSLTASSAY 363
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRI 389
+ I + + + N+ + + ++ ID I ++ +G++ +R+
Sbjct: 364 SISGGIAAELTTEVAGVFAGVNSVDISSAAGSQSALAIIDGAIASIDSSRSDLGAVQNRM 423
Query: 390 HLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
+ + ++ V R+ D D ASE+ +L+ Q Q + L+ N LSL
Sbjct: 424 SFTINNLSNIQSNVTDARSRIQDVDFASETAQLTKQQILSQTSSAMLAQANQLPQTALSL 483
Query: 450 F 450
Sbjct: 484 L 484
>gi|33590231|gb|AAQ22677.1| flagellin [Escherichia coli]
Length = 436
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 71/453 (15%), Positives = 139/453 (30%), Gaps = 23/453 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + L S
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTISIDLQKIDSSTLGLNGFSVSGQPLNVS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + + T L A + +
Sbjct: 184 DSITQITGAAGAKPVGVDFTAVAKDLTTATGKTVDVSSLTLHNTLDAKGAATSQFVVQSG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + + A + +D A +
Sbjct: 244 NDFYSASINHTDGKVTLNKADVEYTDTDNGLTTAATQKDQLIKVAADSDGSAAGYVTFQG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T + A NT ++ P SG S
Sbjct: 304 KNYATTVSKALDDNTAAKATDNKVVVELSTAKPTAQFSGASSA----------------- 346
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D I +G++ +R+ + + + R+ DAD A+E+
Sbjct: 347 ---DPLALLDKAIAQVDTFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEA 403
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ L+ N ++LSL +G
Sbjct: 404 SNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 436
>gi|238758083|ref|ZP_04619263.1| Flagellin [Yersinia aldovae ATCC 35236]
gi|238703621|gb|EEP96158.1| Flagellin [Yersinia aldovae ATCC 35236]
Length = 497
Score = 201 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 71/497 (14%), Positives = 135/497 (27%), Gaps = 46/497 (9%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++ + +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNTLSLTTQNNMNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ S G S + + + + + ++ +D KSIQ EI Q
Sbjct: 61 TQASRNANDGISLAQTTEGALGEINNNLQRVRELSVQAATGSNSSSDLKSIQDEIQQRLD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKS------VIGSFIRDDNGKVQITTIDYYLD 171
++ ++ + FNG L + A + G
Sbjct: 121 EIDRVSDQTQFNGVKVLAGNSSMKVQVGANDGETISINLEKIDSKSLGLQGFNVDGAKQA 180
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
L + + T + A
Sbjct: 181 TVNDLTSQFKATGTNNFDVGGVAYNTDINSGAVTKAGAAQYIDAGTGAFSSTTTTANAAS 240
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
A+ + + A T G + + A+ + D
Sbjct: 241 AAYTTTATAGAEATSIAAASVGKAVGDKFTAQGMEFTVKTAADANGNGVYSATVDGKSVD 300
Query: 292 TTKNSITSDP-------------------------------------GYTNSTVAKVGNT 314
T ++ T+ + T
Sbjct: 301 FTTSASTAPAGTAAEVKTSSALHTSVVGGGLTTKAAENNRAATLADLDLQGAAKTGSTLT 360
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ S T N DA + + + ++ +D +
Sbjct: 361 VNGTAYTANAKGDEITNGAGKTMFMSRTANGTTTLINEDAAASQKSTDNQLATVDKALAQ 420
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
A +G++ +R + + + R+ DAD ++E + +S QQ
Sbjct: 421 VDALRSGLGAVQNRFDSAITNLGNTINNLTSARSRIQDADYSTEVSNMSRANILQQAGTS 480
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 481 VLAQANQVPQTVLSLLR 497
>gi|170287974|ref|YP_001738212.1| flagellin domain-containing protein [Thermotoga sp. RQ2]
gi|69953675|gb|AAZ04310.1| flagellin [Thermotoga sp. RQ2]
gi|170175477|gb|ACB08529.1| flagellin domain protein [Thermotoga sp. RQ2]
Length = 513
Score = 201 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 68/511 (13%), Positives = 147/511 (28%), Gaps = 63/511 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + + Y++ +R+SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNISALNAWRNIDQTQYSMSKTLERLSSGLRINRAGDDAAGLAISEKMRGQIKGLNMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ D IQ+E+ QL+ ++
Sbjct: 63 IKNAQDAISLIQTAEGALTEVHSILQRMRELAVQAASDTNTDVDRYQIQAELDQLREEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IAR + FN L + S V+ + + + + +
Sbjct: 123 RIARTTEFNTMKLLDGKIESFRPQADVKVVTGGNFNLQASQSLNGLSIGNAQGIISSAKA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ L V + + S + + LK D
Sbjct: 183 VNLVINGVTLGDITISASGSTVKIIDRGATIKSFQVTSEAIASTSVITVGGLKFEFVVSD 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ G + + + + + T+ + + + + N
Sbjct: 243 ASLGTSPVRAYVDSVKISIATSVSVTFDDVHEGSYVVEVGQFVGAGTSSLDVRVNYFNET 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ V +Y + ++ +V T + +++ L
Sbjct: 303 GLASALVVDFSQGNAFYGTVSGSISYDGSKFAFDLTGLRGIVFTWTTGVYDINSFGGALP 362
Query: 361 MEEMVSF-----------------------IDTQIKCATAAAGK-IG--------SISSR 388
MEE++ I +G + +
Sbjct: 363 MEEVIDSGVVRAEERWYQDTSLVFQIGANEGHNMIAGLDDMRSSALGLTPDSLKVTDQNS 422
Query: 389 IHLQ----------------------------EDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + + + R+ DADMA E
Sbjct: 423 AERAIMVIDAAIHKVSSARAQLGAVQNRLEHTISNLGVAAENLTAAESRIRDADMAKEMM 482
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q Q ++ L+ N +L L R
Sbjct: 483 EFTKQQILLQSSMAMLAQSNTLPQNVLQLMR 513
>gi|218902874|ref|YP_002450708.1| A-type flagellin [Bacillus cereus AH820]
gi|218538509|gb|ACK90907.1| A-type flagellin [Bacillus cereus AH820]
Length = 447
Score = 201 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 68/451 (15%), Positives = 150/451 (33%), Gaps = 9/451 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++ + +R + DR+SSG R+++A+D+AA +IA M++ L+
Sbjct: 3 INTNINSLRTQEYMRQNQAKMSNSMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + + +++ +++ + ++Q E +LQ Q+
Sbjct: 63 ANNTQDGMSLIRTADSALGSVSNILLRMRDLANQSANGTNTSDNQAAMQKEFAELQKQIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L+++ + ++ S I + + ++ ++
Sbjct: 123 YIADNTQFNDKNLLQSNSSINIQTLDSSDGNQQIGIELKSASLKSLGIEDLAIGASVNPL 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T K + T K +
Sbjct: 183 AKATVEASEAYDKAKADTAA------FAKSIADTAATGTGAAKADAAAVDAYIKEADPTA 236
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + NT K + + T + + N+ +
Sbjct: 237 KGNLYTGLTADQKKLADEHNTLKAAEDGKKAELTMATTKSTADGTAKGLVDAYDNAKSDA 296
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ Y DT + + D KE + + A
Sbjct: 297 MNDPKAKAYLEAKMAYEKDTSNVANKQKLDSTKEAMEKDPASKDLVVKLDAAKAAATNGT 356
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ VS ID +K +G+ +R+ + +K ++ ++ DADMA E +
Sbjct: 357 PLDAVSKIDAALKTVADNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMS 416
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + + + LS N + + L +
Sbjct: 417 EMTKFKILNEAGISMLSQANQTPQMVSKLLQ 447
>gi|30059930|gb|AAP13337.1| FliC [Escherichia coli]
Length = 436
Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats.
Identities = 71/453 (15%), Positives = 134/453 (29%), Gaps = 23/453 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A L
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTIS--------------IDLQKIDSSTLG 169
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ L+ I V V + T + L N
Sbjct: 170 LNGFSVSAQSLNVGDSITQITGAAGTKPVGVDFTAVAKDLTTATGKTVDVSSLTLHNTLD 229
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A V + + + + G + + + +
Sbjct: 230 AKGAATAQFVVQSGSDFYSASIDHASGEVTLNKADVEYKDTDNGLTTAATQKDQLIKVAA 289
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
D + +Y + D + T T + +
Sbjct: 290 DSDGAAAGYVTFQGKNYATTAPAALNDDTTATATANKVVVELSTATPTAQFSGASSA--- 346
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 347 ---DPLALLDKAIAQVDTFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEV 403
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 404 SNMSKAQIIQQAGNSVLSKANQVPQQVLSLLQG 436
>gi|154002|gb|AAA27085.1| phase-1 flagellin [Salmonella enterica subsp. enterica serovar
Gallinarum]
Length = 494
Score = 200 bits (507), Expect = 5e-49, Method: Composition-based stats.
Identities = 71/491 (14%), Positives = 137/491 (27%), Gaps = 53/491 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ EI Q ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDL----------------------------------GSSTASI 145
++ + FNG L D G A++
Sbjct: 124 DRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATV 183
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
Y +D + + + ++ + N ++ +
Sbjct: 184 GDLKSSFKNVTGYDTYAAGADKYRVDINSGAVVTDAAAPDKVYVNAANGQLTTDDAENNT 243
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG- 264
T T + K + K + + +TT
Sbjct: 244 AVDLFKTTKSTAGTAEAKAIAGAIKGGKEGDTFDYKGVTFTIDTKTGDDGNGKVSTTING 303
Query: 265 ---------------TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + + + + + T S N+ V
Sbjct: 304 EKVTLTVADIATGATDVNAATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVK 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ K ++ N DA K + ++ ID
Sbjct: 364 GESKITVNGAEYTANATGDKITLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+I +R + + R+ DAD A+E + +S Q Q
Sbjct: 424 SALSKVDAVRSSLGAIQNRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQ 483
Query: 430 QLAVQALSIVN 440
Q L+ N
Sbjct: 484 QAGTSVLAQAN 494
>gi|221635614|ref|YP_002523490.1| flagellin [Thermomicrobium roseum DSM 5159]
gi|221157667|gb|ACM06785.1| flagellin [Thermomicrobium roseum DSM 5159]
Length = 402
Score = 200 bits (507), Expect = 5e-49, Method: Composition-based stats.
Identities = 70/451 (15%), Positives = 145/451 (32%), Gaps = 54/451 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++A + L + L +++SSGLR++ AAD+AA SI++ +++ +
Sbjct: 3 IYNNVNAVNAQRNLSITGFALAKSIEKLSSGLRINRAADDAAGLSISEKLRAQIRGVMQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ D ++I E+ L+ ++
Sbjct: 63 MRNAQDGVSMIQTAEGALNEVHSMLQRMRELAVQAANDTLTTEDRRAIYQELDNLRVEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I +SFNG+N L L ++ A+ ++ +G+ + + +D S
Sbjct: 123 AIVARTSFNGKNLLDGTLVTTVAAGSEIKVGTTLTGGGETAHVFALDVSGAVPGRTYTFS 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ T L R+ + + +I + T++G
Sbjct: 183 YNSTTDTLTLTRSGDNVSQSITISNIAAGGSQVLNFSALGIKLTVTSTGGITADNLGAAL 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A TI A ++
Sbjct: 243 TAGATDTITTHNGGGSANMQVGPNSTH--------------------------------- 269
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
D R + + + + A
Sbjct: 270 ------------------SFNVNFSDVRVSGTASAMTTLDSAITAFSTSLSGLNSAQVTA 311
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ +++ +D I +G++ +R+ + + + + R+ D DMA E
Sbjct: 312 AQNLINALDGAISYVNEVRSYLGAVQNRLEHAIANLGVQHENLTASESRIRDVDMAKEMV 371
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q QQ V LS N +L L R
Sbjct: 372 IFTRNQILQQAGVAVLSQANAMPQSVLQLLR 402
>gi|30059914|gb|AAP13329.1| FliC [Escherichia coli]
Length = 426
Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats.
Identities = 71/453 (15%), Positives = 140/453 (30%), Gaps = 33/453 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI +++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + + A G I D K+ + +
Sbjct: 124 DRVSGQTQFNGVNVLAKNGSLNIQVGAN--DGQTISIDLQKIDSSALGLSGFSVAGGALK 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+D + G DI ++ S + GA + ++
Sbjct: 182 LSDTVTQVGDGSAAPVKVDLDAAATDIGTALGQKVNASSLTLHNILDKDGAATENYVVSY 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A++ + T + + + + V T
Sbjct: 242 GSDNYAASVADDGTVTLNKTDITYSGGDITGATKDDTLIKVAANSDGEAVGFATVQGKNY 301
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + T + T D
Sbjct: 302 EITDGVKNQSTAAPTDIAQTIDLDTADEFTGASTA------------------------- 336
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 337 ---DPLALLDKAIAQVDTFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEV 393
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ L+ N ++LSL +G
Sbjct: 394 SNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 426
>gi|222112256|ref|YP_002554520.1| flagellin domain-containing protein [Acidovorax ebreus TPSY]
gi|221731700|gb|ACM34520.1| flagellin domain protein [Acidovorax ebreus TPSY]
Length = 493
Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats.
Identities = 75/491 (15%), Positives = 153/491 (31%), Gaps = 41/491 (8%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I TN ++++A + L +L R+SSGLR++ A D+AA +I++ S L+
Sbjct: 3 STINTNVASLTAQRNLGMSQASLNTSIQRLSSGLRINSAKDDAAGLAISERFTSQIRGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S + + M A D++ ++ +D +++Q E+ QL ++
Sbjct: 63 QAARNANDGISLAQVTEGAMKSAGDILQRVRELAVQSANASNSASDRQALQQEVGQLVAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTID----------- 167
L IA+ + FNG+ L G+ + + + I +
Sbjct: 123 LDRIAQTTEFNGQKLLDGTFGTQQFQVGANANQTIIAATANLRTSVYGNNQNLSANGAGP 182
Query: 168 ---------------------------YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
+ T + +
Sbjct: 183 AAQAVATTPSAVNGVTVGAVAINGSIGSATVSVVADSSAKTIADQVNAVQANTGVTASAR 242
Query: 201 QVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPN 260
++ + + + T S A A + A
Sbjct: 243 TEVELNIATAGSYTLALLGDNSTPQTVSFTLPSTTGADRLSAAVQSINDQSAKTGITAAL 302
Query: 261 TTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDT 320
T+G + + + + TK T+ +Y +
Sbjct: 303 NTTGDRVILTNATGNNIVVGDTAVVNAGNVVLTKLQADGTAAGAAVTLTADATANYSTVS 362
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
LDS+K S + + E + +D+ + +
Sbjct: 363 GYLILDSQKSFSFTSASTILANGSSDLKRVADLDVTTFKKATEALKTVDSSLAFISGERA 422
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
K+G++ SR + + + + R+ DAD A+E+ LS Q QQ ++ N
Sbjct: 423 KLGALQSRFETSIASLNITSENLSASRSRIQDADFAAETANLSRTQILQQAGTAMVAQAN 482
Query: 441 NSTARILSLFR 451
+L+L +
Sbjct: 483 QIPQGVLALLK 493
>gi|6009835|dbj|BAA85082.1| flagellin [Escherichia coli]
gi|30059852|gb|AAP13298.1| FliC [Escherichia coli]
Length = 436
Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats.
Identities = 79/453 (17%), Positives = 142/453 (31%), Gaps = 23/453 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + L S
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTISIDLQKIDSSTLGLNGFSVSGQSLNVS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ K + V + ++T K S L
Sbjct: 184 DS------------ITQITGAAGTKPVGVDFTAVAKDLTTATGKTVDVSSLTLHNTLDAK 231
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + A+ N T G V + T + + K + S
Sbjct: 232 GAATSQFVVQSGNDFYSASINHTDGKVTLNKADVEYTDTDNGLTTAATQKDQLIKVAADS 291
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
D + N V T + K ++ S
Sbjct: 292 DGSAAGYVTFQGKNYATTVSTALDDNTAAKATDNKVVVELSTAKPTAQFSGA-------- 343
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 344 SSADPLALLDKAIAQVDTFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEV 403
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 404 SNMSKAQIIQQAGNSVLSKANQVPQQVLSLLQG 436
>gi|225376314|ref|ZP_03753535.1| hypothetical protein ROSEINA2194_01954 [Roseburia inulinivorans DSM
16841]
gi|225211690|gb|EEG94044.1| hypothetical protein ROSEINA2194_01954 [Roseburia inulinivorans DSM
16841]
Length = 426
Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats.
Identities = 75/453 (16%), Positives = 140/453 (30%), Gaps = 31/453 (6%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M + N +A S++L ++++SG +++ +AD+AA I++ M+S L
Sbjct: 1 MQVLAHNLAAQFTSRQLTMTTDKKTKSSEKLASGYKINRSADDAAGLQISEKMRSQIRGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQS 117
+ S+ I G S +A ++++ V+ ++ D +IQ EI QL
Sbjct: 61 NQASENIQDGISLCQVADGALNESHAVLQRMRELSVQAANDTNSDEDRNAIQQEIDQLTK 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +SFN E + G S ++ + S + Y +
Sbjct: 121 EVDRIANDTSFNEEIYPLKGTGLSGNDLSGKIGLSLANLSLRVNNLKPYTYTTSKGQEFI 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
D L D +
Sbjct: 181 DLKFKLLPSTSKLQICTLNGTVIYEEYATDGLDKVKNNYEIGDH---------------R 225
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ + A N TS T+ + + + + N + V ATT+
Sbjct: 226 YYSSLSAPNSYFTSGGATFGFWNQTSVTNAEVNEWLNHTIFTYWIENDNSMVHATTQRDN 285
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
S+ N + L + I
Sbjct: 286 NSNTSNNNFKQIWIQMGAQKDQGMFLNLVNATAKGVGITDPAL-------------DVTN 332
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+S +D I ++ G+ +R+ + + + R+ D DMA+
Sbjct: 333 YANASTSISRLDDAISKVSSYRSSFGAQQNRLEHGKLVDDNTAENTQNAELRIRDVDMAN 392
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
E S +Q+ L+ N +T ILSL
Sbjct: 393 EMVEYSKNNILEQVGQAMLAQANQNTQNILSLL 425
>gi|254780531|ref|YP_003064944.1| flagellin domain-containing protein [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040208|gb|ACT57004.1| flagellin domain-containing protein [Candidatus Liberibacter
asiaticus str. psy62]
Length = 452
Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats.
Identities = 452/452 (100%), Positives = 452/452 (100%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL
Sbjct: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR
Sbjct: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS
Sbjct: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD
Sbjct: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD
Sbjct: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA
Sbjct: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST
Sbjct: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
RLSALQTQQQLAVQALSIVNNSTARILSLFRG
Sbjct: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
>gi|281178986|dbj|BAI55316.1| flagellar protein FliC [Escherichia coli SE15]
Length = 436
Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats.
Identities = 79/453 (17%), Positives = 142/453 (31%), Gaps = 23/453 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + L S
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTISIDLQKIDSSTLGLNGFSVSGQSLNVS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ K + V + ++T K S L
Sbjct: 184 DS------------ITQITGAAGAKPVGVDFTAVAKDLTTATGKTVDVSSLTLHNTLDAK 231
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + A+ N T G V + T + + K + S
Sbjct: 232 GAATSQFVVQSGNDFYSASINHTDGKVTLNKADVEYTDTDNGLTTAATQKDQLIKVAADS 291
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
D + N V T + K ++ S
Sbjct: 292 DGSAAGYVTFQGKNYATTVSTALDDNTAAKATDNKVVVELSTAKPTAQFSGA-------- 343
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 344 SSADPLALLDKAIAQVDTFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEV 403
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 404 SNMSKAQIIQQAGNSVLSKANQVPQQVLSLLQG 436
>gi|110164831|gb|ABG49497.1| FlaB [Clostridium botulinum]
Length = 491
Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats.
Identities = 76/489 (15%), Positives = 142/489 (29%), Gaps = 41/489 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNLNAMNAHRQMGMNTVNSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S S + A+ G+++ ++ ++ D IQ EI QL S++
Sbjct: 63 SRNSQDAISMIQTAEGGLNETHSILQRMRELGVQAGNDTNTDKDRLEIQKEINQLTSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGS-------------------FIRDDNGKV 161
I + FN ++ L+ + + V G + D K+
Sbjct: 123 RIGNTTEFNNQSVLKGNADVKATNTTPGVKGEAAVTEVAGIYELSGXLTAGDVEIDGKKL 182
Query: 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKK 221
I D + D + K+ + + + +
Sbjct: 183 TIAGSDQDALYTDLKAKIEADTDLKAKYTVAAGTNKLTLTQKTGKESPTAPTATGATITE 242
Query: 222 FKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR 281
T A + A + + + + + + K A
Sbjct: 243 KTAGVTGKAEVTAVANVDEISGELKAGEITVDGKKLTIAGADQDALYKDLKAKIEADTDL 302
Query: 282 MGNSDIWVRATTKNSIT-------------------SDPGYTNSTVAKVGNTHYYVDTES 322
+ N IT T + D +
Sbjct: 303 KAKYTVGAYTDKDNKITLTQIGGKESSTGVKVQVAEKSFTMQVGANENQTMTLAFEDMRA 362
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKI 382
L + N N + V+ I I +A K+
Sbjct: 363 NNLGLTGTGDGYTKASTVTNGTNNDNVENALDVSNSKNAGNAVTKIQDAINQVSAERSKL 422
Query: 383 GSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNS 442
G+ +R+ + + + + R+ D DMA E S Q A L+ N
Sbjct: 423 GAYQNRLEHTINNLGTSSENLTSAESRIRDVDMAKEMMTFSKNNILAQAAQAMLAQANQQ 482
Query: 443 TARILSLFR 451
+L L R
Sbjct: 483 PQGVLQLLR 491
>gi|33590233|gb|AAQ22678.1| flagellin [Escherichia coli]
Length = 426
Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats.
Identities = 71/453 (15%), Positives = 140/453 (30%), Gaps = 33/453 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI +++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + + A G I D K+ + +
Sbjct: 124 DRVSGQTQFNGVNVLAKNGSLNIQVGAN--DGQTISIDLQKMDSSALGLSGFSVAGGALK 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+D + G DI ++ S + GA + ++
Sbjct: 182 LSDTVTQVGDGSAAPVKVDLDAAATDIGTALGQKVNASSLTLHNILDKDGAATENYVVSY 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A++ + T + + + + V T
Sbjct: 242 GSDNYAASVADDGTVTLNKTDITYSGGDITGATKDDTLIKVAANSDGEAVGFATVQGKNY 301
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + T + T D
Sbjct: 302 EITDGVKNQSTAAPTDIAQTIDLDTADEFTGASTA------------------------- 336
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 337 ---DPLALLDKAIAQVDTFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEV 393
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ L+ N ++LSL +G
Sbjct: 394 SNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 426
>gi|238925739|ref|YP_002939256.1| hypothetical protein EUBREC_3396 [Eubacterium rectale ATCC 33656]
gi|238877415|gb|ACR77122.1| hypothetical protein EUBREC_3396 [Eubacterium rectale ATCC 33656]
Length = 413
Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats.
Identities = 62/452 (13%), Positives = 133/452 (29%), Gaps = 43/452 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N A +A++ L +++SSG R++ AAD+AA +I++ M+ L
Sbjct: 2 VVQHNMQAANANRMLNVTTGQQAKSTEKLSSGYRINRAADDAAGLTISEKMRKQIKGLDR 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S V A+ +++ ++ + TD K+IQ E+ QL +++
Sbjct: 62 ASTNAQDGVSAVQTAEGALTEVHSMLQRMNELAVQSANGTNSATDRKAIQDEVNQLSTEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FN L+ D ++ + + + + T +D L +
Sbjct: 122 DRVSETTKFNETYLLKGDSKTAAKANFMKSGYTLPANLASEGSNTKDIDSVDKLKAALAA 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T + + + V
Sbjct: 182 GTKIYTEASANAGDKQDASKIAVNGKDYAY------------------------------ 211
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
V ++ + + +AT + A N +
Sbjct: 212 ----------VTKLYDANGKQVSADNIMNSKNADGTTATNYYTTDGGAAAAAAKNNITIT 261
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
++T + + + + +
Sbjct: 262 AANAKDATKGFIQQFDVNGNLSFNLHVGADSSSDNKIKVEIASMDSKGIGIKNIKVDTED 321
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ I I ++ +G++ +R+ + + + + R+ D DMA E
Sbjct: 322 DATAAIDRISEAISKVSSQRSSLGAVQNRLEHTINNLDNVSENTTSAESRIRDTDMAKEM 381
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q L+ N S +LSL +
Sbjct: 382 VNYSKNNILAQAGQSMLAQANQSNQGVLSLLQ 413
>gi|297531371|ref|YP_003672646.1| flagellin domain protein [Geobacillus sp. C56-T3]
gi|297254623|gb|ADI28069.1| flagellin domain protein [Geobacillus sp. C56-T3]
Length = 427
Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats.
Identities = 74/451 (16%), Positives = 149/451 (33%), Gaps = 29/451 (6%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++L N +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTYRQLTFNNTQASKNIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ TD +Q E+ QL +L
Sbjct: 63 SKNSQDAISLIQTAEGALNETHSILQRMRELAVQAANDTNTATDRVELQKEVDQLAQELS 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L + A + + + + D
Sbjct: 123 RISSTTEFNTQKLLNGTFSGTFHIGANESQNIKLNISDMSAFALGVAGDVTTVISDADGD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T+ L D V T++T + TS K TF
Sbjct: 183 ASFTKNGTLQDIADGTYQIQTTNTGSYKMVDSNGNTVATSNDGKSWTSAIGEKDDTFTFT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A T+ + + + +G ++ + A+ + +S+
Sbjct: 243 AAVKAGTVTLSGNGTKVSATGSLTNNGLQAGTYTYVASENALKDSNG------------- 289
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T+S K+ +D+ V + +
Sbjct: 290 -------------NAVAWTTDSGVTFIDKNGKVVLDTTGVTVADGDSFTVGGVDITSQAT 336
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ V+ I+ I+ +A K+G++ +R+ + + + + R+ D DMA E
Sbjct: 337 ANKAVTTINRAIETVSAERAKLGAVQNRLEHTINNLGTSAENLTAAESRIRDVDMAKEMM 396
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q A L+ N +L L R
Sbjct: 397 EFTKNNILAQAAQAMLAQSNQLPQAVLQLLR 427
>gi|323199278|gb|EFZ84373.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 556150-1]
Length = 479
Score = 199 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 69/479 (14%), Positives = 133/479 (27%), Gaps = 53/479 (11%)
Query: 26 VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAI 85
+R+SSGLR++ A D+AA +IA S+ L+ S G S + +++
Sbjct: 1 SAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTTEGALNEIN 60
Query: 86 DVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTDL---- 138
+ + ++ SIQ EI Q ++ ++ + FNG L D
Sbjct: 61 NNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKI 120
Query: 139 ------------------------------GSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
G A++ Y
Sbjct: 121 QVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDTYAAGANKY 180
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
+D + + + ++ + N ++ + T + K +
Sbjct: 181 RVDINSGAVVTDDAAPDKVYVNAANGQLTTDDAENNTAVNLFKTTKSAAGTDEAKAIAGA 240
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG----------------TSGSKSPS 272
K + + +TT + +
Sbjct: 241 IKGGKEGDTFDYKGVTFTIDTKTGDDGNGKVSTTINGEKVTLTVADIATGATDVNAATLQ 300
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + + T S N+ V + K
Sbjct: 301 SSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKGESKITVNGAEYTANAAGDKVTL 360
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
++ N DA K + ++ ID+ + A +G+I +R
Sbjct: 361 AGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGAIQNRFDSA 420
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R+ DAD A+E + +S Q QQ L+ N +LSL R
Sbjct: 421 ITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQQAGTSVLAQANQVPQNVLSLLR 479
>gi|834003|gb|AAB33952.1| flagellin {alternatively spliced} [Salmonella typhimurium, SJW61,
Peptide Mutant, 405 aa]
Length = 405
Score = 199 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 69/452 (15%), Positives = 128/452 (28%), Gaps = 52/452 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 123 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y
Sbjct: 183 TAATVTGYADTTIALD-------------------------------------------- 198
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+T L AA + + + + D + AT +
Sbjct: 199 -----NSTFKAALTAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSI 253
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T T + + S + + A
Sbjct: 254 SINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAAT 313
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
E + ID + +G++ +R + + + + R+ D+D A+E
Sbjct: 314 TTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEV 373
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 374 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 405
>gi|150388567|ref|YP_001318616.1| flagellin domain-containing protein [Alkaliphilus metalliredigens
QYMF]
gi|149948429|gb|ABR46957.1| flagellin domain protein [Alkaliphilus metalliredigens QYMF]
Length = 399
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 60/450 (13%), Positives = 138/450 (30%), Gaps = 57/450 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N AM+ ++L N +++SSG R++ A D+AA SI++ M+ L
Sbjct: 3 INNNLMAMNTHRQLGSAQANGAKSMEKLSSGFRINRAGDDAAGLSISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D ++Q+E+ QL +++
Sbjct: 63 SRNAQDGISLIQTAEGALNETHSILQRMRELSVQSSNDTNVQEDRDALQAEMDQLATEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L + A ++ + + L +
Sbjct: 123 RIADNTEFNTKNLLGGEFEGKFHIGANEGQNMELKIAAMDADSLKVQGEVYEAQDLDNV- 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+
Sbjct: 182 --------------------------------------------------DNVQIQSRTG 191
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + + A +TT+ + A + + I +
Sbjct: 192 EDVTVEFAAIQVADGAAVTSTTAAWNTDGDVLTVTLAQAAPTSTGSTGLVQASDQDIMNA 251
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ V + T S ++++ V + + + +
Sbjct: 252 INAAGGEYGLSAIANGTVSGTAITNGSAGIADVDLNNWELDVEASAASGIDISSQAKADE 311
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ T ++ + +G++ +R+ + + + ++ R+ D DMA E
Sbjct: 312 AITTIN---TALERVSKERSMLGAVQNRLEHTISNLDNVSENLQASESRVRDVDMAKEMM 368
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
L+ QQ + L+ N + +L L
Sbjct: 369 ELTKQNILQQASTAMLAQANQAPQSVLQLL 398
>gi|114562350|ref|YP_749863.1| flagellin domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114333643|gb|ABI71025.1| flagellin domain protein [Shewanella frigidimarina NCIMB 400]
Length = 482
Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 73/478 (15%), Positives = 146/478 (30%), Gaps = 30/478 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN ++M A L + +R++SGLR++ A D+AA I+ M S +
Sbjct: 4 SVNTNVTSMKAQGNLNKAQSATSMSMERLASGLRINSAKDDAAGLQISNRMTSQINGIGV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ +S++ +++ +++ +D S+Q+E++ LQ +L
Sbjct: 64 AIRNANDGISIAQTAEGALSESTNILQRMRDLSLQSANGSNSASDRASMQTELSALQEEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT-------------- 165
I+ ++F G+ L GS + +
Sbjct: 124 TRISDTTAFGGQKLLDGTYGSQAFQVGSDANQTISISLRSSAAENIGGQKITGAGTAAGT 183
Query: 166 -------------IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYD 212
+ T + + +E
Sbjct: 184 TALTTGAPAFGAGTLTITNDATGQAGLVSAAVTDTANTYASKINALEGTTGVSARAHTEI 243
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ T + A + + A + T+
Sbjct: 244 EITSDYAAALTGGTIGSSRTGAPTTDISSVTSAQGLVDTINADSSNTGLTAKLDAESGNV 303
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
AS + + + T +S+ + + A V + T S +
Sbjct: 304 RIASLDGDNITTTQVGGATFTIDSVVNGVADGAAIDAAVAAGTTSLGAIELTSTSSFSMV 363
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ +G + ++ + +S ID I + +G++ +R+
Sbjct: 364 ESAVTGAFNGLTSSDDLVSSIDITTASGAQSAISAIDGAIATIDSQRADLGAVQNRMEFT 423
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ +++ V R+ D D ASES LS Q Q + L+ N LSL
Sbjct: 424 ISNLSNIQNNVTDARSRIQDVDFASESAELSKQQILSQASSSMLAQANQLPQVALSLL 481
>gi|313904256|ref|ZP_07837634.1| flagellin domain protein [Eubacterium cellulosolvens 6]
gi|313470806|gb|EFR66130.1| flagellin domain protein [Eubacterium cellulosolvens 6]
Length = 413
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 65/452 (14%), Positives = 133/452 (29%), Gaps = 43/452 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N A +A + L L +++SSG R++ AAD+AA +I++ M+S L
Sbjct: 2 VIQHNIPATNAYRNLTSNRSGLSKNLEKLSSGFRINRAADDAAGLAISEAMRSKINGLDQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
+ + + +++ ++ + T + SIQ E+ +L +++
Sbjct: 62 ATANANDAIGLIQTEEGALTETHSMLQRMTTLATQAANGTYNSTSRASIQKEMDELGNEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + +NG L D + + D +
Sbjct: 122 DRIANNTDYNGIKPLAEDSNKGSDGKNNGTKLNMTMQIGPTKGEVLDLKGQDMTLKGIFK 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
D G + + + + K + + D L
Sbjct: 182 DLDTVSSSGASVTANALNADSESAKALATLINDRKVDKDQAGKDLTNAVRDAANRNGVKV 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
++ + N TSG + + A +A +S V+
Sbjct: 242 ADNFKVSVSVAGSTTTVSIANATSGMFDTSTAGKAITAALKDAYDSLDGVQK-------- 293
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
E + + +
Sbjct: 294 --------------------------------SNEYPENAHTDGKEYIQITSYSGEDVTA 321
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+V I + I ++ ++G+ +R+ + +++ + R+ D DMA E
Sbjct: 322 NANRVVKNIQSAIDHVSSYRAELGAKQNRLEHTINNLQVTSENTTAAESRIRDTDMAKEM 381
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q A L+ N S +LSL +
Sbjct: 382 AAYTKNNILSQAAQSMLAQANQSGQGVLSLLQ 413
>gi|77463641|ref|YP_353145.1| flagellar filament protein [Rhodobacter sphaeroides 2.4.1]
gi|77388059|gb|ABA79244.1| Flagellar filament protein [Rhodobacter sphaeroides 2.4.1]
Length = 493
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 68/493 (13%), Positives = 148/493 (30%), Gaps = 41/493 (8%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT+I TN A++A + +N R+S+GLR++ A D+AA +I + M + L
Sbjct: 1 MTTINTNIGAIAAQANMTKVNDQFNTAMTRLSTGLRINAAKDDAAGMAIGEKMTAQVMGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQS 117
+ G + VD + + ++ ++ D S+ +E QL +
Sbjct: 61 NQAIRNAQDGKNLVDTTEGAHVEVSSMLQRLRELAVQSSNDTNTAADRGSLAAEGKQLIA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRD--------------------- 156
++ +A ++FNG L I + +
Sbjct: 121 EINRVAESTTFNGMKVLDGSFTGKQLQIGADSGQTMAINVDSAAATDIGAHKISSASTVV 180
Query: 157 -----------------DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
G I L S + ++ K +
Sbjct: 181 ADAALTDTTIAASTDITITGFAGSDKITTAAGDSARTLAESINKKTSSTGVEATATTKAQ 240
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
D + + + + A
Sbjct: 241 LSGFTKGDTVTFKIGTADGNEVSIGDVSITDASDVRGLRDAINAVSGQTGITAAMAKDDN 300
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ T + + S + +++ + T+ + + +
Sbjct: 301 SKIVLTDANGDDIMLTSVSSTTADFKVTALKSDGTATATNVDIGFGTNKSAGVTGQVDLV 360
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + + + + + + ID + + +
Sbjct: 361 STKSFSVAASVSGSATAHFANANEGSELSSVAEIDLSTAEGASAAIGVIDVALSKISQSR 420
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
++G++S+R+ + + +V+ +++DAD A+EST L+ Q Q + L+
Sbjct: 421 SELGAVSNRLDSTISNLTNISTSVQAAKSQVMDADFAAESTNLARSQILSQASTAMLAQA 480
Query: 440 NNSTARILSLFRG 452
N+S +LSL RG
Sbjct: 481 NSSKQNVLSLLRG 493
>gi|126462473|ref|YP_001043587.1| flagellin domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|221639484|ref|YP_002525746.1| Flagellin domain-containing protein [Rhodobacter sphaeroides KD131]
gi|332558497|ref|ZP_08412819.1| FliC [Rhodobacter sphaeroides WS8N]
gi|2370451|emb|CAA75001.1| flagellar filament protein [Rhodobacter sphaeroides]
gi|126104137|gb|ABN76815.1| flagellin domain protein [Rhodobacter sphaeroides ATCC 17029]
gi|221160265|gb|ACM01245.1| Flagellin domain protein [Rhodobacter sphaeroides KD131]
gi|332276209|gb|EGJ21524.1| FliC [Rhodobacter sphaeroides WS8N]
Length = 493
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 68/493 (13%), Positives = 148/493 (30%), Gaps = 41/493 (8%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT+I TN A++A + +N R+S+GLR++ A D+AA +I + M + L
Sbjct: 1 MTTINTNIGAIAAQANMTKVNDQFNTAMTRLSTGLRINAAKDDAAGMAIGEKMTAQVMGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQS 117
+ G + VD + + ++ ++ D S+ +E QL +
Sbjct: 61 NQAIRNAQDGKNLVDTTEGAHVEVSSMLQRLRELAVQSSNDTNTAADRGSLAAEGKQLIA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRD--------------------- 156
++ +A ++FNG L I + +
Sbjct: 121 EINRVAESTTFNGMKVLDGSFTGKQLQIGADSGQTMAINVDSAAATDIGAHKISSASTVV 180
Query: 157 -----------------DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
G I L S + ++ K +
Sbjct: 181 ADAALTDTTIAASTDITITGFAGSDKITTAAGDSARTLAESINKKTSSTGVEATATTKAQ 240
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
D + + + + A
Sbjct: 241 LSGFTKGDTVSFKIGTADGNEVSIGDVSITDASDVRGLRDAINAVSGQTGITAAMAKDDN 300
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ T + + S + +++ + T+ + + +
Sbjct: 301 SKIVLTDANGDDIMLTSVSSTTADFKVTALKSDGTATATNVDIGFGTNKSAGVTGQVDLV 360
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + + + + + + ID + + +
Sbjct: 361 STKSFSVAASVSGSATAHFANANEGSELSSVAEIDLSTAEGASAAIGVIDVALSKISQSR 420
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
++G++S+R+ + + +V+ +++DAD A+EST L+ Q Q + L+
Sbjct: 421 SELGAVSNRLDSTISNLTNISTSVQAAKSQVMDADFAAESTNLARSQILSQASTAMLAQA 480
Query: 440 NNSTARILSLFRG 452
N+S +LSL RG
Sbjct: 481 NSSKQNVLSLLRG 493
>gi|291518678|emb|CBK73899.1| Flagellin and related hook-associated proteins [Butyrivibrio
fibrisolvens 16/4]
Length = 486
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 78/484 (16%), Positives = 142/484 (29%), Gaps = 36/484 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N A +AS+ L N +++SSG +++ AAD+AA SI++ M+ L
Sbjct: 2 VVQHNMQAANASRMLNITTGNQSKSTEKLSSGYKINRAADDAAGLSISEKMRKQIRGLDQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
S G S V A+ +++ ++ + D SIQ EI QL +++
Sbjct: 62 ASTNAQDGVSAVQTAEGALTEVHSMLQRMNELAVQASNGTNSESDRSSIQDEINQLTTEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FN L+ D G T IA G + T L +
Sbjct: 122 DRVAETTKFNETYLLKGDYGKKTIQIAAHDAGLEGTLTQNTTKATFTITALAMGDNVTIG 181
Query: 180 STDGTERYGLLDRNH---------------------------------KIKVEPQVLKDI 206
T T D +
Sbjct: 182 GTKYTIGVNGADTATMLNNAKTVLGAGTAINPSAGEVLKIDGKSFTITTGDTNVATSELK 241
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ +G ST ++ + + + +K I A + +S
Sbjct: 242 MTDLGKFAGLGSTIEYNGKSVTLFNEENVTGAHADSKVATVITQEQAYNLMANELRAASS 301
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ G + + + T + + +
Sbjct: 302 IGADSVIGTITPKDGAGQALTSATINGYTTQNTANKITFTMTKGTASVQKDLSFNLHVGS 361
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
K + M + ++ A A + I + +A +G+I
Sbjct: 362 DADMTNKIGVTISDMSSASLGIQGLNVADATGKAATYAIDAIADAVSKVSAQRSSLGAIQ 421
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R+ + + + R+ D DMA E S Q L+ N ST +
Sbjct: 422 NRLEHTIANVDNVVENTNAAESRIRDTDMADEMVNYSKNNILAQAGQSMLAQANQSTQGV 481
Query: 447 LSLF 450
LS+
Sbjct: 482 LSIL 485
>gi|1314747|gb|AAA99807.1| flagellin [Pseudomonas aeruginosa PAO1]
Length = 488
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 63/486 (12%), Positives = 152/486 (31%), Gaps = 36/486 (7%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + +L +R+++G R++ A D+AA I+ + + L+
Sbjct: 3 LTVNTNIASLNTQRNLNASSNDLNTSLERLTTGYRINSAKDDAAGLQISNRLSNQISGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S A+ + ++ +++ I++ D ++Q E+ Q++
Sbjct: 63 VATRNANDGISLAQTAEGALQQSTNILQRIRDLALQSANGSNSDADRAALQKEVAAQQAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I+ ++F G L G+++ + + + Y +
Sbjct: 123 LTRISDTTTFGGRKLLDGSFGTTSFQVGSNAYETIDISLQNASASAIGSYQVGSNGAGTV 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+S GT + V +K+I ++ D++ I+ K A +
Sbjct: 183 ASVAGTATASGIASGTVNLVGGGQVKNIAIAAGDSAKAIAEKMDGAIPNLSARARTVFTA 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
++ + + TS S + + I + +
Sbjct: 243 DVSGVTGGSLNFDVTVGSNTVSLAGVTSTQDLADQLNSNSSKLGITASINDKGVLTITSA 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL--------------------------- 331
+ + +
Sbjct: 303 TGENVKFGAQTGTATAGQVAVKVQGSDGKFEAAAKNVVAAGTAATTTIVTGYVQLNSPTA 362
Query: 332 ------PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
+ ++ + + + + ++ +D + A +G++
Sbjct: 363 YSVSGTGTQASQVFANASAAQKSSVASVDISTADGAQNAIAVVDNALAAIDAQRADLGAV 422
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445
+R D + + + R+ D D A+E+ LS Q QQ L+ N
Sbjct: 423 QNRFKNTIDNLTNISENATNARSRIKDTDFAAETAALSKNQVLQQAGTAILAQANQLPQA 482
Query: 446 ILSLFR 451
+LSL R
Sbjct: 483 VLSLLR 488
>gi|168335508|ref|ZP_02693589.1| flagellin domain protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 412
Score = 198 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 60/450 (13%), Positives = 144/450 (32%), Gaps = 44/450 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++ + L + + +++SSGLR++ A D+AA +I++ M++ +L
Sbjct: 3 INTNLMSINSQRNLAINQSDQGSIMEKLSSGLRINRAGDDAAGLAISEKMRNQIISLKQS 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + + + +A +++ ++ + D K + E QL +++
Sbjct: 63 SSNAQDGISLIQTVEGALGEAHEMLKRMREMSIQSMNDTYTAEDRKKLDIEFKQLVTEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+R + FN + L D + S + + E ++
Sbjct: 123 SISRKTEFNDQQLLTGDPTGKGLDSVANKQSSLNKALTDYYTKLSEYQEKLGEAYAAEAG 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ LL + ++ + DA+ + + K + ++
Sbjct: 183 SVMVNTENLLHILEQELSALEIKAAGQSNKADAAAVLQSVALKQVSLEKVKASISSLNSA 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A L A +T + + S N + +
Sbjct: 243 AGLLKAEAAGLLSVAINIEASTVTDAANVLQSTMNQEVGPNEFNFQVGANNEQSIRLNIK 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + + +
Sbjct: 303 SMNMTALGFNAS-----------------------------------------KIDTQES 321
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ID ++ + ++G++ +R+ + + ++ ++ DADMA E
Sbjct: 322 AAIALNTIDAAVEIVSRQRAELGAVQNRLEHTIKNLDNTTENLQSAESQIRDADMAQEMV 381
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
L+ Q + L+ N + ++L L
Sbjct: 382 NLTRSNILSQASQSMLAQANQAPQQVLQLL 411
>gi|114562351|ref|YP_749864.1| flagellin domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114333644|gb|ABI71026.1| flagellin domain protein [Shewanella frigidimarina NCIMB 400]
Length = 481
Score = 198 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 75/478 (15%), Positives = 144/478 (30%), Gaps = 30/478 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN ++M A L N +R+SSGLR++ A D+AA I+ M S +
Sbjct: 4 SVNTNVTSMKAQGNLNKAQSNTATSMERLSSGLRINSAKDDAAGLQISNRMTSQINGIGV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ +S++ +++ +++ +D S+Q+EI L +L
Sbjct: 64 AMRNANDGISIAQTAEGALSESTNILQRMRDLSLQSANGSNSSSDRASMQTEIDALSEEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT-------------- 165
IA ++F G+ L GS + +
Sbjct: 124 TRIADTTAFGGQKLLDGSYGSQAFQVGSDANQTISISLRSSAAENIGGQKITGAGTAAGT 183
Query: 166 -------------IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYD 212
+ T + + +E
Sbjct: 184 TALTTGAPAFGAGTLTITNDATGQAGLVSAAVTDTANTYASKINALEGTTGVSARAHTEI 243
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ T + A + + A + T+
Sbjct: 244 EITSDYAAALTGGTIGSSRTGAPTTDISSVTSAQGLVDTINADSSNTGLTAKLDAESGNV 303
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
AS + + + T +S+ + + A V + T S +
Sbjct: 304 RIASLDGDNITTTQVGGATFTIDSVVNGVADGAAIDAAVAAGTTSLGAIELTSTSSFSMV 363
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ +G + ++ + +S ID I + +G++ +R+
Sbjct: 364 ESAVTGAFNGLTSSDDLVSSIDITTASGAQSAISAIDGAIATIDSQRADLGAVQNRMDFT 423
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ +++ V R+ D D A+ES LS Q Q + L+ N LSL
Sbjct: 424 ISNLSNIQNNVTDARSRIQDVDFAAESATLSKQQILSQASSAMLAQANQLPQVALSLL 481
>gi|294140193|ref|YP_003556171.1| flagellin [Shewanella violacea DSS12]
gi|293326662|dbj|BAJ01393.1| flagellin [Shewanella violacea DSS12]
Length = 482
Score = 198 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 76/478 (15%), Positives = 150/478 (31%), Gaps = 30/478 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M A L N NL+ +R+SSGLR++ A D+AA +I+ M S L
Sbjct: 4 TVNTNVTSMKAQGNLNGANSNLQTSMERLSSGLRINSAKDDAAGLAISNRMTSQINGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M ++ +++ +++ TD ++Q E++ LQ +L
Sbjct: 64 AMRNANDGISIAQTAEGAMGESTNILQRMRDLSLQAANGSNSDTDRSAMQKELSALQVEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRD----------------------- 156
IA +SF G+N L G+ + +
Sbjct: 124 TRIAETTSFGGQNLLDGSYGTQNFQVGSDANQTIAVTLKNVSATAIGSNQISGSGTKSGL 183
Query: 157 ----DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYD 212
+ T+ + T + + N + +
Sbjct: 184 AVAGTVNAMTADTVTVTGNGATDTATIGINSSAGEYAAAINGTEGTGVSATARTEAELVY 243
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ GA + A + + + + + G+ S
Sbjct: 244 TPAAGTNSVSFNLDVGGAAGTSTLAVTNATSAQDMVDQINAGSSSIGVRATLDGGNVSLV 303
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
G S T D T + +T + +
Sbjct: 304 NENGDNIGMSGYSVSGTAVTAFTIAGKDETSTATAAVTATADVIVTGNVTTNSSTNHTVT 363
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ T +I +T ++ + ++ ID+ I + +G++ +R+
Sbjct: 364 GATSAEMLGGTGSILAAISTVDISDAAGAQSALAIIDSAITGIDSNRADLGAVQNRMSFT 423
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ ++ V R+ D D A E+ ++ Q Q + L+ N LSL
Sbjct: 424 ISNLGNVQTNVADARSRIQDVDFAKETAEMTKQQILSQTSSAMLAQANQLPQVALSLL 481
>gi|126165554|gb|ABN80234.1| FliC [Pseudomonas aeruginosa]
Length = 488
Score = 198 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 64/486 (13%), Positives = 150/486 (30%), Gaps = 36/486 (7%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + +L R+++G R++ A D+AA IA + + L+
Sbjct: 3 LTVNTNIASLNTQRNLNASSNDLNTSLQRLTTGYRINSAKDDAAGLQIANRLSNQISGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S A+ + ++ +++ I++ D ++Q E+ Q++
Sbjct: 63 VATRNANDGISLAQTAEGALQQSTNILQRIRDLALQSANGSNSDADRAALQKEVAAQQAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I+ ++F G L G+++ + + + Y +
Sbjct: 123 LTRISDTTTFGGRKLLDGSFGTTSFQVGSNAYETIDISLQNASASAIGSYQVGSNGAGTV 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+S GT + V +K+I ++ D++ I+ K A +
Sbjct: 183 ASVAGTATASGIASGTVNLVGGGQVKNIAIAAGDSAKAIAEKMDGAIPNLSARARTVFTA 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
++ + + TS S + + I + +
Sbjct: 243 DVSGVTGGSLNFDVTVGSNTVSLAGVTSTQDLADQLNSNSSKLGITASINDKGVLTITSA 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL--------------------------- 331
+ + +
Sbjct: 303 TGENVKFGAQTGTATAGQVAVKVQGSDGKFEAAAKNVVAAGTAATTTIVTGYVQLNSPTA 362
Query: 332 ------PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
+ + + + + + ++ +D + A +G++
Sbjct: 363 YSVSGTGTQASQVFGNASAAQKSSVASVDISTADGAQNAIAVVDNALAAIDAQRADLGAV 422
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445
+R D + + + R+ D D A+E+ LS Q QQ L+ N
Sbjct: 423 QNRFKNTIDNLTNISENATNARSRIKDTDFAAETAALSKNQVLQQAGTAILAQANQLPQA 482
Query: 446 ILSLFR 451
+LSL R
Sbjct: 483 VLSLLR 488
>gi|157371180|ref|YP_001479169.1| flagellin domain-containing protein [Serratia proteamaculans 568]
gi|157322944|gb|ABV42041.1| flagellin domain protein [Serratia proteamaculans 568]
Length = 412
Score = 198 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 68/452 (15%), Positives = 131/452 (28%), Gaps = 46/452 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L +L +R+SSGLR++ A D+AA +I+ ++ L+
Sbjct: 4 VINTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ D + I+ S +SIQ EI++ S++
Sbjct: 64 ASRNANDGISLAQTTEGALNEVNDNLQNIRRLTVQSQNGSNSSSDLQSIQDEISERMSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FNG L D + A I N + +D + + V +
Sbjct: 124 NRISEQTDFNGVKVLSGDQKLTIQVGANDNETIQIDLKNINSKTLGLDKFSVADGVDVAK 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + +
Sbjct: 184 IGGDATTIATGKDLTITNTTNKQANGAAPASFLKDNATGDVYAVGTDGKNYKATIDKTSG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D A L A
Sbjct: 244 DITAIAAAETTGLTDTAATT---------------------------------------- 263
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
V G+T + ++ + + + +
Sbjct: 264 ---TVKEEVTATGDTAGLKSYDGGKSYLIQEGTGADAKYFKATADSAGKVTKGAEMSTTP 320
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D + +G++ +R + + + + R+ DAD A+E
Sbjct: 321 KTADPLATLDKALSQVDGLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEV 380
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S QQ L+ N ST +LSL R
Sbjct: 381 SNMSRANILQQAGTSVLAQANQSTQNVLSLLR 412
>gi|6941884|gb|AAF32261.1|AF169322_1 flagellin [Escherichia coli]
Length = 426
Score = 198 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 71/453 (15%), Positives = 139/453 (30%), Gaps = 33/453 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI +++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + + A G I D K+ + +
Sbjct: 124 DRVSGQTQFNGVNVLAKNGSLNIQVGAN--DGQTISIDLQKIDSSALGLSGFSVAGGALK 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+D + G DI ++ S + GA + ++
Sbjct: 182 LSDTVTQVGDGSAAPVKVDLDAAATDIGTALGQKVNASSLTLHNILDKDGAATENYVVSY 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A++ + T + + + + V
Sbjct: 242 GSDNYAASVADDGTVTLNKTDITYSGGDITGATKDDTLIKVAANSDGEAVGFANVQGKNY 301
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ T + T + T D
Sbjct: 302 EITDGVKTQSTAAPTDIAQTIDLDTADEFTGASTA------------------------- 336
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D I +G++ +R + + + R+ DAD A+E
Sbjct: 337 ---DPLALLDKAIAQVDTFRSSLGAVQNRPDSAVTNLNNTTTNLSEAQSRIQDADYATEV 393
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ L+ N ++LSL +G
Sbjct: 394 SNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 426
>gi|2583088|gb|AAB82613.1| FlaB [Butyrivibrio fibrisolvens]
Length = 508
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 72/507 (14%), Positives = 135/507 (26%), Gaps = 58/507 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N A ++S+ L +++SSG +++ AAD+AA SI++ M+ L
Sbjct: 2 VVQHNMQAANSSRTLNITTDAQSKSTEKLSSGYKINRAADDAAGLSISEKMRKQIRGLGQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
S G S V A+ +++ D++ + D IQ+EI QL ++
Sbjct: 62 ASTNASDGVSSVQTAEGALTEVHDMLQRMNELAVQAANGTNSESDRSDIQNEIDQLTQEI 121
Query: 120 RDIARGSSFNGENWLRTD---------------------------LGSSTASIAKSVIGS 152
IA + FN L+ D + +
Sbjct: 122 DRIASTTKFNETFLLKGDVGLRRMYINAHDAGLDGTLIQNTTRATFTMESLEAGERYTIG 181
Query: 153 FIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYD 212
+ G + L +T L I ++ + +
Sbjct: 182 GTQYTIGASTNQEVAEALHLTQYYTAGATPTAAGTWKLTAGDTISIDGKTYTINADDIGT 241
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
LA + + + A T+ K +
Sbjct: 242 DIANAKVTNGYLAKLITKGSTVKYNGNEVTRFSTSYNSSTGIDDANVTLIKATAAYKMVA 301
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ A T K + + + N VD + T +
Sbjct: 302 IXLKAASSIGATHGPASMDTAKTTSADGKVKAGDYIWEKHNIKKTVDGKEITSTTYSFSI 361
Query: 333 KEIDSGYSMVTLNITRHANTDAYN-------------------------EKLAMEEMVSF 367
+ A +
Sbjct: 362 TKGFVNIQNALTLNLHVGADAAMTNKINVTLEAMNAKSIGIAGINVSDATGKNATYAIDA 421
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
I I+ +A ++G++ +R+ + + E R+ D DMA S
Sbjct: 422 ITDAIQRVSAQRAELGAVQNRLEHSIKNLDNVVRNTEAAESRIRDTDMADTMVEYSKNNI 481
Query: 428 QQQLAVQALS---IVNNSTARILSLFR 451
QQ L+ N +T +L L +
Sbjct: 482 LQQAGQSMLAQANQANQATQGVLQLLQ 508
>gi|15596289|ref|NP_249783.1| flagellin type B [Pseudomonas aeruginosa PAO1]
gi|218892944|ref|YP_002441813.1| flagellin type B [Pseudomonas aeruginosa LESB58]
gi|12230914|sp|P72151|FLICB_PSEAE RecName: Full=B-type flagellin
gi|9947009|gb|AAG04481.1|AE004540_1 flagellin type B [Pseudomonas aeruginosa PAO1]
gi|218773172|emb|CAW28984.1| flagellin type B [Pseudomonas aeruginosa LESB58]
Length = 488
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 63/486 (12%), Positives = 150/486 (30%), Gaps = 36/486 (7%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + +L R+++G R++ A D+AA I+ + + L+
Sbjct: 3 LTVNTNIASLNTQRNLNASSNDLNTSLQRLTTGYRINSAKDDAAGLQISNRLSNQISGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S A+ + ++ +++ I++ D ++Q E+ Q++
Sbjct: 63 VATRNANDGISLAQTAEGALQQSTNILQRIRDLALQSANGSNSDADRAALQKEVAAQQAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I+ ++F G L G+++ + + + Y +
Sbjct: 123 LTRISDTTTFGGRKLLDGSFGTTSFQVGSNAYETIDISLQNASASAIGSYQVGSNGAGTV 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+S GT + V +K+I ++ D++ I+ K A +
Sbjct: 183 ASVAGTATASGIASGTVNLVGGGQVKNIAIAAGDSAKAIAEKMDGAIPNLSARARTVFTA 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
++ + + TS S + + I + +
Sbjct: 243 DVSGVTGGSLNFDVTVGSNTVSLAGVTSTQDLADQLNSNSSKLGITASINDKGVLTITSA 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL--------------------------- 331
+ + +
Sbjct: 303 TGENVKFGAQTGTATAGQVAVKVQGSDGKFEAAAKNVVAAGTAATTTIVTGYVQLNSPTA 362
Query: 332 ------PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
+ + + + + + ++ +D + A +G++
Sbjct: 363 YSVSGTGTQASQVFGNASAAQKSSVASVDISTADGAQNAIAVVDNALAAIDAQRADLGAV 422
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445
+R D + + + R+ D D A+E+ LS Q QQ L+ N
Sbjct: 423 QNRFKNTIDNLTNISENATNARSRIKDTDFAAETAALSKNQVLQQAGTAILAQANQLPQA 482
Query: 446 ILSLFR 451
+LSL R
Sbjct: 483 VLSLLR 488
>gi|116049021|ref|YP_792177.1| flagellin type B [Pseudomonas aeruginosa UCBPP-PA14]
gi|254234228|ref|ZP_04927551.1| flagellin type B [Pseudomonas aeruginosa C3719]
gi|296390542|ref|ZP_06880017.1| flagellin type B [Pseudomonas aeruginosa PAb1]
gi|115584242|gb|ABJ10257.1| flagellin type B [Pseudomonas aeruginosa UCBPP-PA14]
gi|126166159|gb|EAZ51670.1| flagellin type B [Pseudomonas aeruginosa C3719]
Length = 488
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 63/486 (12%), Positives = 150/486 (30%), Gaps = 36/486 (7%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + +L R+++G R++ A D+AA I+ + + L+
Sbjct: 3 LTVNTNIASLNTQRNLNASSNDLNTSLQRLTTGYRINSAKDDAAGLQISNRLSNQISGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S A+ + ++ +++ I++ D ++Q E+ Q++
Sbjct: 63 VATRNANDGISLAQTAEGALQQSTNILQRIRDLALQSANGSNSDADRAALQKEVAAQQAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I+ ++F G L G+++ + + + Y +
Sbjct: 123 LTRISDTTTFGGRKLLDGSFGTTSFQVGSNAYETIDISLQNASASAIGSYQVGSNGAGTV 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+S GT + V +K+I ++ D++ I+ K A +
Sbjct: 183 ASVAGTATASGIASGTVNLVGGGQVKNIAIAAGDSAKAIAEKMDGAIPNLSARARTVFTA 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
++ + + TS S + + I + +
Sbjct: 243 DVSGVTGGSLNFDVTVGSNTVSLAGVTSTQDLADQLNSNSSKLGITASINDKGVLTITSA 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL--------------------------- 331
+ + +
Sbjct: 303 TGENVKFGAQTGTATAGQVAVKVQGSDGKFEAAAKNVVAAGTAATTTVVTGYVQLNSPTA 362
Query: 332 ------PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
+ + + + + + ++ +D + A +G++
Sbjct: 363 YSVSGTGTQASQVFGNASAAQKSSVASVDISTADGAQNAIAVVDNALAAIDAQRADLGAV 422
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445
+R D + + + R+ D D A+E+ LS Q QQ L+ N
Sbjct: 423 QNRFKNTIDNLTNISENATNARSRIKDTDFAAETAALSKNQVLQQAGTAILAQANQLPQA 482
Query: 446 ILSLFR 451
+LSL R
Sbjct: 483 VLSLLR 488
>gi|33590227|gb|AAQ22675.1| flagellin [Escherichia coli]
Length = 426
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 71/453 (15%), Positives = 139/453 (30%), Gaps = 33/453 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNIDKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI +++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + + A G I D K+ + +
Sbjct: 124 DRVSGQTQFNGVNVLAKNGSLNIQVGAN--DGQTISIDLQKIDSSALGLSGFSVAGGALK 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+D + G DI ++ S + GA + ++
Sbjct: 182 LSDTVTQVGDGSAAPVKVDLDAAATDIGTALGQKVNASSLTLHNILDKDGAATENYVVSY 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A++ + T + + + + V T
Sbjct: 242 GSDNYAASVADDGTVTLNKTDITYSGGDITGATKDDTLIKVAANSDGEAVGFATVQGKNY 301
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + T + T D
Sbjct: 302 EITDGVKNQSTAAPTDIAQTIDLDTADEFTGASTA------------------------- 336
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D I +G + +R+ + + + R+ DAD A+E
Sbjct: 337 ---DPLALLDKAIAQVDTFRSSLGVVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEV 393
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ L+ N ++LSL +G
Sbjct: 394 SNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 426
>gi|229160722|ref|ZP_04288714.1| Flagellin [Bacillus cereus R309803]
gi|228622737|gb|EEK79571.1| Flagellin [Bacillus cereus R309803]
Length = 470
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 68/463 (14%), Positives = 149/463 (32%), Gaps = 15/463 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L+
Sbjct: 8 INTNINSMRTQEYMRQNQTKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVA 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G + V A + M+ +++ +++ + ++Q E +LQ Q+
Sbjct: 68 ANNTQDGMALVRTADSAMNSVSNILLRMRDIANQSANGTNTDKNQAALQKEFGELQKQID 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L S + S S + K D +++
Sbjct: 128 YIAGNTQFNDKNLLDGSNPSISIQTLDSADQSKQISIDLKSVTLESLGIKDLTVGATENT 187
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW--------- 231
+ K+I + + K +
Sbjct: 188 LAKATITAKDAFDAAKDASDAAKKEITDAAVATPAKNDAQLAKEYIEAKETLATLKPADA 247
Query: 232 ---LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
KAA V + TT + + S +
Sbjct: 248 TYAAKAAALDDATTALNNNAKVLVDGYETKLTTTKAKEAEYTAAKEQSTKSTAAEDLVTK 307
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR 348
+++ + + + + ++ + + D +
Sbjct: 308 YETAKSDALGNGIAKEYLEAKTAYEANKNDISSKSRFEAAETALNKDDVANKAAKTLVET 367
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
+ A V ID +K +G+ +R+ + +K + ++
Sbjct: 368 YEKAKAAGTTEKSLVAVDKIDEALKTIADNRATLGATLNRLDFNVNNLKSQQSSMASAAS 427
Query: 409 RLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ DADMA E + ++ + + + LS N + + L +
Sbjct: 428 QIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 470
>gi|295697516|ref|YP_003590754.1| flagellin domain protein [Bacillus tusciae DSM 2912]
gi|295413118|gb|ADG07610.1| flagellin domain protein [Bacillus tusciae DSM 2912]
Length = 494
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 74/481 (15%), Positives = 145/481 (30%), Gaps = 44/481 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM+A ++L N + +++SSG R++ A D+AA +I++ M+ L
Sbjct: 3 INHNLSAMNAWRQLSINNTETQKSLEKLSSGYRINRAGDDAAGLAISEKMRGQIRGLDMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ S + + +++ ++ ++ D K++Q E+ QL ++
Sbjct: 63 NRNAQDAISLIQTGEGALNETHSILQRMRELAVQASNDTNTDDDRKALQKEVDQLAKEIS 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIG----------------------------- 151
I+ + FN +N L + A
Sbjct: 123 RISNTTEFNTKNLLGGGFNGNFQIGANEGQTISLSINALDAKTLGVTADVASRSATVSGA 182
Query: 152 ----------SFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
G +TT+ + + +L D+S + V
Sbjct: 183 AGNVTLADLADNQFLTEGVYTLTTVANGSNFDILLKDASGNIVASAINQAAGTGGAVTLT 242
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
K +V SG IST T S + + + AP
Sbjct: 243 DAKGNNVIDIGFSGAISTASAATVTISASGADLSETANTAGLVGVQMTKADSLAPGDYTI 302
Query: 262 TSGTSGSKSPSVAASATYIRMGNSD--IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
T + + +T + + ++T+ + +T A
Sbjct: 303 TYDGTAGSEKFILKDSTGAIVATVNGTATANTIYNFTLTNGDKVSFATGATAPTDGQSST 362
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
D + + + ++ ID I + A
Sbjct: 363 FTVVKSDYTSGASTAATADANGNITKQAVVVRGIDITTQANATAAITTIDKAINTVSTAR 422
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G+I +R+ + + + + R+ D DMA E + QQ A L+
Sbjct: 423 SNLGAIQNRLEHTINNLGTAAENLTAAESRIRDVDMAQEMMNFTKNNILQQAATAMLAQA 482
Query: 440 N 440
N
Sbjct: 483 N 483
>gi|326389607|ref|ZP_08211173.1| flagellin domain protein [Thermoanaerobacter ethanolicus JW 200]
gi|325994322|gb|EGD52748.1| flagellin domain protein [Thermoanaerobacter ethanolicus JW 200]
Length = 404
Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats.
Identities = 69/436 (15%), Positives = 133/436 (30%), Gaps = 42/436 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + L N + +++SSG R++ A D+AA +I++ M++ L+
Sbjct: 3 INHNLSALNAWRALSINTANTQKSLEKLSSGYRINRAGDDAAGLAISEKMRAQIAGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ +D IQ EI QL +L
Sbjct: 63 QRNAQDGISLIQTAEGALNETQAILQRMRELAVQSANDTNTASDRAQIQKEIDQLAQELG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I R + FN + L A + ++ + I + S+
Sbjct: 123 RIGRTTEFNTQKLLDGSFKGIFQIGANENQNLSLTINDMRGYALQIVGGVTYNITGTFSA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+LKD
Sbjct: 183 AASGSLISNGTYTVSYDGTKYLLKDQ---------------------------------- 208
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A V + T+G + S S V + I N+ T
Sbjct: 209 -----AGNTVATSTDGKSYTNTAGDTISFSDPVISGQITINGTNATGVATVTNNGLDAGT 263
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
Y + + + + + + + VT + T + A
Sbjct: 264 YTYDFTNKVLKNASGEVIGKSTDGKTFVDLQGNTLFTLGAAVTADTTFTIGGIDVTTQSA 323
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ I + I + K+G+ +R+ + + + + R+ D DMA E
Sbjct: 324 ANAAITKIQSAIDKVSTERSKLGAYQNRLEHTINNLGTAAENLTAAESRIRDVDMAKEMM 383
Query: 421 RLSALQTQQQLAVQAL 436
+ Q A L
Sbjct: 384 EFTKNNILNQAATAML 399
>gi|260597239|ref|YP_003209810.1| hypothetical protein CTU_14470 [Cronobacter turicensis z3032]
gi|260216416|emb|CBA29502.1| hypothetical protein CTU_14470 [Cronobacter turicensis z3032]
Length = 489
Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats.
Identities = 69/483 (14%), Positives = 147/483 (30%), Gaps = 32/483 (6%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +I N + + + + +L +R+SSG+R++ A D+AA +IA M + A
Sbjct: 7 MATIFNNLMSGNVLTQQKKTAASLSQSIERLSSGMRINGAKDDAAGQAIANRMSATLRAN 66
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQS 117
S ++ G S A+ +S+ D+++ K +D +I +E ++++
Sbjct: 67 DVASRSMNDGISLSQTAEGALSEVTDLLTRAKELAVQAATGTLDSSDRAAISAEYSEIRE 126
Query: 118 QLRDIARGSSFNGENWLRTD----------LGSSTASIAKSVIGSFIRDDNGKVQITTID 167
Q+ I+ G++ G+ L + + V G +G V + I
Sbjct: 127 QIDAISTGTTIFGKYPLAPAASPPPPAPQLGNIPSINQRFPVPGQQYTFSSGLVPLAYIP 186
Query: 168 YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
T+ ++S + + P D + + + +
Sbjct: 187 AGATNITLTINSGWMDDDIQLFSRDGSHLVGTPVNGPTRDFTWTNNGVNSTATANTKIIS 246
Query: 228 SGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
+ + D + + S + N +
Sbjct: 247 TDNGFLPGASYSDANLTQGPATYNVSGGAVKQYNGMTITYSGDGDRYETPATGWANNGTV 306
Query: 288 W-------------------VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + + + +
Sbjct: 307 SPGNYLERLSIDKVTEDVIIMVVGNGSFYGDMTWSKLPKPTDPPDNGPVSTDTDIVMSAD 366
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
E + + T + + + + + + ID + +A G GS+ +
Sbjct: 367 YGEAVEYKTIPGTPSDTKTLGLDVTRLDNQQSASQAIDAIDHALDTVSAYRGTYGSLVNT 426
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + A R+ DAD A E++ LS Q QQ L+ N +LS
Sbjct: 427 FDSAKAGLAQKTVATTAARSRIEDADFAQEASNLSRSQILQQAGNAVLAQANQQAESVLS 486
Query: 449 LFR 451
L +
Sbjct: 487 LLK 489
>gi|313497771|gb|ADR59137.1| Flagellin [Pseudomonas putida BIRD-1]
Length = 480
Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats.
Identities = 66/478 (13%), Positives = 143/478 (29%), Gaps = 28/478 (5%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ L + R+SSGLR++ A D+AA IA + S L
Sbjct: 3 LTVNTNIASITTQGNLTKASNAQTTSMQRLSSGLRINSAKDDAAGLQIANRLTSQINGLG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G S A+ M + D++ ++ + D KS E L ++
Sbjct: 63 QAVKNANDGISIAQTAEGAMQASTDILQKMRTLALSSATGSLSADDRKSNNDEYQALTAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I+ ++F G+ L G+ + + + + + + T+
Sbjct: 123 LNRISETTTFGGQKLLDGSYGTKAIQVGANANETINLALDNVSAKSIGSQQIKSGTIAPS 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+S + V +G I +T + + A
Sbjct: 183 ASGVAAADLVVTGNGQTKTVSYDEGASAKDIAAKLNGAIGGLTASASTEVKLAVASGAAA 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ + + + + + + V++ T ++
Sbjct: 243 TPANFDLTVGGSTVSFIGVTDTASLADQLKSNAAKLGISVNYDESTKSLSVKSDTGENLK 302
Query: 299 SDPGY-------------------------TNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
T + + V + ++
Sbjct: 303 FTSQAGADAISVGARDGNGDFPGTLTTLSGTANDTSVVTGQISLDSAKGYSVADGATGTG 362
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
D + + + + ++ ID I + +G+ +R+
Sbjct: 363 ATDLFGAASKSSAKTTIADTDVTDATNAQNALAVIDKAIGSIDSVRSGLGATQNRLQTTV 422
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D ++ ++ + D D ASE+ L+ QT QQ + LS N + +L L +
Sbjct: 423 DNLQNIQKNSTAARSTVQDVDFASETAELTKQQTLQQASTAILSQANQLPSSVLKLLQ 480
>gi|167038174|ref|YP_001665752.1| flagellin domain-containing protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116583|ref|YP_004186742.1| flagellin domain-containing protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166857008|gb|ABY95416.1| flagellin domain protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319929674|gb|ADV80359.1| flagellin domain protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 404
Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats.
Identities = 65/436 (14%), Positives = 132/436 (30%), Gaps = 42/436 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + L N + +++SSG R++ A D+AA +I++ M++ L+
Sbjct: 3 INHNLSALNAWRALSINTANTQKSLEKLSSGYRINRAGDDAAGLAISEKMRAQIAGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ +D IQ EI QL +L
Sbjct: 63 QRNAQDGISLIQTAEGALNETQAILQRMRELAVQAANDTNTASDRAQIQKEIDQLAQELG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I R + FN + L A + ++ + + + +
Sbjct: 123 RIGRTTEFNTQKLLDGSFKGIFQIGANENQNLSLTINDMRGYALQVVGGVTYSITGTFTP 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+LKD
Sbjct: 183 AASGSLISDGTYTVSYDGTKYLLKDQ---------------------------------- 208
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A V + + + S + V + I N+ T +
Sbjct: 209 -----AGNIVATSTDGKSYTNAANDAISFNDPVISGQITINGTNATGVATVTNEGLDAGT 263
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
Y + + + + K + + + VT N T + A
Sbjct: 264 YTYDFTNKVLKNASGEIIGKSADDKTFVDLQGKTLFTLGAAVTANTTFTIGGIDVTTQSA 323
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ + + I + K+G+ +R+ + + + + R+ D DMA E
Sbjct: 324 ANAAITKLQSAIDTVSTERSKLGAYQNRLEHTINNLGTAAENLTAAESRIRDVDMAKEMM 383
Query: 421 RLSALQTQQQLAVQAL 436
+ Q A L
Sbjct: 384 EFTKNNILNQAATAML 399
>gi|16129870|ref|NP_416433.1| flagellar filament structural protein (flagellin) [Escherichia coli
str. K-12 substr. MG1655]
gi|89108758|ref|AP_002538.1| flagellar filament structural protein [Escherichia coli str. K-12
substr. W3110]
gi|238901132|ref|YP_002926928.1| flagellar filament structural protein (flagellin) [Escherichia coli
BW2952]
gi|253773124|ref|YP_003035955.1| flagellin [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|120312|sp|P04949|FLIC_ECOLI RecName: Full=Flagellin
gi|146312|gb|AAA23950.1| flagellin [Escherichia coli]
gi|1736591|dbj|BAA15751.1| flagellar filament structural protein [Escherichia coli str. K12
substr. W3110]
gi|1788232|gb|AAC74990.1| flagellar filament structural protein (flagellin) [Escherichia coli
str. K-12 substr. MG1655]
gi|6009847|dbj|BAA85088.1| flagellin [Escherichia coli]
gi|30059922|gb|AAP13333.1| FliC [Escherichia coli]
gi|238861106|gb|ACR63104.1| flagellar filament structural protein (flagellin) [Escherichia coli
BW2952]
gi|253324168|gb|ACT28770.1| flagellin domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|260448960|gb|ACX39382.1| flagellin domain protein [Escherichia coli DH1]
gi|315136560|dbj|BAJ43719.1| flagellin [Escherichia coli DH1]
Length = 498
Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats.
Identities = 79/495 (15%), Positives = 147/495 (29%), Gaps = 45/495 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSESDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + A I + +D + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKNGSMKIQVGANDNQTITIDLKQIDAKTLGLDGFSVKNNDTVTT 183
Query: 180 STDGTER-------------------------YGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
S T +
Sbjct: 184 SAPVTAFGATTTNNIKLTGITLSTEAATDTGGTNPASIEGVYTDNGNDYYAKITGGDNDG 243
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ T + A ANAT A + P + T+G++ + +V+
Sbjct: 244 KYYAVTVANDGTVTMATGATANATVTDANTTKATTITSGGTPVQIDNTAGSATANLGAVS 303
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
GN N +T A T Y D+
Sbjct: 304 LVKLQDSKGNDTDTYALKDTNGNLYAADVNETTGAVSVKTITYTDSSGAASSPTAVKLGG 363
Query: 335 IDSGYSMVTLNITRHANTD-----------------AYNEKLAMEEMVSFIDTQIKCATA 377
D +V ++ + + D + + +D I
Sbjct: 364 DDGKTEVVDIDGKTYDSADLNGGNLQTGLTAGGEALTAVANGKTTDPLKALDDAIASVDK 423
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G++ +R+ + + + R+ DAD A+E + +S Q QQ L+
Sbjct: 424 FRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLA 483
Query: 438 IVNNSTARILSLFRG 452
N ++LSL +G
Sbjct: 484 KANQVPQQVLSLLQG 498
>gi|317048585|ref|YP_004116233.1| flagellin domain-containing protein [Pantoea sp. At-9b]
gi|316950202|gb|ADU69677.1| flagellin domain protein [Pantoea sp. At-9b]
Length = 432
Score = 196 bits (496), Expect = 9e-48, Method: Composition-based stats.
Identities = 71/453 (15%), Positives = 134/453 (29%), Gaps = 27/453 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNINGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
+ G S + +S+ + + I+ SIQ EI ++
Sbjct: 64 AARNANDGISAAQTTEGALSEINNNLQRIRELTVQAQNGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ ++FNG N L + S + I +
Sbjct: 124 DRVSDQTTFNGVNVLSKNGSMSIQVGSNDGETIDINLEQIDSS----------------- 166
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
L K V + +AT G +
Sbjct: 167 -------TLGLSGFSVSKNSLDVTDAVTQVADTGGVMTDVDMSDVATKLGVSSGTLSLHQ 219
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + +G + + + I
Sbjct: 220 ISGTNEYVVQSGSDYYSVSVDNSGSDAGKVELNTTDVSYGDEANGIASNGAVQSGQLIKV 279
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + A V S L + D S + L+ T
Sbjct: 280 GTDSSGNATAYVTIQDKNYSVSSGLLANSDDATAATTGATSGIELSSTGGVTASTEFAGA 339
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 340 ATADPLALLDKAIAKVDTYRSSLGAVQNRLDSAITNLNNTTTNLSEAQSRIQDADYATEV 399
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ L+ N ++LSL +G
Sbjct: 400 SNMSKAQIIQQAGNSVLAKANAVPQQVLSLLQG 432
>gi|167039117|ref|YP_001662102.1| flagellin domain-containing protein [Thermoanaerobacter sp. X514]
gi|256750922|ref|ZP_05491806.1| flagellin domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300913293|ref|ZP_07130610.1| flagellin domain protein [Thermoanaerobacter sp. X561]
gi|307723693|ref|YP_003903444.1| flagellin domain-containing protein [Thermoanaerobacter sp. X513]
gi|166853357|gb|ABY91766.1| flagellin domain protein [Thermoanaerobacter sp. X514]
gi|256750257|gb|EEU63277.1| flagellin domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300889978|gb|EFK85123.1| flagellin domain protein [Thermoanaerobacter sp. X561]
gi|307580754|gb|ADN54153.1| flagellin domain protein [Thermoanaerobacter sp. X513]
Length = 404
Score = 195 bits (495), Expect = 9e-48, Method: Composition-based stats.
Identities = 65/436 (14%), Positives = 132/436 (30%), Gaps = 42/436 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + L N + +++SSG R++ A D+AA +I++ M++ L+
Sbjct: 3 INHNLSALNAWRALSINTANTQKSLEKLSSGYRINRAGDDAAGLAISEKMRAQIAGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ +D IQ EI QL +L
Sbjct: 63 QRNAQDGISLIQTAEGALNETQAILQRMRELAVQAANDTNTASDRAQIQKEIDQLAQELG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I R + FN + L A + ++ + + + +
Sbjct: 123 RIGRTTEFNTQKLLDGSFKGIFQIGANENQNLSLTINDMRGYALQVVGGVTYSITGTFTP 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+LKD
Sbjct: 183 AASGSLISNGTYTVSYDGTKYLLKDQ---------------------------------- 208
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A V + + + S + V + I N+ T +
Sbjct: 209 -----AGNIVATSTDGKSYTNAANDAISFNDPVISGQITINGTNATGVATVTNEGLDAGT 263
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
Y + + + + K + + + VT N T + A
Sbjct: 264 YTYDFTNKVLKNASGEIIGKSADDKTFVDLQGKTLFTLGAAVTANTTFTIGGIDVTTQSA 323
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ + + I + K+G+ +R+ + + + + R+ D DMA E
Sbjct: 324 ANAAITKLQSAIDTVSTERSKLGAYQNRLEHTINNLGTAAENLTAAESRIRDVDMAKEMM 383
Query: 421 RLSALQTQQQLAVQAL 436
+ Q A L
Sbjct: 384 EFTKNNILNQAATAML 399
>gi|163789658|ref|ZP_02184096.1| Flagellin-like protein [Carnobacterium sp. AT7]
gi|159875190|gb|EDP69256.1| Flagellin-like protein [Carnobacterium sp. AT7]
Length = 416
Score = 195 bits (495), Expect = 9e-48, Method: Composition-based stats.
Identities = 67/451 (14%), Positives = 143/451 (31%), Gaps = 40/451 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +AM+ L N + ++SSGLR++ A D+AA +I++ MK+ ++
Sbjct: 3 INTNTAAMNTYSNLTSANASKSSSLAKLSSGLRINKAGDDAAGLAISEKMKNQISGMTQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S G S + A+ + + +++ +++ D +IQ+E+T L ++
Sbjct: 63 SRNAQDGISLIQTAEGALGETHSILNRMRDLTVQSANGTNTADDKTAIQAELTSLTKEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + + +ST+ + +
Sbjct: 123 RIAGDTEFNTKGLMNGSEITSTSIGGNFTPAGAALTAPATNDNKLLVLAIKATNANTTLK 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
DGT+ G + K ++ K I D + +S K + +KA
Sbjct: 183 ADGTDTAGDMHTALKDLTPEKLDKIIAKYNTDKAADVSADKKLADAFDTSTVKADFDAKA 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
G+ + + + ++ + + S
Sbjct: 243 SKYGVTVAAGTNATDAEITTLNNAIAKAGKSELSVNDLGESRDTKFNFQIGANAGEKISV 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
S+ N
Sbjct: 303 EIKNMSSKGLGVNNIDVT-------------------------------------ATNAN 325
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++++ +D I ++ +G++ +R+ + ++ + + R+ D DMA E
Sbjct: 326 TDDILGKLDKAIGSVSSQRADLGAVQNRLDHTVSNLATTKENLSEANSRITDVDMAEEMM 385
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q + L+ N +LSL +
Sbjct: 386 SFTKSNILSQASTSMLAQANQMPQSVLSLLQ 416
>gi|126165552|gb|ABN80233.1| FliC [Pseudomonas aeruginosa]
Length = 488
Score = 195 bits (495), Expect = 9e-48, Method: Composition-based stats.
Identities = 62/486 (12%), Positives = 150/486 (30%), Gaps = 36/486 (7%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + + + +L R+++G R++ A D+AA I+ + + L+
Sbjct: 3 LTVNTNIASLNTQRNVNASSNDLNTSLQRLTTGYRINSAKDDAAGLQISNRLSNQISGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S A+ + ++ +++ I++ D ++Q E+ Q++
Sbjct: 63 VATRNANDGISLAQTAEGALQQSTNILQRIRDLALQSANGSNSDADRAALQKEVAAQQAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I+ ++F G L G+++ + + + Y +
Sbjct: 123 LTRISDTTTFGGRKLLDGSFGTTSFQVGSNAYETIDISLQNASASAIGSYQVGSNGAGTV 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+S GT + V +K+I ++ D++ I+ K A +
Sbjct: 183 ASVAGTATASGIASGTVNLVGGGQVKNIAIAAGDSAKAIAEKMDGAIPNLSARARTVFTA 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
++ + + TS S + + I + +
Sbjct: 243 DVSGVTGGSLNFDVTVGSNTVSLAGVTSTQDLADQLNSNSSKLGITASINDKGVLTITSA 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL--------------------------- 331
+ + +
Sbjct: 303 TGENVKFGAQTGTATAGQVAVKVQGSDGKFEAAAKNVVAAGTAATTTVVTGYVQLNSPTA 362
Query: 332 ------PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
+ + + + + + ++ +D + A +G++
Sbjct: 363 YSVSGTGTQASQVFGNASAAQKSSVASVDISTADGAQNAIAVVDNALAAIDAQRADLGAV 422
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445
+R D + + + R+ D D A+E+ LS Q QQ L+ N
Sbjct: 423 QNRFKNTIDNLTNISENATNARSRIKDTDFAAETAALSKNQVLQQAGTAILAQANQLPQA 482
Query: 446 ILSLFR 451
+LSL R
Sbjct: 483 VLSLLR 488
>gi|52143698|ref|YP_083130.1| flagellin [Bacillus cereus E33L]
gi|51977167|gb|AAU18717.1| flagellin [Bacillus cereus E33L]
Length = 460
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 67/458 (14%), Positives = 154/458 (33%), Gaps = 10/458 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 3 INTNINSMRTQEYMRQNQAKMSTAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + M+ +++ +++ + ++ E L+ Q+
Sbjct: 63 ANNTQDGISLIRTADSAMNSVSNILLRMRDLANQSANGTNTDKNQGALDKEFAALKEQID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASI----AKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
I++ + FN + L + K D + + + +
Sbjct: 123 YISKNTEFNDKKLLDGSNKAIAIQTLDSDDKGKQIDISLSDTSTTALKINNLSIAANGLG 182
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+ S + N + ++ + S + + A
Sbjct: 183 IGSGKELVGVADNTIANASAEALKKLDGTTGDTDVKRSNAVKAFTDQYKDLKVAMNAKDV 242
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
T D A L A A G + + + +AT SD+ +TT+
Sbjct: 243 ETIDAAIKKFEGANTLENAQAIGAAFEGAAKATLTTDINNATLTSKALSDLDTDSTTETR 302
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRH---ANTD 353
+ + + G+ + T+ + R + +
Sbjct: 303 KAAMKDFVAAFDKVKGSMNSSDVTKISDAIDRFSKTDDSGNTLEAARAIGDAFKAATTNG 362
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ + ID ++ + +G+ +R+ + +K ++ ++ DA
Sbjct: 363 KTSTATDANSAIKAIDEALETIASNRATLGATLNRLDFNVNNLKNQASSMASAASQVEDA 422
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DMA E + ++ + + + LS N + + L +
Sbjct: 423 DMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 460
>gi|41651|emb|CAA35488.1| hsg48 [Escherichia coli]
Length = 498
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 78/495 (15%), Positives = 146/495 (29%), Gaps = 45/495 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSESDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + A I + +D + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKNGSMKIQVGANDNQTITIDLKQIDAKTLGLDGFSVKNNDTVTT 183
Query: 180 STDGTER-------------------------YGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
S T +
Sbjct: 184 SAPVTAFGATTTNNIKLTGITLSTEAATDTGGTNPASIEGVYTDNGNDYYAKITGGDNDG 243
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ T + A ANAT A + + T+G++ + +V+
Sbjct: 244 KYYAVTVANDGTVTMATGATANATVTDANTTKATTITSGGTLVQIDNTAGSATANLGAVS 303
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
GN N +T A T Y D+
Sbjct: 304 LVKLQDSKGNDTDTYALKDTNGNLYAADVNETTGAVSVKTITYTDSSGAASSPTAVKLGG 363
Query: 335 IDSGYSMVTLNITRHANTD-----------------AYNEKLAMEEMVSFIDTQIKCATA 377
D +V ++ + + D + + +D I
Sbjct: 364 DDGKTEVVDIDGKTYDSADLNGGNLQTGLTAGGEALTAVANGKTTDPLKALDDAIASVDK 423
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G++ +R+ + + + R+ DAD A+E + +S Q QQ L+
Sbjct: 424 FRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLA 483
Query: 438 IVNNSTARILSLFRG 452
N ++LSL +G
Sbjct: 484 KANQVPQQVLSLLQG 498
>gi|6941886|gb|AAF32262.1|AF169323_1 flagellin [Escherichia coli]
gi|30059916|gb|AAP13330.1| FliC [Escherichia coli]
Length = 501
Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 76/498 (15%), Positives = 140/498 (28%), Gaps = 48/498 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSESDLSSIQDEIKSRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF-------------IRDDNGKVQITTI 166
++ + FNG N L D A D +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGTMKIQVGANDGQTISIDLKKIDSSTLGLTGFDVSTKANIST 183
Query: 167 DYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
T S + + + D Y A T +
Sbjct: 184 TAVTGAATTTYADSAVAIDIGTDISGIAADAALGTINFDNTTGKYYAQITSAANPGLDGA 243
Query: 227 TSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD 286
A + A P A + T+ T+ + V A+ T + +D
Sbjct: 244 YEIHVNDADGSFTVAASDKQAGAAPGTALTSGKVQTATTTPGTAVDVTAAKTALAAAGAD 303
Query: 287 I--------------------------------WVRATTKNSITSDPGYTNSTVAKVGNT 314
T A +T
Sbjct: 304 TSGLKLVQLSNTDSAGKVTNVGYGLQNDSGTIFATDYDGTTVTTPGAETVTYKDASGNST 363
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
V + + + + + + + ++ +D I
Sbjct: 364 TAAVTLGGSDGKTNLVTAADGKTYGATALNGADLSDPNNTVKSVADNAKPLAALDDAIAM 423
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 424 VDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNS 483
Query: 435 ALSIVNNSTARILSLFRG 452
LS N ++LSL +G
Sbjct: 484 VLSKANQVPQQVLSLLQG 501
>gi|167034934|ref|YP_001670165.1| flagellin domain-containing protein [Pseudomonas putida GB-1]
gi|166861422|gb|ABY99829.1| flagellin domain protein [Pseudomonas putida GB-1]
Length = 483
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 65/481 (13%), Positives = 143/481 (29%), Gaps = 31/481 (6%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ L + R+SSGLR++ A D+AA I+ + S L
Sbjct: 3 LTVNTNIASITTQGNLTKASTAQTTSMQRLSSGLRINSAKDDAAGLQISNRLTSQINGLG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G S A+ M + D++ ++ + D KS E L ++
Sbjct: 63 QAVKNANDGISIAQTAEGAMQASTDILQKMRTLALSSATGSLSADDRKSNNDEYQALTAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I++ ++F G+ L G+ + + + + + +
Sbjct: 123 LTRISQTTTFGGQKLLDGSYGTKAIQVGANANETINLTLDNVAANNIGSQQVKSVAITPS 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ + V + +G I +T +
Sbjct: 183 ATGVDAGTVTVTGNGQTKDVTVTAGDSAKTIAANLNGAIGGLTATASTEVQFSVDKTAIA 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
A A + + + + + T+ + +A N D +
Sbjct: 243 GVTAGPAANFELTVGSQKVSFVGVTDTASLADQLKSNAAKLGISVNYDESNGGSLSVKSD 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP-------------------------- 332
+ V+ + +
Sbjct: 303 TGENLVFGAGDAAAQAGIKVNAKDGNGEYAASGTALTAADLYVTGAISLDSAKGYSLTGG 362
Query: 333 --KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
++ S ++ + + ++ ID I + +G+ +R+
Sbjct: 363 GVTKLFSAAGTAATSVKTTIADTDVTDATKAQNALAVIDKAIGSIDSVRSGLGATQNRLQ 422
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D ++ ++ + D D ASE+ L+ QT QQ + LS N + +L L
Sbjct: 423 TTVDNLQNIQKNSTAARSTVQDVDFASETAELTKQQTLQQASTAILSQANQLPSSVLKLL 482
Query: 451 R 451
+
Sbjct: 483 Q 483
>gi|302671557|ref|YP_003831517.1| flagellin FliC4 [Butyrivibrio proteoclasticus B316]
gi|302396030|gb|ADL34935.1| flagellin FliC4 [Butyrivibrio proteoclasticus B316]
Length = 406
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 65/452 (14%), Positives = 132/452 (29%), Gaps = 50/452 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I AM+A++ L + +++SSG R++ AAD+AA SI++ M+ L+
Sbjct: 2 VIQHCMEAMNANRMLNVNVKDQAKASEKLSSGYRINRAADDAAGLSISEKMRRQVRGLTQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQL 119
++ G S V IA+ +++ D++ + D IQSEI LQS++
Sbjct: 62 AAENAQDGISLVQIAEGALNEVHDMLQRMNELCVKSANDTLTYEDKTYIQSEIEALQSEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++FN L + IR + + I +
Sbjct: 122 DRTGGVTTFNEIKILNG------------IRQEMIRAASPTLAYNGISGGTLTQATSNAL 169
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ + ++ A I + +
Sbjct: 170 ASYSIRPLSDGTILTTGNGSEKTYYSVNGPNPPAHQVIYDDDGNIIDEIIPGSSRYPYSI 229
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ I L A + T + + G + ++ ++ T
Sbjct: 230 SKESVYRDIASRLSKANTTDDYTVSITYQIAGPDEGKFNMEFFGKLQLKLQVGSEAGQTM 289
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
D + ++ A +
Sbjct: 290 D-----------------------------------IKISPVNASSLGLWNVNVATRDNS 314
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + I+ + +G+ +R+ + + + R+ D DMA +
Sbjct: 315 GPLSGIETVKNAIEITSRERSNLGAYQNRLEHTIRNLDNVVENTTGAESRIRDTDMAHQM 374
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q LS N + +LSL +
Sbjct: 375 VNYSNRNILIQAGQTILSQANQTNQGVLSLLQ 406
>gi|322833178|ref|YP_004213205.1| flagellin domain protein [Rahnella sp. Y9602]
gi|321168379|gb|ADW74078.1| flagellin domain protein [Rahnella sp. Y9602]
Length = 426
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 79/452 (17%), Positives = 132/452 (29%), Gaps = 32/452 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNTLSLMTQNNLNKSQSALSTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +S+ + + I+ +D SIQ EIT S++
Sbjct: 64 ASRNANDGISVAQTTEGSLSEINNNLQRIRELSVQAANGTNSDSDLTSIQDEITSRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L ++ A I ++ + L S
Sbjct: 124 DRVSGQTQFNGVNVLASNQTMKIQVGANDGQTIDIDLQKIDSTTLGLNGFSVASNALKTS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+N + L + K L A A
Sbjct: 184 DAITQVGASGSLKNVDLSAAATSLG------------LDASKLSLKNVQTAAGAATATYV 231
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A A T+ S + + + + T +
Sbjct: 232 VSDGTSNYAASVDDATGAVTLNTTDVSYTDTDNGVTAGTQTGKLVKVGADATGAAVGYVT 291
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G T A T + + Y +
Sbjct: 292 VQGKDYKTAAGAIVDGGATGTANVASTIGDIASAANTNAY-----------------TGV 334
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + + ID I +G++ +R + + R+ DAD A+E
Sbjct: 335 ATSDPLKAIDAAIAKVDTFRSSLGAVQNRFDSAITNLDNTTTNLSSAQSRIQDADYATEV 394
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ LS N +LSL +
Sbjct: 395 SAMSKAQILQQAGTSVLSKANQVPQSVLSLLQ 426
>gi|260222447|emb|CBA32020.1| B-type flagellin [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 484
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 75/482 (15%), Positives = 147/482 (30%), Gaps = 32/482 (6%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I TN ++++A + L +L R+SSGLR++ A D+AA +I+ M S L+
Sbjct: 3 STINTNINSLTAQRNLSMSQSSLSTSMQRLSSGLRINSAKDDAAGLAISDRMTSQIRGLT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ S A+ + + I+ +D ++IQ+E+TQL S+
Sbjct: 63 QAARNSNDAISLTQTAEGALGSISSNLQRIRELAVQSANGTNSASDREAIQNEVTQLTSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ +A + FNG N L L + + + + L TV
Sbjct: 123 INRVATTTQFNGLNLLDGTLTGTQFQVGANANQIITVGVGSAKAADLGNNTLASSTVAGA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
S ++V+V +++ +I+ K T+G A
Sbjct: 183 ISDAALAAVNNTAAQVLTLNGNGSTATVNVAVNESAKSIAGKINTNTATTGITATAKTTA 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP--------------------------- 271
I L A + T +
Sbjct: 243 TISGVTAGAISFTLQGANTTAVAITATVSDATDLSAIAKAINAQSSLTNITATSDKAGKL 302
Query: 272 --SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ +T G + + T T
Sbjct: 303 VLTDLDGNDIKIDSTQAAAGDGIGTALVTGSTGAATAALGTATATIGGSLTFDADSGFSI 362
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRI 389
+ + + + + + +D + + +G++ +R
Sbjct: 363 ATDTGTTLMGAASNGSALSTVAALSVSTVDGANKALKVVDAALAQVSDQRAALGAVQNRF 422
Query: 390 HLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
++ + + R+ DAD A+E+ LS Q QQ ++ N +L+L
Sbjct: 423 ESTVTNLQTSSENLSASRSRIQDADFAAETANLSRSQILQQAGTAMVAQANQLPQGVLAL 482
Query: 450 FR 451
R
Sbjct: 483 LR 484
>gi|229029440|ref|ZP_04185523.1| Flagellin [Bacillus cereus AH1271]
gi|228731899|gb|EEL82798.1| Flagellin [Bacillus cereus AH1271]
Length = 437
Score = 194 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 63/444 (14%), Positives = 140/444 (31%), Gaps = 10/444 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R+++A+D+AA +IA M++ L+ ++ G
Sbjct: 1 MRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVAANNTQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSS 127
+ + A + M+ +++ +++ + ++Q E +LQ Q+ I+ +
Sbjct: 61 MALIRTADSAMNSVSNILLRMRDLANQSANGTNTDKNQAALQKEFGELQKQIDYISSNTQ 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
FN +N L + S GS T + +
Sbjct: 121 FNDKNLLDGSNKTINIQTLDSEDGSRQIGIELGSASTKALGIDTLNIGSSKITEATKDHA 180
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ + + S G IS + + A + AK
Sbjct: 181 TDTIGGLTSGSDDKAVALAKKSFDQIKGAISNADAQALAQAFENYDNAASGEKGAKAAEI 240
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
V + S + + + G R +
Sbjct: 241 KNVYDTITNFSMAKVSEDVYTDAKTAIKGLKATSTGKEVAAAREHFDKIKDYLSKPNRTA 300
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
+ DT + T ++ + + + + +
Sbjct: 301 LENAFKAFDGTDTTAGTSGNQGSDIASKFPAVDLSVAKSS-------DDSAANPLQAIRA 353
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
ID +K +G+ +R+ + +K + ++ ++ DADMA E + ++ +
Sbjct: 354 IDAALKTIADNRATLGATLNRLDFNVNNLKSQQSSMASAASQVEDADMAKEMSEMTKFKI 413
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
+ + LS N + + L +
Sbjct: 414 LNEAGISMLSQANQTPQMVSKLLQ 437
>gi|313904254|ref|ZP_07837632.1| flagellin domain protein [Eubacterium cellulosolvens 6]
gi|313470804|gb|EFR66128.1| flagellin domain protein [Eubacterium cellulosolvens 6]
Length = 409
Score = 194 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 63/452 (13%), Positives = 135/452 (29%), Gaps = 47/452 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N A +A + L L +++SSG R++ AAD+AA +I++ M+S L
Sbjct: 2 VIQHNIPATNAYRNLTSNRSGLSKNLEKLSSGFRINRAADDAAGLAISEAMRSKINGLDQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
+ + + +++ ++ + T + SIQ E+ +L +++
Sbjct: 62 ATANANDAIGLIQTEEGALTETHSMLQRMTTLATQAANGTYNSTSRASIQKEMDELGNEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + +NG L D + A + + + L
Sbjct: 122 DRIANNTDYNGIKPLAADSNKGNGTDAVNNDSKLNMTMQIGPTKGEVLDLKGQDMTLKGI 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
D + G+ + + V + + D + + L + A+
Sbjct: 182 FNDLDKVSGVSATSTGVTVPTTAGSQLVKLISDKKVDKTQAEKDLTNAVRDAMNRADIKG 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ I A T + + ++
Sbjct: 242 AASVSITLSSTGTIAYNGQEKITGSKAIAVYNAL-------------------------- 275
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
D +K ++ + +
Sbjct: 276 ------------------ADAYDALDGVQKSKGDTANALTDGKEYIQITASGAANDDVTA 317
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+V I + I ++ ++G+ +R+ + +++ + R+ D DMA E
Sbjct: 318 NANRVVKNIQSAIDHVSSYRAELGAKQNRLEHTINNLQVTSENTTAAESRIRDTDMAKEM 377
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q A L+ N S +LSL +
Sbjct: 378 AAYTKNNILSQAAQSMLAQANQSGQGVLSLLQ 409
>gi|168335503|ref|ZP_02693584.1| flagellin domain protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 411
Score = 194 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 52/451 (11%), Positives = 135/451 (29%), Gaps = 45/451 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A+++ + + + +++SSGLR++ A D+AA +I++ M++
Sbjct: 3 INTNLMAINSQRSMGVKQEEKSELAEKLSSGLRINRAGDDAAGLAISEKMRNQIKGFQQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + + +S+ ++++ ++ + D K + E QL +
Sbjct: 63 SRNAEDGISLIQTTEGALSEIYEMLTRVREMSIQSINDTYTNEDRKKLDIEAQQLILSID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
D+A + FN + L D + + + L + + ++
Sbjct: 123 DLANKAEFNEQKILTGDPTGKGLASVAAQKQNLAAALKTYYAHIGAHDSLLGMSYSVTTA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
++ + S F+++ +
Sbjct: 183 LPLQTALQSAIDLEYKIEALEIQAQGETSDIKQDVLTKISHFRVSFEQLYSSISQYEAQA 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ A I A + + S + ++
Sbjct: 243 NSLRSAAISFATMAVSVEADMVAFVSKTLQATMNEKV----------------------- 279
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + + + + +
Sbjct: 280 -------------------GPNEFTFQVGPNNDQEIHLNIKAMNSTALGLDATKLDTPES 320
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ++ +D ++ + +G++ +R+ + + + ++ ++ DADMA E
Sbjct: 321 AKLALTSVDAAVEIISRQKALLGAVQNRLEHTVKSVNISAENLQAAESQIRDADMAQEMM 380
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q + L N ++L L +
Sbjct: 381 NLTKTNIISQASQSILVQANQVPQQVLQLLQ 411
>gi|229591862|ref|YP_002873981.1| flagellin [Pseudomonas fluorescens SBW25]
gi|229363728|emb|CAY51128.1| flagellin [Pseudomonas fluorescens SBW25]
Length = 485
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 66/483 (13%), Positives = 137/483 (28%), Gaps = 33/483 (6%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ L L R+SSGLR++ A D+AA IA + S L
Sbjct: 3 LTVNTNIASITTQSNLNKAGGALATSMQRLSSGLRINSAKDDAAGLQIANRLTSQINGLG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQ 118
+ G S A+ M + D++ ++ + D KS E L S+
Sbjct: 63 QAVKNVNDGISIAQTAEGAMQASTDILQKMRTLALSSATGSLSPDDRKSNNDEYQALTSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I++ ++F G+ L G+ + + + + V
Sbjct: 123 LTRISQTTTFGGQKLLDGSYGTKAIQVGANANETINLSLENVAANNIGSQQIKSVAVTPS 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ + V +G + +T +
Sbjct: 183 ATGLAAGSIAITGNGQSSTVAVNAGDSAKTIAASLNGAVGGLSATASTEVEFSVDETKTK 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSG------------------------------TSGS 268
A TS +
Sbjct: 243 GATGVPANFSIGVGSATVKFVGVTSTADLADQLKSNAAKLGISVNYDEAKGTLQVKSDSG 302
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
++ S + A + + + + + V + +L +
Sbjct: 303 ENLSFTSDAVGADAVGIKVKDGSGAYAAAATPLAAAAAGVIVATGQISLDSAKGYSLANG 362
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
D + + + + ++ +D I +G+ +R
Sbjct: 363 ATGTSVTDLFGAAQISSKKTSVAQTDVTDANNAQNAIAVLDKAIGTIDGVRSGLGATQNR 422
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ D ++ ++ + D D ASE+ L+ QT Q + LS N + +L
Sbjct: 423 LTTTADNLQNIQKNSTAARSTVQDVDFASETAELTKQQTLQSASTAILSQANQLPSAVLK 482
Query: 449 LFR 451
L +
Sbjct: 483 LLQ 485
>gi|218708812|ref|YP_002416433.1| flagellin [Vibrio splendidus LGP32]
gi|218321831|emb|CAV17803.1| Flagellin core protein A [Vibrio splendidus LGP32]
Length = 399
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 59/449 (13%), Positives = 130/449 (28%), Gaps = 53/449 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + L +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 NVSTNVSAMTAQRYLNKSSNELATSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
G S A+ M+++ +++ +++
Sbjct: 64 AMRNANDGISIAQTAEGAMNESTNILQRMRDLAIQ------------------------- 98
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ T S A+ + + LL+ S
Sbjct: 99 ---------------SSNGTNSPAERQALNEETMALQDELNRIAETTAFGGRRLLNGSFG 143
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + + ++ D + + K K +A
Sbjct: 144 EASFQIGSNSGEAMIMALTSIRADDFRMGGTTFDTENAKDKSWEVPLEAKDLKFEFKTKA 203
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
I + A + +G A+ R+ + I+
Sbjct: 204 GEEVAIDISAKAGDDIEELATYINGQSDLINASVTDEGRLQVFVAEPDLDGEMRISGGLA 263
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
T + + T N +
Sbjct: 264 SELGFKNDAPEGQETTTTADGKVVPAPAVG-------------RTTLVQDIDLNTVAGSQ 310
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+S ID+ ++ + +G+ +R+ + + +++ V+ R+ D D A E+T++
Sbjct: 311 NAISVIDSAMQYVDSQRADLGAKQNRLSHSINNLANVQENVDASNSRIKDTDFAKETTQM 370
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q QQ L+ +SL +
Sbjct: 371 TKAQILQQAGTSILAQAKQLPNSAISLLQ 399
>gi|291526233|emb|CBK91820.1| Flagellin and related hook-associated proteins [Eubacterium rectale
DSM 17629]
Length = 476
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 71/472 (15%), Positives = 145/472 (30%), Gaps = 25/472 (5%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ A+++L L R+SSG +++ A DN A +I+ MK+ AL
Sbjct: 3 INRNMSAVRANKQLLGTENRLSKSMKRLSSGYKINSAEDNPAGMAISNKMKAQIEALDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ + IA + + ++ I+ D K++QSEI +L ++
Sbjct: 63 KSNSSDAQNVMKIADGALGEVSSMLQRIRELAVQGASDTYSENDKKALQSEIDELTKEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTA-------SIAKSVIGSFIRDDNGKVQITTIDYYLDPE 173
I+ + +N ++ L + V R + +
Sbjct: 123 RISGDTEYNTKSLLDGSSDTRVYVRQKDANGNMTQVNSYITRINFSDNVASDKYELTVNS 182
Query: 174 TVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233
+ + + + I +K T
Sbjct: 183 LATQATGSLASATKPDAEGTISINGVSVAVKADMTQDEYIQALQKAATTAGTTMQVNGDS 242
Query: 234 AANATFDQAKGI---------------ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
+ + + A + ++G + S
Sbjct: 243 ISFLSNEYGSDSIVNISLSSSLKALAGAGYENADDGSGNMQLKSNGKDAVVTGGENLSDK 302
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
IR + ++V + S+ A N + +
Sbjct: 303 TIRADGNRVYVVGNSGFSMDFLLSSDMDMTAGSSNLQIDISDIGNMAVQIGANEGQEMKI 362
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ T + +T K ++ +S +D I+ + +IG+ +R+ E +
Sbjct: 363 RIPEVSSQTLYLDTVDVTVKGGADKAMSTLDEAIEYVSGVRSRIGAFQNRLESAESSLSE 422
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + ++D DMA+E T +A Q + LS N+ ++LSL
Sbjct: 423 TSENMTGAYSNIMDTDMATEMTEYAAQNILDQAGISVLSQANDLPQQVLSLL 474
>gi|196045108|ref|ZP_03112341.1| flagellin [Bacillus cereus 03BB108]
gi|196024110|gb|EDX62784.1| flagellin [Bacillus cereus 03BB108]
Length = 457
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 63/455 (13%), Positives = 146/455 (32%), Gaps = 7/455 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + ++ +++ +++ + K++ E + L+ Q+
Sbjct: 63 ANNTQDGMSLIRTADSALNSVSNILLRMRDIANQSANGTNTTDNQKALDKEFSALKEQID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASI----AKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
I++ + FN + L + + + D + + +
Sbjct: 123 YISKNTEFNDKKLLNGQNATIAIQTLDSADTNKQININLADTSTSALNINNLSIAASGSS 182
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+ + + V+ + +G + K G + A
Sbjct: 183 APLVGADAGKITTANPLAQALVDFDGTATGKDANERTTGVNNFKAAFDDIKGGLSTEDAQ 242
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
+D A S T + + + D T
Sbjct: 243 KIYDAIDKFNGSKSLADAQEIGTLYQSMTLAKDTEVTTTKNLATTLTSLDGITTGKTAGD 302
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
T+ + K+ D + T + + I A
Sbjct: 303 RTTAVTNFETEFNKIKGGMSKEDADKITAAIQNFKKADGTGNTLENAKEIGNLFTQAAAG 362
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ ID ++ + +G+ +R+ + +K ++ ++ DADMA
Sbjct: 363 TSYNASNAIKSIDKALETIASNRATLGATLNRLDFNVNNLKSQSASMASAASQIEDADMA 422
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + ++ + + + LS N + + L +
Sbjct: 423 KEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 457
>gi|270262373|ref|ZP_06190645.1| flagellin domain-containing protein [Serratia odorifera 4Rx13]
gi|270044249|gb|EFA17341.1| flagellin domain-containing protein [Serratia odorifera 4Rx13]
Length = 413
Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats.
Identities = 69/452 (15%), Positives = 135/452 (29%), Gaps = 45/452 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L L +R+SSGLR++ A D+AA +I+ ++ L+
Sbjct: 4 VINTNSLSLMAQNNLNKSQSTLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ D + I+ S +SIQ EITQ S++
Sbjct: 64 ASRNANDGISLAQTTEGALNEVNDNLQNIRRLTVQSQNGSNSSSDLQSIQDEITQRMSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FNG L D + A I N +D + ++
Sbjct: 124 NRISAQTDFNGVKVLSGDQKLTIQVGANDNETIDIDLKNINSSTLGLDKFSVATSIDPTK 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + +
Sbjct: 184 VGGAATTVPNGKDIAITNTTNKQANGAAPASFIKDDATGDVYAVGTDGKNYKATIDKTSG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D AT L + A + + + + +
Sbjct: 244 DITAIAATDTTGLASTSATTTVKQEVTATGADAANLKSY--------------------- 282
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+S ++ + + + + +
Sbjct: 283 ---------------------DSGKSYVIQEGTGANAKYFKANVDSAGKVSKGAEMSTTP 321
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
E+ +S +D + + +G++ +R + + + + R+ DAD A+E
Sbjct: 322 TTEDPLSVLDKALSQVDSLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEV 381
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S QQ L+ N ST +L+L R
Sbjct: 382 SNMSRANILQQAGTSVLAQANQSTQNVLTLLR 413
>gi|405547|gb|AAA62844.1| flagellin [Pseudomonas putida]
Length = 479
Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats.
Identities = 63/478 (13%), Positives = 137/478 (28%), Gaps = 29/478 (6%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ L + R+SSGLR++ A D+AA IA + S L
Sbjct: 3 LTVNTNIASITTQGNLTKASNAQTTSMQRLSSGLRINSAKDDAAGLQIANRLTSQINGLG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI---TAGVERGTDSKSIQSEITQLQSQ 118
G S A+ M + D++ ++ G D KS E L ++
Sbjct: 63 QAVKNANDGISIAQTAEGAMQASTDILQKMRTLALCSATGSLSNADRKSNNDEYQALTAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I + ++F + + S + + +
Sbjct: 123 LNRICQTTTFGARSCWTV-RTAPRPSRSAPTPTKPSTWRWTTFRPRASARSRSSRALSRL 181
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + V +G+I +T + + A
Sbjct: 182 AQRVAAADLVVTGNGQSKTVSYDAGSSAKDIAAKLNGSIGGLTASASTEVKLAVASGAAA 241
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ + + + + + + V++ T ++
Sbjct: 242 TPANFDLTVGGTTVSFIGVTDTASLADQLKSNAAKLGISVNYDESTKSLSVKSDTGENLA 301
Query: 299 SDPG-------------------------YTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
T + + V + ++ +
Sbjct: 302 FTSKAGADAISVGARDGNGDFPGTLTTLSATVNDKSTVTGQISLDSAKGYSVANGATGTG 361
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
D + + E + + ++ ID I + +G+ +R+
Sbjct: 362 ATDLFGAASKSSAKTTIADTDVTEAVNAQNALAVIDKAIGSIDSVRSGLGATQNRLQTTV 421
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D ++ ++ + D D ASE+ L+ QT QQ + L N + +L L +
Sbjct: 422 DNLQNIQKNSTAARSTVQDVDFASETAELTKQQTLQQASTAILLQANQLPSSVLKLLQ 479
>gi|292669876|ref|ZP_06603302.1| flagellin [Selenomonas noxia ATCC 43541]
gi|292648673|gb|EFF66645.1| flagellin [Selenomonas noxia ATCC 43541]
Length = 461
Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats.
Identities = 67/458 (14%), Positives = 142/458 (31%), Gaps = 9/458 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N A++ L L +VSSG++++ A D+A+ +I++ M+ AL
Sbjct: 4 VVKNNMQAVNTLNTLNKNQSELSKSLQKVSSGMKINSAGDDASGMAISERMRVQVRALDQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
+D GS+ + A+ + I+++ T+K K D + IQ E+ +L Q+
Sbjct: 64 DNDNTMNGSALLRTAEGAVQSTIEILKTLKEKAINAANDTNTDEDRRLIQKEVDRLIDQI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
D A + + + SF + D
Sbjct: 124 DDNALTTYNGKYLVDGSKNSLVAGNNGLGTATSFTNMSLATTTDPSDFLTELKRRDGNDV 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ + + + D + + I T + AW+
Sbjct: 184 GIHPSDTITASWVMNGVTYTGSISPIGDTTTLSDAIDIITNSHAGYFGNDAWVGIDAYGK 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + A+ + + + D + + +
Sbjct: 244 RVYTPDNKPGITIRASHEGADHQIAGITFRVTDSRGNMRNEVNAVLDDFRETVRAQNPSP 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN------TD 353
D T + T+ + P + + +
Sbjct: 304 DNSLVLQTGTRANQAIRAGFTDMRSAALGLQAPNGQGWDRTAIIHPSGHRIDVVGAGPKV 363
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ A ++ + AT A +IG++ +R+ + + V+ + DA
Sbjct: 364 QVTTREAANAAINVFQNALIKATDQAIEIGALQNRLGYTSSNLTTASENVQASESTIRDA 423
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DMA E T + Q A L+ N +++ +LSL +
Sbjct: 424 DMAKEMTAYTKHNVLTQSAQAMLAQANQNSSAVLSLLQ 461
>gi|30059910|gb|AAP13327.1| FliC [Escherichia coli]
Length = 432
Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats.
Identities = 75/453 (16%), Positives = 143/453 (31%), Gaps = 27/453 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S A+ +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTAEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + + A I+ +D T+ L
Sbjct: 124 DRVSGQTQFNGVNVLAKNGSMAIQVGAN-----------DGQTISIDLQKIDSSTLGLSG 172
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ L D I K++D+S ++ L +
Sbjct: 173 FSVSQNSLKLSDSITTIGNTTAASKNVDLSAVATKLGVNASTLSLHEVQDSAGDGTGTFV 232
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A+ A T+ + + + I
Sbjct: 233 VSSGSDNYAVSVDAASGAVNLNTTDVTYDD-------------ATNGVTGATQNGQLIKV 279
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ V V +T +D + + +
Sbjct: 280 TSDANGAAVGYVTIQGKNYQAGATGVDVLANSGVAAPTTAVDTGTLQLSGTGATTELKGT 339
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 340 ATQNPLALLDKAIASVDKFRSSLGAVQNRLSSAVTNLNNTTTNLSEAQSRIQDADYATEV 399
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 400 SNMSKAQIVQQAGNSVLSKANQVPQQVLSLLQG 432
>gi|294140194|ref|YP_003556172.1| flagellin [Shewanella violacea DSS12]
gi|293326663|dbj|BAJ01394.1| flagellin [Shewanella violacea DSS12]
Length = 481
Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats.
Identities = 82/478 (17%), Positives = 149/478 (31%), Gaps = 30/478 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN ++M A L NL +R++SGLR++ A D+AA I+ M S L
Sbjct: 4 SVNTNVTSMKAQSNLNGAQSNLSTSMERLASGLRINSAKDDAAGLQISNRMTSQINGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M ++ +++ +++ D S+Q EI LQ++L
Sbjct: 64 AMRNANDGISIAQTAEGAMGESTNILQRMRDLSLQSANGSNSSDDRASMQKEIASLQNEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G+N L G+ + + + +
Sbjct: 124 TRIAETTSFGGQNLLDGSYGTQNFQVGSDANQTIAVTLKNVSSTSIGSNQISGSGTGSGL 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ GT D I V+ A + + S A F
Sbjct: 184 AVAGTVNAITADTITVTGNGATDTATIGVNSSAAEYAAAINGTEGTGVSATSRTEAELVF 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN---- 295
A G +I L AA ++ + + S + + N
Sbjct: 244 TPAAGTNSISFSLDVGGAAGTSSLSITNATSAQDMVDQINAGSSSIGVSATLDGANVALV 303
Query: 296 -----------------------SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
D + +T + +
Sbjct: 304 NENGDNIAVSGYAVSGTAVAAFTIAGKDEAGATTAAVTATADVIVSGNVTTNSATNHTIT 363
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ T +I +T ++ + ++ ID+ I + +G+I +R+
Sbjct: 364 GATAAEMLGGTGSILSAISTVDISDAAGAQSALAIIDSAIAGIDSNRADLGAIQNRMSFT 423
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ ++ V R+ D D A E+ ++ Q Q + L+ N LSL
Sbjct: 424 ISNLSNVQTNVADARSRIQDVDFAKETAEMTKQQILSQTSSAMLAQANQLPQVALSLL 481
>gi|313904255|ref|ZP_07837633.1| flagellin domain protein [Eubacterium cellulosolvens 6]
gi|313470805|gb|EFR66129.1| flagellin domain protein [Eubacterium cellulosolvens 6]
Length = 408
Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats.
Identities = 60/452 (13%), Positives = 128/452 (28%), Gaps = 48/452 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N A +A + L L +++SSG R++ AAD+AA +I++ M+S L
Sbjct: 2 VIQHNIPATNAYRNLTSNRSGLSKNLEKLSSGFRINRAADDAAGLAISEAMRSKINGLDQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
+ + + +++ ++ + T + SIQ E+ +L +++
Sbjct: 62 ATANANDAIGLIQTEEGALTETHSMLQRMTTLATQAANGTYNSTSRASIQKEMDELGNEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + +NG L D + S + D + +
Sbjct: 122 DRIANNTDYNGIKPLARDSNKTLDGENNSEKLNMTMQIGPTKGEVLDLKGQDMTLKGIFN 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
D + +S T + K A
Sbjct: 182 DLDKVNGITATSTGVSVPTTAGSQLVKLISDKKVDKTQAEKDLTNAVRDAMNRVGIKGAT 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ ++ + A
Sbjct: 242 SISISLSANTGSISITGA------------------------------------------ 259
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + D +K D+ + + +
Sbjct: 260 ---SNITGSKAIAVYNALADAYDALDGVQKSKGSPADTLTDGKEYIQITSSTSANDDVTA 316
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+V I + I ++ ++G+ +R+ + +++ + R+ D DMA E
Sbjct: 317 NANRVVKNIQSAIDHVSSYRAELGAKQNRLEHTINNLQVTSENTTAAESRIRDTDMAKEM 376
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q A L+ N + +LSL +
Sbjct: 377 AAYTKNNILSQAAQSMLAQANQTGQGVLSLLQ 408
>gi|239918890|gb|ACS34794.1| flagellin [Pantoea agglomerans]
Length = 428
Score = 193 bits (489), Expect = 6e-47, Method: Composition-based stats.
Identities = 66/453 (14%), Positives = 127/453 (28%), Gaps = 31/453 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSMERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
+ G S + +S+ + + ++ SIQ EI S++
Sbjct: 64 AARNANDGISAAQTTEGALSEINNNLQRVRELTVQSQNGTNSDSDLSSIQDEIKSRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + + + L S
Sbjct: 124 DRVSGQTQFNGVNVLAKDGAMKIQVGANDGETINIDLKKIDSSTLGLSGFGVSKNALKTS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ + LK S+ + S
Sbjct: 184 DAITQVGASGSLKDVDLSAVATALKVDASSLSLKNVQTSAG------------------- 224
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
++ + + + +D T
Sbjct: 225 ---------AATATYVVSSGQRQLCRFALDDATGKVALNTTDVSYTDSANGVTAGTMSGQ 275
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ T + + + A +
Sbjct: 276 FVKVGGDATGAAQGYVTVQGKDYNTATAAIANGGSGGTTGVASNIGDIASATNANVHTGS 335
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A ++ +D I +G++ +R++ + + R+ DAD A+E
Sbjct: 336 ATANPLALLDKAIASVDNFRSSLGAVQNRLNSAVTNLNNTTTNLSAAQSRIQDADYATEV 395
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ L N ++LSL +G
Sbjct: 396 SNMSKAQIVQQAGNSVLGKANQVPQQVLSLLQG 428
>gi|238922463|ref|YP_002935976.1| flagellin [Eubacterium rectale ATCC 33656]
gi|238874135|gb|ACR73842.1| flagellin [Eubacterium rectale ATCC 33656]
gi|291526743|emb|CBK92329.1| Flagellin and related hook-associated proteins [Eubacterium rectale
M104/1]
Length = 476
Score = 193 bits (489), Expect = 6e-47, Method: Composition-based stats.
Identities = 70/472 (14%), Positives = 144/472 (30%), Gaps = 25/472 (5%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ A+++L L R+SSG +++ A DN A +I+ MK+ AL
Sbjct: 3 INRNMSAVRANKQLLGTENRLSKSMKRLSSGYKINSAEDNPAGMAISNKMKAQIEALDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ + IA + + ++ I+ D K++QSEI +L ++
Sbjct: 63 KSNSSDAQNVMKIADGALGEVSSMLQRIRELAVQGASDTYSENDKKALQSEIDELTKEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTA-------SIAKSVIGSFIRDDNGKVQITTIDYYLDPE 173
I+ + +N ++ L + V R + +
Sbjct: 123 RISGDTEYNTKSLLDGSSDTRVYVRQKDANGNMTQVNSYITRINFSDNVASDKYELTVNS 182
Query: 174 TVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233
+ + + + I +K T
Sbjct: 183 LATQATGSLASATKPDAEGTISINGVSVAVKADMTQDEYIQALQKAATTAGTTMQVNGDS 242
Query: 234 AANATFDQAKGIATIPV---------------PLPAAPAAPNTTSGTSGSKSPSVAASAT 278
+ + + + ++G + S
Sbjct: 243 ISFLSNEYGSDSTVNISLSSSLKALAGAGYENADDGSGNMQLKSNGKDAVVTGGENLSDK 302
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
IR + ++V + S+ A N + +
Sbjct: 303 TIRADGNRVYVVGNSGFSMDFLLSSDMDMTAGSSNLQIDISDIGNMAVQIGANEGQEMKI 362
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ T + +T K ++ +S +D I+ + +IG+ +R+ E +
Sbjct: 363 RIPEVSSQTLYLDTVDVTVKGGADKAMSTLDEAIEYVSGVRSRIGAFQNRLESAESSLSE 422
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + ++D DMA+E T +A Q + LS N+ ++LSL
Sbjct: 423 TSENMTGAYSNIMDTDMATEMTEYAAQNILDQAGISVLSQANDLPQQVLSLL 474
>gi|16226009|gb|AAL16053.1|AF420425_1 phase-1 flagellin [Salmonella enterica subsp. enterica]
Length = 487
Score = 193 bits (489), Expect = 6e-47, Method: Composition-based stats.
Identities = 78/482 (16%), Positives = 134/482 (27%), Gaps = 47/482 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ---------ITTIDYYL 170
++ + FNG L D + A I Q D
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVDS 183
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
T LD T G L E +KD V S + TT A
Sbjct: 184 TGVTQSLDLKTAGITGATLKAGITGTTTETGSVKDGKVYYDADSKNYYVEVDFTDTTDKA 243
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPN------------------------------ 260
A G ++ N
Sbjct: 244 AHAGFYKADVDADGNVSLATGATKEAKPTNAVEVEKTIDEKPLKASSSVQDALKASGIAD 303
Query: 261 -----TTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
T + + D + AT + + T+ T
Sbjct: 304 AVAEAATVVKMSYTDKNGKTIDGGYGIKVGDDYYAATKEKDGSYSINSTSYTDKDGNTKT 363
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ S + + A E + ID +
Sbjct: 364 ALNQLGGADGKTEVVSIDGKTYNASKAAGHNFKAQPDLAEAAATTTENPLQKIDAALAQV 423
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 DALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSV 483
Query: 436 LS 437
L+
Sbjct: 484 LA 485
>gi|30059155|gb|AAO65441.1| FliC [Escherichia coli]
Length = 466
Score = 193 bits (488), Expect = 7e-47, Method: Composition-based stats.
Identities = 63/466 (13%), Positives = 131/466 (28%), Gaps = 45/466 (9%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+L +R+SSGLR++ A D+AA +IA ++ L+ S G S
Sbjct: 1 NKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISVAQTT 60
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ +++ + + I+ SIQSEI Q S++ ++ + FNG L
Sbjct: 61 EGALNEINNNLQRIRELSVQATNGTNSDSDLTSIQSEIQQRLSEIDRVSGQTQFNGVKVL 120
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+D + A I+ + + + L ++T T +G +
Sbjct: 121 ASDQDMTIQVGANDGETITIKLQEINSDTLGLSGFGIKDPTKLKAATAETTYFGSTVKLA 180
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV---- 250
+ + ++ + T+
Sbjct: 181 DANTLDADITATVKGTTTPGQRDGNIMSDANGKLYVKVAGSDKPAENGYYEVTVEDDPTS 240
Query: 251 --------------------------------------PLPAAPAAPNTTSGTSGSKSPS 272
A + +
Sbjct: 241 PDAGKLKLGALAGTQPQAGNLKEVTTVKGKGAIDVQLGTDTATASITGAKLFKLEDANGK 300
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
S I K S + + V + + V+ + +
Sbjct: 301 DTGSFALIGDDGKQYAANVDQKTGAVSVKTMSYTDADGVKHDNVKVELGGSDGKTEVVTA 360
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + ++ A E+ ++ ID + + +G+I +R
Sbjct: 361 TDGKTYSVSDLQGKSLKTDSIAAISTQKTEDPLAAIDKALSQVDSLRSNLGAIQNRFDSA 420
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+ + + R+ DAD A+E + +S Q QQ L+
Sbjct: 421 ITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQ 466
>gi|313906243|ref|ZP_07839588.1| flagellin domain protein [Eubacterium cellulosolvens 6]
gi|313468925|gb|EFR64282.1| flagellin domain protein [Eubacterium cellulosolvens 6]
Length = 406
Score = 193 bits (488), Expect = 7e-47, Method: Composition-based stats.
Identities = 63/452 (13%), Positives = 132/452 (29%), Gaps = 50/452 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N A +A + L L +++SSG R++ AAD+AA +I++ M+S L
Sbjct: 2 VIQHNIPATNAYRNLTSNRSGLSKNLEKLSSGFRINRAADDAAGLAISEAMRSKINGLDQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
+ + + +++ ++ + T + SIQ E+ +L +++
Sbjct: 62 ATANANDAIGLIQTEEGALTETHSMLQRMTTLATQAANGTYNSTSRASIQKEMDELGNEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + +NG L D G+ + L + + L
Sbjct: 122 DRIANNTDYNGIKPLAEDS---NKGSDGKNNGTKLNMTMQIGPTKGEVLDLKGQDMTLKG 178
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ + K I + D + + LA
Sbjct: 179 IFKDLDKIDTANVAANGKSVTGGSTAIKELIADKKLDATQAQKDLANAIKDAAGREGLKV 238
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + +S + + A S Y + +
Sbjct: 239 NGSISVTVNASTGAVTIDGAGYSSTIATNSKVQAALSDAYDSLDGVQKSKEDSATAHSDG 298
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
++ + T
Sbjct: 299 KEYIQITSASGEDVTANA------------------------------------------ 316
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+V I + I ++ ++G+ +R+ + +++ + R+ D DMA E
Sbjct: 317 --NRVVKNIQSAIDHVSSYRAELGAKQNRLEHTINNLQVTSENTTAAESRIRDTDMAKEM 374
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q A L+ N S +LSL +
Sbjct: 375 AAYTKNNILSQAAQSMLAQANQSGQGVLSLLQ 406
>gi|324325778|gb|ADY21038.1| flagellin [Bacillus thuringiensis serovar finitimus YBT-020]
Length = 460
Score = 193 bits (488), Expect = 8e-47, Method: Composition-based stats.
Identities = 73/458 (15%), Positives = 148/458 (32%), Gaps = 10/458 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L+
Sbjct: 3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+D G S + A + M+ +++ +++ ++ ++Q E +LQ Q+
Sbjct: 63 ADNTQNGMSLIRTADSAMNSVSNILLRMRDIANQSANGTNTDSNKSALQKEFAELQKQIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L+ D ++ S I D V + + ++
Sbjct: 123 YIADNTQFNDKNLLKEDSEVKIQTLDSSKGEQQIGIDLKAVTLEKLGINNISIGKADGTT 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI-------STKKFKLATTSGAWLK 233
L K +P K+ G + K
Sbjct: 183 EGTKADLTALQAAAKKLEKPDTGTMEKDVKDAKEEFDKVKASLSDEDVKKIEAAFGEFDK 242
Query: 234 AANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATT 293
T + I A AA ++ T D A
Sbjct: 243 DKTNTTKASDIFNAIKDVKLADKAAAAPAPADLTKFKAALDKLQTPNAGTMVDDVKDAKD 302
Query: 294 KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD 353
+ + + + D + +T
Sbjct: 303 EFEKIKGSLSDADAQKIQAAFEEFEKANTDDSKASAIYNLAKDVKVNATDTTTGTDKDTT 362
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+K A ++ ID + +G+ +R+ + +K ++ ++ DA
Sbjct: 363 TSTDKDAALAAIAAIDAALTKVADNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDA 422
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DMA E + ++ + + + LS N + + L +
Sbjct: 423 DMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 460
>gi|3098301|gb|AAC63948.1| flagellin [Pseudomonas putida]
Length = 486
Score = 193 bits (488), Expect = 8e-47, Method: Composition-based stats.
Identities = 65/484 (13%), Positives = 131/484 (27%), Gaps = 38/484 (7%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ L + R+SSGLR++ A D+AA IA + S L
Sbjct: 3 LTVNTNIASITTQGNLTKASNAQTTSMQRLSSGLRINSAKDDAAGLQIANRLTSQINGLG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G S A+ M + D++ ++ + D KS E L ++
Sbjct: 63 QAVKNANDGISIAQTAEGAMQASTDILQKMRTLALSSATGSLSAEDRKSNNDEYQALTAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I+ ++F G+ L G+ + + + + + + V
Sbjct: 123 LNRISDTTTFGGQKLLDGSYGTKAIQVGANANETINLTLDNVSAKSIGSQQIKSLAVTAS 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + V + +G I +T + T
Sbjct: 183 PTGLEANTITVTGNGQNTDVAIKAGDSAKAVAASLNGAIGGLTATASTEVKFAVDTTKFT 242
Query: 239 FDQAKGIATIPVPLPAAPAAP-----------------------------------NTTS 263
++ V + T
Sbjct: 243 TTDPSANFSMTVGGQTVEFVGVTDTASLADQLKSNAAKLGISVNYDESKGGSLSIKSDTG 302
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
+ + T + V + +S
Sbjct: 303 ENIEFSAADKGSVDALTMNVKGGDGKYGTAAIKMQEADATATPPVTGKTVVTGAISLDSA 362
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
S + + + + ++ ID I + +G
Sbjct: 363 KGYSLTGAGVTGLFDTGASVTSQKTSISETNVTDATTAQNALAVIDKAIGSIDSVRSGLG 422
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
+ +R+ D ++ ++ + D D ASE+ L+ QT QQ + LS N
Sbjct: 423 ATQNRLQTTVDNLQNIQKNSTAARSTVQDVDFASETAELTKQQTLQQASTAILSQANQLP 482
Query: 444 ARIL 447
+L
Sbjct: 483 QSVL 486
>gi|42780853|ref|NP_978100.1| flagellin [Bacillus cereus ATCC 10987]
gi|42736773|gb|AAS40708.1| flagellin [Bacillus cereus ATCC 10987]
Length = 465
Score = 192 bits (487), Expect = 9e-47, Method: Composition-based stats.
Identities = 70/463 (15%), Positives = 151/463 (32%), Gaps = 15/463 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G + + A + M+ +++ +++ + ++Q E +LQ Q+
Sbjct: 63 ANNTQDGMALIRTADSAMNSVSNILLRMRDIANQSANGTNTDKNQAALQKEFGELQKQID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L S + S S + K D +++
Sbjct: 123 YIAGNTQFNDKNLLDGSNPSISIQTLDSADQSKQISIDLKSATLEALGIKDLTVGATENT 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA------------TTS 228
+ K+ID + D + K T +
Sbjct: 183 LAKATITAKDAFDAAKDASDAAKKEIDAAAKDTPSKNDAQLAKEYIEAKATLATLKPTDA 242
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
KAA V + TT + + S +
Sbjct: 243 TYAAKAAELDAATTALNDNAKVLVDGYEKKLTTTKTKEAEYTAAKEQSTKSTAAADLVTK 302
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR 348
N++ +D + + + ++ + + + + +
Sbjct: 303 YETAKSNALGNDIAKEYLEAKTAYEANKNDISSKSRFEAAETELNKDITANKAAKVLVET 362
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
+ V ID +K +G+ +R+ + +K ++
Sbjct: 363 YEKAKTAGTTEKSLVAVDKIDEALKTIADNRATLGATLNRLDFNVNNLKSQSASMASAAS 422
Query: 409 RLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ DADMA E + ++ + + + LS N + + L +
Sbjct: 423 QIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 465
>gi|30059902|gb|AAP13323.1| FliC [Escherichia coli]
Length = 428
Score = 192 bits (487), Expect = 9e-47, Method: Composition-based stats.
Identities = 65/453 (14%), Positives = 134/453 (29%), Gaps = 31/453 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + + A I + + L S
Sbjct: 124 DRVSGQTQFNGVNVLAKNGSMAIQVGANDGQTINIDLQKIDSSTLGLGGFSVSNNALKLS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + K+ L ++ + + + +
Sbjct: 184 DSITQVGASGSLADVKLSSVASALGVDASTLTLHNVQTPAGAATANYVVSSGSDNYSVSV 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + G T+ N + S + + K +
Sbjct: 244 EDSSGTVTLNTTDIGYTDTANGVTTGSMTGKYVKVGADALGAAVGYVTVQGQNFKADAGA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
N+ ++ + +
Sbjct: 304 LVNSKNAAGSQNVTSAIGDIANKANANIYTGTSSA------------------------- 338
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 339 ---DPLALLDKAIASVDKFRSSLGAVQNRLSSAVTNLNNTTTNLSEAQSRIQDADYATEV 395
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 396 SNMSKAQIIQQAGNSVLSKANQVPQQVLSLLQG 428
>gi|46909473|gb|AAT06254.1| flagellin [uncultured bacterium]
Length = 493
Score = 192 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 70/492 (14%), Positives = 151/492 (30%), Gaps = 43/492 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N AM++++ L +++SSG ++ AADNAA +I++ M+ L+
Sbjct: 2 VVQHNLQAMNSNRMLGITQKTASKSTEKLSSGYAINRAADNAAGLAISEKMRKQIRGLTQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
S G S V A+ +++ D++ + D IQ EI QL ++
Sbjct: 62 ASTNAEDGISSVQTAEGALTEVHDMLQRMNELAIQAANGTNSEDDRSYIQDEIDQLTQEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FN L+ D + A + + + + + +V +
Sbjct: 122 DRVAETTKFNETYLLKGDTKNVDAMDYTYSYKAVTTNTVARASVLAAENTATGMSVSISF 181
Query: 180 STDG----------------------------------------TERYGLLDRNHKIKVE 199
+ + + ++
Sbjct: 182 AANSGKVTAADSNNLAKAIRDQGFTITTSTQNGKVVYGLELNGSDAKANYTVSTVSMEAG 241
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+ + + V + +T FK + + A + + A G +
Sbjct: 242 TFKILNSNKQVVASVTISTTASFKKVSGMSQIVTAYSVSAAYATGDVYSLYDADGNAISA 301
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
N + + A NS + S ++ V V + +
Sbjct: 302 NKLDKYFTAGGATEAGGIATTLSANSGVPKVYDVLGKEVSAVSIASTLVTAVKDKTAALK 361
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
D K + +M ++ + + + + I IK +
Sbjct: 362 MNFHVGADGTDNNKIKINIEAMTAKSLGVNGLKVSGSSGTNATNAIEIIAGAIKKVSTQR 421
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R+ + + + + + D DMA+E + S Q L+
Sbjct: 422 SALGAVQNRLEHTINNLDNIVENTTAAESGIRDTDMATEMVKYSNANILSQAGQSMLAQS 481
Query: 440 NNSTARILSLFR 451
N S +L L +
Sbjct: 482 NQSNQGVLQLLQ 493
>gi|325289240|ref|YP_004265421.1| flagellin domain protein [Syntrophobotulus glycolicus DSM 8271]
gi|324964641|gb|ADY55420.1| flagellin domain protein [Syntrophobotulus glycolicus DSM 8271]
Length = 413
Score = 192 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 70/451 (15%), Positives = 147/451 (32%), Gaps = 43/451 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +N +A++ +L + ++SSGLR++ AAD+AA +I++ MK L
Sbjct: 3 INSNIAALNTLNQLTQNEKSTNSSLAKLSSGLRINSAADDAAGLAISEKMKGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S V A+ +S+ ++ ++ D +IQ E++QL ++
Sbjct: 63 SSNAEDGISLVQTAEGALSETESILQRMRELAVQAASDTNTNADRVNIQDELSQLIDEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN +N L + A+ + +V+ + + T + + + ++ +
Sbjct: 123 RISQTTQFNTKNLLDGSMSGIVAADSANVLTNTQLSTTASTDVLTALTDDNGDNLGIEEN 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + A A+T L A A F
Sbjct: 183 DTIKVSWSVNGELQTASLTVGSSDTLATLFGLADLAADGTAVVDASTGDIALTAFGAGFA 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A G T+ V +S S + A
Sbjct: 243 GAIGAITVEVYGADGKENAEASSILSSFSETTAAQEGK---------------------- 280
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T+ + + + + +
Sbjct: 281 ------------------ATDGRCVLQIGANSGQTMNVTISDMGADALGIANLDVSSQDG 322
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+S ID +A +G++ +R+ + + + + ++ D DMA+E
Sbjct: 323 ANIAISVIDQATSKVSAQRSYLGAVQNRLEHTINNLDTAAENLSAAQSQIADVDMAAEMM 382
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q A L+ N ++L+L +
Sbjct: 383 EYTKNSVLTQAATAMLAQANQQPQQVLTLLQ 413
>gi|260222448|emb|CBA32022.1| B-type flagellin [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 748
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 70/493 (14%), Positives = 145/493 (29%), Gaps = 51/493 (10%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I TN +++A + L +L R+SSGLR++ A D+AA +I+ M S L+
Sbjct: 3 STINTNIQSLTAQRNLSASQASLTTSMQRLSSGLRINSAKDDAAGLAISDRMTSQIRGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S G S +A+ + + I+ +D ++Q E+ QL ++
Sbjct: 63 QASRNANDGISLAQVAEGALGSTSSNLQRIRELAVQAANGTNSASDRLALQQEVLQLTTE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ + + FNG L + + + + I + ++ +
Sbjct: 123 IARVGNQTEFNGLKLLDGSYTTQQFQVGANANQTIGVSVTSARAIDMGNNLVNSQATSPS 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK--------------- 223
+T N + + + V+ A+GT++
Sbjct: 183 MATAAVGASLGGAVNGFLAQTLTLAGNGTVNTIPATGTLAAGSSAKTVATAINAFTALSG 242
Query: 224 ---------------------------------LATTSGAWLKAANATFDQAKGIATIPV 250
AT + A + A A+ T
Sbjct: 243 VTAIATTKATISNVTTGSVQFQLTGANSTPIVVSATVNNASDLSPLAQAINAQSGTTGIT 302
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
+ T + + T + + G +T
Sbjct: 303 AVADKTGNLVLTQADGDDIKMLNLNTTGGMTGAIVVGEDALTPVSFQPATGGTPGATTDV 362
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
V S+ + + + + + +D
Sbjct: 363 AIAIGGKVALNSSNGFTISSTDTTGTLIAGGTAGSALSSVAAIDISTQAGANAALLVVDG 422
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ +A ++G+I +R + ++ + + R+ DAD A E+ LS Q QQ
Sbjct: 423 ALASVSANRAQLGAIQNRFLTTIENLQTNSENLSASRSRIQDADFAMETANLSRTQILQQ 482
Query: 431 LAVQALSIVNNST 443
++ N
Sbjct: 483 AGTAMVAQANQLP 495
>gi|30059890|gb|AAP13317.1| FliC [Escherichia coli]
Length = 455
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 58/455 (12%), Positives = 116/455 (25%), Gaps = 34/455 (7%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+L +R+SSGLR++ A D+AA +IA ++ L+ S G S
Sbjct: 1 NKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISVAQTT 60
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ +++ + + ++ SIQ+EITQ ++ ++ + FNG L
Sbjct: 61 EGALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEIDRVSEQTQFNGVKVL 120
Query: 135 RTDLGSSTASIAKSVIGSFIR-------------------------------DDNGKVQI 163
+ A I G
Sbjct: 121 AENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATGSDLISKFKATGTDNY 180
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
V + + + K + +
Sbjct: 181 QINGTDNYTVNVDSGAVQNEDGDAIFVSATDGSLTTKSDTKVGGTGIDATGLAKAAVSLA 240
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
+ A + T + + K ++ S +
Sbjct: 241 KDASIKYQGITFTNKGTDAFDGSGNGTLTANIDGKDVTFTIDATGKDATLKTSDPVYKNS 300
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ T+ N+ + + D + S
Sbjct: 301 AGQFTTTKVENKAATASDLDLNNAKKVGSSLVVNGADYEVSADGKTVTGLGKTMYLSKSE 360
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
DA + + ID + +G++ +R + + +
Sbjct: 361 GGSPILVKEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGAVQNRFDSAITNLGNTVNNL 420
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
R+ DAD A+E + +S Q QQ L+
Sbjct: 421 SSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQ 455
>gi|68533173|dbj|BAE06132.1| Flagellin [Campylobacter lari]
Length = 492
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 72/488 (14%), Positives = 138/488 (28%), Gaps = 40/488 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN AM+A L+ R+SSGLR++ AAD+A+ +IA +++ +L
Sbjct: 5 INTNIGAMNAHANSVITARELDKSLGRLSSGLRINSAADDASGMAIADSLRNQAASLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + IQ+EI +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKVKATQAAQDGQTAKTRTMIQNEINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFVNQEFQIGAQSNQTVHATIGPTQSGKIGHTRFETGIRVTGSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T N + + + + I+ K + A ++ ++
Sbjct: 185 TSNLVLKSYDGVNGYEFQSVVISTSVGTGLGALADEINKVADKTGVRATAVVQTISSGAL 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV----------- 289
A + G + + + +
Sbjct: 245 PAGTTGLDFAINGVVIGQVDVKPGDKDGALAAAINAKKDTTGVEASVVDGKLILNSADGR 304
Query: 290 --------------------------RATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
I G T +
Sbjct: 305 GIELSGSLGTALSGVVASVNYGRLSLVKNDGRDIIVSGGSTIGFGQSGSSAAQATVNLEA 364
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+M T + + ++ D+ I IG
Sbjct: 365 VKGQISADIACAMGFNAMSTADNITTPKSAGVTTLQGAMAVMDLADSAITTLDNIRADIG 424
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
++ ++I + I + + ++ + D D A+ES S Q A+S N
Sbjct: 425 AVQNQITSTINNISVTQVNIKSAESTIRDVDFAAESANFSKYNILAQSGSYAMSQANAVQ 484
Query: 444 ARILSLFR 451
+L L +
Sbjct: 485 QNVLKLLQ 492
>gi|16901496|gb|AAL30166.1|AF345849_1 flagellin [Escherichia coli]
Length = 428
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 65/453 (14%), Positives = 134/453 (29%), Gaps = 31/453 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + + A I + + L S
Sbjct: 124 DRVSGQTQFNGVNVLAKNGSMAIQVGANDGQTINIDLQKIDSSTLGLGGFSVSNNALKLS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + K+ L ++ + + + +
Sbjct: 184 DSITQVGASGSLADVKLSSVASALGVDASTLTLHNVQTPAGAATANYVVSSGSDNYSVSV 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + G T+ N + S + + K +
Sbjct: 244 EDSSGTVTLNTTDIGYTDTANGVTTGSMTGKYVKVGADALGAAVGYVTVQGQNFKADAGA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
N+ ++ + +
Sbjct: 304 LVNSKNAAGSQNVTSAIGDIANKANANIYTGTSSA------------------------- 338
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 339 ---DPLALLDKAIASVHKFRSSLGAVQNRLSSAVTNLNNTTTNLSEAQSRIQDADYATEV 395
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 396 SNMSKAQIIQQAGNSVLSKANQVPQQVLSLLQG 428
>gi|283853595|ref|ZP_06370832.1| flagellin domain protein [Desulfovibrio sp. FW1012B]
gi|283571020|gb|EFC19043.1| flagellin domain protein [Desulfovibrio sp. FW1012B]
Length = 451
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 65/454 (14%), Positives = 132/454 (29%), Gaps = 8/454 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N A++A++ L + L R+SSGLR++ AAD+AA +I ++M+SD ++
Sbjct: 3 LVINHNLMAINAARNLSNSYGALATSTRRLSSGLRINGAADDAAGLAIRELMRSDVSTMN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K I SE + S+
Sbjct: 63 QGIRNANDAVSLIQTADGALQVVDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG + L +L S ++ G ++ DYY +
Sbjct: 123 ITRIAMATDFNGIHLLNGNLSSIVHMGNGLSSAGKLKVHFGTGNNSSEDYYYVQIENMTA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + + + +
Sbjct: 183 E-----ALSLGSNATAEDAISRISGYWAADLYQTFKPLEESGDITTDDFNELINDYPAYL 237
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
++ + S S + A K
Sbjct: 238 SERMTEWSIPTSQATFDAIRQRYLDLPSEGYPDSYVNPPVTTWDEYQALDSFAQEKIKFQ 297
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+G + + ++ + S + + +
Sbjct: 298 WARAAATKLGNYIGAPDPAIPSAPASISPYEFTSYSQSVTDSTDWFLDKYDYSGNTIRTQ 357
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+ + I I A +G++ +R+ +++ + + ++ D D+ASE
Sbjct: 358 EDAQNALDAISKAIINKDKARASLGAVQNRLENTISNLQIQAENLMASESQISDVDVASE 417
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
T Q Q AV L+ N+ + L G
Sbjct: 418 MTEFVRQQILTQAAVAMLAQANSLPKMAMQLISG 451
>gi|49854236|gb|AAT68767.1| flagellar antigen H1:c [Salmonella enterica]
Length = 491
Score = 191 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 72/488 (14%), Positives = 140/488 (28%), Gaps = 49/488 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI------------------------- 154
++ + FNG L D + A I
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKKYDVSD 183
Query: 155 -----RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ K I D + +S + + ++ K D +
Sbjct: 184 TAVAASYSDSKQNIAVPDKTAITAKIGAATSGGAGIKADISFKDGKYYATVSGYDDAADT 243
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
+ + ++ A T + D A +G
Sbjct: 244 DKNGTYEVTVAADTGAVTFATTPTVVDLPTDAKAVSKVQQNDTEIAATNAKAALKAAGVA 303
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + + + GY ++V K G V + +
Sbjct: 304 DAEADTATLVKMSYTDNNGKVIDGGFAFKTSGGYYAASVDKSGAASLKVTSYVDATTGTE 363
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAME----------------EMVSFIDTQIK 373
G T +T T ++ + ID +
Sbjct: 364 KTAANKLGGADGKTEVVTIDGKTYNASKAAGHNFKAQPELAEAAATTTENPLQKIDAALA 423
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 424 QVDALRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGT 483
Query: 434 QALSIVNN 441
L+ N
Sbjct: 484 SVLAQANQ 491
>gi|113911605|gb|ABI48284.1| Fla3 flagellin [Lachnospiraceae bacterium A4]
gi|113911610|gb|ABI48287.1| Fla3 flagellin [Lachnospiraceae bacterium A4]
Length = 484
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 66/483 (13%), Positives = 140/483 (28%), Gaps = 34/483 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N AM+A++ L N L +++SSG +V+ AAD+AA SI++ M+ L+
Sbjct: 2 VVQHNLRAMNANRMLGITNSGLSKSSEKLSSGYKVNRAADDAAGLSISEKMRKQIRGLTQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQL 119
S G S V A+ +++ D++ + G +D ++IQ E+ QL +++
Sbjct: 62 ASVNAEDGISAVQTAEGALTEVHDMLQRMNELAVKAANGTNSVSDRQTIQDEVDQLLTEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FN L+ ++ G NG T + L + +
Sbjct: 122 DRVAETTKFNELYLLKGQAEKIDVYLSAKDAGLKGTLMNGATSATFMMDELKFGDKITIA 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + K ++ D T + + +
Sbjct: 182 GKVYSIGIPAEAGVSAASIAIAGAKAGELITIDGVQYTVTDGIENEDKNLLSISHIQGRI 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
I + + + + I+ K+S +
Sbjct: 242 SVQSKILYNGTTYNVMKDEDGNGIADTDAAIVTSFRAYQMIQRELELANSVGANKSSASV 301
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+T + ++ +
Sbjct: 302 LSVQMKATATVASTKVNTTGGAAGASQVTTVTKAVFTIAVKGLSEVREELNFSLHVGADA 361
Query: 360 AMEEMVSFIDTQIKC-------------------------------ATAAAGKIGSISSR 388
M + + +A +G++ +R
Sbjct: 362 DMTNKIGVSIDALDTKGLGIYGLNVKDDSGSAATYAIDAIADAVAHVSAQRSLLGAVQNR 421
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + + + D DMA+E + S Q L+ N + +LS
Sbjct: 422 LEHTINNLDNVVENTTAAESTIRDTDMATEMVKFSNSNILAQAGQSMLAQSNQANQGVLS 481
Query: 449 LFR 451
L +
Sbjct: 482 LLQ 484
>gi|320530025|ref|ZP_08031099.1| bacterial flagellin [Selenomonas artemidis F0399]
gi|320137733|gb|EFW29641.1| bacterial flagellin [Selenomonas artemidis F0399]
Length = 472
Score = 190 bits (481), Expect = 4e-46, Method: Composition-based stats.
Identities = 67/453 (14%), Positives = 141/453 (31%), Gaps = 4/453 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N SA++ L L ++VSSG++++ A D+A+ +I++ M+ AL
Sbjct: 20 VVKNNISAVNTLNTLNKNQSGLSKSLEKVSSGMKINSAGDDASGMAISERMRVQVRALDQ 79
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
+ G++ + A+ + I+++ T+K K D IQ E+ +L Q+
Sbjct: 80 DNANTNNGNALMRTAQGAVQSTIEILKTLKEKAINAANDTNTDEDRALIQKEVDKLIDQI 139
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
D A + + S + SF +
Sbjct: 140 DDNALTTYNGKYLIDGSHNMSVNGDAGQGTYSSFTNMSLATNTTSITRLTNLVRRDGNPV 199
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T+ + + + + A I+ + +
Sbjct: 200 GIHPTDSLTASWTRNGVTYTGTLNPVGTNDLAAAINIITNTDASYYSRTSKVGIDEYGKE 259
Query: 240 DQAKGIATI-PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ + T K + + ++ S
Sbjct: 260 VHTPDNQPAITIRASNPGVNGQISGVTFAVKDRNGHMRNEVNAVLDAFKETVRAQNPSPD 319
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ T A + D S L + D G +++ K
Sbjct: 320 NALTLQTGTRANQATKVGFTDMRSVALGLQSDNGAVWHGGTLPAGVDVVGRGPKIQVTTK 379
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
A ++ + + AT A IG++ +R+ + + + V+ + D+DMA E
Sbjct: 380 EAANAAINVFENALIKATDQAVAIGAVQTRLGYTSSNLTVASENVQASESTIRDSDMAKE 439
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
T + Q + L+ N +++ +LSL +
Sbjct: 440 MTAYTKHNVLTQASQAMLAQANQNSSSVLSLLK 472
>gi|308187264|ref|YP_003931395.1| Flagellin (Flagellin core protein) [Pantoea vagans C9-1]
gi|308057774|gb|ADO09946.1| Flagellin (Flagellin core protein) [Pantoea vagans C9-1]
Length = 427
Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats.
Identities = 68/453 (15%), Positives = 126/453 (27%), Gaps = 32/453 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSMERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
+ G S + +S+ + + ++ SIQ EI S++
Sbjct: 64 AARNANDGISAAQTTEGALSEINNNLQRVRELTVQSQNGTNSDSDLSSIQDEIKSRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + + + L S
Sbjct: 124 DRVSGQTQFNGVNVLAKDGAMKIQVGANDGETINIDLKKIDSSTLGLSGFGVSKNALKTS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ + LK S+ + S + +
Sbjct: 184 DAITQVGASGSLKDVDLSAVATALKVDASSLSLKNVQTSAGAATSTYVVSSGSDNYAVSV 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D G + + D T
Sbjct: 244 DDTTGKVALNTTDVSYT-----------------------------DSANGVTAGTMSGQ 274
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ T + + A +
Sbjct: 275 FVKVGGDATGAAQGYVTVQGKDYNTAAGAIVNGGATGTTAVASNIGDIASATNTNVHTGS 334
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A ++ +D I +G++ +R++ + + R+ DAD A+E
Sbjct: 335 ATANPLALLDKAIASVDNFRSSLGAVQNRLNSAVTNLNNTTTNLSAAQSRIQDADYATEV 394
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ L N ++LSL +G
Sbjct: 395 SNMSKAQIVQQAGNSVLGKANQVPQQVLSLLQG 427
>gi|319650638|ref|ZP_08004778.1| hypothetical protein HMPREF1013_01383 [Bacillus sp. 2_A_57_CT2]
gi|317397819|gb|EFV78517.1| hypothetical protein HMPREF1013_01383 [Bacillus sp. 2_A_57_CT2]
Length = 418
Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats.
Identities = 63/451 (13%), Positives = 132/451 (29%), Gaps = 38/451 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++L +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTYRQLNSAAGAQSKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +IQ EI QL +++
Sbjct: 63 SKNSQDAISMIQTAEGALNETHSILQRMRELAVQSSNDTNTTEDRSNIQDEINQLGEEIQ 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN + L D+G +
Sbjct: 123 RIGEQTEFNTKKLLNGDMG-----------------------------------AGQATE 147
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T ++ V + + TI+ T L
Sbjct: 148 THVVSNSLHSTMAGTTTLDSLVDANGNNVGLANGDTITATWSVGGTQYSKTLTIGTTAGT 207
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
T+ + + A+A + + + + + +
Sbjct: 208 DTAADLTLSDIADTIATDGTIDTAAFTGNKLDITATAAGTAGQINGLSIEVKSSAGVRKE 267
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ V + + + + T + K
Sbjct: 268 AASNALSNFSTTTEAKDVRADGSADFQIGSNQGQTLNLSFEDMRADTLGVRNLQVSTKSQ 327
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+S +D I+ + K+G+ +R+ + + + + R+ D DMA E
Sbjct: 328 AGTAISVLDEAIQKVSKERSKLGANQNRLEHTINNLNTSSENLTAAESRIRDVDMAKEMM 387
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q A L+ N +L L R
Sbjct: 388 EQTKNSILSQAAQAMLAQANQQPQGVLQLLR 418
>gi|229090723|ref|ZP_04221956.1| Flagellin [Bacillus cereus Rock3-42]
gi|228692665|gb|EEL46391.1| Flagellin [Bacillus cereus Rock3-42]
Length = 464
Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats.
Identities = 64/464 (13%), Positives = 144/464 (31%), Gaps = 23/464 (4%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R+++A+D+AA +IA M++ L ++ G
Sbjct: 1 MRTQEYMRQNQAKMSTAMDRLSSGKRINNASDDAAGLAIATRMRARENGLGVAANNTQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + A + M+ +++ +++ + ++ E T L+ Q+ I+ +
Sbjct: 61 MSLIRTADSAMNSVSNILLRMRDLANQSANGTNTDKNKAALDKEFTALKEQIDYISNNTE 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTI--------------------D 167
FN + L S + S + D N T
Sbjct: 121 FNDKKLLDGSNKSISIQTLDSDDKTKQIDINLSNTSTVALKLDKLGINGAAAGAPIKGAV 180
Query: 168 YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
G + + +V + I + K++
Sbjct: 181 AGDISNASAKADVLKNYTVAGDTEADKAANRTTKVEEFIAEFDKVKDSMNAEDVAKVSAA 240
Query: 228 SGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
+ A A +A A AA ++ KS + A T +
Sbjct: 241 IEKFNAAGGAGNTEANINAIGNAYKNAATPIDAADVTSATGKSNELIALTTVADGSGTGD 300
Query: 288 WVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT 347
T + + + + +++ ++ +
Sbjct: 301 TPEKRTAAVKAFADEFNKVKGGMSQEAATKIASAIDNFNKIDGSGNTLEAARAIGEAFKS 360
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
T + + ID ++ + +G+ +R+ + +K ++
Sbjct: 361 ATTTTPTSSTAGDASAAIKAIDAALETIASNRATLGATLNRLDFNVNNLKNQSASMASAA 420
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ DADMA E + ++ + + + LS N + + L +
Sbjct: 421 SQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 464
>gi|156934659|ref|YP_001438575.1| hypothetical protein ESA_02494 [Cronobacter sakazakii ATCC BAA-894]
gi|156532913|gb|ABU77739.1| hypothetical protein ESA_02494 [Cronobacter sakazakii ATCC BAA-894]
Length = 483
Score = 189 bits (479), Expect = 8e-46, Method: Composition-based stats.
Identities = 71/483 (14%), Positives = 150/483 (31%), Gaps = 32/483 (6%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +I N + S + + +L +R+SSG+R++ A D+AA +IA M + A
Sbjct: 1 MATIFNNLMSGSVLTQQKKTAASLSQSIERLSSGMRINSAKDDAAGQAIANRMSATLRAN 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQS 117
S ++ G S A+ +S+ D+++ K+ +D +I +E +++++
Sbjct: 61 DVASRSMNDGVSLSQTAEGALSEVTDLLTRAKSLAVQSATGTLDASDRAAISAEFSEIKA 120
Query: 118 QLRDIARGSSFNGENWLRTD----------LGSSTASIAKSVIGSFIRDDNGKVQITTID 167
Q+ I+ G++ G+ L + + V G +G V + I
Sbjct: 121 QIDAISTGTTIFGKYPLAPAASPPPPASQLGNIPSINQRFPVPGQQYTFTSGLVPLAYIP 180
Query: 168 YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
T+ ++S + + P D + + + +
Sbjct: 181 AGATDITLTINSGWMDDDIQLFSRDGSHLVGTPVNGPTRDFTWTNNGVNSTATANTKIIS 240
Query: 228 SGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
+ + D + + S + N +
Sbjct: 241 TDNGFLPGASYSDANLTQGPPTYNVSGGAVKQYNGMTITYSGDGDRYETPATGWANNGTV 300
Query: 288 W-------------------VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + + + +
Sbjct: 301 SPGNYLERLSIDKVTEDVIIMVVGNGSFYGQMTWTKLPKPTDPPDNGPVSTDTDIVMSAD 360
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ + + T +T + + + + + ID I +A G GS+ +
Sbjct: 361 YGEAVQYKTIPGTPSDTKTLGLDTARLDNQQSASQAIDAIDHAIDTVSAYRGTYGSLVNT 420
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + A R+ DAD A E++ LS Q QQ L+ N +LS
Sbjct: 421 FDSAKAGLAQDTAATTAARSRIEDADFAQEASNLSRTQILQQAGDAVLAQANQQAQNVLS 480
Query: 449 LFR 451
L +
Sbjct: 481 LLK 483
>gi|119503653|ref|ZP_01625736.1| flagellin [marine gamma proteobacterium HTCC2080]
gi|119460715|gb|EAW41807.1| flagellin [marine gamma proteobacterium HTCC2080]
Length = 505
Score = 189 bits (479), Expect = 8e-46, Method: Composition-based stats.
Identities = 67/502 (13%), Positives = 147/502 (29%), Gaps = 53/502 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I TN ++++A + L + R+SSGLR++ A D+AA +I+ + S ++
Sbjct: 4 TINTNVASLNAQRNLNSSQSDANTALQRLSSGLRINSAKDDAAGLAISNRLTSQINGINQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G G S IA+ +++ D++ ++ D ++Q E+ QLQ ++
Sbjct: 64 AIRNAGDGISVAQIAEGALAETGDILQRLRELAVQSANSSNSGADRAALQVEVAQLQEEM 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY----------- 168
IA +SF + L S T + V + +
Sbjct: 124 NRIANTTSFGDKKLLNGSFSSETFQVGAQVGETITFSISSARATDLGQAFDVTNMLDNLQ 183
Query: 169 ---------------------------------------YLDPETVLLDSSTDGTERYGL 189
+ + S T
Sbjct: 184 NAGRGATAAAANAITAQNLIFSVGTETTTVAVAADSSAKQIASDISSNVSGLTATASTSA 243
Query: 190 LDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIP 249
+ + + + + ++ T + A A ++
Sbjct: 244 TIQFANDDTQGSATFAVTIQGQTLAVDMTQATLSATTGAAKAAALKTAIDSNAALSGSLT 303
Query: 250 VPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
V + G + + +AT M + ++ ++
Sbjct: 304 VSIADDTITLVDADGDNITIVGDTGNTATATDMTIDSGGTGSVVVDNQAANLAAVAVGAI 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ + D+ + + + T + + + ID
Sbjct: 364 TLTAASNTTVAVYSDTDTTVSGSSSVAAQDTGTVAAGTSRISDVDISTVTGANTALGLID 423
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ +G++ +R + + + R+ DAD A E+ L+ Q Q
Sbjct: 424 AALTTLNTQRATLGAVQNRFDSVISNLSNVSENSSAARSRIQDADFAQETANLARAQILQ 483
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q + L+ N +L+L +
Sbjct: 484 QAGISVLAQANAQPQNVLALLQ 505
>gi|213027037|ref|ZP_03341484.1| flagellin [Salmonella enterica subsp. enterica serovar Typhi str.
404ty]
Length = 456
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 75/456 (16%), Positives = 144/456 (31%), Gaps = 36/456 (7%)
Query: 32 SSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTI 91
SSGLR++ A D+AA +IA S+ L+ S G S + +++ + + +
Sbjct: 1 SSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISVAQTTEGALNEINNNLQRV 60
Query: 92 KNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
+ SIQ+EITQ ++ ++ + FNG L + A
Sbjct: 61 RELSVQATNGTNSDSDLSSIQAEITQRLEEIDRVSDQTQFNGVKVLAENNEMKIQVGAND 120
Query: 149 VIG---------------------------------SFIRDDNGKVQITTIDYYLDPETV 175
F + Y ++ E+
Sbjct: 121 GETITINLAKIDAKTLGLDGFNINGATKATASDLVSKFKATGTDNYDVAGNTYTVNIESG 180
Query: 176 LLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
+ +ST + +D + + +VL + A+ + T G K
Sbjct: 181 AVQNSTGNSMYISAVDGSLTTSNDTKVLGQGVDATALAAAGQGKAQDATFTLKGIEYKVT 240
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
+A G + + ++ T+G+ + Y + + + K
Sbjct: 241 SAATTNGNGTYEATINNEKVVFTISGSTATTGTAASLATDKPIYKTAAGTLTTEQVSNKA 300
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
+ SD N + + + D N DA
Sbjct: 301 ATVSDLDIKNGKKTGSSLVVDGQNYKVSKDGVVTDAVDNKVMYVGKSQGGSPILVNADAA 360
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ E+ + ID + A +G++ +R + + + R+ D+D
Sbjct: 361 KTMQSTEKPLETIDKALAKVDALRSDLGAVQNRFDSAITNLGNTVNNLSSARSRIEDSDY 420
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+E + +S Q QQ L+ N +T +LSL R
Sbjct: 421 ATEVSNMSRAQILQQAGTSVLAQANQTTQNVLSLLR 456
>gi|194292850|ref|YP_002008757.1| flagellin [Cupriavidus taiwanensis LMG 19424]
gi|193226754|emb|CAQ72705.1| FliC: flagellar biosynthesis; flagellin, filament structural
protein [Cupriavidus taiwanensis LMG 19424]
Length = 410
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 67/452 (14%), Positives = 137/452 (30%), Gaps = 48/452 (10%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + +L R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLMTQNNMNASQSSLNTAIQRLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S + +++ + + I+ +D KSIQ EI Q ++
Sbjct: 64 AQRNANDGISLAQTTEGALTEVNNNLQRIRELSVQAANGSNSASDLKSIQDEIKQRLQEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ + FNG L + T + + + D T +
Sbjct: 124 DRTSAQTDFNGVKVLSSAAKDLTIQVGANDSETITIDLEEISSTTLNLTSFNVNGPKARG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ H + Q + ++ +S T +T
Sbjct: 184 ANTFDGAAVATTAAHAAAADFQAVFGSSTALTTSSVTETTAGTLA--------------- 228
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A + +++ ++ +S T
Sbjct: 229 ----TKLGVASGSVAFTNRAIVDGNGNWFAEVTISPASAAESTALKASGFDIANGSSQTF 284
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G + T +++ +D + ++
Sbjct: 285 YVGIDAANPTSTSGTTATYSIDTSKIDV--------------------------SALQRG 318
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A ++ ID ++ +G++ +R + + R+ DAD A+E
Sbjct: 319 ATSNPLAAIDAALQKVDDLRSSLGAVQNRFDSVIANLGTTVTNLSASRSRIQDADYATEV 378
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ Q QQ L+ N +T +LSL R
Sbjct: 379 SNMTRAQILQQAGTSVLAQANQTTQNVLSLLR 410
>gi|224373626|ref|YP_002607998.1| major flagellin subunit FlaA_2 [Nautilia profundicola AmH]
gi|223589819|gb|ACM93555.1| major flagellin subunit FlaA_2 [Nautilia profundicola AmH]
Length = 493
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 66/489 (13%), Positives = 137/489 (28%), Gaps = 41/489 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A N NL +++S+GLR++ AAD+A+ IA ++ +L
Sbjct: 5 INTNVAALNAHAAGVANNRNLSSSLEKLSTGLRINKAADDASGLQIADALRDQADSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
IA M + + +++TIK K T + G K++Q +I +L +L
Sbjct: 65 IRNANDAIGLFQIADKAMDEQVKILNTIKVKATQAAQDGQSADSRKALQEDIVRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +S+NG L + I + + + ++
Sbjct: 125 NIAGTTSYNGMTLLSGQFTNKEFQIGAYSNETVKASIGPTSSDKIGLTRFETGAKITAAA 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + V + + I+ K+ + + +
Sbjct: 185 NVNLTFKAVDGIHDVNIESVIVSTSAGTGIGVLAEVINKNSDKIGVKATWQVLTTGSAAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
I + + + + S K + + + + R
Sbjct: 245 AGGDIKGLTINGVTIGDIIDVKANDSDGKLVAAINAVKDQTGVEAYVDERGNLNLRSLDG 304
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTL----------------------------------- 325
G S +
Sbjct: 305 RGIKISGTGINSIAGLRSNKIENYGRLTLTRLDARDIIISGTASLAGFNGNEAQTTINLR 364
Query: 326 ---DSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKI 382
+ ++ + ++ D I
Sbjct: 365 SIKGNFTADQASAIGAFANSNVPYFGDKIGAGVTSLRGAMAVMDIADAAAHYLDKIRADI 424
Query: 383 GSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNS 442
GS+ +++ + I + + V+ ++ D D A E+ Q ALS N
Sbjct: 425 GSVQNQLVSTINNISVTQVNVKAAESQIRDVDFAEETANFQKYNVLAQSGSYALSQANAV 484
Query: 443 TARILSLFR 451
+L L +
Sbjct: 485 QQNVLKLLQ 493
>gi|313896728|ref|ZP_07830276.1| putative flagellin protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312974645|gb|EFR40112.1| putative flagellin protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 456
Score = 188 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 67/453 (14%), Positives = 141/453 (31%), Gaps = 4/453 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N SA++ L L ++VSSG++++ A D+A+ +I++ M+ AL
Sbjct: 4 VVKNNISAVNTLNTLNKNQSGLSKSLEKVSSGMKINSAGDDASGMAISERMRVQVRALDQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
+ G++ + A+ + I+++ T+K K D IQ E+ +L Q+
Sbjct: 64 DNANTNNGNALMRTAQGAVQSTIEILKTLKEKAINAANDTNTDEDRALIQKEVDKLIDQI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
D A + + S + SF +
Sbjct: 124 DDNALTTYNGKYLIDGSHNMSVNGDAGQGTYSSFTNMSLATNTTSITRLTNLVRRDGNPV 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T+ + + + + A I+ + +
Sbjct: 184 GIHPTDSLTASWTRNGVTYTGTLNPVGTNDLAAAINIITNTDASYYSRTSKVGIDEYGKE 243
Query: 240 DQAKGIATI-PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ + T K + + ++ S
Sbjct: 244 VHTPDNQPAITIRASNPGVNGQISGVTFAVKDRNGHMRNEVNAVLDAFKETVRAQNPSPD 303
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ T A + D S L + D G +++ K
Sbjct: 304 NALTLQTGTRANQATKVGFTDMRSVALGLQSDNGAGWHGGTLPAGVDVVGRGPKIQVTTK 363
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
A ++ + + AT A IG++ +R+ + + + V+ + D+DMA E
Sbjct: 364 EAANAAINVFENALIKATDQAVAIGAVQTRLGYTSSNLTVASENVQASESTIRDSDMAKE 423
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
T + Q + L+ N +++ +LSL +
Sbjct: 424 MTAYTKHNVLTQASQAMLAQANQNSSSVLSLLK 456
>gi|117618016|ref|YP_856752.1| flagellin [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117559423|gb|ABK36371.1| flagellin [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 504
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 80/501 (15%), Positives = 160/501 (31%), Gaps = 51/501 (10%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN SA++AS+ L L+ V R+SSGLR++ AAD+AA I+ + S+ +
Sbjct: 3 LSIATNVSALNASRHLGQSANTLDSVYRRLSSGLRINSAADDAAGLQISNRLTSEVNGTN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S +++A + +++++M ++ D ++ +E QLQ +
Sbjct: 63 TAIRNANDGISVINVADGALDESVNLMQRMRTLALQSGSGANTAEDRAALNAEFKQLQLE 122
Query: 119 LRDIARGSSFNGENWLRTDL--------------------------GSSTASIAKSVIGS 152
+ IA G+ F G++ L G
Sbjct: 123 MDRIATGTRFAGQDLLVGSYKGIFSVGAYAGQNTVITDLNAQTKNLGEMEWQARSPAGSK 182
Query: 153 FIRDDNGKVQITTIDYYLDPETVLLDSST----------------DGTERYGLLDRNHKI 196
D +++++ L+ T D ST +G + L +
Sbjct: 183 PGAYDIADLKLSSQPVTLNGVTFDKDYSTLEAFVADINGTTFPNNEGPVKAQQLPFSVAS 242
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP--- 253
V+ L + + K + A+ I +
Sbjct: 243 AVDLSALPSYIDVAGHSVDLTTGIDMTGWDPVNPTAKNSAIMATVAQRINSTAQAAGLGF 302
Query: 254 ---AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
A+ + ++ + + + + A +S +S
Sbjct: 303 YVSASNNSNPASNALTMHSAQGNSLALANGTTAPPQPAPPAPPVSSNSSLSALLPDVTPT 362
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ + + +++ + + +D
Sbjct: 363 TYIGQIELHSSGDKYSNIDMQGASLNALGFYQADKKKYTVDNIDVLNNDNASRAIKTLDV 422
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+K ++G+ ++ + + + + + R+ DADMASES RL Q QQ
Sbjct: 423 GMKQLGVQRARLGAQANALDARVRNLANANENLSAARSRIRDADMASESARLVRTQILQQ 482
Query: 431 LAVQALSIVNNSTARILSLFR 451
+ LS N+ LSL +
Sbjct: 483 ASSSILSQANSRPNMALSLLQ 503
>gi|251781265|ref|ZP_04824181.1| FlaB [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243081712|gb|EES47773.1| FlaB [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 506
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 65/504 (12%), Positives = 134/504 (26%), Gaps = 56/504 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNMNAMNAHRQMSANTVNSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S S + A+ G+++ ++ ++ D IQ EI QL S++
Sbjct: 63 SRNSQDAISMIQTAEGGLNETHSILQRMRELGVQAGNDTNTDKDRLEIQKEINQLTSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN---------------------- 158
I + FN ++ L+ + + V G
Sbjct: 123 RIGNTTEFNNQSVLKGNADVKATNTTPGVKGEAAVTAKESSGTIADLTIKAGTENGDKGN 182
Query: 159 ----------------------------GKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
++ ++
Sbjct: 183 IKVEVKVASDDNLAVSWGADGKLTISLANTTDSKNTANLIETAVKAATANAPDGLDMSKF 242
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
+ D+ V + + + +
Sbjct: 243 TVTGTLDKAKVGEVDLAGGVTGKAELTAVANVDEISGELKAGEITVDGKKLTIAGDDQDA 302
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
A + + ++T + V
Sbjct: 303 LYKDLKAKIEADTDLKAKYTVGAYTDKDNKITLTQASGKESSTGVKVQVAEKSFTMQVGA 362
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI-- 368
N + E ++ + N T + N + + + + +
Sbjct: 363 NENQTMTLAFEDMRANNLGLTGTGDGYTKASTVTNGTNNDNVENALDVSNSKNAGNAVTK 422
Query: 369 -DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
I +A K+G+ +R+ + + + + R+ D DMA E S
Sbjct: 423 IQDAINQVSAERSKLGAYQNRLEHTINNLGTSSENLTSAESRIRDVDMAKEMMTFSKNNI 482
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
Q A L+ N +L L R
Sbjct: 483 LAQAAQAMLAQANQQPQGVLQLLR 506
>gi|114706706|ref|ZP_01439606.1| flagellin C protein [Fulvimarina pelagi HTCC2506]
gi|114537654|gb|EAU40778.1| flagellin C protein [Fulvimarina pelagi HTCC2506]
Length = 424
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 136/451 (30%), Positives = 210/451 (46%), Gaps = 27/451 (5%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN +AM+A Q L+ N ++ Q+R+S+G RV A+DNAAYWSIA M+SD A+
Sbjct: 1 MTSINTNVAAMTALQTLQSTNSMMDDTQNRISTGYRVGQASDNAAYWSIATTMRSDVKAM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S+V+D++G+G+S VD A +S + DV+ IK K+T + G D +Q EITQLQ+QL+
Sbjct: 61 SSVADSLGIGASTVDTAYEALSASKDVLDEIKAKLTTATQDGVDRTKVQDEITQLQNQLK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SF+G+NWL D +++ + +K +I SF R G + + +I + S
Sbjct: 121 SIASSASFSGQNWLSIDSSAASYTSSKDMISSFSRSAGGSLSVGSIRVDTSSFALFDASG 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + + A
Sbjct: 181 TKSGIIDSGKVNMTAVTLGAGTSAA---------------------------GTAGPPAT 213
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
P + + + + T + ++ ++ +
Sbjct: 214 SGTYTPAAPTAAFTLDSDDMISFTLAVDGGTAQKVLITKGIIDDALGTTDGVVSSANYAK 273
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
A V T T +S + S ++ ++ T + + +
Sbjct: 274 VFAKAVDFANVTGVSVNATTGVVTSNSTGTTSTVAFAAGSSDSIGVSEMDITKSTVKTVD 333
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ++ +D+ I TAAA +GS+ +RI +Q F+ + D EKG+G LVDADM EST
Sbjct: 334 IKAYINIVDSAISKVTAAASTLGSVKNRIDIQTSFVNNLMDTFEKGIGTLVDADMTEEST 393
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+L ALQTQQQL VQALSI NNST +L LFR
Sbjct: 394 KLKALQTQQQLGVQALSIANNSTQTLLQLFR 424
>gi|254496557|ref|ZP_05109425.1| flagellin [Legionella drancourtii LLAP12]
gi|254354181|gb|EET12848.1| flagellin [Legionella drancourtii LLAP12]
Length = 468
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 77/464 (16%), Positives = 141/464 (30%), Gaps = 16/464 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++ A + L + R+SSG R++ A D+AA +I +M + ++
Sbjct: 5 INTNIPSLLAQRNLSKTTDAMSTSIQRLSSGYRINSAQDDAAGMAIVTLMTAQIMGVNKA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S IA+ GM A D++ ++ D +++Q +++QL S++
Sbjct: 65 AQNANDAISLAQIAEGGMGTATDILQQMRTLAVQSANGTNSSADRQALQDQVSQLISEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
DIA + FNG++ L ++T I + + + + ++
Sbjct: 125 DIANNTQFNGQSILNGSFSNTTFQIGANANETTSFSIASIAASAIGNLASLTGGSVTATT 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT-------------ISTKKFKLATT 227
K S + + TT
Sbjct: 185 ASDITVSMGGTPGTKNIASSANYATTVNGQGAGSAYAKAAALNAANITGFTAQASTSGTT 244
Query: 228 SGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
T + S++ VA +
Sbjct: 245 GTVAFAGGAYDLTINGVTIFNGDDTSLTATTLADTINVASSQTGVVATLNSTATAITLTA 304
Query: 288 WVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT 347
+ T D T + G T + S L
Sbjct: 305 ADGRDITVTETGDTPLTAAGSFTSGTALNGNLTITANNTVFLGGTIANIGFTSSTILTDN 364
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
NT + + + ID+ + T +G++ +R ++ + D E
Sbjct: 365 VGINTLDITTQSGAQTAIQRIDSALSSITENRSAMGAMENRFDATIANLQNISDNSEAAR 424
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D D A+E L+ Q QQ LS N+ +LSL R
Sbjct: 425 SRIQDTDYAAEMANLTKNQILQQAGTAMLSQANSMPQSVLSLLR 468
>gi|222095383|ref|YP_002529443.1| flagellin [Bacillus cereus Q1]
gi|221239441|gb|ACM12151.1| flagellin [Bacillus cereus Q1]
Length = 494
Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats.
Identities = 69/492 (14%), Positives = 143/492 (29%), Gaps = 44/492 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ LS
Sbjct: 3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLSVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+D G S + A + M+ +++ +++ + ++Q E L+ Q+
Sbjct: 63 ADNTQNGMSLIRTADSAMNSVSNILLRMRDIANQSANGTNTDKNQVALQKEFAALKEQIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L + + ++ I D + + + +
Sbjct: 123 YIADNTQFNDKNLLNGNQTINIQTLDSHDSTKQIGIDLKSATLEALGIKDLTVGAVGSTE 182
Query: 181 TDGTERYGLLDRNH-----------------------------------------KIKVE 199
+
Sbjct: 183 AKNYVDAKEALAKNVAANEFIDAKKALDGNAIAKGYVEAKTAFDDAKPEVKALVSNYTDA 242
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
L D + TK A T A D A V +
Sbjct: 243 LAALAKDDTNDDLKKDVADTKALMDANTVAKTYFEAKTAHDGADQAIKDIVTTYDSKLGA 302
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ A +A ++ + N+ + +
Sbjct: 303 LDDAANKAISDFDKAKAAFDESPAAKELVKTMDDAKQAATQNNTANAYLVAKAAAELAPN 362
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + + +A + V ID +K
Sbjct: 363 DADKKAELENATKALEKDDTAKGLVKTYENAKEALNPANAMPLDAVKQIDAALKTVADNR 422
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G+ +R+ + +K A+ ++ DADMA E + ++ + + + LS
Sbjct: 423 ATLGATLNRLDFNVNNLKSQSSAMAASASQIEDADMAKEMSEMTKFKILNEAGISMLSQA 482
Query: 440 NNSTARILSLFR 451
N + + L +
Sbjct: 483 NQTPQMVSKLLQ 494
>gi|6706170|emb|CAB65959.1| flagellin [Escherichia coli]
gi|6706172|emb|CAB65960.1| flagellin [Escherichia coli]
Length = 456
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 65/457 (14%), Positives = 137/457 (29%), Gaps = 37/457 (8%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
L +L +R+SSGLR++ A D+AA +IA ++ L+ S G S
Sbjct: 1 NLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISVAQ 60
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ + + ++ SIQ+EITQ ++ ++ + FNG
Sbjct: 61 TTEGALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEIDRVSEQTQFNGVK 120
Query: 133 WLRTDLGSSTA---------------------------------SIAKSVIGSFIRDDNG 159
L + + +I F
Sbjct: 121 VLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATGSDLISKFKATGTD 180
Query: 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
+ Y ++ ++ + +T D + K + + + A+ +
Sbjct: 181 NYDVGGDAYTVNVDSGAVKDTTGNDIFVSAADGSLTTKSDTNIAGTGIDATALAAAAKNK 240
Query: 220 KKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ T +G A G+ + + + + + +
Sbjct: 241 AQNDKFTFNGVEFTTTTAADGNGNGVYSAEIDGKSVTFTVTDADKKASLITSETVYKNSA 300
Query: 280 IRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGY 339
+ + +A T + + + + V Y V + T+
Sbjct: 301 GLYTTTKVDNKAATLSDLDLNAAKKTGSTLVVNGATYDVSADGKTITE-TASGNNKVMYL 359
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
S N DA + + ID + +G++ +R +
Sbjct: 360 SKSEGGSPILVNEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGAVQNRFDSAITNLGNT 419
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
+ + R+ DAD A+E + +S Q QQ L
Sbjct: 420 VNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVL 456
>gi|30059864|gb|AAP13304.1| FliC [Escherichia coli]
Length = 456
Score = 186 bits (470), Expect = 9e-45, Method: Composition-based stats.
Identities = 64/457 (14%), Positives = 137/457 (29%), Gaps = 37/457 (8%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+L +R+SSGLR++ A D+AA +IA ++ L+ S G S
Sbjct: 1 NKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISVAQTT 60
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ +++ + + ++ SIQ+EITQ ++ ++ + FNG L
Sbjct: 61 EGALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEIDRVSEQTQFNGVKVL 120
Query: 135 RTDLGSSTA---------------------------------SIAKSVIGSFIRDDNGKV 161
+ + +I F
Sbjct: 121 AENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATGSDLISKFKATGTDNY 180
Query: 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKK 221
+ Y ++ ++ + +T D + K + + + A+ + +
Sbjct: 181 DVGGDAYTVNVDSGAVKDTTGNDIFVSAADGSLTTKSDTNIAGTGIDATALAAAAKNKAQ 240
Query: 222 FKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR 281
T +G A G+ + + + + + +
Sbjct: 241 NDKFTFNGVEFTTTTAADGNGNGVYSAEIDGKSVTFTVTDADKKASLITSETVYKNSAGL 300
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
+ + +A T + + + + V Y V + T+ S
Sbjct: 301 YTTTKVDNKAATLSDLDLNAAKKTGSTLVVNGATYDVSADGKTITE-TASGNNKVMYLSK 359
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
N DA + + ID + +G++ +R + +
Sbjct: 360 SEGGSPILVNEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGAVQNRFDSAITNLGNTVN 419
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+ R+ DAD A+E + +S Q QQ L+
Sbjct: 420 NLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQ 456
>gi|30059858|gb|AAP13301.1| FliC [Escherichia coli]
Length = 461
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 64/461 (13%), Positives = 127/461 (27%), Gaps = 40/461 (8%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+L +R+SSGLR++ A D+AA +IA ++ L+ S G S
Sbjct: 1 NKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISVAQTT 60
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ +++ + + I+ SIQ+EITQ ++ ++ + FNG L
Sbjct: 61 EGALNEINNNLQRIRELSVQATNGTNSDSDLSSIQAEITQRLEEIDRVSEQTQFNGVKVL 120
Query: 135 RTDLGSSTA---------------------------------SIAKSVIGSFIRDDNGKV 161
+ + +I F
Sbjct: 121 AENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATGSDLISKFKATGTDNY 180
Query: 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKK 221
+ Y ++ E+ + + + D + + +V + + A I
Sbjct: 181 DVGGKTYTVNVESGAVKNDANKDVFVSAADGSLTTSSDTKVSGESIDATELAKLAIKLAD 240
Query: 222 FKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR 281
G A G + + S ++ +
Sbjct: 241 KGSIEYKGITFTNNTGAELDANGKGVLTANIDGQDVQFTIDSNAPTGAGATITTDTAVYK 300
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI----DS 337
+ T N+ T + + D +
Sbjct: 301 NSAGQFTTTKVENKAATLSDLDLNAAKKTGSTLVVNGATYNVSADGKTVTDTTPGAPKVM 360
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
S N DA + + ID + +G++ +R +
Sbjct: 361 YLSKSEGGSPILVNEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGAVQNRFDSAITNLG 420
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+ + R+ DAD A+E + +S Q QQ L+
Sbjct: 421 NTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQ 461
>gi|229195972|ref|ZP_04322725.1| Flagellin [Bacillus cereus m1293]
gi|228587531|gb|EEK45596.1| Flagellin [Bacillus cereus m1293]
Length = 463
Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 69/463 (14%), Positives = 144/463 (31%), Gaps = 22/463 (4%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R+++A+D+AA +IA M++ L+ ++ G
Sbjct: 1 MRTQEYMRQNQTKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVAANNTQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + A + M+ +++ +++ + ++Q E +LQ Q+ IA +
Sbjct: 61 MSLIRTADSAMNSVSNILLRMRDIANQSANGTNTKDNQAALQKEFGELQKQITYIADNTQ 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
FN +N L + ++ S G I D + + +
Sbjct: 121 FNDKNLLNENSTVKIQTLDSSEAGQQIGIDLKATTLAALGIDKLTIGTATAPNVQTALDA 180
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
K + + + K + + ++
Sbjct: 181 KDALDAATETATATKDKIDTDAAAAPTSAAALAKTYIDAKEAVAKASDDSKDADLGAATR 240
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
P S + A + T++ Y N+
Sbjct: 241 ALTPDAKKLVEDYENKLHDASLKEAAYTKAFNAASSDVPAGSPVGTRSEQAIISAYANAK 300
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM-------------------VTLNITR 348
A + D E K+ + +TR
Sbjct: 301 DAIMKTPASETDPEKAARLIAKNYVTAKANFEKDPSAKGAFESAKNALEDNADAKTLVTR 360
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
+ N A + VS ID +K +G+ +R+ + +K ++
Sbjct: 361 YENAKAETSAGTPLDAVSKIDAALKTVADNRATLGATLNRLDFNVNNLKSQSASMASAAS 420
Query: 409 RLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ DADMA E + ++ + + + LS N + + L +
Sbjct: 421 QIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 463
>gi|21242719|ref|NP_642301.1| flagellin [Xanthomonas axonopodis pv. citri str. 306]
gi|21108194|gb|AAM36837.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 399
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 62/449 (13%), Positives = 121/449 (26%), Gaps = 53/449 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + ++ R+SSGLR++ A D+AA +I++ + L
Sbjct: 4 VINTNVMSLNAQRNLNTSSASMSTSIQRLSSGLRINSAKDDAAGLAISERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
S G S A+ M + + + I+ +
Sbjct: 64 ASRNANDGISLAQTAEGAMVEIGNNLQRIRELSVQSSNATNSAT-------------DRE 110
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A S + + T ++ +V V + +
Sbjct: 111 ALNSEVKQLTSEIDRVANQTNFNGTKLLDGSFSGALFQVGADAGQTIGINSIVDANVDSL 170
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
G + + I + T K AT ++
Sbjct: 171 GKANFAAAVSGAGVTGTATASGSITGISLAFNDASGTAKTVTIGDVKIANGDDAATINKK 230
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
A A TSG +S T + MG S T
Sbjct: 231 VASAINDKLDQTGMYASIDTSGNLKLESLKAGQDFTSLTMGTSSATGVTVGAGLQT---- 286
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
S + + + +
Sbjct: 287 ------------------------------------ASAASGSTAVTLTDLDISTFAGSQ 310
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ + +D + ++ +G++ +R + + + R+ D D A E+ L
Sbjct: 311 QALEIVDKALTAVNSSRADMGAVQNRFTSTIANLSATSENLSASRSRIRDTDYAKETAEL 370
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q QQ L+ + +LSL +
Sbjct: 371 TRTQILQQAGTAMLAQAKSVPQNVLSLLQ 399
>gi|325291954|ref|YP_004277818.1| flagellin protein FlaD [Agrobacterium sp. H13-3]
gi|45479288|gb|AAS66690.1| FlaD [Agrobacterium sp. H13-3]
gi|325059807|gb|ADY63498.1| flagellin protein FlaD [Agrobacterium sp. H13-3]
Length = 430
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 142/451 (31%), Positives = 204/451 (45%), Gaps = 21/451 (4%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AM+A Q LR I+ NLE Q RVSSG RV AADNAAYWSI+ M+SDN AL
Sbjct: 1 MTSILTNAAAMAALQTLRMIDKNLETTQARVSSGYRVETAADNAAYWSISTTMRSDNAAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG++KVD A ++ +I+V+ IK K+ A G D IQ EI QLQ QL+
Sbjct: 61 SAVQDALGLGAAKVDTAYDALANSIEVVKKIKEKLVAAYGVGADRGKIQDEIKQLQEQLK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ +SF+GENWL+ + + I + + + + +
Sbjct: 121 STSESASFSGENWLQASISNGGTPPVVEPITKKVVASFTRTGSGNVGVTTVDYVLDGSAV 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
L + + + I + A T +
Sbjct: 181 LFDLSGGKLGILDKSAVFVAKTEQQITQTSTTAGVTTNAGYV------------------ 222
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ AA T+ S + + + T
Sbjct: 223 ---VKKLTDAEIGTLNAATPDTNADPSVYSNGTVNYLRLSENTWVKVTATNPSSGTTTVA 279
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
Y ++ T ++D+ + T Y A
Sbjct: 280 AAYRDTGSNDWFYDTTGAPTSVARSLGLSVSTLDLDNLDVVAAAMSGFSGGTTNYTASDA 339
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ M+SF+D Q++ T+ A +GS+ SRI++QE+F+ + D ++KG+GRLVDADM EST
Sbjct: 340 IDVMMSFVDKQLEAMTSTASSLGSLQSRINMQENFVSTLMDVIDKGIGRLVDADMNEEST 399
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQTQQQL +QALSI N + IL LF+
Sbjct: 400 RLKALQTQQQLGIQALSIANANAQNILQLFK 430
>gi|313904119|ref|ZP_07837498.1| flagellin domain protein [Eubacterium cellulosolvens 6]
gi|313470921|gb|EFR66244.1| flagellin domain protein [Eubacterium cellulosolvens 6]
Length = 511
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 67/509 (13%), Positives = 140/509 (27%), Gaps = 60/509 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A +A + ++ L +++SSG R++ +AD+AA +I++ M++ L+
Sbjct: 3 IQHNIAAANAYRNMKSNRSGLSKNLEKLSSGYRINRSADDAAGLAISEEMRAKINGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ G + A M++ ++ T + +IQ E+ +L +++
Sbjct: 63 EMNVDDGIGLIQTADGAMTEVHAMLERGVTLTTQAANGTYNDVSRAAIQKELDELGAEID 122
Query: 121 DIARGSSFNGENWLRT--------------------DLGSSTASIAKSVIGSFIRDDNGK 160
I + FNG L+ + TA+
Sbjct: 123 RIYESTDFNGIKVLQGQHVTSQTSRLEIIGGLPEGVTFDNDTATQNYMASTWADPTSVSV 182
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ +++ + D T +
Sbjct: 183 DITYKYQDSQGNDQTATFTASVKQRYVSSEVDFTHYVPGATGAFNFTCCTCDNHYTANLV 242
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ N + G+ + G + + + I
Sbjct: 243 SGTQNSVEHQTDGDGNDHYIYNIGVDGATADDIIDKITTAMSKNPQGHYTKLEVSGSKLI 302
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
I + + + + + + N+ V T+ + E D
Sbjct: 303 IYDERAITNKTDIIDDLNNSSLNPSYNLNLTANSITKVVYHDTSNSLPMNSLSEFDRKRG 362
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDT--------------------QIKCATAAAG 380
V + R Y + + D Q+ AA
Sbjct: 363 KVNEGLARTTTDTEYAGTPDVVLQIGPTDKETLVVKLPRVSTETLKVDGVQVDTVPHAAT 422
Query: 381 KIGSISSRIH-----------------LQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ S I ++++ + + R+ D DMA E +
Sbjct: 423 AMESYQKAIDQLSLERARLGAYENRLEHTKNYLGIASENTTAAESRIRDTDMAKEMAAYT 482
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFRG 452
Q A L+ N S +LSL +G
Sbjct: 483 KNNILSQAAQSMLAQANQSGQAVLSLLQG 511
>gi|308273219|emb|CBX29822.1| hypothetical protein N47_F15170 [uncultured Desulfobacterium sp.]
Length = 482
Score = 184 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 79/480 (16%), Positives = 155/480 (32%), Gaps = 34/480 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + L+ + + R+SSG R+++AAD+AA +I+Q ++D +
Sbjct: 5 IQNNIAAMNAHKNLQISDSAMSKSLQRLSSGYRINNAADDAAGLAISQGFRADIASFKVA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S S+ + +A+ GM + ++++ +K T ++ I +E T L S++
Sbjct: 65 SRNTSEASAMLQVAEGGMDQIGNMLTRLKELATQAASANVGSSERTKINAEATALTSEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + + L G + + G V + + D S
Sbjct: 125 RIANSTKYGSTALLTGTFG--ASQTGALGAAAVANHVTGIVDDSADNVSYDFVDSGAGSI 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ L + + + ++SGT+S T T
Sbjct: 183 ATSVKVTALGAGVTEGTYTISQTAAGIIKIVNSSGTVSESYSGALTGDTLTFANLGITIT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ V A AA T +G S +++ + NS +
Sbjct: 243 VTGSTLDVAVGFSAGAAATTLTLNRTGLTSLNISQAKAGTYNITQTAAGVIGVTNSAGTA 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY----- 355
+ + + + E++ V N + N
Sbjct: 303 SQLLSFQSSDTTLDFNVLGISFKLGAGFSNTTMELNGMQMTVAANTSAAGNVFQVGAQNN 362
Query: 356 ------------------------NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ + + ID+ + + G +G+ +R+
Sbjct: 363 SDNQISLAIGGVRTASLGLTGLDLSTATGAQTALDTIDSAVSTLSGLRGDVGASMNRLSY 422
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + + D DMASE T + Q Q L+ N + ILSL +
Sbjct: 423 AAANLATTIENTQAAESVIRDVDMASEMTDFTKNQILLQAGTAMLAQANMAPQGILSLLK 482
>gi|85712263|ref|ZP_01043314.1| Flagellin [Idiomarina baltica OS145]
gi|85693890|gb|EAQ31837.1| Flagellin [Idiomarina baltica OS145]
Length = 395
Score = 183 bits (463), Expect = 5e-44, Method: Composition-based stats.
Identities = 57/447 (12%), Positives = 122/447 (27%), Gaps = 57/447 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN S+++A +L +L+ R+SSGLR++ AAD+AA I+ + S L+
Sbjct: 5 VNTNVSSINAQNQLVKSGNSLDQAFQRLSSGLRINSAADDAAGLQISNRLTSQVNGLNVA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ G S A+ + ++ +++ ++ + ++ L ++ +
Sbjct: 65 TRNANDGISLAQTAEGSLQESTNILQRMRELALQSANG----SNSSADRQALNKEIGALK 120
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ +N S + + V T
Sbjct: 121 SELTRISDNTAFGGSKILDGSFGTKEFQIGSEANETISLTLDDYDASNLGGVGAKGKTVT 180
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ +
Sbjct: 181 DAFDATVLGDA------------------------------------------------- 191
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A + T+ S + + A ++ + +
Sbjct: 192 ----AETLTYAITDSDGNTNSFEVSIAAGDGSDALIEKVNAKANEFGVYAVDDGSGGVDL 247
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
S + S+ D+ + + +
Sbjct: 248 EASNSVTAITVDSDLGANSSYGDASSAPISLSIGAADSLASPKAGGVESIDVLSVENAQT 307
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
V ID I + +G+ +R+ + + + V R+ DAD A+E+ +L+
Sbjct: 308 AVGVIDQAIADIDSKRADLGAFQNRMQSTISNLSTISENVSAARSRVRDADFAAETAKLT 367
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLF 450
Q QQ + L+ N LSL
Sbjct: 368 QAQIIQQASTTILAQANQRPQAALSLL 394
>gi|315122277|ref|YP_004062766.1| flagellin domain-containing protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495679|gb|ADR52278.1| flagellin domain-containing protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 457
Score = 183 bits (463), Expect = 5e-44, Method: Composition-based stats.
Identities = 230/457 (50%), Positives = 298/457 (65%), Gaps = 5/457 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN AMSASQKLR INYNLEVVQDRVSSGLRV+D++DNAAYWSIA++MKSDN AL
Sbjct: 1 MTSILTNLPAMSASQKLRAINYNLEVVQDRVSSGLRVADSSDNAAYWSIAKMMKSDNAAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDAIGLGSSKVDIAKAGM ++I V+S+IK K+ A E GTD+ S+Q+EI+QLQ QL
Sbjct: 61 SAVSDAIGLGSSKVDIAKAGMDESIKVLSSIKEKLVAATEHGTDAHSVQAEISQLQQQLG 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
DIA+GSSFNGENWLR L + ++SI+KSV+ SFIRD++G+VQ+TTIDY LD T+L D+S
Sbjct: 121 DIAQGSSFNGENWLRASLVTPSSSISKSVVSSFIRDESGQVQVTTIDYNLDSNTLLFDTS 180
Query: 181 TDGT-----ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
G ++ + + E ++ + +
Sbjct: 181 GQGGRYGLLDKKHQISVQPQKMSEIEISYLDSNAKLQTIKKDLATASGAWLKAAGATFNQ 240
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
+ + + + +S +S K + + +D ++T +
Sbjct: 241 EKGVAILPKNPVVSPSSSPSFPSSSPSSPSSQDKIIYIRVGNQDQWVKGTDSGDYSSTLS 300
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
S + + + Y S + + + +D YS+VTL+IT+H+N Y
Sbjct: 301 SDSKSSSPKKAVAVTQYDDKSYYIDASAVTLDNRKVEQTMDLDYSIVTLDITKHSNDSMY 360
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
NE M+EM+SFID ++K T+AAGKIGSISSRIHLQEDF+K MRDAVEKG+GRLVDADM
Sbjct: 361 NEATTMKEMLSFIDQKLKLVTSAAGKIGSISSRIHLQEDFVKFMRDAVEKGIGRLVDADM 420
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
A ES++LSALQTQQQLA+QALSIVNNSTA+ILSLFRG
Sbjct: 421 ADESSKLSALQTQQQLAIQALSIVNNSTAKILSLFRG 457
>gi|227326892|ref|ZP_03830916.1| putative flagellin [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 484
Score = 183 bits (462), Expect = 7e-44, Method: Composition-based stats.
Identities = 70/476 (14%), Positives = 149/476 (31%), Gaps = 34/476 (7%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++ + L +R+SSGLR++ A D+AA +IA M ++ A S +++ + G
Sbjct: 9 LTIRNQQDKSATRLSQAIERLSSGLRINGAKDDAAGQAIANRMTANLNANSVITNGMKDG 68
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSS 127
S + A++G++ +++ + TD S+ E Q++ ++ IA +
Sbjct: 69 LSLMQTAESGLNAINNLIQRGRQLAVQAANGTLSDTDQASLNGEYQQIREEIDRIASSTQ 128
Query: 128 -FNGENWLRTDLGSSTASIAK--------SVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
F + G A + + V + +G + + I T+ +D
Sbjct: 129 IFGRYPLAPAEPGPQPAKLGETLPLAEKFPVPNINHQFPSGVISLAYIPAGTKNITITID 188
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL------ 232
S + + + P D D+ + + T
Sbjct: 189 SLSADDDIQLFARDGRHLAGTPAEGADADIVWSANGVSDESTMNTAVITQDNGFLPGATY 248
Query: 233 ----------KAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
N TI T G + +
Sbjct: 249 SADSLLQAGEYNINTGAQTTYQGMTITYSGDGDRFEDANTGGFNDGNVGAANRLEKIHID 308
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
++ + + + + + + ++ + V
Sbjct: 309 EVTEDLIVIVVGSGVFYSNANWDELPTPTEPAPPLPTSVPISKETTFVVGASFGDALQTV 368
Query: 343 TLNITRHANT------DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
T+N T + + ++ D +K + GS +R +
Sbjct: 369 TINPTPADSQSLGLSSVTLSTPEQASAALATFDNALKTLDGYRSEYGSQMNRFESVTAVL 428
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ A+ R++DAD A E + ++ Q QQ ++ LS N + +L L +G
Sbjct: 429 SQEKVAISAARSRILDADYAIEVSAMTKAQILQQASIAVLSHANQQSGNVLKLLQG 484
>gi|163750562|ref|ZP_02157800.1| flagellin type B [Shewanella benthica KT99]
gi|161329717|gb|EDQ00706.1| flagellin type B [Shewanella benthica KT99]
Length = 481
Score = 183 bits (462), Expect = 7e-44, Method: Composition-based stats.
Identities = 75/477 (15%), Positives = 146/477 (30%), Gaps = 29/477 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN ++M L NL +R++SG+R++ A D+AA I+ M S +
Sbjct: 4 SVNTNVTSMKTQSSLNRAQSNLSTSMERLASGMRINSAKDDAAGLQISNRMTSQINGIGV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M ++ +++ +++ D ++Q EI LQS+L
Sbjct: 64 AMRNANDGISIAQTAEGAMGESTNILQRMRDLSLQSANGSNSSEDRAAMQKEINSLQSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G+ L G+ + + + Y D L
Sbjct: 124 TRIAETTSFGGQKLLDGSYGTQSFQVGSEANETIDISLRSIAATNIGAYQSDAAGSLFGE 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK---------------- 223
+ + V+V + + T
Sbjct: 184 DLVAAAAGTNGSAGGTMTITKGTSTTNVVTVANDTATEVAAAINQAGTGVKATAETNIEA 243
Query: 224 ----------LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ +A + T +G+ + +
Sbjct: 244 NLTAAYDVSLVMNVDDGTSTSAVDLTGITNNKDLAAAINDVSGETGVTAKIDNGTLTITS 303
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ A + T N +T+A G T + + + +
Sbjct: 304 STGADINFTEAGNGSGGMTLINKAADGTASATTTMANAGTTFVAAGAITLSSPAGFTVAA 363
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
I + + + NT + ++ ID I ++ +G++ +R+
Sbjct: 364 GISAEITTEATGVFAGVNTVDIGTASGAQNAIAIIDGAIAGIDSSRADLGAVQNRMSFTI 423
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ +R V R+ D D A E+ ++ Q Q + L+ N LSL
Sbjct: 424 SNLDNVRSNVTDARSRIQDVDFAKETAEMTKQQILSQTSSAMLAQANQLPQVALSLL 480
>gi|260888404|ref|ZP_05899667.1| flagellin [Selenomonas sputigena ATCC 35185]
gi|260861940|gb|EEX76440.1| flagellin [Selenomonas sputigena ATCC 35185]
Length = 488
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 59/453 (13%), Positives = 131/453 (28%), Gaps = 6/453 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ N A + L + +VSSG++++ A D+ + SI++ M+ AL
Sbjct: 39 LVVKNNMQAANTLNTLNKNEKDRAKSLAQVSSGMKITSAGDDPSGMSISERMRVQIRALD 98
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQ 118
+ G+S + +A+ ++ ++++ T+K K D +IQ E+ + Q
Sbjct: 99 QDNQNTQNGNSMMKVAEGAVASTVEILRTLKEKCINAANDTNTDDDRATIQKEMDAMVDQ 158
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ D A T + + + G T
Sbjct: 159 INDNANIQYNGKILMSGTYNNQVSVAGGTQSTWANQAFAEGTNPSGTALTNYKDRNGNSL 218
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ K + + + +++ + T T KF
Sbjct: 219 GILPTDRMTVSYVKDGKTYEKTFRVGNFNLTACFTNTTSGTGKFVPDPGDTDLEAYQGPA 278
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ + A + +N++
Sbjct: 279 PNGLSKVGIDQYGHDVVTADGKDALTIRAKNGGTTGQIGGVTFCLTDSQGNIKKAQNNMF 338
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
T + + + + K ++ + + + +
Sbjct: 339 DKFQMTVRAQDPTPDNAMVFQIGTRSNQAVKVGFTDMH---AKALGMMGSDSKAIQVTTR 395
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
V+ I+ I +G+ +R+ I + + + DADMA
Sbjct: 396 ARANAAVNVIENAIGMCLDQQTVLGAAQARLQFTSSNIITASENTQYAESTIRDADMAKA 455
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
T + Q A L+ N S++ +LSL +
Sbjct: 456 MTDYTKSNILTQTAQAMLAQANQSSSGVLSLLQ 488
>gi|46909844|gb|AAT06390.1| flagellin [Citrobacter freundii]
Length = 460
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 67/458 (14%), Positives = 129/458 (28%), Gaps = 37/458 (8%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDI 76
+ L +R+SSGLR++ A D+AA +IA S+ L+ S G S
Sbjct: 1 MNKSQSTLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQT 60
Query: 77 AKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
+ +++ + + ++ G+D SIQ+EITQ S++ ++ + FNG
Sbjct: 61 TEGALNEINNNLQRVRELSVQAANGSKSGSDLDSIQAEITQRLSEIDRVSGQTQFNGVKV 120
Query: 134 LRTDLGSSTASIAKSVIGSFIR-------------------------------DDNGKVQ 162
L D A I G
Sbjct: 121 LAQDNTLKIQVGANDNESISINLKEITSGTLGLNGFRVTGDKAATSDQLVKDFGATGTKD 180
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
V + Y I + A ++
Sbjct: 181 YKLGTTDYKVNVVTGGVKAGADDVYVGASSGALITDATNTAISGGTTTGCAVAVLAKDVT 240
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
+ T + + A G + + + + T+ + + +
Sbjct: 241 QGNTFTWKGTTWKANSDTDANGNGSFTANIDGKDITLSISGSTATDGTGANMTISGGALY 300
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
T + + ++ K T + + +
Sbjct: 301 EQGTTASNKLTTHGTNAAAKESDLVQQKASLTGGDLKVGAVDYKVDSAGNVFNAGATQQI 360
Query: 343 TLNITRHANTDAYNEKLAMEEM---VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
+ AN + A E + +D I G +G++ +R +
Sbjct: 361 FVQNAGTANAKLVEQDKASEATRNQLDVLDKAISQVDTLRGDLGAVQNRFDSTITNLGNT 420
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+ + R+ DAD A+E + +S Q QQ L+
Sbjct: 421 VNNLTSARSRIEDADYATEVSNMSKAQILQQAGTSVLA 458
>gi|149194794|ref|ZP_01871888.1| flagellin [Caminibacter mediatlanticus TB-2]
gi|149134953|gb|EDM23435.1| flagellin [Caminibacter mediatlanticus TB-2]
Length = 496
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 68/492 (13%), Positives = 150/492 (30%), Gaps = 44/492 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A ++ N NL +++S+GLR++ AAD+A+ IA +++ +L
Sbjct: 5 INTNVAALNAHAAMQITNRNLNNSLEKLSTGLRINKAADDASGLQIADSLRNQADSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ IA M + + +++TIK K T + K++Q +I +L +L
Sbjct: 65 IRNANDAIGVMQIADKAMDEQVKILNTIKVKATQAAQDGQTSETRKALQEDIVRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +++NG++ L + I + + + V+ +
Sbjct: 125 NIAGTTTYNGKSLLSGSFTNQEFQIGAYSNQTVKASIGATSSDKIGNTRFETGKVMTAAG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + ++ + + I+ K + + +
Sbjct: 185 EVSLKFVNVDGVHDVQLESVKISTSAGTGIGVLAEVINKNSDKTGVKASWQVIQTGSAEI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSK------------------------------- 269
Q I + + S K
Sbjct: 245 QGGDITGLTINGVKIGDVLGVQKDDSDGKLVAAINAVKDQTGVEAYVDERGVLNLRSLDG 304
Query: 270 ----------SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ SA + R ++ S YT +
Sbjct: 305 RGIKVSGTGLDTAAGMSAAAVENYGRLTLTRLDARDIQISGTNYTLTGFNNSAAEAQATI 364
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
T + ++ + ++ D+ +
Sbjct: 365 NLRTIKGNFSADQASAIGAFANANVANFGQEIGAGVTTLKGAMAVMDIADSAQRMLDKIR 424
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
IGS+ +++ + I + + V+ ++ D D A+E+ Q ALS
Sbjct: 425 ADIGSVQNQLVSTINNISVTQVNVKAAESQIRDVDFAAETANFQKYNLLAQSGSYALSQA 484
Query: 440 NNSTARILSLFR 451
N ++ L +
Sbjct: 485 NAVQKNVMKLLQ 496
>gi|159184370|ref|NP_353593.2| flagellin protein FlaD [Agrobacterium tumefaciens str. C58]
gi|2459700|gb|AAB71776.1| FlaD [Agrobacterium tumefaciens]
gi|159139683|gb|AAK86378.2| flagellin protein FlaD [Agrobacterium tumefaciens str. C58]
Length = 430
Score = 181 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 143/451 (31%), Positives = 199/451 (44%), Gaps = 21/451 (4%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AM+A Q LR I+ NLE Q RVSSG RV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNAAAMAALQTLRMIDKNLETTQARVSSGFRVETAADNAAYWSIATTMRSDNSAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG++KVD A + I+V+ IK K+ A G D IQ EI QLQ QL+
Sbjct: 61 SAVQDALGLGAAKVDTAYDALESTIEVVKQIKAKLVAAYGVGADRGKIQDEIKQLQEQLK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ +SF+GENWL+ + T + V+ +
Sbjct: 121 SISESASFSGENWLQASIS---------------------NSGTPPVAESITKKVVASFT 159
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G+ G+ ++ + + + A +
Sbjct: 160 RTGSGNVGVTTVDYTLDSSTVLFDLSGGKLGILDKNAVFVSKTETEVMQTSTTAGKTSQA 219
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ A A T+ S + T
Sbjct: 220 GYVVEKLSDAQIGALNATTTDTNTDPNLYSNGTDNYLRLAENVWVKATATNPSSGGTTVS 279
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
P Y ++ + ++ + + Y A
Sbjct: 280 PAYRDTGSTDWFYDVSAGTASANRSLGFSVSTLDLGNLDVVAAAMGGFAGGGTTYTGADA 339
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ M+SF+D Q++ T+ A +GS+ SRI +QE+F+ + D ++KGVGRLVDADM EST
Sbjct: 340 IDMMMSFVDKQLEAMTSTASSLGSLQSRISMQENFVSSLMDVIDKGVGRLVDADMNEEST 399
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQTQQQL +QALSI N + IL LF+
Sbjct: 400 RLKALQTQQQLGIQALSIANANAENILQLFK 430
>gi|89100623|ref|ZP_01173481.1| flagellin [Bacillus sp. NRRL B-14911]
gi|89084647|gb|EAR63790.1| flagellin [Bacillus sp. NRRL B-14911]
Length = 407
Score = 181 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 58/416 (13%), Positives = 117/416 (28%), Gaps = 29/416 (6%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++L N +++SSGL ++ A DNAA +I++ M+ L
Sbjct: 15 INHNIAALNTYRQLNSANNAQGKSMEKLSSGLSINKAGDNAAGLAISEKMRGQIRGLDQA 74
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+ +++ D++ ++ GTD IQ EI QL S++
Sbjct: 75 GKNAQDSISMIQTAEGALNETHDILQRMRELAVQAGNDTNTGTDRGEIQKEINQLTSEIN 134
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN + L G+ T ++
Sbjct: 135 RIGNTTEFNNQKLLNASAGTVTPGAPAGAGTPAGPGTPAVPATVFAAGTDMTADGTPTAA 194
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D + + + T++ F + A
Sbjct: 195 NDVKISGTFTGTADESVTFEKTATGWSIDGGLNDVTLAGDTFAYKGLTFDVSAAKADAAT 254
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
++ + A P P + S + +
Sbjct: 255 GDSWTESLTAAVAAGPGTPAVPGTPATGAKSSFSTQIGANENQTMTLEFEDMR------- 307
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ L + N T + +
Sbjct: 308 -------------------AAALGLTGTAATTGFTGTDTVTDGTNNTTNEAALDVSTAAN 348
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
V+ I+ I+ +A K+G+ +R+ + + + + R+ D D A
Sbjct: 349 AGNAVTKINAAIEKVSAERSKLGANQNRLEHTINNLNTSSENLTAAESRIRDVDYA 404
>gi|30059880|gb|AAP13312.1| FliC [Escherichia coli]
Length = 460
Score = 181 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 66/460 (14%), Positives = 129/460 (28%), Gaps = 39/460 (8%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+L +R+SSGLR++ A D+AA +IA ++ L+ S G S
Sbjct: 1 NKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISVAQTT 60
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ +++ + + I+ SIQ+EITQ ++ ++ + FNG L
Sbjct: 61 EGALNEINNNLQRIRELSVQATNGTNSDSDLSSIQAEITQRLEEIDRVSEQTQFNGVKVL 120
Query: 135 RTDLGSSTASIAKSVIGSFIR-------------------------------DDNGKVQI 163
+ A I G
Sbjct: 121 AENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATGSDLISKFKATGTDNY 180
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
V D + + + + A +
Sbjct: 181 QINGTDNYTVNVDSGVVQDKDGKQVYVSTADGSLTTSSDTQFKIDATKLAVAAKDLAQGN 240
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
G AKG + + + T S + + A T +
Sbjct: 241 KIVYEGIEFTNTGTVAIDAKGNGKLTANVDGKAVEFTISGSTDTSGTSATVAPTTALYKN 300
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
++ +N + + K G+T K + + ++
Sbjct: 301 SAGQLTATKVENKAATLSDLDLNAAKKTGSTLVVNGATYDVSADGKTITETASGNNKVMY 360
Query: 344 LNITRHANTDAYNEK-----LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
L+ + + NE + + ID + +G++ +R +
Sbjct: 361 LSKSEGGSPILVNEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGAVQNRFDSAITNLGN 420
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+ + R+ DAD A+E + +S Q QQ L+
Sbjct: 421 TVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQ 460
>gi|77918423|ref|YP_356238.1| flagellin [Pelobacter carbinolicus DSM 2380]
gi|77544506|gb|ABA88068.1| flagellin [Pelobacter carbinolicus DSM 2380]
Length = 491
Score = 181 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 57/487 (11%), Positives = 133/487 (27%), Gaps = 38/487 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN A L N + R+SSGLR++ A D+ A + + ++++ + +
Sbjct: 4 VINTNPLAQIVQNNLGKTNKSQADAMRRLSSGLRINSAKDDPAGLAKSNRVQTEIRSQNK 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQL 119
V + + G A A + + +++ + +D +S+ E Q++ Q+
Sbjct: 64 VIENLNQGVGYAQFADATLEEIGNLIQRGRELAVQAANSTLSDSDRQSLNEEFGQIKEQI 123
Query: 120 RDIARGSSFNGENWLRTDLGSST-----------------------------------AS 144
+A+ SS G+ L D ++
Sbjct: 124 DQLAQTSSMFGQYPLGGDSSNTAVVPSLGEVFSETSTAGGITSGITLIDPDLSPIAKIPQ 183
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
A +V+ + G ID + T + + + + +
Sbjct: 184 GATNVMVDVAPEWLGNPYQPDIDIQVFTVDGKHLVGTGLGDFTWESNGVNNAQDMNTLFI 243
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ T + + + + +
Sbjct: 244 SESNGFASGAAYDPTNLLFVDHLGMGAFANTGSYGGMNFTYSGDGDSFESIAPGGDPEIN 303
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
S T + + T T
Sbjct: 304 NGIVFSTQAREQFTVDEATEDLLVFAHGAGQVRLIAEWSNMPEPSSGQATQTIPQTMKIL 363
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
++ + + + + A E ++ + ++ G+
Sbjct: 364 ANTTANSDSDYIDIQKTPADLAALGLESVVIDPPEAAEIALTKLAEALQIMDNHRSYYGA 423
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
+ + + R+A + R++DAD ++E + L+ QQ ++ N+
Sbjct: 424 TMTSLEGRISATAAGREANSASLSRILDADFSTEVSELTKADVLQQAGASIMAQANSLPQ 483
Query: 445 RILSLFR 451
L L +
Sbjct: 484 ISLELLK 490
>gi|304317606|ref|YP_003852751.1| flagellin domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779108|gb|ADL69667.1| flagellin domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 423
Score = 180 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 68/437 (15%), Positives = 135/437 (30%), Gaps = 23/437 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN SA++A + L N N + ++SSG R++ AAD+AA +I++ MK+ L+
Sbjct: 2 VINTNLSAINAWRALETNNTNTQKALQKLSSGYRINSAADDAAGLAISEKMKAQIAGLNM 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S + A+ +++ ++ + TD +IQ E+ QL ++
Sbjct: 62 AQRNAQDGISLIQTAEGALNETQSILQRMNELAIQSANGANTATDRAAIQKEMDQLAQEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I + + FN + L S A + D
Sbjct: 122 GRIGQTTEFNTQKLLDGSFKSVFQIGANENQNLSLNIS--------------------DM 161
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G + + + S ++GT + ++ + +
Sbjct: 162 RGVALGIVGNTSASGVSSITTTLTSASTNSATFSNGTYTISFDSSSSIYDLLNSSGSIVG 221
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A G T ++ + + +S +
Sbjct: 222 VSADGKTWNAGTSVTTTGVDTFTLSSTITAGTVTISGTDTNVTVSSTELFNVQSSKLDAG 281
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
Y ST ++ V T + + + + T + +
Sbjct: 282 TYTYDASTKQLKNSSGDVVATTTDGKTFTDSQGNTVLTLANSANNGATFTVGGIDVSTQS 341
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A ++ I I + K+G+ +R+ + + + + R+ D DMA E
Sbjct: 342 AANSAITKIQDAINQVSMERSKLGAYQNRLEHTINNLGTASENLTAANSRIRDVDMAQEM 401
Query: 420 TRLSALQTQQQLAVQAL 436
+ Q A L
Sbjct: 402 MEFTKDNILNQAATAML 418
>gi|227112471|ref|ZP_03826127.1| putative flagellin [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 463
Score = 180 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 70/463 (15%), Positives = 142/463 (30%), Gaps = 34/463 (7%)
Query: 24 LEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSK 83
+ +R+SSGLR++ A D+AA +IA M ++ A S +++ + G S + A++G++
Sbjct: 1 MSQAIERLSSGLRINSAKDDAAGQAIANRMTANLNANSVITNGMKDGLSLMQTAESGLNA 60
Query: 84 AIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSS-FNGENWLRTDLG 139
+++ + TD S+ E Q++ ++ IA + F + G
Sbjct: 61 INNLLQRGRQLAVQAANGTLSDTDQTSLNGEYQQIREEIDRIASSTQIFGRYPLAPAEPG 120
Query: 140 SSTASIAK--------SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
A + V + +G + + I T+ +DS + +
Sbjct: 121 PLPAKLGDTLPLAEKFPVPNINHQFPSGVISLAYIPAGAKNITITIDSLSADDDIQLFAR 180
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF------------ 239
+ P D D+ T T
Sbjct: 181 DGRHLAGTPAEGADADIVWSANGVTDENTMNTAVITQDNGFLPHATYSADSLLQAGEYNI 240
Query: 240 ----DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
TI T G + + ++ + +
Sbjct: 241 NIGAQTTYQGMTITYSGDGDRFEDANTGGFNDGNVGAANRLEKIHIDEVTEDLIVIVVGS 300
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANT--- 352
+ + + + + ++ + VTLN T +
Sbjct: 301 GVFNSSASWDELPTPTEPAPPLPPSVPISKETTFVVGASFGDALQTVTLNPTPADSQSLG 360
Query: 353 ---DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
++ D +K + GS +R + + A R
Sbjct: 361 LSSVTLGTPQQASAALTTFDNALKTLDGYRSEYGSQMNRFESVTAVLSQEKVATAAARSR 420
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
++DAD A E + ++ Q QQ ++ LS N + +L L +G
Sbjct: 421 ILDADYALEVSAMTKAQILQQASMAVLSQANQQSGNVLKLLQG 463
>gi|224373627|ref|YP_002607999.1| flagellin [Nautilia profundicola AmH]
gi|223588565|gb|ACM92301.1| flagellin [Nautilia profundicola AmH]
Length = 489
Score = 180 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 69/485 (14%), Positives = 148/485 (30%), Gaps = 37/485 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A N NL +++S+GLR++ AAD+A+ IA ++ +L
Sbjct: 5 INTNVAALNAHAAGMVNNRNLNSSLEKLSTGLRINKAADDASGLQIADALRDQADSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ IA M + + +++TIK K T + G K++Q +I +L +L
Sbjct: 65 IRNANDAIGVMQIADKAMDEQVKILNTIKVKATQAAQDGQSADSRKALQEDIVRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +S+NG++ L + I + + + V+ +S
Sbjct: 125 NIAGTTSYNGKSLLSGQFTNQKFQIGAYSNETVTASIGATSSDKIGNTRFETGAVITAAS 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + V + + I+ K + + ++
Sbjct: 185 NVSLTFKSVDGVHDVSLESVVVSTSAGTGIGVLAEVINKNSDKTGVKATWQVLQTGSSAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + + + S K + + + + R
Sbjct: 245 SGGDVKGLVINGVTIGDVLDVKANDSDGKLVAAINAVKDQTGVEAYVDERGNLNLRSLDG 304
Query: 301 PGYTNSTVAKVGNTHYYVDTES----------------------------------TTLD 326
G + + N E+
Sbjct: 305 RGISVDVASGAANIGITSHVENYGRLTLTRLDARDIIVSGTGAGLSASAEATINLRAIKG 364
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ ++ + ++ D+ K G IGS+
Sbjct: 365 NFTADQASAIGAFANSLVANFGQKIGAGVTSLRGAMAVMDIADSAAKLLDKIRGDIGSVQ 424
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+++ + I + + V+ ++ D D A E+ Q ALS N +
Sbjct: 425 NQLVSTINNISVTQVNVKAAESQIRDVDFAQETANFQKYNLLAQSGSYALSQANAVQQNV 484
Query: 447 LSLFR 451
+ L +
Sbjct: 485 MRLLQ 489
>gi|15964424|ref|NP_384777.1| flagellin D protein [Sinorhizobium meliloti 1021]
gi|307311566|ref|ZP_07591207.1| flagellin domain protein [Sinorhizobium meliloti BL225C]
gi|17366268|sp|P58330|FLAD1_RHIME RecName: Full=Flagellin D
gi|15073601|emb|CAC45243.1| Flagellin D [Sinorhizobium meliloti 1021]
gi|306899583|gb|EFN30212.1| flagellin domain protein [Sinorhizobium meliloti BL225C]
Length = 401
Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats.
Identities = 137/451 (30%), Positives = 193/451 (42%), Gaps = 51/451 (11%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AM+A Q LR I+ N+E Q RVSSGLRV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNVAAMAALQTLRGIDSNMEETQARVSSGLRVGTASDNAAYWSIATTMRSDNMAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG++KVD A AGM A++V+ I+ K+ A E G D IQ EI QL+ QL
Sbjct: 61 SAVQDALGLGAAKVDTAYAGMENAVEVVKEIRAKLVAATEDGVDKAKIQEEIEQLKQQLT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SF+GENWL+ D+ + I + + +
Sbjct: 121 SIATAASFSGENWLQADITTPVTKSVVGSFVRDSSGVVSVKTIDYVLDGNSVLFDTVGDA 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ Y + + + V A + S
Sbjct: 181 GILDKIYNVSQASVTLPVNVNGTTTEYTVAAYAVDELIAAGATFDGDSANVTGYTVPAGG 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ V A +G
Sbjct: 241 IDYNGNFVKVEGTWVRAIDVAATGQEVVYDDGT--------------------------- 273
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
D ++V + + +
Sbjct: 274 ------------------------TKWGVDTTVAGAPAINVVAPASIENIDITNAAQAAN 309
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ++ +D ++ +A +GSIS RI +QE+F+ + D+++ G+GRLVDADM EST
Sbjct: 310 LDALIRGVDEALEDLISATSALGSISMRIGMQEEFVSKLTDSIDSGIGRLVDADMNEEST 369
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQTQQQLA+Q+LSI N ++ IL LFR
Sbjct: 370 RLKALQTQQQLAIQSLSIANTNSENILQLFR 400
>gi|40353145|emb|CAD99230.1| flagellin [Escherichia coli]
Length = 464
Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats.
Identities = 64/461 (13%), Positives = 128/461 (27%), Gaps = 40/461 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + I+ SIQ+EITQ ++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRIRELSVQATNGTNSDSDLSSIQAEITQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTA---------------------------------SIA 146
++ + FNG L + +
Sbjct: 124 DRVSEQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATG 183
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+I F + Y ++ E+ + + + D + + +V +
Sbjct: 184 SDLISKFKATGTDNYDVGGKTYTVNVESGAVKNDANKDVFVSAADGSLTTSSDTKVSGES 243
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ A I G A G + + S
Sbjct: 244 IDATELAKLAIKLADKGSIEYKGITFTNNTGAELDANGKGVLTANIDGQDVQFTIDSNAP 303
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
++ + + T N+ T + + D
Sbjct: 304 TGAGATITTDTAVYKNSAGQFTTTKVENKAATLSDLDLNAAKKTGSTLVVNGATYNVSAD 363
Query: 327 SRKDLPKEI----DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKI 382
+ S N DA + + ID + +
Sbjct: 364 GKTVTDTTPGAPKVMYLSKSEGGSPILVNEDAAKSLQSTTNPLETIDKALAKVDNLRSDL 423
Query: 383 GSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
G++ +R + + + R+ DAD A+E + +S
Sbjct: 424 GAVQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMS 464
>gi|86211134|gb|ABC87264.1| flagellin [Xanthomonas campestris pv. campestris]
Length = 399
Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats.
Identities = 58/449 (12%), Positives = 122/449 (27%), Gaps = 53/449 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + +++ R+SSGLR++ A D+AA +I++ + L
Sbjct: 4 VINTNVMSLNAQRNLNTSSASMQTSIQRLSSGLRINSAKDDAAGLAISERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
S G S A+ M + + I + S
Sbjct: 64 ASRNANDGISLAQTAEGAMVEIGSNLQRI-------------RELSVQSSNATNSASDRD 110
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A S + + T ++ +V V + +
Sbjct: 111 ALNSEVKQLTAEIDRVANQTNFNGTKLLNGDFSGALFQVGADAGQTIGINSIVDANVDSL 170
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
G + + + + + + K A ++
Sbjct: 171 GKTNFAAAVSGAGVTGTATASGSVTGISLSFNDSTGSAKSVTIADVKVGAGDTAADVNKK 230
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
A A GT +S T + G S
Sbjct: 231 VAAAINDKLDQTGMYASIKADGTMQIESLKAGQDFTSLSAGTSSAAGI------------ 278
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
+ S + + ++ + +
Sbjct: 279 ----------------------------TVGAGLTTASAASGSTASTPSSLDISTFSGSQ 310
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ + +D + ++ +G++ +R + + + R+ DAD A E+ L
Sbjct: 311 KALEIVDKALTAVNSSRADMGAVQNRFTSTIANLSATSENLSASRSRIRDADYAKETAEL 370
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q QQ L+ + +LSL +
Sbjct: 371 TRTQILQQAGTAMLAQAKSVPQNVLSLLQ 399
>gi|290918477|gb|ADD70086.1| FliC [Escherichia coli]
Length = 415
Score = 179 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 60/426 (14%), Positives = 119/426 (27%), Gaps = 19/426 (4%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ L +R+SSGLR++ A D+AA +IA S+ L+ + G S
Sbjct: 3 QNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISL 62
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ +S+ + + ++ +D SIQ EI ++ ++ + FNG
Sbjct: 63 AQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEIDRVSGQTQFNG 122
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
N L D A G + D K+ + + + D
Sbjct: 123 VNVLAKDGSMKIQVGAN--DGQTVSIDLQKIDSSALGLKGFSVSGNALKVGDAITSIPGA 180
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
I + + + G A++
Sbjct: 181 TAPVAIDFGDATVAGSIAKTLGVTDNSGLSLHNILDKVGKATNTYVIQSGSNSYSASVTA 240
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
N T + + + I++ + + D
Sbjct: 241 GGTVTLNTTNVTYDDPANGVTAAKQTGQPIKVTTNSNGEAVGYVSVQGKDY--------- 291
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
T + I + + A + ++ +D
Sbjct: 292 -----LAGVTGTGKDAVANGQTAAIATTLRVSDDPADATKLATTTFTGTATSDPLALLDK 346
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
I +G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 347 AIASVDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQ 406
Query: 431 LAVQAL 436
L
Sbjct: 407 AGNSVL 412
>gi|154250151|ref|YP_001410976.1| flagellin domain-containing protein [Fervidobacterium nodosum
Rt17-B1]
gi|154154087|gb|ABS61319.1| flagellin domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 391
Score = 179 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 72/453 (15%), Positives = 138/453 (30%), Gaps = 68/453 (15%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A +++ + +++ +R+SSGLR++ A+D+AA +I++ M+ L
Sbjct: 3 INHNLSALNAWRQITLTDSDMKKSLERLSSGLRINRASDDAAGLAISEKMRGQVKGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +IQ+EI QL+ ++
Sbjct: 63 SKNAQDAISLIQTAEGALNEIHAILQRMRELAVQAATDTNTDVDRWNIQAEIDQLRDEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+R + FN + L +L A + + KV I + + T +L+
Sbjct: 123 RISRATEFNTKKLLNGNL--EGFRAAPDAKVVAEGNIDLKVSIASSYVSVVEGTYILEIG 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
LD + + TI K TT
Sbjct: 181 QFQGTTTSNLDARVVLIKNNGTTVATVKNYTVGYVTIGGIKVTWNTTRF----------- 229
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ D V + T +
Sbjct: 230 ------------------------------NINQFGGALPKETVIDTGVARVEGLNTTGN 259
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ N +D + ++ S + + +
Sbjct: 260 QLIFQIGANEGANMVAGIDAVDSKNLGLITTVLKVTSQNAAERAISVIDGAIHKVSSIRS 319
Query: 361 MEEMVSF-IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ I AA + + SR + DADMA E
Sbjct: 320 QLGAIQNRLEHTIANLGVAAENLTAAESR---------------------IRDADMAKEM 358
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ Q Q + L+ N +L L RG
Sbjct: 359 MAFTKQQILMQSGMAMLAQSNGLPQNVLQLLRG 391
>gi|330838281|ref|YP_004412861.1| flagellin domain protein [Selenomonas sputigena ATCC 35185]
gi|329746045|gb|AEB99401.1| flagellin domain protein [Selenomonas sputigena ATCC 35185]
Length = 452
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 59/453 (13%), Positives = 131/453 (28%), Gaps = 6/453 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ N A + L + +VSSG++++ A D+ + SI++ M+ AL
Sbjct: 3 LVVKNNMQAANTLNTLNKNEKDRAKSLAQVSSGMKITSAGDDPSGMSISERMRVQIRALD 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQ 118
+ G+S + +A+ ++ ++++ T+K K D +IQ E+ + Q
Sbjct: 63 QDNQNTQNGNSMMKVAEGAVASTVEILRTLKEKCINAANDTNTDDDRATIQKEMDAMVDQ 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ D A T + + + G T
Sbjct: 123 INDNANIQYNGKILMSGTYNNQVSVAGGTQSTWANQAFAEGTNPSGTALTNYKDRNGNSL 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ K + + + +++ + T T KF
Sbjct: 183 GILPTDRMTVSYVKDGKTYEKTFRVGNFNLTACFTNTTSGTGKFVPDPGDTDLEAYQGPA 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ + A + +N++
Sbjct: 243 PNGLSKVGIDQYGHDVVTADGKDALTIRAKNGGTTGQIGGVTFCLTDSQGNIKKAQNNMF 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
T + + + + K ++ + + + +
Sbjct: 303 DKFQMTVRAQDPTPDNAMVFQIGTRSNQAVKVGFTDMH---AKALGMMGSDSKAIQVTTR 359
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
V+ I+ I +G+ +R+ I + + + DADMA
Sbjct: 360 ARANAAVNVIENAIGMCLDQQTVLGAAQARLQFTSSNIITASENTQYAESTIRDADMAKA 419
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
T + Q A L+ N S++ +LSL +
Sbjct: 420 MTDYTKSNILTQTAQAMLAQANQSSSGVLSLLQ 452
>gi|25992229|gb|AAN77108.1| flagellin [Escherichia coli]
Length = 448
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 56/448 (12%), Positives = 112/448 (25%), Gaps = 34/448 (7%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
+L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 SQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISVAQTTEG 60
Query: 80 GMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ + + ++ SIQ+EITQ ++ ++ + FNG L
Sbjct: 61 ALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEIDRVSEQTQFNGVKVLAE 120
Query: 137 DLGSSTASIAKSVIGSFIR-------------------------------DDNGKVQITT 165
+ A I G
Sbjct: 121 NNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATGSDLISKFKATGTDNYQI 180
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
V + + + K + +
Sbjct: 181 NGTDNYTVNVDSGAVQNEDGDAIFVSATDGSLTTKSDTKVGGTGIDATGLAKAAVSLAKD 240
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
+ A + T + + K ++ S +
Sbjct: 241 ASIKYQGITFTNKGTDAFDGSGNGTLTANIDGKDVTFTIDATEKDATLKTSDPVYKNSAG 300
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
+ T+ N+ + + D + S
Sbjct: 301 QFTTTKVENKAATASDLDLNNAKKVGSSLVVNGADYEVSADGKTVTGLGKTMYLSKSEGG 360
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
DA + ID + +G++ +R + + +
Sbjct: 361 SPILVKEDAAKSLQFTTNPLETIDKALAKVDNLRSDLGAVQNRFDFGITNLGNTVNNLFS 420
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAV 433
R+ DAD A+E + + Q QQ
Sbjct: 421 ARSRIEDADYATEVSNMFRAQIVQQAGT 448
>gi|68533172|dbj|BAE06131.1| Flagellin [Campylobacter lari]
Length = 487
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 72/483 (14%), Positives = 151/483 (31%), Gaps = 35/483 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA +++ +L
Sbjct: 5 INTNVASLNAQVNAGMNSRALDSSLARLSSGLRINSAADDASGMAIADSLRNQAASLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G IQ EI +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKVKATQAAQDGQSAKTRAMIQGEINKLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +++NG+ L + + + + + + S
Sbjct: 125 NIANTTTYNGKQLLSGAFSNQQFQVGDKANQTINATIGATQSAKIGQTRFETGSRITGSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G N + + + I+ K + A ++ ++
Sbjct: 185 NAGFTIKNYDGVNDFKIQSVILSTSAGTGLGALAAEINKSSDKTGVRATATVQTISSGTI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA--------- 291
QA +G + + + +
Sbjct: 245 QAGNTGDTFTINGVVIGKVAVQAGDKDGSLVAAINAKKDTTGVEASVVNGQLVLNSADGR 304
Query: 292 -----------------------TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + SD + + A G ++ +
Sbjct: 305 GIELSGLGTALSGNIASVNYGRLSLVKNDGSDIIISGGSGAGFGTAAAEATVNLESVKGQ 364
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
G++ ++ + T ++ DT I IG+ ++
Sbjct: 365 ISADIACAMGFNAMSSATQPGSKTGCVTTLQGAMAVMDIADTAIANLDTIRANIGATQNQ 424
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
I + I + + V+ ++ D D ASES S Q A++ N ++ +L
Sbjct: 425 ITSTINNISVTQVNVKAAESQIRDVDFASESANYSKANILAQSGSYAMAQANAASQNVLR 484
Query: 449 LFR 451
L +
Sbjct: 485 LLQ 487
>gi|16754891|dbj|BAB71800.1| flagellin [Campylobacter lari]
Length = 487
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 79/484 (16%), Positives = 143/484 (29%), Gaps = 36/484 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA +K+ +L
Sbjct: 4 INTNGASLNAQVNAGMNSRALDSSLARLSSGLRINSAADDASGLAIADSLKTQANSLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ +S + IA M + + ++ TIK K T + IQ EI +L +L
Sbjct: 64 INNANDANSMLQIADKAMDEQLKILDTIKVKATQAAQDGQTAKTRAMIQGEINKLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +++NG+ L + I + + + +
Sbjct: 124 NIATTTTYNGKQLLSGAFSNQQFQIGDKANQTVNATIGSTNSSKIGQTRFETGSRVTAGG 183
Query: 181 TDGTERYGLLDRNHK---------------------------------IKVEPQVLKDID 207
G N V +
Sbjct: 184 NLGFTIKNYDGVNDFKVQPVVISTSAGTGLGALAAEINKSSDKTGVRATAVVQTISSGTI 243
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
+ A K + T V S
Sbjct: 244 QAGNTGDTFTINGVVIGKVAVRAGDKDGSLVAAINAKKDTTGVEASVVNGQLVLNSADGR 303
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
S SA + + + + KN + STV T +
Sbjct: 304 GIEISGLGSALSGHIASVNYGRLSLVKNDGSDIIISGGSTVGLGTATAEATVNLESVKGQ 363
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+M T + + ++ DT I IG+ +
Sbjct: 364 IAASIACAMGFNAMSTADTRGKKQSAGVTTLQGAMAVMDIADTAIANLDTIRANIGATQN 423
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
+I + I + + V+ ++ D D ASES S Q A++ N ++ +L
Sbjct: 424 QITSTINNISVTQVNVKAAESQIRDVDFASESANYSKANILAQSGSYAMAQANAASQNVL 483
Query: 448 SLFR 451
L +
Sbjct: 484 RLLQ 487
>gi|18857919|dbj|BAB85480.1| flagellin [Campylobacter lari]
Length = 491
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 75/488 (15%), Positives = 141/488 (28%), Gaps = 40/488 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA +K+ L
Sbjct: 4 INTNGASLNAQVNAGMNSRALDSSLARLSSGLRINSAADDASGLAIADSLKTQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ +S + IA M + + ++ TIK K T + IQ EI +L +L
Sbjct: 64 INNANDANSMLQIADKAMDEQLKILDTIKVKATQAAQDGQTAKTRAMIQGEINKLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +++NG+ L + I + + +
Sbjct: 124 NIANTTTYNGKQLLSGSFSNQQFQIGDKANQTVNATIGSTNSSKIGQTRFETGARVTGGG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
N + + + + I+ K + A ++ +
Sbjct: 184 DISITLKNYDGINDYKFQNVTISTGVGTGLGALAAEINKASDKTGVRASATVQTISTAAL 243
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY--------------------- 279
A G S +
Sbjct: 244 TAGSTGEGFTINGVVIGKVVFKEGDKDGALVSAINAKKDTTGVEASIVDGKLVLNSADGR 303
Query: 280 ----------------IRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
V+ + + S G ST A +
Sbjct: 304 GIKLSGTLGALDTQIAEENYGRLTLVKNDGSDIVVSTTGAGFSTGATNAGLSEATVNLES 363
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+M I + ++ DT I IG
Sbjct: 364 IKGEISADIASAMGFNAMSKAQIGTGKQSAGVTTLQGAMAVMDIADTAIANLDTIRANIG 423
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
+ ++I + I + + V+ ++ D D ASES S Q A++ N ++
Sbjct: 424 ATQNQITSTINNISVTQVNVKAAESQIRDVDFASESANYSKANILAQSGSYAMAQANAAS 483
Query: 444 ARILSLFR 451
+L L +
Sbjct: 484 QNVLRLLQ 491
>gi|294508667|ref|YP_003572726.1| flagellin A [Salinibacter ruber M8]
gi|294344996|emb|CBH25774.1| Flagellin A [Salinibacter ruber M8]
Length = 455
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 76/452 (16%), Positives = 154/452 (34%), Gaps = 35/452 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A A Q L++ N L +++R+++G RV++A+D+AA + IA +++ GA
Sbjct: 36 INTNIQAQQAFQNLQNTNDQLSSLRERLTTGKRVNEASDDAAGFQIANRLEAKTGAQGQA 95
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
IG S + A+ + + ++ + K K T + +I +E+ L +++
Sbjct: 96 LRNIGDAKSALSTAEGALDSQLSILQSAKEKATQAANGSLSQSQRNAIANELQALGNEVD 155
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
DIA+ ++FNG+ L S++ + + + T + +
Sbjct: 156 DIAKNATFNGDKLLSGGSTSTSGDREANELTFQTGAGSDNTFSTQLKNSTTNALDIGGDI 215
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ I S D SG + + + A
Sbjct: 216 DLSASFSDGTEVKAGDFGTSPKPASISASNVDTSGGNLKGELSGGSFEVTVTEDETAADG 275
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ L + S + T G++ I
Sbjct: 276 TGASAPSNNSTLKFKVGDSSRAQTVDVGTSAGTGGTITLESDGSNKI------------- 322
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
S + + + + +++ + +
Sbjct: 323 -------------------KASVKNITAGQVGEGEEKSFTVSVNDTKNLGDRLQGGSAAD 363
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ +D I T+ IG+ +R+ +E ++ + + R+ DAD A T
Sbjct: 364 ARSIIDDVDAAIDKVTSDLSNIGASQNRLSFKESNLETTKTNLSAAQSRIEDADFAQTQT 423
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+++ LQ QQQ L+ N + +LSL G
Sbjct: 424 QVAKLQVQQQSGTAQLAQANAAGQSVLSLLGG 455
>gi|86146147|ref|ZP_01064473.1| flagellin [Vibrio sp. MED222]
gi|85836094|gb|EAQ54226.1| flagellin [Vibrio sp. MED222]
Length = 399
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 65/449 (14%), Positives = 133/449 (29%), Gaps = 53/449 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + L +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 NVSTNVSAMTAQRYLNKSSNELATSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
G S A+ M+ E T + ++RD+
Sbjct: 64 AMRNANDGISIAQTAEGAMN----------------------------ESTNILQRMRDL 95
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A + T S A+ + + LL+ S
Sbjct: 96 AIQ------------SSNGTNSPAERQALNEETMALQDELNRIAETTAFGGRRLLNGSFG 143
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + + ++ D + + K K A +A
Sbjct: 144 EASFQIGSNSGEAMIMALTSIRADDFRMGGTTFDTENAKDKSWEVPVAAKDLKFEFKTKA 203
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
T+ + A + +G A+ R+ + I+
Sbjct: 204 GEEITLDISAKAGDDIEELATYINGQSDLINASVTDEGRIQVFVAEPDLDGEMRISGGLA 263
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
T + + T N +
Sbjct: 264 SELGFKNDAPEGQETTTTADGKVVPAPAVG-------------RTTLVQDVDLNTVAGSQ 310
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+S ID+ ++ + +G+ +R+ + + +++ V+ R+ D D A E+T++
Sbjct: 311 NAISVIDSAMQYVDSQRADLGAKQNRLSHSINNLANVQENVDASNSRIKDTDFAKETTQM 370
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q QQ L+ +SL +
Sbjct: 371 TKAQILQQAGTSILAQAKQLPNSAISLLQ 399
>gi|50121796|ref|YP_050963.1| putative flagellin [Pectobacterium atrosepticum SCRI1043]
gi|49612322|emb|CAG75772.1| putative flagellin [Pectobacterium atrosepticum SCRI1043]
Length = 484
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 72/476 (15%), Positives = 147/476 (30%), Gaps = 34/476 (7%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++ + L +R+SSGLR++ A D+AA +IA M ++ A S +++ + G
Sbjct: 9 LTILNQQDKSATRLSQAIERLSSGLRINGAKDDAAGQAIANRMTANLNANSVITNGMKDG 68
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSS 127
S + A++G++ +++ + TD S+ E Q++ ++ IA +
Sbjct: 69 LSLMQTAESGLNAINNLIQRGRQLAVQAANGTLSDTDQASLNGEYQQIREEIDRIASSTQ 128
Query: 128 -FNGENWLRTDLGSSTASIAK--------SVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
F + G A + V + + +G + + I T+ +D
Sbjct: 129 LFGRYPLAPAESGPQPAKLGNTLPLSKKFPVPNTNHQFPSGVISLAYIPAGAKNITITID 188
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
S + + + P D D+ T T T
Sbjct: 189 SLSADDDIQLFARDGRHLTGTPAEGADADIVWSANGVTDETTMNTAVITQNNGFLPNATY 248
Query: 239 F----------------DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
TI T G + +
Sbjct: 249 SADSLLQAGEYNITTGAQTTYQGMTITYSGDGDRFEDANTGGFNDGNVGAANRLEKIHID 308
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
++ + + + + + + + ++ + V
Sbjct: 309 EVTEDLIVIVVGSGVFNSSASWDELPTPTEPAPPLPPSVPISKETTFVVGASFGDTLQTV 368
Query: 343 TLNITRHANT------DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
TLN T + ++ D +K + GS +R +
Sbjct: 369 TLNPTPADSQSLGLSSVRLGTPEQARAALATFDNALKTLDGYRSEYGSQMNRFESVTTVL 428
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ A R++DAD A E + ++ Q QQ ++ LS N + +L L +G
Sbjct: 429 SQEKIATTAARSRILDADYALEVSAMTKAQILQQASMAVLSQANPQSGNVLKLLQG 484
>gi|16754887|dbj|BAB71798.1| flagellin [Campylobacter lari]
Length = 486
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 73/483 (15%), Positives = 151/483 (31%), Gaps = 35/483 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA +++ +L
Sbjct: 4 INTNGASLNAQVNAGMNSRALDSSLARLSSGLRINSAADDASGMAIADSLRNQAASLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G IQ EI +L +L
Sbjct: 64 INNGNDAIGILQTADKAMDEQLKILDTIKVKATQAAQDGQSAKTRAMIQGEINKLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +++NG+ L + I + + + + S
Sbjct: 124 NIANTTTYNGKQLLSGAFSNQQFQIGDKANQTINATIGATQSAKIGQTRFETGSRITGSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G N + + + I+ K + A ++ ++
Sbjct: 184 NAGFTIKNYDGVNDFKIQSVILSTSAGTGLGALAAEINKSSDKTGVRATATVQTISSGTI 243
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA--------- 291
QA +G + + + +
Sbjct: 244 QAGNTGDTFTINGVVIGKVAVQAGDKDGSLVAAINAKKDTTGVEASVVNGQLVLNSADGR 303
Query: 292 -----------------------TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + SD + + A G ++ +
Sbjct: 304 GIELSGLGTALSGNIASVNYGRLSLVKNDGSDIIISGGSGAGFGTAVAEATVNLESVKGQ 363
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
G++ ++ + T ++ DT I IG+ ++
Sbjct: 364 ISADIACAMGFNAMSSATQPGSKTGCVTTLQGAMAVMDIADTAIANLDTIRANIGATQNQ 423
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
I + I + + V+ ++ D D ASES S Q A++ N ++ +L
Sbjct: 424 ITSTINNISVTQVNVKAAESQIRDVDFASESANYSKANILAQSGSYAMAQANAASQNVLR 483
Query: 449 LFR 451
L +
Sbjct: 484 LLQ 486
>gi|15375422|dbj|BAB63937.1| flagellin [Campylobacter lari]
Length = 486
Score = 178 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 72/483 (14%), Positives = 151/483 (31%), Gaps = 35/483 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA +++ +L
Sbjct: 4 INTNGASLNAQVNAGMNSRALDSSLARLSSGLRINSAADDASGMAIADSLRNQAASLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G IQ EI +L +L
Sbjct: 64 INNGNDAIGILQTADKAMDEQLKILDTIKVKATQAAQDGQSAKTRAMIQGEINKLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +++NG+ L + + + + + + S
Sbjct: 124 NIANTTTYNGKQLLSGAFSNQQFQVGDKANQTINATIGATQSAKIGQTRFETGSRITGSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G N + + + I+ K + A ++ ++
Sbjct: 184 NAGFTIKNYDGVNDFKIQSVILSTSAGTGLGALAAEINKSSDKTGVRATATVQTISSGTI 243
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA--------- 291
QA +G + + + +
Sbjct: 244 QAGNTGDTFTINGVVIGKVAVQAGDKDGSLVAAINAKKDTTGVEASVVNGQLVLNSADGR 303
Query: 292 -----------------------TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + SD + + A G ++ +
Sbjct: 304 GIELSGLGTALSGNIASVNYGRLSLVKNDGSDIIISGGSGAGFGTAAAEATVNLESVKGQ 363
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
G++ ++ + T ++ DT I IG+ ++
Sbjct: 364 ISADIACAMGFNAMSSATQPGSKTGCVTTLQGAMAVMDIADTAIANLDTIRANIGATQNQ 423
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
I + I + + V+ ++ D D ASES S Q A++ N ++ +L
Sbjct: 424 ITSTINNISVTQVNVKAAESQIRDVDFASESANYSKANILAQSGSYAMAQANAASQNVLR 483
Query: 449 LFR 451
L +
Sbjct: 484 LLQ 486
>gi|28372338|dbj|BAC56994.1| flagellin [Campylobacter lari]
Length = 487
Score = 178 bits (449), Expect = 3e-42, Method: Composition-based stats.
Identities = 78/484 (16%), Positives = 150/484 (30%), Gaps = 36/484 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA +K+ +L
Sbjct: 4 INTNGASLNAQVNAGMNSRALDSSLARLSSGLRINSAADDASGLAIADSLKTQANSLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ +S + IA M + + ++ TIK K T + IQ EI +L +L
Sbjct: 64 INNANDANSMLQIADKAMDEQLKILDTIKVKATQAAQDGQTAKTRAMIQGEINKLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +++NG+ L + I + + + +
Sbjct: 124 NIANTTTYNGKQLLSGAFSNQQFQIGDKANQTVNATIGSTNSSKIGQTRFETGSRVTAGG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G N + + + I+ K + A ++ ++
Sbjct: 184 NLGFTIKNYDGVNDFKVQPVVISTSAGTGLGALAAEINKSSDKTGVRATAVVQTISSGTI 243
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAA------------------------- 275
QA +G +
Sbjct: 244 QAGNTGDTLTINGVVIGKVAVQAGDKDGSLVAAINAKKDTTGVEASVVNGQLVLNSADGR 303
Query: 276 --------SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
SA + + + + KN + STV T +
Sbjct: 304 GIEISGLGSALSGHIASVNYGRLSLVKNDGSDIIISGGSTVGLGTATAEATVNLESVKGQ 363
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+M T + + ++ DT I IG+ +
Sbjct: 364 IAASIACAMGFNAMSTADTRGKKQSAGVTTLQGAMAVMDIADTAIANLDTIRANIGATQN 423
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
+I + I + + V+ ++ D D ASES S Q A++ N ++ +L
Sbjct: 424 QITSTINNISVTQVNVKAAESQIRDVDFASESANYSKANILAQSGSYAMAQANAASQNVL 483
Query: 448 SLFR 451
L +
Sbjct: 484 RLLQ 487
>gi|238917954|ref|YP_002931471.1| flagellar hook-associated protein 3 FlgL [Eubacterium eligens ATCC
27750]
gi|238873314|gb|ACR73024.1| flagellar hook-associated protein 3 FlgL [Eubacterium eligens ATCC
27750]
Length = 515
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 66/513 (12%), Positives = 161/513 (31%), Gaps = 65/513 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A+ A+ L+ NL R+SSG +++ + D+AA +I++ M++ L
Sbjct: 3 IGTNVAAIVANNALQKSQNNLSTSIQRLSSGYKINGSKDDAAGCAISEKMRAQIKGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ G S + A+ +++ +++ +K + ++IQ EI Q+ ++
Sbjct: 63 GNNAKDGVSVISTAEGAINEIQSMLTRLKELSVQAANDVNSDDEREAIQKEINQINKEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN ++ + +L S + V + D+ + + + +
Sbjct: 123 RISEQTEFNTQSLINGNLSRRVYSDLQGVNQLSVSDNYTAGIYGITVTEDARQAIAVGTG 182
Query: 181 TDGTERYGLLDRN----------------------------------------HKIKVEP 200
T + +
Sbjct: 183 TISMSATTPIAADEAGVIKINGYSINITEGDTLDVVMGKIIDGVNITGGSAFATASLNND 242
Query: 201 QVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPN 260
+ + Y+ + + + + T + N T D A + +P AA
Sbjct: 243 TAANGTEYAGYEPTASYAGSTLVIMTNQYGSDQRMNITCDNASLANMLGIPQAAAKDGIL 302
Query: 261 TTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDT 320
++ + ++ + + T + + V + D+
Sbjct: 303 VEGSDVKAEIATDNNGDRVGFANSAIVSTKGTVITVTDVNNKNFSLDVPGNTVGTIFDDS 362
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS-------------- 366
+ + + ++ H + + ++
Sbjct: 363 NNNGSSVAGAGTAKTINQEVTDVGTMSIHVGANQDQVIVIDIPAITTYTLGTDNLNVMTH 422
Query: 367 --------FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+D I K+G+ +R + + + + + K + ++D DMA E
Sbjct: 423 YTASQAISTVDQAITRTNEIRSKLGAYENRFDHTTNNLDVSNENLTKSLSTMIDTDMAEE 482
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
T ++ Q A L+ N +++L L +
Sbjct: 483 MTTYTSETVLTQAATSILAQANERPSQVLQLLQ 515
>gi|154175408|ref|YP_001408971.1| flagellin B [Campylobacter curvus 525.92]
gi|112804062|gb|EAU01406.1| bacterial flagellin protein [Campylobacter curvus 525.92]
Length = 496
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 70/492 (14%), Positives = 147/492 (29%), Gaps = 44/492 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++ N +L +++SSGLR+ AAD+A+ SIA ++S AL
Sbjct: 5 INTNVNALNTHANAVSNNTDLSKSLNKLSSGLRIQTAADDASGLSIADSLRSQASALGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ +A M + + ++ TIK K T + +++Q++I +L +L
Sbjct: 65 IANGNDAIGIIQVADKAMDEQLKILDTIKVKATQSAQDGQTSQSRQALQADIVRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +SFNG+ L + I + + +L
Sbjct: 125 NIGNTTSFNGQQLLNGTFSNKEFQIGAYSNQTVKASIGATTSDKIGLTRFESSKLLTAMG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + N + I + + I+ K + + +
Sbjct: 185 AVNLKFLNVDGVNDVGVTAATISTGIGKGIGALAENINKVADKTGVRATYDVTWKASKAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
I ++ + + ++G+ ++ + + S +
Sbjct: 245 SGGLIKSLTINGVKIGDLEVKANDSNGALVNAINSVKDQTGVEASVDAESGKMVLTSRDG 304
Query: 301 PGYT-----------------------------------------NSTVAKVGNTHYYVD 319
Sbjct: 305 RAIQVKGDKISGGLGGKAHLSGFVGRLNLVRLDGRDIKISTSGAGKFADDAFSKDGGSQQ 364
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ S + K + I A + ++S ++ K
Sbjct: 365 SVSLRDVRGQIEGKLATAMGFQRMSKIITVAQSAGVMTLRGAMAVMSIAESAQKTLDLVR 424
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+GS+ +++ + I + + V+ ++ D D ASES S Q A+S
Sbjct: 425 SDLGSVQNQLQATVNNITVTQVNVKSAESQIRDVDFASESATFSKHNILAQSGAYAMSQA 484
Query: 440 NNSTARILSLFR 451
N+ +L L +
Sbjct: 485 NSVQQNVLKLLQ 496
>gi|16754893|dbj|BAB71801.1| flagellin [Campylobacter lari]
Length = 491
Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats.
Identities = 72/488 (14%), Positives = 140/488 (28%), Gaps = 40/488 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA +K+ L
Sbjct: 4 INTNGASLNAQVNAGMNSRALDSSLARLSSGLRINSAADDASGLAIADSLKTQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ +S + IA M + + ++ TIK K T + IQ EI +L +L
Sbjct: 64 INNANDANSMLQIADKAMDEQLKILDTIKVKATQAAQDGQTAKTRAMIQGEINKLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +++NG+ L + I + + +
Sbjct: 124 NIANTTTYNGKQLLSGSFSNQQFQIGDKANQTVNATIGSTNSAKIGQTRFETGARVTSGG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV------------------------SVYDASGT 216
N V + +
Sbjct: 184 DIAITLKNYDGINDYKFQSVTVSTGVGTGLGALAAEINKVSDQTGVRASATVQTISTAAL 243
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ + T +G + G + + S
Sbjct: 244 TAGSTGEGFTINGVVIGKVVFKAGDKDGALVSAINAKKDTTGVEASIVDGKLVLNSADGR 303
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ D+ + +N + + V T T +T +
Sbjct: 304 GIKLSGSIGDLDAQIAEENYGRLTLVKNDGSDIVVSTTGAGFSTGATNAGLSEATVNLES 363
Query: 337 SGYSMVTLNITRHANTDA-------------YNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+ + ++ DT I IG
Sbjct: 364 IKGEISADIASAMGFNAMSKAQIGTGKQSACVTTLQGAMAVMDIADTAIANLDTIRANIG 423
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
+ ++I + I + + V+ ++ D D ASES S Q A++ N ++
Sbjct: 424 ATQNQITSTINNISVTQVNVKAAESQIRDVDFASESANYSRANILAQSGSYAMAQANAAS 483
Query: 444 ARILSLFR 451
+L L +
Sbjct: 484 QNVLRLLQ 491
>gi|28372330|dbj|BAC56990.1| flagellin [Campylobacter lari]
Length = 490
Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats.
Identities = 73/487 (14%), Positives = 151/487 (31%), Gaps = 39/487 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + NL+ R+SSGLR++ AAD+A+ +IA +K+ +L
Sbjct: 4 INTNGASLNAQVNAGLNSRNLDSSLARLSSGLRINSAADDASGLAIADSLKTQANSLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ +S + IA M + + ++ TIK K T + IQ EI +L +L
Sbjct: 64 INNANDANSMLQIADKAMDEQLKILDTIKVKATQAAQDGQTAKTRAMIQGEINKLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +++NG+ L ++ I + + V+ +
Sbjct: 124 NIANTTTYNGKQLLSGSFSNAQFQIGDKANQTVNATIGSTNSAKVGQTRFETGAVITAAV 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
++G N + + + + I+ K + A ++ ++
Sbjct: 184 SNGFTIKSYDGINDYKIDSVAISYSVGTGLGALAAEINKASDKTGVRATATVQTISSGSL 243
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS------------------------ 276
A +G S +
Sbjct: 244 AAGSTGQTFAINGVVIGKVVYEAGDKNGALVSAINAKKDTTGVEASIVDGKLVLNSADGR 303
Query: 277 ------------ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ + + ++I ++ +
Sbjct: 304 GIKLSGSIGALGDQMLEENYGRLSLVKNDGSNIFISGTTVSNIGLGTAQMAEATVNLESI 363
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+M T + + ++ DT I IG+
Sbjct: 364 KGQITADIASAMGFNAMSTADTAGKKQSAGVTTLQGAMAVMDIADTAIANLDTIRANIGA 423
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
++I + I + + V+ ++ D D ASES S Q A++ N ++
Sbjct: 424 TQNQITSTINNISVTQVNVKAAESQIRDVDFASESANYSKANILAQSGSYAMAQANAASQ 483
Query: 445 RILSLFR 451
+L L +
Sbjct: 484 NVLRLLQ 490
>gi|28372328|dbj|BAC56989.1| flagellin [Campylobacter lari]
Length = 487
Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats.
Identities = 77/484 (15%), Positives = 151/484 (31%), Gaps = 36/484 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA +K+ +L
Sbjct: 4 INTNGASLNAQVNAGMNSRALDSSLARLSSGLRINSAADDASGLAIADSLKTQANSLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ +S + IA M + + ++ TIK K T + G IQ EI +L +L
Sbjct: 64 INNANDANSMLQIADKAMDEQLKILDTIKVKATQAAQDGQSAKTRAMIQGEINKLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +++NG+ L + I + + + + S
Sbjct: 124 NIANTTTYNGKQLLSGAFSNQQFQIGDKANQTINATIGATQSAKIGQTRFETGSRITGSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G N + + + I+ K + A ++ ++
Sbjct: 184 NAGFTIKNYDGVNDFKIQSVILSTSAGTGLGALAAEINKSSDKTGVRATATVQTISSGTI 243
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAA------------------------- 275
QA +G +
Sbjct: 244 QAGNTGDPFTINGVVIGKVAVQAGDKDGSLVAAINAKKDTTGVEASVVNGQLVLNSADGR 303
Query: 276 --------SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
+A + + + + KN S V T +
Sbjct: 304 GIELSGLGTALSGNIASVNYGRLSLVKNDGDDIIISGGSAVGLGTATAEATVNLESVKGQ 363
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+M T ++ + ++ DT I IG+ +
Sbjct: 364 IAASIACAMGFNAMSTADLVGKKQSAGVTTLQGAMAVMDIADTAIANLDTIRANIGATQN 423
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
++ + I + + V+ ++ D D ASES S Q A++ N ++ +L
Sbjct: 424 QLTATINNISVTQVNVKAAESQIRDVDFASESANYSKANILAQSGSYAMAQANAASQNVL 483
Query: 448 SLFR 451
L +
Sbjct: 484 RLLQ 487
>gi|25992231|gb|AAN77109.1| flagellin [Escherichia coli]
Length = 455
Score = 176 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 63/455 (13%), Positives = 126/455 (27%), Gaps = 40/455 (8%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+L +R+SSGLR++ A D+AA +IA ++ L+ S G S
Sbjct: 1 NKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISVAQTT 60
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ +++ + + I+ SIQ+EITQ ++ ++ + FNG L
Sbjct: 61 EGALNEINNNLQRIRELSVQATNGTNSDSDLSSIQAEITQRLEEIDRVSEQTQFNGVKVL 120
Query: 135 RTDLGSSTA---------------------------------SIAKSVIGSFIRDDNGKV 161
+ + +I F
Sbjct: 121 AENNEMKIQVGANDGEAITINLAKIDAKTLGLDGFNIDGAQKATGSDLISKFKATGTDNY 180
Query: 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKK 221
+ Y ++ ++ + + D + + +V + A I+
Sbjct: 181 DVGGDAYTVNVDSGAVKDKDNKDVFVSAADGSLTTSSDTKVDGKSIDATELAKLAINLAD 240
Query: 222 FKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR 281
K G + T A G + + S + ++ +
Sbjct: 241 QKSIDYKGITFTNKSGTAFDANGKGVLTANIDGQDVKFTINSTAATGADATITTDIDVYK 300
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI----DS 337
+ T N+ T + + D +
Sbjct: 301 NSAGQFTTTKVENKAATLSDLDLNAAKKTGSTLVVNGATYNVSADGKTVTDTTPGAPKVM 360
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
S N DA + ID + +G++ +R +
Sbjct: 361 YLSKSEGGSPILVNEDAAKSLQFTTNPLETIDKALAKVDNLRSDLGAVQNRFDFAITNLG 420
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ + R+ DAD A+E + + Q QQ
Sbjct: 421 NTVNNLFSARSRIEDADYATEVSNMFRAQILQQAG 455
>gi|16754889|dbj|BAB71799.1| flagellin [Campylobacter lari]
Length = 492
Score = 176 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 76/489 (15%), Positives = 145/489 (29%), Gaps = 41/489 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ +R+SSGLR++ AAD+A+ +IA +K+ L
Sbjct: 4 INTNGASLNAQVNAGLNSRALDQSLNRLSSGLRINSAADDASGLAIADNLKTQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ +S + IA M + + ++ TIK K T + IQ EI +L +L
Sbjct: 64 INNANDANSMLQIADKAMDEQLKILDTIKVKATQAAQDGQTAKTRAMIQGEINKLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +++NG+ L + I + + + S+
Sbjct: 124 NIANTTTYNGKQLLSGSFSNQQFQIGDKANQTVNATIGSTNSAKIGQTRFETGARVTGST 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N V + + + I+ + + A ++ ++
Sbjct: 184 DVAFKLLRYDGINDYQFQSVAVSYSVGTGLGALAAEINKVADQTGVRASATVQTISSGAL 243
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS------------------------ 276
A +G S +
Sbjct: 244 TAGSTGEGFAINGVVIGKVKYQAGDKDGALVSAINAKKDTTGVEASIVDGKLVLNSADGR 303
Query: 277 --------------ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
V+ + I S S A
Sbjct: 304 GIKLSGTIGGDLEAQMVEENYGRLTLVKNDGSDIIISTTAGGFSANATAAGLSEATTNLE 363
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKI 382
+ +M T T ++ DT I I
Sbjct: 364 SIKGEISADIASAMGFNAMSTAGTAGKKQTAGVTSLQGAMAVMDIADTAIANLDTIRANI 423
Query: 383 GSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNS 442
G+ ++I + I + + V+ ++ D D ASES S Q A++ N +
Sbjct: 424 GATQNQITSTINNISVTQVNVKAAESQIRDVDFASESANYSKANILAQSGSYAMAQANAA 483
Query: 443 TARILSLFR 451
+ +L L +
Sbjct: 484 SQNVLRLLQ 492
>gi|154250154|ref|YP_001410979.1| flagellin domain-containing protein [Fervidobacterium nodosum
Rt17-B1]
gi|154154090|gb|ABS61322.1| flagellin domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 389
Score = 176 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 71/451 (15%), Positives = 138/451 (30%), Gaps = 67/451 (14%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A+++ + + N ++ +R+SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNVNALNSWRNISMTNMDMSKTLERLSSGLRINRAGDDAAGLAISEKMRGQIKGLDMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ D IQ+E+ QL+ ++
Sbjct: 63 IKNSQDAISLIQTAEGALTEVHSILQRMRELAVQAASDTNTNVDRNQIQAELDQLREEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IAR + FN + L L +S
Sbjct: 123 RIARTTEFNTKKLLDGKLEGFRSSADA--------------------------------- 149
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ V + + I +F A TS +K +
Sbjct: 150 ----------KVVTGGNINVTVGGYSKTGATEGTYVIEVGQFNGAVTSQLDVKITQIGNN 199
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+T + A N T + S A +R + + +
Sbjct: 200 GTVLDSTTVTIGALSAALGNVTIKWQRVFTISDFGGALPTNEVIDSAVIRVEARYTANNQ 259
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ D + L K D + T+ + A + A
Sbjct: 260 LVFQIGANEGHNMIAGIDDMSAKALGLSTSTLKVTDQNSAEKTIMVVDAAIHRVSTARAA 319
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + + ++ I AA + R+ DADMA E
Sbjct: 320 LGAVQNRLEHTIANLGVAAENL---------------------TAAESRIRDADMAKEMM 358
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + Q Q ++ L+ N ++L L R
Sbjct: 359 QFTKQQILLQSSMSMLAQANAQPQQVLQLLR 389
>gi|25992225|gb|AAN77106.1| flagellin [Escherichia coli]
Length = 449
Score = 176 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 62/450 (13%), Positives = 133/450 (29%), Gaps = 37/450 (8%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
+L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 SQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISVAQTTEG 60
Query: 80 GMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ + + ++ SIQ+EITQ ++ ++ + FNG L
Sbjct: 61 ALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEIDRVSEQTQFNGVKVLAE 120
Query: 137 DLGSSTA---------------------------------SIAKSVIGSFIRDDNGKVQI 163
+ + +I F +
Sbjct: 121 NNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATGSDLISKFKATGTDNYDV 180
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
Y ++ ++ + +T D + K + + + A+ + +
Sbjct: 181 GGDAYTVNVDSGAVKDTTGNDIFVSAADGSLTTKSDTNIAGTGIDATALAAAAKNKAQND 240
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
T +G A G+ + + + + + +
Sbjct: 241 KFTFNGVEFTTTTAADGNGNGVYSAEIDGKSVTFTVTDADKKASLITSETVYKNSAGLYT 300
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ + +A T + + + + V Y V + T+ S
Sbjct: 301 TTKVDNKAATLSDLDLNAAKKTGSTLVVNGATYDVSADGKTITE-TASGNNKVMYLSKSE 359
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
N DA + ID + +G++ +R + + +
Sbjct: 360 GGSPILVNEDAAKSLQFTTNPLETIDKALAKVDNLRSDLGAVQNRFDFAITNLGNTVNNL 419
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLAV 433
R+ DAD A+E + + Q QQ
Sbjct: 420 FSARSRIEDADYATEVSNMFRAQILQQAGT 449
>gi|323575422|dbj|BAC56995.2| flagellin [Campylobacter lari]
Length = 487
Score = 176 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 77/484 (15%), Positives = 150/484 (30%), Gaps = 36/484 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA +K+ +L
Sbjct: 4 INTNGASLNAQVNAGMNSRALDSSLARLSSGLRINSAADDASGLAIADSLKTQANSLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ +S + IA M + + ++ TIK K T + G IQ EI +L +L
Sbjct: 64 INNANDANSMLQIADKAMDEQLKILDTIKVKATQAAQDGQSAKTRAMIQGEINKLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +++NG+ L + I + + + + S
Sbjct: 124 NIANTTTYNGKQLLSGAFSNQQFQIGDKANQTINATIGATQSAKIGQTRFETGSRITGSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G N + + + I+ K + A ++ ++
Sbjct: 184 NAGFTIKNYDGVNDFKIQSVILSTSAGTGLGALAAEINKSSDKTGVRATATVQTISSGTI 243
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAA------------------------- 275
QA +G +
Sbjct: 244 QAGNTGDTFTINGVVIGKVAVQAGDKDGSLVAAINAKKDTTGVEASVVNGQLVLNSADGR 303
Query: 276 --------SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
+A + + + + T S V T +
Sbjct: 304 GIELSGLGTALSGNIASVNYGRLSLVIKDGTDIIISGGSAVGLGTATAEATVNLESVKGQ 363
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+M T ++ + ++ DT I IG+ +
Sbjct: 364 IAASIACAMGLNAMSTADLVGKKQSAGVTTLQGAMAVMDIADTAIANLDTIRANIGATQN 423
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
+I + I + + V+ ++ D D ASES S Q A++ N ++ +L
Sbjct: 424 QITSTINNISVTQVNVKAAESQIRDVDFASESANYSKANILAQSGSYAMAQANAASQNVL 483
Query: 448 SLFR 451
L +
Sbjct: 484 RLLQ 487
>gi|222100796|ref|YP_002535364.1| Flagellin [Thermotoga neapolitana DSM 4359]
gi|221573186|gb|ACM23998.1| Flagellin [Thermotoga neapolitana DSM 4359]
Length = 387
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 74/452 (16%), Positives = 134/452 (29%), Gaps = 71/452 (15%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + + Y++ +R+SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNISALNAWRNISQTQYSMSKTLERLSSGLRINRAGDDAAGLAISEKMRGQIKGLNMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ D + IQ EI QL+ ++
Sbjct: 63 IKNAQDAISLIQTAEGALTEVHSILQRMRELAVQAASDTNTDVDREQIQKEIDQLREEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IAR + FN + L L S + + V+ N VQ+ T+ T +++
Sbjct: 123 RIARTTEFNTKKLLDGKLESFRSQVDAKVVTG----GNINVQLGTVSSAAVEGTYVIEVG 178
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
LD +
Sbjct: 179 QFSGTVTSELDVKITLFSVGGST------------------------------------- 201
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ I A N T + D V +
Sbjct: 202 -----SKIATITAGTAALGNITFTWDTNVLSISDFGGALPSNEVVDSAVVRVEAVYTAAS 256
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ N +D S ++ S + A + A
Sbjct: 257 QLIFQIGANEGHNMVAGIDDMSAAALGLTTASLKVTDQDSAERTIMVIDAAIHRVSTARA 316
Query: 361 MEEMVSF-IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ I AA + + SR + DADMA E
Sbjct: 317 ALGAIQNRLEHTISNLGVAAENLTAAESR---------------------IRDADMAKEM 355
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q Q ++ L+ N +L L R
Sbjct: 356 MEFTKQQILLQSSMAMLAQANTLPQNVLQLMR 387
>gi|28372332|dbj|BAC56991.1| flagellin [Campylobacter lari]
Length = 491
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 73/488 (14%), Positives = 149/488 (30%), Gaps = 40/488 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + NL+ R+SSGLR++ AAD+A+ +IA +K+ +L
Sbjct: 4 INTNGASLNAQVNAGLNSRNLDSSLARLSSGLRINSAADDASGLAIADSLKTQANSLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ +S + IA M + + ++ TIK K T + IQ EI +L +L
Sbjct: 64 INNANDANSMLQIADKAMDEQLKILDTIKVKATQAAQDGQTAKTRAMIQGEINKLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +++NG+ L ++ I + + V+ +
Sbjct: 124 NIANTTTYNGKQLLSGSFSNAQFQIGDKANQTVNATIGSTNSSKIGQTRFETGAVITAAV 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
++G N + + + + I+ K + A ++ ++
Sbjct: 184 SNGFTIKSYDGINDYKIDSVAISYSVGTGLGALAAEINKASDKTGVRATATVQTISSGTL 243
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAA------------------------- 275
A +G S
Sbjct: 244 TAGSTGASFAINGVVMGKVVYEAGDKNGALVSAINAKKDTTGVEASIVDGKLVLNSADGR 303
Query: 276 ------------SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
+ + + + I ++ +
Sbjct: 304 GIKLSGSIGTSLEGQMLEENYGRLSLVKNDGSDIFISGTNVSNIGLGTAQMAEATVNLES 363
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+M T + + ++ DT I IG
Sbjct: 364 VKGQITADIASAMGFNAMSTADTAGKKQSAGVTSLQGAMAVMDIADTAIANLDTIRANIG 423
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
+ ++I + I + + V+ ++ D D ASES S Q A++ N ++
Sbjct: 424 ATQNQITSTINNISVTQVNVKAAESQIRDVDFASESANYSKANILAQSGSYAMAQANAAS 483
Query: 444 ARILSLFR 451
+L L +
Sbjct: 484 QNVLRLLQ 491
>gi|3098299|gb|AAC63947.1| flagellin [Pseudomonas fluorescens]
Length = 393
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 63/446 (14%), Positives = 133/446 (29%), Gaps = 55/446 (12%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L+ R+S+G R++ A D+AA IA + S L
Sbjct: 3 LTVNTNIASLNTQRNLNTSSRALDTSLQRLSTGSRINSAKDDAAGLQIANRLSSQINGLG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
G S A+ + ++ ++ +++ ++ E L ++ +
Sbjct: 63 VAVKNSNDGISMAQTAEGALQQSTSILQRMRDLALQSSNGSNSTE----ERKALNDEVTE 118
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ LD +
Sbjct: 119 L---------------------------------------------------KKELDRIS 127
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ T G + + + + AT S + + +
Sbjct: 128 NTTTFGGRKLLDGTFGTTTFQVGSAANETISVKIDEMSTESLEATFSSGTVASGSVATAP 187
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A I + + A T S T S + + + N N
Sbjct: 188 ASASGAIAISVTMAGGQARTFSATYASGATAAEQVQALATVINDANIGVGAFVNDTGGID 247
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
++ T + S + + + ++ T+ E +
Sbjct: 248 LVSSLTSGSADGNIQNLTFASGASVTAAESAAGTGTNLAISTVTDDNQVKDIDLTEVKSS 307
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+E V ID I+ A +G++ +R ++ + + V GR+ D D A+E+
Sbjct: 308 QEAVIIIDQAIQSIDAQRASLGAVQNRFENTISNLQNIGENVSAARGRIQDTDFAAETAN 367
Query: 422 LSALQTQQQLAVQALSIVNNSTARIL 447
L+ Q QQ L+ N +L
Sbjct: 368 LTKNQILQQAGTSILAQANQLPQSVL 393
>gi|323490120|ref|ZP_08095340.1| flagellin [Planococcus donghaensis MPA1U2]
gi|323396168|gb|EGA88994.1| flagellin [Planococcus donghaensis MPA1U2]
Length = 431
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 64/428 (14%), Positives = 128/428 (29%), Gaps = 13/428 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ +++ +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTHRQMGSAQSAQMDSMEKLSSGLRINSAKDDAAGLTISEKMRGQIRGLEQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + A+ +S D++ ++ D IQ EI+QL ++
Sbjct: 63 SRNAQDGISLIQTAEGTLSVTQDILQRMRELSVQSANDTNTADDRAEIQKEISQLTEEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSST----------ASIAKSVIGSFIRDDNGKVQITTIDYYL 170
IA + FN + L ++G+ T S + + N +
Sbjct: 123 RIANTTEFNSKKLLTGEIGTKTNDSQNITGLSMSSSTQAGTLTFINSNATLATKASVTLT 182
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
V +D + Q D+ + + A T
Sbjct: 183 ATAGVNTVDKSDSLTIIANGKTYNVGTTAGQTYDDLAKKITSTVDGATATWDSTAGTFKF 242
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVR 290
ANA + T+ T S + A + +
Sbjct: 243 ESNDANADQSISVAETTLGALDGTKDFTTAATDTGSNASGLDAANTTFSYEGNKVTVTGG 302
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
+ +T + + +D + S
Sbjct: 303 SAGFEGLTFNLKADVGSTTTATVIGSTIDVSDQLTMQIGSNEGQSISININAMDASNLGV 362
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
++ ID IK ++ K+G++ +R+ + + + + R+
Sbjct: 363 ADIDVTTHEGASSAITSIDAAIKSVSSERSKLGAVQNRLEHSINNLNTSAENLTAAESRI 422
Query: 411 VDADMASE 418
D D A
Sbjct: 423 RDVDYAEA 430
>gi|46909846|gb|AAT06391.1| flagellin [Citrobacter freundii]
Length = 468
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 64/466 (13%), Positives = 125/466 (26%), Gaps = 45/466 (9%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDI 76
+ L +R+SSGLR++ A D+AA +IA S+ L+ S G S
Sbjct: 1 MNKSQSTLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQT 60
Query: 77 AKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
+ +++ + + ++ +D SIQ+EITQ ++ ++ + FNG
Sbjct: 61 TEGALNEINNNLQRVRELSVQASNGTNSDSDLSSIQAEITQRLGEIDRVSGQTQFNGVKV 120
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
L D A I ++ + + + N
Sbjct: 121 LAGDNTLKIQVGANDNETISINLKEITSSTLGLNTFSVTGDKAATADQLVKDFGATGSMN 180
Query: 194 HKIKVEP------------------------------------------QVLKDIDVSVY 211
+K+ + +
Sbjct: 181 YKLGADNFAVDVKSGAVTVQTGGTGAFAAAFVGAADGKLSSSANNIKVDTTVAATRDEAA 240
Query: 212 DASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
A+ +++ T A AT G +
Sbjct: 241 AAAAAVTSGGPGAKFTFKGTEWTAAATNTANTDGNGKFTATIDGTTITMDIVGATAGAGG 300
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
+ S I + + TT + + T +
Sbjct: 301 TATISGGNIYEQGAAGSDKLTTHATNVAAKESDLVAAKATKTGGTLTANTVTYTVDANGV 360
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ + + A + IDT + G +G++ +R
Sbjct: 361 VSQGGETTFVKNAGTANASLVKQSQASEATRNQLKLIDTALAQVDTLRGDLGAVQNRFDS 420
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+ + + R+ DAD A+E + +S Q QQ L+
Sbjct: 421 TITNLGNTVNNLTSARSRIEDADYATEVSNMSKAQILQQAGTSVLA 466
>gi|28372334|dbj|BAC56992.1| flagellin [Campylobacter lari]
Length = 487
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 77/484 (15%), Positives = 152/484 (31%), Gaps = 36/484 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA +K+ +L
Sbjct: 4 INTNGASLNAQVNAGMNSRALDSSLARLSSGLRINSAADDASGLAIADSLKTQANSLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ +S + IA M + + ++ TIK K T + G IQ EI +L +L
Sbjct: 64 INNANDANSMLQIADKAMDEQLKILDTIKVKATQAAQDGQSAKTRAMIQGEINKLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +++NG+ L + I + + + + S
Sbjct: 124 NIANTTTYNGKQLLSGAFSNQQFQIGDKANQTINATIGATQSAKIGQTRFETGSRITGSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G N + + + I+ K + A ++ ++
Sbjct: 184 NAGFTIKNYDGVNDFKIQSVILSTSAGTGLGALAAEINKSSDKTGVRATATVQTISSGTI 243
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAA------------------------- 275
QA +G +
Sbjct: 244 QAGNTGDTFTINGVVIGKVAVQAGDKDGSLVAAINAKKDTTGVEASVVNGQLVLNSADGR 303
Query: 276 --------SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
+A + + + + KN + S V T +
Sbjct: 304 GIELSGLGTALSGNIASVNYGRLSLVKNDGSDIIISGGSAVGLGTATAEATVNLESVKGQ 363
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+M T ++ + ++ DT I IG+ +
Sbjct: 364 IAASIACAMGFNAMSTADLVGKKQSAGVTTLQGAMAVMDIADTAIANLDTIRANIGATQN 423
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
++ + I + + V+ ++ D D ASES S Q A++ N ++ +L
Sbjct: 424 QLTATINNISVTQVNVKAAESQIRDVDFASESANYSKANILAQSGSYAMAQANAASQNVL 483
Query: 448 SLFR 451
L +
Sbjct: 484 RLLQ 487
>gi|212634358|ref|YP_002310883.1| flagellin [Shewanella piezotolerans WP3]
gi|212555842|gb|ACJ28296.1| Flagellin [Shewanella piezotolerans WP3]
Length = 434
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 64/434 (14%), Positives = 131/434 (30%), Gaps = 11/434 (2%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
+R++SGLR++ A D+AA I+ M S + G S A+ M ++ ++
Sbjct: 1 MERLASGLRINSAKDDAAGLQISNRMTSQINGIGVAMRNANDGISIAQTAEGSMQESTNI 60
Query: 88 MSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ +++ D ++Q EI L S+L IA +SF G+ L G+
Sbjct: 61 LQRMRDLSLQSANGSNSADDRDAMQKEINSLNSELTRIAETTSFGGQKLLDGTYGTQNFQ 120
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVL--------LDSSTDGTERYGLLDRNHKI 196
+ + + + + LD D ++
Sbjct: 121 VGSNANETISVSLSDTSASALGQHQLDGTGTTGAKLGAAVADGTSATATGVTTGTMKVNG 180
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
+ + AT + AT D I T +
Sbjct: 181 DSLTIAADAKATEIATQVNGLDNGVKAEATVTATVGALTGATVDADLKIGTKTYAMADYV 240
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
+ + + + + + A + + + V
Sbjct: 241 DNQDKLVEDLKADGFEASNDNGTVSITAKGVDSIALEGGAANTATLDGAAAVVAGKVKFA 300
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
V+ S + I + + + + ++ ID I
Sbjct: 301 AVEMTSQNNIALSGTAATITDVVGTASSSTLASVEGLDITDADGAQSAIAVIDAAIAGID 360
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
+ +G++ +R++ + + ++ V R+ D D A E+ L+ Q Q + L
Sbjct: 361 SQRADLGAVQNRMNFTINNLSNVQSNVSDARSRIQDVDFAKETAELTKQQILSQTSSAML 420
Query: 437 SIVNNSTARILSLF 450
+ N LSL
Sbjct: 421 AQANQLPQAALSLL 434
>gi|114706707|ref|ZP_01439607.1| flagellin a protein [Fulvimarina pelagi HTCC2506]
gi|114537655|gb|EAU40779.1| flagellin a protein [Fulvimarina pelagi HTCC2506]
Length = 429
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 141/451 (31%), Positives = 217/451 (48%), Gaps = 23/451 (5%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTS+LTN +AM+A Q L++ N LE QDRVS+GLRVS+A DNAAYWSIA M+SDN A+
Sbjct: 1 MTSLLTNVAAMTALQTLQNTNSMLEATQDRVSTGLRVSEARDNAAYWSIATTMRSDNKAM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV D++G+G++ VD A + M A DV+ IK K+T + G D +Q EI+QLQ+QLR
Sbjct: 61 SAVKDSLGIGAAVVDTAYSAMDSAKDVLDEIKAKLTTAAQDGVDRSKVQDEISQLQNQLR 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SF+G+NWL D + + +K +I SF R +G + +++I + T+ +
Sbjct: 121 SIAASASFSGQNWLSVDSSVAGYTSSKDIIASFSRSSSGALSLSSIKLDISAFTLFDSGT 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + T A
Sbjct: 181 GKAGIIDSGRNTGAGTITAAAGTAAAGTAGPPPTSGSYVGALSATETMDADDIWTVNLRV 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + +A TT G + + + + + G + + TT +++
Sbjct: 241 DGGADQKVVITKANVDSALGTTDGVITAANYARVLANAAVSSGVQGVTINTTTGAIVSNS 300
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G ++ + G T D+ +
Sbjct: 301 TGTASAVILGTGTTTINTDSVGVSEMDVTKAG-----------------------LTSND 337
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ++ D ++ TAAA +GS +RI +Q F+ + D +++G+G LVDADM EST
Sbjct: 338 IKAYINIADAALRKVTAAASTLGSAKNRIDMQMTFVSNLMDTIDRGIGTLVDADMTEEST 397
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ ALQTQQQL VQALSI NNS+ IL LF+
Sbjct: 398 KMRALQTQQQLGVQALSIANNSSQSILQLFQ 428
>gi|325291932|ref|YP_004277796.1| Flagellin A protein [Agrobacterium sp. H13-3]
gi|10281322|gb|AAG14364.1| flagellin A [Rhizobium lupini]
gi|325059785|gb|ADY63476.1| Flagellin A protein [Agrobacterium sp. H13-3]
Length = 410
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 141/451 (31%), Positives = 204/451 (45%), Gaps = 41/451 (9%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+LTN +AMSA Q LR I+ N+E Q R+SSG+RV A+DNAAYWSIA M+SDN +L
Sbjct: 1 MASVLTNINAMSALQTLRSISSNMEDTQSRISSGMRVGSASDNAAYWSIATTMRSDNASL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DAIGLG++KVD A AGM IDV+ IKNK+ E D IQ E+ QLQ QL+
Sbjct: 61 SAVQDAIGLGAAKVDTASAGMDAVIDVVKQIKNKLVTAQESSADKTKIQGEVKQLQEQLK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I +SF+GENWL+ DL ++T + + +
Sbjct: 121 GIVDSASFSGENWLKGDLSTTT-------------------------TKSVVGSFVREGG 155
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + K+ V+ + + A ++ + G + A+
Sbjct: 156 TVSVKTIDYALNASKVLVDTRATGTKTGILDTAYTGLNANTVTVDINKGGVITQASVRAY 215
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ ++ + A + G++ K + + K +
Sbjct: 216 STDEMLSLGAKVDGANSNVAVGGGSAFVKVDGSWVKGSVDAAASITASTPVAGKFAAAYT 275
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ A + +D T +
Sbjct: 276 AAEAGTAAAAGDAIIVDETNSGAGAVNLTQSVLTMDVSSMSSTDVGSY------------ 323
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ++ + T+A ++GSI RI LQ DF + DA+ KG+GRLVDADM EST
Sbjct: 324 ----LTGVEKALTSLTSAGAELGSIKQRIDLQVDFASKLGDALAKGIGRLVDADMNEEST 379
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+L ALQTQQQLA+Q+LSI N+ + ILSLFR
Sbjct: 380 KLKALQTQQQLAIQSLSIANSDSQNILSLFR 410
>gi|332530456|ref|ZP_08406399.1| flagellin domain-containing protein [Hylemonella gracilis ATCC
19624]
gi|332040116|gb|EGI76499.1| flagellin domain-containing protein [Hylemonella gracilis ATCC
19624]
Length = 470
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 61/469 (13%), Positives = 130/469 (27%), Gaps = 51/469 (10%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
GLR++ A D+AA +I++ S L+ + G S + + M A ++ ++
Sbjct: 1 GLRINSAKDDAAGLAISERFTSQIRGLTQATRNANDGISLAQVTEGAMGAASAILQRVRE 60
Query: 94 KITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVI 150
D +++ E+ QL ++L IA + FNG+ L G++ I +
Sbjct: 61 LAVQSANATNSAGDRQALNQEVIQLVAELDRIAATTEFNGQKLLDGTFGTAQFQIGANAN 120
Query: 151 GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
+ I + + G + + V
Sbjct: 121 QTIIAATANLRTGVYGNNQALNTATAAQTVATGATFGANGMSSEAFTINAAAGSAAINVV 180
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPN---------- 260
+ + K T + A A +
Sbjct: 181 ANETAKSVASKINQQTPATGVTAEARTNSLMTFQSAGAYTLTIQSDNGTPEPVSFSVTNP 240
Query: 261 --------------------------------------TTSGTSGSKSPSVAASATYIRM 282
T + S + + A I
Sbjct: 241 STPDGLSNAIAAVNEKSSKTGVVAALNAAGTALVLTNITGNDIMVSDTSVINAGNVTISK 300
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
D + +++T G + + + +
Sbjct: 301 MRPDSSGALSAVSTMTLAANSQGENAIVSGYVTFDSNKSFVLSHAAGATVAASSAYVGTD 360
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
T + + + +D+ + + K+G++ SR + +++ +
Sbjct: 361 TPSTLHKVADLDITTVDKSNDALKTVDSALAFVSGERAKLGALQSRFESTVNALQITTEN 420
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ R++DAD A+E+ LS Q QQ ++ N +L L +
Sbjct: 421 LTASRSRILDADFAAETANLSRAQILQQAGTAMVAQANQIPQGVLQLLQ 469
>gi|28372326|dbj|BAC56988.1| flagellin [Campylobacter lari]
Length = 491
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 79/488 (16%), Positives = 151/488 (30%), Gaps = 40/488 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA +K+ L
Sbjct: 4 INTNGASLNAQVNAGLNSRALDSSLARLSSGLRINSAADDASGLAIADSLKTQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ +S + IA M + + ++ TIK K T + G IQ EI +L +L
Sbjct: 64 INNANDANSMLQIADKAMDEQLKILDTIKVKATQAAQDGQSAKTRAMIQGEINKLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +S+NG+ L ++ I + + + S
Sbjct: 124 NIANTTSYNGKQLLSGSFSNAQFQIGDKANQTVNATIGATNSGKIGQTRFETGARITASG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV-----------SVYDASGTISTKKFKLATTSG 229
+ G N + + S + +++ S
Sbjct: 184 SSGLTIKSYDGVNDFVIQPVTISTSAGTGLGALAAEINKSSDITGVRATATVQTISSGSI 243
Query: 230 AWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
I + V A + + A+ + NS
Sbjct: 244 KAGTTGENFSINGVIIGKVSVQDNDKDGALVSAINAKKDTTGVEASMVNGQLVLNSADGR 303
Query: 290 RATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP----------------- 332
S+ + ++V + D ++ +
Sbjct: 304 GIELGGSLGTSLSGVVASVNYGRLSLVKNDGSDIIVNGGSLIGLGSAGSKAAEATVNLES 363
Query: 333 ---------KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+M T + T ++ DT I IG
Sbjct: 364 IKGEISADVASAMGFNAMTTAALAGKKQTAGVTTLQGAMAVMDIADTAIANLDTIRANIG 423
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
+ ++I + I + + V+ ++ D D ASES S Q A++ N ++
Sbjct: 424 ATQNQITSTINNISVTQVNVKAAESQIRDVDFASESANYSKANILAQSGSYAMAQANAAS 483
Query: 444 ARILSLFR 451
+L L +
Sbjct: 484 QNVLRLLQ 491
>gi|148269315|ref|YP_001243775.1| flagellin domain-containing protein [Thermotoga petrophila RKU-1]
gi|147734859|gb|ABQ46199.1| flagellin domain protein [Thermotoga petrophila RKU-1]
Length = 387
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 70/452 (15%), Positives = 137/452 (30%), Gaps = 71/452 (15%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + + Y++ +R+SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNISALNAWRNIDQTQYSMSKTLERLSSGLRINRAGDDAAGLAISEKMRGQIKGLNMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ D + IQ EI QL+ ++
Sbjct: 63 IKNAQDAISLIQTAEGALTEVHSILQRMRELAVQAASDTNTNVDREQIQKEIDQLREEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IAR + FN + L L + + V+ N VQ+ T+ T +++
Sbjct: 123 RIARTTEFNTKKLLDGKLEGFRSQVDAKVVTG----GNINVQLGTVSSKAVEGTYVIEVG 178
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
LD +
Sbjct: 179 QFNGTETSQLDVKITLFTAGG--------------------------------------- 199
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+T+ + T + + D V +
Sbjct: 200 ---YSSTVVTITAGSATLGGITFKWDTNVLSINDFGGALPKNEVVDSAVVRVEAIYTAAS 256
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ N +D S + + ++ + + + A + A
Sbjct: 257 QLIFQIGANEGHNMVAGIDNMSASALGLTTISLKVTTQDAAERAIMVVDAAIHRVSTARA 316
Query: 361 MEEMVSF-IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ I AA + + SR + DADMA E
Sbjct: 317 ALGAIQNRLEHTISNLGVAAENLTAAESR---------------------IRDADMAKEM 355
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q Q ++ L+ N +L L R
Sbjct: 356 MEFTKQQILLQSSMAMLAQSNTLPQNVLQLMR 387
>gi|281411987|ref|YP_003346066.1| flagellin domain protein [Thermotoga naphthophila RKU-10]
gi|281373090|gb|ADA66652.1| flagellin domain protein [Thermotoga naphthophila RKU-10]
Length = 387
Score = 174 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 70/452 (15%), Positives = 135/452 (29%), Gaps = 71/452 (15%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + + Y++ +R+SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNISALNAWRNIDQTQYSMSKTLERLSSGLRINRAGDDAAGLAISEKMRGQIKGLNMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ D + IQ EI QL+ ++
Sbjct: 63 IKNAQDAISLIQTAEGALTEVHSILQRMRELAVQAASDTNTNVDREQIQKEIDQLREEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IAR + FN + L L + + V+ N VQ+ T+ T +++
Sbjct: 123 RIARTTEFNTKKLLDGKLEGFRSQVDAKVVTG----GNINVQLGTVSSKAVEGTYVIEVG 178
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
LD +
Sbjct: 179 QFNGTETSQLDVKITLFTAGG--------------------------------------- 199
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+T+ + T + + D V +
Sbjct: 200 ---YSSTVVTITAGSATLGGITFKWDTNVLSINDFGGALPKNEVVDSAVVRVEAIYTAAS 256
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ N +D S ++ + + + A + A
Sbjct: 257 QLIFQIGANEGHNMVAGIDDMSAAALGLTTTSLKVTTQDAAERAIMVVDAAIHRVSTARA 316
Query: 361 MEEMVSF-IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ I AA + + SR + DADMA E
Sbjct: 317 ALGAIQNRLEHTISNLGVAAENLTAAESR---------------------IRDADMAKEM 355
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q Q ++ L+ N +L L R
Sbjct: 356 MEFTKQQILLQSSMAMLAQSNTLPQNVLQLMR 387
>gi|157164988|ref|YP_001467626.1| flagellin B [Campylobacter concisus 13826]
gi|157101491|gb|ABV23517.1| flagellin B [Campylobacter concisus 13826]
Length = 499
Score = 174 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 70/495 (14%), Positives = 151/495 (30%), Gaps = 47/495 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++ N +L +++SSGLR+ AAD+A+ SIA ++S AL
Sbjct: 5 INTNVNALNTHANAVSNNVDLSKSLNKLSSGLRIQTAADDASGLSIADSLRSQASALGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ +A M + + V+ TIK K T + +++Q++I +L +L
Sbjct: 65 IANGNDAIGIIQVADKAMDEQLKVLDTIKTKATQSAQDGQTTQSRQALQADIVRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +SFNG+ L + I + + +L +
Sbjct: 125 NIGNTTSFNGQQLLNGTFSNKEFQIGAYSNQTVKASIGATTSDKIGLTRFESSKLLTGTD 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + N ++ + V + I+ K + + +T
Sbjct: 185 KVSLKFLSVDGVNDISIASTKISTGLGTGVGKLAENINKTSDKTGIRATFDVTRTMSTSI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ I + + + ++G+ ++ A + S S
Sbjct: 245 VSVSIKSFAINGVKIGDLDVKENDSNGALVNAINAVKDQTGVEASINTEGKMVLTSRDGR 304
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV------------------ 342
+ ++ + ++I
Sbjct: 305 AFSVSGDNISKAIGMKKDQVFVGRINLVRLDGRDIKLSAKGAAGGDALKLESEAFSAKGG 364
Query: 343 --------------------------TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
+ A + ++ ++ K
Sbjct: 365 AQASVALRDVRGQIDGKLASAMGFQRMTKVLTVAQSAGVMTLKGAMAVMDIAESAQKTLD 424
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
+GS+ +++ + I + + V+ ++ D D ASES S Q A+
Sbjct: 425 QVRSDLGSVQNQLQATVNNITVTQVNVKSAESQIRDVDFASESANFSKHNILAQSGAYAM 484
Query: 437 SIVNNSTARILSLFR 451
S N+ ++ L +
Sbjct: 485 SQANSVQQNVMKLLQ 499
>gi|86211130|gb|ABC87262.1| flagellin [Xanthomonas campestris pv. campestris]
Length = 399
Score = 174 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 53/449 (11%), Positives = 126/449 (28%), Gaps = 53/449 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + +++ R+SSGLR++ A D+AA +I++ + L
Sbjct: 4 VINTNVMSLNAQRNLNTSSASMQTSIQRLSSGLRINSAKDDAAGLAISERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
S G S A+ M + + + + S + + L
Sbjct: 64 ASRNANDGISLAQTAEGAMVEIGSNL--------QRIRELSVQSSNATNSASDRDALNSE 115
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ + + + T + G+ + Q I+ +D L +
Sbjct: 116 VKQLTAEIDRVANQTNSNGTKLLNGDFSGALFQVGADAGQTIGINSIVDANVDSLGKANF 175
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
G +
Sbjct: 176 AAAVSGAGVTGTATASGSVTGISLSF---------------------------------- 201
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
+ + K + +A + + I + S
Sbjct: 202 -----------NDSTGSAKSVTIADVKVGAGDTAADVNKKVAAAINDKLDQTGMYASIKA 250
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
+ + + + T + + S + + ++ + +
Sbjct: 251 DGTMQIESLKAGQDFTSLSAGTSSAAGITVGAGLTTASAASGSTASTLSSLDISTFSGSQ 310
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ + +D + ++ +G++ +R + + + R+ D D A E+ L
Sbjct: 311 KALEIVDKALTAVNSSRADMGAVQNRFTSTIANLSATSENLSASRSRIRDTDYAKETAEL 370
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q QQ L+ + +LSL +
Sbjct: 371 TRTQILQQAGTAMLAQAKSVPQNVLSLLQ 399
>gi|229132588|ref|ZP_04261436.1| Flagellin [Bacillus cereus BDRD-ST196]
gi|228650820|gb|EEL06807.1| Flagellin [Bacillus cereus BDRD-ST196]
Length = 397
Score = 174 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 60/444 (13%), Positives = 137/444 (30%), Gaps = 50/444 (11%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R+++A+D+AA +IA M++ LS ++ G
Sbjct: 1 MRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLSVAANNTQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIARGSS 127
S + A + M+ +++ +++ ++ Q+ E L+ Q+ I++ +
Sbjct: 61 MSLIRTADSAMNSVSNILLRMRDLSNQSANGTNTDENQQALNKEFAALKDQIDYISKNTE 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
FN + L S D++
Sbjct: 121 FNDKKLLDGSNKSIAIQ----------------------------TLDNADTTKQINIDL 152
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ + + D++V + I+ + + A A+ T T
Sbjct: 153 SNVSTDTLNISGLTINGKKDITVTISDKDIANAATDIGKATSAQQGLADLTDTTPAVPDT 212
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
V P + + P + + + + S
Sbjct: 213 PAVIGTGTAGNPQFPAVKGTPEIPGSSPAEIAKAVDDFKQAFNKVKGLMSDSAVSAMEQK 272
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
A + + + I G + +
Sbjct: 273 FATFEKDKSLANAKDIGTAFSAPIAGNITKGEQNASG-------------------AIKS 313
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
ID ++ + +G+ +R+ + +K ++ ++ DADMA E + ++ +
Sbjct: 314 IDAALEKIASNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKI 373
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
+ + LS N + + L +
Sbjct: 374 LNEAGISMLSQANQTPQMVSKLLQ 397
>gi|113911619|gb|ABI48291.1| Fla1 flagellin [Eubacterium rectale DSM 17629]
Length = 427
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 50/427 (11%), Positives = 114/427 (26%), Gaps = 26/427 (6%)
Query: 51 QIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKS 107
+ M+ L S G S V A+ +++ ++ + T TD K+
Sbjct: 1 EKMRKQIKGLDRASTNAEDGVSAVQTAEGALTEVHSMLQRMNELATQSANGTNSNTDRKA 60
Query: 108 IQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTID 167
IQ EI QL +++ ++ + FN L+ D ++ G K +
Sbjct: 61 IQDEIDQLTTEIDRVSETTKFNETYLLKGDGSEKAHNVNAHDAGLDGVTLTDKGNTVDVT 120
Query: 168 YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+ + +V + + T +
Sbjct: 121 LKTLNAGDKISIAGKNYTIGSKAADIAAKIEAGTDTAKKSYTVNGTTYQVGTTNVFDSAG 180
Query: 228 SGAWLKAANATFDQAKGI--------------------ATIPVPLPAAPAAPNTTSGTSG 267
+ + A + ++
Sbjct: 181 NKIKKSDLTGNAGDTGDAVLKDLQDLVKDGSTVTIGTKTYTAMTDKDGGADGIDDNDSTV 240
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
T + S I N+ ++ Y +T N + + +
Sbjct: 241 ITDGKAYQLQTAEIVKASSIGADTAATNATNANDAYDTATTTFTLNKGNVSYKDGLSFNL 300
Query: 328 RKDLPKEIDSGYSMVTLNITRHA---NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
++ + ++ ++ + + + I I ++ +G+
Sbjct: 301 HVGADADMTNKIAVNIDSMNSAGLGIKGIKADTEQDATYAIDAIADAISTVSSQRSALGA 360
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
+ +R+ + + + + R+ D DMA E S Q L+ N S
Sbjct: 361 VQNRLEHTINNLDNVVENTTSAESRIRDTDMAEEMVNYSKNNILAQAGQSMLAQANQSNQ 420
Query: 445 RILSLFR 451
+L L +
Sbjct: 421 GVLQLLQ 427
>gi|113911625|gb|ABI48294.1| Fla2 flagellin [Roseburia intestinalis]
Length = 421
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 58/421 (13%), Positives = 109/421 (25%), Gaps = 20/421 (4%)
Query: 51 QIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT----DSK 106
+ M L S G S V A+ +++ ++ + D K
Sbjct: 1 EKMSKQIRGLDKASSNAQDGVSSVQTAEGALTEVHSMLQRMNELAVQASNGTNSKDTDRK 60
Query: 107 SIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTI 166
+IQ EI QL +++ +A + FN L+ D G T ++ G + T
Sbjct: 61 AIQDEIDQLNTEIDRVAETTKFNEIYLLKGDDGEKTVNMNAHDAGLKGTLVDNGSGKATF 120
Query: 167 DYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ KI + + +
Sbjct: 121 TMKALSAGDSVSIGGKNYTIGSTAADAQKIVDAQKKVGGKVTVNGVEYTYDNADTKWKDA 180
Query: 227 TSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD 286
A + K A V T + + + + ++
Sbjct: 181 DGNDVKIGTGANAGEIKIGAGDKVSDGTTTLTAMTDEKNAAGAATADGVDDNDNSVITAE 240
Query: 287 IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI 346
+ ++ A V + T S K S + ++
Sbjct: 241 KAYSLAKDELVAANHIGDTENTAAVAQDTTNKNIFKITTGSAKVANTLSFSLHVGADADM 300
Query: 347 TRHANTDAYNEKLAM----------------EEMVSFIDTQIKCATAAAGKIGSISSRIH 390
T D A + I I ++ +G++ +R+
Sbjct: 301 TNKITVDIDTMNSANLGIKGLNVTDKNGTAATYAIDAISDAISKVSSQRSALGAVQNRLE 360
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D + + + R+ D DMA E S Q L+ N S +L L
Sbjct: 361 HTIDNLDNISENTSSAESRIRDTDMAKEMVNYSKNNILAQAGQSMLAQANQSNQGVLQLL 420
Query: 451 R 451
+
Sbjct: 421 Q 421
>gi|325291931|ref|YP_004277795.1| Flagellin B protein [Agrobacterium sp. H13-3]
gi|325059784|gb|ADY63475.1| Flagellin B protein [Agrobacterium sp. H13-3]
Length = 411
Score = 173 bits (437), Expect = 5e-41, Method: Composition-based stats.
Identities = 154/451 (34%), Positives = 213/451 (47%), Gaps = 41/451 (9%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AMSA Q LR I N+E Q VSSGLRV+ A+DNAAYWSIA M+SDNGAL
Sbjct: 1 MTSILTNAAAMSALQTLRTIGQNMENTQASVSSGLRVASASDNAAYWSIATTMRSDNGAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG++KVD A AGM IDV+ IKNK+ A E G D IQ E+ QLQ Q++
Sbjct: 61 SAVQDALGLGAAKVDTASAGMESIIDVVKQIKNKLVAATEDGVDKAKIQGEVKQLQDQIK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I +SF+GENWL+ DL T
Sbjct: 121 GIIDSASFSGENWLKGDLS--------------------------------TTTTKTVVG 148
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ E + + ++ + + +G + T L +
Sbjct: 149 SFVREGGTVSVKTIGYTLDASKVLVDTRATGTKTGILDTAYTGLNANTVTVDINKGGVIT 208
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
QA A + + A + + + + S + + T ++ +
Sbjct: 209 QASVRAYSTDEMLSLGAKVDGANSNVAVGGGAAFVKVNGSWVQGSVVAAASITASTPVAG 268
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T A+ G D + E +SG V L + +
Sbjct: 269 KFAAAYTAAEAGTAAAVGDA---------IIVNETNSGTGAVNLTQSVLTMDVSSMTLTD 319
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + ++ + T+AA ++GSI RI LQEDF + D+++KG+GRLVDADM EST
Sbjct: 320 VGSYLKGVEKALTSLTSAAAELGSIKMRIDLQEDFASKLSDSIDKGIGRLVDADMNEEST 379
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+L ALQTQQQLA+Q+LSI N S+ ILSLFR
Sbjct: 380 KLKALQTQQQLAIQSLSIANTSSENILSLFR 410
>gi|115381392|gb|ABI96378.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Kentucky]
gi|115381394|gb|ABI96379.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Kentucky]
Length = 462
Score = 173 bits (437), Expect = 5e-41, Method: Composition-based stats.
Identities = 61/460 (13%), Positives = 123/460 (26%), Gaps = 48/460 (10%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAKTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT----ERYGLLDRN 193
+ A I Q +D + +DS + L
Sbjct: 121 NTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVDSKAVTVAANLDITDLNKDA 180
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
+ ++K + + T F + V +
Sbjct: 181 ALKAGTGATTGTAAIKDGKVYYDSASKNYYVEVTGLTTPDDGKNGFYKVNVADDGKVSMT 240
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
A A + + + + +++ N
Sbjct: 241 AGTAMEAGKPAGAVEVTKTQEEKNPLPLSTDLKTSLKSGGITDPEIAAAQVVKMSYTDKN 300
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN----------------- 356
+ + + G V A+
Sbjct: 301 GKTIDGGYAVKVGDNYYAATQKKDGSFSVNTTSYTAADGTTKTALNQLGGADGKTEVVSI 360
Query: 357 ------------------------EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
E + ID + A +G++ +R +
Sbjct: 361 DGKTYNASKAAGHDFKAQPELAEAAAKTTENPLPKIDAALAQVDALRSDLGAVQNRFNSP 420
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ + + R+ D+D A+E + +S Q QQ
Sbjct: 421 ISNLGNTVNNLSSARSRIEDSDYATEVSHMSRAQILQQAG 460
>gi|15643521|ref|NP_228567.1| flagellin [Thermotoga maritima MSB8]
gi|4981286|gb|AAD35840.1|AE001746_1 flagellin [Thermotoga maritima MSB8]
Length = 387
Score = 173 bits (437), Expect = 5e-41, Method: Composition-based stats.
Identities = 72/451 (15%), Positives = 139/451 (30%), Gaps = 69/451 (15%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + + Y++ +R+SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNISALNAWRNISQTQYSMSKTLERLSSGLRINRAGDDAAGLAISEKMRGQIKGLNMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ D + IQ EI QL+ ++
Sbjct: 63 IKNAQDAISLIQTAEGALTEVHSILQRMRELAVQAASDTNTDVDREQIQKEIDQLREEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IAR + FN + L L S + + V+ N VQ+ ++ T +++
Sbjct: 123 RIARTTEFNTKKLLDGKLESFRSQVDAKVVTG----GNINVQLGSVSSAAVEGTYVIEVG 178
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
LD +
Sbjct: 179 QFNGAETSELDVKITLFTAGG--------------------------------------- 199
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + +A + + S + A VR + S
Sbjct: 200 --YSTTVVTITVGSATVGNINFTWDTDVLSINDFGGALPKNEVVDSAVVRVEAIYTSASQ 257
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ D + L + + + A + A
Sbjct: 258 LIFQIGANEGHNMVAGIDDMSAAALGLTTVSLDVTTQDAAERAIMVVDAAIHRVSTARAA 317
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + + ++ I AA + + SRI DADMA E
Sbjct: 318 LGAVQNRLEHTISNLGVAAENLTAAESRI---------------------RDADMAKEMM 356
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q Q ++ L+ N +L L R
Sbjct: 357 EFTKQQILLQSSMAMLAQSNTLPQNVLQLMR 387
>gi|25992223|gb|AAN77105.1| flagellin [Escherichia coli]
Length = 454
Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 62/454 (13%), Positives = 123/454 (27%), Gaps = 40/454 (8%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
+L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 SQSSLTSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISVAQTTEG 60
Query: 80 GMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ + + I+ SIQ+EITQ ++ ++ + FNG L
Sbjct: 61 ALNEINNNLQRIRELSVQATNGTNSDSDLSSIQAEITQRLEEIDRVSEQTQFNGVKVLAE 120
Query: 137 DLGSSTA---------------------------------SIAKSVIGSFIRDDNGKVQI 163
+ + +I F +
Sbjct: 121 NNEMKIQVGANDGETITINLAKIDAKTLGLDGFNINGAQKATGSDLISKFKATGTDNYDV 180
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
Y ++ E+ + + + D + + +V + + A I
Sbjct: 181 GGKTYTVNVESGAVKNDANKDVFVSAADGSLTTSSDTKVSGESIDATELAKLAIKLADKG 240
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
G A G + + S ++ +
Sbjct: 241 SIEYKGITFTNNTGAELDANGKGVLTANIDGQDVQFTIDSDAPTGAGATITTDTAVYKNS 300
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI----DSGY 339
+ T N+ T + + D +
Sbjct: 301 AGQFTTTKVENKAATLSDLDLNAAKKTGSTLVVNGATYNVSADGKTVTDTTPGAPKVMYL 360
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
S N DA + ID + +G++ +R +
Sbjct: 361 SKSEGGSPNLVNEDAAKSLQFTTNPLETIDKALAKVDNLRSGLGAVQNRFDFAITNLGNT 420
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ + R+ DAD A+E + + Q QQ
Sbjct: 421 VNNLFSARSRIEDADYATEVSNMFRAQILQQAGT 454
>gi|90415309|ref|ZP_01223243.1| flagellar protein [marine gamma proteobacterium HTCC2207]
gi|90332632|gb|EAS47802.1| flagellar protein [marine gamma proteobacterium HTCC2207]
Length = 387
Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 62/431 (14%), Positives = 120/431 (27%), Gaps = 47/431 (10%)
Query: 24 LEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSK 83
+ +R+S+G R++ AAD+AA +I+ + S L S + A +
Sbjct: 1 MGQTMERLSTGSRINSAADDAAGLAISSKLTSQVRGLDQAQRNANDAISMIQTADGAAIE 60
Query: 84 AIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGS 140
+++ ++ +D ++ E L ++ I + +NG + L G+
Sbjct: 61 IDNMLQRMREVSVQAANGTNTTSDIANLDIEFAALADEIDRIVNATEWNGMSILDGTSGT 120
Query: 141 STASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
+ + + S+ G + L
Sbjct: 121 AGSFNFQIGANDAQTLAVDFSDFNLTAGSTATAERAAVSAVKGVQVIDLKAAVSDGVNYN 180
Query: 201 QVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPN 260
T+ T K + T + A + A + A A
Sbjct: 181 VGDTFNIGGTEITLKTLDTGKVTVTTIAKDIGDALDGFTAAASNNTVEITQVVGAAFADP 240
Query: 261 TTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDT 320
T +G+ S +
Sbjct: 241 MTVTFNGTGS--------------------------------------------TPGTVS 256
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
S + K S + A + +V+ +D I +
Sbjct: 257 TSLKTVGVAAVAKVDAVADSKPMSSNLSGALSANATITSTTANIVTTLDKAIAGVASQRA 316
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
G+ +R+ D + + R+ DAD A+E+T L+ Q QQ LS N
Sbjct: 317 TFGAAINRLEYTVDNLANVSQNTSASRSRIQDADYAAETTELARTQIIQQAGTAMLSQAN 376
Query: 441 NSTARILSLFR 451
+L+L +
Sbjct: 377 QQAQSVLALLK 387
>gi|86211132|gb|ABC87263.1| flagellin [Xanthomonas campestris pv. campestris]
Length = 399
Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 56/449 (12%), Positives = 120/449 (26%), Gaps = 53/449 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + +++ R+SSGLR++ A D+AA +I++ + L
Sbjct: 4 VINTNVMSLNAQRNLNTSSASMQTSIQRLSSGLRINSAKDDAAGLAISERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
S G S A+ M + + S
Sbjct: 64 ASRNANDGISLAQTAEGAMVEIG-------------SNLQRIRELSVQSSNATNSASDRD 110
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A S + + T ++ +V V + +
Sbjct: 111 ALNSEVKQLTAEIDRVANQTNFNGTKLLNGDFSGALFQVGADAGQTIGINSIVDANVDSL 170
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
G + + + + + + K A ++
Sbjct: 171 GKANFAAAVSGAGVTGTATASGSVTGISLSFNDSTGSAKSVTIADVKVGAGDTAADVNKK 230
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
A A GT +S T + G S+
Sbjct: 231 VAAAINDKLDQTGMYASIKADGTMQIESLKAGQDFTSLSAGTSNAAGI------------ 278
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
+ S + + ++ + +
Sbjct: 279 ----------------------------TVGAGLTTASAASGSTASTLSSLDISTFSGSQ 310
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ + +D + ++ +G++ +R + + + R+ D D A E+ L
Sbjct: 311 KALEIVDKALTAVNSSRADMGAVQNRFTSTIANLSATSENLSASRSRIRDTDYAKETAEL 370
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q QQ L+ + +LSL +
Sbjct: 371 TRTQILQQAGTAMLAQAKSVPQNVLSLLQ 399
>gi|10281324|gb|AAG14365.1| flagellin B [Agrobacterium sp. H13-3]
Length = 411
Score = 173 bits (436), Expect = 7e-41, Method: Composition-based stats.
Identities = 154/451 (34%), Positives = 213/451 (47%), Gaps = 41/451 (9%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AMSA Q LR I N+E Q VSSGLRV+ A+DNAAYWSIA M+SDNGAL
Sbjct: 1 MTSILTNAAAMSALQALRTIGQNMENTQASVSSGLRVASASDNAAYWSIATTMRSDNGAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG++KVD A AGM IDV+ IKNK+ A E G D IQ E+ QLQ Q++
Sbjct: 61 SAVQDALGLGAAKVDTASAGMESIIDVVKQIKNKLVAATEDGVDKAKIQGEVKQLQDQIK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I +SF+GENWL+ DL T
Sbjct: 121 GIIDSASFSGENWLKGDLS--------------------------------TTTTKTVVG 148
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ E + + ++ + + +G + T L +
Sbjct: 149 SFVREGGTVSVKTIGYTLDASKVLVDTRATGTKTGILDTAYTGLNANTVTVDINKGGVIT 208
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
QA A + + A + + + + S + + T ++ +
Sbjct: 209 QASVRAYSTDEMLSLGAKVDGANSNVAVGGGAAFVKVNGSWVQGSVVAAASITASTPVAG 268
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T A+ G D + E +SG V L + +
Sbjct: 269 KFAAAYTAAEAGTAAAVGDA---------IIVNETNSGTGAVNLTQSVLTMDVSSMTLTD 319
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + ++ + T+AA ++GSI RI LQEDF + D+++KG+GRLVDADM EST
Sbjct: 320 VGSYLKGVEKALTSLTSAAAELGSIKMRIDLQEDFASKLSDSIDKGIGRLVDADMNEEST 379
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+L ALQTQQQLA+Q+LSI N S+ ILSLFR
Sbjct: 380 KLKALQTQQQLAIQSLSIANTSSENILSLFR 410
>gi|83814250|ref|YP_446729.1| phase 1 flagellin [Salinibacter ruber DSM 13855]
gi|83755644|gb|ABC43757.1| phase 1 flagellin [Salinibacter ruber DSM 13855]
Length = 420
Score = 173 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 72/453 (15%), Positives = 154/453 (33%), Gaps = 40/453 (8%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I TN A A Q L D + L ++R+++GLR++ A+D+AA + IA+ +++ G+
Sbjct: 5 SQINTNIQAQQAFQNLSDTSEQLAETRERLTTGLRINSASDDAAGFEIAEGLEARTGSQQ 64
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQS---Q 118
IG S + +A+ G+ ++++ + + K + +LQ +
Sbjct: 65 QALRNIGDAKSALSVAEGGLDSQLNILQSAREKAVQAANGSLSQNERNAIAGELQEQVGE 124
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ DIA+ ++FNG+ + + + + D D
Sbjct: 125 INDIAKNTTFNGDKLIEGGTSGDSGNSVGLTFQTGSESDQTFDVNIENSTADDLGVRQPS 184
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + ++ + ++
Sbjct: 185 VNVNQATTNSGGQLVNEGDFAESAVSGLE------------------------------- 213
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ A + G S AS N +
Sbjct: 214 ------GSVTVASGSTASTLASGLEGGEFEVQVSQTASDKIKLSANGNSATLTGVNAGNG 267
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ G T++K G + T+ + +++ + N
Sbjct: 268 TFSGAGTLTLSKSGTKTIQAKASNITIATDSLEQGGDAKSFTVEVRDELDIGTRLQNNGA 327
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
E+++ +D+ I T+ +G+ +R+ +E ++ + ++ R+ DAD A E
Sbjct: 328 DEAREIINDVDSAINSLTSQLSDLGASQNRLSFKESNLETSQTNLQAAQSRIQDADFAKE 387
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
T+ + LQ QQQ L+ N + +LSL +
Sbjct: 388 QTQAAKLQVQQQSGTAQLAQANAAGQSVLSLLQ 420
>gi|50082705|gb|AAT70050.1| flagellin [Pectinatus cerevisiiphilus]
Length = 446
Score = 173 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 71/450 (15%), Positives = 158/450 (35%), Gaps = 6/450 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ N SA++ + + L +VSSG++++ AADN A ++I++ M++ +L
Sbjct: 3 LVVKNNMSALNTLNIMGTNSNALSKSLQKVSSGMKINSAADNPAGYAISERMRTQIRSLD 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
+ G + + A+ +S +D++ T+K K+ + + + +
Sbjct: 63 QDNQNAKNGQNMLKTAEGAVSSTVDILKTLKEKVLDAANDTNTTFDRNTIQDYMNQAIDQ 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I ++ + L D + A+ +V + + + +D L+
Sbjct: 123 INDNANASYNGKLLVDGSMNKATAGATVTYTNESLGTATDFGSALTDLVDRNGNSLNILD 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
T + + V V+ + + + + S A +
Sbjct: 183 KDTVSISYVVNGKTMTTSFSVGSSKLSDVFGSVTSATGYSDFANSVSFGNTFADSQIGTT 242
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A+G+ + A ++ SG G+ + I + +D V+ + + + +
Sbjct: 243 AEGLMMHTADGTSVLAISSSASGVGGNIAGFT------ISITGTDGNVKKSVNSKLDAWS 296
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
++ N R L + ++ +
Sbjct: 297 EQISAQDKSNDNAVTMQIGTKANQSIRVGLSDMRAQALGLQGVSTDGSVQNLDITTRANA 356
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ +D ++ A KIGS+ SR+ +D + + V+ + DADMA E T
Sbjct: 357 NASINVLDNAVQKALKEQTKIGSVESRLDYTQDNLTTQSENVQASESTIRDADMAKEMTE 416
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q + L+ N S+ IL L +
Sbjct: 417 YTKNNVLMQASQAMLAHANQSSQNILQLLQ 446
>gi|225374926|ref|ZP_03752147.1| hypothetical protein ROSEINA2194_00549 [Roseburia inulinivorans DSM
16841]
gi|225213247|gb|EEG95601.1| hypothetical protein ROSEINA2194_00549 [Roseburia inulinivorans DSM
16841]
Length = 430
Score = 172 bits (435), Expect = 9e-41, Method: Composition-based stats.
Identities = 68/452 (15%), Positives = 130/452 (28%), Gaps = 67/452 (14%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N AM+A++ L +++SSG R++ AAD+AA +I++ M+ L
Sbjct: 43 VVQHNMQAMNANRMLNVTTGQQAKSTEKLSSGYRINRAADDAAGLTISEKMRKQIRGLDQ 102
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
S G S V A+ +++ ++ + D +IQ+EITQL +++
Sbjct: 103 ASTNAQDGVSAVQTAEGALTEVHSMLQRMNELAVQSANGTNAQSDRDAIQAEITQLTTEI 162
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FN L+ D + V +
Sbjct: 163 NRVSETTKFNETYLLKGD-------------------------------TKGTKDVYFGT 191
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S G + L +K +++ LKD + + A++
Sbjct: 192 SRYGIKDNVTLYDANKTQLDENTLKDTLAKGGKVYKDQNATQLAKKGVDYAYVTKFYDAN 251
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A N S + V N D+
Sbjct: 252 GKEVSAEKAATGGAAVYGDKNAQIKISDDGTDLVTNKYVTKDSVNDDLVFNLHVGADSEI 311
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + T D I + V+ +
Sbjct: 312 NNKISVTIEEMSSKGLGVEGLKVDTEDDATVSIDTISAAIQKVSSQRS------------ 359
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + +++ + + R+ D DMA E
Sbjct: 360 ----ALGAVQNRLEHTIDN----------LDNVVENTT-------AAESRIRDTDMAEEM 398
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q L+ N ST +LSL +
Sbjct: 399 VNYSKNNILAQAGQSMLAQANQSTQGVLSLLQ 430
>gi|15964422|ref|NP_384775.1| flagellin A protein [Sinorhizobium meliloti 1021]
gi|307311564|ref|ZP_07591205.1| flagellin domain protein [Sinorhizobium meliloti BL225C]
gi|17366437|sp|Q03841|FLAA1_RHIME RecName: Full=Flagellin A
gi|152224|gb|AAA26279.1| flagellin A [Sinorhizobium meliloti]
gi|15073599|emb|CAC45241.1| Flagellin A [Sinorhizobium meliloti 1021]
gi|306899581|gb|EFN30210.1| flagellin domain protein [Sinorhizobium meliloti BL225C]
Length = 394
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 141/451 (31%), Positives = 190/451 (42%), Gaps = 57/451 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN+SAM+A LR I+ ++E Q R+SSGLRV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNNSAMAALSTLRSISSSMEDTQSRISSGLRVGSASDNAAYWSIATTMRSDNQAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG++KVD A +GM AI+V+ IK K+ A E G D IQ EITQL+ QL
Sbjct: 61 SAVQDALGLGAAKVDTAYSGMESAIEVVKEIKAKLVAATEDGVDKAKIQEEITQLKDQLT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SF+GENWL+ DL + + V+ D +
Sbjct: 121 SIAEAASFSGENWLQADLSGGPVTKSVVGGFVRDSSGAVSVKKVDYSLNTDTVLFDTTGN 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T ++ + +
Sbjct: 181 TGILDKVYNVSQASVTLPVN---------------------------------------- 200
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
S Y +G +
Sbjct: 201 ----------VNGTTSEYTVGAYNVDDLIDASATFDGDYANVGAGALAGDYVKVQGSWVK 250
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+T +V T + +
Sbjct: 251 AVDVAATGQEVVYDDGTTKWGVDTTVTGAPATNVAAPASIATIDITIAAQAGNLDALIAG 310
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++E ++ + + A +GSISSRI LQ DF+ + D+++ GVGRLVDADM EST
Sbjct: 311 VDEALTDMTSA-------AASLGSISSRIDLQSDFVNKLSDSIDSGVGRLVDADMNEEST 363
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQTQQQLA+QALSI N+ + +LSLFR
Sbjct: 364 RLKALQTQQQLAIQALSIANSDSQNVLSLFR 394
>gi|168335505|ref|ZP_02693586.1| flagellin domain protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 411
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 56/451 (12%), Positives = 130/451 (28%), Gaps = 45/451 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A + L + + +++SSGLR++ A D+AA +I++ M++ L
Sbjct: 3 INTNLMAINAQRNLGVNQGDQGGIMEKLSSGLRINRAGDDAAGLAISEKMRNQIRGLQQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +S+ +++ ++ + D + + E QL +++
Sbjct: 63 SRNGEDGISLIQTAEGALSETHEMLKRMREMAIQSMNDTYTDEDRQKLNIEAQQLITEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + FN + L D + + S +++S
Sbjct: 123 GLAVKTEFNEQKLLTGDPTGKGLASVAAKRQSLTTALKSFYTKIGSAEAKLGSAYAVEAS 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + + + ++ +V S +++ A+
Sbjct: 183 TKMEQALQSVIDLEQKISALEIKAAGEVPPEGQHVLKSVSDLRISLAQREASIASMEAVA 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + A + + ++ T
Sbjct: 243 ANLKESAATLRASAVTIEAGLVTSCAKKLQATMNEKVGPNEFTFQVGANNGQTITLGIKA 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T + + +
Sbjct: 303 MDSTALGLQATKIDSTESAGIAL-----------------------------------IT 327
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ V + Q A ++ + + + ++ DADMA E
Sbjct: 328 IDAAVEIVSRQRAELGAVQNRLEHTVKNLDNTAXNL-------QAAESQIRDADMAXEMV 380
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q + L+ N ++L L +
Sbjct: 381 NLTRTNILSQASQSMLAQANQFPQQVLQLLQ 411
>gi|152980284|ref|YP_001353140.1| flagellin type B [Janthinobacterium sp. Marseille]
gi|151280361|gb|ABR88771.1| flagellin type B [Janthinobacterium sp. Marseille]
Length = 507
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 75/505 (14%), Positives = 154/505 (30%), Gaps = 54/505 (10%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN S++++ + L +L R+SSGLR++ A D+AA +I+ M S L+
Sbjct: 3 AVINTNISSLNSQRNLTASQSSLATSLQRLSSGLRINSAKDDAAGLAISDRMTSQINGLT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S A+ G+ A D++ ++ +D S+Q E+ QLQ +
Sbjct: 63 RAAQNANDGISMTQTAEGGLGTATDLLQRMRTLAVQAANGTNSASDRSSLQEEVAQLQQE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L +A + FNG+N L L ++ + + + + +
Sbjct: 123 LNRVANTTQFNGQNVLDGSLSNAQFQVGANANQTINFSIGNTQASAIGNNAIKTTATGNT 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
S + + + S F +A + + T
Sbjct: 183 SGASSFAGTVAGTIGVNQNAAQVLTVQGNGTTSTYSAAAGATAFAIAKGINSASGSTGVT 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
GS +P + + ++ +T
Sbjct: 243 ATATTTATMANFTAGTQSFTIQGAPKADGSANPVTVTATMATATDVGGLAAAINAQSGVT 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+++ K+ T T + + + + + A +
Sbjct: 303 GINAIADTSTGKISLTQGAGYDIGITNNLVANNSTTVQGSTGTAKALVRGALDAAAIGDS 362
Query: 359 LAMEEMVSF--------------------------------------------IDTQIKC 374
+ + ++F + ++
Sbjct: 363 MTVGGTLAFNSSGSFTVGTSVAGTIFTAAANSSALSSVASIDITKLTNGIPSGANDALQV 422
Query: 375 ATAA-------AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+A +G++ +R + + + R++DAD ASE+ L+ Q
Sbjct: 423 IDSALANISSSRASLGALQNRFTSVVSSLSTTSENLSAARSRILDADFASETANLTRGQI 482
Query: 428 QQQLAVQALSIVNNSTARILSLFRG 452
QQ L+ N+ +L+L RG
Sbjct: 483 LQQAGTAMLAQANSLPNGVLALLRG 507
>gi|28372324|dbj|BAC56987.1| flagellin [Campylobacter lari]
Length = 492
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 79/489 (16%), Positives = 148/489 (30%), Gaps = 41/489 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA +K+ +L
Sbjct: 4 INTNGASLNAQVNAGLNSRALDSSLARLSSGLRINSAADDASGLAIADSLKTQANSLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ +S + IA M + + ++ TIK K T + IQ EI +L +L
Sbjct: 64 INNANDANSMLQIADKAMDEQLKILDTIKVKATQAAQDGQTAKTRAMIQGEINKLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +S+NG+ L + I + + + + ++
Sbjct: 124 NIANTTSYNGKQLLSGSFANQQFQIGDKANQTVNATIGATNSAKIGQTRFETGSKISAAT 183
Query: 181 TDGTERYGLLDRN--------------------------HKIKVEPQVLKDIDVSVYDAS 214
G N + +
Sbjct: 184 NIGFTIKSYDGVNDYQIQAVAVSYSAGTGLGALAAEINKSSDITGVRATATVQTISSGTI 243
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
T +T + ++ I + +G S
Sbjct: 244 KTGTTGEDFSINGVIIGKVEVKDGDKDGALVSAINAKKDTTGVEASMVNGQLVLNSADGR 303
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP-- 332
+G S V A+ S S + G + S+ + +
Sbjct: 304 GIVLGGSLGTSLSGVVASANFGRLSLVKNDGSDIIISGTNASQLGIGSSATTAEATVNLE 363
Query: 333 ----------KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKI 382
+M T T ++ DT I I
Sbjct: 364 SIKGEISADIASAMGFNAMSTAATFGKKQTAGVTTLQGAMAVMDIADTAIANLDTIRANI 423
Query: 383 GSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNS 442
G+ ++I + I + + V+ ++ D D ASES S Q A++ N +
Sbjct: 424 GATQNQITSTINNISVTQVNVKAAESQIRDVDFASESANYSKANILAQSGSYAMAQANAA 483
Query: 443 TARILSLFR 451
+ +L L +
Sbjct: 484 SQNVLRLLQ 492
>gi|116563745|gb|ABJ99885.1| phase 1 flagellin [Salmonella enterica subsp. houtenae]
Length = 371
Score = 171 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 56/400 (14%), Positives = 110/400 (27%), Gaps = 32/400 (8%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ LS S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ G+D KSIQ EI Q +++ +A + FNG+ L D + A
Sbjct: 61 RVRELSVQAANGSNSGSDLKSIQDEIDQRLNEINRVAEQTDFNGKKVLSQDGQLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+D + + V
Sbjct: 121 NDGET----------------ITIDLQKIDKTELGLDKLDVTKGIATTVSSGASVVGDVK 164
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ + K D + + ++
Sbjct: 165 IKEADFKDAKTTGGPAADKLSLVKDDKGNYLVKDVTVTATPKYYAATVDNSTGEISFDSA 224
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + A A S K +D +
Sbjct: 225 KEVTLTGGAPAPSAVDTLSREVKFDGADLKADQSLVKYKDDKGKDLYAIQTLDKDGNATF 284
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + + ++ ID +K A ++G++
Sbjct: 285 KSVTFAADGKTTEGTAVALAAN-------------VDPLAKIDDALKTVDAFRSQLGAVQ 331
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+R + + + R+ D+D A+E + +S Q
Sbjct: 332 NRFESAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQ 371
>gi|304438231|ref|ZP_07398173.1| flagellin FlgL [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304368838|gb|EFM22521.1| flagellin FlgL [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 441
Score = 171 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 61/449 (13%), Positives = 144/449 (32%), Gaps = 11/449 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N SA++ L L +VSSG++++DA D+A+ ++I++ M+ +L
Sbjct: 4 VVKNNMSAVNTLNILNRNQSALAKSLQKVSSGMKINDAGDDASGYAISERMRVQIRSLDQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
G+S + A+ ++ ++++ T+K K + ++ ++ + I
Sbjct: 64 DKQNTQNGNSMMKTAEGAVASTVEILKTLKEKAINAANDTNTDEDRRTIQKEINQMVDQI 123
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ D ++ A + + + + L+ +
Sbjct: 124 DDNALATYNGKYLVDGSRNSIGTATCTTLTNSALSTAADWGSALTALQSRQNEGLNIQST 183
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + V + S+ + T K G A D++
Sbjct: 184 DNVTVSYVRQGKTYTTTFSVGTNTLSSIITKTAYNGTDSVKGTDLVGGTTAGAWIGLDKS 243
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
A + + ++ + + + I S+
Sbjct: 244 GNSVYTADNKTALSINSAGAGTSYQISAFTIGITDNTGALRKTANTRLDAFNERIRSENK 303
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
++ + + + D R S+ + +
Sbjct: 304 SEDNALVLQTGVRANQAIKVSMTDMR-----------SLALGMKGMDGAVISVQTQDKAN 352
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
++ ID+ ++ A IG++ +R+ + + V+ + DADMA E T
Sbjct: 353 AAINSIDSALQKALDEQANIGAVQTRLRYTASNLTTASENVQNSESTIRDADMAKEMTEY 412
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q A L+ N +++ +LSL R
Sbjct: 413 TKNNVLLQAAQSMLAQANQNSSAVLSLLR 441
>gi|116563859|gb|ABJ99942.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Albany]
Length = 371
Score = 171 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 67/400 (16%), Positives = 130/400 (32%), Gaps = 32/400 (8%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ LS S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ G+D KSIQ EI Q +++ +A + FNG+ L D G T +
Sbjct: 61 RVRELSVQAANGSNSGSDLKSIQDEIDQRLNEINRVAEQTDFNGKKVLSQD-GQLTIQVG 119
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + D + LD + + + G G + + +
Sbjct: 120 ANDGETITIDLQKIDKTELGLDKLDVTKGIATTVSSGASVVGDVKIKEADFKDAKTTGGP 179
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
T A K AT D + G + A +
Sbjct: 180 AADKLSLVKDDKGNYLVKDVTVTATPKYYAATVDNSTGEISFDSAKEVTLAGGAPAPSSV 239
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ S V ++ S + + + + A + + D ++T
Sbjct: 240 DTLSREVKFDGANLKADQSLVKYKDDKGKDLYAIQTLDKDGNATFKSVTFAADGKTTEGT 299
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + ++ ID +K A ++G++
Sbjct: 300 TVALAAN----------------------------VDPLAKIDDALKTVDAFRSQLGAVQ 331
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+R + + + R+ D+D A+E + +S Q
Sbjct: 332 NRFESAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQ 371
>gi|116563867|gb|ABJ99946.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Albany]
gi|116563869|gb|ABJ99947.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Albany]
Length = 371
Score = 171 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 68/400 (17%), Positives = 130/400 (32%), Gaps = 32/400 (8%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ LS S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ G+D KSIQ EI Q +++ +A + FNG+ L D G T +
Sbjct: 61 RVRELSVQAANGSNSGSDLKSIQDEIDQRLNEINRVAEQTDFNGKKVLSQD-GQLTIQVG 119
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + D + LD + + + G G + + +
Sbjct: 120 ANDGETITIDLQKIDKTELGLDKLDVTKGIATTVSSGASVVGDVKIKEADFKDAKTTGGP 179
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
T A K AT D + G + A T
Sbjct: 180 AADKLSLVKDDKGNYLVKDVTVTATPKYYAATVDNSTGEISFDSAKEVTLAGGAPAPSTV 239
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ S V ++ S + + + + A + + D ++T
Sbjct: 240 DTLSREVKFDGANLKADQSLVKYKDDKGKDLYAIQTLDKDGNATFKSVTFAADGKTTEGT 299
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + ++ ID +K A ++G++
Sbjct: 300 TVALAAN----------------------------VDPLAKIDDALKTVDAFRSQLGAVQ 331
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+R + + + R+ D+D A+E + +S Q
Sbjct: 332 NRFESAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQ 371
>gi|114762154|ref|ZP_01441622.1| flagellin protein [Pelagibaca bermudensis HTCC2601]
gi|114545178|gb|EAU48181.1| flagellin protein [Roseovarius sp. HTCC2601]
Length = 429
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 112/451 (24%), Positives = 182/451 (40%), Gaps = 22/451 (4%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ IN +L Q +S+G RV+DA DNAA W+I+++M++D
Sbjct: 1 MSSILTNNGAMVALQTLKSINSSLATTQGEISTGKRVADAKDNAAVWAISKVMEADVKGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+SD++ LG S V +A++ D+++ IK KI A E D IQ++I L+ Q+
Sbjct: 61 KGISDSLNLGESTVAVARSASETVTDLLTDIKGKIVAAQEENVDRAKIQTDIDALRDQID 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + FNG N L + I D + D + + + ++
Sbjct: 121 AVVGAAQFNGLNLLSNTDS----TADSGNINVLASLDRSGTGVAASDIAVAKQDLGTGAA 176
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ T + + V ++ FK+ +S + FD
Sbjct: 177 STATVNLDVSVNTTGVASGATAEYVTFDGVGADDELVAGANFKVTGSSNFAGDVSADAFD 236
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + + ++ S T+ G + + T
Sbjct: 237 FSADVEYVARDGDTLADVTSAMVERLNFQAASDGLEITFSVNGTNAGQIDFTNN------ 290
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
D S S +++
Sbjct: 291 ------------YDEAISDDNSVVEQSDIADIATLEAEADGTIGGGLELLAEFDVTTDDG 338
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + I+ ++ A +A GS+ RI Q DFI + D+++ G+G LVDADM S
Sbjct: 339 TDAALDSIEGLLQTAIDSASAFGSVQGRIETQTDFISSLIDSLKSGIGTLVDADMEEASA 398
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQ QQQL VQALSI N + +LSLF+
Sbjct: 399 RLQALQVQQQLGVQALSIANQAPQSLLSLFQ 429
>gi|313896999|ref|ZP_07830546.1| putative flagellin protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312974446|gb|EFR39914.1| putative flagellin protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 443
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 60/445 (13%), Positives = 139/445 (31%), Gaps = 9/445 (2%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N SA++ L +L +VSSG++++DA D+A+ ++I++ M+ +L+ +
Sbjct: 8 NMSAVNTLNILNKNQSSLAKSLQKVSSGMKINDAGDDASGYAISERMRVQIRSLNQDNQN 67
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGS 126
G+S + A+ +S ++++ T+K K + ++ ++ + I +
Sbjct: 68 TQNGNSMMKTAEGAVSSTVEILKTLKEKAINAANDTNTDEDRRTIQKEINQMVDQIDDNA 127
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
D ++ A S + + L+ +
Sbjct: 128 LATYNGKYLVDGSRNSIGTATCTTLSNSSLSTASKWTSKLTELESRTNEGLNVQSTDKVT 187
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+ + QV K S + A
Sbjct: 188 VSYVRQGKTYTTTFQVST---------YTMSDLLTAKAFNGSEGVDGTEFVDSAKVTAGA 238
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
I + + + S + + + N
Sbjct: 239 WIGLDKAGNSVYTADNKSALSISAKGAGTTYQVSSFTLSISDNTGAIRKTANTALDGFNE 298
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ + T T + + + + S+ + + + ++
Sbjct: 299 RIRAENKSDDNALTLQTGTKANQAIKVSMTDMRSLALGMKGTDGSVISVQTQDKANAAIN 358
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
I+T ++ A IG++ +R+ + + V+ + DADMA E T +
Sbjct: 359 AIETALQKALDEQANIGAVQTRLSYTSSNLTTASENVQNSESTIRDADMAKEMTEYTKNN 418
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
Q A L+ N +++ +LSL +
Sbjct: 419 VLLQAAQSMLAQANQNSSAVLSLLK 443
>gi|25992227|gb|AAN77107.1| flagellin [Escherichia coli]
Length = 452
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 65/452 (14%), Positives = 125/452 (27%), Gaps = 39/452 (8%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
+L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 SQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISVAQTTEG 60
Query: 80 GMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ + + I+ SIQ+EITQ ++ ++ + FNG L
Sbjct: 61 ALNEINNNLQRIRELSVQATNGTNSDSDLSSIQAEITQRLEEIDRVSEQTQFNGVKVLAE 120
Query: 137 DLGSSTASIAKSVIGSFIR-------------------------------DDNGKVQITT 165
+ A I G
Sbjct: 121 NNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATGSDLISKFKATGTDNYQI 180
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
V D + + + + A +
Sbjct: 181 NGTDNYTVNVDSGVVQDKDGKQVYVSTADGSLTTSSDTQFKIDATKLAVAAKDLAQGNKI 240
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
G AKG + + T S + + A T + ++
Sbjct: 241 VYEGIEFTNTGTVAIDAKGNGKLTANVDGKAVEFTIPGSTDTSDTSATVAPTTALYKNSA 300
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
+N + + K G+T K + + ++ L+
Sbjct: 301 GQLTATKVENKAATLSDLDLNAAKKTGSTLVVNGATYDVSADGKTITETASGNNKVMYLS 360
Query: 346 ITRHANTDAYNEKLA-----MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
+ + NE A + ID + +G++ +R +
Sbjct: 361 KSEGGSPILVNEDAAKSLQFTTNPLETIDKALAKVDNLRSDLGAVQNRFDFAITNLGNTV 420
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ + R+ DAD A+E + + Q QQ
Sbjct: 421 NNLFSARSRIEDADYATEVSNMFRAQILQQAG 452
>gi|320530505|ref|ZP_08031563.1| bacterial flagellin [Selenomonas artemidis F0399]
gi|320137338|gb|EFW29262.1| bacterial flagellin [Selenomonas artemidis F0399]
Length = 443
Score = 170 bits (429), Expect = 4e-40, Method: Composition-based stats.
Identities = 61/445 (13%), Positives = 140/445 (31%), Gaps = 9/445 (2%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N SA++ L +L +VSSG++++DA D+A+ ++I++ M+ +L+ +
Sbjct: 8 NMSAVNTLNILNKNQSSLAKSLQKVSSGMKINDAGDDASGYAISERMRVQIRSLNQDNQN 67
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGS 126
G+S + A+ +S ++++ T+K K + ++ ++ + I +
Sbjct: 68 TQNGNSMMKTAEGAVSSTVEILKTLKEKAINAANDTNTDEDRRTIQKEINQMVDQIDDNA 127
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
D ++ A S +T+ L+ +
Sbjct: 128 LATYNGKYLVDGSRNSIGTATCTTLSNSSLSTASKWGSTLTSLESRTNEGLNIQSTDKVT 187
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+ + QV K S + A
Sbjct: 188 VSYVRQGKTYTTTFQVST---------YTMSDLLTAKAFNGSEGIEGTEFVDSAKVTAGA 238
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
I + + + S + + + N
Sbjct: 239 WIGLDKAGNSVYTADNKSALSIGAKGAGTTYQVSSFTLSISDNTGAIRKTANTALDGFNE 298
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ + T T + + + + S+ + + + ++
Sbjct: 299 RIRAENKSADNALTLQTGTKANQAIKVSMTDMRSLALGMKGTDGSVISVQTQDKANAAIN 358
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
I+T ++ A IG++ +R+ + + V+ + DADMA E T +
Sbjct: 359 AIETALQKALDEQANIGAVQTRLSYTSSNLTTASENVQNSESTIRDADMAKEMTEYTKNN 418
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
Q A L+ N +++ +LSL +
Sbjct: 419 VLLQAAQSMLAQANQNSSAVLSLLK 443
>gi|307701407|ref|ZP_07638427.1| flagellin protein [Mobiluncus mulieris FB024-16]
gi|307613422|gb|EFN92671.1| flagellin protein [Mobiluncus mulieris FB024-16]
Length = 507
Score = 170 bits (429), Expect = 5e-40, Method: Composition-based stats.
Identities = 65/503 (12%), Positives = 138/503 (27%), Gaps = 75/503 (14%)
Query: 24 LEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSK 83
L +++SSG R++ AAD+AA +I++ ++S G G S V A+ +++
Sbjct: 5 LAKSLEKLSSGFRINRAADDAAGLAISEGLRSQVGGNRQAVRNAQDGISLVQTAEGALNE 64
Query: 84 AIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGS 140
++ ++ +I +E++QLQ +L I + ++FNG N L
Sbjct: 65 VHSILQRMRVLAVQGATDSNSPDARANINTELSQLQQELDRIGKVTNFNGTNLLDGSASG 124
Query: 141 ST---ASIAKSVIGS--------FIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGL 189
+ + + + + + +
Sbjct: 125 NQALKFQVGANGTENDRITVDLKDCDVTHVAKFNIEAPVSKVAKASADGLTKGKYTLNIE 184
Query: 190 LDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIP 249
+ ++ K + + + + +A AA + T
Sbjct: 185 GKTLEFELKDGKLTKADISKALEDAMKKANFEGYIAGGDQEVTNAAPVELSKKPAAGTYK 244
Query: 250 VPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + +G + S +A G + +AT ++ +D +
Sbjct: 245 FTIGGVEHTLDVKAGDAEQSSIIDRINAQLKGTGYDLTYDKATKLITLKADDNVKDVQKD 304
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
V + + E G + + + + M +D
Sbjct: 305 FKLEVPATVVDTTGAAGPKTATVFEGKIGINHGKGFKFEVEDGKITFSRADGKNMEVKLD 364
Query: 370 TQIKCATAAA-------------GKIGSISSRIHLQEDFIKLM----------------- 399
+ A AA G++ + + + +
Sbjct: 365 HSMVKAADAAPGTGDKAVELKALTSTGAVLANVSDYTENVTNAYLTVKDHDSAQKLIDVL 424
Query: 400 ---RDAVEKGVGRL----------------------------VDADMASESTRLSALQTQ 428
+V L D DMA E + + Q
Sbjct: 425 DGKIRSVSTARSNLGAIQNRFEHTITNLNVAVENLAASESRIRDTDMAQEMMQFTRNQIL 484
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 485 SQAGTSMLAQANQVPQGVLSLLR 507
>gi|40353143|emb|CAD99229.1| flagellin [Escherichia coli]
Length = 453
Score = 170 bits (429), Expect = 5e-40, Method: Composition-based stats.
Identities = 61/453 (13%), Positives = 124/453 (27%), Gaps = 40/453 (8%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
+ L +L +R+SSGLR++ A D+AA +IA ++ L+ S G
Sbjct: 1 LLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSS 127
S + +++ + + I+ SIQ+EITQ ++ ++ +
Sbjct: 61 ISVAQTTEGALNEINNNLQRIRELSVQATNGTNSDSDLSSIQAEITQRLEEIDRVSEQTQ 120
Query: 128 FNGENWLRTDLGSSTA---------------------------------SIAKSVIGSFI 154
FNG L + + +I F
Sbjct: 121 FNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATGSDLISKFK 180
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
+ Y ++ E+ + + + D + + +V + + A
Sbjct: 181 ATGTDNYDVGGKTYTVNVESGAVKNDANKDVFVSAADGSLTTSSDTKVSGESIDATELAK 240
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
I G A G + + S ++
Sbjct: 241 LAIKLADKGSIEYKGITFTNNTGAELDANGKGVLTANIDGQDVQFTIDSNAPTGAGATIT 300
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T N+ T + + D +
Sbjct: 301 TDTAVYKNSAGQFTTTKVENKAATLSDLDLNAAKKTGSTLVVNGATYNVSADGKTVTDTT 360
Query: 335 I----DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
S N DA + + ID + +G++ +R
Sbjct: 361 PGAPKVMYLSKSEGGSPILVNEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGAVQNRFD 420
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ + + R+ DAD A+E + +S
Sbjct: 421 SAITNLGNTVNNLSSARSRIEDADYATEVSNMS 453
>gi|291527647|emb|CBK93233.1| Flagellin and related hook-associated proteins [Eubacterium rectale
M104/1]
Length = 428
Score = 170 bits (429), Expect = 5e-40, Method: Composition-based stats.
Identities = 58/428 (13%), Positives = 120/428 (28%), Gaps = 29/428 (6%)
Query: 53 MKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQ 109
M+ L S G S V A+ +++ ++ + T TD K+IQ
Sbjct: 1 MRKQIKGLDRASTNAEDGVSAVQTAEGALTEVHSMLQRMNELATQSANGTNSNTDRKAIQ 60
Query: 110 SEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
EI QL +++ ++ + FN L+ D ++ G + K T
Sbjct: 61 DEIDQLTTEIDRVSETTKFNETYLLKGDGSEKAHNVNAHDAGLDGVTLDDKGNGTVAVTL 120
Query: 170 LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
+ S G ++ V K V V D +
Sbjct: 121 KSLKGGDKISIAGKNYTIGSTAQDVIDAVGAAPTKGAKVKVGDTEYVYDDGTTTDKNSVT 180
Query: 230 AWLKAANATFDQAKGIATIPVP-----------------------LPAAPAAPNTTSGTS 266
+ + A A ++
Sbjct: 181 IDAGWYVSGTNFKNSAKVDLTAKTINDLATAGSKVTVGSKTFAIINDANTADGIDDKDST 240
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ T + S I N+ ++ Y +T N ++ + +
Sbjct: 241 VITAGKAYQLQTAEIVKASSIGADTAATNATNANDAYNTATTTFTLNKGTVSYKDALSFN 300
Query: 327 SRKDLPKEIDSGYSMVTLNITRHA---NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
++ + ++ ++ + + + I I ++ +G
Sbjct: 301 LHVGADADMTNKIAVNIDSMNSAGLGIKGIKADTEQDATYAIDAIADAISTVSSQRSALG 360
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
++ +R+ + + + + R+ D DMA E S Q L+ N S
Sbjct: 361 AVQNRLEHTINNLDNVVENTTSAESRIRDTDMAEEMVNYSKNNILAQAGQSMLAQANQSN 420
Query: 444 ARILSLFR 451
+LSL +
Sbjct: 421 QGVLSLLQ 428
>gi|238927674|ref|ZP_04659434.1| flagellin [Selenomonas flueggei ATCC 43531]
gi|238884390|gb|EEQ48028.1| flagellin [Selenomonas flueggei ATCC 43531]
Length = 441
Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats.
Identities = 62/449 (13%), Positives = 148/449 (32%), Gaps = 11/449 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N SA++ L L +VSSG++++DA D+A+ ++I++ M+ +L
Sbjct: 4 VVKNNMSAVNTLNILNKNQSALAKSLQKVSSGMKINDAGDDASGYAISERMRVQIRSLDQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
+ G+S + A+ ++ ++++ T+K K + ++ ++ + I
Sbjct: 64 DNQNTQNGNSMMKTAEGAVASTVEILKTLKEKAINAANDTNTDEDRRTIQKEINQMVDQI 123
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ D ++ A S + + + L+ +
Sbjct: 124 DDNALATYNGKYLVDGSRNSVGTATCTTLSNSALSTAAAWGSALTALQSRQNESLNIQST 183
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + V + + + + K + G + A FD+A
Sbjct: 184 DNVTVSYVRQGKTYTTTFSVGTNTLSDIIGKTAFNGSDSVKGSDLVGGSTQGAWIGFDKA 243
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
A T + ++ + + + I ++
Sbjct: 244 GNSVYTADNKTALSVNAAGAGTTFQISAFTIGITDNTGALRKTANTALDAFNERIRAENK 303
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
++ + + + D R S+ + + +
Sbjct: 304 SEDNALVLQTGVRANQAIKVSMTDMR-----------SLALGMKGTDGSVISVQTQEKAN 352
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
++ ID+ ++ A IG++ +R+ + + V+ + DADMA E T
Sbjct: 353 AAINSIDSALQKALDEQANIGAVQTRLRYTSSNLTTASENVQNSESTIRDADMAKEMTEY 412
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q A L+ N +++ +LSL R
Sbjct: 413 TKNNVLLQAAQSMLAQANQNSSAVLSLLR 441
>gi|239996310|ref|ZP_04716834.1| putative flagellin [Alteromonas macleodii ATCC 27126]
Length = 449
Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats.
Identities = 57/442 (12%), Positives = 136/442 (30%), Gaps = 13/442 (2%)
Query: 15 QKLRDI---NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
Q L + L +R+SSGLR++ AAD++A I+ + S++ A + + G
Sbjct: 9 QSLSSNPVFSKTLSTAYERLSSGLRINSAADDSAGLQISNRLTSESIAKDQLRRNLNDGI 68
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLRDIARGSSF 128
S IA+ G+ ++ D++ ++ D +++ E QL++ L IA +
Sbjct: 69 SYAQIAEGGLQESADILQRMRQLAMQSQNGINTDADRRALDKEFQQLKNALNGIAYNTEA 128
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
L D + +++ Y+ + + + D
Sbjct: 129 FNRLPLLGDNDLLSDNVSSIGDTFVKGSPTRLNSGLRSIAYIPAGSTNISINIDSFSLDD 188
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
L D + + L + + +
Sbjct: 189 DLQVFTTSGRHLVGTPLSDNVWSINGVSSGSDIKSLLFLTQEGYTPTTGYDGSSLITSGS 248
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
+++ ++ + + + V T + T T
Sbjct: 249 GTINGTTFTFSGDQHPGVTTETLTIDNTNEPLIISVVGQGVFDATVDWDTLGAAGTGGNS 308
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ G + +L K + + E + I
Sbjct: 309 FEAGPVDITATNSLSEGTDYINLAKTPVGLSDLNMVESD-------VLTFENAEVALQQI 361
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D ++ + + G+ +++ M + + +++D D A+E+ + + Q
Sbjct: 362 DDALEYVSESRAFYGAKMNQMESALKVNDRMHEGLMAARSQILDTDFAAETAKSTQAQIV 421
Query: 429 QQLAVQALSIVNNSTARILSLF 450
+Q ++ + +S ++L L
Sbjct: 422 EQASISVRAQAKSSDDQVLGLL 443
>gi|238798564|ref|ZP_04642041.1| Flagellin [Yersinia mollaretii ATCC 43969]
gi|238717584|gb|EEQ09423.1| Flagellin [Yersinia mollaretii ATCC 43969]
Length = 382
Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats.
Identities = 64/438 (14%), Positives = 121/438 (27%), Gaps = 59/438 (13%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDI 76
+ L +R+SSGLR++ A D+AA +IA S+ L+ + G S
Sbjct: 1 MTKSQSALGSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQT 60
Query: 77 AKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
+ +++ + + ++ +D SIQ EI ++ ++ + FNG
Sbjct: 61 TEGALNEINNNLQRVRELTVQASTGSNSTSDLSSIQDEIQLRLDEIDRVSAQTQFNGVKV 120
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
L TD S A I + ++ + ++T
Sbjct: 121 LSTDTKMSIQVGANDNETIDISLKEVTSKTLNLEGFNVTGPKGGSAATALAAADFQKAFG 180
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
V + + ++ +A T K
Sbjct: 181 STTAVTTATSAEKTPGDLASRLGVAAASVTVAGAPTKDSAGNWFTKVDIKANDATEANNL 240
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
A + T +A + T+ S+ +
Sbjct: 241 KANGFDIASGATKSFYIAVDPQTADTTTTAGTAAIAIDTSSLSLKKLTTGATNDPL---- 296
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
A++ +S ID
Sbjct: 297 ---------------------------------------------KALDAAISDID---- 307
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ +R + + + R+ DAD A+E + +S Q QQ
Sbjct: 308 ---VQRSSLGAVQNRFQSTVTNLNNTVNNLTAAQSRIQDADYATEVSNMSRAQILQQAGT 364
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 365 SVLAQANQVPQTVLSLLR 382
>gi|37651054|emb|CAD97428.1| flagellin [Escherichia coli]
gi|37651056|emb|CAD97429.1| flagellin [Escherichia coli]
Length = 408
Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats.
Identities = 66/420 (15%), Positives = 126/420 (30%), Gaps = 16/420 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 2 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 62 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ L
Sbjct: 122 DRVSGQTQFNGVNVLSKDGSMKIQVGANDGQTISIDLKKI-------------DSSTLGL 168
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + L N + + + + KL + + L N
Sbjct: 169 NGFSVSKNSLNVSNAITSIPQDAGDKPVDVNFGTTTESAAIAAKLGVSDTSSLSLHNILD 228
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
K A V A + + + ++ + G D
Sbjct: 229 KDGKATADYVVQSGKDFYAASVDAASGKVTLNTIDVTYDDYANGVDDAKQTDQLIKVSAD 288
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G V G + D + L + + N E
Sbjct: 289 KDGAAQGFVTLQGKNYSAGDAAVILKNGATGLALTDLNLSDVTDTNGKVTTTATEQFEGA 348
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ E+ ++ +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 349 STEDPLALLDKAIASVDKFRSSLGAVQNRLDSAITNLNNTTTNLSEAQSRIQDADYATEV 408
>gi|312962286|ref|ZP_07776777.1| flagellin type B [Pseudomonas fluorescens WH6]
gi|311283213|gb|EFQ61803.1| flagellin type B [Pseudomonas fluorescens WH6]
Length = 481
Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats.
Identities = 73/479 (15%), Positives = 149/479 (31%), Gaps = 29/479 (6%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ L + L+ R+SSGLR++ A D+AA I+ + S L
Sbjct: 3 LTVNTNLASLTVQNNLNKASGALQTSMQRLSSGLRINSAKDDAAGLQISNRLTSQINGLG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
GSS A+ M ++ +++ +++ D KS Q++ L ++
Sbjct: 63 VAIKNANDGSSIAQTAEGAMQQSTNILQSMRTLALQSANGSPSAEDRKSNQAQYAALTAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA ++F G+N L G+++ + + + L + V
Sbjct: 123 LTRIATTTTFGGKNLLDGSFGTTSFQVGANANQTIDMSIGNVAANNIGSQQLKSQGVAPS 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ + + +G + +TT+ + A
Sbjct: 183 ATGVAGGAIDVTGGGQSKSLTIAAGASAKQIAAQMNGAVGGLAATASTTAQFTVDATAIA 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ TS + +A N D A + S T
Sbjct: 243 AATPASANFTLQVGSGTAVQFTGVTSTSDLADQLKSNAAKLGISVNYDSTTNALSVKSDT 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD--------------------------LP 332
+ N+ A + T
Sbjct: 303 GENLTFNAGDAGAIAGVKVATLDGTGTAGTAVALAATAIIATGAVSLNSSSSYSLSGVGV 362
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + N + + I I + +G++ +R
Sbjct: 363 TGLFAAAGTAANSTKTTVNNTDITSAANAQNSIDVITQAISDIDSQRAGLGAVQNRFDNT 422
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + D G++ D D A+E+ +L+ QT QQ + LS N + +L L +
Sbjct: 423 VANLQSIADNSSAARGQIQDVDYAAETAQLTKQQTLQQASTAILSQANQLPSAVLKLLQ 481
>gi|229541548|ref|ZP_04430608.1| flagellin domain protein [Bacillus coagulans 36D1]
gi|229325968|gb|EEN91643.1| flagellin domain protein [Bacillus coagulans 36D1]
Length = 423
Score = 169 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 64/428 (14%), Positives = 133/428 (31%), Gaps = 33/428 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ L ++SSGLR++ AAD+AA +I++ M+S L
Sbjct: 3 INHNIAALNTLNHLNAATNAQSKAMQKLSSGLRINGAADDAAGLAISEKMRSQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ +S + A+ +++ D++ ++ D ++IQSE++QL+S++
Sbjct: 63 TKNAQDATSLLQTAEGALNETHDILQRMRELAVQSSNDTNTDDDRQNIQSEMSQLESEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN +N L +G + + S I G+ + + T L D
Sbjct: 123 RIGNTTQFNTKNLLDGSMGKAVTEAVANENTSGIFKVKGETDTSLLSDTNALLTNLTDKD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ +
Sbjct: 183 GNSLGITAGDKITVTYVKNGTTT------------------------------TYTVDVE 212
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
++ I + T+ + +AA I + KN
Sbjct: 213 DGTKLSNIDGSDTDGSGKKLDGTLTAKDGALILAADEAGTANAIEGITITVQDKNGNVRT 272
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ K V ++ + + + + +
Sbjct: 273 AATNALSSFKETKAAADVRSDGSATFLIGANGGQNLQVDINDMRAQALGVSGLQVSTQTQ 332
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ID I+ +A GK+G+ +R+ + + + + R+ D DMA E +
Sbjct: 333 ANAAIKVIDNAIQKVSAERGKLGAFENRLDHTVNNLSTSSENLTSAESRIRDVDMAKEMS 392
Query: 421 RLSALQTQ 428
+
Sbjct: 393 EQTKQSIL 400
>gi|300117318|ref|ZP_07055108.1| flagellin [Bacillus cereus SJ1]
gi|298725153|gb|EFI65805.1| flagellin [Bacillus cereus SJ1]
Length = 397
Score = 169 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 58/448 (12%), Positives = 136/448 (30%), Gaps = 53/448 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
++ G S + A + M+ +++ +++ K+ + L + +
Sbjct: 63 ANNTQDGISLIRTADSAMNSVSNILLRMRDLANQSANGTNTDKNQAA----LNKEFDALK 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N D
Sbjct: 119 EQINYISTNTEFND---------------------------------------------- 132
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
LLD ++K + + + + ++ K + A +
Sbjct: 133 ---KKLLDGSNKSIAIQTLDNADTNKQININLSNTSTKALEIDSLTISGSTPIAGQNSTS 189
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
I + + T + + + +G S T N +
Sbjct: 190 KITAEQLEAAKSDIEAFTKAQEKLANLTEGTDDGSGTMVGASSAEDMKTAVNEFKAAFEK 249
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
++ T + + + T+ T K +
Sbjct: 250 MKPLMSDADITTVQTKIDEFKEATPTLKAAQDMGKAFTKTMEPTVDKEITKAATKPNASD 309
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ ID + + +G+ +R+ + +K ++ ++ DADMA E + ++
Sbjct: 310 AIAAIDKALTTVADSRATLGATLNRLDFNVNNLKSQASSMASAASQIEDADMAKEMSEMT 369
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + LS N + + L +
Sbjct: 370 KFKILNEAGISMLSQANQTPQMVSKLLQ 397
>gi|83815501|ref|YP_446728.1| flagellin [Salinibacter ruber DSM 13855]
gi|83756895|gb|ABC45008.1| flagellin [Salinibacter ruber DSM 13855]
Length = 414
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 71/453 (15%), Positives = 159/453 (35%), Gaps = 46/453 (10%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I TN A A Q L D + L ++R+++GLR++ A+D+AA + IA+ +++ G+
Sbjct: 5 SQINTNIQAQQAFQNLSDTSEQLAETRERLTTGLRINSASDDAAGFEIAEGLEARTGSQQ 64
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQS---Q 118
IG S + +A+ G+ ++++ + + K + +LQ +
Sbjct: 65 QALRNIGDAKSALSVAEGGLDSQLNILQSAREKAVQAANGSLSQNERNAIAGELQEQVGE 124
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ DIA+ ++FNG+ + + + + D D
Sbjct: 125 INDIAKNTTFNGDKLIEGGTSGDSGNSVGLTFQTGSESDQTFDVNIENSTAEDLGVQSNL 184
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
T + + + +
Sbjct: 185 DVTTTDGQDVSAGDFTRSQAVTAASGN--------------------------------- 211
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
P + T G + + + ++ ++ S + T
Sbjct: 212 ----------ISPSASGTNLAGTLEGGTFDVTVERSGTSLTLKANGSTVSAAGTNGGGNG 261
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ G T+ T++ + + + + D+ +S+ + +
Sbjct: 262 TFTGSTSVTLSSDTSGNKIALNVTELSVRKGDITDGGSKDFSVQVRDSENIGSRLQGGSS 321
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
E+++ +D+ I T+ +G+ +R+ +E ++ + ++ R+ DAD A E
Sbjct: 322 DEAREIINDVDSAINSLTSQLSDLGASQNRLSFKESNLETSQTNLQAAQSRIQDADFAKE 381
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
T+ + LQ QQQ L+ N + +LSL +
Sbjct: 382 QTQAAKLQVQQQSGTAQLAQANAAGQSVLSLLQ 414
>gi|16226013|gb|AAL16054.1|AF420426_1 phase-1 flagellin [Salmonella enterica subsp. enterica]
Length = 455
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 62/455 (13%), Positives = 122/455 (26%), Gaps = 41/455 (9%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
L +R+SSGLR++ A D+AA +IA ++ L+ S G S
Sbjct: 1 NKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTT 60
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ +++ + + ++ SIQ+EITQ +++ ++ + FNG L
Sbjct: 61 EGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVL 120
Query: 135 RTDLGSSTASIAK----------SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
D + A + + D VQ S
Sbjct: 121 AQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSDTAATVTGYTDSATAI 180
Query: 185 ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKG 244
++ + P + D+ AA+
Sbjct: 181 DKSTFAASATTLGGTPAITGDLKFDDTTGKYYADVSGTTAKDGVYEVTVAADGKVTLTGT 240
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS------------------- 285
+ A + + + A +A +
Sbjct: 241 PTGPITAGFPSTATKDVKQTQQENADLTEAKAALTAAGVAAAGTASVVKMSYTDNNGKTI 300
Query: 286 ---------DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
D + AT + T T + +
Sbjct: 301 DGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKT 360
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
S + + A E + ID + +G++ +R + +
Sbjct: 361 YAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNL 420
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ + R+ D+D A+E + +S Q QQ
Sbjct: 421 GNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQA 455
>gi|227876875|ref|ZP_03994982.1| flagellin [Mobiluncus mulieris ATCC 35243]
gi|307701859|ref|ZP_07638871.1| putative flagellin D [Mobiluncus mulieris FB024-16]
gi|227842538|gb|EEJ52740.1| flagellin [Mobiluncus mulieris ATCC 35243]
gi|307612955|gb|EFN92212.1| putative flagellin D [Mobiluncus mulieris FB024-16]
Length = 559
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 70/524 (13%), Positives = 147/524 (28%), Gaps = 73/524 (13%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M+ SI N AM++ + L L +++SSG R++ AAD+AA +I++ +++ G
Sbjct: 36 MSLSINQNIMAMNSYRNLSVTQGGLAKSLEKLSSGFRINRAADDAAGLAISEGLRTQVGG 95
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQ 116
G S V A+ +++ ++ ++ ++I +E++QL+
Sbjct: 96 NRQAVRNAQDGISLVQTAEGALNEVHSILQRMRVLAVQGATDSNSPDARRNINTELSQLR 155
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTA--SIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
+L+ I ++FNG + L + A + + R
Sbjct: 156 DELQRIGSVTNFNGTSLLNGKASGNDALKFQVGANGNADNRIVVDLRDADVTAVAKFSGI 215
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ S+T+ T + ++++ +VL + A+ KK A +
Sbjct: 216 KKVTSATELTAGAAFDKGKYALELDGKVLNLDFSAAKPANEKEVQKKLAEALKASGIEGY 275
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
T + A A T S A G + +
Sbjct: 276 VGGTTNVAASGAVTDFDKAVLDGKTFTLKVGEHEISVDAKTLADGTHQGATPQRLVDVFN 335
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA 354
+ + + + + K
Sbjct: 336 QELGKKGLNYTMSYGDADGFKITANDSESAQVTVKLTTDASGIKVGGKDTTTLLDDRVGK 395
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAA---------GKIGSISSR----------------- 388
E+ + + IK A K+G+ ++
Sbjct: 396 PKGAGYALEVGNDLTLHIKRADGGRIDKIGAHNLTKLGATANTGDTDVAFTATGETADVA 455
Query: 389 --------------------IHLQEDFIKLMRDAVEKGVGR----LVDADMA-------- 416
+ + + R + R + + ++A
Sbjct: 456 TDYNYLTVDSHDAAQNLINVLDAKIQSVSTARANLGAVQNRFEHTITNLNVAVENLAASE 515
Query: 417 ---------SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + + Q Q L+ N +LSL R
Sbjct: 516 SRVRDTDMAQEMMQFTRNQILSQAGTSMLAQANQVPQGVLSLLR 559
>gi|332142179|ref|YP_004427917.1| putative flagellin [Alteromonas macleodii str. 'Deep ecotype']
gi|327552201|gb|AEA98919.1| putative flagellin [Alteromonas macleodii str. 'Deep ecotype']
Length = 449
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 55/442 (12%), Positives = 132/442 (29%), Gaps = 13/442 (2%)
Query: 15 QKLRDI---NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
Q L + L +R+SSGLR++ A D++A I+ + S++ A + + + G
Sbjct: 9 QSLSSNPVFSKTLSTAYERLSSGLRINSAVDDSAGLQISNRLTSESIAKNQLRRNLNDGI 68
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLRDIARGSSF 128
S IA+ G+ ++ D++ ++ D +++ E QL++ L IA +
Sbjct: 69 SYAQIAEGGLQESADILQRMRQLAMQSQNGINTDADRRALDKEFQQLKNALNGIAYNTEA 128
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
L D + +++ Y+ + + + D
Sbjct: 129 FNRLPLLGDNDLLSDNVSSIGDTFVKGIPTRLNSGLRSIAYIPAGSTNISINIDSFSLDD 188
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
L D + L + + +
Sbjct: 189 DLQVFTTSGRHLVGTPLSDNVWSINGVGSGSDIKSLLFLTQEGYTPTASYDSSSLITNGS 248
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
+++ ++ + + + V T + T +
Sbjct: 249 GTINGTTFTFSGDQHPGVTTETLTIDNTNEPLIISVVGQGVFDATVDWDTLGSPGSGGNS 308
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ G + +L K + + E + I
Sbjct: 309 FEAGPVDITATNSLSEGTDYINLAKTPVGLSDLNMVESD-------VLTFENAEVSLQQI 361
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + + + G+ +++ M + + +++D D A E+ + + Q
Sbjct: 362 DDALAYVSESRAFYGAKMNQMESALKLNDRMHEGLMAARSQILDTDFAEETAKSTQAQIV 421
Query: 429 QQLAVQALSIVNNSTARILSLF 450
+Q ++ +S ++L L
Sbjct: 422 EQASISVRVQAKSSDEQVLGLL 443
>gi|86211136|gb|ABC87265.1| flagellin [Xanthomonas campestris pv. campestris]
Length = 399
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 58/452 (12%), Positives = 133/452 (29%), Gaps = 59/452 (13%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + +++ R+SSGLR++ A D+AA +I++ + L
Sbjct: 4 VINTNVMSLNAQRNLNTSSASMQTSIQRLSSGLRINSAKDDAAGLAISERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S A+ M + + I+ +D ++ SE+ QL +++
Sbjct: 64 ASRNANDGISLAQTAEGAMVEIGSNLQRIRELSVQSSNATNSASDRDALNSEVKQLTAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A ++FNG L D + + + + + ++ V
Sbjct: 124 DRVANQTNFNGTKLLNGDFSGALFQVGADAGQTIGINSIVDANVDSLGKANFAAAVSGAG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G + +
Sbjct: 184 VSGTATASGSVTGISLSFND---------------------------------------- 203
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + G + + A I + A+ K T
Sbjct: 204 ---------STGSAKSVTIADVKVGAGDTAADVNKKVAAAINDKLDQTGMYASIKADGTM 254
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + T+ + + ++ + +
Sbjct: 255 QIESLKAGQDFTSLSAGTSSAAGITVGAGLTTASAASGSTASTLSSLDISTFSGSQKALE 314
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+++ ++ +++ A + S + + + + R+ D D A E+
Sbjct: 315 IVDKALTAVNSSRADMGAVQNRFTSTIANLSATSENLS-------ASRSRIRDTDYAKET 367
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ L+ + +LSL +
Sbjct: 368 AELTRTQILQQAGTAMLAQAKSVPQNVLSLLQ 399
>gi|59044701|gb|AAW84044.1| FliC [Escherichia coli]
Length = 445
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 59/446 (13%), Positives = 131/446 (29%), Gaps = 37/446 (8%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N ++ L +L +R+SSGLR++ A D+AA +IA ++ L+ S
Sbjct: 1 NSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRN 60
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIA 123
G S + +++ + + ++ SIQ+EIT+ ++ ++
Sbjct: 61 ANDGISFAQTTEGALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITKRLEEIDRVS 120
Query: 124 RGSSFNGENWLRTDLGSSTA---------------------------------SIAKSVI 150
+ FNG L + + +I
Sbjct: 121 EQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATGSDLI 180
Query: 151 GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
F + Y ++ ++ + +T D + K + + +
Sbjct: 181 SKFKATGTDNYDVGGDAYTVNVDSGAVKDTTGNDIFVSAADGSLTTKSDTNIAGTGIDAT 240
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
A+ + + T +G A G+ + + + + +
Sbjct: 241 ALAAAAKNKAQNDKFTFNGVEFTTTTAADGNGNGVYSAEIDGKSVTFTVTDADKKASLIT 300
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ + + +A T + + + + V Y V + T+
Sbjct: 301 SETVYKNSAGLYTTTKVDNKAATLSDLDLNAAKKTGSTLVVNGATYDVSADGKTITE-TA 359
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
S N DA + + ID + +G++ +R
Sbjct: 360 SGNNKVMYLSKSEGGSPILVNEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGAVQNRFD 419
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + + R+ DAD A
Sbjct: 420 SAITNLGNTVNNLSSARSRIEDADYA 445
>gi|59044663|gb|AAW84025.1| FliC [Escherichia coli ETEC H10407]
gi|59044665|gb|AAW84026.1| FliC [Escherichia coli]
gi|59044667|gb|AAW84027.1| FliC [Escherichia coli]
gi|59044669|gb|AAW84028.1| FliC [Escherichia coli]
gi|59044671|gb|AAW84029.1| FliC [Escherichia coli]
gi|59044673|gb|AAW84030.1| FliC [Escherichia coli]
gi|59044675|gb|AAW84031.1| FliC [Escherichia coli]
gi|59044677|gb|AAW84032.1| FliC [Escherichia coli]
gi|59044679|gb|AAW84033.1| FliC [Escherichia coli]
gi|59044681|gb|AAW84034.1| FliC [Escherichia coli]
gi|59044683|gb|AAW84035.1| FliC [Escherichia coli]
gi|59044685|gb|AAW84036.1| FliC [Escherichia coli]
gi|59044687|gb|AAW84037.1| FliC [Escherichia coli]
gi|59044689|gb|AAW84038.1| FliC [Escherichia coli]
gi|59044691|gb|AAW84039.1| FliC [Escherichia coli]
gi|59044693|gb|AAW84040.1| FliC [Escherichia coli]
gi|59044695|gb|AAW84041.1| FliC [Escherichia coli]
gi|59044699|gb|AAW84043.1| FliC [Escherichia coli]
Length = 445
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 60/446 (13%), Positives = 131/446 (29%), Gaps = 37/446 (8%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N ++ L +L +R+SSGLR++ A D+AA +IA ++ L+ S
Sbjct: 1 NSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRN 60
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIA 123
G S + +++ + + ++ SIQ+EITQ ++ ++
Sbjct: 61 ANDGISVAQTTEGALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEIDRVS 120
Query: 124 RGSSFNGENWLRTDLGSSTA---------------------------------SIAKSVI 150
+ FNG L + + +I
Sbjct: 121 EQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATGSDLI 180
Query: 151 GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
F + Y ++ ++ + +T D + K + + +
Sbjct: 181 SKFKATGTDNYDVGGDAYTVNVDSGAVKDTTGNDIFVSAADGSLTTKSDTNIAGTGIDAT 240
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
A+ + + T +G A G+ + + + + +
Sbjct: 241 ALAAAAKNKAQNDKFTFNGVEFTTTTAADGNGNGVYSAEIDGKSVTFTVTDADKKASLIT 300
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ + + +A T + + + + V Y V + T+
Sbjct: 301 SETVYKNSAGLYTTTKVDNKAATLSDLDLNAAKKTGSTLVVNGATYDVSADGKTITE-TA 359
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
S N DA + + ID + +G++ +R
Sbjct: 360 SGNNKVMYLSKSEGGSPILVNEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGAVQNRFD 419
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + + R+ DAD A
Sbjct: 420 SAITNLGNTVNNLSSARSRIEDADYA 445
>gi|126730144|ref|ZP_01745956.1| flagellin protein [Sagittula stellata E-37]
gi|126709524|gb|EBA08578.1| flagellin protein [Sagittula stellata E-37]
Length = 480
Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats.
Identities = 113/451 (25%), Positives = 184/451 (40%), Gaps = 18/451 (3%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ IN L Q+++S+G RVS A DN+A W+I+++M++D
Sbjct: 48 MSSILTNNGAMVALQTLKTINSRLSQTQEQISTGKRVSTAKDNSAVWAISKVMEADVKGF 107
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+SD++ LG S V +A+ ++++ IK K+ A E D IQ +I+ L+ Q+
Sbjct: 108 KGISDSLNLGQSTVSVARQAAETVSELLTDIKGKVVAAQEENVDRDKIQDDISALRDQIA 167
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + FNG N L + +I D +T D + + + SS
Sbjct: 168 AVVGAAQFNGLNLLSNTS----LTAGSGIINILSSLDRSGDGVTASDISVRKQDLGTGSS 223
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ G L N+ + + + + T +T +T + +
Sbjct: 224 SIGATLTALTGANNDVTGDGDGAAFVMTGNNTTAPTGTTTFGTASTDTVVAGTGFSIAIT 283
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
G + T +AA+ + +
Sbjct: 284 GTAGNGLAATTDRNDISYVARDGDTMAEVVAGLAAAFNSYATADLGTDIGTVGAVVQNG- 342
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T D+ + D+ + V + +
Sbjct: 343 -------------NEIVFTGHQVTGDNFSYTLNQYDTDATTVIGGKLEALSDIDVTTQTG 389
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ++ I+ I+ A +A GS RI Q DFI + DA++ G+G L+DADM S
Sbjct: 390 ADSALTDIEGLIQIAIDSASAFGSAQGRIETQTDFISGLTDALKSGIGTLIDADMEEASA 449
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQ QQQL VQALSI N + +LSLF+
Sbjct: 450 RLQALQVQQQLGVQALSIANQAPQSLLSLFQ 480
>gi|113911627|gb|ABI48295.1| Fla3 flagellin [Roseburia intestinalis]
Length = 445
Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats.
Identities = 60/445 (13%), Positives = 115/445 (25%), Gaps = 44/445 (9%)
Query: 51 QIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT----DSK 106
+ M+ L S G S V A+ +++ ++ + D K
Sbjct: 1 EKMRKQIRGLDKASSNAQDGVSSVQTAEGALTEVHSMLQRMNELAVQAANGTNSKDTDRK 60
Query: 107 SIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTI 166
+IQ EI QL +++ +A + FN L+ D G T ++ G + T
Sbjct: 61 AIQDEIDQLNTEIDRVAETTKFNEIYLLKGDDGEKTINMKAHDAGLKGTLTDNGDGTATF 120
Query: 167 DYYL---------------------------DPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ K V
Sbjct: 121 KMDALKAGDKVSIGGQTFSIGASTKELKDMLTTADIDTKHQDVVVNGDTYKYVAAKAAVT 180
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
D + + + G + + AA + G + + A
Sbjct: 181 TGTKADGNAAGWYKDGVVPADTGTGIVADADYADAAEFSTKVTSGTVKVGTKELSLIADN 240
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ +K+ A + + + N T + N ++
Sbjct: 241 DGDGVDDNNKNVISKEKAYSLAAAELLKANQIGDTQNQAKVGIDKNYTAMTLANATNTIE 300
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK-------------LAMEEMVS 366
+ T L + G N + A +
Sbjct: 301 IHTGTAKVANTLSFSLHVGADADMTNKITVDIDTMNSANLGIKGLNVTDKNGTAATYAID 360
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
I I ++ +G++ +R+ D + + + R+ D DMA E S
Sbjct: 361 AISDAISKVSSQRSALGAVQNRLEHTIDNLDNISENTSSAESRIRDTDMAKEMVNYSKNN 420
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
Q L+ N S +L L +
Sbjct: 421 ILAQAGQSMLAQANQSNQGVLQLLQ 445
>gi|327248267|dbj|BAK09200.1| flagellin [Selenomonas ruminantium subsp. lactilytica]
Length = 441
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 59/439 (13%), Positives = 140/439 (31%), Gaps = 11/439 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N SA+S L + L ++VSSG++++ AAD+A+ ++I++ M+ L
Sbjct: 4 VVKNNMSAISTLNTLNKNSSALSKSLEKVSSGMKINGAADDASGYAISERMRVQIRGLDQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
+ G++ + +A+ +S +D++ T+K K+ Q+ +L + I
Sbjct: 64 SNANTQNGNAMMKVAEGAVSSTVDILKTLKEKVINAANDTNTDSDRQTIQKELDQSIDQI 123
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
++ D + + + + D + + + + L+ +
Sbjct: 124 DDNANITYNGKYLVDGSHNNKTTNTTTALTNESMDAATTKTSALTGLKNRNGESLNIHST 183
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ QV + + + K +F+++
Sbjct: 184 DNVTISYVHEGKTYSTTFQVGSESLATAVAKTAYNGDKSLTG-----------ALSFNES 232
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
+ I + + + + S + S +
Sbjct: 233 GATSKIGLDGSGNTVYTADKGCALTLTAKTTGVAGQISGFTISITTNKGAINKSANAVLD 292
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
++ + + + + + S T + + ++
Sbjct: 293 NFTESIRAQNKSEDNAMVFQVGTKANQAIKVGLTDMRSTALGLKGADGETLSVSTQVKAN 352
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
++ +D I+ A IGS+ SR+ + + V+ + DADMA E T
Sbjct: 353 AAINVLDNAIQKALDQQTTIGSVESRLSYTSSNLTTASENVQSSESTIRDADMAKEMTNY 412
Query: 423 SALQTQQQLAVQALSIVNN 441
+ Q A L+ N
Sbjct: 413 TKNNVLLQAAQSMLAQANQ 431
>gi|50082713|gb|AAT70054.1| flagellin [Pectinatus frisingensis]
Length = 448
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 68/450 (15%), Positives = 149/450 (33%), Gaps = 4/450 (0%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ N SA++ + N NL +VSSG +++ AAD+ A ++I+Q M++ +L+
Sbjct: 3 LVVKNNMSALNTLNIMSKNNKNLAASLQKVSSGQKINSAADDPAGYAISQRMQTQIRSLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
++ G + + A+ +S +D++ T+K K+ + + L +
Sbjct: 63 QDNENAANGQNMLKTAEGTVSSTVDILKTLKEKVLDAANDTNTTYDRDTIQDYLNQAVDQ 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I ++ L D + + A +V + G +++ LD L+
Sbjct: 123 INDNANVTYNGKLLVDGSMNQSGTAATVTYTNESLSTGTAFSSSLTALLDRNGNSLNILG 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ + S+++A+ + A + +F
Sbjct: 183 ADQVTISYVSNGKTMTTSFSASGATLQSIFNAASQADGASETGFGDANYLTGAGSGSFIG 242
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ ++ + S + GN V +
Sbjct: 243 LNAQGVSVYTADGSSVLAVASTKAGVGGNISGFTISITGTDGNVKKSVNSVLDAWNEQIN 302
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
S + +S + L + ++ + +
Sbjct: 303 AQDKSNDNSITLQVGTKANQSIRVG----LGDMRARALGLQGVSADGSVQNLDVSTRSNA 358
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
V+ +D ++ A +IGS+ SR+ +D + V+ + DA+MA E T
Sbjct: 359 NAAVNVLDNAVQKALKEQTQIGSVESRLDYTQDNLTTASQNVQASESTITDANMAQEMTE 418
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q + L+ N+ + IL L +
Sbjct: 419 YTKNNILMQASQAMLAQANSGSQNILQLLQ 448
>gi|255523737|ref|ZP_05390703.1| flagellin domain protein [Clostridium carboxidivorans P7]
gi|296186741|ref|ZP_06855143.1| flagellin protein [Clostridium carboxidivorans P7]
gi|255512606|gb|EET88880.1| flagellin domain protein [Clostridium carboxidivorans P7]
gi|296048778|gb|EFG88210.1| flagellin protein [Clostridium carboxidivorans P7]
Length = 399
Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats.
Identities = 51/448 (11%), Positives = 120/448 (26%), Gaps = 51/448 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+
Sbjct: 3 INHNMNAMNAHRNMAMNTNAAGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGFDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
S S + A+ +++ ++ ++ S S +Q +++ +
Sbjct: 63 SRNGQDSISLIQTAEGALNETHSILQRMRELAVQSANDTNTSTDRTS----IQDEIKQL- 117
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ +++
Sbjct: 118 ----------------------------------------------TQEVNRIANTTEFN 131
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
T++ D + V K +T ++
Sbjct: 132 TKKLLNGDLKGVSDFQKAVQKSDVTFANGNVKLSNTSTNLSVFAKTDVIRINFVKTVSTG 191
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + S + + + +
Sbjct: 192 ATFSANTAGGISITTVLGNIDASKVTFTANGDLVISDGTNTIKLNMTSGKDIRSGDTITI 251
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ ++ ++L I S +
Sbjct: 252 SVKAFEAAETDSSKQARAQIGANAGQELGIGIGDMSSKALGLQKTDGTALDVTSQAKASG 311
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
V+ I+ I+ + K+G+ +R+ + + + ++ R+ D DMA+E T S
Sbjct: 312 AVTLINNAIERVSTERSKLGAFQNRLEHTINNLNTSSENLQASESRVRDVDMANEMTTYS 371
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A L+ + ++L L R
Sbjct: 372 KNNILTQAAQAMLAQAKSQPEQVLQLLR 399
>gi|2935157|gb|AAC38200.1| type I flagellin [Burkholderia cepacia]
Length = 504
Score = 166 bits (419), Expect = 7e-39, Method: Composition-based stats.
Identities = 77/504 (15%), Positives = 153/504 (30%), Gaps = 53/504 (10%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N ++M A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 1 MLGINSNINSMVAQQNLNGSQNVLSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQS 117
+ G S + A +G+S+ + I+ TD +++Q E++Q S
Sbjct: 61 NQGVSNSNDGVSMIQTASSGLSQITSSLQRIRQLAVQASSGSLSPTDQQALQQEVSQQIS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG+N L G+ + + +V + + + V ++ L L
Sbjct: 121 EVNRIASQTNYNGKNLLDGSAGNVSFQVGANVGQTISLNLSQSVSAASLGTGLPTNGATL 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
T + + + T + + A A
Sbjct: 181 GQLTGLSLTSAGAATTGTQTPAITTINILSDGQGGFKFTDQNNQALASGAVTNLFGANTA 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGN------------- 284
A + + + + + + S + +
Sbjct: 241 GSGTALSLTPVATGALGSITSVPAAPSAATTSSVTAINATNAGNGSTVVGRAASGTALGT 300
Query: 285 -------------------------------------SDIWVRATTKNSITSDPGYTNST 307
D A T + T +T
Sbjct: 301 ITGLSLDSNGGFIAPNESGATITSISVLSDGAGGFTFQDQNGNALTAGVTSKVFSITAAT 360
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
+ S T ++ + S N+ + + +
Sbjct: 361 TTAGASLTLNATIGSATTNATTQGLASQSAISSANLANVPPRVADINISTTAGANQAMES 420
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
ID + G+ +R + + + ++ DA+ A E+ LS Q
Sbjct: 421 IDNALATVNNIQATFGAAQNRFTAISTTQQAQATNLSQAQSQIQDANFAQETANLSKAQV 480
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
QQ + L+ N+ ++L L +
Sbjct: 481 LQQAGISVLAQANSLPQQVLKLLQ 504
>gi|13124736|sp|P13118|FLAA2_RHIME RecName: Full=Flagellin A
gi|12057227|gb|AAB81420.2| FlaA [Sinorhizobium meliloti]
Length = 395
Score = 166 bits (419), Expect = 7e-39, Method: Composition-based stats.
Identities = 167/451 (37%), Positives = 231/451 (51%), Gaps = 56/451 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN+SAM+A LR I+ ++E Q R+SSGLRV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNNSAMAALSTLRSISSSMEDTQSRISSGLRVGSASDNAAYWSIATTMRSDNQAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG++KVD A +GM AI+V+ IK K+ A E G D IQ EITQL+ QL
Sbjct: 61 SAVQDALGLGAAKVDTAYSGMESAIEVVKEIKAKLVAATEDGVDKAKIQEEITQLKDQLT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SF+GENWL+ DL ++ KSV+GSF+RD +G V + +DY L+ +VL D
Sbjct: 121 SIADAASFSGENWLQADLS--GGAVTKSVVGSFVRDGSGSVAVKKVDYSLNANSVLFD-- 176
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T +
Sbjct: 177 ---------------------------------------------TVGDTGILDKVYNVS 191
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
QA T+ + S S +++ + ++ GNS + V + T+
Sbjct: 192 QASVTLTVNTNGVESQHTVAAYSLESLTEAGAEFQGNYALQGGNSYVKVENVWVRAETAA 251
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G T +A + +S +D + +G S+ +NI
Sbjct: 252 TGATGQEIAATTTAAGTITADSWVVDVGNAPAANVSAGQSVANINIVGMGAAALDALISG 311
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ++ + + A +GSISSRI LQ +F+ + D++E GVGRLVDADM EST
Sbjct: 312 VDAALTDMTSA-------AASLGSISSRIDLQSEFVNKLSDSIESGVGRLVDADMNEEST 364
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQTQQQLA+QALSI N+ + +LSLFR
Sbjct: 365 RLKALQTQQQLAIQALSIANSDSQNVLSLFR 395
>gi|116563755|gb|ABJ99890.1| phase 1 flagellin [Salmonella enterica subsp. salamae]
Length = 367
Score = 166 bits (419), Expect = 7e-39, Method: Composition-based stats.
Identities = 55/400 (13%), Positives = 115/400 (28%), Gaps = 36/400 (9%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ LS S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ G+D KSIQ EI Q +++ +A + FNG+ L D + A
Sbjct: 61 RVRELSVQAANGSNSGSDLKSIQDEIDQRLNEINRVAEQTDFNGKKVLSQDGQLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+D + + V
Sbjct: 121 NDGET----------------ITIDLQKIDKTELGLDKLDVTKGIATTVSSGASVVGDVK 164
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ + + + K D + + S
Sbjct: 165 IAAADFDNAKTTGGPAADKLSLTKDDKGNYFVKDVTATAKYYAATVDMTTGKISFDSDKD 224
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + T + S+ + + + ++
Sbjct: 225 VTATAGTPPAVTTLSREVKSDGADLKADQSLVKYKDDKGKDLYAIQTLDKDGNATFKSVT 284
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + A + ++ ID +K A ++G++
Sbjct: 285 FAAVGKTTEGTAVDLA-----------------ANVDPLAKIDDALKTVDAFRSQLGAVQ 327
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+R + + + R+ D+D A+E + +S Q
Sbjct: 328 NRFESAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQ 367
>gi|148910959|gb|ABR18538.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Coeln]
Length = 466
Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats.
Identities = 60/466 (12%), Positives = 124/466 (26%), Gaps = 54/466 (11%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
+R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ +
Sbjct: 1 IERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNN 60
Query: 88 MSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ ++ SIQ+EITQ +++ ++ + FNG L D +
Sbjct: 61 LQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQV 120
Query: 145 IAKSVIGSF----------------IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
A V+ T + + +
Sbjct: 121 GANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKDTAVTTKAYANNGTTLDVSGLDDAAI 180
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
+ + ++ F A + N D +A
Sbjct: 181 KAATGGTNGTASVTGGAVKFDADNNKYFVTIGGFTGADAAKNGDYEVNVATDGTVTLAAG 240
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
A T +P+V ++ + + + +
Sbjct: 241 ATKTTMPVGATTKTEVQELKDTPAVVSADAKNALIAGGVDATDANGAELVKMSYTDKNGK 300
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY------------- 355
G + D + S + T +
Sbjct: 301 TIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTTKTAANQLGGVDGKTEVVTID 360
Query: 356 ----------------------NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
E + ID + A +G++ +R +
Sbjct: 361 GKTYNASKAAGHDFQAQPELAEAAAKTTENPLPKIDAALAQVDALRSDLGAVQNRFNSAI 420
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+ + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 421 SNLGNXVNNLFEARSRIEDSDYATEVSHMSRAQILQQAGTSXLAQA 466
>gi|292670022|ref|ZP_06603448.1| flagellin protein [Selenomonas noxia ATCC 43541]
gi|292648323|gb|EFF66295.1| flagellin protein [Selenomonas noxia ATCC 43541]
Length = 444
Score = 166 bits (418), Expect = 9e-39, Method: Composition-based stats.
Identities = 63/449 (14%), Positives = 142/449 (31%), Gaps = 8/449 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N SA++ L L +VSSG++++DA D+A+ ++I++ M+ +L
Sbjct: 4 VVKNNMSAVNTLNILNKNQSALAKSLQKVSSGMKINDAGDDASGYAISERMRVQIRSLDQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
+ G+S + A+ ++ ++++ T+K K + ++ ++ + I
Sbjct: 64 DNQNTQNGNSMMKTAEGAVASTVEILKTLKEKAINAANDTNTDEDRRTIQKEINQMVDQI 123
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ D ++ A I + + L+ +
Sbjct: 124 DDNALATYNGKYLVDGSRNSIGTATCTILTNSSLSTSASWTDALTDLKSRTDESLNIQST 183
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + V ++ S + + T + A N+ F
Sbjct: 184 DSISVSYVREGRTYTTTFSVGSTNTLADIIKSTAFNGAESLAGTAAVASGSTQNSAFIGL 243
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
A + +GT + S A G
Sbjct: 244 DKAKNSVYTADNKSALSISAAGTGTTYQISSFTIAIKDNTGALRKTANNALDAFTERVRA 303
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
S + ++ + S+ R + + +
Sbjct: 304 ENKSEDNALTLQTGTRANQAIKVSMSDM--------RSLALGMKGRDGSVISVQTQDKAN 355
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
++ I+T ++ A IG++ +R+ + + V+ + DADMA E T
Sbjct: 356 AAINAIETALQKALDEQANIGAVQTRLAYTSSNLTTASENVQNSESVIRDADMAKEMTNY 415
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q A L+ N +++ +LSL +
Sbjct: 416 TKNNVLLQAAQSMLAQANQNSSAVLSLLQ 444
>gi|87242434|gb|ABD33756.1| flagellin [Bacillus thuringiensis serovar poloniensis]
Length = 413
Score = 166 bits (418), Expect = 9e-39, Method: Composition-based stats.
Identities = 71/415 (17%), Positives = 142/415 (34%), Gaps = 5/415 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L +D G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAADNTQNGMSLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ ++ ++Q E +LQ Q+ IA + FN +N L+ +
Sbjct: 61 NSVSNILLRMRDIANQSANGTNTDSNKAALQKEFGELQKQITYIADNTQFNDKNLLKENQ 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ ++ I D V + + + S+ G + + +
Sbjct: 121 TINIQTLDSDSSSKQIGIDLKAVTL--DKLGIKDLAIGNSSNAAGDLKAAREALDALNQP 178
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
D D V A K + + A + K A A A
Sbjct: 179 GFITASDRDNKVATAKEAFDKVKDLFGSDEQDDINDAFNAYATTKSDAKAKDIYTALKAD 238
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
T ++ + A S T K + T +
Sbjct: 239 TLKTKNEKAFEAATTAFSDLSGATDTVYDTDGTTVKTAGTHPGLVNTAKDQFDAIKDTLS 298
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
++ L+ E S + A N K+ + V+ ID +K
Sbjct: 299 KEDTQKLEDAFKAYNEDPSAAKAKAIGQAFTGMKMAENTKVDALDAVAKIDAALKTVADN 358
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ + +K A+ ++ DADMA E + ++ + + +
Sbjct: 359 RATLGATLNRLDFNVNNLKSQSSAMASAASQIEDADMAKEMSEMTKFKILNEAGI 413
>gi|269976345|ref|ZP_06183338.1| flagellin D [Mobiluncus mulieris 28-1]
gi|269935455|gb|EEZ91996.1| flagellin D [Mobiluncus mulieris 28-1]
Length = 538
Score = 166 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 66/500 (13%), Positives = 136/500 (27%), Gaps = 72/500 (14%)
Query: 24 LEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSK 83
L +++SSG R++ AAD+AA +I++ +++ G G S V A+ +++
Sbjct: 39 LAKSLEKLSSGFRINRAADDAAGLAISEGLRTQVGGNRQAVRNAQDGISLVQTAEGALNE 98
Query: 84 AIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGS 140
++ ++ ++I +E++QL+ +L+ I ++FNG + L
Sbjct: 99 VHSILQRMRVLAVQGATDSNSPDARRNINTELSQLRDELQRIGSVTNFNGTSLLNGKASG 158
Query: 141 STA--SIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ A + + R + S+T+ T + +++
Sbjct: 159 NDALKFQVGANGNADNRIVVDLRDADVTAVAKFSGIKKVTSATELTAGAAFDKGKYALEL 218
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
+ +VL + A+ KK A + T + A A
Sbjct: 219 DGKVLNLDFSAAKPANEKEVQKKLAEALKASGIEGYVGGTTNVAASGAVTDFDKAVLDGK 278
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
T S A G + + + +
Sbjct: 279 TFTLKVGEHEISVDAKTLADGTHQGATPQRLVDVFNQELGKKGLNYTMSYGDADGFKITA 338
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ + + K E+ + + IK A
Sbjct: 339 NDSESAQVTVKLTTDASGIKVGGKDTTTLLDDRVGKPKGAGYALEVGNDLTLHIKRADGG 398
Query: 379 A---------GKIGSISSR-------------------------------------IHLQ 392
K+G+ ++ + +
Sbjct: 399 RIDKIGAHNLTKLGATANTGDTDVAFTATGETADVATDYNYLTVDSHDAAQNLINVLDAK 458
Query: 393 EDFIKLMRDAVEKGVGR---------------------LVDADMASESTRLSALQTQQQL 431
+ R + R + D DMA E + + Q Q
Sbjct: 459 IQSVSTARANLGAVQNRFEHTITNLNVAVENLAASESRVRDTDMAQEMMQFTRNQILSQA 518
Query: 432 AVQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 519 GTSMLAQANQVPQGVLSLLR 538
>gi|163733164|ref|ZP_02140608.1| hypothetical protein RLO149_10900 [Roseobacter litoralis Och 149]
gi|161393699|gb|EDQ18024.1| hypothetical protein RLO149_10900 [Roseobacter litoralis Och 149]
Length = 440
Score = 166 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 120/451 (26%), Positives = 185/451 (41%), Gaps = 11/451 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+SAM A Q L+ IN +L VQ +S+G V+ A DNAA W+I+++M SD
Sbjct: 1 MSSILTNNSAMVALQTLKSINNDLGKVQSEISTGKTVASAKDNAATWAISKVMSSDVEGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
A+SD++ LGSS V +A G D+++ IK KI E D IQ++I L+ Q++
Sbjct: 61 KAISDSLSLGSSTVGVALNGAEGITDLLTEIKGKIVNAQEENVDRDKIQTDIEALRDQIQ 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FNG N L + A+ + + D G + + + + + +S
Sbjct: 121 SISGAAQFNGLNLLSNTESGTDAAGSGTSNILSSLDRAGDGTVAASNIAVAKQDLGTGAS 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ I V + A+ T F + ++A
Sbjct: 181 AIDFTATAVTAATDIISVGGAATQVAVAQAGAAAPTADVDAFSFGAAATDAVEAGTGFQI 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
L T G + VA + + N +
Sbjct: 241 MLSADGGALDNLLDTADGDITFVARDGDTAADVATALADKFNAYVTEALGENATNPVAV- 299
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + + E + N +
Sbjct: 300 ----------ANGNSIEITPATGVAADTFSINAEQYAAADTTIGGRLEALNEIDVSTAAG 349
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
E ++ I+T I+ + AA +GS RI Q +F+ + D ++ G+G LVDADM + S
Sbjct: 350 AESALAEIETLIQTSIDAAASLGSDGKRIETQNEFVGKLMDGLKSGIGSLVDADMEAASA 409
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+L ALQTQQQL VQALSI N + ILSLFR
Sbjct: 410 KLQALQTQQQLGVQALSIANQAPQTILSLFR 440
>gi|59044697|gb|AAW84042.1| FliC [Escherichia coli]
Length = 445
Score = 166 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 60/446 (13%), Positives = 130/446 (29%), Gaps = 37/446 (8%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N ++ L +L +R+SSGLR++ A D+AA +IA ++ L+ S
Sbjct: 1 NSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRN 60
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIA 123
G S + +++ + + ++ SIQ+EITQ + ++
Sbjct: 61 ANDGISVAQTTEGALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEDIDRVS 120
Query: 124 RGSSFNGENWLRTDLGSSTA---------------------------------SIAKSVI 150
+ FNG L + + +I
Sbjct: 121 EQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATGSDLI 180
Query: 151 GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
F + Y ++ ++ + +T D + K + + +
Sbjct: 181 SKFKATGTDNYDVGGDAYTVNVDSGAVKDTTGNDIFVSAADGSLTTKSDTNIAGTGIDAT 240
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
A+ + + T +G A G+ + + + + +
Sbjct: 241 ALAAAAKNKAQNDKFTFNGVEFTTTTAADGNGNGVYSAEIDGKSVTFTVTDADKKASLIT 300
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ + + +A T + + + + V Y V + T+
Sbjct: 301 SETVYKNSAGLYTTTKVDNKAATLSDLDLNAAKKTGSTLVVNGATYDVSADGKTITE-TA 359
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
S N DA + + ID + +G++ +R
Sbjct: 360 SGNNKVMYLSKSEGGSPILVNEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGAVQNRFD 419
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + + R+ DAD A
Sbjct: 420 SAITNLGNTVNNLSSARSRIEDADYA 445
>gi|113911621|gb|ABI48292.1| Fla2 flagellin [Eubacterium rectale DSM 17629]
Length = 455
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 56/455 (12%), Positives = 118/455 (25%), Gaps = 54/455 (11%)
Query: 51 QIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKS 107
+ M+ L S G S V A+ +++ ++ + T TD K+
Sbjct: 1 EKMRKQIRGLDRASTNAQDGVSAVQTAEGALTEVHSMLQRMNELATQAANGTNSTTDRKA 60
Query: 108 IQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTID 167
IQ E+ QL +++ ++ + FN L+ D G+ T ++ G N T
Sbjct: 61 IQDEVDQLSTEIDRVSETTKFNETYLLKGDQGTKTINLEAHDAGLKGTLTNNGDGTATFT 120
Query: 168 Y---------YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+ + + +T+ + L + K + +
Sbjct: 121 MDALKGGDKISIGGKQYTIGGTTEQDVKDFLKKNGVEDKADSTFSITSGNKTVTYKYYAA 180
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
+ A A +T A + ++S + A+
Sbjct: 181 KADVATGGNTTYGYDAGWYNEADAPTTSTTTGDQATVNAKKKDSYEAFATQSGTFTAAGK 240
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE---- 334
+ + S G + T +
Sbjct: 241 TLEKATITDANPTDGVDDKDSTVISVQKAYELAGKELLKANQIGDTEGHASVKNADDSDL 300
Query: 335 --------------------------------------IDSGYSMVTLNITRHANTDAYN 356
+ +M + ++
Sbjct: 301 AYNAGNGSFKINLAQAKVASTLSFNLHVGADADLTNKIQVNIDAMDSASLGIKGLNVNDK 360
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
A + I I ++ +G++ +R+ + + + + R+ D DMA
Sbjct: 361 NGTAGTYAIDAISDAISKVSSQRSSLGAVQNRLEHTINNLDNVVENTTSAESRIRDTDMA 420
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E S Q L+ N S +L L +
Sbjct: 421 KEMVNYSKNNILAQAGQSMLAQANQSNQGVLQLLQ 455
>gi|296274445|ref|YP_003657076.1| flagellin domain-containing protein [Arcobacter nitrofigilis DSM
7299]
gi|157056869|gb|ABV02452.1| flagellin B [Arcobacter nitrofigilis DSM 7299]
gi|296098619|gb|ADG94569.1| flagellin domain protein [Arcobacter nitrofigilis DSM 7299]
Length = 495
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 72/493 (14%), Positives = 159/493 (32%), Gaps = 45/493 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + ++ N + +++S+GL+++ A+D+A+ +IA +++ ++
Sbjct: 3 INTNVASLNAQEAAKNTNNKISSSLEKLSTGLKINKASDDASGLAIADKLRTQANSIGQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
D S + IA MS+ +++ T+K K+ ++I+ +I +L QL
Sbjct: 63 IDNGNSAVSLIQIADKSMSEQSNILDTVKAKLIQANTDTTSADGREAIRKDINKLLEQLD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA+ +++NG L++ + S +DD + +
Sbjct: 123 NIAKQTNYNGTTLLQSGYDNVRGSDQLRFQIGENKDDIIQSASIQSNTVGLGGGTERILQ 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + I+V + + + G++ T + A +
Sbjct: 183 DTTGSKGNTISAETSIRVTADGTNALKLESFATGGSVGKVSISGITGDITFKGEATLSEL 242
Query: 241 QAKGI------------------------------------------ATIPVPLPAAPAA 258
+ V A
Sbjct: 243 DSNTQLILDKLSAASGKSVEVKDENGNILGTFSASSTTGVTKVAATVVNGVVTKEATYTI 302
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
+ T+ G ++ A +A+ S ++ + + N+ + N
Sbjct: 303 SSGTTIKFGGQTTDTANTASSALATYSIESMKIEQSTASGNVTFSANAANLSIYNEEKGS 362
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
E D KD + G + K ++ +D I
Sbjct: 363 SKELKITDGVKDTNTDATKGMRGGLTLSALKSLQAGQLTKEQTDKFQGVVDAAITQLNTF 422
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+GS ++I + + V+ + D D A ES + Q A+S
Sbjct: 423 RADLGSSQNQIESGVRNLMTQQTNVKAAESIIRDVDYAQESANFNKQNIISQAGSYAMSQ 482
Query: 439 VNNSTARILSLFR 451
N+ +L L +
Sbjct: 483 ANSIQQNVLRLLQ 495
>gi|218534722|ref|YP_002424483.1| flagellin domain-containing protein [Methylobacterium
chloromethanicum CM4]
gi|218525871|gb|ACK86454.1| flagellin domain-containing protein [Methylobacterium
chloromethanicum CM4]
Length = 439
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 123/451 (27%), Positives = 193/451 (42%), Gaps = 12/451 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTS+LTN++AM+A L+ IN L+V +RVS+G RVS AADNAAYWSIA +++DNG+L
Sbjct: 1 MTSLLTNNAAMTALTTLKSINTQLDVTSNRVSTGQRVSSAADNAAYWSIATTVRTDNGSL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV D++GLGS+ VD A G++ + + +++K+ A + G D +Q+EI LQ ++
Sbjct: 61 GAVKDSLGLGSATVDTAYTGLTSVLSNLQNMRSKLQAALTPGVDRSKVQTEIKSLQDNMK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A S +G+NWL + ++ A I + DN + + L D S
Sbjct: 121 STADSSIQSGQNWLSVNSSDTSVYKATQSIVAGFSRDNTGHISFSTVDVKVGDIQLYDKS 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T K D + + + + T + L A
Sbjct: 181 LTATAATSAKVTASTAIAGTLDFKTNDNEQSTLTIALGSGESADITLDKSSLTAHVKDLG 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + A+ ++ S + T + V T
Sbjct: 241 AVTKDELLSAINNSIAASDLAGLVSASLDSAGRLSFETIGNPDTDTVAVNIKDGAEGT-- 298
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + D G A
Sbjct: 299 ----------AIDIGFGTDEAVIYNGVGTAKTTGTGGGILDSGNTNVAAVAISNSTTDAA 348
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ + +D I T AA +G+ ++I Q+ F+ + + ++ +G LVDAD+ EST
Sbjct: 349 LKAHIDTVDRAIAKITEAATTLGAAKTQIDGQKTFVDTLMKSNDRAIGILVDADIEEEST 408
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+L ALQTQQQLA+Q LSI N+ST +LSLFR
Sbjct: 409 KLKALQTQQQLAIQTLSIANSSTQGVLSLFR 439
>gi|834004|gb|AAB33953.1| flagellin {alternatively spliced} [Salmonella typhimurium, SJW46,
Peptide Mutant, 397 aa]
Length = 397
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 72/452 (15%), Positives = 133/452 (29%), Gaps = 60/452 (13%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 3 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 63 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D T + + + D T L+ + S
Sbjct: 123 DRVSGQTQFNGVKVLAQDNT-LTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVS 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
L + + V + T LA G +A
Sbjct: 182 DNVQVANADLTEAKAALTAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNK 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D + I T +
Sbjct: 242 DGSISINTTKYTADDGTSKTALNKLG---------------------------------- 267
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
TE ++ + + + ++ A T N
Sbjct: 268 ---------------GADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQ 312
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ ++ +DT A + S + + + + R+ D+D A+E
Sbjct: 313 KIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNL-------TSARSRIEDSDYATEV 365
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 366 SNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 397
>gi|1169694|sp|P46210|FLAA_AQUPY RecName: Full=Flagellin
gi|596246|gb|AAA88923.1| FlaA [Aquifex pyrophilus]
Length = 501
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 67/499 (13%), Positives = 128/499 (25%), Gaps = 49/499 (9%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T I N+ A L+ + R+S+GLR+ AAD+A+ IA + + L
Sbjct: 3 TRINYNYEAAVTYTTLKQNERLMNKSLLRLSTGLRILSAADDASGLFIADQLSLVSTGLQ 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQ 118
+ I S + IA+ G+++ D + T+ K + ++Q +I L+
Sbjct: 63 QGNRNIQFAISALQIAEGGVAQIYDKLKTMYQKAVSAANDINDPNARAALQRDIENLRDA 122
Query: 119 LRDIARGSSFNGENWLRTD----------------------------------------- 137
++ IA+ + +NG L
Sbjct: 123 IQKIAQDTEYNGIRLLDGTLKNGIYIHYGARSEQKLSVAIDDVRASNLGAYLLDLKGQSN 182
Query: 138 -----LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ + I S V + + + D + +
Sbjct: 183 SAYDSFANLLTTDTNFDIASTETISIAGVTHSPPTNIVTDARYIADWINGDPTLQQMGIK 242
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
S TI T + T + I+ I
Sbjct: 243 AKASNRVVGDPWVNVAVDTGDSLTIKFYVGTSTTPAITLTYGPGKTITLDRIISDINSKA 302
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+G ++ + G S + +T A
Sbjct: 303 TGLNLVAKEENGRLVIETSGETVGVEVSKSGTGGTTFSLDQIISGVNKTVNNTNTQASAI 362
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ + S E + +
Sbjct: 363 KVGDLRIIDDESYTYDFTGIAGAFGLTSPSGTVGITDLYAIDVTTNEGAELAMDILTIAA 422
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ +IGS + D + +D + + + D A E T + Q + Q
Sbjct: 423 QKVDEIRSQIGSTIINLQAIYDAKAVAKDNTDNAENIIRNVDFAKEMTEFTKYQIRMQSG 482
Query: 433 VQALSIVNNSTARILSLFR 451
+ L+ N +L L R
Sbjct: 483 IAMLAQANALPQLVLQLLR 501
>gi|154250153|ref|YP_001410978.1| flagellin domain-containing protein [Fervidobacterium nodosum
Rt17-B1]
gi|154154089|gb|ABS61321.1| flagellin domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 372
Score = 165 bits (416), Expect = 2e-38, Method: Composition-based stats.
Identities = 69/435 (15%), Positives = 132/435 (30%), Gaps = 67/435 (15%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
N ++ +R+SSGLR++ A D+AA +I++ M+ L S + A+
Sbjct: 2 TNMDMSKTLERLSSGLRINRAGDDAAGLAISEKMRGQIKGLDMAIKNSQDAISLIQTAEG 61
Query: 80 GMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ ++ ++ D IQ+E+ QL+ ++ IAR + FN +
Sbjct: 62 ALTEVHSILQRMRELAVQAASDTNTNVDRNQIQAELDQLREEIDRIARTTEFNTKKL--- 118
Query: 137 DLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
LD +G +
Sbjct: 119 ----------------------------------------LDGKLEGFKNTPDAKVVTGG 138
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
+ V + + I +FK A TS +K + +T +
Sbjct: 139 NINVTVGGYSKTGATEGTYVIEVGQFKGAVTSQLDVKITQIGNNGTVLNSTTATIGALSA 198
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
A N T + S A + VR + + + +
Sbjct: 199 ALGNVTIKWQRVFTISDFGDALPVNEVIDSAVVRVEARYTANNQLVFQIGANEGHNMIAG 258
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
+ + L K D + T+ + A + A+ + + ++ I
Sbjct: 259 IDNMSAKALGLLTSTLKVTDQNSAEKTIMVVDAAIHRVSTARAALGAIQNRLEHTIANLG 318
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
AA + R+ DADMA E + + Q Q ++ L
Sbjct: 319 VAAENL---------------------TAAESRIRDADMAKEMMQFTKQQILLQSSMSML 357
Query: 437 SIVNNSTARILSLFR 451
+ N ++L L R
Sbjct: 358 AQANAQPQQVLQLLR 372
>gi|296274444|ref|YP_003657075.1| flagellin domain-containing protein [Arcobacter nitrofigilis DSM
7299]
gi|296098618|gb|ADG94568.1| flagellin domain protein [Arcobacter nitrofigilis DSM 7299]
Length = 498
Score = 165 bits (416), Expect = 2e-38, Method: Composition-based stats.
Identities = 71/496 (14%), Positives = 148/496 (29%), Gaps = 48/496 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + + N + +R+S+GL+V+ A+D+A+ +IA +++ ++S
Sbjct: 3 INTNIASLNAQEAAANTNKKIATSLERLSTGLKVNKASDDASGLAIADKLRTQASSISQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
D + + IA MS+ +++ T+K K+ T ++I+ +I +L QL
Sbjct: 63 IDNGNSAVALIQIADKSMSEQSNILDTVKAKLIQANTDTTSPDGREAIRKDIVKLLEQLD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL--- 177
+IA+ +S+NG L+ S ++SI +DD K +
Sbjct: 123 NIAQQTSYNGITLLQDSYDSMSSSIELKFQIGGNKDDIMKSSFIQSNTVGLGGGQGALDQ 182
Query: 178 --DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
SST L + D + I+ + L
Sbjct: 183 VSGSSTRNNVISQGLSTVISGDGTNPITLDGYATGTAIKVNITGIPGDITANGPTELSKV 242
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
++T A + + S + + +T
Sbjct: 243 DSTTQLVLEALANATSGVNGSPATVEVKDINDRVIGTFTLETPPGTSIASGLVMHSTPGL 302
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
+ + + S + + + +A
Sbjct: 303 NGAEPIVTFSLASGATIGMGGKTINTVEIAGDPLNTFTIGAMTISQTSASGNITFDANAQ 362
Query: 356 N----------------------------------------EKLAMEEMVSFIDTQIKCA 375
N + + +D +
Sbjct: 363 NLNIQNLNSANGQELKVTTATGSITGGGTLAGLKALQAGQLTQKQAVKYQGIVDAALSQM 422
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+GS +++ + + V + D D A ES + Q A
Sbjct: 423 NIYRSDLGSTQNQVESAVRNLMTQKTNVTAAESVIRDVDYAQESANFNKQNIIAQAGNYA 482
Query: 436 LSIVNNSTARILSLFR 451
+S N+ +L L +
Sbjct: 483 MSQANSVAQNVLRLLQ 498
>gi|218134725|ref|ZP_03463529.1| hypothetical protein BACPEC_02628 [Bacteroides pectinophilus ATCC
43243]
gi|217990110|gb|EEC56121.1| hypothetical protein BACPEC_02628 [Bacteroides pectinophilus ATCC
43243]
Length = 524
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 71/521 (13%), Positives = 146/521 (28%), Gaps = 73/521 (14%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN SA+ + +L+ NLE +R+SSG +++ A+D+AA +I+ MK L
Sbjct: 3 INTNISAVVTNNQLQKAQTNLERSLERLSSGYKINHASDDAAGMAISLKMKLQIRGLDQS 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ G S + A+ +++ +++ +K + ++IQ E+ L ++
Sbjct: 63 DNNAADGVSVLQTAEGAIAEIQSMLTRMKELSVQAANDTNADGEREAIQKELQSLNKEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN ++ + +L + + + S
Sbjct: 123 RIANDTEFNSQSLINGNLERRVYTRNNVHGVEQFECSSNIAAGDYGITVAQDARQAVVKS 182
Query: 181 TDGTERYGLLDRN--------------------------------------HKIKVEPQV 202
T +
Sbjct: 183 GAVTLNGKVTAAMEGTVKINGYDIDINEGDDMDKIMTKLSSAMGLLGGKVFATTDSASGA 242
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ + + + T N T D + + + A
Sbjct: 243 GEADNAGYVPVVSGTAGSSLVIMTNEYGSDVKLNITCDNTLLASALGLDGAADDDGIVAQ 302
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ ++ A + I D V + D +
Sbjct: 303 GVDAKAEFTKDANGNRIGFADTATISANGKMITVKDVDNKTFKVDVPGDIAKTKFTDVDG 362
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA----- 377
T + + +I + + +I +I+ +
Sbjct: 363 TAVGEAGVATDTSAQAGASTPADIVQQVTDFGGMKVHVGANEDQYIAVEIEQISTYKLGL 422
Query: 378 --------------------AAGKIGSISSRIHLQEDFIKLMRDAVE-------KGVGRL 410
A K+ SI S + E+ I+ ++ ++ + R+
Sbjct: 423 DQINVMSHYNAGRSIDKIDEAVSKVSSIRSTLGSYENRIEHTQNNIDTSTENMTAALSRM 482
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+D DMA E T ++ Q A LS N +L L +
Sbjct: 483 IDTDMAEEMTEYTSQNVLVQAATSILSQANARPETVLQLLQ 523
>gi|30059886|gb|AAP13315.1| FliC [Escherichia coli]
Length = 399
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 67/412 (16%), Positives = 127/412 (30%), Gaps = 16/412 (3%)
Query: 23 NLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82
L +R+SSGLR++ A D+AA +IA S+ L+ + G S + +S
Sbjct: 1 ALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISLAQTTEGALS 60
Query: 83 KAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
+ + + ++ +D SIQ EI ++ ++ + FNG N L D
Sbjct: 61 EINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLDEIDRVSGQTQFNGVNVLSKDGS 120
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
A I ++ L + + L N +
Sbjct: 121 MKIQVGANDGQTISIDLKKI-------------DSSTLGLNGFSVSKNSLNVSNAITSIP 167
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+ + + + KL + + L N K A V A
Sbjct: 168 QAASNEPVDVNFGDTDESAAIAAKLGVSDTSSLSLHNILDKDGKATADYVVQSGKDFYAA 227
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + ++ + G D G V G + D
Sbjct: 228 SVNAASGKVTLNTIDVTYDDYANGVDDAKQTGQLIKVSADKDGAAQGFVTLQGKNYSAGD 287
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ L + + N E + E+ ++ +D I
Sbjct: 288 AADILKNGATALKLTDLNLSDVTDTNGKVTTTATEQFEGASTEDPLALLDKAIASVDKFR 347
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 348 SSLGAVQNRLDSAITNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQA 399
>gi|87242456|gb|ABD33767.1| flagellin [Bacillus thuringiensis serovar vazensis]
Length = 410
Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats.
Identities = 60/415 (14%), Positives = 135/415 (32%), Gaps = 8/415 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L +D G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAADNTQNGMSLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ ++ ++Q E +LQ Q+ IA + FN +N L+
Sbjct: 61 NSVSNILLRMRDIANQSANGTNTDSNKSALQKEFGELQKQITYIADNTQFNDKNLLKEGS 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
S ++ S I D V + + + + ++
Sbjct: 121 TVSIQTLDSSTSSQQIGIDLKAVTLEKLGINNISIGEANAT-----TGTTDPTKVDLTEL 175
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
+ K + ++ K + + + +A A A
Sbjct: 176 KKATAKLETPNTATMEADVTKAKEEFDKIKASLSTEDASKITKAFEKFEADKGEADATAI 235
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
NT + + A + + I T +
Sbjct: 236 FNTVKNVTPVDKSAAAPAKVDLSEVTKAIAKLETPNTATMEADVTKAKEEFDKIKASLST 295
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ S + + + + N + K A + ID +
Sbjct: 296 EDASKITKAFEKFEADKGEADATAIFNTFKGVKPTTETNKDAALAAIDAIDKALTKVADN 355
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ + +K + ++ ++ DADMA E + ++ + + +
Sbjct: 356 RATLGATLNRLDFNVNNLKSQQSSMSAAASQVEDADMAKEMSEMTKFKILNEAGI 410
>gi|30059884|gb|AAP13314.1| FliC [Escherichia coli]
Length = 461
Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats.
Identities = 64/460 (13%), Positives = 125/460 (27%), Gaps = 40/460 (8%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
L +R+SSGLR++ A D+AA +IA S+ L+ + G S
Sbjct: 1 NKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISLAQTT 60
Query: 78 KAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ +S+ + + ++ +D SIQ EI S++ ++ + FNG N L
Sbjct: 61 EGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRLSEIDRVSGQTQFNGVNVL 120
Query: 135 RTDLGSSTASIAKSVIGSFIR-----------DDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ S A I D + T+ + +
Sbjct: 121 AKNDTLSIQVGANDGQTINIDLQQIDSHTLGLDGFSVKNNDAVKTSAAVNTLGGGAGSVA 180
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + D ++ A A K
Sbjct: 181 VDFATTSLTAITGLGSGAISEIAKDDNGDYYAHVTGTTGNTADGYYAVDIDKATGEVALK 240
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + S A+ I G S + ++ N +
Sbjct: 241 DGNVDTPTGTPTTTSTYDFTDAGQTVSFGTDAATAGISTGASLVKLQDEKGNDTATYAIK 300
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
N + S D + + ++ +
Sbjct: 301 AQDGSLYAANVDEATGKVTVKTASYTDADGKAVTDAAVKLGGDNGTTEIVVDAASGKTYD 360
Query: 364 M--------------------------VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
++ +D I +G++ +R+ +
Sbjct: 361 AGALQNVDLSSATNTVTAIPNGKTTSPLAALDDAISQIDKFRSSLGAVQNRLDSAVTNLN 420
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+ + R+ DAD A+E + +S Q QQ LS
Sbjct: 421 NTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLS 460
>gi|152221|gb|AAA26277.1| flagellin A (flaA) [Sinorhizobium meliloti]
Length = 395
Score = 164 bits (413), Expect = 4e-38, Method: Composition-based stats.
Identities = 166/451 (36%), Positives = 231/451 (51%), Gaps = 56/451 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN+SAM+A +R I+ ++E Q R+SSGLRV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNNSAMAALSGVRSISSSMEDTQSRISSGLRVGSASDNAAYWSIATTMRSDNQAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG++KVD A +GM AI+V+ IK K+ A E G D IQ EITQL+ QL
Sbjct: 61 SAVQDALGLGAAKVDTAYSGMESAIEVVKEIKAKLVAATEDGVDKAKIQEEITQLKDQLT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SF+GENWL+ DL ++ KSV+GSF+RD +G V + +DY L+ +VL D
Sbjct: 121 SIADAASFSGENWLQADLS--GGAVTKSVVGSFVRDGSGSVAVKKVDYSLNANSVLFD-- 176
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T +
Sbjct: 177 ---------------------------------------------TVGDTGILDKVYNVS 191
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
QA T+ + S S +++ + ++ GNS + V + T+
Sbjct: 192 QASVTLTVNTNGVESQHTVAAYSLESLTEAGAEFQGNYALQGGNSYVKVENVWVRAETAA 251
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G T +A + +S +D + +G S+ +NI
Sbjct: 252 TGATGQEIAATTTAAGTITADSWVVDVGNAPAANVSAGQSVANINIVGMGAAALDALISG 311
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ++ + + A +GSISSRI LQ +F+ + D++E GVGRLVDADM EST
Sbjct: 312 VDAALTDMTSA-------AASLGSISSRIDLQSEFVNKLSDSIESGVGRLVDADMNEEST 364
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQTQQQLA+QALSI N+ + +LSLFR
Sbjct: 365 RLKALQTQQQLAIQALSIANSDSQNVLSLFR 395
>gi|323703359|ref|ZP_08115009.1| flagellin domain protein [Desulfotomaculum nigrificans DSM 574]
gi|323531722|gb|EGB21611.1| flagellin domain protein [Desulfotomaculum nigrificans DSM 574]
Length = 379
Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats.
Identities = 73/418 (17%), Positives = 136/418 (32%), Gaps = 45/418 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++L + N + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTYRQLSNNGVNTQKALEKLSSGLRINKAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ S + A+ +++ ++ ++ TD IQ EI QL S++
Sbjct: 63 ARNAQDSISMIQTAEGALNETHSILQRMRELAVQAGNDTNTTTDRAEIQKEINQLTSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN + L G+ TA+ A +V GS I G TT + S
Sbjct: 123 RIGNTTEFNTQKLLNATSGTVTAASAATVTGSAITLGGGTDFSTTNLVFDVVIGSTTKSV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T G + + + +V + + TT +KAA +
Sbjct: 183 TLNKNYDGSTNTIDTLVSDLNTALSGAATVSKDTNGTALVITAANTTDSIEIKAATSGNL 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A G+ A ++ G + S++
Sbjct: 243 SAIGLTAGVYSPNPAKSSFTMQIGANQSQT------------------------------ 272
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T + D + L S N +
Sbjct: 273 ------------MTLEFNDMRAAALGLTGTGAGYTSSAGVTDGTNNNGVEYGLDVSNATN 320
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
V+ I I +A K+G+ +R+ + + + + R+ D D A
Sbjct: 321 AGIAVTKIQAAIDKVSAERSKLGAYQNRLEHTINNLGTSSENLTSAESRIRDVDYAKA 378
>gi|107100542|ref|ZP_01364460.1| hypothetical protein PaerPA_01001567 [Pseudomonas aeruginosa PACS2]
Length = 399
Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats.
Identities = 62/450 (13%), Positives = 122/450 (27%), Gaps = 58/450 (12%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + + +L R+S+G R++ A D+AA IA + S L+
Sbjct: 8 LTVNTNIASLNTQRNLNNSSASLNTSLQRLSTGSRINSAKDDAAGLQIANRLTSQVNGLN 67
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
A Q+ LQ
Sbjct: 68 ----------------------------------VATKNANDGISLAQTAEGALQQSTNI 93
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ R + ++ ++ S ++ V D T L + + S
Sbjct: 94 LQRMRDLSLQSANGSNSDSERTALNGEVKQLQKELDRISNTTTFGGRKLLDGSFGVASFQ 153
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
G+ ++ + + + T +T
Sbjct: 154 VGSAANEIISVGIDEMSAESLNGTYFKADGGGAVTAATASGT------------------ 195
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + + + + A+A N + T
Sbjct: 196 ------VDIAIGITGGSAVNVKVDMKGNETAEQAAAKIAAAVNDANVGIGAFSDGDTISY 249
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
T S + + +
Sbjct: 250 VSKAGKDGSGAITSAVSGVVIADTGSTGVGTAAGVAPSATAFAKTNDTVAKIDISTAKGA 309
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ V ID IK A +G++ +R + +K + + V GR+ D D A+E+
Sbjct: 310 QSAVLVIDEAIKQIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDFAAETAN 369
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ L+ N +LSL R
Sbjct: 370 LTKNQVLQQAGTAILAQANQLPQSVLSLLR 399
>gi|157056868|gb|ABV02451.1| flagellin A [Arcobacter nitrofigilis DSM 7299]
Length = 498
Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats.
Identities = 70/496 (14%), Positives = 147/496 (29%), Gaps = 48/496 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + + N + +R+S+GL+V+ A+D+A+ +IA +++ ++S
Sbjct: 3 INTNIASLNAQEAAANTNKKIATSLERLSTGLKVNKASDDASGLAIADKLRTQASSISQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
D + + IA MS+ +++ T+K K+ T ++I+ +I +L QL
Sbjct: 63 IDNGNSAVALIQIADKSMSEQSNILDTVKAKLIQANTDTTSPDGREAIRKDIVKLLEQLD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL--- 177
+IA+ +S+NG L+ S ++SI +DD K +
Sbjct: 123 NIAQQTSYNGITLLQDSYDSMSSSIELKFQIGGNKDDIMKSSFIQSNTVGLGGGQGALDQ 182
Query: 178 --DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
SST L + D + I+ + L
Sbjct: 183 VSGSSTRNNVISQGLSTVISGDGTNPITLDGYATGTAIKVNITGIPGDITANGPTELSKV 242
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
++T A + + S + + +T
Sbjct: 243 DSTTQLVLEALANATSGVNGSPATVEVKDINDRVIGTFTLETPPGTSIASGLVMHSTPGL 302
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
+ + + S + + + +A
Sbjct: 303 NGAEPIVTFSLASGATIGMGGKTINTVEIAGDPLNTFTIGAMTISQTSASGNITFDANAQ 362
Query: 356 N----------------------------------------EKLAMEEMVSFIDTQIKCA 375
N + + +D +
Sbjct: 363 NLNIQNLNSANGQELKVTTATGSITGGGTLAGLKALQAGQLTQKQAVKYQGIVDAALSQM 422
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+GS +++ + + V + D D A E + Q A
Sbjct: 423 NIYRSDLGSTQNQVESAVRNLMTQKTNVTAAESVIRDVDYAQEFANFNKQNIIAQAGNYA 482
Query: 436 LSIVNNSTARILSLFR 451
+S N+ +L L +
Sbjct: 483 MSQANSVAQNVLRLLQ 498
>gi|209967003|ref|YP_002299918.1| flagellar protein Laf1 (LafA or FlaB) [Rhodospirillum centenum SW]
gi|209960469|gb|ACJ01106.1| flagellar protein Laf1 (LafA or FlaB) [Rhodospirillum centenum SW]
Length = 435
Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats.
Identities = 100/449 (22%), Positives = 175/449 (38%), Gaps = 17/449 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI+TN A +A + L I+ +L+ Q R+ SGL+V+ A+D+ A +SIAQ ++ + L A
Sbjct: 4 SIVTNSGAQAAIRSLFTIDRDLKTTQGRIESGLKVNKASDDPAVFSIAQGIRGNVSGLKA 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
V + + GS+ + A SK D ++ +K IT G ++G D ++ +++ + S +
Sbjct: 64 VQEGLAFGSAVLGTASKAASKISDELNELKKTITQGQQQGLDKDALNTQVERALSLIDTY 123
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A S++ G N ++++ G + + L ++ +D+
Sbjct: 124 ASSSTYMGVNLMKSETGGDIVDTELTFLTDISGRSISISNQQFTSKDLGLSSLDIDAGGV 183
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
G+ + + AS T T Q+
Sbjct: 184 RFNLEGVTLTSASRIEVGGKTFEFTNDEALASATSIAVSINGLT-------------TQS 230
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
+ + L A S + A + + G T + +
Sbjct: 231 EIKDKLASTLRANGLGARVNKDGSVDVFGAAAGNVSLTSDGIRGSAAGTTAGLTYDATNK 290
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
++ A + + T A K
Sbjct: 291 VYSANQAATASAPAAAERSDAFYVQILGATAVDAESSGTGETTDTSAAEQY----KNVKS 346
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
++ +D+ I A IG+I ++ ++F K + D + +G+G LVDADMA ES RL
Sbjct: 347 SAIATVDSAITLAGQKLATIGAIQRQVSGLQEFTKTLSDTLNEGLGALVDADMADESARL 406
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
ALQT+QQLA+Q+LSI N +L LFR
Sbjct: 407 QALQTRQQLAIQSLSIANQQPQALLGLFR 435
>gi|90418590|ref|ZP_01226501.1| putative flagellin protein [Aurantimonas manganoxydans SI85-9A1]
gi|90336670|gb|EAS50375.1| putative flagellin protein [Aurantimonas manganoxydans SI85-9A1]
Length = 422
Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats.
Identities = 147/451 (32%), Positives = 200/451 (44%), Gaps = 29/451 (6%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI+TN SAM+A + L N L Q R+S+G RV+ AADNAAYWSIA M+SDN +L
Sbjct: 1 MTSIITNSSAMTALKTLSATNAALSATQSRISTGFRVAVAADNAAYWSIATTMRSDNNSL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG +K+D A GM+ AID++ IK K+ A E G D +QSEITQLQ QL
Sbjct: 61 SAVQDALGLGMAKIDTAYTGMTAAIDLVDEIKAKLVAAREPGVDRAKVQSEITQLQEQLI 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A SSF+GENWL + + + KS++ SF R +G V I TID + S+
Sbjct: 121 STAAASSFSGENWLSVNSDDTGYNATKSIVSSFNRSSSGAVSIGTIDIDASRIALFDGSA 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + V S T + AN
Sbjct: 181 TADGLLDAGAATGPLSSIGGLVEDSGTGVPGVRFNFSSFALSAAETVNFDLALGANPART 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A I L ++ +T++ + +
Sbjct: 241 ITIDKALIDATLGSSDGTVSTSAAMKSVLDAAFTNAGYVS-------------------- 280
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + + P I + T A +
Sbjct: 281 ---------WGDFDNVDLGGVIDINNMPASGPVAITNLTLTATGTSGITAIDITNASSIE 331
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+E +S +D + AA +G+ R Q F+ ++D +++GVG LVDADM EST
Sbjct: 332 IEGHISSVDAMLGKMITAAADLGAARKRAENQSTFVSNLKDTIDRGVGTLVDADMNKEST 391
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQ QQQL VQALSI N ++ ILSLFR
Sbjct: 392 RLKALQVQQQLGVQALSIANGNSQSILSLFR 422
>gi|28372322|dbj|BAC56986.1| flagellin [Campylobacter lari]
Length = 500
Score = 163 bits (411), Expect = 5e-38, Method: Composition-based stats.
Identities = 83/497 (16%), Positives = 154/497 (30%), Gaps = 49/497 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA +K+ L
Sbjct: 4 INTNGASLNAQVNAGMNSRALDSSLARLSSGLRINSAADDASGLAIADNLKTQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ +S + IA M + + ++ TIK K T + G IQ EIT+L +L
Sbjct: 64 INNANDANSMLQIADKAMDEQLKILDTIKVKATQAAQDGQSAKTRAMIQGEITKLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTA-------SIAKSVIGSFIRDDNGKVQITTIDYYLDPE 173
+IA +++NG+ L + + IG+ G+ + T
Sbjct: 124 NIANTTTYNGKQLLSGSFANQKFQIGDKANQTINATIGATYSAKIGQSRFETGQTITAST 183
Query: 174 TVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG---- 229
+ + + I + + + I+ + +
Sbjct: 184 GTASITIKNYDGINDYKFQAVTISTSAGTGLGALAAEINKASDITGVRATAIVQTVSSGA 243
Query: 230 -----------------------------------AWLKAANATFDQAKGIATIPVPLPA 254
K + + + +
Sbjct: 244 IGASGTTGDDFAINGVVIGKVNYKANDKEGALVSAINAKKDTTGVEASIVDGKLVLNSID 303
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
T S SG AA+ V+ + I S + V G T
Sbjct: 304 GRGINITGSVGSGLSGDGAAAANLLRENYGRLSLVKNDGSDIIISGTTASLLGVGSGGTT 363
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ +M T + T ++ DT I
Sbjct: 364 AEATVNLESVKGQISADMASAMGFNAMTTATNITSSKTAGVTTLQGAMAVMDIADTAIAN 423
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
IG+ ++I + I + + V+ ++ D D ASES S Q
Sbjct: 424 LDTIRANIGATQNQITSTINNISVTQVNVKAAESQIRDVDFASESANYSKANILAQSGSY 483
Query: 435 ALSIVNNSTARILSLFR 451
A++ N ++ +L L +
Sbjct: 484 AMAQANAASQNVLRLLQ 500
>gi|87242438|gb|ABD33758.1| flagellin [Bacillus thuringiensis serovar rongseni]
Length = 417
Score = 163 bits (411), Expect = 6e-38, Method: Composition-based stats.
Identities = 58/417 (13%), Positives = 141/417 (33%), Gaps = 5/417 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + +
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ G + K++ E + L+ Q+ I++ + FN + L +
Sbjct: 61 NSVSNILLRMRDIANQSANGTNTGDNQKALDKEFSALKEQIDYISKNTEFNDKKLLNGEN 120
Query: 139 GSSTASI--AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
S + + + + L + G + + +
Sbjct: 121 TSIAIQTLDSADTAKQININLADTSTSSLLIDKLSISGAGAGKALVGVDAGDIAKATTEQ 180
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
K + + D + +F A T K + + A
Sbjct: 181 KALSALAVGASTTEMDTAVGKFKTEFDKVKDGLTAEDAEKVTAAIEKYSNSKTLENANAI 240
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
T + S + A T + + + A+ + T+ + G +
Sbjct: 241 GDLYKTMTPADSTKVTSATGTTGKALIDLNTTSGASATDRQTAVDNFKKDFDLIKGGLNP 300
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
+ T + + + A A + K + + ID ++
Sbjct: 301 QDAAKVTAALDKFNKADGSGNTLENAQEIGKVFAEVAAGSTKSNASDAIKSIDKALETIA 360
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R+ + +K ++ ++ DADMA E + ++ + + +
Sbjct: 361 SNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGI 417
>gi|87242464|gb|ABD33771.1| flagellin [Bacillus thuringiensis serovar azorensis]
Length = 417
Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats.
Identities = 58/417 (13%), Positives = 141/417 (33%), Gaps = 5/417 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + +
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ G + K++ E + L+ Q+ I++ + FN + L +
Sbjct: 61 NSVSNILLRMRDIANQSANGTNTGDNQKALDKEFSALKEQIDYISKNTEFNDKKLLNGEN 120
Query: 139 GSSTASI--AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
S + + + + L + G + + +
Sbjct: 121 TSIAIQTLDSADTAKQININLADTSTSSLLIDKLSISGAGAGKALVGVDAGDIAKAATEQ 180
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
K + + D + +F A T K + + A
Sbjct: 181 KALSALAVGASTTEMDTAVGKFKTEFDKVKDGLTAEDAEKVTAAIEKYSNSKTLENANAI 240
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
T + S + A T + + + A+ + T+ + G +
Sbjct: 241 GDLYKTMTPADSTKVTSATGTTGKALIDLNTTSGASATDRQTAVDNFKKDFDLIKGGLNP 300
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
+ T + + + A A + K + + ID ++
Sbjct: 301 QDAAKVTAALDKFNKADGSGNTLENAQEIGKVFAEVAAGSTKSNASDAIKSIDKALETIA 360
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R+ + +K ++ ++ DADMA E + ++ + + +
Sbjct: 361 SNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGI 417
>gi|239628970|ref|ZP_04672001.1| flagellin protein [Clostridiales bacterium 1_7_47_FAA]
gi|239519116|gb|EEQ58982.1| flagellin protein [Clostridiales bacterium 1_7_47FAA]
Length = 444
Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats.
Identities = 63/444 (14%), Positives = 124/444 (27%), Gaps = 45/444 (10%)
Query: 53 MKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT----DSKSI 108
M++ L+A SD S V A+ G+ + +++ ++ T D +++
Sbjct: 1 MRAQIKGLTAASDNSQDAISLVQTAEGGLQEVHSMLNRMQELATKSANGTYTDDVDRRAL 60
Query: 109 QSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK--------------------- 147
Q E+ L+ ++ IA ++FNG L +G T+
Sbjct: 61 QDEVNALKDEINRIADSTNFNGIKLLDGSMGVGTSGGVATGAVSGTQLKTANTDFTFTAP 120
Query: 148 ------------------SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGL 189
+ G L G +
Sbjct: 121 EGFKVIINSGAADDAEWTDNKTLTLTLTKGNTYSQADLDKLISGVKGTPDDAAGKISVTV 180
Query: 190 LDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIP 249
+ +I + + ++ AT +G K D A
Sbjct: 181 NKNFELDATGGGKIVEIASAAAVKASKTASGVTVSATKAGVNTKHLTFKKDDAGAYGATQ 240
Query: 250 VPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+T S S+ + A A + D +IT +
Sbjct: 241 GGDGNITVNLRSTQSYSASEINKMLADAGADMRVSFDGTKTGNDLQAITGGTTGGATAGQ 300
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN--EKLAMEEMVSF 367
+ + T D + ++ + ++ +S
Sbjct: 301 FDLDNGSGLSTGGGLKLQIGDTNDAWNQLELSISNMHVDSLGIGDIDIGDRDGASAAISK 360
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
I I + + GK+G+I +R+ + + + + + R+ D DMA E +
Sbjct: 361 ITDAINQVSTSRGKLGAIQNRLEHTINNLGVTTENITAAESRIRDVDMAKEMMEFTKNSV 420
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
Q A L+ N IL L +
Sbjct: 421 LMQSAQAMLAQANQQPQSILQLLQ 444
>gi|308185500|ref|YP_003929632.1| flagellin [Pantoea vagans C9-1]
gi|308055780|gb|ADO07950.1| Flagellin [Pantoea vagans C9-1]
Length = 483
Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats.
Identities = 55/481 (11%), Positives = 125/481 (25%), Gaps = 31/481 (6%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +I N +A ++ + L +R+SSG+R++ A D+AA +IA M ++ A
Sbjct: 1 MLTINHNETAAITNKLRYGTDSVLGRTVERLSSGMRINSAKDDAAGQAIANRMTANVNAD 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQS 117
+ V+ + S A G+ +D++ + D +S+ Q+ +
Sbjct: 61 AVVARGLNDAISYSQTASGGLGTIVDLLIQARTLSVQAANGTLSDADRQSVNGAYQQILA 120
Query: 118 QLRDIARGSSFNGENWLRTDL----------------------GSSTASIAKSVIGSFIR 155
+ ++A + G L TD S + + +
Sbjct: 121 GINEVADHTEIFGRYPLATDNPDLPPAKLGNVDPINVKFPVPGKSYSFTSGVIPLAYIPA 180
Query: 156 DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASG 215
D + + +
Sbjct: 181 GSTSISITIDSLGQDDDLQLFTRDGKHLAGTPLDGSAPDYTWTSKGITDAATADSRLLTS 240
Query: 216 TISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAA 275
+S + + + + + + SG +
Sbjct: 241 KNGFATGATYDSSQLLEGGPSWALAGSNSSSYNGMTITYSGDGDRYEDVASGDFNNGTNT 300
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
R+ + + + + +
Sbjct: 301 GTRLERISLDTVSEDLIVVVVGNGSFTGSLTWGILPEPKGVPATPPHESRPLEVITSADY 360
Query: 336 DSGYSMVTLNITRHA------NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRI 389
++ T N + + +D ++ + G+ +R
Sbjct: 361 GQPIQSDSIPATPSDTKTLGLNNTTLLTSDDISTTMKALDKALEKISGYQSLYGAKINRY 420
Query: 390 HLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
+ + R+ DAD A E+++L+ Q QQ + N + I+ L
Sbjct: 421 ESNRNVLSQQGVDTSAARSRIQDADYAEEASQLARSQIIQQGQTAVSKMANKTPEMIIQL 480
Query: 450 F 450
Sbjct: 481 L 481
>gi|33596120|ref|NP_883763.1| flagellin [Bordetella parapertussis 12822]
gi|33573123|emb|CAE36767.1| flagellin [Bordetella parapertussis]
Length = 392
Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats.
Identities = 69/453 (15%), Positives = 128/453 (28%), Gaps = 66/453 (14%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN+ ++ A L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 3 AVINTNYLSLVAQNNLNKSQSALGSAIERLSSGLRINSAKDDAAGQAIANRFTANVKGLT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S + +++ + + I+ +D SIQ E+ Q +
Sbjct: 63 QAARNANDGISIAQTTEGALNEINNNLQRIRELTVQASNGTNSASDIDSIQQEVNQRLEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG L+++ T SI + D Y
Sbjct: 123 INRIAEQTDFNGIKVLKSNATDMTLSIQVGAKDNETIDIKIDRNSNWNLYDAVGTVPGGT 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + L D
Sbjct: 183 VNGEARTVNALGFDVLSAVTTTIASSDTVT------------------------------ 212
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
A + AA AA S S + + + G + K+
Sbjct: 213 -----FDAAVAAAEQAAGAAVGDGSVVSYGDTANPQYAVVVDNAGTMTSYALTFDKDGKA 267
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ + ++ + + + + + +
Sbjct: 268 ALGDQLGAVASQAAEAAVGTNDVAAGANVTVSGGAADALSKLDDAMKAVDEQRSSLGAIQ 327
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
E V+ ++ I +AA R+ D+D A+E
Sbjct: 328 NRFESTVANLNNTITNLSAARS----------------------------RIEDSDYATE 359
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ Q QQ L+ N +LSL R
Sbjct: 360 VSNMTKNQILQQAGTSVLAQANQVPQNVLSLLR 392
>gi|22002042|sp|P21184|FLICA_PSEAE RecName: Full=A-type flagellin
gi|30692052|gb|AAP33171.1| FliC [Pseudomonas aeruginosa]
gi|30692057|gb|AAP33172.1| FliC [Pseudomonas aeruginosa]
Length = 394
Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats.
Identities = 62/450 (13%), Positives = 122/450 (27%), Gaps = 58/450 (12%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + + +L R+S+G R++ A D+AA IA + S L+
Sbjct: 3 LTVNTNIASLNTQRNLNNSSASLNTSLQRLSTGSRINSAKDDAAGLQIANRLTSQVNGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
A Q+ LQ
Sbjct: 63 ----------------------------------VATKNANDGISLAQTAEGALQQSTNI 88
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ R + ++ ++ S ++ V D T L + + S
Sbjct: 89 LQRMRDLSLQSANGSNSDSERTALNGEVKQLQKELDRISNTTTFGGRKLLDGSFGVASFQ 148
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
G+ ++ + + + T +T
Sbjct: 149 VGSAANEIISVGIDEMSAESLNGTYFKADGGGAVTAATASGT------------------ 190
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + + + + A+A N + T
Sbjct: 191 ------VDIAIGITGGSAVNVKVDMKGNETAEQAAAKIAAAVNDANVGIGAFSDGDTISY 244
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
T S + + +
Sbjct: 245 VSKAGKDGSGAITSAVSGVVIADTGSTGVGTAAGVTPSATAFAKTNDTVAKIDISTAKGA 304
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ V ID IK A +G++ +R + +K + + V GR+ D D A+E+
Sbjct: 305 QSAVLVIDEAIKQIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDFAAETAN 364
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ L+ N +LSL R
Sbjct: 365 LTKNQVLQQAGTAILAQANQLPQSVLSLLR 394
>gi|87242448|gb|ABD33763.1| flagellin [Bacillus thuringiensis serovar zhaodongensis]
Length = 417
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 57/417 (13%), Positives = 140/417 (33%), Gaps = 5/417 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + +
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + K++ E + L+ Q+ I++ + FN + L +
Sbjct: 61 NSVSNILLRMRDIANQSANGTNAGDNQKALDKEFSALKEQIDYISKNTEFNDKKLLNGEN 120
Query: 139 GSSTASI--AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
S + + + + L + G + + +
Sbjct: 121 TSIAIQTLDSADTAKQININLADTSTSSLLIDKLSISGAGAGKALVGVDAGDIAKATTEQ 180
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
K + + D + +F A T K + + A
Sbjct: 181 KALSALAVGASTTEMDTAVGKFKTEFDKVKDGLTAEDAEKVTAAIEKYSNSKTLENANAI 240
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
T + S + A T + + + A+ + T+ + G +
Sbjct: 241 GDLYKTMTPADSTKVTSATGTTGKALIDLNTTSGASATDRQTAVDNFKKDFDLIKGGLNP 300
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
+ T + + + A A + K + + ID ++
Sbjct: 301 QDAAKVTAALDKFNKADGSGNTLEDAQEIGKVFAEVAAGSTKSNASDAIKSIDKALETIA 360
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R+ + +K ++ ++ DADMA E + ++ + + +
Sbjct: 361 SNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGI 417
>gi|30692048|gb|AAP33170.1| FliC [Pseudomonas aeruginosa]
gi|126165550|gb|ABN80232.1| FliC [Pseudomonas aeruginosa]
gi|261863284|gb|ACY01188.1| flagellin [Pseudomonas aeruginosa]
Length = 394
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 62/450 (13%), Positives = 122/450 (27%), Gaps = 58/450 (12%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + + +L R+S+G R++ A D+AA IA + S L+
Sbjct: 3 LTVNTNIASLNTQRNLNNSSASLNTSLQRLSTGSRINSAKDDAAGLQIANRLTSQVNGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
A Q+ LQ
Sbjct: 63 ----------------------------------VATKNANDGISLAQTAEGALQQSTNI 88
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ R + ++ ++ S ++ V D T L + + S
Sbjct: 89 LQRMRDLSLQSANGSNSDSERTALNGEVKQLQKELDRISNTTTFGGRKLLDGSFGVASFQ 148
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
G+ ++ + + + T +T
Sbjct: 149 VGSAANEIISVGIDEMSAESLNGTYFKADGGGAVTAATASGT------------------ 190
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + + + + A+A N + T
Sbjct: 191 ------VDIAIGITGGSAVNVKVDMKGNETAEQAAAKIAAAVNDANVGIGAFSDGDTISY 244
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
T S + + +
Sbjct: 245 VSKAGKDGSGAITSAVSGVVIADTGSTGVGTAAGVAPSATAFAKTNDTVAKIDISTAKGA 304
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ V ID IK A +G++ +R + +K + + V GR+ D D A+E+
Sbjct: 305 QSAVLVIDEAIKQIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDFAAETAN 364
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ L+ N +LSL R
Sbjct: 365 LTKNQVLQQAGTAILAQANQLPQSVLSLLR 394
>gi|150395493|ref|YP_001325960.1| flagellin domain-containing protein [Sinorhizobium medicae WSM419]
gi|150027008|gb|ABR59125.1| flagellin domain protein [Sinorhizobium medicae WSM419]
Length = 395
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 165/451 (36%), Positives = 229/451 (50%), Gaps = 56/451 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AM+A Q LR I N+E Q VSSGLRV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNIAAMAALQTLRTIGSNMEETQAHVSSGLRVGQAADNAAYWSIATTMRSDNMAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG++KVD A +GM AI+V+ IK K+ A E G D IQ EI QL+ QL
Sbjct: 61 SAVQDALGLGAAKVDTAYSGMESAIEVVKEIKKKLVAATEDGVDKAKIQEEIDQLKDQLT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ +SF+GENWL+ DL ++ KSV+GSF+RD +G V + +DY L+ +VL D
Sbjct: 121 SISEAASFSGENWLQADLS--GGAVIKSVVGSFVRDASGAVSVKKVDYSLNTNSVLFD-- 176
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T +
Sbjct: 177 ---------------------------------------------TVGDTGILDKVYDVS 191
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
QA TI A+ S S +++ + ++ GNS + V + T+
Sbjct: 192 QASVTLTINTNGVASQHTVAAYSLESLTEAGAEFQGNYALQGGNSYVKVENVWVRAETAA 251
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G T +A + +S +D + +G S+ +NI
Sbjct: 252 AGATGQELAATTTAAGTITADSWVVDVDNAPAVSVSAGQSVAGINIVGMGAAALDALISG 311
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ++ + + A +GSI+ RI LQ DF+ + D+++ GVGRLVDADM EST
Sbjct: 312 VDAALTDMTSA-------AADLGSIAMRIDLQSDFVNKLSDSIDSGVGRLVDADMNEEST 364
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQTQQQLA+Q+LSI N+++ +L+LFR
Sbjct: 365 RLKALQTQQQLAIQSLSIANSASESVLTLFR 395
>gi|86211138|gb|ABC87266.1| flagellin [Xanthomonas campestris pv. campestris]
Length = 400
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 65/452 (14%), Positives = 129/452 (28%), Gaps = 58/452 (12%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + +++ R+SSGLR++ A D+AA +I++ + L
Sbjct: 4 VINTNVMSLNAQRNLNTSSASMQTSIQRLSSGLRINSAKDDAAGLAISERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S A+ M + + I+ +D ++ SE+ QL +++
Sbjct: 64 ASRNANDGISLAQTAEGAMVEIGSNLQRIRELSVQSSNATNSASDRDALNSEVKQLTAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A ++FNG L + + + + + + ++ V
Sbjct: 124 DRVANQTNFNGTKLLNGEFSGALFQVGADAGQTIGINSIVDANVDSLGKASFAAAVSGAG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T G + + G T + A + T
Sbjct: 184 VTGTATAAGTVSGISLTFNDASGSAKTIAIADVKVGVGDTAADVNKKVAAAINDKLDQTG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A A + A + S S + + S + S
Sbjct: 244 MYASVSADGATVTVESLKAGQDFTSLSAGGSSATGITVGAGIQTASAASGSTASTLSSLD 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
++ S A S+ D +
Sbjct: 304 ISTFSGSQKALEIVDKALTAVNSSRAD---------------------------MGAVQN 336
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ + + +A+ R+ D D A E+
Sbjct: 337 RFTSTIANLSATSENLSASRS----------------------------RIRDTDYAKET 368
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ L+ + +LSL +
Sbjct: 369 AELTRTQILQQAGTAMLAQAKSVPQNVLSLLQ 400
>gi|94314171|ref|YP_587380.1| flagellar filament structural protein [Cupriavidus metallidurans
CH34]
gi|93358023|gb|ABF12111.1| flagellar filament structural protein (flagellin) [Cupriavidus
metallidurans CH34]
Length = 398
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 62/449 (13%), Positives = 131/449 (29%), Gaps = 54/449 (12%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLMTQNNLNTSQSALNTAIQRLSSGLRINSAKDDAAGLAIASRFTSNINGLTV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
G S + +++ + + I++ + S++ +Q ++
Sbjct: 64 AQRNANDGISLAQTTEGALTEVTNNLQRIRDLSVQAANGS----NSASDLKSIQDEITQR 119
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
S
Sbjct: 120 MSEID--------------------------------------------------RLSAQ 129
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + V QV ++ ISTK L + + + A A
Sbjct: 130 TDFNGVKVLSSTAKSVNIQVGAQDGQTIAVNLQEISTKTLGLNSFNVNGPQGAVTAATAA 189
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
++ G + + + +++S+ I +
Sbjct: 190 NFQKVFGSSTTFTTSSITEAVGGTLATTLGISSSSVAIGNQAMVDANGNWFAQVTVTPAS 249
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
T + K + T+ + + + + + T + A
Sbjct: 250 ATEAQALKNQGMTTATSGSAMTMYVALNPNSTTSTTGATASFTLNTTGVTASTLTGSASA 309
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
++ +D ++ + +G+I +R+ + + R+ DAD A+E + +
Sbjct: 310 NPLATLDNALQTVNSLRSSLGAIQNRLDSTISNLGTTITNLSSSRSRIQDADYATEVSNM 369
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ QQ L+ N +T +LSL R
Sbjct: 370 TRANILQQAGTSVLAQANQTTQGVLSLLR 398
>gi|33601518|ref|NP_889078.1| flagellin [Bordetella bronchiseptica RB50]
gi|729510|sp|Q06064|FLAA_BORBR RecName: Full=Flagellin
gi|289454|gb|AAA22977.1| flagellin [Bordetella bronchiseptica]
gi|33575954|emb|CAE33033.1| flagellin [Bordetella bronchiseptica RB50]
Length = 391
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 68/453 (15%), Positives = 127/453 (28%), Gaps = 67/453 (14%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN+ ++ A L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 3 AVINTNYLSLVAQNNLNKSQSALGSAIERLSSGLRINSAKDDAAGQAIANRFTANVKGLT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S + +++ + + I+ +D SIQ E+ Q +
Sbjct: 63 QAARNANDGISIAQTTEGALNEINNNLQRIRELTVQASNGTNSASDIDSIQQEVNQRLEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG L+++ T SI + D Y
Sbjct: 123 INRIAEQTDFNGIKVLKSNATDMTLSIQVGAKDNETIDIKIDRNSNWNLYDAVGTVPGGT 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + L
Sbjct: 183 VNGEARTVNALGFDVLSAVTTTIASDT--------------------------------- 209
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
A + AA AA S S + + + G + K+
Sbjct: 210 ---VTFDAAVAAAEQAAGAAVGDGSVVSYGDTANPQYAVVVDNAGTMTSYALTFDKDGKA 266
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ + ++ + + + + + +
Sbjct: 267 ALGDQLGAVASQAAEAAVGTNDVAAGANVTVSGGAADALSKLDDAMKAVDEQRSSLGAIQ 326
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
E V+ ++ I +AA R+ D+D A+E
Sbjct: 327 NRFESTVANLNNTITNLSAARS----------------------------RIEDSDYATE 358
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ Q QQ L+ N +LSL R
Sbjct: 359 VSNMTKNQILQQAGTSVLAQANQVPQNVLSLLR 391
>gi|307318919|ref|ZP_07598350.1| flagellin domain protein [Sinorhizobium meliloti AK83]
gi|306895333|gb|EFN26088.1| flagellin domain protein [Sinorhizobium meliloti AK83]
Length = 395
Score = 162 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 143/451 (31%), Positives = 200/451 (44%), Gaps = 56/451 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN+SAM+A LR I+ ++E Q R+SSGLRV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNNSAMAALSTLRSISSSMEDTQSRISSGLRVGSASDNAAYWSIATTMRSDNQAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG++KVD A +GM AI+V+ IK K+ A E G D IQ EITQL+ QL
Sbjct: 61 SAVQDALGLGAAKVDTAYSGMESAIEVVKEIKAKLVAATEDGVDKAKIQEEITQLKDQLT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SF+GENWL+ DL + + + V+ +
Sbjct: 121 SIADAASFSGENWLQADLSGGAVTKSVVGSFVRDASGSVAVKKVDYSLNANSVLFDTVGD 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T ++ + + + +V S T+ + A +
Sbjct: 181 TGILDKVYNVSQASVTLTVNTNGVESQHTVAAYSLESLTEAGAEFQGNYALQGGNSYVKV 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + A T+ +G+ + +
Sbjct: 241 ENVWVRAETAATGATGQEIAATTTAAGTITADSWVVDVGNAPAANVSA------------ 288
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G S+ +NI
Sbjct: 289 -------------------------------------GQSVANINIVGMGAAALDALISG 311
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ++ + + GSISSRI LQ +F+ + D++E GVGRLVDADM EST
Sbjct: 312 VDAALTDMTSAAASL-------GSISSRIDLQSEFVNKLSDSIESGVGRLVDADMNEEST 364
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQTQQQLA+QALSI N+ + +LSLFR
Sbjct: 365 RLKALQTQQQLAIQALSIANSDSQNVLSLFR 395
>gi|170743241|ref|YP_001771896.1| flagellin domain-containing protein [Methylobacterium sp. 4-46]
gi|168197515|gb|ACA19462.1| flagellin domain protein [Methylobacterium sp. 4-46]
Length = 461
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 125/461 (27%), Positives = 203/461 (44%), Gaps = 10/461 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTS+LTN +AM+A L+ IN L+ +RVS+G RVS+AADNAAYWSIA +++DN +L
Sbjct: 1 MTSLLTNSAAMTALTTLKSINIQLDTTSNRVSTGQRVSNAADNAAYWSIATTVRTDNSSL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV D++GLG+S +D A G++ + + I+ K+ + G D +Q+EI LQS+++
Sbjct: 61 GAVKDSLGLGASTIDTAYNGLNSILTDLQNIRAKLQTATQAGVDRAKVQTEIAALQSKMK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL---------- 170
A S +G+NW+ D +S + ++ F RD G + + ++ +
Sbjct: 121 ATANSSVSSGQNWISVDSSASDYQAIRKIVAGFSRDSAGAINFSYVNVDVGSIKLLDANS 180
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
+ +S L V + + T +
Sbjct: 181 SASVTVPATSGQVFGSTSLTGTTAFTGGTADFSAAQTVELTITTETGNATIKLDKAALTT 240
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVR 290
K A + S T+G + + + V
Sbjct: 241 AAKDLTKVTTNEFLSALNNAISASTLTTAGVPSVTAGLDTAGRLTFTRTATGATNTVKVD 300
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
T N++ G + T + T+ T LD+ ++ +
Sbjct: 301 TTANNTVDIGFGAASVTGSVAKGTNATTTTGKGLLDTSNGTYTAGGGMSGSYSVVNFDIS 360
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
N + +++ ID I T A K+G+ +++ Q+ F+ + A +G L
Sbjct: 361 KLVGTNGDTDVANIITMIDQVIGKVTDAGTKLGAAKTQVDGQKTFVDTLMKANTATIGTL 420
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
VDAD+ EST+L ALQTQQQLAVQ+LSI N+S+ +LSLFR
Sbjct: 421 VDADIEEESTKLKALQTQQQLAVQSLSIANSSSQNLLSLFR 461
>gi|325520736|gb|EGC99763.1| flagellin [Burkholderia sp. TJI49]
Length = 506
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 76/506 (15%), Positives = 154/506 (30%), Gaps = 55/506 (10%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +I+ M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQNALSQAITRLSSGKRINSAADDAAGLAISTRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A +G+S+ + I+ +D +++Q E+TQ +
Sbjct: 61 NQGVSNANDGVSMIQTATSGLSQITSSLQRIRQLAVQASSGSLSTSDQQALQQEVTQQIA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRD--------------------- 156
++ IA +++NG+N L G+ + + +V + +
Sbjct: 121 EVNRIASQTNYNGKNVLDGSAGNISFQVGANVGQTINLNLTQSLSAASLGTGLPTKGSTL 180
Query: 157 --------------DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
G + + TD + +
Sbjct: 181 GQLTGLSLDSSGAATTGSATPAVTTINILADGKGGFQFTDQNNQALSSTAVTNLFGSTTA 240
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+++ A+G + + A ++ + A V A T
Sbjct: 241 GSGTALALTAAAGGALGTITSVPAAASAATTSSVNAINTANAGNGSTVAGRATAGTVLGT 300
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
S + + I V + T N+ +
Sbjct: 301 VTGLSLDSNGGYIAPNESGATITSISVLSDGAGGFTFKDQNGNALSNTGNVITNVFSINA 360
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL-----------------AMEEMV 365
T + L G + A+ + N + +
Sbjct: 361 ATTTAGASLTLNGTIGTATTNATTQGLASQSSINSANLANVPPRVADIDISTTAGANQAM 420
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID + +G+ +R + + + ++ DA+ A E+ LS
Sbjct: 421 ESIDNALATVNNIQASLGAAQNRFTAISTTQQAQATNLSQAQSQIQDANFAQETANLSKA 480
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ + L+ N+ ++L L +
Sbjct: 481 QVLQQAGISVLAQANSLPQQVLKLLQ 506
>gi|50082707|gb|AAT70051.1| flagellin [Pectinatus cerevisiiphilus]
Length = 430
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 65/436 (14%), Positives = 151/436 (34%), Gaps = 6/436 (1%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A++ + + L +VSSG++++ AADN A ++I++ M++ +L +
Sbjct: 1 ALNTLNIMGTNSNALSKSLQKVSSGMKINSAADNPAGYAISERMRTQIRSLDQDNQNAKN 60
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFN 129
G + + A+ +S +D++ T+K K+ + + + + I ++ +
Sbjct: 61 GQNMLKTAEGAVSSTVDILKTLKEKVLDAANDTNTTFDRNTIQDYMNQAIDQINDNANAS 120
Query: 130 GENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGL 189
L D + A+ +V + + + +D L+ T
Sbjct: 121 YNGKLLVDGSMNKATAGATVTYTNESLGTATDFGSALTDLVDRNGNSLNILDKDTVSISY 180
Query: 190 LDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIP 249
+ + V V+ + + + + S A + A+G+
Sbjct: 181 VVNGKTMTTSFSVGSSKLSDVFGSVTSATGYSDFANSVSFGNTFADSQIGTTAEGLMMHT 240
Query: 250 VPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ A ++ SG G+ + I + +D V+ + + + + ++
Sbjct: 241 ADGTSVLAISSSASGVGGNIAGFT------ISITGTDGNVKKSVNSKLDAWSEQISAQDK 294
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
N R L + ++ + ++ +D
Sbjct: 295 SNDNAVTMQIGTKANQSIRVGLSDMRAQALGLQGVSTDGSVQNLDITTRANANASINVLD 354
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
++ A KIGS+ +R+ +D + + V+ + DADMA E T +
Sbjct: 355 NAVQKALKEQTKIGSVENRLDYTQDNLTTQSENVQASESTIRDADMAKEMTEYTKNNVLM 414
Query: 430 QLAVQALSIVNNSTAR 445
Q + L+ N S+
Sbjct: 415 QASQAMLAHANQSSQN 430
>gi|260429308|ref|ZP_05783285.1| flagellin domain protein [Citreicella sp. SE45]
gi|260419931|gb|EEX13184.1| flagellin domain protein [Citreicella sp. SE45]
Length = 436
Score = 161 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 110/451 (24%), Positives = 175/451 (38%), Gaps = 15/451 (3%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ IN NL + Q +S+G V+ A DNAA W+IA++M++D
Sbjct: 1 MSSILTNNGAMVALQTLKSINNNLAMTQGEISTGKSVATAKDNAAVWAIAKVMEADVKGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+SD++ LG S V +A++ D+++ IK KI A E D IQ++I L+ Q+
Sbjct: 61 KGISDSLNLGQSTVAVARSASETVTDLLTEIKGKIVASQEENVDRAKIQTDIDALRDQIS 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + FNG N L ++ + + T+ +
Sbjct: 121 AVVGAAQFNGLNLLSNVDDTAGSGSVNVLASLDRSGTGVAASDITVQKQDLGTGAAAIAG 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + DI + + T + +
Sbjct: 181 TVAATDLNAAVDTLTLNATQSDTIDIGTTNSGFEAGTAYALNIFGTDADNSTFTQTDYRE 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
AT + T+ + + A+ N S
Sbjct: 241 TTAAGATAAEAPNLSVVYVAREGDTAADVAKGLQAAFKTFMADNGLDTDVVDATVSGD-- 298
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T + + + D+ + +DS + +
Sbjct: 299 -------------TLTFTSSLTDGTDTIQVNLVSVDSAAGNTIGGALEQLSNLDVTSQAG 345
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + I+ I+ + +A GS+ RI Q DF+ + D++ G+G LVDADM S
Sbjct: 346 ADSALDQIEGLIQTSIDSASAFGSVQGRIETQIDFVSSLTDSLRAGIGTLVDADMEEASA 405
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQ QQQL VQALSI N + +LSLFR
Sbjct: 406 RLQALQVQQQLGVQALSIANQAPQSLLSLFR 436
>gi|87242352|gb|ABD33715.1| flagellin [Bacillus thuringiensis serovar chanpaisis]
Length = 407
Score = 161 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 55/415 (13%), Positives = 132/415 (31%), Gaps = 11/415 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M+S L ++ G S + A + +
Sbjct: 1 AKMSTAMDRLSSGKRINNASDDAAGLAIATRMRSRESGLGVAANNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+++ +++ + ++Q E +LQ Q+ I+ + FN +N L
Sbjct: 61 GSVSNILLRMRDLANQSANGTNTNKNQVALQKEFAELQKQIDYISSNTQFNDKNLLDGSN 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ + ++G QI + + +D+ + G+ + ++
Sbjct: 121 KTINIQT--------LDSEDGSRQIGIELGSASTKALGIDTLSIGSTKVTQAAIDNADDT 172
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
++ + + T + + A + A A
Sbjct: 173 IKKLDTGSSADEVAKAKKAFDEIKDALTDADSRELAKAFDNYDNASTGSKGTAAEAIATA 232
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
+ + +K + + T + ++K
Sbjct: 233 YKKIATPATAKVSKEVYTEAADVIKGLTDKSTDTEVKAAQEQFNKIKDYLSKTQRNEIQK 292
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ + + T A + + ID IK
Sbjct: 293 AFNDYNPGGTPPVKAGTIATAFNTQVTAAPDFATAADESAANPLQAIKAIDAAIKNIADN 352
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ + +K ++ ++ DADMA E + ++ + + +
Sbjct: 353 RATLGATLNRLDFNVNNLKSQASSMASAASQVEDADMAKEMSEMTKFKILNEAGI 407
>gi|28372336|dbj|BAC56993.1| flagellin [Campylobacter lari]
Length = 500
Score = 161 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 76/497 (15%), Positives = 149/497 (29%), Gaps = 49/497 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA +K+ L
Sbjct: 4 INTNGASLNAQVNAGINSRALDSSLARLSSGLRINSAADDASGLAIADSLKTQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ +S + IA M + + ++ TIK K T + G IQ EI +L +L
Sbjct: 64 INNANDANSMLQIADKAMDEQLKILDTIKVKATQAAQDGQSAKTRAMIQGEINKLMEELD 123
Query: 121 DIARGSSFN--GENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY--------- 169
+IA +++N + + I +
Sbjct: 124 NIANTTTYNTGKQLLSGAYFSNQQFQIGDKANQTINATIGATYSAKIGQSRFETGQRITA 183
Query: 170 -----------------LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYD 212
+ T+ + T ++++ +S
Sbjct: 184 SRASITIKNYDGINDFKIQSVTLSTSAGTGLGALAAEINKSSDKTGVRATATVQTISSGA 243
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ +T A A ++ I + G S
Sbjct: 244 IGASGNTGDDFTINGVVIGKVAYKANDKDGALVSAINAKKDTTGVEASIVDGKLVLNSAD 303
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES---------- 322
+G+ A N ++ + G + + T S
Sbjct: 304 GRGIELSGSLGSGLSGDSAAIANLLSENYGRLSLVKNDGSDIIVSGTTASLLGVGSGGAT 363
Query: 323 --------TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ +M T + + T ++ DT I
Sbjct: 364 AEATVNLESVKGQIAADIASAMGFNAMSTADNIGKSKTAGVTTLQGAMAVMDIADTAIAN 423
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
IG+ +++ + I + + V+ ++ D D ASES S Q
Sbjct: 424 LDTIRANIGATQNQLTSTINNIAVTQVNVKAAESQIRDVDFASESANYSKANILAQSGSY 483
Query: 435 ALSIVNNSTARILSLFR 451
A++ N ++ +L L +
Sbjct: 484 AMAQANAASQNVLRLLQ 500
>gi|150395492|ref|YP_001325959.1| flagellin domain-containing protein [Sinorhizobium medicae WSM419]
gi|150027007|gb|ABR59124.1| flagellin domain protein [Sinorhizobium medicae WSM419]
Length = 395
Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats.
Identities = 141/451 (31%), Positives = 199/451 (44%), Gaps = 56/451 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN+SAM+A LR I+ ++E Q R+SSGLRV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNNSAMAALSTLRSISSSMEDTQSRISSGLRVGSASDNAAYWSIATTMRSDNQAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG++KVD A +GM AI+V+ IK K+ A E G D IQ EITQL+ QL
Sbjct: 61 SAVQDALGLGAAKVDTAYSGMESAIEVVKEIKAKLVAATEDGVDKAKIQEEITQLKDQLT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SF+GENWL+ DL + + + V+ +
Sbjct: 121 SIAEAASFSGENWLQADLSGGAVTKSVVGSFVRDASGSVSVKKVDYSLNANSVLFDTVGD 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T ++ + + + +V S T+ + A +
Sbjct: 181 TGILDKVYDVSQASVTLTVNTNGVESQHTVAAYSLESLTEAGAEFQGNYALQGGNSYVKV 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + A T+ +G+ + S
Sbjct: 241 ENVWVRAETATAGATGQEIAATTTAAGTITADSWVVDVDNAPAVSVSA------------ 288
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G S+ +NI
Sbjct: 289 -------------------------------------GQSVAGINIVGMGAAALDALISG 311
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ++ + + + ISSRI LQ +F+ + D+++ GVGRLVDADM EST
Sbjct: 312 VDAALTDMTSAAASLGS-------ISSRIDLQSEFVNKLSDSIDSGVGRLVDADMNEEST 364
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQTQQQLA+QALSI N+ + +LSLFR
Sbjct: 365 RLKALQTQQQLAIQALSIANSDSQNVLSLFR 395
>gi|33592146|ref|NP_879790.1| flagellin [Bordetella pertussis Tohama I]
gi|33571790|emb|CAE41297.1| flagellin [Bordetella pertussis Tohama I]
gi|332381562|gb|AEE66409.1| flagellin [Bordetella pertussis CS]
Length = 391
Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats.
Identities = 69/453 (15%), Positives = 130/453 (28%), Gaps = 67/453 (14%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN+ ++ A L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 3 AVINTNYLSLVAQNNLNKSQSALGSAIERLSSGLRINSAKDDAAGQAIANRFTANVKGLT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S + +++ + + I+ +D SIQ E+ Q +
Sbjct: 63 QAARNANDGISIAQTTEGALNEINNNLQRIRELTVQASNGTNSASDIDSIQQEVNQRLEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG L+++ T SI + D Y
Sbjct: 123 INRIAEQTDFNGIKVLKSNATDMTLSIQVGAKDNETIDIKIDRNSNWNLYDAVGTVPGGT 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + L +
Sbjct: 183 VNGEARTVNALGFDVLSAVTTTIASDTVT------------------------------- 211
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
A + AA AA S S + + + G + K+
Sbjct: 212 -----FDAAVAAAEQAAGAAAGDGSVVSYGDAANPQYAVVVDNAGTLTSYALTFDKDGKA 266
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ + ++ V+ ++ + + + +
Sbjct: 267 ALGDQLGAVASQAAEAAVGVNDVASGDNVTVSGGNANALSKLDDAMKAVDEQRSSLGAIQ 326
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
E V+ ++ I +AA +I D+D A+E
Sbjct: 327 NRFESTVANLNNTITNLSAARSRI----------------------------EDSDYATE 358
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ Q QQ L+ N +LSL R
Sbjct: 359 VSNMTKNQILQQAGTSVLAQANQVPQNVLSLLR 391
>gi|87242490|gb|ABD33784.1| flagellin [Bacillus weihenstephanensis]
Length = 408
Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats.
Identities = 55/415 (13%), Positives = 124/415 (29%), Gaps = 10/415 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M+S L+ ++ G S + A + +
Sbjct: 1 AKMSTAMDRLSSGKRINNASDDAAGLAIATRMRSRESGLNVAANNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++Q E +LQ Q+ IA + FN +N L
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTNKNQVAVQKEFAELQKQIDYIANNTQFNDKNLLDGSN 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ +D + + + + + N +
Sbjct: 121 KTINIQT-------LDSEDGSRQIGIQLGSASTKALGIDTLNIGSEKVTQADIDNTTDAM 173
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
+ + K K ++ A D +T +A
Sbjct: 174 TLLATPATAKEKNVEAARTAFDKIKHTLSAADAKSVEKAFEDYDVAPSTAKDAAASAIND 233
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
+ S S + G
Sbjct: 234 AFVATTKPTPAKVSKEVFTEAKEAITSLKDGATADQVQAAQQQFDKIKDYLTKGQRTDIQ 293
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ + + + T A ++ + + ID IK
Sbjct: 294 TAINEFDPAVAGKKGAHIATAFNTAVPADPAFATKADDQASNPLQAIQAIDAAIKNIADN 353
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ + +K ++ ++ DADMA E + ++ + + +
Sbjct: 354 RATLGATLNRLDFNVNNLKSQASSMASAASQVEDADMAKEMSEMTKFKILNEAGI 408
>gi|113911623|gb|ABI48293.1| Fla1 flagellin [Roseburia intestinalis]
Length = 445
Score = 160 bits (403), Expect = 5e-37, Method: Composition-based stats.
Identities = 60/442 (13%), Positives = 113/442 (25%), Gaps = 44/442 (9%)
Query: 51 QIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT----DSK 106
+ M+ L S G S V A+ +++ ++ + D K
Sbjct: 1 EKMRKQIRGLDKASSNAQDGVSSVQTAEGALTEVHSMLQRMNELAVQAANGTNSKDTDRK 60
Query: 107 SIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTI 166
+IQ EI QL +++ +A + FN L+ D G T ++ G + T
Sbjct: 61 AIQDEIDQLNTEIDRVAETTKFNEIYLLKGDDGEKTINMKAHDAGLKGTLTDNGDGTATF 120
Query: 167 DYYL---------------------------DPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ K V
Sbjct: 121 KMDALKAGDKVSIGGQTFSIGASTKELKDMLTTADIDTKHQDVVVNGDTYKYVAAKAAVT 180
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
D + + + G + + AA + G + + A
Sbjct: 181 TGTKADGNAAGWYKDGVVPADTGTGIVADADYADAAEFSTKVTSGTVKVGTKELSLIADN 240
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ +K+ A + + + N T + N ++
Sbjct: 241 DGDGVDDNNKNVISKEKAYSLAAAELLKANQIGDTQNQAKVGIDKNYTAMTLANATNTIE 300
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK-------------LAMEEMVS 366
+ T L + G N + A +
Sbjct: 301 IHTGTAKVANTLSFSLHVGADADMTNKITVDIDTMNSANLGIKGLNVTDKNGTAATYAID 360
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
I I ++ +G++ +R+ D + + R+ D DMA E S
Sbjct: 361 AISDAISKVSSQRSALGAVQNRLEHTIDNLDNISKNTSSAESRIRDTDMAKEMVNYSKNN 420
Query: 427 TQQQLAVQALSIVNNSTARILS 448
Q L+ N S +LS
Sbjct: 421 ILAQAGQSMLAQANQSNQGVLS 442
>gi|332669183|ref|YP_004452191.1| flagellin domain-containing protein [Cellulomonas fimi ATCC 484]
gi|332338221|gb|AEE44804.1| flagellin domain protein [Cellulomonas fimi ATCC 484]
Length = 391
Score = 160 bits (403), Expect = 5e-37, Method: Composition-based stats.
Identities = 68/453 (15%), Positives = 139/453 (30%), Gaps = 67/453 (14%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI N +A+++ + L + +L +++SSG R++ AAD+AA +I++ ++S G L
Sbjct: 3 LSINQNIAAVNSYRNLSNTQNDLSKSLEKLSSGFRINRAADDAAGLAISEGLRSQVGGLK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQ 118
+ G S V A+ +++ ++ +++ G + +I++E L +
Sbjct: 63 VAARNAQDGISVVQTAEGALTETHAILQRLRDLSVQGANDSNNDKARANIKTEADSLVKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I ++FNG L G+ +
Sbjct: 123 LGRIGNSTNFNGTKLLDGSAGTLHFQVGA------------------------------- 151
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
D + ++ + S+ D G +T T A T
Sbjct: 152 ------------DGDGNSRISVDLSGANVTSIADQLGAATTGSTMDVLTPTNVTGAFTFT 199
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ G + + A + T + ++ + + + + +
Sbjct: 200 TRETVGGNNVDTTITTASVGAAGSIKTVDDLAAALNKDTNFSKNLAASVNSDNQLVVTAK 259
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
A + S L + + ++ +
Sbjct: 260 DGAAVFGGNTAGTHASAGTGAAASVALVPGTTGLDFSTADAAQTSIGRIDAQIEAVSTAR 319
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+ M + ++ IK + + + SRI D DMASE
Sbjct: 320 AGLGAMQNRLEHTIKNINVSVENLSASESRI---------------------RDTDMASE 358
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q Q L+ N +LSL R
Sbjct: 359 MVSFTRAQILSQAGTAMLAQANQIPQGVLSLLR 391
>gi|87242466|gb|ABD33772.1| flagellin [Bacillus thuringiensis serovar balearica]
Length = 410
Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats.
Identities = 63/415 (15%), Positives = 140/415 (33%), Gaps = 8/415 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L+ ++ G S + A + +
Sbjct: 1 AKMSNSMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVAANNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+++ +++ + ++Q E +LQ Q+ I+ + FN +N L++D
Sbjct: 61 GSVSNILLRMRDLANQSANGTNTSDNQAAMQKEFAELQKQITYISENTQFNDKNLLQSDS 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ ++ S I + + ++ + T
Sbjct: 121 SINIQTLDSSDGNQQIGINLKSASLKSLGIDQLAIGASANPLAKATVDASEAVDKAT--- 177
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
V K SV + T + A + ++ A A AK T A
Sbjct: 178 --AVTKAFKESVIATADTGTGADKVSAGLAKDYINALPADKAAAKKAITDAGDTKAEDMI 235
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
+ + K + + + + + Y
Sbjct: 236 NKFDALEAAQKGKEAELTLATTASSQDSKATKLVDAYTQAKNNLDKPAKDYLDAKAVYEA 295
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
DT + + + K + + ++ A + VS ID +K
Sbjct: 296 DTSNAVNKQKLEDAKGVMENTAGSKDKVSTFETAKAAATNGTPLDAVSKIDAALKTVADN 355
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ + +K ++ ++ DADMA E + ++ + + +
Sbjct: 356 RATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGI 410
>gi|87242398|gb|ABD33738.1| flagellin [Bacillus thuringiensis serovar shandongiensis]
Length = 410
Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats.
Identities = 63/415 (15%), Positives = 137/415 (33%), Gaps = 8/415 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L+ ++ G S + A + +
Sbjct: 1 AKMSNSMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVAANNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+++ +++ + ++Q E +LQ Q+ IA + FN +N L+++
Sbjct: 61 GSVSNILLRMRDLANQSANGTNTSDNQAAMQKEFAELQKQITYIADNTQFNDKNLLQSNS 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ ++ S I D + ++ + T
Sbjct: 121 SINIQTLDSSDGNQQIGIDLKSASLKSLGIEELAIGASANPLAKATVEASEAFDKAS--- 177
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
S+ + + + A A+++AA AK
Sbjct: 178 --ADTVAFKTSIDTLAAGPAGAEKDAAVLVKAYIEAAPGGKAAAKTAMDANADAKKLGEQ 235
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
+T K + + + + + T + Y
Sbjct: 236 FDTLEAAENGKKAELTMATAKSTADTTAKGLVDAYNTAKTDAMADPKAKAYLEAKMAYEK 295
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
DT + + D KE + + A VS ID +K
Sbjct: 296 DTSNVANKQKLDSTKEAMEKDPASKDLVVKLDAAKAAATNGTPLGAVSKIDAALKTVADN 355
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ + +K ++ ++ DADMA E + ++ + + +
Sbjct: 356 RATLGATLNRLDFNVNNLKSQSASMASAASQIEDADMAKEMSEMTKFKILNEAGI 410
>gi|87242422|gb|ABD33750.1| flagellin [Bacillus thuringiensis serovar sooncheon]
Length = 417
Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats.
Identities = 57/417 (13%), Positives = 138/417 (33%), Gaps = 5/417 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + +
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ G + K++ E + L+ Q+ I++ + FN + L +
Sbjct: 61 NSVSNILLRMRDIANQSANGTNTGDNQKALDKEFSALKEQIDYISKNTEFNDKKLLNGEN 120
Query: 139 GSSTASI--AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
S + + + L ++ G + +K
Sbjct: 121 TSIAIQTLDSADTAKQININLADSSTSALLIDKLSISGAGAGTALAGVAGGDITAAGNKQ 180
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
+ DA+ T +F + + A T K + A
Sbjct: 181 VALSGLTGAKTTDELDAAVTEFKTEFDKVKSGLSAENADKITAAMDKYTNNKTLDNAKAI 240
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
T + S A + + + T + + + + G +
Sbjct: 241 GDLYKTMAPADSTVVGTAGTKGQSLIDLNATSTGDTAQKRQVAVDAFKDDFDKIKGGLNA 300
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
+ T + + + A + K + + ID ++
Sbjct: 301 QDAAKVTAALDKFNKADGSGNTLENAQEIGKVFKEVAAGSTKSNASDAIKSIDKALETIA 360
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R+ + +K ++ ++ DADMA E + ++ + + +
Sbjct: 361 SNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGI 417
>gi|150395494|ref|YP_001325961.1| flagellin domain-containing protein [Sinorhizobium medicae WSM419]
gi|150027009|gb|ABR59126.1| flagellin domain protein [Sinorhizobium medicae WSM419]
Length = 395
Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats.
Identities = 122/451 (27%), Positives = 188/451 (41%), Gaps = 57/451 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AM+A Q LR I+ N+E Q RVSSGLRV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNVAAMAALQTLRGIDSNMEETQARVSSGLRVGTASDNAAYWSIATTMRSDNMAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG++KVD A AG+ A++V+ I+ K+ A E G D +Q ++
Sbjct: 61 SAVQDALGLGAAKVDTAYAGVENAVEVVKEIRAKLVAATEDGVDKAK-------IQEEIE 113
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + + SIA + S + +
Sbjct: 114 QLKQQLT----------------SIATAASFSGENWLQADITTPVTKSVVGSFVRDSSGV 157
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+LD N + +D + +++ S + A
Sbjct: 158 VSVKTIDYVLDGNSVLFDTVGNTGILDKVYDVSESSVTLSINTGGVVSEHTVAAY----- 212
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + N + + +
Sbjct: 213 -----------------------------TVDDLIAGGAVFQNNYALAGGVSYVQVEGAW 243
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
S+ + + S+ + + +
Sbjct: 244 VRAVASSTVPGQEVAAVTTAAAPITADSWIVDTTAGPAASVPAPASVENIDITDATQAAN 303
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ++ +D ++ +A +GSIS RI +QE+F+ + D+++ G+GRLVDADM EST
Sbjct: 304 LDALIRGVDEALEDLISATSALGSISMRIGMQEEFVSKLTDSIDSGIGRLVDADMNEEST 363
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQTQQQLA+Q+LSI N ++ IL LFR
Sbjct: 364 RLKALQTQQQLAIQSLSIANTNSENILQLFR 394
>gi|151226|gb|AAA63458.1| flagellin [Pseudomonas aeruginosa]
Length = 394
Score = 159 bits (400), Expect = 1e-36, Method: Composition-based stats.
Identities = 54/453 (11%), Positives = 130/453 (28%), Gaps = 64/453 (14%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + + +L R+S+G R++ A D+AA IA + S L+
Sbjct: 3 LTVNTNIASLNTQRNLNNSSASLNTSLQRLSTGSRINSAKDDAAGLQIANRLTSQVNGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S A+ + ++ +++ +++ ++ ++ E QLQ +
Sbjct: 63 VATKNANDGISLAQTAEGALQQSTNILQRMRDLSLQSANGSNSDSERTALNGEAKQLQKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I+ ++F G L G ++ + + + + Y +
Sbjct: 123 LDRISNTTTFGGRKLLDGSFGVASFQVGSAANEIISVGIDEMSAESLNGTYFKADGGGAV 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ + + + + + A +
Sbjct: 183 TAATASGTVDIAIGITGGSAVNVKVDMKGNETAEQAAAKIAAAVNDANVGIGAFSDGDTI 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+K + +A + S + + +
Sbjct: 243 SYVSKAGKDGSGAITSAVSGVVIADTGSTGVGTAAGVAPSATAFA--------------- 287
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ +D +G + + + +
Sbjct: 288 ------------------KTNDTVAKIDISTAKALSRRAGDRTTAIKQIDASVPTSVAVQ 329
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+ ++ + + +AA G RI D A+E
Sbjct: 330 NRFDNTINNLKNIGENVSAARG-------RIEDT---------------------DFAAE 361
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ L+ Q QQ L+ N +LSL R
Sbjct: 362 TANLTKNQVLQQAGTAILAQANQLPQSVLSLLR 394
>gi|220913739|ref|YP_002489048.1| flagellin domain protein [Arthrobacter chlorophenolicus A6]
gi|219860617|gb|ACL40959.1| flagellin domain protein [Arthrobacter chlorophenolicus A6]
Length = 391
Score = 159 bits (400), Expect = 1e-36, Method: Composition-based stats.
Identities = 63/452 (13%), Positives = 127/452 (28%), Gaps = 69/452 (15%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A +A + L + +L +++SSGLR++ A D+AA +I++ +KS G L+
Sbjct: 5 INTNLAANNAYRSLSNTQNDLSKSLEKLSSGLRINRAGDDAAGLAISESLKSQIGGLNVA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G V A+ G+S+A ++ +++ +I++E T L +L
Sbjct: 65 SRNAQDGIGLVQTAEGGLSQAHSILQRLRDLGVQAANDTNNTDSRAAIKTEATSLVEELG 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG L D S + + + + L
Sbjct: 125 RIAGSTDFNGTKLLNGDNASLKIQVGANGDAASQIGVDLSGANVKAIANTLNLGALASGG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ +
Sbjct: 185 SKFDIADATALAGAATFSSTKDG------------------------------------- 207
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + A + + + ++ A + + A +
Sbjct: 208 -------VVTTVTTADLGAAGSFTSVEGYADALRKDADFSSKFTVSVEKDANGAGTGIVV 260
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ N + + + + + A
Sbjct: 261 QAKDGGDLLDADNATAGTGLAAGAATASVATGLDFSNASKAQASITLIDTQIKNVSTARA 320
Query: 361 MEEMVSF-IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+++ ++ A + + +SRI D DMA E
Sbjct: 321 DLGATQNRLESAVQTINVAKENLTASNSRI---------------------RDTDMAEEM 359
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + Q L+ N S+ +L L R
Sbjct: 360 VKFTRNNILSQAGTAMLAQANQSSQGVLQLLR 391
>gi|302669436|ref|YP_003829396.1| flagellin FliC3 [Butyrivibrio proteoclasticus B316]
gi|302393909|gb|ADL32814.1| flagellin FliC3 [Butyrivibrio proteoclasticus B316]
Length = 395
Score = 159 bits (400), Expect = 1e-36, Method: Composition-based stats.
Identities = 63/451 (13%), Positives = 136/451 (30%), Gaps = 61/451 (13%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM A+ L+ + L +R+SSGL++++A DN + ++++ M S L
Sbjct: 3 INYNVSAMIANNALQRNDTLLSESLERLSSGLKIANAKDNPSGLAMSRRMNSQIEGLGVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
D G S V +A +S+ +++ + +D ++IQ E + L+ ++
Sbjct: 63 GDTSNDGISIVQVADGSLSEIQEILQRMNQLAVQASNGTLTNSDREAIQEEASLLKEEIE 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A+ + FNG++ L + G ++ + V
Sbjct: 123 RMAQTTQFNGQSILDGTFDLKGYATIGDTFA-------GSQTDASVKVVNYSDVVEAGVY 175
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
L V+ Q + + S + + A+
Sbjct: 176 KITGIDVSYLHLTGTTGVDKQGIFFENDSDKAIKIERVNDDGTTTSYMNNGMIASVNEDV 235
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+T + + T + S ++ DI + ++
Sbjct: 236 LTLRDSTGKKIDIQIDRSLSDTLFVDLTASGAMTMQVGANEGQTLDIRIPKVNLTTLGIY 295
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ +
Sbjct: 296 NLDMANPEGALEAIEEVKG----------------------------------------- 314
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ I + + ++ SS + + + + R++D DMA E T
Sbjct: 315 ---ALANISSIRSRLGSYQNRLEHTSSSLDITV-------ENMTAAYSRIMDVDMAEEMT 364
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q Q + ++ N +++L L +
Sbjct: 365 VYSTQQVLSQAGISMMAQANERPSQVLQLLQ 395
>gi|115381388|gb|ABI96376.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Indiana]
gi|115381390|gb|ABI96377.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Indiana]
Length = 463
Score = 159 bits (400), Expect = 1e-36, Method: Composition-based stats.
Identities = 59/463 (12%), Positives = 121/463 (26%), Gaps = 54/463 (11%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRITSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAKSVIGSF----------------IRDDNGKVQITTIDYYLDPETVLLDSST 181
+ A V+ T + +
Sbjct: 121 NTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKDTAVTTKAYANNGTTLDVS 180
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ + + ++ F A N D
Sbjct: 181 GLDDAAIKAATGGTNGAPSVTGSAVKFDADNNKYFVTIGGFTGADLDKNGDYEVNVATDG 240
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+A A T +P+V ++ + + +
Sbjct: 241 TVTLAAGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALIAGGVDATDANGAELVKMS 300
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY------ 355
+ G + D + S + T +
Sbjct: 301 YTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTTKTAANQLGGVDGK 360
Query: 356 -----------------------------NEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
E + ID + A +G++
Sbjct: 361 TEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLPKIDAALAQVDALRSDLGAVQ 420
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+R + + + + + R+ D+D A+E + +S Q Q
Sbjct: 421 NRFNSAISNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQ 463
>gi|116563803|gb|ABJ99914.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Rostock]
Length = 450
Score = 159 bits (400), Expect = 1e-36, Method: Composition-based stats.
Identities = 61/450 (13%), Positives = 122/450 (27%), Gaps = 53/450 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTDL-------- 138
++ SIQ EI Q ++ ++ + FNG L D
Sbjct: 61 RVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGA 120
Query: 139 --------------------------GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
G A++ Y +D
Sbjct: 121 NDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDTYAAGADKYRVDI 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + + ++ + N ++ + T T + K +
Sbjct: 181 NSGAVVTDAVAPDKVYVNAANGQLTTDDAENNTAVDLFKTTKSTAGTAEAKAIAGAIKGG 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSG----------------TSGSKSPSVAAS 276
K + + +TT + + + +
Sbjct: 241 KEGDTFDYKGVTFTIDTKTGDDGNGKVSTTINGEKVTLTVADIGIGAADVNAATLQSSKN 300
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + T S N+ V + K
Sbjct: 301 VYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKGESKITVNGAEYTANATGDKITLAGKT 360
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
++ N DA K + ++ ID+ + A +G+I +R +
Sbjct: 361 MFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGAIQNRFDSAITNL 420
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+ R+ DAD A+E + + Q
Sbjct: 421 GNTVTNLNSARSRIEDADYATEVSNMPKAQ 450
>gi|87242454|gb|ABD33766.1| flagellin [Bacillus thuringiensis serovar graciosensis]
Length = 403
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 52/415 (12%), Positives = 128/415 (30%), Gaps = 15/415 (3%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L +D G S + A + +
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAADNTQNGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++Q E +LQ Q+ IA + FN +N L+ D
Sbjct: 61 NSVSNILLRMRDIANQSANGTNTDKNQVALQKEFGELQKQITYIADNTQFNDKNLLKNDQ 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ ++ S I + + + ++ + E + +
Sbjct: 121 TINIQTLDSSDQSKQIGISLKGITLDKLGIDSTAIGADNSAAVNLKEAKTAMAKLATSDE 180
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
+ ++ K + + + A
Sbjct: 181 DSV------------KEDVAAAKVAFEKVKDQFSVNDARAIEDKFIAFSNATTDLTTKAG 228
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
+ + + ++ + +
Sbjct: 229 EINSEFGLKKTTTATNLEDAASKINGLKTANGDDLTALESQVGAAKTALDKVKDFYSKED 288
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ L ++ D + + + K V ID +K
Sbjct: 289 SQKINDLFAKFDKTNKTTGETTAKAIQNAFKDMDIVSTTKADALAAVDKIDEALKMVADN 348
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ + +K + A+ ++ DADMA E + ++ + + +
Sbjct: 349 RATLGATLNRLDFNVNNLKSQQSAMASSASQVEDADMAKEMSEMTKFKILNEAGI 403
>gi|126728916|ref|ZP_01744731.1| flagellin protein [Sagittula stellata E-37]
gi|126710846|gb|EBA09897.1| flagellin protein [Sagittula stellata E-37]
Length = 431
Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats.
Identities = 105/451 (23%), Positives = 177/451 (39%), Gaps = 20/451 (4%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ A++A Q L+ IN + VQ ++S+G +V+ A DNAA W+I++ M+SD
Sbjct: 1 MSSILTNNGAIAALQTLKGINRQMGDVQTQISTGKKVNSARDNAAVWAISKAMESDVAGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
VSD++ LG + + +A+ G D+++ +K K+ A E D IQ++I+ L+ Q+
Sbjct: 61 KKVSDSLSLGLATISVARQGAETVTDLLTQVKEKVVAAQEENVDRDKIQADISALRDQVA 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + FNG+ L ++ + + D ++ +
Sbjct: 121 AVVGAAQFNGQYMLTNTDQTADSGGINVLASIDRSFDGVTSSDIRVNKQDLGTGASSIGA 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + D V+ + + S +
Sbjct: 181 SLTSLTGANNDIAGDGDAAAYVMTGAATAPTGTTTFGSASTDSV---------------- 224
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A + A N + T+ S A ++ +
Sbjct: 225 ----AAGTAFSISITGTAGNGLAATTDRNDISYVARDGDTMADVVAGLAQSFNSYAADDL 280
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T T D+ + D S +
Sbjct: 281 GTDTTVNAVVQNGNEIAFTGHDGTGDNFSLTVNQYDPDASTTIGGRLSALADIDVTTQSG 340
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ++ ID I A +A GS RI Q+DF+ + DA++ G+G LVDADM S
Sbjct: 341 VDSALAGIDALIDTAIDSAAAFGSAEMRIESQKDFVSGLTDALKSGIGTLVDADMEETSA 400
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQ QQQL +QA+SI N++ +L LFR
Sbjct: 401 RLQALQVQQQLGIQAMSIANSAPQSLLGLFR 431
>gi|115381368|gb|ABI96366.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Java]
Length = 463
Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 59/463 (12%), Positives = 122/463 (26%), Gaps = 54/463 (11%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAKSVIGSF----------------IRDDNGKVQITTIDYYLDPETVLLDSST 181
+ A V+ T + +
Sbjct: 121 NTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKDTAVTTKAYANNGTTLDVS 180
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ + + ++ F A + N D
Sbjct: 181 GLDDAAIKAATGGTNGTASVTGGAVKFDADNNKYFVTIGGFTGADAAKNGDYEVNVATDG 240
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+A A T +P+V ++ + + +
Sbjct: 241 TVTLAAGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALIAGGVDATDANGAELVKMS 300
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY------ 355
+ G + D + S + T +
Sbjct: 301 YTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTTKTAANQLGGVDGK 360
Query: 356 -----------------------------NEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
E + ID + A +G++
Sbjct: 361 TEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDALRSDLGAVQ 420
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+R + + + + + R+ D+D A+E + +S Q Q
Sbjct: 421 NRFNFAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQ 463
>gi|87242342|gb|ABD33710.1| flagellin [Bacillus thuringiensis serovar malayensis]
Length = 420
Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 63/420 (15%), Positives = 132/420 (31%), Gaps = 8/420 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + +
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGISLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++Q E +LQ Q+ I+ + FN +N L
Sbjct: 61 NSVSNILLRMRDIANQSANGTNTSDNQAALQKEFGELQKQIDYISGNTQFNDKNLLDGSN 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDY-----YLDPETVLLDSSTDGTERYGLLDRN 193
G+ S S N T + +T L
Sbjct: 121 GTINIQTLDSNDSSKQIGINLTNVSTNSLGIDSLKIGNSKTTQETLDNVTDTINKLNSTG 180
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
+ + T K + K +
Sbjct: 181 ASALDVSNHTTRVADAKEAFEKIQGTLNHADLQKMQQAFKDYDNAKADKKVETAEAIRTT 240
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+ + + + A D A + + + + +
Sbjct: 241 FSEVYGSVEVTKMSQQDYNELRDALTGTATAKDTDHGAKATAAEAAYNKFKSYLTKEQQA 300
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ T + KDL + I+ ++ + I AN D V ID +K
Sbjct: 301 DIGGAISAYKTGPATKDLAQAINGAFTGLATPIAVAANQDETTGSANPLTAVKAIDEALK 360
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ + +K A+ ++ DADMA E + ++ + + +
Sbjct: 361 RIADDRANLGATLNRLDFNVNNLKSQSSAMASAASQIEDADMAKEMSEMTKFKILNEAGI 420
>gi|87242492|gb|ABD33785.1| flagellin [Bacillus weihenstephanensis]
Length = 410
Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 61/415 (14%), Positives = 138/415 (33%), Gaps = 8/415 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L+ ++ G S + A + +
Sbjct: 1 AKMSNSMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVAANNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+++ +++ + ++Q E +LQ Q+ I+ + FN +N L++D
Sbjct: 61 GSVSNILLRMRDLANQSANGTNTSDNQAAVQKEFAELQKQITYISENTQFNDKNLLQSDS 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ ++ S I D + ++ + T
Sbjct: 121 SINIQTLDSSDGNQQIGIDLKSSSLKSLGIDQLAIGASANPLAKATVDASEAFDKATAVT 180
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
+ I + + A + A++ A A A+ T A
Sbjct: 181 KAFTESVIATADT-----GTGADQVSAGLAKAYINALPADKAAAQKAITDAGDTKAEDMI 235
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
+ + K + + + + Y
Sbjct: 236 NKFDALEAAQKGKDAELTLAKAASSQDPKATKLVDAYTQAKTNLDQPAKNYLAAKAVYEA 295
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
DT + + + K I + +++ A + VS ID +K
Sbjct: 296 DTSNAVNKQKLEDTKGIMENTAGSKDLVSKFETAKAAATNGTPLDAVSKIDAALKTVADN 355
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ + +K ++ ++ DADMA E + ++ + + +
Sbjct: 356 RATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGI 410
>gi|17380397|sp|P13119|FLAB2_RHIME RecName: Full=Flagellin B
gi|12057230|gb|AAB81423.2| FlaB [Sinorhizobium meliloti]
Length = 395
Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 165/451 (36%), Positives = 229/451 (50%), Gaps = 56/451 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AM+A Q LR I N+E Q VSSGLRV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNIAAMAALQTLRTIGSNMEETQAHVSSGLRVGQAADNAAYWSIATTMRSDNMAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG++KVD A +GM AI+V+ IK K+ A E G D IQ EI QL+ QL
Sbjct: 61 SAVQDALGLGAAKVDTAYSGMESAIEVVKEIKKKLVAATEDGVDKAKIQEEIDQLKDQLT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ +SF+GENWL+ DL ++ KSV+GSF+RD +G V + +DY L+ +VL D
Sbjct: 121 SISEAASFSGENWLQADLS--GGAVTKSVVGSFVRDASGAVSVKKVDYSLNTNSVLFD-- 176
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T +
Sbjct: 177 ---------------------------------------------TVGNTGILDKVYNVS 191
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
QA TI A+ S S +++ + ++ GNS + V + T+
Sbjct: 192 QASVTLTINTNGVASQHTVAAYSLESLTQAGAEFQGNYALQGGNSYVKVDNVWVRAETAA 251
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G T +A + +S +D + +G S+ +NI
Sbjct: 252 TGATGQELAATTTAAGTITADSWVVDVGNAPAANVSAGQSVAGINIVGMGAAALDALISG 311
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ++ + + A +GSI+ RI LQ DF+ + D+++ GVGRLVDADM EST
Sbjct: 312 VDAALTDMTSA-------AADLGSIAMRIDLQSDFVNKLSDSIDSGVGRLVDADMNEEST 364
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQTQQQLA+Q+LSI N+++ +L+LFR
Sbjct: 365 RLKALQTQQQLAIQSLSIANSASENVLTLFR 395
>gi|152222|gb|AAA26278.1| flagellin B (flaB) [Sinorhizobium meliloti]
Length = 396
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 164/451 (36%), Positives = 224/451 (49%), Gaps = 56/451 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AM+ Q LR I N+E Q VSSGLRV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNTAAMAVLQTLRTIGSNMEETQAHVSSGLRVGQAADNAAYWSIATTMRSDNMAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG +KVD A +GM AI+V+ IK K+ A E G D IQ EI QL+ QL
Sbjct: 61 SAVQDALGLGVAKVDTAYSGMESAIEVVKEIKKKLVAATEDGVDKAKIQEEIDQLKDQLT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ +SF+GENWL+ DL ++ KSV+GSF+RD +G V + +DY L+ +VL D
Sbjct: 121 SISEAASFSGENWLQADLS--GGAVTKSVVGSFVRDASGAVSVKKVDYSLNTNSVLFD-- 176
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T +
Sbjct: 177 ---------------------------------------------TVGNTGILDKVYNVS 191
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
QA TI A+ S S +++ + ++ GNS + V + T+
Sbjct: 192 QASVTLTINTNGVASQHTVAAYSLESLTEAGAEFQGNYALQGGNSYVKVDNVWVRAETAA 251
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G T +A + +S +D + +G S+ +NI
Sbjct: 252 TGATGQELAATTTAAGTITADSWVVDVGNAPAANVSAGQSVAGINIVGMGAVRLDALISG 311
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ++ + + A +GSI+ RI LQ DF+ + D ++KGVGRLVDADM EST
Sbjct: 312 VDAALTDMTSA-------AADLGSIAMRIDLQSDFVNKLMDVIDKGVGRLVDADMNEEST 364
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQTQQQL +Q+LSI N ++ IL LF+
Sbjct: 365 RLKALQTQQQLGIQSLSIANTTSENILRLFQ 395
>gi|116563705|gb|ABJ99865.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Muenchen]
gi|116563819|gb|ABJ99922.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Muenchen]
Length = 451
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 61/451 (13%), Positives = 116/451 (25%), Gaps = 54/451 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANGTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIR--------------DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
I + +D T + T + +
Sbjct: 121 NDGETIDIDLKEISSKTLGLDKLNVQDAYTPKETAVTVDKTTYKNGTDTITAQSNTDIQT 180
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
DI + + D
Sbjct: 181 AIGGGATGVTGADIKFKDGQYYLDVKGGASAGVYKATYDETTKKVNIDTTDKTPLATAEA 240
Query: 253 PAAPAAPNTTSGT-------------------------------------SGSKSPSVAA 275
A T K+ V
Sbjct: 241 TAIRGTATITHNQIAEVTKEGVDTTTVAAQLAAAGVTGADKDNTSLVKLSFEDKNGKVID 300
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
++MG+ K + T + A V T +
Sbjct: 301 GGYAVKMGDDFYAATYDEKTGTITAKTTTYTDGAGVAQTGAVKFGGANGKSEVVTATDGK 360
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
S + + R E + ID + +G++ +R +
Sbjct: 361 TYLASDLDKHNFRTGGELKEVNTDKTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITN 420
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+ + + R+ D+D A+E + +S Q
Sbjct: 421 LGNTVNNLSSARSRIEDSDYATEVSNMSRAQ 451
>gi|115381402|gb|ABI96383.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Agama]
Length = 461
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 57/461 (12%), Positives = 124/461 (26%), Gaps = 54/461 (11%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAKSVIGSF----------------IRDDNGKVQITTIDYYLDPETVLLDSST 181
+ A V+ T + + ++
Sbjct: 121 NTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKDTAVTTRTYADNGTTLDAS 180
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ + + + ++ + A + N D
Sbjct: 181 GLDDTAIKAAIGGTLGTASVTGGTVKFDADNNKYFVTIGGYTGADATKNGDYEVNVATDG 240
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+A A T +P+V ++ + + +
Sbjct: 241 KVTLAPGATKTTIPAGATTKTEVQELKDTPTVVSADAKNALIAGGVDATDANGAELVKMS 300
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY------ 355
+ G + D + S + T +
Sbjct: 301 YTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTTKTAANQLGGVDGK 360
Query: 356 -----------------------------NEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
E + ID + A +G++
Sbjct: 361 TEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLPKIDAALAQVDALRSDLGAVQ 420
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+R + + + + + R+ D+D A+E + +S Q
Sbjct: 421 NRFNSAISNLGNTVNNLFEARSRIEDSDYATEVSHMSRAQI 461
>gi|225375841|ref|ZP_03753062.1| hypothetical protein ROSEINA2194_01473 [Roseburia inulinivorans DSM
16841]
gi|225212276|gb|EEG94630.1| hypothetical protein ROSEINA2194_01473 [Roseburia inulinivorans DSM
16841]
Length = 392
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 63/452 (13%), Positives = 124/452 (27%), Gaps = 64/452 (14%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N AM+A++ L +++SSG R++ AAD+AA +I++ M+ L
Sbjct: 2 VVQHNLQAMNANRMLNVTTGQQAKSTEKLSSGYRINRAADDAAGLTISEKMRKQIKGLDQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
S G S V A+ +++ ++ + D +IQ+EITQL +++
Sbjct: 62 ASTNAQDGVSAVQTAEGALTEVHSMLQRMNELAVQSANGTNAQSDRDAIQAEITQLTTEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FN L+ D ++ D + ++ +T + S
Sbjct: 122 DRVSETTKFNEIYLLKGDSKTTKDVTFYKSGYVTNDDMDLFLEGSTTAIDKKDIADAVAS 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + AN
Sbjct: 182 GKKLYTEAAKAAGQKQADDKLAKKGTDYAYLTKIYDNTGKELSAEEAKKATGDLFANKEH 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
T + + + M + I V+ ++
Sbjct: 242 TVKVKTKTDYLTTNTVNGELSFNLHVGADSEADNKIGVSIETMSSLGIGVKDLKVSTEDD 301
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
++ A + + +
Sbjct: 302 ATVAIDTIAAAIQKVSSQRSALGAVQNRLEHT---------------------------- 333
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ +D ++ TAA +I D DMA E
Sbjct: 334 -----IDNLDNVVENTTAAESRI----------------------------RDTDMAEEM 360
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q L+ N ST +LSL +
Sbjct: 361 VNYSKNNILAQAGQSMLAQANQSTQGVLSLLQ 392
>gi|116563851|gb|ABJ99938.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Naestved]
Length = 450
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 60/450 (13%), Positives = 121/450 (26%), Gaps = 53/450 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTDL-------- 138
++ SIQ EI Q ++ ++ + FNG L D
Sbjct: 61 RVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGA 120
Query: 139 --------------------------GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
G A++ Y +D
Sbjct: 121 NDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDTYAAGADKYRVDI 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + + ++ + N ++ + T + K +
Sbjct: 181 NSGAVVTDAVAPDKVYVNAANGQLTTDDAENNTAVDLFKTTKSAAGTAEAKAIAGAIKGG 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSG----------------TSGSKSPSVAAS 276
K + + +TT + + + +
Sbjct: 241 KEGDTFDYKGVTFTIDTKTGDDGNGKVSTTINGEKVTLTVADIAIGAADVNAATLQSSKN 300
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + T S N+ V + K
Sbjct: 301 VYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKGESKITVNGAEYTANATGDKITLAGKT 360
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
++ N DA K + ++ ID+ + A +G+I +R +
Sbjct: 361 MFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGAIQNRFDSAITNL 420
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+ R+ DAD A+E + + Q
Sbjct: 421 GNTVTNLNSARSRIEDADYATEVSNMPKAQ 450
>gi|294624309|ref|ZP_06703012.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|294665571|ref|ZP_06730852.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
gi|292601391|gb|EFF45425.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|292604669|gb|EFF48039.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
Length = 399
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 65/452 (14%), Positives = 134/452 (29%), Gaps = 59/452 (13%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + ++ R+SSGLR++ A D+AA +I++ + L
Sbjct: 4 VINTNVMSLNAQRNLNTSSASMSTSIQRLSSGLRINSAKDDAAGLAISERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S A+ M + + I+ TD ++ SE+ QL +++
Sbjct: 64 ASRNANDGISLAQTAEGAMVEIGSNLQRIRELSVQSSNATNSSTDRDALNSEVKQLTAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A ++FNG L + + + + + ++ V
Sbjct: 124 DRVANQTNFNGTKLLDGSFSGALFQVGADAGQTIGINSIVDANVDSLGKANFAAAVSGAG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T G + + T + A + T
Sbjct: 184 VTGTATASGSVSGISLSFNDASGSAKSVTIADVKIAAGDTAADVNKKVASAINDKLDQTG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + + + + A + TS ++G+ S + I ++
Sbjct: 244 MYASIKSDGSLQIESLKAGQDFTSLSAGTSSAAGITVGAGITTASA-------------- 289
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ ++LD + L + D +
Sbjct: 290 --------------ASGSTASTLSSLDISTFSGSQKALEIVDKALTAVNSSRADMGAVQN 335
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ + + +A+ +I D D A E+
Sbjct: 336 RFTSTIANLSATSENLSASRSRI----------------------------RDTDYAKET 367
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ L+ + +LSL +
Sbjct: 368 AELTRTQILQQAGTAMLAQAKSVPQNVLSLLQ 399
>gi|115381370|gb|ABI96367.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Indiana]
Length = 463
Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats.
Identities = 59/463 (12%), Positives = 121/463 (26%), Gaps = 54/463 (11%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAKSVIGSF----------------IRDDNGKVQITTIDYYLDPETVLLDSST 181
+ A V+ T + +
Sbjct: 121 NTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKDTAVTTKAYANNGTTLDVS 180
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ + + ++ F A N D
Sbjct: 181 GLDDAAIKAATGGTNGAPSVTGSAVKFDADNNKYFVTIGGFTGADLDKNGDYEVNVATDG 240
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+A A T +P+V ++ + + +
Sbjct: 241 TVTLAAGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALIAGGVDATDANGAELVKMS 300
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY------ 355
+ G + D + S + T +
Sbjct: 301 YTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTTKTAANQLGGVDGK 360
Query: 356 -----------------------------NEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
E + ID + A +G++
Sbjct: 361 TEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDALRFDLGAVQ 420
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+R + + + + + R+ D+D A+E + +S Q Q
Sbjct: 421 NRFNFAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQ 463
>gi|15964423|ref|NP_384776.1| flagellin B protein [Sinorhizobium meliloti 1021]
gi|307311565|ref|ZP_07591206.1| flagellin domain protein [Sinorhizobium meliloti BL225C]
gi|17366440|sp|Q03842|FLAB1_RHIME RecName: Full=Flagellin B
gi|152225|gb|AAA26280.1| flagellin B [Sinorhizobium meliloti]
gi|15073600|emb|CAC45242.1| Flagellin B [Sinorhizobium meliloti 1021]
gi|306899582|gb|EFN30211.1| flagellin domain protein [Sinorhizobium meliloti BL225C]
Length = 394
Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 134/451 (29%), Positives = 183/451 (40%), Gaps = 57/451 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AM+A Q LR I N+E Q VSSGLRV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNIAAMAALQTLRTIGSNMEETQAHVSSGLRVGQAADNAAYWSIATTMRSDNMAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG++KVD A +GM AI+V+ IK K+ A E G D IQ EI QL+ QL
Sbjct: 61 SAVQDALGLGAAKVDTAYSGMESAIEVVKEIKAKLVAATEDGVDKAKIQEEIDQLKDQLT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SF+GENWL+ DL + + V+ + +
Sbjct: 121 SIAEAASFSGENWLQADLSGGPVTKSVVGSFVRDAGGAVSVKKVDYSLNTNSVLFDTAGN 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T ++ + +
Sbjct: 181 TGILDKVYNVSQASVTLPVN---------------------------------------- 200
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
S Y +G +
Sbjct: 201 ----------VNGTTSEYTVGAYNVDDLIDASATFDGDYANVGAGALAGDYVKVQGSWVK 250
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+T +V T + +
Sbjct: 251 AVDVAATGQEVVYDDGTTKWGVDTTVTGAPATNVAAPASIATIDITIAAQAGNLDALIAG 310
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++E ++ + + + A RI LQ DF+ + D+++ GVGRLVDADM EST
Sbjct: 311 VDEALTDMTSAAADLGSIA-------MRIDLQSDFVNKLSDSIDSGVGRLVDADMNEEST 363
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQTQQQLA+Q+LSI N+++ +L+LFR
Sbjct: 364 RLKALQTQQQLAIQSLSIANSASENVLTLFR 394
>gi|307318920|ref|ZP_07598351.1| flagellin domain protein [Sinorhizobium meliloti AK83]
gi|306895334|gb|EFN26089.1| flagellin domain protein [Sinorhizobium meliloti AK83]
Length = 395
Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 165/451 (36%), Positives = 228/451 (50%), Gaps = 56/451 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AM+A Q LR I N+E Q VSSGLRV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNIAAMAALQTLRTIGSNMEETQAHVSSGLRVGQAADNAAYWSIATTMRSDNMAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG++KVD A +GM AI+V+ IK K+ A E G D IQ EI QL+ QL
Sbjct: 61 SAVQDALGLGAAKVDTAYSGMESAIEVVKEIKKKLVAATEDGVDKAKIQEEIDQLKDQLT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ +SF+GENWL+ DL ++ KSV+GSF+RD +G V + +DY L+ +VL D
Sbjct: 121 SISEAASFSGENWLQADLS--GGAVTKSVVGSFVRDASGAVSVKKVDYSLNTNSVLFD-- 176
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T +
Sbjct: 177 ---------------------------------------------TVGNTGILDKVYNVS 191
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
QA TI A+ S S +++ + ++ GNS + V + T+
Sbjct: 192 QASVTLTINTNGVASQHTVAAYSLESLTQAGAEFQGNYALQGGNSYVKVDNVWVRAETAA 251
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G T +A + S +D + +G S+ +NI
Sbjct: 252 TGTTGQELAATTTAAGTITANSWVVDVGNAPATNVSAGQSVAGINIVGMGAAALDALISG 311
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ++ + + A +GSI+ RI LQ DF+ + D+++ GVGRLVDADM EST
Sbjct: 312 VDAALTDMTSA-------AADLGSIAMRIDLQSDFVNKLSDSIDSGVGRLVDADMNEEST 364
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQTQQQLA+Q+LSI N+++ +L+LFR
Sbjct: 365 RLKALQTQQQLAIQSLSIANSASENVLTLFR 395
>gi|170743242|ref|YP_001771897.1| flagellin domain-containing protein [Methylobacterium sp. 4-46]
gi|168197516|gb|ACA19463.1| flagellin domain protein [Methylobacterium sp. 4-46]
Length = 461
Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats.
Identities = 121/461 (26%), Positives = 204/461 (44%), Gaps = 10/461 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTS+LTN +AM+A L+ IN L+ +RVS+G RVS+AADNAAYWSIA +++DN +L
Sbjct: 1 MTSLLTNSAAMTALTTLKSINTQLDTTSNRVSTGQRVSNAADNAAYWSIATTIRTDNSSL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV D++GLG+S VD A G++ + + I+ K+ + G D +Q+EI LQS+++
Sbjct: 61 GAVKDSLGLGASTVDTAYNGLNSILTDLQNIRAKLQTATQAGVDRAKVQTEIAALQSKMK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL------DPET 174
A S +G+NW+ D +S + ++ F R NG + + ++ + D
Sbjct: 121 ATANSSVSSGQNWISVDSSASDYQAIRKIVAGFSRGSNGAINFSYVNVDVGSIKLLDANA 180
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ + D + + A L
Sbjct: 181 GSSVTVAATQAQASGTTSLTGTTAFTGGTADFSAAQTVELTITTETGNATIKLDKAALTT 240
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A + + A A+ TT+G + +A +
Sbjct: 241 AAKDLTKVTTNEFLSALNNAISASTLTTAGVPSVTASLDSAGRLTFTRSATGATNTLKID 300
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT----RHA 350
+ + + G + + +TT D + ++ + + +
Sbjct: 301 TTANNTVDIGFGAASVTGVVNKGTNATTTTGKGLLDTATGTYTAGGGMSGSYSVANFDIS 360
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
N + +++ +D I T A K+G+ +++ Q+ F+ + A +G L
Sbjct: 361 KLVGTNGDTDVANIITMVDQVIGKVTDAGTKLGAAKTQVDGQKTFVDTLMKANSATIGTL 420
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
VD+D+ EST+L ALQTQQQLAVQ+LSI N+S+ +LSLFR
Sbjct: 421 VDSDIEEESTKLKALQTQQQLAVQSLSIANSSSQNLLSLFR 461
>gi|116563799|gb|ABJ99912.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Rissen]
gi|116563849|gb|ABJ99937.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Rissen]
Length = 450
Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats.
Identities = 62/450 (13%), Positives = 122/450 (27%), Gaps = 53/450 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTDL-------- 138
++ SIQ EI Q ++ ++ + FNG L D
Sbjct: 61 RVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGA 120
Query: 139 --------------------------GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
G A++ Y +D
Sbjct: 121 NDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDTYAAGADKYRVDI 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + + + + N ++ + T T + K +
Sbjct: 181 NSGAVVTDAAAPNKVYVNAANGQLTTDDAENNTAVDLFKTTKSTAGTAEAKAIAGAIKGG 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSG----------------TSGSKSPSVAAS 276
K + + +TT + + + +
Sbjct: 241 KEGDTFDYKGVTFTIDTKTGNDGNGKVSTTINGEKVTLTVADITGGAANVDAATLQSSKN 300
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + T S N+ V + K
Sbjct: 301 VFTSVVNGQFTFDDKTKNESAKLSDLEANNAVKGESKITVNGAEYTANATGDKITLAGKT 360
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
++ N DA K + ++ ID+ + A +G+I +R +
Sbjct: 361 MFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGAIQNRFDSAITNL 420
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+ R+ DAD A+E + +S Q
Sbjct: 421 GNTVTNLNSARSRIEDADYATEVSNMSKAQ 450
>gi|32266863|ref|NP_860895.1| flagellin A [Helicobacter hepaticus ATCC 51449]
gi|32267152|ref|NP_861184.1| flagellin A [Helicobacter hepaticus ATCC 51449]
gi|32262915|gb|AAP77961.1| major flagellin subunit FlaA_1 [Helicobacter hepaticus ATCC 51449]
gi|32263205|gb|AAP78250.1| major flagellin subunit FlaA_2 [Helicobacter hepaticus ATCC 51449]
Length = 508
Score = 157 bits (395), Expect = 4e-36, Method: Composition-based stats.
Identities = 76/503 (15%), Positives = 147/503 (29%), Gaps = 56/503 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +A++A + YNL+ +++SSGLR++ AAD+A+ +IA ++S AL
Sbjct: 5 VNTNVNALNAHAQSTFTQYNLKNSMEKLSSGLRINKAADDASGMAIADSLRSQASALGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + IA M + + ++ TIK+K + IQ +I +L L
Sbjct: 65 IRNTNDGMGIIQIADKAMDEQLKILDTIKSKAVQAAQDGQSTQSRSMIQMDIIRLIEGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I +++NG L + + S ++ ++ S
Sbjct: 125 SIGNNTTYNGMALLSGAFTNKEFQVGAYSNQSIKTSIGSTTSDKIGQVRIETGALVTASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N +V + + I+ K + A +
Sbjct: 185 EVTVTFKNVDGVNDITLESVKVSHSAGTGLGVLAEVINKNSDKTGVRAQANAYTTSDESI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
++ +A + V + S + +AT + T
Sbjct: 245 KSGSLANLMVNGVSIGDIIGIQKNDSDGRLVQAFNAATMHTGVEAYTDNLGRLMLRSTDG 304
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID------------------------ 336
G + V V +
Sbjct: 305 RGISLKANGAVPGQGNDVAITTVNGGHDLTTGANNYGRLSLVRTDARDIVVSGLNISSTG 364
Query: 337 --------------------------SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
S + D + ++ + +D
Sbjct: 365 YNDDTKVAQTTTNLRDMKGVFNENVRSASGANYNAVIASGGADLGSGVTSLRGAMISMDI 424
Query: 371 Q---IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+K +GS+S ++ + I + + V+ + + D A+ES+ + L
Sbjct: 425 AESAMKTLDKIRADLGSVSGQMVSTVNNITITQVNVKAAESGIREVDFAAESSEFTKLNI 484
Query: 428 QQQLAVQALSIVNNSTARILSLF 450
Q ALS N IL L
Sbjct: 485 LAQSGSYALSQANAIQQNILRLL 507
>gi|116563801|gb|ABJ99913.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Blegdam]
Length = 450
Score = 157 bits (395), Expect = 4e-36, Method: Composition-based stats.
Identities = 61/450 (13%), Positives = 122/450 (27%), Gaps = 53/450 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTDL-------- 138
++ SIQ EI Q ++ ++ + FNG L D
Sbjct: 61 RVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGA 120
Query: 139 --------------------------GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
G A++ Y +D
Sbjct: 121 NDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDTYAAGADKYRVDI 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + + ++ + N ++ + T T + K +
Sbjct: 181 NSGAVVTDAAAPDKVYVNAANGQLTTDDAENNTAVDLFKTTKSTAGTAEAKAIAGAIKGG 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSG----------------TSGSKSPSVAAS 276
K + + +TT + + + +
Sbjct: 241 KEGDTFDYKGVTFTIDTKTGDGGNGKVSTTINGEKVTLTVADIATGATDVNAATLQSSKN 300
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + T S N+ V + K
Sbjct: 301 VYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKGESKITVNGAEYTANATGDKITLAGKT 360
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
++ N DA K + ++ ID+ + A +G+I +R +
Sbjct: 361 MFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGAIQNRFDSAITNL 420
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+ R+ DAD A+E + + Q
Sbjct: 421 GNTVTNLNSARSRIEDADYATEVSNMPKAQ 450
>gi|116563711|gb|ABJ99868.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Java]
Length = 441
Score = 157 bits (395), Expect = 4e-36, Method: Composition-based stats.
Identities = 59/441 (13%), Positives = 122/441 (27%), Gaps = 44/441 (9%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTHFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP------ 200
I Q +D + + + D +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLSVQDAYTPKGTAVTRDVTTYKDGGTTLTAPTAAEIDT 180
Query: 201 -----------------------------------QVLKDIDVSVYDASGTISTKKFKLA 225
+ A+ + T +
Sbjct: 181 ALGLTGATGTAAVKFKDGNYFVEVTGTTAKNGLYEATVDAAGAVTMTANKSTVTGAGTVT 240
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
A A + A + + K+ V + +++GN
Sbjct: 241 KNQIVDAVTPAPVDTVAAATALTNAGVTGATGNTSLVKMSFEDKNGKVTDAGYALKVGND 300
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
K + T + S V +
Sbjct: 301 YYAADYDEKTGEIKAKTVNYTDATGATKTGAVKFGGANGKTEVVTTVDGNTYQASDVKGH 360
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ + E ++ ID + A +G++ +R + + + + +
Sbjct: 361 NFQSGGALSEAVTTKTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSE 420
Query: 406 GVGRLVDADMASESTRLSALQ 426
R+ D+D A+E + +S Q
Sbjct: 421 ARSRIEDSDYATEVSNMSRAQ 441
>gi|115381382|gb|ABI96373.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Paratyphi C]
Length = 463
Score = 157 bits (395), Expect = 4e-36, Method: Composition-based stats.
Identities = 59/463 (12%), Positives = 122/463 (26%), Gaps = 54/463 (11%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAKSVIGSF----------------IRDDNGKVQITTIDYYLDPETVLLDSST 181
+ A V+ T + +
Sbjct: 121 NTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKDTAVTTKAYANNGTTLDVS 180
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ + + ++ F A + N D
Sbjct: 181 GLDDTAIKAAIGGTTGTAAVTGSAVKFDADNNKYFVTIGGFTGADAAKNGDYEVNVATDG 240
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+A A T +P+V ++ + + +
Sbjct: 241 TVTLAAGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALIAGGVDATDANGAELVKMS 300
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY------ 355
+ G + D + S + T +
Sbjct: 301 YTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTTKTAANQLGGVDGK 360
Query: 356 -----------------------------NEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
E + ID + A +G++
Sbjct: 361 TEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDALRSDLGAVQ 420
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+R + + + + + R+ D+D A+E + +S Q Q
Sbjct: 421 NRFNSAITNLGNTVNNLFEARSRIEDSDYATEVSNMSRAQILQ 463
>gi|116563703|gb|ABJ99864.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Muenchen]
Length = 451
Score = 157 bits (395), Expect = 4e-36, Method: Composition-based stats.
Identities = 61/451 (13%), Positives = 116/451 (25%), Gaps = 54/451 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANGTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIR--------------DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
I + +D T + T + +
Sbjct: 121 NDGETIDIDLKEISSKTLGLDKLNVQDAYTPKETAVTVDKTTYKNGTDTITAQSNTDIQT 180
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
DI + + D
Sbjct: 181 AIGGGATGVTGADIKFKDGQYYLDVKGGASAGVYKATYDETTKKVNIDTTDKTPLATAEA 240
Query: 253 PAAPAAPNTTSGT-------------------------------------SGSKSPSVAA 275
A T K+ V
Sbjct: 241 TAIRGTATITHNQIAEVTKEGVDTTTVAAQLAAAGVTGADKDNTSLVKLSFEDKNGKVID 300
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
++MG+ K + T + A V T +
Sbjct: 301 GGYAVKMGDDFYAATYDEKTGTITAKTTTYTDGAGVAQTGAVKFGGANGKSEVVTATDGK 360
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
S + + R E + ID + +G++ +R +
Sbjct: 361 TYLASDLDKHNFRTGGELKEVNTDKTENPLQKIDAALAQVATLRSDLGAVQNRFNSAITN 420
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+ + + R+ D+D A+E + +S Q
Sbjct: 421 LGNTVNNLSSARSRIEDSDYATEVSNMSRAQ 451
>gi|116563731|gb|ABJ99878.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Typhi]
gi|116563733|gb|ABJ99879.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Typhi]
Length = 451
Score = 157 bits (395), Expect = 4e-36, Method: Composition-based stats.
Identities = 59/451 (13%), Positives = 114/451 (25%), Gaps = 54/451 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANGTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIR--------------DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
I + +D T + + +
Sbjct: 121 NDGETIDIDLKEISSKTLGLDKLNVQDAYTPKETAVTVDKTTYKNGTDPITAQSNTDIQT 180
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
DI + + D
Sbjct: 181 AIGGGATGVTGADIKFKDGQYYLDVKGGASAGVYKATYDETTKKVNIDTTDKTPLATAEA 240
Query: 253 PAAPAAPNTTSGT-------------------------------------SGSKSPSVAA 275
A T K+ V
Sbjct: 241 TAIRGTATITHNQIAEVTKEGVDTTTVAAQLAAAGVTGADKDNTSLVKLSFEDKNGKVID 300
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
++MG+ K + T + V T +
Sbjct: 301 GGYAVKMGDDFYAATYDEKTGAITAKTTTYTDGTGVAQTGAVKFGGANGKSEVVTATDGK 360
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
S + + R E + ID + +G++ +R +
Sbjct: 361 TYLASDLDKHNFRTGGELKEVNTDKTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITN 420
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+ + + R+ D+D A+E + +S Q
Sbjct: 421 LGNTVNNLSSARSRIEDSDYATEVSNMSRAQ 451
>gi|115381366|gb|ABI96365.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Java]
gi|115381378|gb|ABI96371.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Paratyphi B]
gi|115381380|gb|ABI96372.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Paratyphi B]
gi|115381384|gb|ABI96374.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Java]
gi|115381386|gb|ABI96375.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Java]
Length = 463
Score = 157 bits (395), Expect = 5e-36, Method: Composition-based stats.
Identities = 59/463 (12%), Positives = 122/463 (26%), Gaps = 54/463 (11%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAKSVIGSF----------------IRDDNGKVQITTIDYYLDPETVLLDSST 181
+ A V+ T + +
Sbjct: 121 NTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKDTAVTTKAYANNGTTLDVS 180
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ + + ++ F A + N D
Sbjct: 181 GLDDAAIKAATGGTNGTASVTGGAVKFDADNNKYFVTIGGFTGADAAKNGDYEVNVATDG 240
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+A A T +P+V ++ + + +
Sbjct: 241 TVTLAAGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALIAGGVDATDANGAELVKMS 300
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY------ 355
+ G + D + S + T +
Sbjct: 301 YTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTTKTAANQLGGVDGK 360
Query: 356 -----------------------------NEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
E + ID + A +G++
Sbjct: 361 TEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDALRSDLGAVQ 420
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+R + + + + + R+ D+D A+E + +S Q Q
Sbjct: 421 NRFNSAITNLGNTVNNLFEARSRIEDSDYATEVSNMSRAQILQ 463
>gi|116563709|gb|ABJ99867.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Java]
gi|116563721|gb|ABJ99873.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Paratyphi B]
gi|116563723|gb|ABJ99874.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Paratyphi B]
gi|116563727|gb|ABJ99876.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Java]
gi|116563729|gb|ABJ99877.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Java]
Length = 440
Score = 157 bits (395), Expect = 5e-36, Method: Composition-based stats.
Identities = 59/440 (13%), Positives = 121/440 (27%), Gaps = 43/440 (9%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
I Q +D + + + + + D
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLSVQDAYTPKGTAVTRDVTTYKNGGTTLTAPNAAAIDT 180
Query: 207 D----------------------------------------VSVYDASGTISTKKFKLAT 226
A+ T +
Sbjct: 181 ALGTTGAAGTAAVKFKDGNYFVEVTGTTKDGLYEATVDAAGAVTMTANKATVTGASTVTE 240
Query: 227 TSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD 286
A A + A + + K+ V + +++GN
Sbjct: 241 NQIVDAVTPTPVDTVAAATALTNAGVTGATGNTSLVKMSFEDKNGKVTDAGYALKVGNDY 300
Query: 287 IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI 346
K + T + S V +
Sbjct: 301 YAADYDEKTGEIKAKTVNYTDATGATKTGAVKFGGANGKTEVVTTVDGNTYQASDVKGHN 360
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ + E ++ ID + A +G++ +R + + + + +
Sbjct: 361 FQSGGALSEAVTTKTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEA 420
Query: 407 VGRLVDADMASESTRLSALQ 426
R+ D+D A+E + +S Q
Sbjct: 421 RSRIEDSDYATEVSNMSRAQ 440
>gi|87242484|gb|ABD33781.1| flagellin [Bacillus mycoides]
Length = 428
Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats.
Identities = 54/428 (12%), Positives = 133/428 (31%), Gaps = 16/428 (3%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L+ ++ G S + A + M
Sbjct: 1 AKMSTAMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVAANNTQDGMSLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++Q E ++LQ Q+ IA + FN +N L
Sbjct: 61 NSVSNILLRMRDIANQSANGTNTDKNQVALQKEFSELQKQIDYIAGNTQFNDKNLLDGSS 120
Query: 139 GSSTASI----AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
S +D + + + + V + + + L
Sbjct: 121 QVINIQTLDSADGSRQIGIKLNDVSAQALGINNLSIGSDKVSVAAFDKASSAMDALASAG 180
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV---- 250
+V ST K+ + A+ + +
Sbjct: 181 TGDHTTKVDTAKKAFDEIKGSLSSTDLKKVEDAMVKYNSASGDAAKVSAAVDIKTAFDEI 240
Query: 251 -----PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
+ A + + + + + + + D + +
Sbjct: 241 KGNIKVAKISSDALDQAAVSLSDTTNATKVNHSEKYKAAKDAYNSIKGSLTQPQIQAMDL 300
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ A T + + + + + +
Sbjct: 301 AFKAYDEAVEEKTSGTVTKDLDTAKMEAAKGIETAFAGIKANITVANGSDDAAADPLAAI 360
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID +K +G+ +R+ + +K + ++ ++ DADMA E + ++
Sbjct: 361 KTIDAALKKIADDRATLGATLNRLDFNVNNLKSQQSSMASAASQVEDADMAKEMSEMTKF 420
Query: 426 QTQQQLAV 433
+ + +
Sbjct: 421 KILNEAGI 428
>gi|115381376|gb|ABI96370.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Paratyphi A]
Length = 463
Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats.
Identities = 64/463 (13%), Positives = 129/463 (27%), Gaps = 54/463 (11%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQ----------------------------------- 162
+ A I Q
Sbjct: 121 NTLTIQVGANDGETIDIDLKQINFQTLGLDSLNVQKAYDVKDTAVTTKAYADNGTTLDAS 180
Query: 163 --ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
T + T GT ++ + + + + D + +
Sbjct: 181 GLDDAAIKAAIGGTTGTAAVTSGTVKFDADNNKYFVTIGGFTGADAAKNGDYEVNVATDG 240
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
K LAT++ A A + +A A +G + + A
Sbjct: 241 KVTLATSATKTTMPAGAATKTEVQELKDTPAVVSADAKNALIAGGVDTADANAATLVKMS 300
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP-------- 332
+ + + A + ++
Sbjct: 301 YTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTTKTAANQLGGVDGK 360
Query: 333 ------KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
S + + A E + ID + A +G++
Sbjct: 361 TEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDALRSDLGAVQ 420
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+R + + + + + R+ D+D A+E + +S Q Q
Sbjct: 421 NRFNSAITNLGNTVNNLFEARSRIEDSDYATEVSNMSRAQILQ 463
>gi|126728917|ref|ZP_01744732.1| flagellin protein [Sagittula stellata E-37]
gi|126710847|gb|EBA09898.1| flagellin protein [Sagittula stellata E-37]
Length = 438
Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats.
Identities = 111/451 (24%), Positives = 174/451 (38%), Gaps = 19/451 (4%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN AM+A Q L+ +N +L Q +S+G RV+ A DN+A W+I++ M+SD
Sbjct: 7 MSSILTNTGAMTALQTLKMVNRSLTDTQGMISTGKRVATAKDNSAVWAISKAMESDVAGF 66
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+SD++ LG + +D+A+ G +++ +K K+ A E D IQ++I L+ Q+
Sbjct: 67 KRISDSLSLGQATIDVARKGAETVTALLTQVKEKVVASQEENVDRNKIQTDIDALRDQIA 126
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ S FNG+ L + S +V+ S R +G V T I S
Sbjct: 127 AVVGASQFNGQYLLENTE-QTANSGGINVLASIDRSSDGTVASTDIRVNKQDLGTGASSI 185
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + T + +G +
Sbjct: 186 GASLTSLTGANNDIAGDGDAAAFVMTGAATAPTGTTTFGSASTDSVAAGTAFSISITGTA 245
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
AT + A T + S +G
Sbjct: 246 GNGLAATTDRNDISYVARDGDTMADVVAGLAQSFNSYAADDLGTDTTVNAVVQNG----- 300
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T D+ + D S +
Sbjct: 301 -------------NEIAFTGHDGTGDNFSLTVNQYDPDASTTIGGRLSALADVDVTTQSG 347
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ++ ID I A +A GS RI Q +F+ + DA++ G+G LVDADM S
Sbjct: 348 TDSALAAIDGLIDIAIDSAAAFGSAQMRIETQSNFVSGLTDALKSGIGTLVDADMEETSA 407
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQ QQQL++QA+SI N + +LSLFR
Sbjct: 408 RLQALQVQQQLSIQAMSIANQAPQSLLSLFR 438
>gi|116563757|gb|ABJ99891.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Stanley]
Length = 451
Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats.
Identities = 60/451 (13%), Positives = 115/451 (25%), Gaps = 54/451 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANGTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIR--------------DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
I + +D T + T + +
Sbjct: 121 NDGETIDIDLKEISSKTLGLDKLNVQDAYTPKETAVTVDKTTYKNGTDTITAQSNTDIQT 180
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
DI + + D
Sbjct: 181 AIGGGATGVTGADIKFKDGQYYLDVKGGASAGVYKATYDETTKKVNIDTTDKTPLATAEA 240
Query: 253 PAAPAAPNTTSGT-------------------------------------SGSKSPSVAA 275
A T K+ V
Sbjct: 241 TAIRGTATITHNQIAEVTKEGVDTTTVAAQLAAAGVTGADKDNTSLVKLSFEDKNGKVID 300
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
++MG+ K + T + V T +
Sbjct: 301 GGYAVKMGDDFYAATYDEKTGAITAKTTTYTDGTGVAQTGAVKFGGANGKSEVVTATDGK 360
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
S + + R E + ID + +G++ +R +
Sbjct: 361 TYLASDLDKHNFRTGGELKEVNTDKTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITN 420
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+ + + R+ D+D A+E + +S Q
Sbjct: 421 LGNTVNNLSSARSRIEDSDYATEVSNMSRAQ 451
>gi|116563735|gb|ABJ99880.1| phase 1 flagellin [Salmonella enterica subsp. diarizonae]
gi|116563737|gb|ABJ99881.1| phase 1 flagellin [Salmonella enterica subsp. diarizonae]
Length = 440
Score = 156 bits (393), Expect = 6e-36, Method: Composition-based stats.
Identities = 56/440 (12%), Positives = 117/440 (26%), Gaps = 43/440 (9%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
I Q +D + +DS + +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDALNVQKAYDVDSKPAQSIKLDTSALTATAIKNGVTGAST 180
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKA-------------------------------- 234
D ++ D + + + +
Sbjct: 181 DGALKDGKVYSNGTDYYVEVSFADATDTAKGGFLKVDVDSATGAVTVPGTAATAAATKPA 240
Query: 235 --------ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD 286
+ A + + +
Sbjct: 241 GVKEVTEVQGKIPASTAIQDQLKAGGVTTADAATAEVVKMSYTDKNGKTIDGGYAVKVGN 300
Query: 287 IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI 346
+ AT K + T+ T + + S +
Sbjct: 301 DYYAATQKKDGSFSVNTTSYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHN 360
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ A E + ID + +G++ +R + + + +
Sbjct: 361 FKAQPDLAEAATTTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSA 420
Query: 407 VGRLVDADMASESTRLSALQ 426
R+ D+D A+E + +S Q
Sbjct: 421 RSRIEDSDYATEVSNMSRAQ 440
>gi|115381400|gb|ABI96382.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Agama]
Length = 461
Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats.
Identities = 64/461 (13%), Positives = 128/461 (27%), Gaps = 54/461 (11%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQ----------------------------------- 162
+ A I Q
Sbjct: 121 NTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKDTAVTTRTYADNGTTLDVS 180
Query: 163 --ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
T + T GT ++ + + + + D + +
Sbjct: 181 GLDDAAIKAAIGGTTGTPAVTGGTVKFDADNNKYFVSIGGYTGADASKNGDYEVNVAADG 240
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
K LAT + A AT + +A A +G + + A
Sbjct: 241 KVTLATGATKTTIPAGATTKTEVQELKDTPTVVSADAKNALIAGGVDATDANGAELVKMS 300
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP-------- 332
+ + + A + ++
Sbjct: 301 YTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGATKTAANQLGGVDGK 360
Query: 333 ------KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
S + + A E + ID + A +G++
Sbjct: 361 TEVVTIDGKTYNASKAAGHDFQAQPELAEAAAKTTENPLPKIDAALAQVDALRSDLGAVQ 420
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+R + + + + + R+ D+D A+E + +S Q
Sbjct: 421 NRFNSAISNLGNTVNNLFEARSRIEDSDYATEVSHMSRAQI 461
>gi|116563699|gb|ABJ99862.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Zanzibar]
gi|116563701|gb|ABJ99863.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Zanzibar]
Length = 440
Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats.
Identities = 59/440 (13%), Positives = 121/440 (27%), Gaps = 43/440 (9%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
I Q +D + + ++ + + +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKAYDVQATVENSVKLDTSALTADAIKGGVTGATT 180
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
++ D + + + + + F + T A AA + +
Sbjct: 181 AGALKDGKVYSNGTDYYVEVSFADATDSGKNGFLKVDVNTTTGAVTVPAAAANTVAAKPA 240
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
G + D A + + + D
Sbjct: 241 GVSEVTEVQGLNTPSSAVQDQLTAAGVSAADAAKSEVVKMSYTDKNGKTIDGGFGVKVGD 300
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAY------------------------------- 355
K D S+ T
Sbjct: 301 DIYAATKNKDGSISINATEYTDKDGNTKTALNQLGGVDGKTEVVTIDGKTYNASKAAGHD 360
Query: 356 ---------NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
E + ID + A +G++ +R + + + +
Sbjct: 361 FKAQPELAEAAATTTENPLQKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSSA 420
Query: 407 VGRLVDADMASESTRLSALQ 426
R+ D+D A+E + +S Q
Sbjct: 421 RSRIEDSDYATEVSNMSRAQ 440
>gi|115381372|gb|ABI96368.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Indiana]
Length = 463
Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats.
Identities = 59/463 (12%), Positives = 121/463 (26%), Gaps = 54/463 (11%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAKSVIGSF----------------IRDDNGKVQITTIDYYLDPETVLLDSST 181
+ A V+ T + +
Sbjct: 121 NTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKDTAVTTKAYANNGTTLDVS 180
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ + + ++ F A N D
Sbjct: 181 GLDDAAIKAATGGTNGAPSVTGSAVKFDADNNKYFVTIGGFTGADLDKNGDYEVNVATDG 240
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+A A T +P+V ++ + + +
Sbjct: 241 TVTLAAGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALIAGGVDATDANGAELVKMS 300
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY------ 355
+ G + D + S + T +
Sbjct: 301 YTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTTKTAANQLGGVDGK 360
Query: 356 -----------------------------NEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
E + ID + A +G++
Sbjct: 361 TEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDALRFDLGAVQ 420
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+R + + + + + R+ D+D A+E + +S Q Q
Sbjct: 421 NRFNFAITNLGNTVNNLFEARSRIEDSDYATEVSNMSRAQILQ 463
>gi|294992411|gb|ADF57343.1| flagellin protein FlaA [Roseburia inulinivorans DSM 16841]
Length = 392
Score = 156 bits (392), Expect = 9e-36, Method: Composition-based stats.
Identities = 63/452 (13%), Positives = 123/452 (27%), Gaps = 64/452 (14%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N AM+A++ L +++SSG R++ AAD+AA +I++ M+ L
Sbjct: 2 VVQHNLQAMNANRMLNVTTGQQAKSTEKLSSGYRINRAADDAAGLTISEKMRKQIKGLDQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
S G S V A+ ++ ++ + D +IQ+EITQL +++
Sbjct: 62 ASTNAQDGVSAVQTAEGALTVVHSMLQRMNELAVQSANGTNAQSDRDAIQAEITQLTTEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FN L+ D ++ D + ++ +T + S
Sbjct: 122 DRVSETTKFNEIYLLKGDSKTTKDVTFYKSGYVTNVDMDLFLEGSTTAIDKKDIADAVAS 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + AN
Sbjct: 182 GKKLYTEAAKAAGQKQADDKLAKKGTDYAYLTKIYDNTGKELSAEEAKKATGDLFANKEH 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
T + + + M + I V+ ++
Sbjct: 242 TVKVKTKTDYLTTNTVNGELSFNLHVGADSEADNKIGVSIETMSSLGIGVKDLKVSTEDD 301
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
++ A + + +
Sbjct: 302 ATVAIDTIAAAIQKVSSQRSALGAVQNRLEHT---------------------------- 333
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ +D ++ TAA +I D DMA E
Sbjct: 334 -----IDNLDNVVENTTAAESRI----------------------------RDTDMAEEM 360
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q L+ N ST +LSL +
Sbjct: 361 VNYSKNNILAQAGQSMLAQANQSTQGVLSLLQ 392
>gi|116563715|gb|ABJ99870.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Indiana]
gi|116563787|gb|ABJ99906.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Indiana]
gi|116563789|gb|ABJ99907.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Indiana]
Length = 444
Score = 156 bits (392), Expect = 9e-36, Method: Composition-based stats.
Identities = 63/444 (14%), Positives = 116/444 (26%), Gaps = 47/444 (10%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
I Q +D + +DS ++ V
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKAYDVDSKAVTGVSTLDTTGLTGANIKTGVDGAT 180
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
S G + A T + A T
Sbjct: 181 TTSGSIKDGKVYYDGATKNYYVEVDFSDAADTAKNGYYKVNVADDGTVTMGASTTKEPAK 240
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ V + + S A T + + T V +
Sbjct: 241 PAGVVEVTKTQEEKAIKASAEVKAALTAGGVDAADAATAEMVKMSYTDKNGKTIDGGYAV 300
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNE----------------------------- 357
D T N
Sbjct: 301 KVGDSYYAATQKKDGSFSVNTTSYTDKDGNTKSALNQLGGVDGKTEVVTIDGKTYNASKA 360
Query: 358 ---------------KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
E + ID + A +G++ +R + + +
Sbjct: 361 AGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVNN 420
Query: 403 VEKGVGRLVDADMASESTRLSALQ 426
+ + R+ D+D A+E + +S Q
Sbjct: 421 LSEARSRIEDSDYATEVSNMSRAQ 444
>gi|87242414|gb|ABD33746.1| flagellin [Bacillus thuringiensis serovar cameroun]
Length = 424
Score = 156 bits (392), Expect = 9e-36, Method: Composition-based stats.
Identities = 49/424 (11%), Positives = 128/424 (30%), Gaps = 12/424 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGISLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++ E L+ Q+ I++ + FN + L
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTDKNQGALDKEFAALKEQIDYISKNTEFNDKKLLDGSN 120
Query: 139 GSSTASI---------AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGL 189
+ + + ++ L +
Sbjct: 121 KAISIQTLDSEDKGKQIDISLSDSSTAALKINSLSIAANGLGIGSGQELVGVASNTIADT 180
Query: 190 LDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIP 249
+ + DA +T+ L A +
Sbjct: 181 VADDLTNLTGTGTSGATPQERTDAVALFTTQYKNLKAAMNAKDVETIDAAIKKFEGENNL 240
Query: 250 VPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
A A + + + + + + K ++ S +
Sbjct: 241 ENAKAIGTAFKGAAKATLTTDITAVKGFATALSDLTTTSTPDSRKAAMQSFVTSFDKVKG 300
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ ++ +++ S+ D + T + + ID
Sbjct: 301 SMNSSDVAKISDAIDRFSKTDDSGNTLEAARAIGDAFTAATTNGKTSTATDANSAIKAID 360
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
++ + +G+ +R+ + +K ++ ++ DADMA E + ++ +
Sbjct: 361 EALETIASNRATLGATLNRLDFNVNNLKNQASSMASAASQVEDADMAKEMSEMTKFKILN 420
Query: 430 QLAV 433
+ +
Sbjct: 421 EAGI 424
>gi|116563753|gb|ABJ99889.1| phase 1 flagellin [Salmonella enterica subsp. diarizonae]
Length = 440
Score = 156 bits (392), Expect = 1e-35, Method: Composition-based stats.
Identities = 55/440 (12%), Positives = 116/440 (26%), Gaps = 43/440 (9%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
I Q +D + + S + +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDALNVQKAYDVHSKPAQSIKLDTSALTATAIKNGVTGAST 180
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKA-------------------------------- 234
D ++ D + + + +
Sbjct: 181 DGALKDGKVYSNGTDYYVEVSFADATDTAKGGFLKVDVDSATGAVTVPGTAATAAATKPA 240
Query: 235 --------ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD 286
+ A + + +
Sbjct: 241 GVKEVTEVQGKIPASTAIQDQLKAGGVTTADAATAEVVKMSYTDKNGKTIDGGYAVKVGN 300
Query: 287 IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI 346
+ AT K + T+ T + + S +
Sbjct: 301 DYYAATQKKDGSFSVNTTSYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHN 360
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ A E + ID + +G++ +R + + + +
Sbjct: 361 FKAQPDLAEAATTTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSA 420
Query: 407 VGRLVDADMASESTRLSALQ 426
R+ D+D A+E + +S Q
Sbjct: 421 RSRIEDSDYATEVSNMSRAQ 440
>gi|116563717|gb|ABJ99871.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Paratyphi A]
gi|116563719|gb|ABJ99872.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Paratyphi A]
Length = 440
Score = 156 bits (392), Expect = 1e-35, Method: Composition-based stats.
Identities = 60/440 (13%), Positives = 120/440 (27%), Gaps = 43/440 (9%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQI----------------------------------------TTI 166
I Q +T
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKKYDVKSEAVTPSATLSTTALDGAGLKTGTGSTT 180
Query: 167 DYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
D + + +ST + + + ++V+ A + + T
Sbjct: 181 DTGSIKDGKVYYNSTSKNYYVEVEFTDATDQTNKGGFYKVNVADDGAVTMTAATTKEATT 240
Query: 227 TSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD 286
+G A + A + +
Sbjct: 241 PTGITEVTQVQKPVAAPAAIQAQLTAAHVTGADTAEMVKMSYTDKNGKTIDGGFGVKVGA 300
Query: 287 IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI 346
AT + T T + S +
Sbjct: 301 DIYAATKNKDGSFSINTTEYTDKDGNTKTALNQLGGADGKTEVVSIDGKTYNASKAAGHN 360
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ A E ++ ID + A +G++ +R + + + +
Sbjct: 361 FKAQPELAEAAAATTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSSA 420
Query: 407 VGRLVDADMASESTRLSALQ 426
R+ D+D A+E + +S Q
Sbjct: 421 RSRIEDSDYATEVSNMSRAQ 440
>gi|254559262|ref|YP_003066357.1| flagellin [Methylobacterium extorquens DM4]
gi|254266540|emb|CAX22304.1| putative flagellin (flaA-like; flaB-like) [Methylobacterium
extorquens DM4]
Length = 465
Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats.
Identities = 125/465 (26%), Positives = 212/465 (45%), Gaps = 14/465 (3%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTS+LTN +AM+A L+ IN L++ +RVS+G RVS AADNAAYWSIA +++DN +L
Sbjct: 1 MTSLLTNTAAMTALTTLKGINQQLDMTSNRVSTGQRVSSAADNAAYWSIATTVRTDNASL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV D++GLG+S VD A G++ + + ++ K+ + G D +Q EI LQ++++
Sbjct: 61 SAVKDSLGLGASAVDTAYNGLTSVLGDLQNLRTKLQTALTPGVDRSKVQVEIAALQNKMK 120
Query: 121 DIARGSSFNGENWLRTDL--GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP------ 172
A S +G+NWL D ++ ++V+ F R+ G V +TI ++
Sbjct: 121 STADSSISSGQNWLSVDSSASNTAFQGTQNVVAGFSRNTAGTVTFSTIGIDVNAIKLYDL 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + + + G + + + T+ + +
Sbjct: 181 NSSTISTPATAGQIVGTTALTGTTVFAGGTANFSAANEVNFALTLGNGDTANIVINKTTM 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT 292
+A A + I A TT K+ ++ + + T
Sbjct: 241 ASAAADLTKVTTQEFIDAINNQIAADTATTPLVGDVKASLDSSGRLTFTTTATGAAAQIT 300
Query: 293 TKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANT 352
+N+ S G + VG ++ V + + +T
Sbjct: 301 IQNNTASTGGTPAFALVDVGFGTGTTAADARVGKGSAAGTTAGRGILDTVDGSTSYAIST 360
Query: 353 DAYNE------KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ ++ +++ ++ + T A K+G+ ++I Q+ FI + A ++
Sbjct: 361 IDISTLSGTAGDTTLKNIITQVEKALAKVTDAGTKLGASKTQIDGQKSFIDTLMKANDRT 420
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+G LVDAD+ EST+L ALQTQQQLAVQ LSI N++T +LSLFR
Sbjct: 421 IGTLVDADIEEESTKLKALQTQQQLAVQTLSIANSATQTVLSLFR 465
>gi|115381374|gb|ABI96369.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Paratyphi A]
Length = 463
Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats.
Identities = 71/463 (15%), Positives = 133/463 (28%), Gaps = 54/463 (11%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAKS----------------------------------------VIGSFIRDD 157
+ A G+ +
Sbjct: 121 NTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKDTAVTTKAYADNGTTLDAS 180
Query: 158 NGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI 217
T + S T + + +
Sbjct: 181 GLDDAAIKAAIGGTTGTAAVTSGTVKFDADNNKYFVTIGGFTGADAAKNGDYEVNVATDG 240
Query: 218 STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASA 277
AT + AA T Q V A A T+ + + ++ +
Sbjct: 241 KVTLATSATKTTMPAGAATKTEVQELKDTPAVVSADAKNALIAGGVDTADANAATLVKMS 300
Query: 278 TYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
+ G + A Y +T A T Y + TT + L
Sbjct: 301 YTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTTKTAANQLGGVDGK 360
Query: 338 GYSMVTLNITRHANTD-----------AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ T +A+ A E + ID + A +G++
Sbjct: 361 TEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDALRSDLGAVQ 420
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+R + + + + + R+ D+D A+E + +S Q Q
Sbjct: 421 NRFNSAITNLGNTVNNLFEARSRIEDSDYATEVSNMSRAQILQ 463
>gi|116563713|gb|ABJ99869.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Indiana]
Length = 444
Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats.
Identities = 63/444 (14%), Positives = 118/444 (26%), Gaps = 47/444 (10%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
I Q +D + +DS ++ V
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKAYDVDSKAVTGVSTLDTTGLTGANIKTGVDGAT 180
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT----- 261
S G + AA T + A T
Sbjct: 181 TTSGSIKDGKVYYDGATKNYYVEVDFSAAADTAKNGYYKVNVADDGTVTMGASTTKEPAK 240
Query: 262 ---------------------------------------TSGTSGSKSPSVAASATYIRM 282
+ +
Sbjct: 241 PAGVVEVTKTQEEKAIKASAEVKAALTAGGVDAADAATAEMVKMSYTDKNGKTIDGGYAV 300
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
D + AT K + T+ T + S
Sbjct: 301 KVGDSYYAATQKKDGSFSVNTTSYTDKDGNTKSALNQLGGVDGKTEVVTIDGKTYNASKA 360
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + A E + ID + A +G++ +R + + +
Sbjct: 361 AGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVNN 420
Query: 403 VEKGVGRLVDADMASESTRLSALQ 426
+ + R+ D+D A+E + +S Q
Sbjct: 421 LSEARSRIEDSDYATEVSNMSRAQ 444
>gi|144900950|emb|CAM77814.1| predicted flagellin protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 405
Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats.
Identities = 66/454 (14%), Positives = 148/454 (32%), Gaps = 53/454 (11%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +A SA + L + +++SG R++ A+D+AA +I ++SD L
Sbjct: 1 MAVIATNTAANSALRYLNLNSEAQSSSLSKLASGSRITKASDDAAGLAIGTRIQSDVTVL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
S + ++ + A G+++ D++ +K+ T ++ I +E +L
Sbjct: 61 SQAATNASQATAILQTADGGLARISDILQRMKSLATQSDSGSVTDSERTYIDAEYQELLD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA + +NG + L ++AS + + + +
Sbjct: 121 EVDGIAESTRYNGVSLLDGTGQYASASTNA-------TVSSNWMTDSQYADITTVAAADV 173
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
T + + DV+ +G +T + T +
Sbjct: 174 FRITTSDGNFVDYTIADDYDGTAGSVSLEDVAASINAGDTTTPEAANVTATIETDNDGRK 233
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
T + G + ++
Sbjct: 234 RLVLTGIDGTTITAMDDTTGTALEGLGMLAADGSTI------------------------ 269
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+++ + + + + +
Sbjct: 270 -------------------VGGSKTGVDFMVGTSSTDTINLSIDNVGTTALGLASSSVST 310
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ + ++ +D+ I A ++G+ SR + + I + ++ ++DAD+A+
Sbjct: 311 QANAQTALTALDSAIDAVIQARAEVGATMSRFEFRSETIDTTSENLQSAQSAIMDADVAA 370
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + LS+ + Q A+ ALS N +LSL +
Sbjct: 371 EKSTLSSADVKTQAAIAALSQANQMPQNLLSLLK 404
>gi|51246545|ref|YP_066429.1| flagellin (FliC) [Desulfotalea psychrophila LSv54]
gi|50877582|emb|CAG37422.1| probable flagellin (FliC) [Desulfotalea psychrophila LSv54]
Length = 857
Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats.
Identities = 46/291 (15%), Positives = 97/291 (33%), Gaps = 3/291 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I TN +++A + L +L R+SSGLR++ A D+AA +I+ M + L+
Sbjct: 3 LTINTNIGSLNAQRNLGISQRDLATSMQRLSSGLRINSAKDDAAGLAISDRMTAQVRGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
S G S A+ + ++ +++ I+ +D S+ SE+ QL+ +
Sbjct: 63 QASRNANDGISMAQTAEGALQESTNILQRIRELAVQSANDTNTNSDRASLNSEVQQLKEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA + FNG + + +T + + + +T
Sbjct: 123 LNRIASTTEFNGRKVIDGTMKDATFQVGPNAGKEESISFSVASSLTKDLSQDGVAIKAPG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ V + + + A+ + + A + +
Sbjct: 183 GRPVQGVSLSGSIPAGSLVVNGKEVGAATNNSELAAAIHTADEAVTARPINHQQFEFSKS 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
+ K + V + A T +G + + +
Sbjct: 243 QLEVKDDFPLTVNIDNATPVTATNFTINGVDPTKTVDTNDAKVLATAINAQ 293
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 46/121 (38%)
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ N T + A ++ +D I A G +G++ +R
Sbjct: 737 GDSLGLAGLTGLGNSTISIDQINVLTSEASIIAMASVDEAIMDIDAIRGGLGAVQNRFTS 796
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + + R++D D+A E++ ++ QQ V L+ N + LSL +
Sbjct: 797 TISNLSNVSENLSAARSRILDTDIAMETSAMTKNNILQQAGVSILTQANQTPQLALSLLK 856
Query: 452 G 452
G
Sbjct: 857 G 857
>gi|116563855|gb|ABJ99940.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Coeln]
Length = 451
Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats.
Identities = 56/451 (12%), Positives = 113/451 (25%), Gaps = 54/451 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSF---------------------------------------------------IR 155
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKKYDVDNTVVTNPNYVDGAALSTTMPTAAEIKTA 180
Query: 156 DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASG 215
G + + + + + I
Sbjct: 181 IGTGAGTPAVKGNEVQFDKMTGKYYVEIEGYSAPDAAKNGIYEAKVADDGTISLETGTKK 240
Query: 216 TISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAA 275
+ + K D + A + A A S +
Sbjct: 241 IGTAMPAGAEVITHVQKKDQPVVVDASVKDALKAGGVDDAVADTAQLVKMSYTDKNGKTI 300
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
Y + + + T+ T A +
Sbjct: 301 EGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTTKTAANQLGGVDGKTEVVTIDGK 360
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
S + + A E ++ ID + A +G++ +R +
Sbjct: 361 TYNASKAEGHNFKAQPDLAEAAAKTTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITN 420
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+ + + R+ D+D A+E + +S Q
Sbjct: 421 LGNTVNNLSSARSRIEDSDYATEVSNMSRAQ 451
>gi|51245513|ref|YP_065397.1| flagellin [Desulfotalea psychrophila LSv54]
gi|50876550|emb|CAG36390.1| related to flagellin [Desulfotalea psychrophila LSv54]
Length = 1128
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 82/205 (40%), Gaps = 3/205 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN ++++A + L +L +R+SSGLR++ A D+AA +I+ M S L+
Sbjct: 3 LSINTNVASLNAQRNLNKSQGSLGTSMERLSSGLRINSAKDDAAGLAISDRMTSQVRGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
+ G S A+ + ++ +++ I+ G+D S+ E+ QL+S+
Sbjct: 63 QATRNANDGISMAQTAEGALQESTNILQRIRELAVQSSNDTNTGSDRASLNDEVQQLKSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA + FNG+ L L +T + + + + +
Sbjct: 123 LDRIADTTEFNGKKVLDGTLQDATFQVGSNAGKNQTISFSIESSKGADLSQDGRSLDAPA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVL 203
+ I+V +
Sbjct: 183 GNGITGSTMTGSVAAGTIQVNGNDV 207
Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats.
Identities = 38/357 (10%), Positives = 88/357 (24%)
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
T S + Q+ + I + + T +I + G
Sbjct: 772 TTLDAGDDAVSTDDDTHSVTSQNVIAAINKNADGFSAIAELDKDDKETGNIIITKAGGSN 831
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
N + + D L I K +
Sbjct: 832 FTLNEDIDSKEAAANKIGLADTVADGRDLRGTVSLESDTSIIIAGDDPSKAGLEAGRVDP 891
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
G + L G K ++ + + V A T ++
Sbjct: 892 GVVGDYNLTLTGDDGTEFKVDMSSAKRDGHVTAEDVATAINSDAATTAKFSAKVDEDGQL 951
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + ++ + E +
Sbjct: 952 QVSRNDGSSFKITEMVDKDGDTKDDGVITDGLVGVDNAAKKFVGQVEIDSPVDVTLTGSG 1011
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ N + + + + ++ +D + GK+G++ +R
Sbjct: 1012 LKEAGLNNIGNGSTTIDKLDILTRDSANTAITSVDEALMDIDQMRGKLGAVQNRFTSTIS 1071
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + + R++D D+A E++ ++ QQ V L+ + LSL +
Sbjct: 1072 NLNNVSENLSAARSRILDTDIAKETSEMTKQNILQQAGVSILAQAKQAPQMALSLIK 1128
>gi|3098297|gb|AAC63946.1| flagellin [Pseudomonas aeruginosa]
Length = 390
Score = 155 bits (390), Expect = 2e-35, Method: Composition-based stats.
Identities = 59/446 (13%), Positives = 119/446 (26%), Gaps = 58/446 (13%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + + +L R+S+G R++ A D+AA IA + S L+
Sbjct: 3 LTVNTNIASLNTQRNLNNSSASLNTSLQRLSTGSRINSAKDDAAGLQIANRLTSQVNGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
A Q+ LQ
Sbjct: 63 ----------------------------------VATKNANDGISLAQTAEGALQQSTNI 88
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ R + ++ ++ S ++ V D T L + + S
Sbjct: 89 LQRMRDLSLQSANGSNSDSERTALNGEVKQLQKELDRISNTTTFGGRKLLDGSFGVASFQ 148
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
G+ ++ + + + T +T
Sbjct: 149 VGSAANEIISVGIDEMSAESLNGTYFKADGGGAVTAATASGT------------------ 190
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + + + + A+A N + T
Sbjct: 191 ------VDIAIGITGGSAVNVKVDMKGNETAEQAAAKIAAAVNDANVGIGAFSDGDTISY 244
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
T S + + +
Sbjct: 245 VSKAGKDGSGAITSAVSGVVIADTGSTGVGTAAGVTPSATAFAKTNDTVAKIDISTAKGA 304
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ V ID IK A +G++ +R + +K + + V GR+ D D A+E+
Sbjct: 305 QSAVLVIDEAIKQIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDFAAETAN 364
Query: 422 LSALQTQQQLAVQALSIVNNSTARIL 447
L+ Q QQ L+ N +L
Sbjct: 365 LTKNQVLQQAGTAILAQANQLPQSVL 390
>gi|116563707|gb|ABJ99866.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Coeln]
gi|116563785|gb|ABJ99905.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Moscow]
gi|116563865|gb|ABJ99945.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Coeln]
Length = 451
Score = 155 bits (390), Expect = 2e-35, Method: Composition-based stats.
Identities = 63/451 (13%), Positives = 123/451 (27%), Gaps = 54/451 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE------- 199
I Q +D + +D++ Y
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKKYDVDNTVVTNPNYVDGAALSTTMPTAAEIKTA 180
Query: 200 -PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
V + ST K+ + + AA +AK + L
Sbjct: 181 IGTGAGTPAVKGNEVQFDKSTGKYYVEIEGYSAPDAAKNGIYEAKVADDGTISLETGTKK 240
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
T V + + S ++ +
Sbjct: 241 IGTAMPAGAEVITHVQKKDQPVVVDASVKDALKAGGVDDAVADTAQLVKMSYTDKNGKTI 300
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN---------------------- 356
+ K + D + T + D
Sbjct: 301 EGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTTKTAANQLGGVDGKTEVVTIDGK 360
Query: 357 ---------------------EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
E ++ ID + A +G++ +R +
Sbjct: 361 TYNASKAEGHNFKAQPDLAEAAAKTTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITN 420
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+ + + R+ D+D A+E + +S Q
Sbjct: 421 LGNTVNNLSSARSRIEDSDYATEVSNMSRAQ 451
>gi|116563783|gb|ABJ99904.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Fischerkietz]
Length = 451
Score = 155 bits (390), Expect = 2e-35, Method: Composition-based stats.
Identities = 63/451 (13%), Positives = 123/451 (27%), Gaps = 54/451 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE------- 199
I Q +D + +D++ Y
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKKYDVDNTAVTNPNYVDGAALSTTMPTAAEIKTA 180
Query: 200 -PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
V + ST K+ + + AA +AK + L
Sbjct: 181 IGTGAGTPAVKGNEVQFDKSTGKYYVEIEGYSAPDAAKNGIYEAKVADDGTISLETGTKK 240
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
T V + + S ++ +
Sbjct: 241 IGTAMPAGAEVITHVQKKDQPVVVDASVKDALKAGGVDDAVADTAQLVKMSYTDKNGKTI 300
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN---------------------- 356
+ K + D + T + D
Sbjct: 301 EGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTTKTAANQLGGVDGKTEVVTIDGK 360
Query: 357 ---------------------EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
E ++ ID + A +G++ +R +
Sbjct: 361 TYNASKAEGHNFKAQPELAEAAAKTTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITN 420
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+ + + R+ D+D A+E + +S Q
Sbjct: 421 LGNTVNNLSSARSRIEDSDYATEVSNMSRAQ 451
>gi|87242462|gb|ABD33770.1| flagellin [Bacillus thuringiensis serovar pirenaica]
Length = 422
Score = 155 bits (390), Expect = 2e-35, Method: Composition-based stats.
Identities = 50/422 (11%), Positives = 128/422 (30%), Gaps = 10/422 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + M
Sbjct: 1 AKMSTAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGISLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++ E L+ Q+ I++ + FN + L
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTDKNQGALDKEFAALKEQIDYISKNTEFNDKKLLDGSN 120
Query: 139 GSSTAS-------IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
+ + I + +
Sbjct: 121 KAIAIQTLDSDDKGKQIDISLSDSSTTALKINNLSIAANGLGIGSGNKLVGVADNTIANA 180
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
+ D D A + + L A +
Sbjct: 181 SADTLSKLDASTGDTDTKRTAAVKAFTDQYKDLKVAMNAKDVETIDAAIKKFEGENTLEN 240
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
A AA + + + + A +A+ + K ++ + + +
Sbjct: 241 AKAIGAAFKGAAKATLTADITTADAASKALSDLDTNSTTDSRKTAMKAFVAEFDKVKGSM 300
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
++ +++ S+ D + + + ID
Sbjct: 301 NSSDVTRISDAIDRFSKTDDSGNTLEAARAIGDAFKAATTDGKTSTATDANSAIKAIDAA 360
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
++ + +G+ +R+ + +K ++ ++ DADMA E + ++ + +
Sbjct: 361 LETIASNRATLGATLNRLDFNVNNLKNQASSMASAASQVEDADMAKEMSEMTKFKILNEA 420
Query: 432 AV 433
+
Sbjct: 421 GI 422
>gi|50082709|gb|AAT70052.1| flagellin [Pectinatus cerevisiiphilus]
Length = 424
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 64/430 (14%), Positives = 148/430 (34%), Gaps = 6/430 (1%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A++ + + L +VSSG++++ AADN A ++I++ M++ +L +
Sbjct: 1 ALNTLNIMGTNSNALSKSLQKVSSGMKINSAADNPAGYAISERMRTQIRSLDQDNQNAKN 60
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFN 129
G + + A+ +S +D++ T+K K+ + + + + I ++ +
Sbjct: 61 GQNMLKTAEGAVSSTVDILKTLKEKVLDAANDTNTTFDRNTIQDYMNQAIDQINDNANAS 120
Query: 130 GENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGL 189
L D + A+ +V + + + +D L+ T
Sbjct: 121 YNGKLLVDGSMNKATAGATVTYTNESLGTATDFGSALTDLVDRNGNSLNILDKDTVSISY 180
Query: 190 LDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIP 249
+ + V V+ + + + + S A + A+G+
Sbjct: 181 VVNGKTMTTSFSVGSSKLSDVFGSVTSATGYSDFANSVSFGNTFADSQIGTTAEGLMMHT 240
Query: 250 VPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ A ++ SG G+ + I + +D V+ + + + + ++
Sbjct: 241 ADGTSVLAISSSASGVGGNIAGFT------ISITGTDGNVKKSVNSKLDAWSEQISAQDK 294
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
N R L + ++ + ++ +D
Sbjct: 295 SNDNAVTMQIGTKANQSIRVGLSDMRAQALGLQGVSTDGSVQNLDITTRANANASINVLD 354
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
++ A KIGS+ SR+ +D + + V+ + DADMA E T +
Sbjct: 355 NAVQKALKEQTKIGSVESRLDYTQDNLTTQSENVQASESTIRDADMAKEMTEYTKNNVLM 414
Query: 430 QLAVQALSIV 439
Q + L+
Sbjct: 415 QASQAMLAHA 424
>gi|116563807|gb|ABJ99916.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Haifa]
gi|116563813|gb|ABJ99919.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Hadar]
gi|116563829|gb|ABJ99927.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Hadar]
Length = 444
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 70/444 (15%), Positives = 122/444 (27%), Gaps = 47/444 (10%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQ---------ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
I Q D T LD T G L
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKKYDVDSTGVTQSLDLKTAGITGATLKAGITGTT 180
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
E +KD V S + TT A A G ++
Sbjct: 181 TETGSVKDGKVYYDADSKNYYVEVDFTDTTDKAAHAGFYKADVDADGNVSLATGATKEAK 240
Query: 258 APN-----------------------------------TTSGTSGSKSPSVAASATYIRM 282
N T + +
Sbjct: 241 PTNAVEVEKTIDEKPLKASSSVQDALKASGIADAVAEAATVVKMSYTDKNGKTIDGGYGI 300
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
D + AT + + T+ T + S
Sbjct: 301 KVGDDYYAATKEKDGSYSINSTSYTDKDGNTKTALNQLGGADGKTEVVSIDGKTYNASKA 360
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + A E + ID + A +G++ +R + + +
Sbjct: 361 AGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVNN 420
Query: 403 VEKGVGRLVDADMASESTRLSALQ 426
+ R+ D+D A+E + +S Q
Sbjct: 421 LSSARSRIEDSDYATEVSNMSRAQ 444
>gi|116563767|gb|ABJ99896.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Binza]
gi|116563769|gb|ABJ99897.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Binza]
gi|116563771|gb|ABJ99898.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Orion]
gi|116563773|gb|ABJ99899.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Orion]
Length = 451
Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats.
Identities = 63/451 (13%), Positives = 123/451 (27%), Gaps = 54/451 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE------- 199
I Q +D + +D++ Y
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKKYDVDNTAVTNPNYVDGAALSTTMPTAAEIKTA 180
Query: 200 -PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
V + ST K+ + + AA +AK + L
Sbjct: 181 IGTGAGTPAVKGNEVQFDKSTGKYYVEIEGYSAPDAAKNGIYEAKVADNGTISLETGTKK 240
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
T V + + S ++ +
Sbjct: 241 IGTAMPAGAEVITHVQKKDQPVVVDASVKDALKAGGVDDAVADTAQLVKMSYTDKNGKTI 300
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN---------------------- 356
+ K + D + T + D
Sbjct: 301 EGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTTKTAANQLGGVDGKTEVVTIDGK 360
Query: 357 ---------------------EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
E ++ ID + A +G++ +R +
Sbjct: 361 TYNASKAEGHNFKAQPDLAEAAAKTTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITN 420
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+ + + R+ D+D A+E + +S Q
Sbjct: 421 LGNTVNNLSSARSRIEDSDYATEVSNMSRAQ 451
>gi|116563815|gb|ABJ99920.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Kedougou]
Length = 440
Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats.
Identities = 55/440 (12%), Positives = 113/440 (25%), Gaps = 43/440 (9%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
I Q +D + + + Y +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLTVQQKYKVSDTAATVTGYADTTIALDNSTFKASATGL 180
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ G + + + + +
Sbjct: 181 GGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKDGYYEVSVDKTNGEVTLAGGATSPLTGG 240
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + + A T +T + D
Sbjct: 241 LPATATEDVKNVQVANADLTEAKAALTAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGD 300
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAY------------------------------- 355
+ D S+ T T T
Sbjct: 301 DYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHN 360
Query: 356 ---------NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
E + ID + +G++ +R + + + +
Sbjct: 361 FKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSA 420
Query: 407 VGRLVDADMASESTRLSALQ 426
R+ D+D A+E + +S Q
Sbjct: 421 RSRIEDSDYATEVSNMSRAQ 440
>gi|116563739|gb|ABJ99882.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Blockley]
gi|116563741|gb|ABJ99883.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Blockley]
Length = 440
Score = 154 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 59/440 (13%), Positives = 120/440 (27%), Gaps = 43/440 (9%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRITSAKDDAAGQAIANRFTANITGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELGVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTHFNGVKVLGQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
I Q +D + + ++ + +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKAYDVQATVENRVKLDTSALTADAIKGGVTGATT 180
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
++ D + + + + + F + T A AA + +
Sbjct: 181 AGALKDGKVYSNGTDYYVEVSFADATDSGKNGFLKVDVNTTTGAVTVPAAAANTVAAKPA 240
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
G + D A + + + D
Sbjct: 241 GVSEVTEVQGLNTPSSAVQDQLTAAGVSAADAAKSEVVKMSYTDKNGKTIDGGFGVKVGD 300
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAY------------------------------- 355
K D S+ T
Sbjct: 301 DIYAATKNKDGSISINATEYTDKDGNTKTALNQLGGVDGKTEVVTIDGKTYNASKAAGHD 360
Query: 356 ---------NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
E + ID + A +G++ +R + + + +
Sbjct: 361 FKAQPELAEAAATTTENPLQKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSSA 420
Query: 407 VGRLVDADMASESTRLSALQ 426
R+ D+D A+E + +S Q
Sbjct: 421 RSRIEDSDYATEVSNMSRAQ 440
>gi|116563775|gb|ABJ99900.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Give]
gi|116563777|gb|ABJ99901.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Give]
gi|116563823|gb|ABJ99924.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Panama]
gi|116563839|gb|ABJ99932.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Panama]
gi|116563857|gb|ABJ99941.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Panama]
gi|116563863|gb|ABJ99944.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Panama]
Length = 445
Score = 154 bits (387), Expect = 4e-35, Method: Composition-based stats.
Identities = 64/445 (14%), Positives = 123/445 (27%), Gaps = 48/445 (10%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
I Q +D + + S + L+ +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKKYDVKSEAVKSGGGATLNTTGLNDAALKTGVGG 180
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ A ++ A G+ + V P TT T
Sbjct: 181 ATNGTAAIKDGKVFFDATDNKYFIEVEGLTAGDATKNGVYEVSVADDGTVTMPTTTKVTG 240
Query: 267 GSKSPSVAASATYIRMGNSDIW-------------------------------------- 288
G + + A + T +
Sbjct: 241 GMPATATAVTETQPKPVALSTAVKDQLTDSGISAADAAKGQLVTMSYTDKNGKTIDGGFG 300
Query: 289 -------VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
AT + T T + S
Sbjct: 301 VKVGANIYAATKNKDGSFSINTTEYTDKGGNTKTALNQLGGADGKTEVVSIDGKTYNASK 360
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ + A E ++ ID + A +G++ +R + + +
Sbjct: 361 AAGHNFKAQPELAEAAATTTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVN 420
Query: 402 AVEKGVGRLVDADMASESTRLSALQ 426
+ R+ D+D A+E + +S Q
Sbjct: 421 NLSSARSRIEDSDYATEVSNMSRAQ 445
>gi|255262022|ref|ZP_05341364.1| flagellin protein [Thalassiobium sp. R2A62]
gi|255104357|gb|EET47031.1| flagellin protein [Thalassiobium sp. R2A62]
Length = 423
Score = 154 bits (387), Expect = 4e-35, Method: Composition-based stats.
Identities = 114/451 (25%), Positives = 183/451 (40%), Gaps = 28/451 (6%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ IN +L Q +S+G V+ A DNAA W+I++ M++D
Sbjct: 1 MSSILTNNGAMVALQTLKSINSDLGKTQSMISTGKEVASAKDNAAVWAISKTMEADVKGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
A+SD++ LG S V + + D+++ IK KI A E D +Q++I+ L Q++
Sbjct: 61 KAISDSLSLGQSTVAVGRNAAETVTDLLTDIKGKIVAAQEENVDRGKLQTDISALTEQIK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + FNG+N + S A+ + D N I +D + + +
Sbjct: 121 SVVGAAQFNGQNLVDGSNTGSNANGNTGIDILASLDRNSSGGIAASSIGVDTQNLSTTAG 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
TD T G + + ++ + T A N T
Sbjct: 181 TDITTGTGTGSADISTLAANGGADLVTITGFTFLDTSGAAAASAALKGSTAGVDLNETNG 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
G A + T+ S + + + + D TT ++T +
Sbjct: 241 LVVGDAVELQIGDIKGTYRVSEGDTNASVATGIKDAMQNAGLSTDDFAFDLTTAGTLTIE 300
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + + ++ D N
Sbjct: 301 NLTSEANIGVSYEVSRGSGRLASLED----------------------------INVSTD 332
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+S I+ + A AA GS+ R+ Q FI + D+++ G+G +VDADM S
Sbjct: 333 PATALSSIEDMLTGAIDAAASFGSVEGRLETQASFISSLSDSLKSGIGAMVDADMEETSA 392
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQ QQQL VQ+LSI N + I+SLFR
Sbjct: 393 RLQALQVQQQLGVQSLSIANQAPQSIMSLFR 423
>gi|116563853|gb|ABJ99939.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Kedougou]
Length = 440
Score = 154 bits (387), Expect = 4e-35, Method: Composition-based stats.
Identities = 55/440 (12%), Positives = 113/440 (25%), Gaps = 43/440 (9%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
I Q +D + + + Y +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQQKYKVSDTAATVTGYADTTIALDNSTFKASATGL 180
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ G + + + + +
Sbjct: 181 GGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKDGYYEVSVDKTNGKVTLAGGATSPLTGG 240
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + + A T +T + D
Sbjct: 241 LPATATEDVKNVQVANADLTEAKAALTAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGD 300
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAY------------------------------- 355
+ D S+ T T T
Sbjct: 301 DYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHN 360
Query: 356 ---------NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
E + ID + +G++ +R + + + +
Sbjct: 361 FKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSA 420
Query: 407 VGRLVDADMASESTRLSALQ 426
R+ D+D A+E + +S Q
Sbjct: 421 RSRIEDSDYATEVSNMSRAQ 440
>gi|116563761|gb|ABJ99893.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Agama]
gi|116563793|gb|ABJ99909.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Kentucky]
gi|116563835|gb|ABJ99930.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Kedougou]
Length = 440
Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats.
Identities = 55/440 (12%), Positives = 113/440 (25%), Gaps = 43/440 (9%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
I Q +D + + + Y +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQQKYKVSDTAATVTGYADTTIALDNSTFKASATGL 180
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ G + + + + +
Sbjct: 181 GGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKDGYYEVSVDKTNGEVTLAGGATSPLTGG 240
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + + A T +T + D
Sbjct: 241 LPATATEDVKNVQVANADLTEAKAALTAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGD 300
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAY------------------------------- 355
+ D S+ T T T
Sbjct: 301 DYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHN 360
Query: 356 ---------NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
E + ID + +G++ +R + + + +
Sbjct: 361 FKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSA 420
Query: 407 VGRLVDADMASESTRLSALQ 426
R+ D+D A+E + +S Q
Sbjct: 421 RSRIEDSDYATEVSNMSRAQ 440
>gi|116563791|gb|ABJ99908.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Kentucky]
Length = 440
Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats.
Identities = 55/440 (12%), Positives = 113/440 (25%), Gaps = 43/440 (9%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
I Q +D + + + Y +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQQKYKVSDTAATVTGYADTAIALDNSTFKASATGL 180
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ G + + + + +
Sbjct: 181 GGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKDGYYEVSVDKTNGEVTLAGGATSPLTGG 240
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + + A T +T + D
Sbjct: 241 LPATATEDVKNVQVANADLTEAKAALTAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGD 300
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAY------------------------------- 355
+ D S+ T T T
Sbjct: 301 DYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHN 360
Query: 356 ---------NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
E + ID + +G++ +R + + + +
Sbjct: 361 FKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSA 420
Query: 407 VGRLVDADMASESTRLSALQ 426
R+ D+D A+E + +S Q
Sbjct: 421 RSRIEDSDYATEVSNMSRAQ 440
>gi|224579297|gb|ACN58226.1| flagellin [Escherichia coli P12b]
Length = 481
Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats.
Identities = 57/476 (11%), Positives = 140/476 (29%), Gaps = 54/476 (11%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ + ++ +R+SSGLR++ A D+AA +IA S+ L+ + G S
Sbjct: 1 LRHINKNQSSMSTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISV 60
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ +S+ + + ++ +D SIQ EI S++ ++ + FNG
Sbjct: 61 AQTTEGALSEINNNLQRVRELTVQASTGTNSASDLSSIQDEIKSRLSEIDRVSSQTQFNG 120
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
N L D + A I + + + + +
Sbjct: 121 VNVLAKDGKMNIQVGANDGQTITIDLKKIDSATLGLTGFDVQKKSTISKAAVEITTTTTP 180
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
+ + ++ + +S K + A + +A G +
Sbjct: 181 YTEGNNTIALKSSDTANMKDGTTNAKVSFSFDKATNSYFAIVADGSADNTLKNGTYIATL 240
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
++T+ + + + + A ++ + V A ++++ + + K
Sbjct: 241 DSSGEVTLGSSTTAPNTATAVTKNQVAGTPVTTSTPVAVTAAANTALSNAGVTGSVELVK 300
Query: 311 VGNTHYYVDTESTTLDSRKD---------------------------------------- 330
+ +T + +
Sbjct: 301 LTSTDSAGNATDAGYGLQAADGKIYATDYDGTNATAFTAKTATYTDASGNTQTSAITLGG 360
Query: 331 -----------LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + H + + ++ +D I
Sbjct: 361 TDGKTELVTLGSGANAKTYTASDLDGADLHDPANTVKPIADNSKPLAALDAAIASVDKFR 420
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G++ ++++ + + + R+ DAD A+E + +S Q QQ
Sbjct: 421 SSLGAVQNQLNSAITNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 476
>gi|209515737|ref|ZP_03264600.1| flagellin domain protein [Burkholderia sp. H160]
gi|209503764|gb|EEA03757.1| flagellin domain protein [Burkholderia sp. H160]
Length = 483
Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats.
Identities = 70/483 (14%), Positives = 151/483 (31%), Gaps = 32/483 (6%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI +N ++++A + L L R+SSG R++ AAD+AA +I+ +++ L
Sbjct: 1 MLSINSNINSLTAQENLTGSGSALSQAITRLSSGKRINSAADDAAGLAISTTLQTAINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S V A G+S+ + I++ ++ ++Q E+ Q S
Sbjct: 61 NQGVSNANDGVSMVQTASTGLSQITQSLQKIRSLANEAAGGSLSASNQAALQQEVAQQIS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRD--------------------- 156
++ +A +++NG N L G + +V + +
Sbjct: 121 EVNRLASQTTYNGINLLNGTAGLINVQVGSNVGQTINLNLSQGVSAASLGSGPVQAGNTL 180
Query: 157 --------DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ ++ + +L + T G ++ +
Sbjct: 181 GTITGLDLNANGTANSSGGTGAITQINILSNGTGGFTFTDQNNQVLSSATSNALFSVAGS 240
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ ++ +++T S A A L + S +
Sbjct: 241 ASGISTISLATGAGNGLLQSNELTSINQAFSTGGGSAAAAGTVLGTLSGLNLNATNGSAA 300
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + N +N + + TT+ S
Sbjct: 301 TAGISNTITSITVESNGTGGFEYVDQNGSQLSSTAATNLFTSSTAGISAFNGTQTTIGST 360
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
S ++ T N+ + + +D + +G+ +R
Sbjct: 361 TAAQTSGSSLATVNTDNVPTSVANINVSTTAGANLAMESVDNALATINNIQATLGAAQNR 420
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + ++ DAD A E+ +S Q QQ + L+ N+ ++L
Sbjct: 421 FTGIATSQQAESTDLSSAHSQITDADFAQETANMSKSQVLQQAGISVLAQANSQAQQVLK 480
Query: 449 LFR 451
L +
Sbjct: 481 LLQ 483
>gi|89069828|ref|ZP_01157163.1| flagellin protein [Oceanicola granulosus HTCC2516]
gi|89044629|gb|EAR50745.1| flagellin protein [Oceanicola granulosus HTCC2516]
Length = 422
Score = 153 bits (385), Expect = 6e-35, Method: Composition-based stats.
Identities = 107/451 (23%), Positives = 181/451 (40%), Gaps = 29/451 (6%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ +N +L Q +S+G V+ A DN+A W+I+++M+SD
Sbjct: 1 MSSILTNNGAMVALQTLKTLNQDLSKTQSMISTGKAVATAKDNSAVWAISKVMESDVQGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
A+S+++ LG S V +A+ D+++ +KNKI D IQ ++ L Q++
Sbjct: 61 KAISNSLALGESTVSVARQASETVTDLLTQMKNKIVDAQADNVDRSKIQDDVQALTDQIK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + FNG N + + D + +T + +D + + +
Sbjct: 121 SVVGAAQFNGLNLVNGSSSDFNTNGNVGTNILSSLDRDNLGGVTVSNIGVDAQNLSTTTG 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + + + S + + +T
Sbjct: 181 DALTAATNSVATLTENGGASDTTQVALGSAFLDASGGATG-------------------- 220
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ A T+ +G V G+ + T ++
Sbjct: 221 ---------TTALKSSDAGVDTAVATGLVEGDVMRLKIGNIEGSYVVREGDTADAVLSGL 271
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + + + + +++ S T + K
Sbjct: 272 KNGLMAAGLDDTKFNLSLGSGTLDVENLTSDAGIGISLSQERGTGALAQLATLDVSTKAG 331
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
E +S I+ I+ AT AA GS+ SR+ Q F+ + ++++ G+G LVDADM S
Sbjct: 332 AETALSNIEGMIQSATNAASAFGSVQSRVETQASFVSDLTNSLKSGIGALVDADMEETSA 391
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQ QQQL VQALSI N + ILSLFR
Sbjct: 392 RLQALQVQQQLGVQALSIANQAPQSILSLFR 422
>gi|33590243|gb|AAQ22683.1| flagellin [Escherichia coli]
Length = 525
Score = 153 bits (385), Expect = 7e-35, Method: Composition-based stats.
Identities = 65/522 (12%), Positives = 137/522 (26%), Gaps = 72/522 (13%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKS------- 55
I TN ++ L +L +R+SSGLR++ A D+AA +IA +
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 56 ---------------------------DNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
LS + S ++ + +++ + +
Sbjct: 64 ASRNANDGISVAQTTEGALSEINNNLQRIRELSVQATNGTNSDSDLNSIQDEITQRLSEI 123
Query: 89 STI---------KNKITAGVERGTDSKSIQSEITQLQSQLR------------------- 120
+ K + + + I ++
Sbjct: 124 DRVSNQTQFNGVKVLASDQTMKIQVGANDGETIEIALDKIDAKTLGLDNFSVAPGKVPMS 183
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
S + + + + AK+ ++ D T T ++
Sbjct: 184 SAVALKSEAAPDLTKVNATDGSVGGAKAFGSNYKNADVETYFGTGNVQDTKDTTDATGTA 243
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + + + S + A F
Sbjct: 244 GTKVYQVQVEGQTYFVGQDNNTNTNGFTLLKQNSTGYEKVQVGGKDVQLANFGGRVTAFV 303
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ G AT + S + V + +
Sbjct: 304 EDNGSATSVDLAAGKMGKALAYNDAPMSVYFGGKNLDVHQVQDTQGNPVPNSFAAKTSDG 363
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE--- 357
+ A GNT D ++ + T + +
Sbjct: 364 TYIAVNVDAATGNTSVITDPNGKAVEWAVKNDGSAQAIMREDDKVYTANITNKTATKGAE 423
Query: 358 -------KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
LA +S +D + +G++ +R + + + R+
Sbjct: 424 LSASDLKALATTNPLSKLDEALAKVDKLRSSLGAVQNRFDSAITNLGNTVNNLSSARSRI 483
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
DAD A+E + +S Q QQ L+ N +T +LSL +G
Sbjct: 484 EDADYATEVSNMSRAQILQQAGTSVLAQANQTTQNVLSLLQG 525
>gi|95929889|ref|ZP_01312630.1| flagellin-like [Desulfuromonas acetoxidans DSM 684]
gi|95134185|gb|EAT15843.1| flagellin-like [Desulfuromonas acetoxidans DSM 684]
Length = 578
Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats.
Identities = 55/398 (13%), Positives = 108/398 (27%), Gaps = 8/398 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN +A++A + L +L R+SSGLR++ A D+AA +I+ M S +
Sbjct: 3 MT-INTNVAALNAQRNLGSAQTDLGTAMQRLSSGLRINSAKDDAAGLAISDRMTSQVKGM 61
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE----RGTDSKSIQSEITQLQ 116
+ + G S + A+ + + +++ + +D S+Q+E+ Q++
Sbjct: 62 NQAVRNLNDGISLLQTAEGALQEVTNLIQRGRELAVQAANEATLSDSDKASLQAEVEQIK 121
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
++ I + ++FNG L G + T
Sbjct: 122 LEIDRIGQTTTFNGTKVLSHGPGGTIGGDPDRAEVVESLKSAWLRYSEDRVEEYYGLTAE 181
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
D + + K +S
Sbjct: 182 NVDFNVQFIDDPDSDAVAYVGGSGTEVDSYGRYTAIPLTVNMAKYDPEDPSSMWEYDRVV 241
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
+ GT+ A + S + A
Sbjct: 242 VHEMTHAIMGANTSLDSIRNEGFWFVEGTAEFMMGGDERLAIDLGNAGSADNLIAAFDPD 301
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
++ A H + + + + + A
Sbjct: 302 NIDSSSQYAASYAATRFLHDAIKDAGGSGIDEVMTYLQDHPEDGVSGNALDNAIQDLASR 361
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
++ +T I T G + S + L D
Sbjct: 362 HDTFAYANLADFETAI---TTQGGDFSTFISAMDLTND 396
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 32/330 (9%), Positives = 77/330 (23%)
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I ++ + + D G + SS
Sbjct: 248 AIMGANTSLDSIRNEGFWFVEGTAEFMMGGDERLAIDLGNAGSADNLIAAFDPDNIDSSS 307
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ IK D ++ L +
Sbjct: 308 QYAASYAATRFLHDAIKDAGGSGIDEVMTYLQDHPEDGVSGNALDNAIQDLASRHDTFAY 367
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + ++ + K + D
Sbjct: 368 ANLADFETAITTQGGDFSTFISAMDLTNDDVGAIGGLDADGGEVFTNTSVVADKPWVYDD 427
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ ++ + + + N D +
Sbjct: 428 DPLEGFVETWPSADELGTEEIASRAFQFQAGANAGQMISVTLGSADSTVLNIDDVDISSD 487
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+S D+ ++ G +G++ +R+ ++ + + + R++DAD+A E++
Sbjct: 488 ATLAISRFDSALEYIDQMRGNMGAVMNRLESSIANLQNVTENLSAARSRILDADIAQETS 547
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
++ QQ V L+ N + LSL
Sbjct: 548 IMTKSNILQQAGVSILAQANQAPQLALSLL 577
>gi|268680845|ref|YP_003305276.1| flagellin domain protein [Sulfurospirillum deleyianum DSM 6946]
gi|268618876|gb|ACZ13241.1| flagellin domain protein [Sulfurospirillum deleyianum DSM 6946]
Length = 481
Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats.
Identities = 82/479 (17%), Positives = 146/479 (30%), Gaps = 31/479 (6%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN SA++A L N L ++SSGLR++ AAD+A+ SIA ++S +L
Sbjct: 3 INTNVSALAAQTNLSKTNSALSSSLSKLSSGLRINTAADDASGMSIADSLRSQANSLGQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
G S IA M + I ++ TIK K T + G K++QS+I++L +L
Sbjct: 63 IANANDGVSIAQIADGAMDEQIKILDTIKTKATQAAQDGQSASSRKALQSDISKLMEELD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SFNG+N L ++ + + + +
Sbjct: 123 MIAGTTSFNGKNLLSGTFTNAEFQVGAYNNQTVNMSIGATSSDKIGQTRFETSEMGTTLG 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA---------- 230
+ A+ + T S +
Sbjct: 183 AQTIVYTDANGTATTFETAIVSTSAGTGIGAVAAVINKNSEATGVTASWSLTQTGTAAVA 242
Query: 231 ------------------WLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ ++T I + S
Sbjct: 243 SGTVTNLTINGTVVAASLDVADNDSTGVLIDAINQYSATTGVTASIDQEGQLELTSTDGR 302
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
A +G + N T+ ++ S +
Sbjct: 303 AIQVAGLATVGTIADGTSTGRLTLTKAGAADINMTITNFATSNVASLGLSDMMGEISAAN 362
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
E ++ + + T + M+ T + + IGS+ +++
Sbjct: 363 AEAIGAFTSDNASGSGQKLTAGVTTYAGAQAMIKIAQTAQEKLDSVRADIGSVQNQLTST 422
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ I + + V ++ D D A ES S Q ALS N++ +L L +
Sbjct: 423 INNISVTQVNVTSAESQIRDVDFAEESASFSKYNIMAQAGSYALSQANSTQQNVLKLLQ 481
>gi|33590245|gb|AAQ22684.1| flagellin [Escherichia coli]
Length = 525
Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats.
Identities = 65/522 (12%), Positives = 137/522 (26%), Gaps = 72/522 (13%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKS------- 55
I TN ++ L +L +R+SSGLR++ A D+AA +IA +
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 56 ---------------------------DNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
LS + S ++ + +++ + +
Sbjct: 64 ASRNANDGISVAQTTEGALSEINNNLQRIRELSVQATNGTNSDSDLNSIQDEITQRLSEI 123
Query: 89 STI---------KNKITAGVERGTDSKSIQSEITQLQSQLR------------------- 120
+ K + + + I ++
Sbjct: 124 DRVSNQTQFNGVKVLASDQTMKIQVGANDGETIEIALDKIDAKTLGLDNFSVAPGKVPMS 183
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
S + + + + AK+ ++ D T T ++
Sbjct: 184 SAVALKSEAAPDLTKVNATDGSVGGAKAFGSNYKNADVETYFGTGNVQDTKDTTDATGTA 243
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + + + S + A F
Sbjct: 244 GTKVYQVQVEGQTYFVGQDNNSNTNGFTLLKQNSTGYEKVQVGGKDVQLANFGGRVTAFV 303
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ G AT + S + V + +
Sbjct: 304 EDNGSATSVDLAAGKMGKALAYNDAPMSVYFGGKNLDVHQVQDTQGNPVPNSFAAKTSDG 363
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE--- 357
+ A GNT D ++ + T + +
Sbjct: 364 TYIAVNVDAATGNTSVITDPNGKAVEWAVKNDGSAQAIMREDDKVYTANITNKTATKGAE 423
Query: 358 -------KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
LA +S +D + +G++ +R + + + R+
Sbjct: 424 LSASDLKALATTNPLSKLDEALAKVDKLRSSLGAVQNRFDSAITNLGNTVNNLSSARSRI 483
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
DAD A+E + +S Q QQ L+ N +T +LSL +G
Sbjct: 484 EDADYATEVSNMSRAQILQQAGTSVLAQANQTTQNVLSLLQG 525
>gi|285018201|ref|YP_003375912.1| flagellin and related hook-associated proteins [Xanthomonas
albilineans GPE PC73]
gi|283473419|emb|CBA15924.1| probable flagellin and related hook-associated proteins
[Xanthomonas albilineans]
Length = 395
Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats.
Identities = 57/453 (12%), Positives = 128/453 (28%), Gaps = 64/453 (14%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + NL ++S+G RV+ A D+AA +I + + L+
Sbjct: 4 VINTNIMSLNAQRNLNLNSANLATTIQQLSTGKRVNSAKDDAAAINIGENFTTQINGLNV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M + + + I+ D +++ +E+TQL S++
Sbjct: 64 AGRNANDGISLAQTAEGAMVEIGNNLQRIRELAVQSANATNSTNDRQALNAEVTQLTSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FNG L + + + + + I + +
Sbjct: 124 DRVANQTDFNGTKLLNGSFTGALFQVGANAGQTIGINTIVDANINVLGKTGFAAAQTGSA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + +
Sbjct: 184 ALASGTATASGSFSGMVVNGINIDSVSVA------------------------------- 212
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + AA + S + + + + + +
Sbjct: 213 --TGDVGSDVSTKIAAAINNKMDQTGVYASVDSTSGALKLESIKGGQDFSFTAGSATGAT 270
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
++N+ +A LD + L + D +
Sbjct: 271 GITFSNAGIAATATAATGSTNYVKDLDISTFDGAQKALSIVDNALKAVNSSRADMGAVQN 330
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ + + + +A+ R++D D A +
Sbjct: 331 RFTSAIANLSSASENLSASR----------------------------SRIIDTDYAKTT 362
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
L+ Q QQ L+ ++ +LSL +G
Sbjct: 363 ADLTREQILQQAGTAMLAQAKSAPQSVLSLLQG 395
>gi|170742082|ref|YP_001770737.1| flagellin domain-containing protein [Methylobacterium sp. 4-46]
gi|168196356|gb|ACA18303.1| flagellin domain protein [Methylobacterium sp. 4-46]
Length = 494
Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats.
Identities = 129/494 (26%), Positives = 200/494 (40%), Gaps = 43/494 (8%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTS+LTN +AM+A L+ IN NL+ +RVS+G RVS AADNAAYWSIA ++SDN +L
Sbjct: 1 MTSLLTNSAAMTALTTLKLINANLDTTSNRVSTGQRVSAAADNAAYWSIATAVRSDNASL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV D++GLG+S V A G++ I + I+ K+ ++ GTD +Q+EI+ +Q++++
Sbjct: 61 GAVKDSLGLGASAVGTAYNGINSIISDLQNIRAKLQTALQGGTDRSKVQTEISAIQNKMK 120
Query: 121 DIARGSSFNGENWLRTDLGSST-----------------------------------ASI 145
A S NG NWL D ++ +
Sbjct: 121 ATADSSVSNGVNWLSVDSSATNARFRPVESVVAGFARNAAGTVSFSTIDVNVNAIKLYDV 180
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ I S + L S T+ +DR
Sbjct: 181 NATSITSAATQAQFTAGQSLTGTPLFTNGTADFSGTNEVNFTLQIDRLGTAGGAAGTAAG 240
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
+ ST S + G +T+P A TT G
Sbjct: 241 AYGGKVNIVLNNSTLITAANDRSKVTTDEFLRAINNVIGASTLPQTGAGGSAVAITTGGL 300
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL 325
G + ++ +S + T T+ G T + T
Sbjct: 301 KGLITAALDSSGRLVFRTTDTGATLTATLTVGTATAGNTLKDFGFGTTAGLAATGKGTDA 360
Query: 326 DSRK--------DLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
+ + G ++ + ++++++ +D + T
Sbjct: 361 GTTTARGIIDTSVGSYDASFGGGSYSIANFDISKLVGTAGDSNLKDIIAAVDKALAAVTD 420
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
A K+G+ ++I Q F+ + A +G LVDAD+ EST+L ALQTQQQLAVQALS
Sbjct: 421 AGTKLGAGKNQIEGQTSFVDSLMKANTATIGTLVDADIEEESTKLKALQTQQQLAVQALS 480
Query: 438 IVNNSTARILSLFR 451
I N+S +L+LFR
Sbjct: 481 IANSSGQALLTLFR 494
>gi|117928042|ref|YP_872593.1| flagellin domain-containing protein [Acidothermus cellulolyticus
11B]
gi|117648505|gb|ABK52607.1| flagellin domain protein [Acidothermus cellulolyticus 11B]
Length = 399
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 58/448 (12%), Positives = 120/448 (26%), Gaps = 53/448 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A+ A + L L ++SSG R++ AAD+AA SI+Q +++ G L
Sbjct: 5 INTNVDALDAYRNLSMTQSKLSDSLQKLSSGYRINKAADDAAGLSISQKLQAQIGGLQQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
G + V A +++ ++ + G Q+ Q++++ +
Sbjct: 65 VKNAQDGINVVQTADGALNEVQSILQRMNVLAVQAANTG---SQDQAARQAAQTEIQQLN 121
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
G N S S G V T + + + +
Sbjct: 122 ADLDAIGNNTQFGQSKLLDGSFGSSAAAKSFAVSGGSVTAATASFKISGTFNGVALANAT 181
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + +G W +++ A
Sbjct: 182 VNVANGTYSTASSLQTALQNGIDATLTANGITAGAVQASVTDEGNGVWKVTLSSSAVGAG 241
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ N S
Sbjct: 242 NTFSTSATTGLTDGNGNAVSL--------------------------------------- 262
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + + + TD +
Sbjct: 263 -----------NGTTSAQGSGGGVFQIGAQAGQTQTVQIGAVSANALGTDTIDLVNNASA 311
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I + I + +G+ + + + + + ++ + D DMA E +
Sbjct: 312 AIATIASAITTVSTERSSLGAYQNGFQHIINNLNVTVENLQASNSTIQDTDMAQEMVHFT 371
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ V L+ N T +L L +
Sbjct: 372 QAQVLQQAGVSMLAQANVETQAVLKLLQ 399
>gi|110677572|ref|YP_680579.1| hypothetical protein RD1_0160 [Roseobacter denitrificans OCh 114]
gi|109453688|gb|ABG29893.1| hypothetical protein RD1_0160 [Roseobacter denitrificans OCh 114]
Length = 416
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 112/451 (24%), Positives = 167/451 (37%), Gaps = 35/451 (7%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+SAM A Q L+ IN +L +Q +S+G V A DNAA W+I+++M SD
Sbjct: 1 MSSILTNNSAMVALQTLKSINSDLGKIQSEISTGKTVESAKDNAATWAISKVMSSDVEGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
A+SD++ LG S V +A D+++ IK KI E D IQ++I L+ Q+
Sbjct: 61 RAISDSLSLGQSTVGVALDAAEGITDLLTEIKGKIVNSQEENVDRGKIQTDIVALRDQIS 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG N L + + A + D D T +
Sbjct: 121 SIAGAAQFNGLNLLSNTDNTEGSGTASILSSLDRAGDGTISPSNIDVSKQDLGTGAAEFG 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G L +S
Sbjct: 181 ATAVASAGDLIAVSAASAVGPAGATPVISFT----------------------------- 211
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A+ T + + + +V K
Sbjct: 212 ------ADGAAGGASYRITLTGAAANEWGTTAVNFEYVARDGDTEMDVSNNLLKQMNDYA 265
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + T + T + L + ++
Sbjct: 266 TANEFTNTTFTQDATTGAITVANTGAAADTLGVAVAENLDGTAAGGLAALADIDVSDADG 325
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ I+ I+ + AA +GS RI Q +F+ + D ++ G+G LVDADM + S
Sbjct: 326 AAAALASIEGLIQTSIDAAASLGSDGKRIETQNEFVGKLMDGLKSGIGSLVDADMEAASA 385
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+L ALQTQQQL VQALSI N + ILSLFR
Sbjct: 386 KLQALQTQQQLGVQALSIANQAPQTILSLFR 416
>gi|87242450|gb|ABD33764.1| flagellin [Bacillus thuringiensis serovar bolivia]
Length = 401
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 62/415 (14%), Positives = 135/415 (32%), Gaps = 17/415 (4%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M+S LS +D G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRSRESGLSVAADNTQNGISLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++Q E +LQ Q+ IA + FN +N L+ +
Sbjct: 61 NSVSNILLRMRDIANQSANGTNTDQNKVALQKEFGELQKQITYIADNTQFNDKNLLKENQ 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ ++ G I D V + + + + + +ST+ +
Sbjct: 121 TINIQTLDSDSAGKQIGIDLKAVTLDKLGI----KDIAIGNSTNNSVNLKEFRNAIAKLQ 176
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
P + + K K A A +
Sbjct: 177 SPSATDKDSRIADVNAAKEAFTKVKDLLKPTDATNLEKAFNKFAGDTSATNATAIHTSFN 236
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
T + + D + + + ++
Sbjct: 237 AIKTVVEENFATAQTKIGTDLAAAADGD----------HATLVPLAKTAFDAIKDSLSKE 286
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D + + ++ + DA + V+ ID +K
Sbjct: 287 DAQKMQDAFKAYDDAPDKDLARAISTTFSGMKTVDASATNVDALNSVAKIDEALKMVADN 346
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ S+R+ + +K ++ ++ DADMA E + ++ + + +
Sbjct: 347 RATLGATSNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGI 401
>gi|116563697|gb|ABJ99861.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Virchow]
gi|116563747|gb|ABJ99886.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Bovismorbificans]
gi|116563749|gb|ABJ99887.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Bovismorbificans]
gi|116563821|gb|ABJ99923.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Goldcoast]
gi|116563827|gb|ABJ99926.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Goldcoast]
gi|116563833|gb|ABJ99929.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Heidelberg]
gi|116563861|gb|ABJ99943.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Goldcoast]
Length = 438
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 59/438 (13%), Positives = 118/438 (26%), Gaps = 41/438 (9%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 K----------SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
+ + D VQ S ++ +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQQKYKVSDTAATVTGYTDSATAIDKSTFAASATTL 180
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
P + D+ AA+ +
Sbjct: 181 GGTPAITGDLKFDDTTGKYYADVSGTTAKDGVYEVTVAADGKVTLTGTPTGPITAGFPST 240
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNS----------------------------DIW 288
A + + + A +A + D +
Sbjct: 241 ATKDVKQTQQENADLTEAKAALTAAGVAAAGTASVVKMSYTDNNGKTIDGGLAVKVGDDY 300
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR 348
AT + T T + + S + +
Sbjct: 301 YSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFK 360
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
A E + ID + +G++ +R + + + +
Sbjct: 361 AQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARS 420
Query: 409 RLVDADMASESTRLSALQ 426
R+ D+D A+E + +S Q
Sbjct: 421 RIEDSDYATEVSNMSRAQ 438
>gi|73666305|gb|AAZ79829.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Cerro]
gi|73666307|gb|AAZ79830.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Cerro]
Length = 354
Score = 152 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 51/386 (13%), Positives = 107/386 (27%), Gaps = 36/386 (9%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ LS S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ G+D KSIQ EI Q +++ +A + FNG+ L D + A
Sbjct: 61 RVRELSVQAANGSNSGSDLKSIQDEIDQRLNEINRVAEQTDFNGKKVLSQDGQLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+D + + V
Sbjct: 121 NDGET----------------ITIDLQKIDKTELGLDKLDVTKGIATTVSSGASVVGDVK 164
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ + + + K D + + S
Sbjct: 165 IAAADFDNAKTTGGPAADKLSLTKDDKGNYFVKDVTATAKYYAATVDMTTGKISFDSDKD 224
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + T + S+ + + + ++
Sbjct: 225 VTATAGTPPAVTTLSREVKFDGADLKADQSLVKYKDDKGKDLYAIQTLDKDGNATFKSVT 284
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
D + + A + ++ ID +K A ++G++
Sbjct: 285 FAADGKTTEGTAVDLA-----------------ANVDPLAKIDDALKTVDAFRSQLGAVQ 327
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVD 412
+R + + + R+ D
Sbjct: 328 NRFESAITNLGNTVNNLSSARSRIED 353
>gi|194400780|gb|ACF70596.1| flagellin [Helicobacter callitrichis]
Length = 507
Score = 152 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 72/502 (14%), Positives = 131/502 (26%), Gaps = 55/502 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +A++A YNL+ +++SSGLR++ AAD+A+ IA ++S AL
Sbjct: 5 VNTNVNALNAHAVSTFTQYNLKNSMEKLSSGLRINKAADDASGMVIADSLRSQASALGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G + IA M + I ++ TIK K + IQ +I +L L
Sbjct: 65 IRNTNDGMGIIQIADKAMDEQIKILDTIKTKAVQAAQDGQSTQSRSMIQMDIKRLIEGLD 124
Query: 121 DIAR----------------------------------------------------GSSF 128
+I +S
Sbjct: 125 NIGNTTTYNGMALLSGQFSNKEFQVGAYSNQSIKASIGSTTSDKIGQVRVETGALVTASG 184
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
+ G + ++ I G + ++ +
Sbjct: 185 ETTVVFKNVDGVNDVTLESVKISHSAGTGLGVLAEVINKNSDKTGIRAQANAITTSNEAI 244
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
+ + + DI + S + F AT +
Sbjct: 245 KSGSMAGVMINGISIGDIIGIKKNDSDGRLVQAFNAATMHTGVEAYTDNFGRLMLRSTDG 304
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
A S K VR ++ + S +++
Sbjct: 305 RGIDLKIDGAVGGQGPISVEKVNGTHELTQGSTNYGRLSLVRTDARDIVVSGINISSTGY 364
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
K + +
Sbjct: 365 NDDKLVAQTTTNLRDVTGVFNADVKSASGANYNAVIASGGADLGAGVTSLRGAMVTMDIA 424
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
++ K +GS+ ++ + I + + V+ + + D A+ES+ S L
Sbjct: 425 ESAQKMLDKIRADLGSVQGQMVSTVNNITITQVNVKAAESGIREVDFAAESSEFSKLNIL 484
Query: 429 QQLAVQALSIVNNSTARILSLF 450
Q ALS N IL L
Sbjct: 485 AQSGSYALSQANAIQQNILRLL 506
>gi|116563805|gb|ABJ99915.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Coeln]
Length = 451
Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats.
Identities = 63/451 (13%), Positives = 123/451 (27%), Gaps = 54/451 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE------- 199
I Q +D + +D++ Y
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKKYDVDNTVVTNPNYVDGAALSTTMPTAAEIKTA 180
Query: 200 -PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
V + ST K+ + + AA +AK + L
Sbjct: 181 IGTGAGTPAVKGNEVQFDKSTGKYYVEIEGYSAPDAAKNGIYEAKVADDGTISLETGTKK 240
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
T V + + S ++ +
Sbjct: 241 IGTAMPAGAEVITHVQKKDQPVVVDASVKDALKAGGVDDAVADTAQLVKMSYTDKNGKTI 300
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN---------------------- 356
+ K + D + T + D
Sbjct: 301 EGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTTKTAANQLGGVDGKTEVVTIDGK 360
Query: 357 ---------------------EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
E ++ ID + A +G++ +R +
Sbjct: 361 TYNASKAEGHNFKAQPDLAEAAAKTTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITN 420
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+ + + R+ D+D A+E + +S Q
Sbjct: 421 LGNTVNNLSSARSRIEDSDSATEVSNMSRAQ 451
>gi|74311730|ref|YP_310149.1| flagellar filament structural protein [Shigella sonnei Ss046]
gi|391894|dbj|BAA04095.1| flagellin [Shigella sonnei]
gi|391896|dbj|BAA04094.1| flagellin [Shigella sonnei]
gi|73855207|gb|AAZ87914.1| flagellar filament structural protein [Shigella sonnei Ss046]
gi|323165277|gb|EFZ51065.1| flagellin [Shigella sonnei 53G]
Length = 524
Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats.
Identities = 61/521 (11%), Positives = 146/521 (28%), Gaps = 72/521 (13%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA--- 59
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 60 ------------------LSAVSDAIGLGSSKVDIA------KAGMSKAIDVMST----- 90
LS +++ + A + ++ D ++
Sbjct: 64 ASRNANDGISVAQTTEGALSEINNNLQRIRELSVQATNGTNSDSDLNSIQDEITQRLSEI 123
Query: 91 -----------IKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR---- 135
+K + + + I ++ G +
Sbjct: 124 DRVSNQTQFNGVKVLASDQTMKIQVGANDGETIEIALDKIDAKTLGLDNFSVALGKVPMS 183
Query: 136 ------TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGL 189
++ + + G + D+
Sbjct: 184 SAVALKSEAAPDLTKVNATDGSVGGAKAFGSNYKNADVETYFGTGNVQDTKDTTDATGTA 243
Query: 190 LDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIP 249
+ ++++VE Q + + +G K+ + +
Sbjct: 244 GTKVYQVQVEGQTYFVGQDNNTNTNGFTLLKQNSTGYEKVQVGGKDVQLANFGGRVTAFV 303
Query: 250 VPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+A + + + + A + Y N D+ T+ + + ++
Sbjct: 304 EDNGSATSVDLAAGKMGKALAYNDAPMSVYFGGKNLDVHQVQDTQGNPVPNSFAAKTSDG 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM----- 364
+ T +T++ + + + + + + Y + +
Sbjct: 364 TYIAVNVDAATGNTSVITDPNGKAVEWAVKNDGSAQAIMREDDKVYTANITNKTATKGAE 423
Query: 365 --------------VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+S +D + +G++ +R + + + R+
Sbjct: 424 LSASDLKALATTNPLSKLDEALAKVDKLRSSLGAVQNRFDSAITNLGNTVNDLSSARSRI 483
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DAD A+E + +S Q QQ L+ N +T +LSL R
Sbjct: 484 EDADYATEVSNMSRAQILQQAGTSVLAQANQTTQNVLSLLR 524
>gi|78047578|ref|YP_363753.1| flagellin [Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|78036008|emb|CAJ23699.1| flagellin and related hook-associated proteins [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 399
Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats.
Identities = 65/452 (14%), Positives = 133/452 (29%), Gaps = 59/452 (13%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + +L + ++SSG R++ A +AA +IA+ + L
Sbjct: 4 VINTNVMSLNAQRNLNTNSSSLALSIQQLSSGKRITSFAVDAAGGAIAERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S A+ M + + + I+ TD +++ SE+ QL +++
Sbjct: 64 ASRNANDGISLSQTAEGAMEEIGNNLQRIRELSVQSAKATNSSTDREALNSEVKQLTAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A +SFNG L + + + + I ++ V
Sbjct: 124 DRVANQTSFNGTKLLDGSFSGALFQVGADAGQTIGINSIADANIDSLGKANFAAAVSGAG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G + + T + A + T
Sbjct: 184 VSGTATASGSVSGISLSFKDASGSAKSITIADVKVAAGDTAADVNKKVASAINDKLDQTG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + V + + A + TS ++G+ S + I ++
Sbjct: 244 MYASIKSDGSVQIESLKAGQDFTSLSAGTSSAAGITVGAGITTASA-------------- 289
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ +LD + L + D +
Sbjct: 290 --------------ASGSTASTLGSLDISTFSGAQKALEIVDKALTTVNSSRADMGAVQK 335
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ + + +A+ R+ D D A +
Sbjct: 336 RFTSTIANLSATSENLSASRS----------------------------RIADTDYAKAT 367
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ L+ + +LSL +
Sbjct: 368 AELTRTQILQQAGTAMLAQAKSVPQNVLSLLQ 399
>gi|33590247|gb|AAQ22685.1| flagellin [Escherichia coli]
Length = 525
Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats.
Identities = 64/522 (12%), Positives = 135/522 (25%), Gaps = 72/522 (13%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMK-------- 54
I TN ++ L +L +R+SSGLR++ A D+AA +IA
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 55 --------------------------SDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
LS + S ++ + +++ + +
Sbjct: 64 ASRNANDGISVAQTTEGALSEINNNLQRIRELSVQATNGTNSDSDLNSIQDEITQRLSEI 123
Query: 89 STI---------KNKITAGVERGTDSKSIQSEITQLQSQLR------------------- 120
+ K + + + ++
Sbjct: 124 DRVSNQTQFNGVKVLASDQTMKIQVGANDGETTEIALDKIDAKTLGLDNFSVAPGKVPMS 183
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
S + + + + AK+ ++ D T T ++
Sbjct: 184 SAVALKSEAAPDLTKVNATDGSVGGAKAFGSNYKNADVETYFGTGNVQDTKDTTDATGTA 243
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + + + S + A F
Sbjct: 244 GTKVYQVQVEGQTYFVGQDNNTNTNGFTLLKQNSTGYEKVQVGGKDVQLANFGGRVTAFV 303
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ G AT + S + V + +
Sbjct: 304 EDNGSATSVDLAAGKMGKALAYNDAPMSVYFGGKNLDVHQVQDTQGNPVPNSFAAKTSDG 363
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE--- 357
+ A GNT D ++ + T + +
Sbjct: 364 TYIAVNVDAATGNTSVITDPNGKAVEWAVKNDGSAQAIMREDDKVYTANITNKTATKGAE 423
Query: 358 -------KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
LA +S +D + +G++ +R + + + R+
Sbjct: 424 LSASDLKALATTNPLSKLDEALAKVDKLRSSLGAVQNRFDSAITNLGNTVNNLSSARSRI 483
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
DAD A+E + +S Q QQ L+ N +T +LSL +G
Sbjct: 484 EDADYATEVSNMSRAQILQQAGTSVLAQANQTTQNVLSLLQG 525
>gi|87242358|gb|ABD33718.1| flagellin [Bacillus thuringiensis serovar finitimus]
Length = 422
Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats.
Identities = 64/422 (15%), Positives = 132/422 (31%), Gaps = 10/422 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L+ +D G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVAADNTQNGMSLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ ++ ++Q E +LQ Q+ IA + FN +N L+ D
Sbjct: 61 NSVSNILLRMRDIANQSANGTNTDSNKSALQKEFAELQKQITYIADNTQFNDKNLLKEDS 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
++ S I D V + + ++ L K
Sbjct: 121 EVKIQTLDSSKGEQQIGIDLKAVTLEKLGTNNISIGKADGTTEGTKADLTALQAAAKKLE 180
Query: 199 EPQVLKDIDVSVYDASGTI-------STKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
+P K+ G + K T + I
Sbjct: 181 KPDTGTMEKDVKDAKEEFDKVKASLSDEDVKKIEAAFGEFDKDKTNTTKASDIFNAIKDV 240
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
A AA ++ T D A +
Sbjct: 241 KLADKAAAAPAPADLTKFKAALDKLQTPNAGTMVDDVKDAKDEFEKIKGSLSDADAQKIQ 300
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ + + D + +T +K A ++ ID
Sbjct: 301 AAFEEFEKANTDDSKASAIYNLAKDVKVNATDTTTGTDKDTTTSTDKDAALAAIAAIDAA 360
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ +G+ +R+ + +K ++ ++ DADMA E + ++ + +
Sbjct: 361 LTKVADNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEA 420
Query: 432 AV 433
+
Sbjct: 421 GI 422
>gi|9843799|emb|CAC03724.1| flagellin [Pseudomonas mendocina]
Length = 440
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 47/440 (10%), Positives = 112/440 (25%), Gaps = 42/440 (9%)
Query: 46 YWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT-- 103
IA + S L + G S A+ + ++ ++ +++
Sbjct: 1 GLQIANRLTSQITGLGVATRNANDGISLAQTAEGALQQSTGILQRMRDLALQSANGSNGA 60
Query: 104 -DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
+ ++Q E+ QLQ +L I+ +SF G L GS + + + +
Sbjct: 61 IERSALQGEVAQLQQELNRISDTTSFGGRKILDGSFGSQSFQVGSNAYETISVSIGSAAT 120
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
+ + G + K D V + +
Sbjct: 121 DRIGINRVTTSGGAAQAIASGAAFSATSGSAYSSTSFNINSKLSDGDVAISGAASGSASE 180
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV--------- 273
+ + + + + S +
Sbjct: 181 VARAVNAKSDETGVTANSRTVATLGGITASGTVSFNLSGVTSKSKDSDAATVSAVVTDTT 240
Query: 274 ------------------------------AASATYIRMGNSDIWVRATTKNSITSDPGY 303
++ I++ N A+ +
Sbjct: 241 DLKSLADAINRETAKTGISAVSKGDTIELVSSRGDAIQITNYAGSGGASLQAKSFDGADD 300
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ D + + + G + NT + ++
Sbjct: 301 VGTASTIAEGGGARADGQVQLEAADAFQVTGMTGGLGSDGFSELDAVNTIDISTATGAQD 360
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ I+ I + ++G++ +R ++ + + R+ D D A+E++ L+
Sbjct: 361 ALGIINGAISNIDSQRAQLGAVQNRFENTISNLQNIAENSSAARSRIRDTDFAAETSELT 420
Query: 424 ALQTQQQLAVQALSIVNNST 443
Q QQ L+ N
Sbjct: 421 KNQILQQAGTAILAQANQLP 440
>gi|288962697|ref|YP_003452991.1| flagellin [Azospirillum sp. B510]
gi|288914963|dbj|BAI76447.1| flagellin [Azospirillum sp. B510]
Length = 414
Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats.
Identities = 120/451 (26%), Positives = 186/451 (41%), Gaps = 37/451 (8%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SILTN SAM+A Q LR + +L QDR+S+GL+V++A DNAAYWSIA MK+D
Sbjct: 1 MASILTNASAMTALQTLRHVTGDLATTQDRISTGLKVNNAKDNAAYWSIATTMKADVAGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV +++ LGS + A ++ + T+K ++ AG G D IQ+++ QL ++
Sbjct: 61 KAVKESLELGSGTTNTASVAAKNIVENLQTLKARVIAGQTNGVDKSLIQNDVDQLVKLIK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A +SFNG+N LR + + ++ + G + + + ++S
Sbjct: 121 GAAADASFNGDNLLRVTYSNDGTAKDQN-VSILASLSRGNGTVDPSYIDFQRQDLRVESI 179
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
++ + K + + + L T K +
Sbjct: 180 VGKATIEQQINSTNAKKASVDIKFGAPGDTFINGQNLGLGALSLTVTKEDGTKVDVSVDL 239
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A+ T A T+ T+ VA + + + D
Sbjct: 240 SAQKYDTNLATTQGNIATAVNTALTAAGGDFQVAFTGDTLSFTDQD-------------- 285
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
D S + A+ +
Sbjct: 286 ----------------------KNADGNFTAQVSGLWVGSKESDAFGGLADLTQVDVVNN 323
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ + I+ + A A IGSI +R+ +Q DF+ + D++ KG+G LVDADM ES+
Sbjct: 324 SKKSLEVINKLLDTAIGKASVIGSIENRVSVQNDFVSKLTDSMNKGIGALVDADMNEESS 383
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQ QQQLA QALSI N ILSLFR
Sbjct: 384 RLQALQVQQQLATQALSIANQGPQNILSLFR 414
>gi|300925017|ref|ZP_07140939.1| bacterial flagellin [Escherichia coli MS 182-1]
gi|300418820|gb|EFK02131.1| bacterial flagellin [Escherichia coli MS 182-1]
Length = 524
Score = 151 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 65/521 (12%), Positives = 136/521 (26%), Gaps = 72/521 (13%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKS------- 55
I TN ++ L +L +R+SSGLR++ A D+AA +IA +
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 56 ---------------------------DNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
LS + S ++ + +++ + +
Sbjct: 64 ASRNANDGISVAQTTEGALSEINNNLQRIRELSVQATNGTNSDSDLNSIQDEITQRLSEI 123
Query: 89 STI---------KNKITAGVERGTDSKSIQSEITQLQSQLR------------------- 120
+ K + + + I ++
Sbjct: 124 DRVSNQTQFNGVKVLASDQTMKIQVGANDGETIEIALDKIDAKTLGLDNFSVAPGKVPMS 183
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
S + + + + AK+ ++ D T T ++
Sbjct: 184 SAVALKSEAAPDLTKVNATDGSVGGAKAFGSNYKNADVETYFGTGNVQDTKDTTDATGTA 243
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + + + S + A F
Sbjct: 244 GTKVYQVQVEGQTYFVGQDNNTNTNGFTLLKQNSTGYEKVQVGGKDVQLANFGGRVTAFV 303
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ G AT + S + V + +
Sbjct: 304 EDNGSATSVDLAAGKMGKALAYNDAPMSVYFGGKNLDVHQVQDTQGNPVPNSFAAKTSDG 363
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE--- 357
+ A GNT D ++ + T + +
Sbjct: 364 TYIAVNVDAATGNTSVITDPNGKAVEWAVKNDGSAQAIMREDDKVYTANITNKTATKGAE 423
Query: 358 -------KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
LA +S +D + +G++ +R + + + R+
Sbjct: 424 LSASDLKALATTNPLSKLDEALAKVDKLRSSLGAVQNRFDSAITNLGNTVNNLSSARSRI 483
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DAD A+E + +S Q QQ L+ N +T +LSL R
Sbjct: 484 EDADYATEVSNMSRAQILQQAGTSVLAQANQTTQNVLSLLR 524
>gi|56478002|ref|YP_159591.1| flagellin and related hook-associated protein [Aromatoleum
aromaticum EbN1]
gi|56314045|emb|CAI08690.1| Flagellin and related hook-associated protein [Aromatoleum
aromaticum EbN1]
Length = 306
Score = 151 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ ++++A + L +L R+SSGLR++ A D+AA +I++ M + L+
Sbjct: 5 INTDFASLNAQRNLTASQGSLATSLQRLSSGLRINSAKDDAAGLAISERMTAQVRGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ + + + + I+ D +++Q E+ QL+SQ+
Sbjct: 65 ARNANDGISLAQTAEGALGEIGNKLQRIRELAVQSRNGTNSAEDREALQKEVAQLKSQID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
A +SFNG + + + +
Sbjct: 125 RAANHTSFNGTKLIDSSFENQDFQVGA 151
>gi|289666057|ref|ZP_06487638.1| flagellin [Xanthomonas campestris pv. vasculorum NCPPB702]
gi|289670519|ref|ZP_06491594.1| flagellin [Xanthomonas campestris pv. musacearum NCPPB4381]
Length = 399
Score = 151 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 62/452 (13%), Positives = 130/452 (28%), Gaps = 59/452 (13%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + +L + ++SSG R++ A +AA +IA+ + L
Sbjct: 4 VINTNVMSLNAQRNLNTNSSSLALSIQQLSSGKRITSFAVDAAGGAIAERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S A+ M + + + I+ TD +++ SE+ QL S++
Sbjct: 64 ASRNANDGISLSQTAEGAMQEIGNNLQRIRELSVQSSNATNSSTDREALNSEVKQLTSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A +SFNG L + + + I T+ V
Sbjct: 124 DRVANQTSFNGTKLLDGSFSGALFQVGADAGQTIGIKSIADANIDTLGRANFAAAVSGAG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T G + +
Sbjct: 184 VTGTATASGSVSGISLSFND---------------------------------------- 203
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + G + + A+ I + A+ K +
Sbjct: 204 ---------ASGSAKSITIADVKVGAGDTAADVNKRVASAINDKLDQTGMYASIKTDGSL 254
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + T+ + + N+ + A
Sbjct: 255 QIESLKAGQDFTSLSAGTSSAAGITVGAGITTASAASGSTASTLGNLDISTFSGAQQALE 314
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+++ ++ +++ A + S + + + + R+ D D A +
Sbjct: 315 IVDKALTTVNSSRADMGAVQNRFTSTIANLSATSENLS-------ASRSRIADTDYAKTT 367
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ L+ +LSL +
Sbjct: 368 AELTRTQILQQAGTAMLAQAKTVPNNVLSLLQ 399
>gi|295678110|ref|YP_003606634.1| flagellin domain protein [Burkholderia sp. CCGE1002]
gi|295437953|gb|ADG17123.1| flagellin domain protein [Burkholderia sp. CCGE1002]
Length = 405
Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats.
Identities = 76/454 (16%), Positives = 150/454 (33%), Gaps = 52/454 (11%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++ + Q L L R+SSG R++ AAD+AA +I+ IM++ L
Sbjct: 1 MLGINTNINSLVSQQNLTGSGSALSQAITRLSSGKRINSAADDAAGLAISNIMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G+S V A +G++ + I+ T D ++Q E++Q S
Sbjct: 61 NQGVSNSNDGTSMVQTASSGLASLTSSLQRIRQLATQAANGSMTSDDRAALQKEVSQQIS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ I+ +++NG N L LG+ T + +V S + + + L
Sbjct: 121 EVNRISSQTTYNGMNLLNGSLGTVTFQVGANVGQSISLNLTQDMSAAKLGTGNVQVGNTL 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
S D + +
Sbjct: 181 GSFGDLSLNNSGQTVATGATIT-------------------------------------- 202
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ + A T + + + A+A + + T +
Sbjct: 203 -----------SINVLADGKGGYTLTDQNNQALSATTATAVLSGVTITADANGNATITAA 251
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ A + V + TL + +G ++ LN+ + + +
Sbjct: 252 NATGAGAAIATALKTDMTTTVGGSTATLTTSFTAASNTATGATIDALNVPTNVASIDVSS 311
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ + ID + +G+ +R + + + DA+ A+
Sbjct: 312 QTGASAAMESIDNALTTLNNLQATLGAAQNRFSAIGSTQQAQSTDLSSAQSSIQDANFAA 371
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ LS Q QQ + L+ N+ +IL L +
Sbjct: 372 ETANLSKAQVLQQAGISVLAQANSQPQQILKLLQ 405
>gi|46093567|dbj|BAD14980.1| flagellin [Escherichia coli]
Length = 524
Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats.
Identities = 65/521 (12%), Positives = 136/521 (26%), Gaps = 72/521 (13%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKS------- 55
I TN ++ L +L +R+SSGLR++ A D+AA +IA +
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 56 ---------------------------DNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
LS + S ++ + +++ + +
Sbjct: 64 ASRNANDGISVAQTTEGALSEINNNLQRIRELSVQATNGTNSDSDLNSIQDEITQRLSEI 123
Query: 89 STI---------KNKITAGVERGTDSKSIQSEITQLQSQLR------------------- 120
+ K + + + I ++
Sbjct: 124 DRVSNQTQFNGVKVLASDQTMKIQVGANDGETIEIALDKIDAKTLGLDNFSVAPGKVPMS 183
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
S + + + + AK+ ++ D T T ++
Sbjct: 184 SAVALKSEAAPDLTKVNATDGSVGGAKAFGSNYKNADVETYFGTGNVQDTKDTTDATGTA 243
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + + + S + A F
Sbjct: 244 GTKVYQVQVEGQTYFVGQDNNTNTNGFTLLKQNSTGYEKVQVGGKDVQLANFGGRVTAFV 303
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ G AT + S + V + +
Sbjct: 304 EDNGSATSVDLAAGKMGKALAYNDAPMSVYFGGKNLDVHQVQDTQGNPVPNSFAAKTSDG 363
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE--- 357
+ A GNT D ++ + T + +
Sbjct: 364 TYIAVNVDAATGNTSVITDPNGKAVEWAVKNDGSAQAIMREDDKVYTANITNKTATKGAE 423
Query: 358 -------KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
LA +S +D + +G++ +R + + + R+
Sbjct: 424 LSASDLKALATTNPLSALDEALAKVDKLRSSLGAVQNRFDSAITNLGNTVNNLSSARSRI 483
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DAD A+E + +S Q QQ L+ N +T +LSL R
Sbjct: 484 EDADYATEVSNMSRAQILQQAGTSVLAQANQTTQNVLSLLR 524
>gi|260432287|ref|ZP_05786258.1| flagellin protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260416115|gb|EEX09374.1| flagellin protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 418
Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats.
Identities = 103/451 (22%), Positives = 169/451 (37%), Gaps = 36/451 (7%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ +N NL Q+ +S+G V+ A DN+A W+I+++M+SD
Sbjct: 4 MSSILTNNGAMVALQTLKSVNKNLANTQNAISTGKDVATAKDNSAVWAISKVMESDVNGF 63
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+A+ D++ LG S V +A+ D+++ +K+KI A E D I ++T L+ Q+
Sbjct: 64 NAIKDSLALGESTVAVARNASETVTDLLTQMKSKIVAAQEDNVDRSKINDDVTALRDQIA 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + FNG N + ++ + + + + + +
Sbjct: 124 SVVGAAQFNGLNLVDGSASGASILASLDRDSTGSVTASSITVNGQNLSTGGYASKGVLAG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+D K ID S +
Sbjct: 184 SDNATTDNDAAGFTMDKAGGTGDIVIDSSTDNF--------------------------- 216
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ ++ + S TY I
Sbjct: 217 ---------AAGDKVTITIGDKVASYTVQAGDLDPSGTYDSAYTDAIVAVGLKNQIDALG 267
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T + + D + + ++ ++ +
Sbjct: 268 ITGVAIDYDSSAPGTLTFVTGTAAAGADADRDVTVSAQFTNAGSGGLGALSSIDVSTSAG 327
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ I+T I A A+ GS RI Q++FI + D+ + G+G LVDADM S
Sbjct: 328 AAAALGTIETLIDTAIDASAAFGSAQGRIETQKEFISNLTDSFKSGIGSLVDADMEETSA 387
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQ QQQLA Q+LSI N + ILSLFR
Sbjct: 388 RLQALQVQQQLATQSLSIANQAPQTILSLFR 418
>gi|240137251|ref|YP_002961720.1| putative flagellin (flaA-like; flaB-like) [Methylobacterium
extorquens AM1]
gi|240007217|gb|ACS38443.1| putative flagellin (flaA-like; flaB-like) [Methylobacterium
extorquens AM1]
Length = 452
Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats.
Identities = 114/452 (25%), Positives = 194/452 (42%), Gaps = 11/452 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M+A L+ IN L++ +RVS+G RVS A+DNAAYWSIA +++DN +LSAV D++GLG
Sbjct: 1 MTALTTLKGINQQLDMTSNRVSTGQRVSSASDNAAYWSIATAVRTDNASLSAVKDSLGLG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
SS VD A G++ + + ++ K+ ++ G D +Q+EI +Q+++ A S +G
Sbjct: 61 SSAVDTAYNGLNSILTDLQNMRAKLQTAMQPGVDRAKVQTEIDAIQNKMSSTAASSVSSG 120
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+NWL + ++ ++V+ F RD +G V + + + + +S+ +
Sbjct: 121 QNWLSVNSADASYLKDRNVVAGFSRDSSGTVNFSYVTVNVSNIKLYDANSSTSVDVPATS 180
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
+ + + GT + A A
Sbjct: 181 AQVFATQSLTSMAAFRPAGAAAVKGTADFSGAQTIDLLIKTETATAGVAITLNKAALTAA 240
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASAT-----------YIRMGNSDIWVRATTKNSITS 299
A + ++ S A ++ + T+
Sbjct: 241 VKDTAKVTTSELIDALNNQIASTALKGEVTASLDSTGRLTFTRVDTGAGNTVAVDSVTTN 300
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ K G D +T+ D + ++ + N
Sbjct: 301 TVDIGFGSGVKAGVVAKGADATTTSGRGILDSQAGSYTAGGAYSIADFDISTLVGTNGDA 360
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ +++ +D I T A K+G+ ++I Q F+ + A + +G LVDAD+ ES
Sbjct: 361 DLSAIITAVDKAIAKVTDAGTKLGASKTQIDGQSSFVDTLMKANNRTIGTLVDADIEEES 420
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
T+L ALQTQQQLAVQALSI N+ + +LSLFR
Sbjct: 421 TKLKALQTQQQLAVQALSIANSGSQNVLSLFR 452
>gi|50082715|gb|AAT70055.1| flagellin [Pectinatus frisingensis]
Length = 427
Score = 150 bits (377), Expect = 5e-34, Method: Composition-based stats.
Identities = 64/431 (14%), Positives = 138/431 (32%), Gaps = 4/431 (0%)
Query: 9 SAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
SA++ + N NL +VSSG +++ AAD+ A ++I+Q M++ +L+ ++
Sbjct: 1 SALNTLNIMSKNNKNLASSLQKVSSGQKINSAADDPAGYAISQRMQTQIRSLNQDNNNAA 60
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSF 128
G + + A+ +S +D++ T+K K+ + + L + I ++
Sbjct: 61 NGQNMLKTAEGAVSSTVDILKTLKEKVLDAANDTNTTYDRNTIQDYLDQAVDQINDNATT 120
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
L D + A +V S D+ T + D + L+ T
Sbjct: 121 TYNGKLLVDGSMNQKGNATTVAYSNASLDSSTTFSTQLTALKDRNGLSLNILKQDTVTVS 180
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
+ + V ++ +G + +
Sbjct: 181 YVTNGKIMTTSFTVGTSTLSDIFTKAGQAAGANISGMGNGVTLKTGNENSVIGVNAQGVT 240
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
+ T+S + S + + + GN V S
Sbjct: 241 MHTADGSSVLTVTSSKSGVSGNIAGFTISITGTDGNVKKSVDTKLDAWDEQINAQDKSND 300
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ ++ + L + ++ + + V+ +
Sbjct: 301 NSITLQVGTKANQTIRVG----LGDMRAQALGLQGVSGDGSVQNLDVSTRANANAAVNVL 356
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D ++ A +IGS+ SR+ +D + V+ + DA+MA E T +
Sbjct: 357 DNAVQKALKEQTQIGSVESRLDYTQDNLTTASQNVQASESTITDANMAQEMTEYTKNNIL 416
Query: 429 QQLAVQALSIV 439
Q + L+
Sbjct: 417 MQASQAMLAQA 427
>gi|126215004|emb|CAM35537.1| flagellin [Pseudomonas fluorescens]
Length = 449
Score = 150 bits (377), Expect = 5e-34, Method: Composition-based stats.
Identities = 64/446 (14%), Positives = 122/446 (27%), Gaps = 37/446 (8%)
Query: 23 NLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82
L R+SSGLR++ A D+AA IA + S L + G S A+ M
Sbjct: 4 ALATSMQRLSSGLRINSAKDDAAGLQIANRLTSQINGLGQAVKNVNDGISIAQTAEGAMQ 63
Query: 83 KAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
+ D++ ++ + D KS E L S+L I++ ++F G+ L G
Sbjct: 64 ASTDILQKMRTLALSSATGSLSADDRKSNNDEYQALTSELTRISQTTTFGGQKLLDGSYG 123
Query: 140 SSTASIAKSVIGSFI-------RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ + + + ++ G QI ++ + + T G +
Sbjct: 124 TKAIQVGANANETINLSLENVAANNIGSQQIKSVAITPSATGIGSAAGTITVTGNGQVSS 183
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ V G +T ++ A A T+
Sbjct: 184 PIAVPVGASAQSIASKMNGAIGGLTATASTEVQLDVDAAAFTGATPAAAATFSMTVNGQT 243
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+ KS + + + + +
Sbjct: 244 VTMTGVTSQAGLADQLKSNAAKLGISVNFDESKKTLSVKSDTGENIEFGAVAAGATSAAA 303
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN--------------------- 351
T D + L + +
Sbjct: 304 ITMKAKDGSGAFAATGTALSDTTAMIATGQVSLDSSKGYSLSGAGVGGLFGAAAATTAAS 363
Query: 352 ------TDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ +S ID I + +G+ +R+ D ++ ++
Sbjct: 364 TKTTIANTDVTSADMAQNALSVIDKAIGTIDSVRSGLGATQNRLTTTADNLQNIQKNSTA 423
Query: 406 GVGRLVDADMASESTRLSALQTQQQL 431
+ D D ASE+ L+ QT Q
Sbjct: 424 ARSTVQDVDFASETAELTKQQTLQSA 449
>gi|325927967|ref|ZP_08189188.1| flagellin/flagellar hook associated protein [Xanthomonas perforans
91-118]
gi|325541652|gb|EGD13173.1| flagellin/flagellar hook associated protein [Xanthomonas perforans
91-118]
Length = 399
Score = 150 bits (377), Expect = 5e-34, Method: Composition-based stats.
Identities = 64/452 (14%), Positives = 132/452 (29%), Gaps = 59/452 (13%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + +L + ++SSG R++ A +AA +IA+ + L
Sbjct: 4 VINTNVMSLNAQRNLNTNSSSLALSIQQLSSGKRITSFAVDAAGGAIAERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S A+ M + + + I+ TD +++ SE+ QL +++
Sbjct: 64 ASRNANDGISLSQTAEGAMEEIGNNLQRIRELSVQSANATNSSTDREALNSEVKQLTAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A +SFNG L + + + + I ++ V
Sbjct: 124 DRVANQTSFNGTKLLDGSFSGALFQVGADAGQTIGINSIADANIDSLGKANFAAAVSGAG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G + + T + A + T
Sbjct: 184 VSGTATASGSVSGISLSFKDASGSAKSITIADVKVAAGDTAADVNKKVASAINDKLDQTG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + V + + A + TS ++G+ S + I ++
Sbjct: 244 MYASIKSDGSVQIESLKAGQDFTSLSAGTSSAAGITVGAGITTASA-------------- 289
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ +LD + L + D +
Sbjct: 290 --------------ASGSTASTLGSLDISTFSGAQKALEIVDKALTTVNSSRADMGAVQK 335
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ + + +A+ R+ D D +
Sbjct: 336 RFTSTIANLSATSENLSASRS----------------------------RIADTDYPKAT 367
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ L+ + +LSL +
Sbjct: 368 AELTRTQILQQAGTAMLAQAKSVPQNVLSLLQ 399
>gi|116563843|gb|ABJ99934.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Saintpaul]
gi|116563845|gb|ABJ99935.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Saintpaul]
Length = 447
Score = 150 bits (377), Expect = 6e-34, Method: Composition-based stats.
Identities = 66/447 (14%), Positives = 133/447 (29%), Gaps = 50/447 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSF--------------------------------IRDDNGKVQITTIDYYLDPET 174
+G +T D
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKAYDVSATAAMDPKSFTDGTKNLTAPDATAIKAA 180
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ ++T + L ++ K D + + ++ A T A
Sbjct: 181 LGNPAATGDSLSATLSFKDGKYYATVAGYTDAADTSKNGKYEVNVDSATGAVTFNAAPTK 240
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A T D + P+ + S + + AA + + +
Sbjct: 241 ATVTGDTTVTKVQVNAPVAVSTDVKKALEDGGVSNADATAAKLVKMSYTDKNGKSIDGGY 300
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK---------------EIDSGY 339
Y + G V T + + + K
Sbjct: 301 ALEAGGKYYAATYDEGTGKITANVTTYTDSTGATKTAANQLGGVDGKTEVVTIDGKTYNA 360
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
S + + A E ++ ID + A +G++ +R + +
Sbjct: 361 SKAAGHDFKAQPELAEAAAKTTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITNLGNT 420
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQ 426
+ + + R+ D+D A+E + +S Q
Sbjct: 421 VNNLSEARSRIEDSDYATEVSNMSRAQ 447
>gi|116563743|gb|ABJ99884.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Chester]
gi|116563751|gb|ABJ99888.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Chester]
Length = 447
Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats.
Identities = 65/447 (14%), Positives = 133/447 (29%), Gaps = 50/447 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSF--------------------------------IRDDNGKVQITTIDYYLDPET 174
+G +T D
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKAYDVSATDAMDPKSFTDGTKNLTAPDATAIKAA 180
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ ++T + L ++ K + + + ++ A T A
Sbjct: 181 LGNPTATGDSLSATLSFKDGKYYATVAGYTNAADTSKNGKYEVNVDSATGAVTFNAAPTK 240
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A T D + P+ + S + + AA + + +
Sbjct: 241 ATVTGDTTVTKVQVNAPVAVSTDVKKALEDGGVSNADATAAKLVKMSYTDKNGKSIDGGY 300
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK---------------EIDSGY 339
Y + G V T + + + K
Sbjct: 301 ALEAGGKYYAATYDEGTGKITANVTTYTDSTGATKTAANQLGGVDGKTEVVTIDGKTYNA 360
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
S + + A E ++ ID + A +G++ +R + +
Sbjct: 361 SKAAGHDFKAQPELAEAAAKTTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITNLGNT 420
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQ 426
+ + + R+ D+D A+E + +S Q
Sbjct: 421 VNNLSEARSRIEDSDYATEVSNMSRAQ 447
>gi|254510809|ref|ZP_05122876.1| flagellin protein [Rhodobacteraceae bacterium KLH11]
gi|221534520|gb|EEE37508.1| flagellin protein [Rhodobacteraceae bacterium KLH11]
Length = 405
Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats.
Identities = 101/451 (22%), Positives = 165/451 (36%), Gaps = 46/451 (10%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ +N NL + Q+ +S+G V+ A DN+A W+I+++M+SD
Sbjct: 1 MSSILTNNGAMVALQTLKSVNKNLAMTQNAISTGKDVATAKDNSAVWAISKVMESDVKGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+A+ D++ LG S V +A+ D+++ +K KI A E D I ++++ L+ Q+
Sbjct: 61 NAIKDSLALGESTVAVARNASETVTDLLNQMKGKIVAAQEDNVDRGKINADVSALRDQIT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + FNG N + G++ S + + V + + +
Sbjct: 121 SVVGAAQFNGLNLVNGGAGATVLSSLDRDNAGNVTASSINVAAQNLSTGGYTAADVFTGT 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T V + A
Sbjct: 181 DGVTADTADAFGFSLDGNGGSDDVGSIVIADPGTLAAGDTFTVRLGDDVASYTVRAEDIA 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
I + + + + S AA G++ + +
Sbjct: 241 AGNAPEEIIAAGLKSAIEASDANVSVAYDPGSNAAQLDITNEGSNSLQISGQFA------ 294
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ +
Sbjct: 295 ----------------------------------------NANSGGLGALASIDVSTDAG 314
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ I++ I A A+ GS RI Q++FI + D+ + G+G LVDADM S
Sbjct: 315 ATAALGAIESLIDTAIDASAAFGSAQGRIETQKEFISNLSDSFKSGIGSLVDADMEETSA 374
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQ QQQLA Q+LSI N + ILSLFR
Sbjct: 375 RLQALQVQQQLATQSLSIANQAPQSILSLFR 405
>gi|116563831|gb|ABJ99928.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Hadar]
Length = 444
Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats.
Identities = 69/444 (15%), Positives = 121/444 (27%), Gaps = 47/444 (10%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ + G S +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQAARNANDGISIAQTTGCALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQ---------ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
I Q D T LD T G L
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKKYDVDSTGVTQSLDLKTAGITGATLKAGITGTT 180
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
E +KD V S + TT A A G ++
Sbjct: 181 TETGSVKDGKVYYDADSKNYYVEVDFTDTTDKAAHAGFYKADVDADGNVSLATGATKEAK 240
Query: 258 APN-----------------------------------TTSGTSGSKSPSVAASATYIRM 282
N T + +
Sbjct: 241 PTNAVEVEKTIDEKPLKASSSVQDALKASGIADAVAEAATVVKMSYTDKNGKTIDGGYGI 300
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
D + AT + + T+ T + S
Sbjct: 301 KVGDDYYAATKEKDGSYSINSTSYTDKDGNTKTALNQLGGADGKTEVVSIDGKTYNASKA 360
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + A E + ID + A +G++ +R + + +
Sbjct: 361 AGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVNN 420
Query: 403 VEKGVGRLVDADMASESTRLSALQ 426
+ R+ D+D A+E + +S Q
Sbjct: 421 LSSARSRIEDSDYATEVSNMSRAQ 444
>gi|148910961|gb|ABR18539.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Kottbus]
Length = 465
Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats.
Identities = 63/465 (13%), Positives = 121/465 (26%), Gaps = 58/465 (12%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
+R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ +
Sbjct: 1 IERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNN 60
Query: 88 MSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ ++ SIQ+EITQ +++ ++ + FNG L D +
Sbjct: 61 LQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQV 120
Query: 145 IAKSVIGSFIR------------------------------------------------D 156
A I D
Sbjct: 121 GANDGETIDIDLKQINSQTLGLDSLNDSLNVQKAYDVKDTAVTTKAYADNGTTLDASGLD 180
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
D T +Y + + D T
Sbjct: 181 DAAIKTAIGGTTGTAAVTGGTVKFDADNNKYFVTIGGFTGADAAKNGDYEVNVATDGKVT 240
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ T K +GA K + + +T + +
Sbjct: 241 LDTGATKTTMPAGAATKTEVQELKDTPAVVSADAKNALIAGCVDTADANAATLVKMSYTD 300
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + D T T++ K
Sbjct: 301 KNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTTKTAANQLGGVDGKTEV 360
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA-------AGKIGSISSRI 389
T ++ A D + E + + AA +G++ +R
Sbjct: 361 VTIDGKTYKASKAAGHDFKAQPELAEAAAKTTENPLPKIDAALAQVDALRSDLGAVQNRF 420
Query: 390 HLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ + + + + R+ D+D A+E + +S Q QQ
Sbjct: 421 NSAISNLGNSVNNLFEARSRIEDSDYATEVSHMSRAQILQQAGTS 465
>gi|58426798|gb|AAW75835.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 422
Score = 149 bits (375), Expect = 9e-34, Method: Composition-based stats.
Identities = 68/452 (15%), Positives = 137/452 (30%), Gaps = 59/452 (13%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + +L + ++SSG R++ + +AA +IA+ + L
Sbjct: 27 VINTNVMSLNAQRNLNTNSSSLALSIQQLSSGKRITSFSVDAAGGAIAERFTTQIRGLDV 86
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S A+ M + + + I+ TD +++ SE+ QL S++
Sbjct: 87 ASRNANDGISLSQTAEGAMQEIGNNLQRIRELSVQSANATNSSTDREALNSEVKQLTSEI 146
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A +SFNG L + +
Sbjct: 147 DRVANQTSFNGTKLLDGSFSGALFQVGA-------------------------------- 174
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ ++ ++ + +V A + + + K A+ +
Sbjct: 175 ---DAGQTIGINSIADANIDTLGKANFAAAVSAAGVSGTATASGSVSGISLSFKDASGSA 231
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + K A+ G+ I ++ +
Sbjct: 232 KSITIADVKVGAGDTAADVNKKVASAINDKLDQTGMYASIKSDGSVQIESLKAGQDFTSL 291
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G +++ VG S + S + L I A T + +
Sbjct: 292 SAGTSSAAGITVGAGITTASAASGSTASTLGSLDISTFSGAQQALEIVDKALTTVNSSRA 351
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
M + + + I +A + + + SRI D A +
Sbjct: 352 DMGAVQNRFTSTIANLSATSENLSASRSRIADT---------------------DYAKST 390
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ L+ + +LSL +
Sbjct: 391 AELTRTQILQQAGTAMLAQAKSVPQNVLSLLQ 422
>gi|116563779|gb|ABJ99902.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Kottbus]
gi|116563781|gb|ABJ99903.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Kottbus]
gi|116563811|gb|ABJ99918.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Kottbus]
gi|116563817|gb|ABJ99921.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Kottbus]
gi|116563825|gb|ABJ99925.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Saintpaul]
gi|116563837|gb|ABJ99931.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Kottbus]
gi|116563841|gb|ABJ99933.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Kottbus]
Length = 447
Score = 149 bits (375), Expect = 9e-34, Method: Composition-based stats.
Identities = 65/447 (14%), Positives = 133/447 (29%), Gaps = 50/447 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSF--------------------------------IRDDNGKVQITTIDYYLDPET 174
+G +T D
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKAYDVSATAAMDPKSFTDGTKNLTAPDATAIKAA 180
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ ++T + L ++ K + + + ++ A T A
Sbjct: 181 LGNPAATGDSLSATLSFKDGKYYATVAGYTNAADTSKNGKYEVNVDSATGAVTFNAAPTK 240
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A T D + P+ + S + + AA + + +
Sbjct: 241 ATVTGDTTVTKVQVNAPVAVSTDVKKALEDGGVSNADATAAKLVKMSYTDKNGKSIDGGY 300
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK---------------EIDSGY 339
Y + G V T + + + K
Sbjct: 301 ALEAGGKYYAATYDEGTGKITANVTTYTDSTGATKTAANQLGGVDGKTEVVTIDGKTYNA 360
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
S + + A E ++ ID + A +G++ +R + +
Sbjct: 361 SKAAGHDFKAQPELAEAAAKTTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITNLGNT 420
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQ 426
+ + + R+ D+D A+E + +S Q
Sbjct: 421 VNNLSEARSRIEDSDYATEVSNMSRAQ 447
>gi|116563759|gb|ABJ99892.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Agama]
Length = 447
Score = 149 bits (375), Expect = 9e-34, Method: Composition-based stats.
Identities = 65/447 (14%), Positives = 133/447 (29%), Gaps = 50/447 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSF--------------------------------IRDDNGKVQITTIDYYLDPET 174
+G +T D
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKAYDVSATDAMDPKSFTDGTKNLTAPDATAIKAA 180
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ ++T + L ++ K + + + ++ A T A
Sbjct: 181 LGNPTATGDSLSATLSFKDGKYYATVAGNTNAADTSKNGKYEVNVDSATGAVTFNAAPTK 240
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A T D + P+ + S + + AA + + +
Sbjct: 241 ATVTGDTTVTKVQVNAPVAVSTDVKKALEDGGVSNADATAAKLVKMSYTDKNGKSIDGGY 300
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK---------------EIDSGY 339
Y + G V T + + + K
Sbjct: 301 ALEAGGKYYAATYDEGTGKITANVTTYTDSTGATKTAANQLGGVDGKTEVVTIDGKTYNA 360
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
S + + A E ++ ID + A +G++ +R + +
Sbjct: 361 SKAAGHDFKAQPELAEAAAKTTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITNLGNT 420
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQ 426
+ + + R+ D+D A+E + +S Q
Sbjct: 421 VNNLSEARSRIEDSDYATEVSNMSRAQ 447
>gi|71281535|ref|YP_268230.1| flagellin [Colwellia psychrerythraea 34H]
gi|71147275|gb|AAZ27748.1| flagellin [Colwellia psychrerythraea 34H]
Length = 517
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 78/515 (15%), Positives = 144/515 (27%), Gaps = 64/515 (12%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S++TN S+++A + L L+ +R+SSG+R++ A D+AA IA + S L+
Sbjct: 3 LSVVTNTSSLNAQRNLSKSGAGLQQSMERLSSGMRINSAKDDAAGLQIANRLTSQINGLA 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S A+ M + D++ ++ D +++Q E++ LQ +
Sbjct: 63 VAQRNANDGISMAQTAEGAMQASTDILQRMRELALQSANGSNSTEDREAMQKEVSALQDE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I+ +SF G+ L G+ + + + N +
Sbjct: 123 LTRISDTTSFGGQKLLNGTFGTKNFQVGANANETISLTMNSTAAADIGSDNSAVTGAISF 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ G + + +V + + +T
Sbjct: 183 TGFGGAIDATAGTAGLTGESLDVAVNGTTTTVALTDDMSAADLATSLNSVSGLSGVTAST 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
A + G S A T + + T + T
Sbjct: 243 EALINITAMGDTADTVTLSIDGNDIGAYTFDGGSTAQDETDLAAMINTDANMVTAGITAT 302
Query: 299 SDPGYT-------------------NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGY 339
+ +ST T D+ T + ++
Sbjct: 303 VNANNEISIVKADGSELSIEVTDITSSTANVTSITIDAADSAGTNAATGTVTATANNTSA 362
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG---------------- 383
S+ IT + A + + T +AAA +
Sbjct: 363 SVAAQFITGTVDFSAATVEGDTASLTIGTTTGNTTVSAAASTLAIGASTFSSVEGIDLST 422
Query: 384 -----SISSRIHLQEDFIKLMRDAV---------------------EKGVGRLVDADMAS 417
S + I I R + R+ D D A
Sbjct: 423 EDGSQSAINVIDGALAAIDNQRAGLGAVQNRFGHTISNLANIQENVSASRSRIQDTDFAV 482
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
E+ ++ Q QQ L+ N +SL G
Sbjct: 483 ETAVMTKNQILQQAGTSILAQANQIPQAAISLIGG 517
>gi|86211124|gb|ABC87259.1| flagellin [Xanthomonas campestris pv. campestris]
Length = 399
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 53/449 (11%), Positives = 119/449 (26%), Gaps = 53/449 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + ++ + ++SSG R++ A+ +AA +I++ + L
Sbjct: 4 VINTNVMSLNAQRNLNTNSSSMALSIQQLSSGKRITSASVDAAGLAISERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
S G + +A+ +++ G + S
Sbjct: 64 ASRNANDG---ISLAQTAEGAVVEI----------GNNLQRIRELSVQSANATNSATDRE 110
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A S + + T+ ++ +V V + +
Sbjct: 111 ALNSEVKQLTSEIDRVANQTSFNGTKLLNGDFSGALFQVGADAGQTIGINSIVDANVDSL 170
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
G + + + K A ++
Sbjct: 171 GKANFAASVSGAGVTGTATASGSLSGITLAFKDASGAAKSVAVADIKIASGDTAADINKK 230
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
A A TSG +S T + G S T
Sbjct: 231 VASAINDKLDQTGMYASIDTSGNVKLESLKAGQDFTSLSGGTSGAAGITAGAGIQT---- 286
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
S + + ++ + +
Sbjct: 287 ------------------------------------ASAASGSTASTLSSLDISTFSGAQ 310
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ + +D + ++ +G++ +R + + + R+ D D A + L
Sbjct: 311 KALEIVDKALTSVNSSRADMGAVQNRFTSTIANLAATSENLTASRSRIADTDYAKTTAEL 370
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q QQ L+ + +LSL +
Sbjct: 371 TRTQILQQAGTAMLAQAKSVPQNVLSLLQ 399
>gi|16903564|gb|AAL30512.1|AF425736_1 phase-2 flagellin [Salmonella enterica subsp. enterica serovar
Hadar]
Length = 450
Score = 149 bits (374), Expect = 1e-33, Method: Composition-based stats.
Identities = 64/450 (14%), Positives = 128/450 (28%), Gaps = 49/450 (10%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
L L +R+SSGLR++ A D+AA +IA ++ L+ S G S
Sbjct: 1 NNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIA 60
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGE 131
+ +++ + + ++ SIQ+EITQ +++ ++ + FNG
Sbjct: 61 QTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGV 120
Query: 132 NWLRTDLGSSTASIAKSVIGSF-------------------------------IRDDNGK 160
L D + A +G
Sbjct: 121 KVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVSATDVISSTYSDGT 180
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+T + + T T + ++ K D + + ++
Sbjct: 181 QALTAPTATDIKAALGNPTVTGDTLTAAVSFKDGKYYATVSGYTDAGDTAKNGKYEVTVD 240
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
A + GA + T D A + P+ A A S + + AA+ +
Sbjct: 241 SATGAVSFGATPTKSTVTGDTAVTKVQVNAPVAADAATKKALQDGGVSSADASAATLVKM 300
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK------- 333
+ + D Y G + + + K
Sbjct: 301 SYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTTKTAANQLGGVDG 360
Query: 334 --------EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
S + + A E + ID + A +G++
Sbjct: 361 KTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDALRSDLGAV 420
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+R + + + + + R+ D+D
Sbjct: 421 QNRFNSAITNLGNTVNNLSEARSRIEDSDY 450
>gi|116563763|gb|ABJ99894.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Reading]
gi|116563765|gb|ABJ99895.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Reading]
Length = 447
Score = 149 bits (374), Expect = 1e-33, Method: Composition-based stats.
Identities = 66/447 (14%), Positives = 133/447 (29%), Gaps = 50/447 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSF--------------------------------IRDDNGKVQITTIDYYLDPET 174
NG +T D
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKAYDVSATAAMDPKSFTNGTKNLTAPDATAIKAA 180
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ ++T + L ++ K + + + ++ A T A
Sbjct: 181 LGNPATTGDSLSATLSFKDGKYYATVAGYTNAADTSKNGKYEVNVDSATGAVTFNAAPTK 240
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A T D + P+ + S + + AA + + +
Sbjct: 241 ATVTGDTTVTKVQVNAPVAVSTDVKKALEDGGVSNADATAAKLVKMSYTDKNGKSIDGGY 300
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK---------------EIDSGY 339
Y + G V T + + + K
Sbjct: 301 ALEAGGKYYAATYDEGTGKITANVTTYTDSTGATKTAANQLGGVDGKTEVVTIDGKTYNA 360
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
S + + A E ++ ID + A +G++ +R + +
Sbjct: 361 SKAAGHDFKAQPELAEAAAKTTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITNLGNT 420
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQ 426
+ + + R+ D+D A+E + +S Q
Sbjct: 421 VNNLSEARSRIEDSDYATEVSNMSRAQ 447
>gi|237752810|ref|ZP_04583290.1| major flagellin subunit FlaA [Helicobacter winghamensis ATCC
BAA-430]
gi|229376299|gb|EEO26390.1| major flagellin subunit FlaA [Helicobacter winghamensis ATCC
BAA-430]
Length = 496
Score = 149 bits (374), Expect = 1e-33, Method: Composition-based stats.
Identities = 71/492 (14%), Positives = 135/492 (27%), Gaps = 44/492 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +A++A + +L ++SSGLR++ A D+A+ +IA ++S AL
Sbjct: 5 VNTNVNALNAHAQSTFTQTSLSSSLQKLSSGLRINSAKDDASGMAIADSLRSQANALGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G + IA M + + ++ TIK K T + +IQ++I +L L
Sbjct: 65 IRNTNDGMGIIQIADKAMDEQVKILDTIKTKATQAAQDGQTTQTRTAIQADINRLIESLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +S+NG + L + + + + ++
Sbjct: 125 NIAATTSYNGLSLLAGGFTNKEFQVGAYSNQTIRTSIGATSSDKIGHVRNETIRFSAGTA 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ R+ K V + K +
Sbjct: 185 LGEITMKFVGQRDGKDITLESVKISHSAGTGLGALAEVINKNSDNLGGIRAEATVQSIGA 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSP----------------------------- 271
+ I + T
Sbjct: 245 DSIAEGDIVSLTINGVRIGDITGVQKNDADGRLIQAINSRKEETGVEASLSEDGKLILTS 304
Query: 272 ------------SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
N S G + + T +
Sbjct: 305 TDGRAITVSGASGSDIIGDGFSTTNIGSLTLTKLGASDMKVSGGAFFSDTSIAQTTTSLR 364
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ ++ + A ++ ++ IK A
Sbjct: 365 ETKGVFGADVKSAIGANANLGNTFVGQAGDALGGGVTTLKGAMLVMDIAESAIKQLDAIR 424
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+GS+ ++ + I + + V+ + + D ASES S L Q ALS
Sbjct: 425 SDLGSVQQQMQSTINNITITQVNVKSAESGIREVDFASESANYSNLNILAQAGSYALSQS 484
Query: 440 NNSTARILSLFR 451
N + IL L +
Sbjct: 485 NATQQNILRLLQ 496
>gi|295112186|emb|CBL28936.1| Flagellin and related hook-associated proteins [Synergistetes
bacterium SGP1]
Length = 898
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 65/146 (44%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A+ A L + N +L+ +S+GLR++ AAD+AA +I++ M++ ++
Sbjct: 3 IYHNVPALFAYNALNNTNRSLQKSIQTLSTGLRINSAADDAAGLAISEKMRAQISGMNMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
G S + A+ ++ ++ ++ D + IQ E+ QL+ ++
Sbjct: 63 IRNAEDGVSMLQTAEGALASTHSILQRMRELAVQAANDTLTQQDREYIQLEVDQLKDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I+ + FN + L +S
Sbjct: 123 RISTATQFNNKKLLDGTSAGIWSSTD 148
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 51/172 (29%)
Query: 280 IRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGY 339
+ + + A K + + + +++T+ E +
Sbjct: 726 HKNVDVEFDPMANIKVTWNENLRNFVLSADGTPYETVLHIVDNSTIFQVGANEGEDLAID 785
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
++ + ++ +DT I + KIG+ + + +
Sbjct: 786 IGNMGANALGVTRVIVTDRGSATRAITILDTAIGKVSTQRAKIGAYQNSLEHTVSNLTTT 845
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ R+ DADMA LQ Q L+ N +LSL R
Sbjct: 846 STNLTAAESRIRDADMAKAMMEFVKLQVLNQSGTSMLAQANQLPQNVLSLLR 897
>gi|312880191|ref|ZP_07739991.1| flagellin domain protein [Aminomonas paucivorans DSM 12260]
gi|310783482|gb|EFQ23880.1| flagellin domain protein [Aminomonas paucivorans DSM 12260]
Length = 1932
Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 58/369 (15%), Positives = 112/369 (30%), Gaps = 4/369 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN SA+ +N L +R+S+GLR++ AAD+AA +I++ M++ L
Sbjct: 3 IFTNVSALLCLNTASKLNRQLSKALNRLSTGLRINSAADDAAGMAISEKMRAQTRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ G S + A+ G+ + ++ ++ G D IQ+EI QL Q+
Sbjct: 63 ARNAQDGMSLLQTAEGGLQEIQSMLQRMRELSVQGANDTLTAEDRGHIQTEIDQLGEQID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IAR + FN + L + ++ + + K + + V
Sbjct: 123 AIARQTQFNRKKLLDGTQAALWSTSTRDIGVVLSGPLTSKDSLGNLHSAAGNYKVTFSVL 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+G E+ + + S + + + +
Sbjct: 183 REGQEQVQKSHILSLKHGTHENNAAGNWSGSGLTSMSALNLVEGVWGLETRETPFGGIWY 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+G A A + T S + S M + D + +
Sbjct: 243 Y-QGAAISTAAAIGASVQASPTPNILAPGSYDLRVSDRVPMMASFDHALTNGIVTGVDMS 301
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
S V + + ++ S + + L
Sbjct: 302 SRGAGSNFDAVLGIRADEGAIAAASQTYRNDLTGGKSITADGAGGNVAFTTRATNDVNLF 361
Query: 361 MEEMVSFID 369
V+ D
Sbjct: 362 THFAVTATD 370
Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 38/101 (37%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
+ + A ++ +D + + IG+ +R+ ++ + R
Sbjct: 1829 VDNLDVRSQEAAARSITRLDNALDRVSTQRAAIGAQINRLEHTVPQLQTASAHLNAARSR 1888
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
++DADMA E + L Q S N +++LSL
Sbjct: 1889 ILDADMAREMMEFTKLNILMQANNMVTSQANQLPSQVLSLL 1929
>gi|325923282|ref|ZP_08184955.1| flagellin/flagellar hook associated protein [Xanthomonas gardneri
ATCC 19865]
gi|325546209|gb|EGD17390.1| flagellin/flagellar hook associated protein [Xanthomonas gardneri
ATCC 19865]
Length = 399
Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 53/449 (11%), Positives = 119/449 (26%), Gaps = 53/449 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + ++ + ++SSG R++ A+ +AA +I++ + L
Sbjct: 4 VINTNVMSLNAQRNLNTNSSSMALSIQQLSSGKRITSASVDAAGLAISERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
S G + +A+ +++ G + S
Sbjct: 64 ASRNANDG---ISLAQTAEGAMVEI----------GNNLQRIRELSVQSANATNSATDRE 110
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A S + + T+ ++ +V V + +
Sbjct: 111 ALNSEVKQLTSEIDRVANQTSFNGTKLLNGDFSGALFQVGADAGQTIGINSIVDANVDSL 170
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
G + + + K A ++
Sbjct: 171 GKANFAASVSGAGVTGTATASGSLSGITLAFKDASGAAKSVAVADIKIASGDTAADINKK 230
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
A A TSG +S T + G S T
Sbjct: 231 VASAINDKLDQTGMYASIDTSGNVKLESLKAGQDFTSLSGGTSGAAGITAGAGIQT---- 286
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
S + + ++ + +
Sbjct: 287 ------------------------------------ASAASGSTASTLSSLDISTFSGAQ 310
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ + +D + ++ +G++ +R + + + R+ D D A + L
Sbjct: 311 KALEIVDKALTSVNSSRADMGAVQNRFTSTIANLAATSENLTASRSRIADTDYAKTTAEL 370
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q QQ L+ + +LSL +
Sbjct: 371 TRTQILQQAGTAMLAQAKSVPQNVLSLLQ 399
>gi|224437397|ref|ZP_03658368.1| flagellin A [Helicobacter cinaedi CCUG 18818]
gi|313143860|ref|ZP_07806053.1| major flagellin subunit FlaA_2 [Helicobacter cinaedi CCUG 18818]
gi|313128891|gb|EFR46508.1| major flagellin subunit FlaA_2 [Helicobacter cinaedi CCUG 18818]
Length = 507
Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats.
Identities = 72/502 (14%), Positives = 139/502 (27%), Gaps = 55/502 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +A++A + Y+L+ +++SSGLR++ AAD+A+ +IA ++S AL
Sbjct: 5 VNTNINALNAHAQSTFTQYSLKNSMEKLSSGLRINKAADDASGMTIADSLRSQASALGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G + IA M + I ++ TIK K + IQ +I +L L
Sbjct: 65 IRNTNDGMGIIQIADKAMDEQIKILDTIKTKAVQAAQDGQSTQSRSMIQMDIKRLIEGLD 124
Query: 121 DIAR---------------GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT 165
+I F + + +S AS IG + V +
Sbjct: 125 NIGNTTTYNGMALLSGQFSNKEFQVGAYSNQTIKASIASTTSDKIGQVRIETGDLVTASG 184
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+ ++ T + + + + K+ D + A T +
Sbjct: 185 ETTVVFKNVDGVNDITLESVKISSSAGTGLGVLAEVINKNSDKTGIRAQANTITTSNEAI 244
Query: 226 TTSGAWLKAANATFDQAKGIA----------TIPVPLPAAPAAPNTTSGTSGSKSPSVAA 275
+ N T S+
Sbjct: 245 KSGSMANVMINGISIGDIIGIKKNDSDGRLVQAFNAATMHTGVEAYTDNFGRLMLRSMDG 304
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
+++ + + + N + + D +
Sbjct: 305 RGIDLKIDGAVGNQGDIAVEMVNGNHDLKNGSTNYGRLSLVRTDARDIVVSGTNISSTGY 364
Query: 336 DSGYSMVTLNITRHANTDA---------------------------YNEKLAMEEMVSFI 368
+ T +
Sbjct: 365 KDDTKIAQTTANLRDITGVFNADVKSASGANYNAVIASGGADLGAGVTSLRGAMVTMDIA 424
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
++ K +GS+ ++ + I + + V+ + + D A+ES+ S L
Sbjct: 425 ESAQKMLDKIRADLGSVQGQMISTVNNITVTQVNVKAAESTIREVDFAAESSEFSKLNIL 484
Query: 429 QQLAVQALSIVNNSTARILSLF 450
Q ALS N IL L
Sbjct: 485 AQSGSYALSQANAIQQNILRLL 506
>gi|166712054|ref|ZP_02243261.1| flagellin [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 399
Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats.
Identities = 69/452 (15%), Positives = 135/452 (29%), Gaps = 59/452 (13%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + +L + ++SSG R++ A +AA +IA+ + L
Sbjct: 4 VINTNVMSLNAQRNLNTNSSSLALSIQQLSSGKRITSFAVDAAGGAIAERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S A+ M + + + I+ TD +++ SE+ QL S++
Sbjct: 64 ASRNANDGISLSQTAEGAMQEIGNNLQRIRELSVQSANATNSSTDREALNSEVKQLTSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A +SFNG L + + + + I T+ V
Sbjct: 124 DRVANQTSFNGTKLLDGSFSGALFQVGADAGQTIGINSIADANIDTLGRANFAAAVSGAG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G + + G T + A + T
Sbjct: 184 VSGTATASGSVSGISLSFKDASGSAKSITIADVKVGAGDTAADVNKKVASAINDKLDQTG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + V + + A + TS ++G+ S + T I ++
Sbjct: 244 MYASIKSDGSVQIESLKAGQDFTSLSAGTSSAAGITVGTGITTASA-------------- 289
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ +LD + L + D +
Sbjct: 290 --------------ASGSTASTLGSLDISTFSGAQQALEIVDKALTTVNSSRADMGAVQN 335
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ + + +A+ R+ D D A +
Sbjct: 336 RFTSTIANLSATSENLSASRS----------------------------RIADTDYAKTT 367
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ L+ + +LSL +
Sbjct: 368 AELTRTQILQQAGTAMLAQAKSVPQNVLSLLQ 399
>gi|261886307|ref|ZP_06010346.1| flagellin B [Campylobacter fetus subsp. venerealis str. Azul-94]
Length = 519
Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats.
Identities = 68/515 (13%), Positives = 140/515 (27%), Gaps = 67/515 (13%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +AM+A + +L R+SSGLR+ AAD+A+ SIA +++ L
Sbjct: 5 INTNIAAMNAHTNAVVNDRSLSGSLGRLSSGLRIQTAADDASGMSIADSLRAQAAGLGQS 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
V A M + I ++ TIK K + +++QS+I +L +L
Sbjct: 65 IKNANDAIGIVQTADKAMDEQIKILDTIKTKAIQAAQDGQTSDSRRALQSDIIRLLEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I + T + + ++ S
Sbjct: 125 NIANTTSFNGQQLLNGSFSNKEFQIGAYSNETVKVSVGATNSNTIGHTRFETSSNVVYSK 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVL--KDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ + A A+
Sbjct: 185 GLALSGNSGGFTFTLKGIDGIAGGEYKFQTISSGVFAYQGLAALAAQVNTVADKTGVKAS 244
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ + + + + + ++ + + + V+ T T
Sbjct: 245 INNTQLFNGVDGKGILSASITDLKINGVPIGDLAIKNGDSDKVLIGAINKVKEQTGVEAT 304
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
D G T S ++ + + +
Sbjct: 305 LDNGKLTLTARDGRAIQINGGGISRIGITQAKGGANVSFLGQISFTRQDARDIVMVMSVA 364
Query: 359 LAMEEMVSFIDTQIKC------------------ATAAAGKIG----------------- 383
+ + + I + +++ A +G
Sbjct: 365 GVGQAITNGISMALSNNHVRQASVSLKTINDSVISSSVAAAMGFFHAGETAVDQRNSGVS 424
Query: 384 -------------SISSRIHLQEDFIKLMRDAV--------------EKGVGRLVDADMA 416
+ + + +++ + + ++ D D A
Sbjct: 425 TYAGAQAMMSIAEAARKTLDSIRSDLGSVQNQLVSTINNISVTQVNVKSAESQIRDVDFA 484
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ES S Q A+S N +L L +
Sbjct: 485 EESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 519
>gi|304438347|ref|ZP_07398288.1| bacterial flagellin family protein [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304368713|gb|EFM22397.1| bacterial flagellin family protein [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 460
Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats.
Identities = 70/464 (15%), Positives = 144/464 (31%), Gaps = 22/464 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N SA++ L L +VSSG++++ A D+A+ +I++ M+ +L
Sbjct: 4 VVKNNMSAVNTLNTLNKNQSALSQSLQKVSSGMKINSAGDDASGMAISERMRVQVRSLDQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G++ + A+ + I+V+ T+K K D + IQ E+ +L Q+
Sbjct: 64 DDKNTKNGAALLRTAEGAVQSTIEVLKTLKEKAINAANDTNTDEDRRLIQKEVDKLIDQI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ A + + G SF
Sbjct: 124 DENALTTYNGKYLIDGSKNGLVRGEAGLGTQTSFTNMSLATDTNGLTQLARLKRRDGNAV 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA-TTSGAWLKAANAT 238
D ++ + + + ++ + G I+++ T + T
Sbjct: 184 GIDPSDTLTASWVKNGVTYTGTLSPIGTGTITNMIGLITSQHASFHSTGPDVGVDEYGRT 243
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ + T+ T + + ++ S
Sbjct: 244 VYTPDNQNALTIRAFGEGVDGQVTAITFSVTDKAGKMRNEVNAVLDAFKETVRAQNPSPD 303
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRH----ANTDA 354
+ T A + D S L + + + VT +T
Sbjct: 304 NSLVLQTGTRANQAVKIGFTDMRSAALGLQSSDGRGWNHVVPTVTPPVTIDVVGGGPKVQ 363
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV-------EKGV 407
K A ++ + + AT A IG++ +R+ + + +
Sbjct: 364 VTTKEAANAAINVFENALIRATDQAVAIGAVQNRLKY-------TSNNLVVASENVQASE 416
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ DADMA E T + Q A L+ N +++ +LSL +
Sbjct: 417 STIRDADMAKEMTAYTKNNVLTQAAQAMLAQANQNSSTVLSLLK 460
>gi|116563725|gb|ABJ99875.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Paratyphi C]
gi|116563809|gb|ABJ99917.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Choleraesuis]
gi|116563847|gb|ABJ99936.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Choleraesuis]
Length = 446
Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats.
Identities = 63/446 (14%), Positives = 127/446 (28%), Gaps = 49/446 (10%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFI------------------------------RDDNGKVQITTIDYYLDPETVL 176
I + K I D +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKKYDVSDTAVAASYSDSKQNIAVPDKTAITAKIG 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+S + + ++ K D + + + ++ A T +
Sbjct: 181 AATSGGAGIKADISFKDGKYYATVSGYDDAADTDKNGTYEVTVAADTGAVTFATTPTVVD 240
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
D A +G + + +
Sbjct: 241 LPTDAKAVSKVQQNDTEIAATNAKAALKAAGVADAEADTATLVKMSYTDNNGKVIDGGFA 300
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ GY ++V K G V + + G T +T T +
Sbjct: 301 FKTSGGYYAASVDKSGAASLKVTSYVDATTGTEKTAANKLGGADGKTEVVTIDGKTYNAS 360
Query: 357 EKLAME----------------EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
+ + ID + A +G++ +R + +
Sbjct: 361 KAAGHNFKAQPELAEAAATTTENPLQKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTV 420
Query: 401 DAVEKGVGRLVDADMASESTRLSALQ 426
+ + R+ D+D A+E + +S Q
Sbjct: 421 NNLSSARSRIEDSDYATEVSNMSRAQ 446
>gi|78776374|ref|YP_392689.1| flagellin-like [Sulfurimonas denitrificans DSM 1251]
gi|78496914|gb|ABB43454.1| Flagellin-like protein [Sulfurimonas denitrificans DSM 1251]
Length = 392
Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats.
Identities = 65/448 (14%), Positives = 132/448 (29%), Gaps = 60/448 (13%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN SAM+A + N L+ +SSGLR++ AAD+A+ +IA ++ L
Sbjct: 5 INTNISAMNAHRNASMTNLGLDKSLGSLSSGLRITKAADDASGMAIADSLRQQAQGLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
G A + + I++ +TI+ K G S + + +Q+ + +
Sbjct: 65 VMNSNDGIGVTQTADGALDEYINIANTIRTKAIQAASDGQTSDTRK----AIQADIDRLM 120
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ + AS + + Y + + ++ S
Sbjct: 121 QE-------------AQNIASTTSFNGQTLLNGGYQNKSFHIGAYSGETVKISIEDSRTE 167
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
L + + + T + +T A+++++ A+
Sbjct: 168 KVGKFSLAESTTGLTATTGQAGVSTVSLSVTVTSADGTTSTSTGEAVLTSGAHSSYEIAQ 227
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ S + S +
Sbjct: 228 MVVDAFNSDAQTDGTNARASVYELTSSTA------------------------------- 256
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
S E T +T + +T + E+
Sbjct: 257 ------------GTAAFGIRVDSSDNFTTTEAGFTIGDATAALTNNFSTIDVTTREKAEK 304
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ D +K + IGS+ +++ I + + V+ ++ D D A+ES +
Sbjct: 305 AIIISDYTLKDLDSRRSDIGSVQNQLESTIRNISVTQVNVQAAESQIRDVDFAAESANFA 364
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+S N +L L +
Sbjct: 365 KFNILAQSGSYAMSQANAVQQNVLKLLQ 392
>gi|1173510|gb|AAA86521.1| flagellin Laf1 [Azospirillum brasilense]
Length = 414
Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats.
Identities = 120/451 (26%), Positives = 182/451 (40%), Gaps = 37/451 (8%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI+TN SAM+A Q +R + +L QDR+S+GL+V++A DNAAYWSIA M++D
Sbjct: 1 MASIMTNTSAMTALQTVRRVTDDLATTQDRISTGLKVNNAKDNAAYWSIATTMRADVAGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV +++ LGS + A ++ + T+K ++ AG G D IQ++I QL ++
Sbjct: 61 KAVKESLELGSGTTNTASVASKNIVENLQTLKARVIAGQTNGVDKSLIQNDIDQLVKLVK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A +SFNG+N LR + + D + ++ S
Sbjct: 121 GAAADASFNGDNLLRITYSNDGTA-----------KDQNVDILASLSRSAGTVDPSYISF 169
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + I+ + D+ SV A G T L
Sbjct: 170 QRQDMQVTSIVGKATIEQQVDSTNDLKASVGIAIGAPDTTFIDGQNLGLGNLTLNVTNEA 229
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
K T+ + TT G + + +A +
Sbjct: 230 GTKTAVTVDLSGIDYTTDLATTQGLIETAVNAALTTAGGDFQVAFNGDK----------- 278
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ D + S + A+ +
Sbjct: 279 ---------------LEFTDQDLNTDGNFTAKVDSLWVGSKESDAFGGLADLTQIDVTSN 323
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + I+ + A A IGSI +R+ +Q DF+ + D++ KG+G LVDADM ES+
Sbjct: 324 ATKSLEVINGLLDKAIGKAAVIGSIENRVSVQNDFVSKLTDSMNKGIGSLVDADMNEESS 383
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQ QQQLA QALSI N ILSLFR
Sbjct: 384 RLQALQVQQQLATQALSIANQGPQNILSLFR 414
>gi|9843797|emb|CAC03725.1| flagellin [Pseudomonas oleovorans]
Length = 457
Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats.
Identities = 56/457 (12%), Positives = 118/457 (25%), Gaps = 59/457 (12%)
Query: 46 YWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERG 102
IA + S L G S A+ + ++ +++ +++
Sbjct: 1 GLQIANRLTSQIHGLGVAVRNANDGISLAQTAEGALQQSTNILQRMRDLALQSANGSNSA 60
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD------------------------- 137
+ K+I +E+ QL+ +L IA ++F G L
Sbjct: 61 QERKAIGAEVNQLKEELTRIADTTTFGGRKLLDGSFGSTAFQVGSNANETINVTLTSASS 120
Query: 138 ----------LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
GS T + A + + + + G + + +
Sbjct: 121 DALGSYRSNVAGSITGTGAAAADLATAKRNVGFKAGDIDIKGSLGKKTVSVVADSSASEI 180
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ + +S + G + + + +
Sbjct: 181 AKAVNMAASETGVSAVAKNTISFGNGLGLTADTSDTDPANHTFDAISFDIGTKGGTKTSV 240
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
++S + SA+ G + I + G S
Sbjct: 241 TITASGDDATDLAALRDAINAESGTNGLSASINSDGELLVAAVNGDNIEIQNYKGNAGSG 300
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT-------------------- 347
A + + + D D V N +
Sbjct: 301 AAVNLTVNVDNGSGTFAGDYTLDATNAAFKAVGTVQFNASSVFTIEGASVDELTGQTVGQ 360
Query: 348 -RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ ++ ++ ID + A +G++ +R ++ + + V
Sbjct: 361 LNRITDIKVDTASNAQDAIAVIDGALANIDAQRADLGAVQNRFDNTIANLQNISENVSAA 420
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
GR+ D D A+E+ LS Q QQ L N
Sbjct: 421 RGRIQDTDFAAETANLSKNQVLQQAGTAILLQANQLP 457
>gi|260888511|ref|ZP_05899774.1| flagellin [Selenomonas sputigena ATCC 35185]
gi|330838182|ref|YP_004412762.1| flagellin domain protein [Selenomonas sputigena ATCC 35185]
gi|260861708|gb|EEX76208.1| flagellin [Selenomonas sputigena ATCC 35185]
gi|329745946|gb|AEB99302.1| flagellin domain protein [Selenomonas sputigena ATCC 35185]
Length = 437
Score = 147 bits (369), Expect = 4e-33, Method: Composition-based stats.
Identities = 63/450 (14%), Positives = 143/450 (31%), Gaps = 15/450 (3%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ N A++ L L +VSSG++++ A D+A+ ++I++ M+ +L
Sbjct: 3 LVVKNNMMAVNTLNTLNKNQSALSTSLKQVSSGMKINGAVDDASGYAISERMRVQIRSLD 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
+ G+S + +A+ +S +D++ T+K K+ + +L +
Sbjct: 63 QDNQNTQNGNSMMKVAEGAVSSTVDILKTLKEKVINAANDTNTDDDRLTIQKELNQSIDQ 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I ++ D + A + + V + + LD L+ +
Sbjct: 123 INDNANITFNGKYLVDGTHNQKVTATTTTFTNQSMSTATVATSAMTGLLDRTGRNLNIHS 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
T +++ +ST+ F +
Sbjct: 183 QDTITVSYVNQGKTETTS---------------FKVSTQTFSEVIKRLSGTGIVGGMATD 227
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ I + + + + + S + S +
Sbjct: 228 VGATSVIGTNVAGDTVYTASGESAISLYAAGTGVGKSVGGITFSITDTQGNINKSANAVL 287
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ TV N+ + + + + + +T + +
Sbjct: 288 DAFSETVRAQDNSQDNSMNFQIGTRANQAIRVGMTDMRAQALGLQGSDGSTLNISTRDKA 347
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ +D I A IG++ SR++ + + V+ + DADMA T
Sbjct: 348 NAAINVLDNAISKALDQQTTIGAVQSRLNYTSQNLTTASENVQASESTIRDADMAKAMTN 407
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q A L+ N S++ +LSL +
Sbjct: 408 YTKNNVLMQAAQAMLAQANQSSSGVLSLLQ 437
>gi|196249407|ref|ZP_03148105.1| flagellin domain protein [Geobacillus sp. G11MC16]
gi|196211164|gb|EDY05925.1| flagellin domain protein [Geobacillus sp. G11MC16]
Length = 594
Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats.
Identities = 47/367 (12%), Positives = 119/367 (32%), Gaps = 3/367 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++A + L ++ +R+SSGLR++ AAD+AA +I++ M+S L
Sbjct: 3 INHNIQALNAYRNLAANQSSISKNLERLSSGLRINRAADDAAGLAISEKMRSQIRGLQMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ +D +IQ+E+ QL ++
Sbjct: 63 ERNALDAISLIQTAEGALNEVHSILQRMRELAVQAANDTLEPSDRAAIQAEVDQLTKEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + + +S S++ + + +T +
Sbjct: 123 RIADTTQFNQKILFSGSPEGKAFAETRSSAISYVGNGTWQGVVTAKPTNPAEFVLDFSRG 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + I + + + D + T + A +
Sbjct: 183 FGMLSQDEIDKKTFTINGKVYEIDAKGDGISDTGHIAVNVTWNDNATDDSDAVANINSLL 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A A + + + + + ++ + + + + +++ D
Sbjct: 243 DALKNAILNNDSTFDSTSSVVGASDNNDNNDAIITNGQLRLVTAKPMSPKEANGINVSYD 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T + + + E+ TL +T+ + + +
Sbjct: 303 FDPTTEVKSLIVVEEQALVPETFTLTFSDVPKNGDVLKIDNLTIMFSDSMESGYSPSQGQ 362
Query: 361 MEEMVSF 367
+
Sbjct: 363 GTATIDV 369
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 36/87 (41%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ ID I + GK+G+I +R+ + + + + R+ D DMA E +
Sbjct: 507 ITVIDQAINTVSEERGKLGAIQNRLEHTINNLTTANENLTSAESRIRDTDMAMEMAEFTK 566
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q A L+ N IL L +
Sbjct: 567 NNILTQAAQAMLAQSNQLPQGILQLLK 593
>gi|264676588|ref|YP_003276494.1| flagellin-like protein [Comamonas testosteroni CNB-2]
gi|262207100|gb|ACY31198.1| flagellin-like protein [Comamonas testosteroni CNB-2]
Length = 392
Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats.
Identities = 61/452 (13%), Positives = 116/452 (25%), Gaps = 66/452 (14%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I TN +++A + L +L R+SSGLR++ A D+AA +IA+ M + L+
Sbjct: 4 TINTNIQSLNAQRNLGTSQSSLSTSMQRLSSGLRINSAKDDAAGLAIAERMSAQVRGLNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ +S + I+ D ++Q E+ QL+ ++
Sbjct: 64 AQRNANDGVSLAQTAEGALSTIGGNLQRIRELAVQSRNATNSTEDRAALQKEVDQLKEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A +SFNG L + + D QI + + V S
Sbjct: 124 DRVATTTSFNGTKLLNGSFTDQEFQVGANQGQVIKVGDFVNAQIDKLGTWSAAADVKTYS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ GT D+ V + +G T T+ A
Sbjct: 184 NAAGTGPTIADDKLALSFDINGVTIGVAADTSRTTGQGVTALKAAFDTAVAANPEKLKGM 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + N
Sbjct: 244 SMDAAGKITVANADQSASISNLVG------------------------------------ 267
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + ++ + A A +
Sbjct: 268 ----------MTALALGTETVTTVVAKGASQTGFDKLDVSTIAGSDNAIVAMDAALKDVN 317
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + I + + + S + + ++
Sbjct: 318 SARADLGAIQNRFESVVSNLSVNSENLSASKSRIMDADFASETANLSRSQI--------- 368
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
QQ ++ N +LSL R
Sbjct: 369 --------LQQAGTAMVAQANQLPQGVLSLLR 392
>gi|157961180|ref|YP_001501214.1| flagellin domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157846180|gb|ABV86679.1| flagellin domain protein [Shewanella pealeana ATCC 700345]
Length = 393
Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats.
Identities = 63/451 (13%), Positives = 125/451 (27%), Gaps = 64/451 (14%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN ++M A L N +++ +R+SSGLR++ A D+AA I+ M S +
Sbjct: 4 SVNTNVTSMRAQGNLNSANSSVQTSMERLSSGLRINSAKDDAAGLQISNRMTSQINGIGV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M ++ +++ +++ D ++Q EIT L ++L
Sbjct: 64 AMRNANDGISIAQTAEGAMQESTNILQRMRDLSLQSANGSNSADDRAAMQKEITSLNAEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ +SF G+ L + G+ + + + + + L +
Sbjct: 124 TRISDTTSFGGQKLLDGNYGTQNFQVGANANETISLTLSDISADQLGSSGQSVDGALTAA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T G P ++ T + T+ A +
Sbjct: 184 EITATVAGGTGSGEISFSYTPLDGSAETLTADLTGVTDADGMAAAINTALAGASISTGVV 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ G + T + + A + + V +
Sbjct: 244 ASSDGTDVTFGGIGNNGDVLTLTRKIDDGTTTAPATAFALGGDDSQVNSVNDIDLTTEAG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
++ A + +
Sbjct: 304 SQSAISTIDAAISQIDSQRADLGAVQNRMNFT---------------------------- 335
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ + + A R+ D D A E+
Sbjct: 336 -----INNLSNIQSNVSDARS----------------------------RIQDVDFAKET 362
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLF 450
L+ Q Q + L+ N LSL
Sbjct: 363 AELTKQQILSQTSSAMLAQANQLPQAALSLL 393
>gi|86211128|gb|ABC87261.1| flagellin [Xanthomonas campestris pv. campestris]
Length = 399
Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats.
Identities = 68/452 (15%), Positives = 132/452 (29%), Gaps = 59/452 (13%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + ++ + ++SSG R++ A+ +AA +I++ + L
Sbjct: 4 VINTNVMSLNAQRNLNTNSSSMALSIQQLSSGKRITSASADAAGLAISERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S A+ M + + + I+ TD +++ SE+ QL S++
Sbjct: 64 ASRNANDGISLAQTAEGAMVEIGNNLQRIRELSVQSANATNSATDREALNSEVKQLTSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A +SFNG L D + + + + + ++ +V
Sbjct: 124 DRVANQTSFNGTKLLNGDFSGALFQVGADAGQTIGINSIVDANVDSLGKANFAASVSGAG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T G L +
Sbjct: 184 VTGAATASGSLSGITLAFKDASGAAKSVA------------------------------- 212
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + K A+ GN + ++ +
Sbjct: 213 ----VADIKIASGDTAADINKKVASAINDKLDQTGMYASIDTSGNVKLESLRVGQDFTSL 268
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G + + G S + S + L I A T + +
Sbjct: 269 SGGTSGAAGITAGAGIQTASAASGSTASTLSSLDIPTFSGAQKALEIVDKALTSVNSSRA 328
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
M + + + I A + + + SRI D A +
Sbjct: 329 DMGAVQNRFTSTIANLAATSENLTASRSRIADT---------------------DYAKTT 367
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ QT QQ L+ + +LSL +
Sbjct: 368 AELTRTQTLQQAGTAMLAQAKSVPQNVLSLLQ 399
>gi|167769546|ref|ZP_02441599.1| hypothetical protein ANACOL_00880 [Anaerotruncus colihominis DSM
17241]
gi|167668514|gb|EDS12644.1| hypothetical protein ANACOL_00880 [Anaerotruncus colihominis DSM
17241]
Length = 390
Score = 146 bits (367), Expect = 7e-33, Method: Composition-based stats.
Identities = 62/452 (13%), Positives = 135/452 (29%), Gaps = 68/452 (15%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ +N A++A ++L N + +++SSG R++ A D+A+ +I++ MK+ L
Sbjct: 4 VVRSNIMAVNAQRQLGMNNSQVGKALEKLSSGYRINRAGDDASGLAISEKMKAQIKGLDT 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQL 119
S G S V A+ +++ ++++ + T G+ ++ S+Q E+ +LQ ++
Sbjct: 64 ASLNSQDGISLVQTAEGALTEVHNMLNRMTELATRAANGINEDSNRASLQKEVAKLQEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ G++FN L + + + + D
Sbjct: 124 DRISEGTNFNNLKLLDGSQTYAGNTALIGKGTANGVMGLSVEGGNLSADAEISVNISADK 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ T + G K V
Sbjct: 184 TGTVTVKAGGKATGVKFTVT---------------------------------------- 203
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A + + + S + +
Sbjct: 204 ----QTGKGFYSVTADVSGVTDDKIKAAWSGVTANFSVDGPKDDGTYAAGEQKFTAGKNE 259
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
A N ++ D + + ++I R+A +++
Sbjct: 260 SMQLQIGDTADSFNQLKVGIGSMSSAALGVDKVDISNQEGAAKAIDIIRNAIDRVSSQRA 319
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ + ++ I A+ + S +SRI D DMA
Sbjct: 320 SLGATQNRLEYTINNLDTASENLQSANSRI---------------------RDTDMAKMM 358
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + Q A L+ N +L L +
Sbjct: 359 MEYTKMNVLTQSAQAMLAQANQQPQSVLQLLQ 390
>gi|152990389|ref|YP_001356111.1| flagellin [Nitratiruptor sp. SB155-2]
gi|151422250|dbj|BAF69754.1| flagellin [Nitratiruptor sp. SB155-2]
Length = 512
Score = 146 bits (367), Expect = 7e-33, Method: Composition-based stats.
Identities = 62/508 (12%), Positives = 132/508 (25%), Gaps = 60/508 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N A L+ L +R+ +GLR++ A D+AA IA + + AL
Sbjct: 5 VNYNFQADFGHVNLKKTESRLNTSLERLETGLRINSAKDDAAGLFIADQLGLVSKALDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI---TAGVERGTDS--------------- 105
S G S IA++ + + D ++++ K
Sbjct: 65 SRNANDGISASQIAESTLGQIYDKLTSMYTKASQAANDTNDANARAALQNDIKAITDAID 124
Query: 106 ------------------KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
+ Q + Q +I+ S T G +
Sbjct: 125 RMAKAAEFNGKKLLDGTFTNQQIQYGPRAGQSLNISISSVTANNLGAYTVNGVGATGVDT 184
Query: 148 SVIGSFIRDDNGKVQITTIDYYL------------------------DPETVLLDSSTDG 183
+ + + N + + + + ++ + +
Sbjct: 185 ANDYATLTAANTNWGYDSTNDSIKIAGKAITLANDTVDDAAALAAAINGDSDITSKGIEA 244
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + +Y S +A + L +
Sbjct: 245 YASNSSIADTAFSPISAGSDGTTVIKLYVGSDRTEDATITIAAGTELTLNELVDQINAQA 304
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
G + T G + +A + + ++ +
Sbjct: 305 GEKVTASNVDGKLKLDTPNGETLGFEVTINGTAANGADSVDLSMLLQGASGTVTAGTAAV 364
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
T S V D + + + + + + N+ +
Sbjct: 365 TGSAVKVGKLEIMGTDAFTIDHTGVSGTNEGYNFDTATGGTSTLSNLNSLNVTTYDDAQS 424
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ I+ IK + +GSI + D + R+ + D A E + +
Sbjct: 425 AMKIINIAIKKVDKSRSDLGSIQQNLQAIIDNNDFAATQTREAESRIRNVDFAKEMSEFT 484
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
QT Q + L+ N +L L R
Sbjct: 485 RQQTLMQSGMAMLAQANQLPQMVLQLLR 512
>gi|109390656|emb|CAJ77722.1| flagellin [Escherichia coli]
Length = 371
Score = 146 bits (367), Expect = 7e-33, Method: Composition-based stats.
Identities = 51/404 (12%), Positives = 104/404 (25%), Gaps = 39/404 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSESDLSSIQDEIKSRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D G + + + D T D +
Sbjct: 124 DRVSSQTQFNGVNVLAKD-GKMNIQVGANDGQTITIDLKKIDSSTLNLSSFDATNLGTSV 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T + K + V +
Sbjct: 183 KDGATINKQVAVGAGDFKDKASGSLGTLKLVEKDGKYYVNDTTNSKYYDAEVDTSKGEIN 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + P S + + Y +D ++ T +
Sbjct: 243 FNSTNESGTPPTAATEVTTVGRDVKLDASALKANQSLVVYKDKSGNDAYIIQTKDVTTNQ 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + T + L
Sbjct: 303 STFNAANISDAGVLSIGASTTAPSNLT--------------------------------- 329
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
+ + +D I +G++ +R+ + +
Sbjct: 330 --ADPLKALDDAIASVDKFRSSLGAVQNRLDSAIANLNNTTTNL 371
>gi|15606990|ref|NP_214372.1| flagellin [Aquifex aeolicus VF5]
gi|6225337|sp|O67803|FLAA_AQUAE RecName: Full=Flagellin
gi|2984236|gb|AAC07764.1| flagellin [Aquifex aeolicus VF5]
Length = 518
Score = 146 bits (367), Expect = 8e-33, Method: Composition-based stats.
Identities = 69/516 (13%), Positives = 131/516 (25%), Gaps = 66/516 (12%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T I N+ A L+ + R+S+GLR+ AAD+A+ IA + + L
Sbjct: 3 TRINYNYEAAVTYTSLKQNERLMNKSLLRLSTGLRILSAADDASGLFIADQLALVSAGLE 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQ 118
+ I G S + IA+ G+S+ D + T+ K + ++Q +I L+
Sbjct: 63 QGNRNIQFGISALQIAEGGVSQIYDKLKTMYQKAVSAANDINDPNARAALQRDIENLRDA 122
Query: 119 LRDIARGSSFNGENWLRTD--------------------LGSSTASIAKSVIGSFIRDDN 158
+ IA+ + +NG L + V
Sbjct: 123 ILKIAQDTEYNGIRLLNGSFNNVRIHYGARSAQTLSVSISSVLPQQLGGYVAEDSPATAT 182
Query: 159 GKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+ T + + + + + + + I
Sbjct: 183 DTNNVLTNIGTTNTNYSVASGDSLAFTFTDGTSITFNSLNQLGYDFNNTGTYILDASAIV 242
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
T G ++A +A T + G + + T
Sbjct: 243 NTINNNPTLQGKGIRAYAENVSEADLTFDTTNVNIDQGDEVTITFYSGGELVFTKTYTDT 302
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN------------------------- 313
I S V N
Sbjct: 303 VTLDQFIADINNQAGGKLIASKDPSGTKLVLSTPNGETISVEVTVNDADGDTVVSSINLG 362
Query: 314 ---THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID- 369
+T+ + + + ++ +D
Sbjct: 363 ALLQGAAGTVVNTSGATASAVKVGTLIVMGSENFTVQGTGIAYFTAATSGTFNSLNDVDV 422
Query: 370 -----TQIKCATAAAG---------KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+I +IGS + + D + +D + + + D
Sbjct: 423 TTNKGAEIAQVLIQRAVRQVDTIRTQIGSTINNLQAIYDAQAVAKDNTDNAESIIRNVDF 482
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A E T + Q + Q V L+ N +L L R
Sbjct: 483 AKEMTEFTKYQIRMQSGVAMLAQANALPQLVLQLLR 518
>gi|19910973|dbj|BAB87738.1| flagellin protein FliA(H) [Clostridium haemolyticum]
Length = 554
Score = 146 bits (366), Expect = 9e-33, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 3/133 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ L +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNINAMNAHRRIGINTVKLGKAMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D + IQ EI QL ++
Sbjct: 63 SRNAQDGISLIQTAEGALNETHAIVQRMRELSVQAANDTNTKDDREQIQKEIKQLIEEVD 122
Query: 121 DIARGSSFNGENW 133
I + FN
Sbjct: 123 RIGNTTEFNTIKL 135
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 24/311 (7%), Positives = 62/311 (19%), Gaps = 2/311 (0%)
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I + + + K+ + +
Sbjct: 228 DRIIQHEMTHAVMNDALGIDKMNDLHDKNKLWFIEGTAEAMAGADERVKDIIGNDTQTGI 287
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ V + + Y I++K L +
Sbjct: 288 DNTKLSKLATRADALLNGVSWNSSDEDYAAGYLMVKYIASKGIDLKAVMKEIKNTGASGL 347
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D + + + I + +
Sbjct: 348 DNKIDLTNLKIDFKNNLENYIKDISKVHLDWDDDEKDVGSILGSDHGHGDIKAEDVVKGT 407
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD--AYNE 357
P +T + E S + + +
Sbjct: 408 TPEKEQPLDKFKIIWPDDNSDNTTGKIQLQVGANEGQSITISLKDMRSSALGIEKLEVTS 467
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ + + D I+ + ++G+ +R+ + + + ++ R+ D DMA
Sbjct: 468 FESASQSIKSCDNAIEKISNFRSELGAYQNRLEHTINNLNTSAENLQASESRIRDVDMAK 527
Query: 418 ESTRLSALQTQ 428
E S
Sbjct: 528 EMMNFSKNNIL 538
>gi|153829348|ref|ZP_01982015.1| flagellin [Vibrio cholerae 623-39]
gi|148875189|gb|EDL73324.1| flagellin [Vibrio cholerae 623-39]
Length = 317
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 81/230 (35%), Gaps = 4/230 (1%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
MT ++ TN SAM+A + L L +R+SSG R++ A D+AA I+ + + +
Sbjct: 1 MTINVNTNVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRG 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQ 116
L G S A+ M+++ ++ +++ ++ +++ E LQ
Sbjct: 61 LDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQ 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+L IA +SF G L G ++ I S + I
Sbjct: 121 DELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFIAEQ 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ G + K + + + ++ T
Sbjct: 181 PKTKEWGVPPTARDLKFEFTKKDGEAVVLDIMAKDGDDIEELATYINGQT 230
Score = 39.7 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 38/324 (11%), Positives = 80/324 (24%), Gaps = 10/324 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++KA ++T ++ + + + +
Sbjct: 4 NVNTNVSAM-TAQRYLTKATGELNTSMERL-----SSGNRINSAKDDAAGLQISNRLTAQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + + + + +
Sbjct: 58 SRGLDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESV 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ S +AS I + + ++A + I
Sbjct: 118 ALQDELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFI 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A P +K A + DI AT N T +
Sbjct: 178 AEQPKTKEWGVPPTARDLKFEFTKKDGEAVVLDIMAKDGDDIEELATYINGQTDLFKASV 237
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
K+ + E S + +G V + V
Sbjct: 238 DQEGKLQIFVAEPNIEGNFNISGGLATELGLNGGPGVK----TTVQDIDITSVGGSQNAV 293
Query: 366 SFIDTQIKCATAAAGKIGSISSRI 389
ID +K + +G+ +R+
Sbjct: 294 GIIDAALKYVDSQRADLGAKQNRL 317
>gi|255322858|ref|ZP_05363999.1| flagellin B [Campylobacter showae RM3277]
gi|255300069|gb|EET79345.1| flagellin B [Campylobacter showae RM3277]
Length = 500
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 69/496 (13%), Positives = 149/496 (30%), Gaps = 48/496 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++ N NL + ++SSGLR+ AAD+A+ +IA ++S AL
Sbjct: 5 INTNINALNTHANAVGNNRNLSLSLGKLSSGLRIQTAADDASGLAIADSLRSQASALGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ +A M + + ++ TIK K T + +++Q++I +L +L
Sbjct: 65 IANGNDAIGIIQVADKAMDEQLKILDTIKVKATQSAQDGQTSDSRQALQADIVRLMEELD 124
Query: 121 DIAR----------GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL 170
+I +F+ + + + T + S + +
Sbjct: 125 NIGNSTSFNGQQLLNGTFSNKEFQIGAYSNQTVKASIGATTSDKIGLTRFESSKLLTFAG 184
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
L+ + + + L + V D +G +T ++
Sbjct: 185 VVSLTFLNVDGINNVKVAAATISTGLGKGVGALAENINKVTDKTGVRATFDTTWVSSKAI 244
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS------------VAASAT 278
+ I + V A ++ +
Sbjct: 245 SGGQILSLVINGVKIGDLEVKAGDKNGALVNAINKVKDQTGVEASVNTEGKMVLTSRDGR 304
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID-- 336
I++ + K + G N + + L
Sbjct: 305 AIKISGDKVSAGLGGKRGTSMFIGRLNLVRLDGRDIKVSTGAGTGDLSVAFSKTANSQGG 364
Query: 337 ---------------------SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
G+ ++ + A + ++ ++ K
Sbjct: 365 NQQSVALRDIRGQLDPDLAAAMGFQRMSNGVMTSAQSAGVMTLRGAMAVMDIAESAQKTL 424
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+GS+ +++ + I + + V+ ++ D D A+ES S Q A
Sbjct: 425 DQIRSDLGSVQNQLVATVNNITVTQVNVKSAESQIRDVDFAAESANFSKFNILAQSGSYA 484
Query: 436 LSIVNNSTARILSLFR 451
+S N+ +L L +
Sbjct: 485 MSQANSVQQNVLRLLQ 500
>gi|318056201|gb|ADV36284.1| flagellin protein FliA(C) [Clostridium septicum]
Length = 388
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 58/451 (12%), Positives = 113/451 (25%), Gaps = 68/451 (15%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA SI++ M+ L
Sbjct: 3 INHNMNAMNAHRNMASNTVATGKSMEKLSSGLRINRAGDDAAGLSISEKMRGQIRGLEQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + + +++ ++ ++ D + E+ QL+S++
Sbjct: 63 SRNSQDGISLIQTTEGALNETHSILQRMRELSVQASNDTNTSEDRGQLTKELDQLKSEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L D
Sbjct: 123 RISSQTQFNKMDVLNGDGDKP--------------------------------------- 143
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ ++ D + K
Sbjct: 144 -----FKANIQVGANSNQAIEIAIDKMDYDSLFKAHSVSGDAVKGDNITIKAKKDITITI 198
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
K I +K A + ++
Sbjct: 199 DTKKIVVEADKGTVDKTLTKGELVAEINKGIEKDADLKGKVKASFADDKLTISRVDGLDK 258
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ T + +++ A ++
Sbjct: 259 EVTVKIEDNNASGNTKLGSGQDTKSKMEVFKVDFTSHAAATGSISAIDRAIEKVSTQRSQ 318
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + ++ IK AA + + SR + D DMA+E
Sbjct: 319 LGAYQNRLEHTIKNVDNAAENLQAAESR---------------------VRDVDMANEMM 357
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A L+ N +L L R
Sbjct: 358 TFSKNNILTQAAQAMLAQANQQPQGVLQLLR 388
>gi|115381396|gb|ABI96380.1| phase 2 flagellin [Salmonella enterica subsp. diarizonae]
gi|115381398|gb|ABI96381.1| phase 2 flagellin [Salmonella enterica subsp. diarizonae]
Length = 463
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 64/463 (13%), Positives = 126/463 (27%), Gaps = 54/463 (11%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRITSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAKS----------------------------------------VIGSFIRDD 157
+ A G+ +
Sbjct: 121 NTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVKDTAATTKAYADNGTTLDVS 180
Query: 158 NGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI 217
+ + + +
Sbjct: 181 GLDDAAIKAATGGTTGAPTVTGGAVKFDADNNKYFVTIGGFTGGDAAKNGDYEVNVATDG 240
Query: 218 STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASA 277
AT + A T Q V A A T+ + + ++ +
Sbjct: 241 KVTLATGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALIAAGVDTTDANAATLVKMS 300
Query: 278 TYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
+ G + A Y +T A T Y + TT + L
Sbjct: 301 YTDKNGKTIEGGYALKAGDKYYAADYNETTGAIKAKTTSYTAADGTTKTAANQLGGADGK 360
Query: 338 GYSMVTLNITRHANTD-----------AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ T +A+ A E + ID + +G++
Sbjct: 361 TEVVTIDGKTYNASKAAGHDFKAQPDLAEAAAKTTENPLQKIDAALAQVDTLRFDLGAVQ 420
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+R + + + + R+ D++ +E + +S Q Q
Sbjct: 421 NRFNSPITNLGNTVNNLTSARSRIEDSEYGTEVSNMSRAQNLQ 463
>gi|73666291|gb|AAZ79822.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Schwarzengrund]
gi|73666293|gb|AAZ79823.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Schwarzengrund]
gi|73666295|gb|AAZ79824.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Schwarzengrund]
gi|73666297|gb|AAZ79825.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Schwarzengrund]
Length = 438
Score = 145 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 56/437 (12%), Positives = 108/437 (24%), Gaps = 54/437 (12%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANGTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIR--------------DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
I + +D T + T + ++
Sbjct: 121 NDGETIDIDLKEISSKTLGLDKLNVQDAYTPKETAVTVDKTTYKNGTDTVTAQSNTDIET 180
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
DI + + D
Sbjct: 181 AIGGGATGVTGADIKFKDGQYYLDVKGGASAGVYKATYDETYKKVNIDTTDKTPLATAEA 240
Query: 253 PAAPAAPNTTSGT-------------------------------------SGSKSPSVAA 275
A T K+ V
Sbjct: 241 TAIRGTATITHNQIAEVTKEGVDTTTVAAQLAAAGVTGADKDNTSLVKLSFEDKNGKVID 300
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
++MG+ K + T + A V T +
Sbjct: 301 GGYAVKMGDDFYAATYDEKTGTITAKTTTYTDGAGVAQTGAVKFGGANGKSEVVTATDGK 360
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
S + + R E + ID + +G++ +R +
Sbjct: 361 TYLASDLDKHNFRTGGELKEVNTDKTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITN 420
Query: 396 IKLMRDAVEKGVGRLVD 412
+ + + R+ D
Sbjct: 421 LGNTVNNLSSARSRIED 437
>gi|319405215|emb|CBI78820.1| Flagellin [Bartonella sp. AR 15-3]
Length = 399
Score = 145 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 96/450 (21%), Positives = 175/450 (38%), Gaps = 54/450 (12%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
TS+LTN SA++A Q LR+I+ NL+ +DRVS+GLR+++A+DN AYWSI+ +M+ D+ +S
Sbjct: 3 TSLLTNKSAITALQTLRNIDANLDRSKDRVSTGLRINNASDNTAYWSISSMMRHDSNTMS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
A+ DAI LG +V IA + + + I+ + + + +I ++Q +
Sbjct: 63 AIVDAINLGKEQVGIADTAIGLTKEALDDIQKSMVS------AREKGSDDIAKIQDSILG 116
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
R S ++ + + + R + V + ID +
Sbjct: 117 NMRNISNAVQSASFGGKNILSNGGQTVGMAAGYRREGTAVYVDMIDVGGPELNFGVIGPD 176
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ + + + +D+ + T +L T
Sbjct: 177 GAIDMSQGVLGGIFGSSKGEDAEDVVAKGIEEFSTAHATYKELEDTLRKAEADY------ 230
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + +
Sbjct: 231 ------------------------------------------AKAVAKYGESPEDEAAKE 248
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ A D + ++ + +D + +++ M
Sbjct: 249 IVDKAKEAVETAKKAVEDGQEAYDKAKGEFQGVLDGMTLTDFTELKGVGELHTDIQRMIM 308
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ + + + A KIG+ + +++Q +F+K + D +E G+G LVDADM +ES +
Sbjct: 309 TSVQNTVRDAVNVTLTAGSKIGAAVNLVNIQLNFVKKLLDNIEVGIGALVDADMNAESAK 368
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ALQ QQQL +QALSI N + IL+LFR
Sbjct: 369 LAALQVQQQLGIQALSIANQGSQNILALFR 398
>gi|126728918|ref|ZP_01744733.1| flagellin-like protein [Sagittula stellata E-37]
gi|126710848|gb|EBA09899.1| flagellin-like protein [Sagittula stellata E-37]
Length = 422
Score = 145 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 101/441 (22%), Positives = 170/441 (38%), Gaps = 19/441 (4%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M A L+ IN + + ++S+GLRV+ A DNAA W+IA+ M+SD S +SD++ LG
Sbjct: 1 MIALHTLKSINDQMSQTRRKISTGLRVASARDNAAVWAIAKTMESDVAGFSRISDSLNLG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
S V +A+ G D+++ +K KI A E D IQ++I L+ Q+ + + FNG
Sbjct: 61 MSSVSVARKGAETVTDLLTRMKEKIVAAQEENVDRDKIQADIVALRDQIGAVVGAAQFNG 120
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
N L + + + + + T+ + + G
Sbjct: 121 LNLLSNRSMHAGSGGINVLASLDRSSSGVRASDIRVGKQDLGLTLSSIGTGLTSLAAGAN 180
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
+ L + + ++ +A +G + + + A+
Sbjct: 181 EITGFGDATASALTGAATAPTGVTTFGTSASQSVAVGTGFAIWISGSAGGAPSATASGNE 240
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
A + + + + N+IT +
Sbjct: 241 INYVARDGDTMADVARALTAQFNRYVEADLGATATAGIGAEASGNTITFTGAGSVGDDFS 300
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
V Y D+ ST + + ++ ID
Sbjct: 301 VRVDQYAADSSSTIGG-------------------GLSSLMYVDVTSQKGADAALADIDR 341
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ A AA GS R+ Q DF+K + +A++ G+G LVDADM + + ALQ QQQ
Sbjct: 342 LLDTAIDAAASFGSAGGRLETQADFVKSLTNALKSGIGSLVDADMEETAAQFQALQVQQQ 401
Query: 431 LAVQALSIVNNSTARILSLFR 451
LAV +LSI N + + +LSLFR
Sbjct: 402 LAVTSLSIANQAPSLLLSLFR 422
>gi|295110994|emb|CBL27744.1| Flagellin and related hook-associated proteins [Synergistetes
bacterium SGP1]
Length = 912
Score = 145 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 66/147 (44%), Gaps = 3/147 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ N A+SA + + +L+ ++S+GLR++ AAD+AA +I++ M++ L
Sbjct: 2 VVMHNIPALSAYNTVNRTSSSLQKSIQKLSTGLRINSAADDAAGLAISEKMRAQIRGLDR 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQL 119
G S + A+ +++ ++ ++ D IQ EI QL+ ++
Sbjct: 62 AVSNSQDGISMIQTAEGALNETHSILQRMRELSVQSANDTLTQQDRGYIQLEIDQLREEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIA 146
I + FN + L D +S
Sbjct: 122 TRIGNTTQFNKKKLLNGDAAVLWSSDN 148
Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 57/206 (27%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
+ S + N D+ A S D
Sbjct: 707 QDATESSYTVSVKDAHSGDIVASNVQITGNRLYGVVNPNVDVEFDAMAGVSAKWDSARKG 766
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
A + ++TT+ E N ++ + +
Sbjct: 767 FVYAAKDYSTTLHLADNTTVFQIGANEGEDMGINIGDMRAHALGLNAVLVTDRESAARSI 826
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ ID I + K+G+ +R+ + + + + R+ D DMA E + L
Sbjct: 827 TIIDNAIDKVSTQRAKLGAYQNRLEHTINNLNTAAENLTSAESRIRDTDMAKEMMNFTKL 886
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q Q L+ N +L+L R
Sbjct: 887 QIMLQAGTSMLAQANQLPQSVLTLIR 912
>gi|114565767|ref|YP_752921.1| flagellin-like protein [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114336702|gb|ABI67550.1| Flagellin and related hook-associated proteins-like protein
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 936
Score = 145 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 55/425 (12%), Positives = 125/425 (29%), Gaps = 18/425 (4%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + L + N+ +R+SSGLR++ AAD+AA +I++ M++ L+
Sbjct: 3 INHNVSALNAYRNLTITDRNMSRSLERLSSGLRINRAADDAAGLAISEKMRAQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
G S + A+ +++ D++ ++ +D ++IQ EI QL +++
Sbjct: 63 ISNAQDGISLIQTAEGALNETHDILQRMRELSVQAANDTLTASDRQNIQQEIDQLITEID 122
Query: 121 DIARGSSFNGENWLRTDL---------GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
I + FN + L + + ++
Sbjct: 123 RIGNTTEFNTKKLLDGSSSALTTTDKLTTRVFMRDGLRVVDQFGQKAPGGGNYKLNIEAQ 182
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ + ++G N + ++ +V+ A +F G
Sbjct: 183 AGIAQVQKTDIMRVKHGETTTNIDMGYNQAKVQLAVTTVFGADDANDIYEFNFEFEDGVN 242
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
A A + + + I+
Sbjct: 243 TSVEVTLTGGTTAGQFSTKLADAVAAHSVLKNRITIQATTGATTGNFDIQSLTKGAAGNF 302
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
+ T T + + T+ D E T + + + + N
Sbjct: 303 ALTVNRTDVNAATGTGRFNIDGTNAIGDGELQTDSVDTSITSTSTTLLKGTDVAQSGLQN 362
Query: 352 TDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR------IHLQEDFIKLMRDAVEK 405
K ++ + + +AA + + + + +
Sbjct: 363 FQVTGLKQGTYKITTDVSAAATLVSAANLDLVAQYRQSGTGDLVESISATTASAGTTLST 422
Query: 406 GVGRL 410
+
Sbjct: 423 AGSTV 427
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 39/356 (10%), Positives = 88/356 (24%)
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
G D + E+ + LRDI +G L + S +
Sbjct: 580 ANGGTFVQFDRSAGVGELATKGTALRDIEAFWDKSGNFLLESAQKISIIQGDGQKAEITL 639
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
+ + + + + + Q V+
Sbjct: 640 FGTDTIGSVVQKLNDAIANQLGQAQLAGIGATHSDKFVSFVTEGGKQDSGLETVAGTFVI 699
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ T T G + K + A + ++
Sbjct: 700 RSAITGDAGELTFVGDENVIKALSLTNLKDAKENTFTVNVTDAHTGNYIAKDVNIEGNML 759
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + + T+ + Y ++T + P +
Sbjct: 760 VGTVHQNVDVEFDNMTGIKLEWNTATKNFDLKGGFANREDTYVHIADNTMVFQIGANPLQ 819
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
N ++ +S +D I+ ++ K+G++ +R+ +
Sbjct: 820 DVGAAIGDMRARALGVNNILVTDRDHATASISKLDAAIQRVSSERSKMGALQNRLDHTIN 879
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + + R+ D D A E + Q Q L+ N +L L
Sbjct: 880 NLGVASENLTAAESRIRDLDFAKEMMSFTRSQIMLQAGTAMLAQANMKPQSVLQLL 935
>gi|157961179|ref|YP_001501213.1| flagellin domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157846179|gb|ABV86678.1| flagellin domain protein [Shewanella pealeana ATCC 700345]
Length = 394
Score = 145 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 66/451 (14%), Positives = 126/451 (27%), Gaps = 64/451 (14%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN ++M A L N + + +R+SSGLR++ A D+AA I+ M S +
Sbjct: 4 SVNTNVTSMRAQNNLNSANSSTQTSMERLSSGLRINSAKDDAAGLQISNRMTSQINGIGV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M ++ +++ +++ D ++Q E+T LQ++L
Sbjct: 64 AMRNANDGISIAQTAEGAMQESTNILQRMRDLSLQSANGSNSADDRAAMQKEMTSLQAEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ +SF G+ L D G+ + + + + + L +
Sbjct: 124 TRISDTTSFGGQKLLNGDYGTQNFQVGANANETISLTLSDISADQLGSSGQSVDGALTAA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T G P ++ T + T+ A +
Sbjct: 184 EITATVAGGTGSGEISFSYTPLDGSAETLTADLTGVTDADGMAAAINTALAGASISTGVI 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ G + T + + A + + I V +
Sbjct: 244 ASSDGTDVTFGGIGNNGDVLTLTRKIDDGTTTAPATAFALGGDDSQVISVDDIDLTTEAG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
++ A + +
Sbjct: 304 AQSAISTIDAAIIQIDSQRADLGAVQNRMSFT---------------------------- 335
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ + T A +I D D A E+
Sbjct: 336 -----INNLSNIQSNVTDARSRI----------------------------QDVDFAKET 362
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLF 450
L+ Q Q + L+ N LSL
Sbjct: 363 AELTKQQILSQTSSAMLAQANQLPQTALSLL 393
>gi|1524309|emb|CAA66927.1| flagellin [Pseudomonas aeruginosa]
Length = 434
Score = 145 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 49/434 (11%), Positives = 118/434 (27%), Gaps = 36/434 (8%)
Query: 46 YWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERG 102
IA + + L+ + G S A+ + ++ +++ I++
Sbjct: 1 GLQIANRLTNQISGLNVATRNANDGISLAQTAEGALQQSTNILQRIRDLALQSANGSNSD 60
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
D ++Q E+ Q++L I+ ++F G L G+++ + + +
Sbjct: 61 ADRAALQKEVAAQQAELTRISDTTTFGGRKLLDGSFGTTSFQVGSNAYETIDISLQNASV 120
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
Y + +S GT + V +K+I + D++ I+ K
Sbjct: 121 SAIGSYQVGSNGAGTVASVAGTATASGIASGTVNLVGGGQVKNIAIVAGDSAKAIAEKMD 180
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
A + ++ + + TS S +
Sbjct: 181 GAIPNLSARARTVFTADVSGVTGGSLNFDVTVGSNTVSLAGVTSTQDLADQLNSNSSKLG 240
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL----------- 331
+ I + + + + +
Sbjct: 241 ITASINDKGVLTITSATGENVKFGVQTGTATAGQVAVKVQGSDGKFEAAAKNVVAAGTAA 300
Query: 332 ----------------------PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ + + + + + ++ +D
Sbjct: 301 TTTIVTGYVQLNSPTAYSVSGTGTQASQVFDNASAAQKSSVASVDISTADGAQNAIAVVD 360
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ A +G++ +R D + + + R+ D D A+E+ LS Q Q
Sbjct: 361 NALAAIDAQRADLGAVQNRFKNTIDNLTNISENATNARSRIKDTDFAAETAALSKNQVLQ 420
Query: 430 QLAVQALSIVNNST 443
Q L+ N
Sbjct: 421 QAGTAILAQANQLP 434
>gi|114799536|ref|YP_758995.1| flagellin Laf1 [Hyphomonas neptunium ATCC 15444]
gi|114739710|gb|ABI77835.1| flagellin Laf1 [Hyphomonas neptunium ATCC 15444]
Length = 415
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 105/451 (23%), Positives = 172/451 (38%), Gaps = 36/451 (7%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+S+M A + LR+IN NLE VQ +S+G +VS+A DNAA W+++ +M SD +
Sbjct: 1 MSSILTNNSSMVALETLRNINRNLETVQSEISTGKKVSNAKDNAAVWAVSTVMSSDVASF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
A+SD++ LGSS V +A++ K + + IK I D Q++I + +
Sbjct: 61 KAISDSLNLGSSTVGVARSASEKVVTTLEEIKTLIVQAQGENVDRAKYQTDIEEKIGLIE 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ FNG N L + +A S + + D +
Sbjct: 121 GYVSAAQFNGLNLLDGSSTDAVNVLASLDRASNGTVSASYISVDRQDLSVSGGGSNAVFG 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
++D + + +
Sbjct: 181 ATADTSTTIIDNGGTNAGTAETVANGATQ------------------------------- 209
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + T ++G+ S + S V I++
Sbjct: 210 -----TIAIASVGDGYSYRVTLDDSAGANSLGTRSFEFVADSATSSEDVAEALSTQISNF 264
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T V + + + + D G + V +
Sbjct: 265 LSATGDDNYTVSFSGSDISITNLSGDDLDITGAAAADGTAGVNAGGLGALASIDVTTNAG 324
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ I+ + A AA GS +RI Q +F++ + D++ G+G L D DM + S
Sbjct: 325 ATSALTAIEGLMNKAIDAAAAFGSSQNRIAGQSEFVQTLVDSLTTGIGGLTDTDMEAASA 384
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+L ALQ QQQL VQALSI N + +LSLFR
Sbjct: 385 KLQALQVQQQLGVQALSIANQAPQALLSLFR 415
>gi|325916939|ref|ZP_08179183.1| flagellin/flagellar hook associated protein [Xanthomonas
vesicatoria ATCC 35937]
gi|325536842|gb|EGD08594.1| flagellin/flagellar hook associated protein [Xanthomonas
vesicatoria ATCC 35937]
Length = 399
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 67/452 (14%), Positives = 136/452 (30%), Gaps = 59/452 (13%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + +L + ++SSG R++ + +AA +IA+ + L
Sbjct: 4 VINTNVMSLNAQRNLNTNSSSLALSIQQLSSGKRITSFSVDAAGGAIAERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S A+ M + + + I+ TD +++ SE+ QL S++
Sbjct: 64 ASRNANDGISLSQTAEGAMQEIGNNLQRIRELSVQSANATNSSTDREALNSEVKQLTSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A +SFNG L + + + + I ++ V
Sbjct: 124 DRVANQTSFNGTKLLDGSFSGALFQVGADAGQTIGINSIADANIDSLGKASFAAAVSGAG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G + + G T + A + T
Sbjct: 184 VSGTATASGSVSGISLSFNDASGSAKSVTIADVKVGAGDTAADVNKKVAAAINDKLDQTG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + + + A + TS ++G+ S + I ++ A+T S+
Sbjct: 244 MYASIKTDGTLQIESLKAGQDFTSLSAGTSSAAGITVGAGITTASAASGSTASTLGSLDI 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
++ + + +
Sbjct: 304 STFSGAQKALEIVDKALTTVN-----------------------------------SSRA 328
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
M + + I +A + + + SRI D A +
Sbjct: 329 DMGAVQKRFTSTIANLSATSENLSASRSRIADT---------------------DYAKTT 367
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ L+ + +LSL +
Sbjct: 368 AELTRTQILQQAGTAMLAQAKSVPQNVLSLLQ 399
>gi|269796405|ref|YP_003315860.1| flagellin/flagellar hook associated protein [Sanguibacter keddieii
DSM 10542]
gi|269098590|gb|ACZ23026.1| flagellin/flagellar hook associated protein [Sanguibacter keddieii
DSM 10542]
Length = 390
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 62/453 (13%), Positives = 125/453 (27%), Gaps = 68/453 (15%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI N +A+++ + L + +L +++SSG R++ AAD+AA +I++ ++S G L
Sbjct: 3 LSINQNIAAVNSYRNLSNTQNDLSKSLEKLSSGFRINRAADDAAGLAISEGLRSQVGGLK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQ 118
+ G S V A+ +++ ++ +++ + K+I +E TQL S+
Sbjct: 63 VAARNAQDGISVVQTAEGALTETHAILQRVRDLAVQAGNDSNNAEARKNIDTEATQLVSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I++ ++FNG N L G + + V + V ++ + +
Sbjct: 123 LDRISKSTNFNGTNLLDGTAGGGSGKLQFQVGADGDANSQITVDLSGANIKAIAADLSTG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
S G + + + + D + T++T +
Sbjct: 183 SLAVGGTEFTVSTAALTASAYTFSVDNGSGVTSDIAVTLATAPTSVQ------------- 229
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
N + + + + G V
Sbjct: 230 -------GLADALAADTNFNANFSVNVIKDANGAATGISVKALNGGDVAVVDPGAGIDGG 282
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ T + + G T +
Sbjct: 283 NQVANTQQGLDFSSAAAAQASITKIDEKISSVSTARANLGALQNRFEHTVKNINVSVENL 342
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
A E + D +
Sbjct: 343 SASESRIRDTDMASEMVNFTRA-------------------------------------- 364
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
Q Q L+ N +LSL R
Sbjct: 365 -------QILSQAGTSMLAQANQIPQGVLSLLR 390
>gi|73666241|gb|AAZ79797.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Manhattan]
gi|73666243|gb|AAZ79798.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Manhattan]
gi|73666245|gb|AAZ79799.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Manhattan]
Length = 438
Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats.
Identities = 56/437 (12%), Positives = 107/437 (24%), Gaps = 54/437 (12%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANGTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIR--------------DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
I + +D T + T + +
Sbjct: 121 NDGETIDIDLKEISSKTLGLDKLNVQDAYTPKETAVTVDKTTYKNGTDTITAQSNTDIQT 180
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
DI + + D
Sbjct: 181 AIGGGATGVTGADIKFKDGQYYLDVKGGASAGVYKATYDETYKKVNIDTTDKTPLATAEA 240
Query: 253 PAAPAAPNTTSGT-------------------------------------SGSKSPSVAA 275
A T K+ V
Sbjct: 241 TAIRGTATITHNQIAEVTKEGVDTTTVAAQLAAAGVTGADKDNTSLVKLSFEDKNGKVID 300
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
++MG+ K + T + A V T +
Sbjct: 301 GGYAVKMGDDFYAATYDEKTGTITAKTTTYTDGAGVAQTGAVKFGGANGKSEVVTATDGK 360
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
S + + R E + ID + +G++ +R +
Sbjct: 361 TYLASDLDKHNFRTGGELKEVNTDKTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITN 420
Query: 396 IKLMRDAVEKGVGRLVD 412
+ + + R+ D
Sbjct: 421 LGNTVNNLSSARSRIED 437
>gi|90021847|ref|YP_527674.1| adenylate kinase [Saccharophagus degradans 2-40]
gi|89951447|gb|ABD81462.1| flagellin-like protein [Saccharophagus degradans 2-40]
Length = 580
Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 86/207 (41%), Gaps = 3/207 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN +A++A ++L ++ +R+SSG R++ A D+AA +I+ M S L
Sbjct: 3 LVINTNVAALNAQRQLVASGNDMSEAMERLSSGKRINTARDDAAGLAISNRMTSQIRGLD 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G S + A+ + + +++ ++ TD ++ +E+ QL+++
Sbjct: 63 QAVRNANDGVSMIQTAEGALDEVTNILQRMRELSIQSANGIYSDTDRSTLDAEVQQLKAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA+ +SFNG+ L LGS + + + + G + D
Sbjct: 123 VDRIAKSTSFNGQPLLDGSLGSVSLQVGAEANQTIALEIPGFNTSSLGGASGDIVGGETA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ + D H + V + D
Sbjct: 183 AGLTTLALFDTADAAHTLYVNDTAISD 209
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 39/87 (44%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ + ID ++ + ++G++++R+ + + + R+VDAD
Sbjct: 483 IGTAAGAQKSIDVIDKALEQINSTRSQLGAVNNRLDFTMSNLSNVAEKTSAAKSRIVDAD 542
Query: 415 MASESTRLSALQTQQQLAVQALSIVNN 441
A E++ LS Q QQ + L+ N
Sbjct: 543 FAKETSELSRAQVLQQASQAMLAQANA 569
>gi|87242488|gb|ABD33783.1| flagellin [Bacillus weihenstephanensis]
gi|87242494|gb|ABD33786.1| flagellin [Bacillus weihenstephanensis]
Length = 368
Score = 144 bits (361), Expect = 4e-32, Method: Composition-based stats.
Identities = 54/415 (13%), Positives = 126/415 (30%), Gaps = 50/415 (12%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ LS ++ G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLSVAANNTQDGMSLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ ++ Q+ E L+ Q+ I++ + FN + L
Sbjct: 61 NSVSNILLRMRDLSNQSANGTNTDENQQALNKEFAALKDQIDYISKNTEFNDKKLLDGSN 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
S D++ + +
Sbjct: 121 KSIAIQ----------------------------TLDNADTTKQINIDLSNVSTDTLNIS 152
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
+ D++V + I+ + + A A+ T T V
Sbjct: 153 GLTINGKKDITVTISDKDIANAATDIGKATSAQQGLADLTDTTPAVPDTPAVIGTGTAGN 212
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
P + + P + + + + S A
Sbjct: 213 PQFPAVKGTPEIPGSSPAEIAKAVDDFKQAFNKVKGLMSDSAVSAMEQKFATFEKDKSLA 272
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ + + I G + + ID ++ +
Sbjct: 273 NAKDIGTAFSAPIAGNITKGEQNASG-------------------AIKSIDAALEKIASN 313
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ + +K ++ ++ DADMA E + ++ + + +
Sbjct: 314 RATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGI 368
>gi|291520247|emb|CBK75468.1| Flagellin and related hook-associated proteins [Butyrivibrio
fibrisolvens 16/4]
Length = 535
Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats.
Identities = 69/522 (13%), Positives = 130/522 (24%), Gaps = 85/522 (16%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ + KL +L V +++SSG ++ A+DN + +IA M++ L
Sbjct: 3 INNNMSAVITNNKLLGTEGSLSDVMEKLSSGFSINHASDNPSGIAIAGKMQAQIDGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S G S + A+ +++ +++ ++ + ++IQ EI L S++
Sbjct: 63 STNGSDGISVLQTAEGALNEVTEMIQRMRELSVQAANGTNSDAEREAIQQEIDSLLSEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV------------QITTIDY 168
+++ + FN N L L T + I + G ++
Sbjct: 123 RVSQTTEFNKINLLDGTLDCRTYGNNATRIATSNTVAAGIYRLRIDEAAERALADFSLAG 182
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
++ S T + + D S T +
Sbjct: 183 GSFSQSFDNTYSRVETTHNVTTPATATNYKDFIDQTSWETITRDYSDPAGTVTTTTGIKN 242
Query: 229 GAWLKAANATFDQAKGIATIPVPLP---------AAPAAPNTTSGTSGSKSPSVAASATY 279
G L + + A A + +
Sbjct: 243 GLGLSGSISINGYPMTFAQGESGESVYGKLRMACEKGGAVISDFDAADGLKIRSYKYGAD 302
Query: 280 IRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGY 339
+ V + S + D + + D
Sbjct: 303 AELKVEFSSVEFASALGFNGSLNTDPSGATLPRINNVGKDAKIVLYKNNLDDAGNSVESL 362
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS--------------- 384
+ E D + T IGS
Sbjct: 363 YGQQATYKTEGRRVIVTDTKGFEMSFLADDGFVGEITFNVTDIGSMALQVGANEGQSMKV 422
Query: 385 -------------------------ISSRIHLQEDFIKLMRDAVEKGVGRLV-------- 411
+ ++ +R + RL
Sbjct: 423 RIASVSTEFMYIDDVDVTRAQGPEDAMDALESALGYVTTVRSQLGAYENRLEHTTKSLDA 482
Query: 412 -------------DADMASESTRLSALQTQQQLAVQALSIVN 440
DADMA+ + L +Q V AL+ N
Sbjct: 483 TEENMTSAISRVEDADMATTMVEYTKLNVLEQAGVSALAQAN 524
>gi|73666331|gb|AAZ79842.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Dublin]
Length = 437
Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats.
Identities = 57/437 (13%), Positives = 114/437 (26%), Gaps = 53/437 (12%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTDL-------- 138
++ SIQ EI Q ++ ++ + FNG L D
Sbjct: 61 RVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGA 120
Query: 139 --------------------------GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
G A++ Y +D
Sbjct: 121 NDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDTYAAGADKYRVDI 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + + ++ + N ++ + T T + K +
Sbjct: 181 NSGAVVTDAVAPDKVYVNAANGQLTTDDAENNTAVDLFKTTKSTAGTAEAKAIAGAIKGG 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSG----------------TSGSKSPSVAAS 276
K + + +TT + + + +
Sbjct: 241 KEGDTFDYKGVTFTIDTKTGDDGNGKVSTTINGEKVTLTVADIAIGAADVNAATLQSSKN 300
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + T S N+ V K
Sbjct: 301 VYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKGESKITVNGAEYIANATGDKITLAGKT 360
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
++ N DA K + ++ ID+ + A +G+I +R +
Sbjct: 361 MFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGAIQNRFDSAITNL 420
Query: 397 KLMRDAVEKGVGRLVDA 413
+ R+ DA
Sbjct: 421 GNTVTNLNSARSRIEDA 437
>gi|73666319|gb|AAZ79836.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Dublin]
gi|73666321|gb|AAZ79837.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Dublin]
gi|73666325|gb|AAZ79839.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Dublin]
Length = 437
Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats.
Identities = 57/437 (13%), Positives = 115/437 (26%), Gaps = 53/437 (12%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTDL-------- 138
++ SIQ EI Q ++ ++ + FNG L D
Sbjct: 61 RVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGA 120
Query: 139 --------------------------GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
G A++ Y +D
Sbjct: 121 NDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDTYAAGADKYRVDI 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + + ++ + N ++ + T T + K +
Sbjct: 181 NSGAVVTDAVAPDKVYVNAANGQLTTDDAENNTAVDLFKTTKSTAGTAEAKAIAGAIKGG 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSG----------------TSGSKSPSVAAS 276
K + + +TT + + + +
Sbjct: 241 KEGDTFDYKGVTFTIDTKTGDDGNGKVSTTINGEKVTLTVADIAIGAADVNAATLQSSKN 300
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + T S N+ V + K
Sbjct: 301 VYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKGESKITVNGAEYTANATGDKITLAGKT 360
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
++ N DA K + ++ ID+ + A +G+I +R +
Sbjct: 361 MFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGAIQNRFDSAITNL 420
Query: 397 KLMRDAVEKGVGRLVDA 413
+ R+ DA
Sbjct: 421 GNTVTNLNSARSRIEDA 437
>gi|73666323|gb|AAZ79838.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Enteritidis]
Length = 437
Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats.
Identities = 57/437 (13%), Positives = 115/437 (26%), Gaps = 53/437 (12%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTDL-------- 138
++ SIQ EI Q ++ ++ + FNG L D
Sbjct: 61 RVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGA 120
Query: 139 --------------------------GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
G A++ Y +D
Sbjct: 121 NDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDTYAAGADKYRVDI 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + + ++ + N ++ + T T + K +
Sbjct: 181 NSGAVVTDAAVPDKVYVNAANGQLTTDDAENNTAVDLFKTTKSTAGTAEAKAIAGAIKGG 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSG----------------TSGSKSPSVAAS 276
K + + +TT + + + +
Sbjct: 241 KEGDTFDYKGVTFTIDTKTGDDGNGKVSTTINGEKVTLTVADIATGATDVNAATLQSSKN 300
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + T S N+ V + K
Sbjct: 301 VYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKGESKITVNGAEYTANATGDKITLAGKT 360
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
++ N DA K + ++ ID+ + A +G+I +R +
Sbjct: 361 MFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGAIQNRFDSAITNL 420
Query: 397 KLMRDAVEKGVGRLVDA 413
+ R+ DA
Sbjct: 421 GNTVTNLNSARSRIEDA 437
>gi|73666333|gb|AAZ79843.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Enteritidis]
Length = 437
Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats.
Identities = 57/437 (13%), Positives = 115/437 (26%), Gaps = 53/437 (12%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTD--------- 137
++ SIQ EI Q ++ ++ + FNG L D
Sbjct: 61 RVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGA 120
Query: 138 -------------------------LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
G A++ Y +D
Sbjct: 121 NDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDTYAAGADKYRVDI 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + + ++ + N ++ + T T + K +
Sbjct: 181 NSGAVVTDAAAPDKVYVNAANGQLTTDDAENNTAVDLFKTTKSTAGTAEAKAIAGAIKGG 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSG----------------TSGSKSPSVAAS 276
K + + +TT + + + +
Sbjct: 241 KEGDTFDYKGVTFTIDTKTGDDGNGKVSTTINGEKVTLTVADIATGATDVNAATLQSSKN 300
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + T S N+ V + K
Sbjct: 301 VYTSVVNGQFTFDDKTKNESAKLSDLEVNNAVKGESKITVNGAEYTANATGDKITLAGKT 360
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
++ N DA K + ++ ID+ + A +G+I +R +
Sbjct: 361 MFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGAIQNRFDSAITNL 420
Query: 397 KLMRDAVEKGVGRLVDA 413
+ R+ DA
Sbjct: 421 GNTVTNLNSARSRIEDA 437
>gi|118474693|ref|YP_892763.1| flagellin B [Campylobacter fetus subsp. fetus 82-40]
gi|118413919|gb|ABK82339.1| flagellin B [Campylobacter fetus subsp. fetus 82-40]
Length = 519
Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats.
Identities = 66/515 (12%), Positives = 141/515 (27%), Gaps = 67/515 (13%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +AM+A + +L R+SSGLR+ AAD+A+ SIA +++ L
Sbjct: 5 INTNIAAMNAHTNAVVNDRSLSGSLGRLSSGLRIQTAADDASGMSIADSLRAQAAGLGQS 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
V A M + I ++ TIK K + +++QS+I +L +L
Sbjct: 65 IKNANDAIGIVQTADKAMDEQIKILDTIKTKAIQAAQDGQTSDSRRALQSDIIRLLEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I + T + + ++ S
Sbjct: 125 NIANTTSFNGQQLLNGSFSNKEFQIGAYSNETVKVSVGATNSNTIGHTRFETSSNVVYSK 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVL--KDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ + + A A+
Sbjct: 185 GLALSGNSGGFTFTLKGIDGIAGGEYKFQTISSGVFASQGLAALAAQVNTVADKTGVKAS 244
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ + + + + + ++ + + + V+ T +
Sbjct: 245 INNTQLFNGVDGKGILSASITDLKINGVPIGDLAIKNGDSDKVLIGAINKVKEQTGVEAS 304
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ G T S ++ + + +
Sbjct: 305 LENGKLTLTARDGRAIQINGGGISRIGITQAKGGANVSFLGQISFTRQDARDIVMVMSVA 364
Query: 359 LAMEEMVSFIDTQIKC------------------ATAAAGKIG----------------- 383
+ + + I + +++ A +G
Sbjct: 365 GVGQAITNGISMALSNNHVRQASVSLKTINDSVISSSVAAAMGFFHAGETAVDQRNSGVS 424
Query: 384 -------------SISSRIHLQEDFIKLMRDAVEKGVG--------------RLVDADMA 416
+ + + +++ + + ++ D D A
Sbjct: 425 TYAGAQAMMSIAEAARKTLDSIRSDLGSVQNQLVSTINNISVTQVNVKSAESQIRDVDFA 484
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ES S Q A+S N +L L +
Sbjct: 485 EESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 519
>gi|238784718|ref|ZP_04628722.1| Flagellin [Yersinia bercovieri ATCC 43970]
gi|238714397|gb|EEQ06405.1| Flagellin [Yersinia bercovieri ATCC 43970]
Length = 419
Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats.
Identities = 62/454 (13%), Positives = 125/454 (27%), Gaps = 60/454 (13%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I TN +++ + L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 23 MSVINTNILSLNTQNNMTKSQSALGSAIERLSSGLRINSAKDDAAGQAIANRFTSNIRGL 82
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ + G S + +++ + + ++ +D SIQ EI
Sbjct: 83 TQAARNANDGISVAQTTEGALNEINNNLQRVRELTVQASTGSNSTSDLSSIQDEIQLRMD 142
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ ++ + FNG L +D S A I + ++ +
Sbjct: 143 EIDRVSAQTQFNGVKVLSSDTKMSIQVGANDNETIDISLKEVTSKTLNLEGFNVTGPKGG 202
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
++ + + D ++ G +
Sbjct: 203 ATAALAAADFQKAFGATTAMTTATSAETTDGALAARLGVAKASVTVGTAPTKDSAGNWFT 262
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
D AT L A + + S + + T + I + + +
Sbjct: 263 KVDIKANDATEANNLKANGFDIASGATKSFYIAVDPQTADTTTTAATAAISIDTASLSLK 322
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
G TN + + +D + ++L T + N
Sbjct: 323 KLTTGATNDPLKALDAAISDIDVQRSSLG------------AVQNRFQSTVTNLNNTVNN 370
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
A + + D + + + +
Sbjct: 371 LTAAQSRIQDADYATEVSNMSRAQ------------------------------------ 394
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 395 ---------ILQQAGTSVLAQANQVPQTVLSLLR 419
>gi|120554040|ref|YP_958391.1| flagellar hook-associated protein FlgL [Marinobacter aquaeolei VT8]
gi|120323889|gb|ABM18204.1| flagellar hook-associated protein 3 [Marinobacter aquaeolei VT8]
Length = 410
Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats.
Identities = 62/453 (13%), Positives = 136/453 (30%), Gaps = 49/453 (10%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I + +L+DIN NL Q ++S+G +V+ +D+ + + +
Sbjct: 1 MIRISSQQIFSGGINRLQDINSNLVNTQQQLSTGKKVNKPSDDPVAAARILKLDQELQRS 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
L +++ ++ ++ A+D++ ++ D +SI +E+ +
Sbjct: 61 ETYGRNANLADNRLKQEESTLASAVDIIQRVRELTVQAGNGSLSANDRQSISAELKERLG 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
QL +IA +GE GS+ A + D G+
Sbjct: 121 QLANIANTRDASGEYIFSGFQGSTPAFAQNDDGKWVYQGDEGQR---------------- 164
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
++++ V I ++ F +TS +
Sbjct: 165 -----------------VLEIDDGVTVPISDHGKGIFVDVAKGVFAKGSTSVDGYISNLE 207
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+P T +G + + I +
Sbjct: 208 FVAPKDMTDAFSPRVPDDFDIAVTANGAGDLEISASYTRGGIIYPLAVEPAGALVGDEFQ 267
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ T + V+ + + + ++L +D + + A
Sbjct: 268 VAGVKLTINDAQDGDTFTLGVNDKQSVFGTIENLIAGLDGISKTTPKSSAEYDALIAET- 326
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ +D + ++G + + F++ ++ +L D D A
Sbjct: 327 -------LVNLDNAQESIILKQTELGGRLNAVESTTAFLEDSALYTKEIRSQLQDVDYAE 379
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ LS Q A Q+ + V+ LSLF
Sbjct: 380 AISNLSFQSFVLQAAQQSFAQVSQ-----LSLF 407
>gi|258621057|ref|ZP_05716091.1| Flagellin A [Vibrio mimicus VM573]
gi|258586445|gb|EEW11160.1| Flagellin A [Vibrio mimicus VM573]
Length = 402
Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 81/230 (35%), Gaps = 4/230 (1%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
MT ++ TN SAM+A + L L +R+SSG R++ A D+AA I+ + + +
Sbjct: 24 MTINVNTNVSAMTAQRYLNKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRG 83
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQ 116
L G S A+ M+++ ++ I++ + +++ E T LQ
Sbjct: 84 LDVAMRNANDGISIAQTAEGAMNESTSILQRIRDLALQSANGTNSTAERQALNEEATALQ 143
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+L IA +SF G L G ++ I S + I
Sbjct: 144 DELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFVAEQ 203
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ G + K + + + ++ T
Sbjct: 204 AKTKEWGVPPTARDLKFEFTKKDGEAVVLDIMAKDGDDIEELATYINGQT 253
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/386 (13%), Positives = 105/386 (27%), Gaps = 10/386 (2%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++KA ++T ++ + + + +
Sbjct: 27 NVNTNVSAM-TAQRYLNKATGELNTSMERL-----SSGNRINSAKDDAAGLQISNRLTAQ 80
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + + T + +
Sbjct: 81 SRGLDVAMRNANDGISIAQTAEGAMNESTSILQRIRDLALQSANGTNSTAERQALNEEAT 140
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ S +AS I + + ++A + +
Sbjct: 141 ALQDELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFV 200
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A +K A + DI AT N T +
Sbjct: 201 AEQAKTKEWGVPPTARDLKFEFTKKDGEAVVLDIMAKDGDDIEELATYINGQTDLFKASV 260
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
K+ + + S + +G V + V
Sbjct: 261 DQEGKLQVFVAEPNIQGNFNISGGLATELGLNGGPGVK----TTVKDIDITSVGGSQNAV 316
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID +K + +G+ +R+ + +++ VE R+ D D A E+T+L+
Sbjct: 317 GIIDAALKYVDSQRADLGAKQNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKS 376
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ L+ +SL +
Sbjct: 377 QILQQAGTSILAQAKQLPNSAISLLQ 402
>gi|73666265|gb|AAZ79809.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Derby]
gi|73666267|gb|AAZ79810.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Derby]
gi|73666271|gb|AAZ79812.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Derby]
Length = 437
Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats.
Identities = 57/437 (13%), Positives = 114/437 (26%), Gaps = 53/437 (12%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTDL-------- 138
++ SIQ EI Q ++ ++ + FNG L D
Sbjct: 61 RVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGA 120
Query: 139 --------------------------GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
G A++ Y +D
Sbjct: 121 NDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDTYAAGADKYRVDI 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + + + + N ++ + T T + K +
Sbjct: 181 NSGAVVTDAVAPNKVYVNAANGQLTTDDAENNTAVDLFKTTKSTAGTAEAKAIAGAIKGG 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSG----------------TSGSKSPSVAAS 276
K + + +TT + + + +
Sbjct: 241 KEGDTFDYKGVTFTIDTKTGNDGNGKVSTTINGEKVTLTVADITGGAANVDAATLQSSKN 300
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + T S N+ V + K
Sbjct: 301 VYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKGESKITVNGAEYTANATGDKVTLAGKT 360
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
++ N DA K + ++ ID+ + A +G+I +R +
Sbjct: 361 MFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGAIQNRFDSAITNL 420
Query: 397 KLMRDAVEKGVGRLVDA 413
+ R+ DA
Sbjct: 421 GNTVTNLNSARSRIEDA 437
>gi|2360968|gb|AAB69133.1| flagellin [Pseudomonas aeruginosa]
gi|2360970|gb|AAB69134.1| flagellin [Pseudomonas aeruginosa]
Length = 434
Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats.
Identities = 48/434 (11%), Positives = 119/434 (27%), Gaps = 36/434 (8%)
Query: 46 YWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERG 102
I+ + + L+ + G S A+ + ++ +++ I++
Sbjct: 1 GLQISNRLSNQISGLNVATRNANDGISLAQTAEGALQQSTNILQRIRDLALQSANGSNSD 60
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
D ++Q E+ Q++L I+ ++F G L G+++ + + +
Sbjct: 61 ADRAALQKEVAAQQAELTRISDTTTFGGRKLLDGSFGTTSFQVGSNAYETIDISLQNASA 120
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
Y + +S GT + V +K+I ++ D++ I+ K
Sbjct: 121 SAIGSYQVGSNGAGTVASVAGTATASGIASGTVNLVGGGQVKNIAIAAGDSAKAIAEKMD 180
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
A + ++ + + TS S +
Sbjct: 181 GAIPNLSARARTVFTADVSGVTGGSLNFDVTVGSNTVSLAGVTSTQDLADQLNSNSSKLG 240
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL----------- 331
+ I + + + + +
Sbjct: 241 ITASINDKGVLTITSATGENVKFGAQTGTATAGQVAVKVQGSDGKFEAAAKNVVAAGTAA 300
Query: 332 ----------------------PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ + + + + + ++ +D
Sbjct: 301 TTTIVTGYVQLNSPTAYSVSGTGTQASQVFGNASAAQKSSVASVDISTADGAQNAIAVVD 360
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ A +G++ +R D + + + R+ D D A+E+ LS Q Q
Sbjct: 361 NALAAIDAQRADLGAVQNRFKNTIDNLTNISENATNARSRIKDTDFAAETAALSKNQVLQ 420
Query: 430 QLAVQALSIVNNST 443
Q L+ N
Sbjct: 421 QAGTAILAQANQLP 434
>gi|73666327|gb|AAZ79840.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Enteritidis]
gi|73666329|gb|AAZ79841.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Enteritidis]
Length = 437
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 57/437 (13%), Positives = 115/437 (26%), Gaps = 53/437 (12%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTDL-------- 138
++ SIQ EI Q ++ ++ + FNG L D
Sbjct: 61 RVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGA 120
Query: 139 --------------------------GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
G A++ Y +D
Sbjct: 121 NDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDTYAAGADKYRVDI 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + + ++ + N ++ + T T + K +
Sbjct: 181 NSGAVVTDAAAPDKVYVNAANGQLTTDDAENNTAVDLFKTTKSTAGTAEAKAIAGAIKGG 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSG----------------TSGSKSPSVAAS 276
K + + +TT + + + +
Sbjct: 241 KEGDTFDYKGVTFTIDTKTGDDGNGKVSTTINGEKVTLTVADIATGATDVNAATLQSSKN 300
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + T S N+ V + K
Sbjct: 301 VYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKGESKITVNGAEYTANATGDKITLAGKT 360
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
++ N DA K + ++ ID+ + A +G+I +R +
Sbjct: 361 MFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGAIQNRFDSAITNL 420
Query: 397 KLMRDAVEKGVGRLVDA 413
+ R+ DA
Sbjct: 421 GNTVTNLNSARSRIEDA 437
>gi|217076162|ref|YP_002333878.1| flagellin [Thermosipho africanus TCF52B]
gi|217036015|gb|ACJ74537.1| flagellin [Thermosipho africanus TCF52B]
Length = 388
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A +++ N N+ +++SSGLR++ AAD+AA +I++ M+ L
Sbjct: 3 INHNLSALNAWRQISLTNSNMSKTLEKLSSGLRINRAADDAAGLAISEKMRGQIKGLDMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ D ++IQ+EI QL+ ++
Sbjct: 63 RKNAQDAISLIQTAEGALNEVHSILQRMRELAVQAASDTNTDVDRENIQAEIEQLRQEID 122
Query: 121 DIARGSSFNGENWLRTD 137
IAR + FN + L +
Sbjct: 123 RIARSTEFNTKKLLNGN 139
>gi|258626881|ref|ZP_05721686.1| Flagellin A [Vibrio mimicus VM603]
gi|258580837|gb|EEW05781.1| Flagellin A [Vibrio mimicus VM603]
Length = 402
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 81/230 (35%), Gaps = 4/230 (1%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
MT ++ TN SAM+A + L L +R+SSG R++ A D+AA I+ + + +
Sbjct: 24 MTINVNTNVSAMTAQRYLNKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRG 83
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQ 116
L G S A+ M+++ ++ I++ + +++ E T LQ
Sbjct: 84 LDVAMRNANDGISIAQTAEGAMNESTSILQRIRDLALQSANGTNSTAERQALNEEATALQ 143
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+L IA +SF G L G ++ I S + I
Sbjct: 144 DELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFVAEQ 203
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ G + K + + + ++ T
Sbjct: 204 AKTKEWGVPPTARDLKFEFTKKDGEAVVLDIMAKDGDDIEELATYINGQT 253
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/386 (13%), Positives = 105/386 (27%), Gaps = 10/386 (2%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++KA ++T ++ + + + +
Sbjct: 27 NVNTNVSAM-TAQRYLNKATGELNTSMERL-----SSGNRINSAKDDAAGLQISNRLTAQ 80
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + + T + +
Sbjct: 81 SRGLDVAMRNANDGISIAQTAEGAMNESTSILQRIRDLALQSANGTNSTAERQALNEEAT 140
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ S +AS I + + ++A + +
Sbjct: 141 ALQDELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFV 200
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A +K A + DI AT N T +
Sbjct: 201 AEQAKTKEWGVPPTARDLKFEFTKKDGEAVVLDIMAKDGDDIEELATYINGQTDLFKASV 260
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
K+ + + S + +G V + V
Sbjct: 261 DQDGKLQVFVAEPNIQGNFNISGGLATELGLNGGPGVK----TTVKDIDITSVGGSQNAV 316
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID +K + +G+ +R+ + +++ VE R+ D D A E+T+L+
Sbjct: 317 GIIDAALKYVDSQRADLGAKQNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKS 376
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ L+ +SL +
Sbjct: 377 QILQQAGTSILAQAKQLPNSAISLLQ 402
>gi|2271022|gb|AAC01552.1| flagellin [Vibrio cholerae]
Length = 379
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 81/230 (35%), Gaps = 4/230 (1%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
MT ++ TN SAM+A + L L +R+SSG R++ A D+AA I+ + + +
Sbjct: 1 MTINVNTNVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRG 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQ 116
L G S A+ M+++ ++ +++ ++ +++ E LQ
Sbjct: 61 LDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQ 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+L IA +SF G L G ++ I S + I
Sbjct: 121 DELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFIAEQ 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ G + K + + + ++ T
Sbjct: 181 PKTKEWGVPPTARDLKFEFTKKDGEAVVLDIIAKDGDDIEELATYINGQT 230
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 53/386 (13%), Positives = 105/386 (27%), Gaps = 10/386 (2%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++KA ++T ++ + + + +
Sbjct: 4 NVNTNVSAM-TAQRYLTKATGELNTSMERL-----SSGNRINSAKDDAAGLQISNRLTAQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + + + + +
Sbjct: 58 SRGLDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESV 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ S +AS I + + ++A + I
Sbjct: 118 ALQDELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFI 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A P +K A I DI AT N T +
Sbjct: 178 AEQPKTKEWGVPPTARDLKFEFTKKDGEAVVLDIIAKDGDDIEELATYINGQTDLFKASV 237
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
K+ + E S + +G V + V
Sbjct: 238 DQEGKLQIFVAEPNIEGNFNISGGLATELGLNGGPGVK----TTVQDIDITSVGGSQNAV 293
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID +K + +G+ +R+ + +++ VE R+ D D A E+T+L+
Sbjct: 294 GIIDAALKYVDSQRADLGAKQNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKS 353
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
QQ L+ +SL +
Sbjct: 354 HILQQAGTSILAQAKQLPNSAISLLQ 379
>gi|148910876|gb|ABR18491.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Senftenberg]
Length = 451
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 54/451 (11%), Positives = 118/451 (26%), Gaps = 53/451 (11%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+L +R+SS V A D+AA +IA S+ L+ S G S
Sbjct: 1 NKSQSSLSSAIERLSSLYCVKSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTT 60
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWL 134
+ +++ + + ++ SIQ EI Q ++ ++ + FNG L
Sbjct: 61 EGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVL 120
Query: 135 RTDL----------------------------------GSSTASIAKSVIGSFIRDDNGK 160
D G A++
Sbjct: 121 SQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDT 180
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
Y +D + + + ++ + N ++ + T T
Sbjct: 181 YAAGADKYRVDINSGAVVTDDAAPDKVYVNAANGQLTTDDAENNTAVNLFKTTKSTAGTD 240
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ K ++ K + + +TT +A
Sbjct: 241 EAKAIASAIKGGKEGDTFDYKGVSFTIDTKAGDDGNGTVSTTINGEKVTLTVADITAGAA 300
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+ ++ + S+ + + ++ + K + +
Sbjct: 301 NVNDATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKGESKITVNGAEYTAN 360
Query: 341 MVTLNITRHANTDAYN----------------EKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+T T + K + ++ ID+ + A +G+
Sbjct: 361 AAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGA 420
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
I +R + + R+ DAD
Sbjct: 421 IQNRFDSAITNLGNTVTNLNSARSRIEDADY 451
>gi|73666309|gb|AAZ79831.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Agona]
gi|73666311|gb|AAZ79832.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Agona]
gi|73666313|gb|AAZ79833.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Agona]
Length = 437
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 57/437 (13%), Positives = 115/437 (26%), Gaps = 53/437 (12%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTDL-------- 138
++ SIQ EI Q ++ ++ + FNG L D
Sbjct: 61 RVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGA 120
Query: 139 --------------------------GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
G A++ Y +D
Sbjct: 121 NDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDTYAAGADKYRVDI 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + + ++ + N ++ + T T + K +
Sbjct: 181 NSGAVVTDDAAPDKVYVNAANGQLTTDDAENNTAVNLFKTTKSTAGTDEAKAIAGAIKGG 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSG----------------TSGSKSPSVAAS 276
K + + +TT + + + +
Sbjct: 241 KEGDTFDYKGVTFTIDTKTGNDGNGKVSTTINGEKVTLTVADITGGAANVDAATLQSSKN 300
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + T S N+ V + K
Sbjct: 301 VYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKGESKITVNGAEYTANATGDKVTLAGKT 360
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
++ N DA K + ++ ID+ + A +G+I +R +
Sbjct: 361 MFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGAIQNRFDSAITNL 420
Query: 397 KLMRDAVEKGVGRLVDA 413
+ R+ DA
Sbjct: 421 GNTVTNLNSARSRIEDA 437
>gi|296135682|ref|YP_003642924.1| flagellin domain protein [Thiomonas intermedia K12]
gi|295795804|gb|ADG30594.1| flagellin domain protein [Thiomonas intermedia K12]
Length = 491
Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 66/484 (13%), Positives = 148/484 (30%), Gaps = 37/484 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++ L + +L ++S+G +++ ADN A ++I+Q ++ L+
Sbjct: 7 INTNVNALNTLNALGSTSSSLSTYIQQLSTGKQINGPADNPAGYAISQRFQTQINGLNQA 66
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S V A + +++ I+ +D S+Q ++QL +Q++
Sbjct: 67 VSNGNQAVSLVQTATGALQNETNLLQQIRTIAVQSANGSNTSSDRASLQGVVSQLLAQVQ 126
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FNG+N L + + + + +
Sbjct: 127 TISTQTQFNGQNILDGSFSGQQFQVGANANQVINVSIANSQANAVGVNTVGTSGTVYSGA 186
Query: 181 TDGTERYGLLDRNHKIKVEPQ----------------------------------VLKDI 206
G + +
Sbjct: 187 NGSVTNNGYGSAYTISTGAGNFTSGTVSISGSAGASGVAVTADESAANIAASFNAITQQT 246
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
V+ + T T S + + + T + ++
Sbjct: 247 GVTATANTSVAFTVTTGSYTFSLSNGTSGSPTNTVNISANVTSTDPTGLSGLVAAVNNST 306
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + +++ + + + S + A + L
Sbjct: 307 AQTGVTASVNSSNQLVLSQNQGENILISGFGGSGSLTAGTAPAITSGAGTALVQGFVQLQ 366
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
S + S + +++ + A+T + + +S ID+ I G +G+I
Sbjct: 367 STQGYSLANGSNIGLDSISKLQAASTVNVSTVEGSNQAISIIDSAINALNQQGGALGAIQ 426
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+RI + ++ + DA++A +T+LS Q QQ + L+ N+
Sbjct: 427 NRIQASVQNSQTTATNLQAAQSVVQDANIAQATTQLSKYQILQQAGISTLAQANSLQQSY 486
Query: 447 LSLF 450
L L
Sbjct: 487 LKLL 490
>gi|158321500|ref|YP_001514007.1| flagellin domain-containing protein [Alkaliphilus oremlandii
OhILAs]
gi|158141699|gb|ABW20011.1| flagellin domain protein [Alkaliphilus oremlandii OhILAs]
Length = 538
Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++A ++L + V +R+SSG +++ AAD+AA +I++ MK+ LS
Sbjct: 3 INHNIPALNAHRQLNRNSNVSAKVLERLSSGKKINRAADDAAGMAISEKMKAQIRGLSKA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ G S + A+ M++ ++ ++ D K+IQ E+ QL S++
Sbjct: 63 AQNTMDGISLIQTAEGAMNEVHSMLQRMRELAVQSANGTVTDQDRKAIQDEVNQLTSEVN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
IA G+ FN LR + G + + + NG + +
Sbjct: 123 RIANGTEFNTRKLLRGNEGPDSNTTVHRMSTGKPAIVNGAITSSVDLTS 171
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 47/379 (12%), Positives = 95/379 (25%), Gaps = 7/379 (1%)
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
S VD+ ++ ID SIQ + L + + D+ +G
Sbjct: 165 SSVDLTSKDLTIIIDGQERTVRL-----NNLDSGASIQDRLDALNNAIGDLGEAIITSGS 219
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
N + + + D G IT Y ST +
Sbjct: 220 NIEIRTTS--IGGNSSIYVDGSAKADFGLAGITAPVYGTAEINAGNAKSTVYFDGLPEAG 277
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
+ I + D Y S A+ D
Sbjct: 278 SSLVIGKDKVEFYDSSKGPYTGSNRPIDIYDSTASAYKDVTDIIQQINDMEFEGIKPGTG 337
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + + T + TV +
Sbjct: 338 DARIDTSVDGPDKGRLIFEAVETGFKGHAIFVEGTPKEFVTNLQVGPNQGQGFRLTVGDI 397
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ + + + ++ +S L+ + + + + ++ D
Sbjct: 398 RSFKLGISSSTPDGNTGVKGAAFHESMDVTDGLSASTIEHAINVSTEAYATSAITVFDNA 457
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I G +G+I +R+ ++ + + + R+ D DMA E + + Q
Sbjct: 458 IIKVAEMRGSLGAIQNRLEYTAANLENTGENLTAALSRIEDTDMALEMSEFTKYNILIQA 517
Query: 432 AVQALSIVNNSTARILSLF 450
L+ N +L L
Sbjct: 518 GTSMLAQANQRPQTVLQLL 536
>gi|56698282|ref|YP_168655.1| flagellin protein [Ruegeria pomeroyi DSS-3]
gi|56680019|gb|AAV96685.1| flagellin protein [Ruegeria pomeroyi DSS-3]
Length = 408
Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 104/451 (23%), Positives = 172/451 (38%), Gaps = 43/451 (9%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ +N NL Q+ +S+G V+ A DN+A W+I+++M+SD
Sbjct: 1 MSSILTNNGAMVALQTLKSVNMNLGQTQNAISTGKNVATAKDNSAVWAISKVMESDVKGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
A+ D++ LG S V +A+ D+++ +K KI A E D I +++T L+ Q+
Sbjct: 61 KAIKDSLSLGESTVAVARNAAETVTDLLTQMKGKIVAAQEDNVDRNKINADVTALKDQIS 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + FNG N + S++ + + + + +
Sbjct: 121 AVVGAAQFNGLNLVDGTAASASVLSSLDRDNAGNVTASSITVTGQNLSTGGYTAKAVFDA 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T+ ++ D + + + + T N T
Sbjct: 181 TNTDGVSADGQDTFGFSLDANGGTDDNGQIEFEPQGTAAYAAGDSFTIRLGDTEVNYTVT 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+T + A + + AA++ + + N +
Sbjct: 241 AEDIASTSQADVIAVGMKAAIEASGANVTVDYNAANSGRLVITNDGTDSLQVSGQF---- 296
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
S +
Sbjct: 297 ---------------------------------------SNANSGGLGALAAIDVSNSAG 317
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ I+T I + AA GS+ RI Q+ FI + D+++ G+G +VDADM S
Sbjct: 318 AAAALGSIETLIDTSIDAAAAFGSVQGRIETQKTFISNLTDSLKSGIGSMVDADMEEVSA 377
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQ QQQLAVQ+LSI N + ILSLFR
Sbjct: 378 RLQALQVQQQLAVQSLSIANQAPQSILSLFR 408
>gi|229840634|ref|ZP_04460793.1| lateral flagellin [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229697000|gb|EEO87047.1| lateral flagellin [Yersinia pestis biovar Orientalis str. PEXU2]
Length = 416
Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 62/454 (13%), Positives = 128/454 (28%), Gaps = 43/454 (9%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN SA +A L + R+S+G R++ ADNAA I M+ +
Sbjct: 3 LSIHTNASAKTAINSLSNEGLANAKSSQRLSTGFRINSPADNAAGLQITNRMEKFLNSAG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
I + + IA G+++++ ++ +K T D ++IQ E ++L +
Sbjct: 63 QAKQNIQESIAMLQIADGGLAESVKTLNAMKKLATQAANDTNSAADREAIQKEFSELGKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L++ + +N E
Sbjct: 123 LQNALNNTEYNSEKLFADGGKMR------------------------------------- 145
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
D +K++ + G + A L+
Sbjct: 146 ---KELNFQSGTDAESSLKLDLNSVIAELTESVTKPGLKANSGGTAEEKELARLEGLAKD 202
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
A + DI + A +
Sbjct: 203 AKSTAATTKSAETTLLVDDATGKGGKGGKGGKGGKGGKGGKGGNASIDIIIPAHKDTTGK 262
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
++ + + ++ ++++ +V + +K
Sbjct: 263 DVAEKKIASGTAITPANITSMADAKAYWDKQEIETPKAVNEYVVKHSADSGVMNMQLADK 322
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+ + I A +G+ +R+ + + M + +G + D D A E
Sbjct: 323 DLAMKADKKLSDVIDAYGAFRATLGANQNRLQSSSNNLDNMISNTAQALGSIKDTDFADE 382
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + Q +V L N +T I +L +G
Sbjct: 383 MKNHAQSEMLMQSSVMMLKKANAATQLISTLLQG 416
>gi|254849317|ref|ZP_05238667.1| flagellin core protein A [Vibrio cholerae MO10]
gi|254845022|gb|EET23436.1| flagellin core protein A [Vibrio cholerae MO10]
Length = 402
Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 81/230 (35%), Gaps = 4/230 (1%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
MT ++ TN SAM+A + L L +R+SSG R++ A D+AA I+ + + +
Sbjct: 24 MTINVNTNVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRG 83
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQ 116
L G S A+ M+++ ++ +++ ++ +++ E LQ
Sbjct: 84 LDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQ 143
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+L IA +SF G L G ++ I S + I
Sbjct: 144 DELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFIAEQ 203
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ G + K + + + ++ T
Sbjct: 204 PKTKEWGVPPTARDLKFEFTKKDGEAVVLDIIAKDGDDIEELATYINGQT 253
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 54/386 (13%), Positives = 106/386 (27%), Gaps = 10/386 (2%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++KA ++T ++ + + + +
Sbjct: 27 NVNTNVSAM-TAQRYLTKATGELNTSMERL-----SSGNRINSAKDDAAGLQISNRLTAQ 80
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + + + + +
Sbjct: 81 SRGLDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESV 140
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ S +AS I + + ++A + I
Sbjct: 141 ALQDELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFI 200
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A P +K A I DI AT N T +
Sbjct: 201 AEQPKTKEWGVPPTARDLKFEFTKKDGEAVVLDIIAKDGDDIEELATYINGQTDLFKASV 260
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
K+ + E S + +G V + V
Sbjct: 261 DQEGKLQIFVAEPNIEGNFNISGGLATELGLNGGPGVK----TTVQDIDITSVGGSQNAV 316
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID +K + +G+ +R+ + +++ VE R+ D D A E+T+L+
Sbjct: 317 GIIDAALKYVDSQRADLGAKQNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKS 376
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ L+ +SL +
Sbjct: 377 QILQQAGTSILAQAKQLPNSAISLLQ 402
>gi|254225809|ref|ZP_04919414.1| flagellin core protein A [Vibrio cholerae V51]
gi|125621715|gb|EAZ50044.1| flagellin core protein A [Vibrio cholerae V51]
Length = 379
Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 83/230 (36%), Gaps = 4/230 (1%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
MT ++ TN SAM+A + L +L +R+SSG R++ A D+AA I+ + + +
Sbjct: 1 MTINVNTNVSAMTAQRYLTKATGDLNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRG 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQ 116
L G S A+ M+++ ++ +++ ++ +++ E LQ
Sbjct: 61 LDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSDSERQALDEESRALQ 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+L IA +SF G L G ++ I S + I +
Sbjct: 121 DELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFVSEQ 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ G + K + + + ++ T
Sbjct: 181 AKTKEWGVPPTARDLKFEFTKKDGEAVVLDIMAKDGDDIEELATYINGQT 230
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/365 (9%), Positives = 83/365 (22%), Gaps = 2/365 (0%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQL--RDIARGSSFNGENWLRTDLGSSTASIA 146
K T + + S + I + I+ + ++
Sbjct: 15 QRYLTKATGDLNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISI 74
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + +Q DS + ++ ++
Sbjct: 75 AQTAEGAMNESTSILQRMRDLALQSANGTNSDSERQALDEESRALQDELNRIAETTSFGG 134
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ + G S + + + + D G + +
Sbjct: 135 RKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFVSEQAKTKEWGVPPTARD 194
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + + + E
Sbjct: 195 LKFEFTKKDGEAVVLDIMAKDGDDIEELATYINGQTDLFKASVDEEGKLQIFVAEPNIEG 254
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + + V ID +K + +G+
Sbjct: 255 NFNISGGLATELGLNGGPGVKTTVQDIDITSVGGSQNAVGIIDAALKYVDSQRADLGAKQ 314
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R+ + +++ VE R+ D D A E+T+L+ Q QQ L+
Sbjct: 315 NRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKSQILQQAGTSILAQAKQLPNSA 374
Query: 447 LSLFR 451
+SL +
Sbjct: 375 ISLLQ 379
>gi|73666247|gb|AAZ79800.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Livingstone]
gi|73666249|gb|AAZ79801.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Livingstone]
Length = 438
Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 56/437 (12%), Positives = 108/437 (24%), Gaps = 54/437 (12%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANGTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIR--------------DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
I + +D T + T + +
Sbjct: 121 NDGETIDIDLKEISSKTLGLDKLNVQDAYTPKETAVTVDKTTYKNGTDTITAQSNTDIQT 180
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
DI + + D
Sbjct: 181 AIGGGATGVTGADIKFKDGQYYLDVKGGASAGVYKATYDETYKKVNIDTTDKTPLATAEA 240
Query: 253 PAAPAAPNTTSGT-------------------------------------SGSKSPSVAA 275
A T K+ V
Sbjct: 241 TAIRGTATITHNQIAEVTKEGVDTTTVAAQLAAAGVTGADKDNTSLVKLSFEDKNGKVID 300
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
++MG+ K + + + A V T +
Sbjct: 301 GGYALKMGDDFYAATYDEKTGTITAKTTSYTDGAGVAQTGAVKFGGANGKSEVVTATDGK 360
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
S + + R E + ID + A +G++ +R +
Sbjct: 361 TYLASDLDKHNFRTDGELKEVNTDKTENPLQKIDAALAQVDALRSDLGAVQNRFNSAITN 420
Query: 396 IKLMRDAVEKGVGRLVD 412
+ + + R+ D
Sbjct: 421 LGNTVNNLSSARSRIED 437
>gi|317051512|ref|YP_004112628.1| flagellin domain-containing protein [Desulfurispirillum indicum S5]
gi|316946596|gb|ADU66072.1| flagellin domain protein [Desulfurispirillum indicum S5]
Length = 840
Score = 142 bits (356), Expect = 2e-31, Method: Composition-based stats.
Identities = 49/398 (12%), Positives = 114/398 (28%), Gaps = 18/398 (4%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ + N +++A LR + L +R+SSGLR++ A+D+A+ +I++ M+ L
Sbjct: 3 MSVLYNNLPSLNAQNNLRVNSSALSNSIERLSSGLRINRASDDASGLAISEKMRGQISGL 62
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A+A +++ ++ ++ D + IQ E+ QL+
Sbjct: 63 NRAVANAQDGISLIQTAEAALNETTAILQRMRELAIQAGNGTMTSDDRQHIQREVDQLKH 122
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ I+ + FN + L D + ++ +++ + IRD + +L
Sbjct: 123 EIDRISTSTEFNTKKLLNGDATARWSTSNPNLMEAVIRDRVVSGNYQLDVTAKVGKNQVL 182
Query: 178 DSSTD-------------GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
S+ N + + + + L
Sbjct: 183 KSNIMALREGAFAGDVLTANGVALTGQTNSSGIAGIYAAEGVRTGGINERTYVVNVLSNL 242
Query: 225 ATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGN 284
+ + + + + S + + M
Sbjct: 243 SGGGANVISGVSTLGGTDGVNTLTTGGVGVNGFYQQSGSNWGIASTGGFGPMGNVDGMNR 302
Query: 285 SDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTL 344
+ + +D + P +
Sbjct: 303 FSSAGAFVVSGYHGYVEIEFIKDMHLSAGANVSDAARVRFIDVKTGEPTAWTTIDIAGGE 362
Query: 345 NITRHANTDAYNEKLAMEE--MVSFIDTQIKCATAAAG 380
A+ + M+ D + AA
Sbjct: 363 LELDSTAIFGAGANFALIDGSMIKTGDKMLLSVDAARS 400
Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 61/200 (30%)
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
L + T GS I+ + S + T
Sbjct: 640 NLYSVTVRDAHTGRPVGSDVVGDGVMKDTIQGVDVHFKGNIGIGASFNETLQKFDFTADT 699
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
T Y +S+ + + + +E V ID
Sbjct: 700 DPATMYLHLVDSSMSFQIGANEGQTMRANIAQIDVKSLGLENVYLVSQELAQEAVGRIDK 759
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
I ++ K+G+IS+R+ + + + + ++ R+ D ++A E ++ + Q Q
Sbjct: 760 AITQVSSERAKMGAISNRLDHTINSLSIAAENLQAAESRIRDVNVAKEMSQFTLNQMLTQ 819
Query: 431 LAVQALSIVNNSTARILSLF 450
A L+ N I+ L
Sbjct: 820 AAQSMLAQANAMPQGIMQLL 839
>gi|148910880|gb|ABR18493.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Senftenberg]
Length = 453
Score = 142 bits (356), Expect = 2e-31, Method: Composition-based stats.
Identities = 55/453 (12%), Positives = 120/453 (26%), Gaps = 53/453 (11%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+L +R+SS V A D+AA +IA S+ L+ S G S
Sbjct: 1 NKSQSSLSSAIERLSSLYCVKSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTT 60
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWL 134
+ +++ + + ++ SIQ EI Q ++ ++ + FNG L
Sbjct: 61 EGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVL 120
Query: 135 RTDL----------------------------------GSSTASIAKSVIGSFIRDDNGK 160
D G A++
Sbjct: 121 SQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDT 180
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
Y +D + + + ++ + N ++ + T T
Sbjct: 181 YAAGADKYRVDINSGAVVTDDAAPDKVYVNAANGQLTTDDAENNTAVNLFKTTKSTAGTD 240
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ K ++ K + + +TT +A
Sbjct: 241 EAKAIASAIKGGKEGDTFDYKGVSFTIDTKAGDDGNGTVSTTINGEKVTLTVADITAGAA 300
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+ ++ + S+ + + ++ + K + +
Sbjct: 301 NVNDATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKGESKITVNGAEYTAN 360
Query: 341 MVTLNITRHANTDAYN----------------EKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+T T + K + ++ ID+ + A +G+
Sbjct: 361 AAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGA 420
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
I +R + + R+ DAD +S
Sbjct: 421 IQNRFDSAITNLGNTVTNLNSARSRIEDADYSS 453
>gi|262170833|ref|ZP_06038511.1| flagellin protein FlaC [Vibrio mimicus MB-451]
gi|261891909|gb|EEY37895.1| flagellin protein FlaC [Vibrio mimicus MB-451]
Length = 379
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 81/230 (35%), Gaps = 4/230 (1%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
MT ++ TN SAM+A + L L +R+SSG R++ A D+AA I+ + + +
Sbjct: 1 MTINVNTNVSAMTAQRYLNKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRG 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQ 116
L G S A+ M+++ ++ I++ + +++ E T LQ
Sbjct: 61 LDVAMRNANDGISIAQTAEGAMNESTSILQRIRDLALQSANGTNSTAERQALNEEATALQ 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+L IA +SF G L G ++ I S + I
Sbjct: 121 DELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFVAEQ 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ G + K + + + ++ T
Sbjct: 181 AKTKEWGVPPTARDLKFEFTKKDGEAVVLDIMAKDGDDIEELATYINGQT 230
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/386 (13%), Positives = 105/386 (27%), Gaps = 10/386 (2%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++KA ++T ++ + + + +
Sbjct: 4 NVNTNVSAM-TAQRYLNKATGELNTSMERL-----SSGNRINSAKDDAAGLQISNRLTAQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + + T + +
Sbjct: 58 SRGLDVAMRNANDGISIAQTAEGAMNESTSILQRIRDLALQSANGTNSTAERQALNEEAT 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ S +AS I + + ++A + +
Sbjct: 118 ALQDELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFV 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A +K A + DI AT N T +
Sbjct: 178 AEQAKTKEWGVPPTARDLKFEFTKKDGEAVVLDIMAKDGDDIEELATYINGQTDLFKASV 237
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
K+ + + S + +G V + V
Sbjct: 238 DQDGKLQVFVAEPNIQGNFNISGGLATELGLNGGPGVK----TTVKDIDITSVGGSQNAV 293
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID +K + +G+ +R+ + +++ VE R+ D D A E+T+L+
Sbjct: 294 GIIDAALKYVDSQRADLGAKQNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKS 353
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ L+ +SL +
Sbjct: 354 QILQQAGTSILAQAKQLPNSAISLLQ 379
>gi|291276933|ref|YP_003516705.1| flagellin [Helicobacter mustelae 12198]
gi|729512|sp|Q07910|FLAB_HELMU RecName: Full=Flagellin B; AltName: Full=Flagellin N
gi|305391|gb|AAA25017.1| flagellin [Helicobacter mustelae]
gi|290964127|emb|CBG39972.1| flagellin [Helicobacter mustelae 12198]
Length = 514
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 74/510 (14%), Positives = 147/510 (28%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A N N+ +++SSGLR++ AAD+A+ +IA ++S + +L
Sbjct: 5 INTNIAALNAHSIGVQTNRNIAGSLEKLSSGLRINKAADDASGMAIADSLRSQSESLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ IA M + + ++ TIK K + G +S+QS+I +L +L
Sbjct: 65 VRNANDAIGMIQIADKAMDEQLKILDTIKAKAIQAAQDGQSQESRRSLQSDIRRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGS----FIRDDNGKVQITTIDYYLDPETVL 176
+IA +SFNG+ L + I + + K+ ++ +
Sbjct: 125 NIANTTSFNGQQMLSGAFTNKEFQIGAYSNTTVKASIGPTSSDKIGHIRMETASFSGVGM 184
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
L S+ L+ V L+++ +S +G + + + ++A
Sbjct: 185 LASAGGNNLTEVALNFKATDGVNSFELENVRISTSAGTGIGALSEVINRFSDKLGIRATY 244
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
+ K+ S I + V A+ +
Sbjct: 245 NVMATGTSPVMSGTVRGLVINGVRIGTVNEVRKNDSDGRLINAINSVKNQTGVEASLDIT 304
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + V + G + R N
Sbjct: 305 GRINLVSLDGRAISVHADGEASHVFGEGNFTGISGNNHAIVGRLTLIRTDARDIIVSGVN 364
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISS----------------------------- 387
+ G G+ +
Sbjct: 365 FSHIGLHSAQGVAETTANLRQLRGMFGADIASAAGANANKAQADINRQGIGAGVTSLKGA 424
Query: 388 ------------RIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTR 421
++ + ++ + + + D D A+ES
Sbjct: 425 MIVMDMVDSARTQLDKVRSDMGSVQIQLVSTINNISTTQVNVKAAESQIRDVDFAAESAN 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q AL+ N +L L +
Sbjct: 485 FSKNNILAQSGSFALAQANAVQQNVLRLLQ 514
>gi|15642187|ref|NP_231819.1| flagellin [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121586233|ref|ZP_01676023.1| flagellin core protein A [Vibrio cholerae 2740-80]
gi|121726531|ref|ZP_01679780.1| flagellin core protein A [Vibrio cholerae V52]
gi|147674518|ref|YP_001217705.1| flagellin [Vibrio cholerae O395]
gi|153817119|ref|ZP_01969786.1| flagellin core protein A [Vibrio cholerae NCTC 8457]
gi|153820885|ref|ZP_01973552.1| flagellin core protein A [Vibrio cholerae B33]
gi|227082312|ref|YP_002810863.1| flagellin core protein A [Vibrio cholerae M66-2]
gi|229507734|ref|ZP_04397239.1| flagellin protein FlaC [Vibrio cholerae BX 330286]
gi|229512071|ref|ZP_04401550.1| flagellin protein FlaC [Vibrio cholerae B33]
gi|229519207|ref|ZP_04408650.1| flagellin protein FlaC [Vibrio cholerae RC9]
gi|229607238|ref|YP_002877886.1| flagellin [Vibrio cholerae MJ-1236]
gi|255747112|ref|ZP_05421057.1| flagellin protein FlaC [Vibrio cholera CIRS 101]
gi|262161344|ref|ZP_06030454.1| flagellin protein FlaC [Vibrio cholerae INDRE 91/1]
gi|262167785|ref|ZP_06035487.1| flagellin protein FlaC [Vibrio cholerae RC27]
gi|298500433|ref|ZP_07010238.1| flagellin core protein A [Vibrio cholerae MAK 757]
gi|172044515|sp|P0C6C3|FLAA_VIBCH RecName: Full=Flagellin A; AltName: Full=Flagellin core protein
gi|172047624|sp|A5F672|FLAA_VIBC3 RecName: Full=Flagellin A; AltName: Full=Flagellin core protein
gi|2443635|gb|AAC33160.1| flagellin core protein A [Vibrio cholerae]
gi|9656743|gb|AAF95333.1| flagellin core protein A [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121549499|gb|EAX59525.1| flagellin core protein A [Vibrio cholerae 2740-80]
gi|121630984|gb|EAX63363.1| flagellin core protein A [Vibrio cholerae V52]
gi|126512387|gb|EAZ74981.1| flagellin core protein A [Vibrio cholerae NCTC 8457]
gi|126521677|gb|EAZ78900.1| flagellin core protein A [Vibrio cholerae B33]
gi|146316401|gb|ABQ20940.1| flagellin core protein A [Vibrio cholerae O395]
gi|227010200|gb|ACP06412.1| flagellin core protein A [Vibrio cholerae M66-2]
gi|227014084|gb|ACP10294.1| flagellin core protein A [Vibrio cholerae O395]
gi|229343896|gb|EEO08871.1| flagellin protein FlaC [Vibrio cholerae RC9]
gi|229352036|gb|EEO16977.1| flagellin protein FlaC [Vibrio cholerae B33]
gi|229355239|gb|EEO20160.1| flagellin protein FlaC [Vibrio cholerae BX 330286]
gi|229369893|gb|ACQ60316.1| flagellin protein FlaC [Vibrio cholerae MJ-1236]
gi|255735514|gb|EET90914.1| flagellin protein FlaC [Vibrio cholera CIRS 101]
gi|262023850|gb|EEY42549.1| flagellin protein FlaC [Vibrio cholerae RC27]
gi|262028655|gb|EEY47309.1| flagellin protein FlaC [Vibrio cholerae INDRE 91/1]
gi|297541126|gb|EFH77180.1| flagellin core protein A [Vibrio cholerae MAK 757]
Length = 379
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 81/230 (35%), Gaps = 4/230 (1%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
MT ++ TN SAM+A + L L +R+SSG R++ A D+AA I+ + + +
Sbjct: 1 MTINVNTNVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRG 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQ 116
L G S A+ M+++ ++ +++ ++ +++ E LQ
Sbjct: 61 LDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQ 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+L IA +SF G L G ++ I S + I
Sbjct: 121 DELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFIAEQ 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ G + K + + + ++ T
Sbjct: 181 PKTKEWGVPPTARDLKFEFTKKDGEAVVLDIIAKDGDDIEELATYINGQT 230
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 54/386 (13%), Positives = 106/386 (27%), Gaps = 10/386 (2%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++KA ++T ++ + + + +
Sbjct: 4 NVNTNVSAM-TAQRYLTKATGELNTSMERL-----SSGNRINSAKDDAAGLQISNRLTAQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + + + + +
Sbjct: 58 SRGLDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESV 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ S +AS I + + ++A + I
Sbjct: 118 ALQDELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFI 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A P +K A I DI AT N T +
Sbjct: 178 AEQPKTKEWGVPPTARDLKFEFTKKDGEAVVLDIIAKDGDDIEELATYINGQTDLFKASV 237
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
K+ + E S + +G V + V
Sbjct: 238 DQEGKLQIFVAEPNIEGNFNISGGLATELGLNGGPGVK----TTVQDIDITSVGGSQNAV 293
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID +K + +G+ +R+ + +++ VE R+ D D A E+T+L+
Sbjct: 294 GIIDAALKYVDSQRADLGAKQNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKS 353
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ L+ +SL +
Sbjct: 354 QILQQAGTSILAQAKQLPNSAISLLQ 379
>gi|21231389|ref|NP_637306.1| flagellin [Xanthomonas campestris pv. campestris str. ATCC 33913]
gi|188991633|ref|YP_001903643.1| flagellin [Xanthomonas campestris pv. campestris str. B100]
gi|21113054|gb|AAM41230.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|86211116|gb|ABC87255.1| flagellin [Xanthomonas campestris pv. campestris]
gi|86211118|gb|ABC87256.1| flagellin [Xanthomonas campestris pv. campestris]
gi|86211122|gb|ABC87258.1| flagellin [Xanthomonas campestris pv. campestris]
gi|86211126|gb|ABC87260.1| flagellin [Xanthomonas campestris pv. campestris]
gi|167733393|emb|CAP51594.1| flagellin A (flagellin core protein) [Xanthomonas campestris pv.
campestris]
Length = 399
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 52/449 (11%), Positives = 119/449 (26%), Gaps = 53/449 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + ++ + ++SSG R++ A+ +AA +I++ + L
Sbjct: 4 VINTNVMSLNAQRNLNTNSSSMALSIQQLSSGKRITSASVDAAGLAISERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
S + + +A+ +++ G + S
Sbjct: 64 ASR---NANDGISLAQTAEGAMVEI----------GNNLQRIRELSVQSANATNSATDRE 110
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A S + + T+ ++ +V V + +
Sbjct: 111 ALNSEVKQLTSEIDRVANQTSFNGTKLLNGDFSGALFQVGADAGQTIGINSIVDANVDSL 170
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
G + + + K A ++
Sbjct: 171 GKANFAASVSGAGVTGAATASGSLSGITLAFKDASGAAKSVAVADIKIASGDTAADINKK 230
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
A A TSG +S T + G S T
Sbjct: 231 VASAINDKLDQTGMYASIDTSGNVKLESLKAGQDFTSLSGGTSGAAGITAGAGIQT---- 286
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
S + + ++ + +
Sbjct: 287 ------------------------------------ASAASGSTASTLSSLDISTFSGAQ 310
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ + +D + ++ +G++ +R + + + R+ D D A + L
Sbjct: 311 KALEIVDKALTSVNSSRADMGAVQNRFTSTIANLAATSENLTASRSRIADTDYAKTTAEL 370
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q QQ L+ + +LSL +
Sbjct: 371 TRTQILQQAGTAMLAQAKSVPQNVLSLLQ 399
>gi|95929887|ref|ZP_01312628.1| flagellin-like [Desulfuromonas acetoxidans DSM 684]
gi|95134183|gb|EAT15841.1| flagellin-like [Desulfuromonas acetoxidans DSM 684]
Length = 600
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I TN ++++A + L +L R+SSGLR++ A D+AA +I+ M + L+
Sbjct: 3 LTINTNVASLNAQRNLGKSQTDLNQSMQRLSSGLRINSAKDDAAGLAISDRMTAQITGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
+ G S A+ + ++ +++ I+ TD +S+Q+E+ QL ++
Sbjct: 63 QAARNANDGISLAQTAEGALQESTNILQRIRELGVQSANDTNSATDRESLQAEVDQLIAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIA 146
L IA + FNG+N L + +T +
Sbjct: 123 LDRIADTTQFNGKNLLDGSMTDATFQVG 150
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 45/399 (11%), Positives = 101/399 (25%), Gaps = 3/399 (0%)
Query: 54 KSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEIT 113
GA + ++G + ++ ++ D +
Sbjct: 205 DQAIGATDGTATSLGDAINTAAGEDIA--TVVNSLTFGFE-DVTLEVTPGDQEVNTVTFG 261
Query: 114 QLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE 173
L + A + TA + ++I D +T +
Sbjct: 262 ALANTGVGDATAIVNGVTATGDGTGNAITADELAAGFAAYIADPVANPTVTGASGGVVTF 321
Query: 174 TVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233
D S D + ++
Sbjct: 322 GGSNDDSLFTAAAGATGADLVYTSAATSGDVANISVSGDVAPGVTETTPGTDDAVTGTYV 381
Query: 234 AANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATT 293
D V TT+G + S + + +
Sbjct: 382 LTVDGADIGVADGGDGVINAQDVVDALTTAGYTASVDADNNITLANSDGADITLQEDLGG 441
Query: 294 KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD 353
N+ + A V + + + + + N T +
Sbjct: 442 TNTGVGFADTAATAGAPVTHGGQISLDSNADITLEEGTAGALALAGLDEVGNPTTTIDQV 501
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ + +S +D + G +G++ +R ++ + + + R++DA
Sbjct: 502 DISTQEGATMAISSVDAALMQIDTIRGDLGAVQNRFESTIANLQNVSENLSAARSRILDA 561
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
D+A E++ ++ QQ V L+ N + LSL +G
Sbjct: 562 DIAEETSNMTKQNILQQAGVSILAQANQAPQLALSLLQG 600
>gi|189339486|gb|ABD33736.2| flagellin [Bacillus thuringiensis serovar pondicheriensis]
Length = 426
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 52/448 (11%), Positives = 120/448 (26%), Gaps = 57/448 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++
Sbjct: 36 INTNINSMRTQEYMRQNQTKMSNAMDRLSSGKRINNASDDAAGLAIATRMRAR------- 88
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ G+ A + + I A
Sbjct: 89 --------------ENGLGVAANNTQDGMSLI-------------------------RTA 109
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ + N L + S + + + + + +
Sbjct: 110 DSAMNSVSNILLRMRDLANQSANGTNTDDNQKALDKEFSALKEQIDYISKNTEFNDKKLL 169
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + I+ + L + T D K
Sbjct: 170 NGENKTIAIQTLDNADTT-----------KQININLADSSTSALQIDKLTISGKTTDTTK 218
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A + K+ + + + G+ S
Sbjct: 219 TQTITVTDDEIKAAKTDIDEFNDAKKALADLKAESAPSKGDGSSDDEIKEAVSNFKKSFE 278
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + L K G + + + + +
Sbjct: 279 KIQKFMNDSDIKTVQTEIEKFDAAAPALDKAKGMGIAFTSAMDPKAGTITKAATRQNASD 338
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ ID ++ + +G+ +R+ + +K ++ ++ DADMA E + ++
Sbjct: 339 AIKSIDAALETIASNRATLGATLNRLDFNVNNLKSQSSSMAAAASQIEDADMAKEMSEMT 398
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + LS N + + L +
Sbjct: 399 KFKILNEAGISMLSQANQTPQMVSKLLQ 426
>gi|161898984|ref|YP_201220.2| flagellin [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 399
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 68/452 (15%), Positives = 137/452 (30%), Gaps = 59/452 (13%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + +L + ++SSG R++ + +AA +IA+ + L
Sbjct: 4 VINTNVMSLNAQRNLNTNSSSLALSIQQLSSGKRITSFSVDAAGGAIAERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S A+ M + + + I+ TD +++ SE+ QL S++
Sbjct: 64 ASRNANDGISLSQTAEGAMQEIGNNLQRIRELSVQSANATNSSTDREALNSEVKQLTSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A +SFNG L + +
Sbjct: 124 DRVANQTSFNGTKLLDGSFSGALFQVGA-------------------------------- 151
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ ++ ++ + +V A + + + K A+ +
Sbjct: 152 ---DAGQTIGINSIADANIDTLGKANFAAAVSAAGVSGTATASGSVSGISLSFKDASGSA 208
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + K A+ G+ I ++ +
Sbjct: 209 KSITIADVKVGAGDTAADVNKKVASAINDKLDQTGMYASIKSDGSVQIESLKAGQDFTSL 268
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G +++ VG S + S + L I A T + +
Sbjct: 269 SAGTSSAAGITVGAGITTASAASGSTASTLGSLDISTFSGAQQALEIVDKALTTVNSSRA 328
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
M + + + I +A + + + SRI D A +
Sbjct: 329 DMGAVQNRFTSTIANLSATSENLSASRSRIADT---------------------DYAKST 367
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ L+ + +LSL +
Sbjct: 368 AELTRTQILQQAGTAMLAQAKSVPQNVLSLLQ 399
>gi|73666315|gb|AAZ79834.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Montevideo]
gi|73666317|gb|AAZ79835.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Montevideo]
Length = 437
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 56/437 (12%), Positives = 114/437 (26%), Gaps = 53/437 (12%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTD--------- 137
++ SIQ EI Q ++ ++ + FNG L D
Sbjct: 61 RVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGA 120
Query: 138 -------------------------LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
G A++ Y +D
Sbjct: 121 NDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDTYAAGANKYRVDI 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + + ++ + N ++ + T + K +
Sbjct: 181 NSGAVVTDDAAPDKVYVNAANGQLTTDDAENNTAVNLFKTTKSAAGTDEAKAIAGAIKGG 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSG----------------TSGSKSPSVAAS 276
K + + +TT + + + +
Sbjct: 241 KEGDTFDYKGVTFTIDTKTGDDGNGKVSTTINGEKVTLTVADIATGATDVNAATLQSSKN 300
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + T S N+ V + K
Sbjct: 301 VYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKGESKITVNGAEYTANAAGDKVTLAGKT 360
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
++ N DA K + ++ ID+ + A +G+I +R +
Sbjct: 361 MFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGAIQNRFDSAITNL 420
Query: 397 KLMRDAVEKGVGRLVDA 413
+ R+ DA
Sbjct: 421 GNTVTNLNSARSRIEDA 437
>gi|148910878|gb|ABR18492.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Senftenberg]
Length = 454
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 55/453 (12%), Positives = 120/453 (26%), Gaps = 53/453 (11%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+L +R+SS V A D+AA +IA S+ L+ S G S
Sbjct: 1 NKSQSSLSSAIERLSSLYCVKSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTT 60
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWL 134
+ +++ + + ++ SIQ EI Q ++ ++ + FNG L
Sbjct: 61 EGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVL 120
Query: 135 RTDL----------------------------------GSSTASIAKSVIGSFIRDDNGK 160
D G A++
Sbjct: 121 SQDNQMKIQVGANDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDT 180
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
Y +D + + + ++ + N ++ + T T
Sbjct: 181 YAAGADKYRVDINSGAVVTDDAAPDKVYVNAANGQLTTDDAENNTAVNLFKTTKSTAGTD 240
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ K ++ K + + +TT +A
Sbjct: 241 EAKAIASAIKGGKEGDTFDYKGVSFTIDTKAGDDGNGTVSTTINGEKVTLTVADITAGAA 300
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+ ++ + S+ + + ++ + K + +
Sbjct: 301 NVNDATLQSSKNVYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKGESKITVNGAEYTAN 360
Query: 341 MVTLNITRHANTDAYN----------------EKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+T T + K + ++ ID+ + A +G+
Sbjct: 361 AAGDKVTLAGKTMFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGA 420
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
I +R + + R+ DAD +S
Sbjct: 421 IQNRFDSAITNLGNTVTNLNSARSRIEDADYSS 453
>gi|254434594|ref|ZP_05048102.1| Bacterial flagellin N-terminus domain protein [Nitrosococcus oceani
AFC27]
gi|207090927|gb|EDZ68198.1| Bacterial flagellin N-terminus domain protein [Nitrosococcus oceani
AFC27]
Length = 437
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 84/209 (40%), Gaps = 3/209 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I TN ++++A + L L+ +R+SSG R+++A D+AA +I + M S L+
Sbjct: 4 TINTNIASLNAQRNLNSSQGALQTSLERLSSGFRINNAKDDAAGLAITERMTSQIRGLAQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
+ S A+ G+ ++ +++ ++ +D ++Q E++QLQS+L
Sbjct: 64 ATRNANDAISVTQTAEGGLKESSNILQRMRELAVQSANDTNSDSDRANLQKEVSQLQSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A ++FNG+N L I + S N T + T +
Sbjct: 124 NRLADSTTFNGKNLLDGSFTGQKFQIGANANESIGFSINSARATTLGEQLGKSITNVGAG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ G + V
Sbjct: 184 LAVAADTSGGNTVAAQNITVNGSTGSKMV 212
>gi|153213626|ref|ZP_01948899.1| flagellin core protein A [Vibrio cholerae 1587]
gi|153825341|ref|ZP_01978008.1| flagellin core protein A [Vibrio cholerae MZO-2]
gi|183179573|ref|ZP_02957784.1| flagellin core protein A [Vibrio cholerae MZO-3]
gi|229513833|ref|ZP_04403295.1| flagellin protein FlaC [Vibrio cholerae TMA 21]
gi|229522138|ref|ZP_04411555.1| flagellin protein FlaC [Vibrio cholerae TM 11079-80]
gi|229524184|ref|ZP_04413589.1| flagellin protein FlaC [Vibrio cholerae bv. albensis VL426]
gi|254286496|ref|ZP_04961453.1| flagellin core protein A [Vibrio cholerae AM-19226]
gi|262191681|ref|ZP_06049857.1| flagellin protein FlaC [Vibrio cholerae CT 5369-93]
gi|297580835|ref|ZP_06942760.1| flagellin core protein A [Vibrio cholerae RC385]
gi|124115825|gb|EAY34645.1| flagellin core protein A [Vibrio cholerae 1587]
gi|149741025|gb|EDM55094.1| flagellin core protein A [Vibrio cholerae MZO-2]
gi|150423445|gb|EDN15389.1| flagellin core protein A [Vibrio cholerae AM-19226]
gi|183012984|gb|EDT88284.1| flagellin core protein A [Vibrio cholerae MZO-3]
gi|229337765|gb|EEO02782.1| flagellin protein FlaC [Vibrio cholerae bv. albensis VL426]
gi|229341063|gb|EEO06068.1| flagellin protein FlaC [Vibrio cholerae TM 11079-80]
gi|229349014|gb|EEO13971.1| flagellin protein FlaC [Vibrio cholerae TMA 21]
gi|262032420|gb|EEY50982.1| flagellin protein FlaC [Vibrio cholerae CT 5369-93]
gi|297534661|gb|EFH73497.1| flagellin core protein A [Vibrio cholerae RC385]
Length = 379
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 81/230 (35%), Gaps = 4/230 (1%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
MT ++ TN SAM+A + L L +R+SSG R++ A D+AA I+ + + +
Sbjct: 1 MTINVNTNVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRG 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQ 116
L G S A+ M+++ ++ +++ ++ +++ E LQ
Sbjct: 61 LDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQ 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+L IA +SF G L G ++ I S + I
Sbjct: 121 DELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFIAEQ 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ G + K + + + ++ T
Sbjct: 181 PKTKEWGVPPTARDLKFEFTKKDGEAVVLDIMAKDGDDIEELATYINGQT 230
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 53/386 (13%), Positives = 106/386 (27%), Gaps = 10/386 (2%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++KA ++T ++ + + + +
Sbjct: 4 NVNTNVSAM-TAQRYLTKATGELNTSMERL-----SSGNRINSAKDDAAGLQISNRLTAQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + + + + +
Sbjct: 58 SRGLDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESV 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ S +AS I + + ++A + I
Sbjct: 118 ALQDELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFI 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A P +K A + DI AT N T +
Sbjct: 178 AEQPKTKEWGVPPTARDLKFEFTKKDGEAVVLDIMAKDGDDIEELATYINGQTDLFKASV 237
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
K+ + E S + +G V + V
Sbjct: 238 DQEGKLQIFVAEPNIEGNFNISGGLATELGLNGGPGVK----TTVQDIDITSVGGSQNAV 293
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID +K + +G+ +R+ + +++ VE R+ D D A E+T+L+
Sbjct: 294 GIIDAALKYVDSQRADLGAKQNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKS 353
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ L+ +SL +
Sbjct: 354 QILQQAGTSILAQAKQLPNSAISLLQ 379
>gi|260427861|ref|ZP_05781840.1| flagellin protein [Citreicella sp. SE45]
gi|260422353|gb|EEX15604.1| flagellin protein [Citreicella sp. SE45]
Length = 432
Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats.
Identities = 100/451 (22%), Positives = 167/451 (37%), Gaps = 19/451 (4%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN SA A L+ IN N+ VQ +S+G +V+ A DNAA W+IA+ M++D
Sbjct: 1 MSSILTNDSASIALMTLQSINSNIADVQSEISTGRKVAGADDNAAVWAIAKTMEADVLGY 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
VSD++ LG S + +A+ D+++ IK + D IQ+ I L+ Q+
Sbjct: 61 RKVSDSLALGGSTLSVARNAAETITDLLTEIKGHVVTAQGENVDRSKIQANIGALRDQIA 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + FNG N L+ + + + D + +
Sbjct: 121 AVVGAAQFNGMNLLQNTEATEGSG------------SEAVLGFLQRDASGVRGVDIAITK 168
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D + G + + ++ + + S
Sbjct: 169 RDLGQGAGAISASGGTYAAAVASATLNATQSGTLNASAVTVTAGMAFSLNIFGTDADDST 228
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ A ++ + + + + +
Sbjct: 229 FTQADLRFTTAASETRAEMTNAPIFYVARDGDTTSDVMTQLVRRFESYAAQNDIDESVLS 288
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ S+++ DT + +L++ +
Sbjct: 289 MTASGSSISISSGVTDGTDTIAVSLNTLTADAGN-------TVGGGLELLSGFDVTTTSG 341
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ +S I+ + AT AA GS +R+ Q F + DA+ G+G LVDAD+ S
Sbjct: 342 ASDALSQIEGLLTTATDAAAGFGSDQNRLETQTAFNGKLTDAMRAGIGTLVDADLEESSA 401
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQ QQQLA+QALSI N S +L LFR
Sbjct: 402 RLQALQVQQQLAIQALSIANGSPRALLGLFR 432
>gi|311695263|gb|ADP98136.1| protein containing flagellin N-terminal / flagellin C-terminal
[marine bacterium HP15]
Length = 608
Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats.
Identities = 49/370 (13%), Positives = 100/370 (27%), Gaps = 3/370 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++++A + L V +R+SSGLR++ A D+AA +I++ +S L+
Sbjct: 4 VINTNIASLNAQRNLNASQGQANVALERLSSGLRINSAKDDAAGLAISERFQSQIAGLNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M + + + I+ +D +++ E+ Q ++
Sbjct: 64 AQRNANDGISLAQTAEGAMDEITNNLQRIRELAVQSANATNSPSDRQALNQEVQQRIEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SFNG L + T + + + + + D
Sbjct: 124 NRIAAQTSFNGLKVLDGTFDTQTFQVGANTGETIAISGLDSRGSQIGSVLKETAGLSTDV 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G L+ + + + S T+
Sbjct: 184 IGPGEAATTDLNVSTLDFTTDLTITGTIGGEDVSIAAASYADADALATALQTEIQNGGGD 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ L TS S S + + T +
Sbjct: 244 LAEVTVTVDGNTLTITNPTSTDFPVTSFSISDASGVAGTTADNTGGGTNIAGAGGTDTID 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G + + + + + + +A
Sbjct: 304 VSGLDFTNGGTITFGGVDYPITAGSDFDDVAAELQAQLQANEDPDLTVANAGGTLTITNG 363
Query: 360 AMEEMVSFID 369
+D
Sbjct: 364 GAATPADDVD 373
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 33/315 (10%), Positives = 72/315 (22%)
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
G+ F + + + +
Sbjct: 294 AGAGGTDTIDVSGLDFTNGGTITFGGVDYPITAGSDFDDVAAELQAQLQANEDPDLTVAN 353
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ + A T A A
Sbjct: 354 AGGTLTITNGGAATPADDVDPGTISIEDGTGTPNNSIGGALTSIDGAEDLTLAQSFANGD 413
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
N +G + + + T + + ++ G
Sbjct: 414 TYNFEVDINGDVFTFEGMGSLSDIVSQINAQSTQTGIRANLNSDNDEIIFSSQFGEAFDI 473
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
D + + + + T + + + + ID I
Sbjct: 474 TIDADIDGDGIFGGVDDYNQAVNATIADDTYAVTGVDISSRDGADLAMISIDYAIDTING 533
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
++G++ +R + + + R+ DAD A+ES L+ Q QQ + L+
Sbjct: 534 YRAELGAVQNRFESTIANLATTSENLSASNSRIRDADFAAESAELARTQVLQQAGLSVLA 593
Query: 438 IVNNSTARILSLFRG 452
N ++L L +G
Sbjct: 594 QANARPQQVLQLLQG 608
>gi|229528806|ref|ZP_04418196.1| flagellin protein FlaC [Vibrio cholerae 12129(1)]
gi|229332580|gb|EEN98066.1| flagellin protein FlaC [Vibrio cholerae 12129(1)]
gi|327484709|gb|AEA79116.1| Flagellin protein FlaC [Vibrio cholerae LMA3894-4]
Length = 379
Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 81/230 (35%), Gaps = 4/230 (1%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
MT ++ TN SAM+A + L L +R+SSG R++ A D+AA I+ + + +
Sbjct: 1 MTINVNTNVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRG 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQ 116
L G S A+ M+++ ++ +++ ++ +++ E LQ
Sbjct: 61 LDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQ 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+L IA +SF G L G ++ I S + I
Sbjct: 121 DELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFIAEQ 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ G + K + + + ++ T
Sbjct: 181 PKTKEWGVPPTARDLKFEFTKKDGEAVVLDIMAKDGDDIEELATYINGQT 230
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 53/386 (13%), Positives = 106/386 (27%), Gaps = 10/386 (2%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++KA ++T ++ + + + +
Sbjct: 4 NVNTNVSAM-TAQRYLTKATGELNTSMERL-----SSGNRINSAKDDAAGLQISNRLTAQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + + + + +
Sbjct: 58 SRGLDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESV 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ S +AS I + + ++A + I
Sbjct: 118 ALQDELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFI 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A P +K A + DI AT N T +
Sbjct: 178 AEQPKTKEWGVPPTARDLKFEFTKKDGEAVVLDIMAKDGDDIEELATYINGQTDLFKASV 237
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
K+ + E S + +G V + V
Sbjct: 238 DQEGKLQIFVAEPNIEGNFNISGGLATELGLNGGPGVR----TTVQDIDITSVGGSQNAV 293
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID +K + +G+ +R+ + +++ VE R+ D D A E+T+L+
Sbjct: 294 GIIDAALKYVDSQRADLGAKQNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKS 353
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ L+ +SL +
Sbjct: 354 QILQQAGTSILAQAKQLPNSAISLLQ 379
>gi|73666213|gb|AAZ79783.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Thompson]
Length = 427
Score = 141 bits (353), Expect = 3e-31, Method: Composition-based stats.
Identities = 51/426 (11%), Positives = 112/426 (26%), Gaps = 43/426 (10%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
I Q +D + + ++ + + +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKAYDVQATVENSVKLDTSALTADAIKGGVTGATT 180
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
++ D + + + + + + I + ++ +S +
Sbjct: 181 AGALKDGKVYSNGTDYYVEVSFADATDSGKMVSLKLTLIQXYWSGYGSCSSSKYCSSKPA 240
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
G + D A + + + D
Sbjct: 241 GVSEVTEVQGLNTPSSAVQDQLTAAGVSAADAAKSEVVKMSYTDKNGKTIDGGFGVKVGD 300
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAY------------------------------- 355
K D S+ T
Sbjct: 301 DIYAATKNKDGSISINATEYTDKDGNTKTALNQLGGVDGKTEVVTIDGKTYNASKAAGHD 360
Query: 356 ---------NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
E + ID + A +G++ +R + + + +
Sbjct: 361 FKAQPELAEAAATTTENPLQKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSSA 420
Query: 407 VGRLVD 412
R+ D
Sbjct: 421 RSRIED 426
>gi|84624096|ref|YP_451468.1| flagellin [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|84368036|dbj|BAE69194.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 399
Score = 141 bits (353), Expect = 3e-31, Method: Composition-based stats.
Identities = 69/452 (15%), Positives = 137/452 (30%), Gaps = 59/452 (13%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + +L + ++SSG R++ A +AA +IA+ + L
Sbjct: 4 VINTNVMSLNAQRNLNTNSSSLALSIQQLSSGKRITSFAVDAAGGAIAERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S A+ M + + + I+ TD +++ SE+ QL S++
Sbjct: 64 ASRNANDGISLSQTAEGAMQEIGNNLQRIRELSVQSANATNSSTDREALNSEVKQLTSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A +SFNG L + +
Sbjct: 124 DRVANQTSFNGTKLLDGSFSGALFQVGA-------------------------------- 151
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ ++ ++ + +V A + + + K A+ +
Sbjct: 152 ---DAGQTIGINSIADANIDTLGRANFAAAVSAAGVSGTATASGSVSGISLSFKDASGSA 208
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + K A+ G+ I ++ +
Sbjct: 209 KSITIADVKVGAGDTAADVNKKVASAINDKLDQTGMYASIKSDGSVQIESLKAGQDFTSL 268
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G +++ VG S + S + L I A T + +
Sbjct: 269 SAGTSSAAGITVGAGITTASAASGSTASTLGSLDISTFSGAQQALEIVDKALTTVNSSRA 328
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
M + + + I +A + + + SRI D A +
Sbjct: 329 DMGAVQNRFTSTIANLSATSENLSASRSRIADT---------------------DYAKST 367
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ L+ + +LSL +
Sbjct: 368 AELTRTQILQQAGTAMLAQAKSVPQNVLSLLQ 399
>gi|291280394|ref|YP_003497229.1| flagellin domain protein [Deferribacter desulfuricans SSM1]
gi|290755096|dbj|BAI81473.1| flagellin domain protein [Deferribacter desulfuricans SSM1]
Length = 798
Score = 141 bits (353), Expect = 3e-31, Method: Composition-based stats.
Identities = 47/337 (13%), Positives = 107/337 (31%), Gaps = 3/337 (0%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I N ++++ + L L +R+SSGLR++ AAD+A+ +I++ ++ L
Sbjct: 3 LTIYQNIMSLNSQRHLGGTQSALSKSLERLSSGLRINHAADDASGLAISEKLRGQITGLK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G S + A+ + + ++ ++ D +Q EI QL+++
Sbjct: 63 RAVMNAQDGISMLQTAEGALEEVSSMLQRMRELAVQASNGTYTTNDRVELQKEIEQLKAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ I+ + FN + L D + ++ + + ++ + +
Sbjct: 123 IDRISTATEFNTKKLLNGDGTALWSASDNKISAIIRGNVQEGNYKIKMESLSVGQNQVFQ 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ +++I V S I ATT+ +
Sbjct: 183 TDIMTVSEAENGVTITHNPSTSNGVEEIKDLVSSNSDNIYRVTVDGATTASDGYYKVSTY 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ A +T + T ++D +T +
Sbjct: 243 DGGDNTFDSTVDGDVIGSALNSTNGTYYIEVIFNNDFDGTTYDSTSNDGDANRSTLGNAY 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
+ ++ T + G DT + L
Sbjct: 303 INIYNSDGTAFQTGIIANIEDTTTGDGGGNVILNMSN 339
Score = 120 bits (299), Expect = 6e-25, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 36/103 (34%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
+ + + + ID + IG+ +R+ + + + + + R
Sbjct: 696 VDKIWVVSQELAKRAIPDIDNALSQVVTIRATIGAQINRLEHTVNNLNVAHENMTASESR 755
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ D D+A E + Q Q + L+ N L L +G
Sbjct: 756 IRDLDVAEEMATFTRYQILSQSGIAMLAQANQIPQMALQLLQG 798
>gi|260574411|ref|ZP_05842415.1| flagellin domain protein [Rhodobacter sp. SW2]
gi|259023307|gb|EEW26599.1| flagellin domain protein [Rhodobacter sp. SW2]
Length = 400
Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats.
Identities = 98/451 (21%), Positives = 171/451 (37%), Gaps = 51/451 (11%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN SAM A Q ++ IN N+ Q +S+G V+ A DNAA W+I+++M+SD
Sbjct: 1 MSSILTNTSAMVALQTMKGINANMNKTQAEISTGKSVASAKDNAAVWAISKVMESDVQGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+SD++ LGSS V +A+ D+++ IK KI A E D I +++ L Q+
Sbjct: 61 KGISDSLALGSSTVAVARKASETVTDLLTQIKGKIVAAQEANVDRGKIDADVKALTKQIE 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + FNG N + + + G+ + N V + S
Sbjct: 121 SVVGAAQFNGLNLVNGSKSTVDILASLDRSGAGVTASNITVTAQNLSTNAGAALTNGTLS 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + E + + + + + ++
Sbjct: 181 AASVVTGTDVTLDGFTFQETGGALASNDPLAVPTDLTALLAGDSISLKIGSVEGKYVVQQ 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ I + + + + S + + + +DI
Sbjct: 241 GDNADSLISGLKNSLSQNGLSDTDFTLSITGAGELTVANNTNVAADI------------- 287
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ A ++ + +
Sbjct: 288 --------------------------------------SVAASRGTGALAGLNSIDVQTN 309
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ I+ +K A AA GS+ RI +Q F+ + D+++ G+G +VDA+M S
Sbjct: 310 AAGALTAIEDMVKGAIDAASSFGSVQKRIEIQSSFVSELSDSLKAGIGSMVDANMEETSA 369
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQ QQQL +QALSI N +L+LF+
Sbjct: 370 RLQALQVQQQLGIQALSIANQQPQSLLALFK 400
>gi|73666231|gb|AAZ79792.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Bredeney]
Length = 432
Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats.
Identities = 62/431 (14%), Positives = 119/431 (27%), Gaps = 48/431 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKV----------------------------------QITTIDYYLDP 172
I + +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKKYDVKSEAVKSGGGATLNTTGLNDAALKTGVGG 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
T + DG + D + I+VE D + + TT+
Sbjct: 181 ATNGTAAIKDGKVFFDATDNKYFIEVEGLTAGDATKNGVYEVSVADDGPVTMPTTTKVTG 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT 292
+ A + ++ + + +Y I
Sbjct: 241 GMPATATAVTETQPKPVALSTAVKDQLTDSGISAADAAKGQLVTMSYTDKNGKTIDGGFG 300
Query: 293 TKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANT 352
K N + NT Y D T + L + T +A+
Sbjct: 301 VKVGANIYAATKNKDGSFSINTTEYTDKGGNTKTALNQLGGADGKTEVVSIDGKTYNASK 360
Query: 353 D-----------AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
A E ++ ID + A +G++ +R + + +
Sbjct: 361 AAGHNFKAQPELAEAAATTTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVN 420
Query: 402 AVEKGVGRLVD 412
+ R+ D
Sbjct: 421 NLSSARSRIED 431
>gi|330445357|ref|ZP_08309009.1| flagellin [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328489548|dbj|GAA03506.1| flagellin [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 513
Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats.
Identities = 71/509 (13%), Positives = 135/509 (26%), Gaps = 61/509 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I TN +AM+A + L + ++ ++SSGLR++ A D+AA I+ + + L+
Sbjct: 4 TINTNVTAMTAQRNLNSASSSVADSMQKLSSGLRINSAKDDAAGLQISNRLTNQTNGLNV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M ++ +M ++ D +++Q E+ QLQS++
Sbjct: 64 AMRNANDGVSMAQTAEGAMQESTTIMERMRELALQSANGSNSDKDREAMQKEMGQLQSEM 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G++ L G+ + I + + Y + + D
Sbjct: 124 NRIADTTSFGGQSLLDGSFGTKSFQIGANSNETQELGLMDVSSHALGREYKNLDAGPSDV 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G G I E Q + + ++ A + + A
Sbjct: 184 EVLGGTSTGDGSFALNINGEAQNIAITKDMKAEDLQNKINNIDGVSDVKVAEIASKEAVA 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + GS ++ A I + + +
Sbjct: 244 SEGAVSGLNIAGDGEVTFKIDNSDAADGSDEKTITLVAADIADKTALEAKLNGAGLTNVT 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + D+ S + T
Sbjct: 304 LVANDDGKGFSIERADGKDVAIKHIKDAGTGSAGANISVNGAAASAVGTSEATATATGSE 363
Query: 360 AMEEMVS------FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
A +DT + + KI + + + A
Sbjct: 364 AEAGGFKLDFSGMKLDTSVSTVSYGTTKIDGTADAADMTIGSDTTTESVASLDLSTAEGA 423
Query: 414 -------DMASE-------------------STRL------------------------- 422
D A E + L
Sbjct: 424 QNAIDVLDAAMEQVDEKRAEIGAFQNRMNHTMSNLANINENVNASNSRIKDVDFASETIN 483
Query: 423 -SALQTQQQLAVQALSIVNNSTARILSLF 450
+ Q QQ L+ LSL
Sbjct: 484 MTKGQILQQAGTSILAQAKQIPQAALSLL 512
>gi|262404532|ref|ZP_06081087.1| flagellin protein FlaC [Vibrio sp. RC586]
gi|262349564|gb|EEY98702.1| flagellin protein FlaC [Vibrio sp. RC586]
Length = 379
Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 82/230 (35%), Gaps = 4/230 (1%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
MT ++ TN SAM+A + L L +R+SSG R++ A D+AA I+ + + +
Sbjct: 1 MTINVNTNVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRG 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQ 116
L G S A+ M+++ ++ +++ ++ +++ E LQ
Sbjct: 61 LDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQ 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+L IA +SF G L G ++ I S + I +
Sbjct: 121 DELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFVSEQ 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ G + K + + + ++ T
Sbjct: 181 AKTKEWGVPPTARDLKFEFTKKDGEAVVLDIMAKDGDDIEELATYINGQT 230
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 49/386 (12%), Positives = 105/386 (27%), Gaps = 10/386 (2%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++KA ++T ++ + + + +
Sbjct: 4 NVNTNVSAM-TAQRYLTKATGELNTSMERL-----SSGNRINSAKDDAAGLQISNRLTAQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + + + + +
Sbjct: 58 SRGLDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESV 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ S +AS I + + ++A + +
Sbjct: 118 ALQDELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFV 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
+ +K A + DI AT N T +
Sbjct: 178 SEQAKTKEWGVPPTARDLKFEFTKKDGEAVVLDIMAKDGDDIEELATYINGQTDLFKASV 237
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
K+ + + S + +G V + V
Sbjct: 238 DQDGKLQIFVSEPNVQGDFNISGGLATELGLNGGPGVK----TTVQDIDITSVGGSQNAV 293
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID +K + +G+ +R+ + +++ VE R+ D D A E+T+L+
Sbjct: 294 GIIDAALKYVDSQRADLGAKQNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKS 353
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ L+ +SL +
Sbjct: 354 QILQQAGTSILAQAKQLPNSAISLLQ 379
>gi|56421677|ref|YP_148995.1| flagellar protein [Geobacillus kaustophilus HTA426]
gi|56381519|dbj|BAD77427.1| flagellar protein [Geobacillus kaustophilus HTA426]
Length = 604
Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats.
Identities = 44/289 (15%), Positives = 101/289 (34%), Gaps = 3/289 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++A + L ++ +R+SSGLR++ AAD+AA +I++ M+S L
Sbjct: 3 INHNIQALNAYRNLAANQSSISKNLERLSSGLRINRAADDAAGLAISEKMRSQIRGLQMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ +D +IQ+E+ QL ++
Sbjct: 63 ERNALDAISLIQTAEGALNEVHSILQRMRELAVQAANDTLEPSDRAAIQAEVDQLTKEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + + A S + + + +T + +
Sbjct: 123 RIADTTQFNQKILFSGSPEGRAFAQANSPAIRYAGNGTWQGVVTATPTDPAKVVLDFSKN 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
R + + I + + + + + + + +
Sbjct: 183 LGMLTRDQIDGQTLTINGKTYQIDTKNDGLTNTGHIAVNVSWIATPANDSDAVTNINNLL 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
A A + + + T + SG+ S V + +++
Sbjct: 243 NALKNAIVANDSTFSSTSLITNASDSGTNSDGVIVNGRLTLTTANNMAP 291
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 35/265 (13%), Positives = 76/265 (28%)
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+ + +N + + S + SG + Q G A
Sbjct: 339 FEDVPKNGDVLKIDNLTITFSDSTASGYTWSGGQGTATINVSGKTVFDVLDDIKQVLGDA 398
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
A + S + + + V+ + +
Sbjct: 399 KADGINQPVRALTAFSVVGSSLVLSTDRTDDGKPFGSANGLEVQIIDNDFEANKGKTLKL 458
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ N + + +D+ + +++ + A D + A ++
Sbjct: 459 DMQIGANESETLSLDVGVMDAASLGLARMADHTTILNTGVNAEAGIDVSSSAQAAHAAIT 518
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
ID I + GK+G++ +R+ + + + + R+ D DMA E +
Sbjct: 519 IIDQAINKVSEERGKLGAVQNRLEHTINNLTTANENLTAAESRIRDTDMAMEMAEFTKNN 578
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
Q A L+ N IL L +
Sbjct: 579 ILTQAAQAMLAQSNQLPQGILQLLK 603
>gi|73666257|gb|AAZ79805.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Oranienburg]
gi|73666263|gb|AAZ79808.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Oranienburg]
Length = 440
Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats.
Identities = 63/440 (14%), Positives = 119/440 (27%), Gaps = 56/440 (12%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTD--------- 137
++ SIQ EI Q ++ ++ + FNG L D
Sbjct: 61 RVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGA 120
Query: 138 -------------------------LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
G A++ + Y +D
Sbjct: 121 NDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDTYAVGANKYRVDV 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + + T + N + +V T S A +
Sbjct: 181 NSGAVVTDTTAPTVPDKVYVNAANGQLTTADAQNNTAVDLFKSTKSAAGTDDAKAIATSI 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT 292
K + + A T S T + ++ S + + +
Sbjct: 241 KGGKVGDTFDYKGVSFTIDTKAGDDGNGTVSTTINGEKVTLTISDIGASATDVNSAKIQS 300
Query: 293 TKNSITSDPGYTNSTVAKVGN-------------------THYYVDTESTTLDSRKDLPK 333
+K+ TS + K N + K
Sbjct: 301 SKDVYTSVVSGQFTFADKTKNESAKLSDLEANNAVKGESKITVNGAEYTANAAGDKVTLA 360
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
++ N DA K + ++ ID+ + A +G+I +R
Sbjct: 361 GKTMFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGAIQNRFDSAI 420
Query: 394 DFIKLMRDAVEKGVGRLVDA 413
+ + R+ DA
Sbjct: 421 TNLGNTVTNLNSARSRIEDA 440
>gi|95929888|ref|ZP_01312629.1| flagellin-like [Desulfuromonas acetoxidans DSM 684]
gi|95134184|gb|EAT15842.1| flagellin-like [Desulfuromonas acetoxidans DSM 684]
Length = 932
Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats.
Identities = 54/298 (18%), Positives = 105/298 (35%), Gaps = 4/298 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I TN ++++A + L +L R+SSGLR++ A D+AA +I+ M + L+
Sbjct: 3 LTINTNVASLNAQRNLGRSQTDLNQSMQRLSSGLRINSAKDDAAGLAISDRMTAQITGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
+ G S A+ + ++ +++ I+ +D +S+Q+E+ QL +
Sbjct: 63 QATRNANDGISLSQTAEGALQESTNILQRIRELGVQSANDTNSASDRESLQAEVDQLIEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA + FNG+N L + +T + + S + T+ Y+ +
Sbjct: 123 LDRIADTTQFNGKNLLDGTMNDATFQVGANAGVSQTISFSIASAETSQLSYVGATIEAPN 182
Query: 179 SSTDGTE-RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
G + V + D + + I+T + +
Sbjct: 183 GDAVVGGEMDGSALAAGDLVVNGTDVGATDGTNTSLAAAINTAAGVDIAEAVNVQSFDFS 242
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
A + AA S + + A M + T N
Sbjct: 243 AVSLANSTTNVTATEATPGAAAIPAQAESQTIDLTATTLADGDTMTFTVDGSDFTFTN 300
Score = 116 bits (289), Expect = 9e-24, Method: Composition-based stats.
Identities = 47/406 (11%), Positives = 108/406 (26%), Gaps = 23/406 (5%)
Query: 46 YWSIAQ-IMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD 104
SIA + + A+ + G S +D + +A T +
Sbjct: 548 VLSIANYTLTDEGSAVLQFAQNSGTA-SNIDPIDTALDEAASAGPTGSETVAGIAAAPAQ 606
Query: 105 SKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQIT 164
++ ++ + + TD + +S S + + +
Sbjct: 607 AEIQNLNLSAV------TVYAGQDMTFSVDGTDYTFTNSSGGDLTAASLVDEIVNGTSGS 660
Query: 165 TIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
T + T + + N D G +
Sbjct: 661 TALSVTNYTLSDAGGGTLTFTQDAGNESNIGAISATTQGAVSGTYTLDFDGGTVLDVAAV 720
Query: 225 ATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGN 284
++ +A D A+ L + T + + + +
Sbjct: 721 SSNDITAQDVVDAINDDVAVGASYSAALTDSGQVEITKTDGTAFTLAETIDTDGSTPLAT 780
Query: 285 SDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTL 344
S T +T + + + +
Sbjct: 781 SAGLAEVGTTA---------------SEYNGQISLDSTTDISIEEGTTGALAAAGLDSAG 825
Query: 345 NITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVE 404
N T + + + +S +D + G +G++ +R ++ + + +
Sbjct: 826 NATTTIDQVDVSTREGATTAISSVDAALAQIDTIRGDLGAVQNRFESTIANLQNVAENLS 885
Query: 405 KGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R++DAD+A E++ ++ QQ V L+ N + LSL
Sbjct: 886 AARSRILDADVAEETSNMTKQNILQQAGVSILAQANQAPQLALSLL 931
>gi|73666259|gb|AAZ79806.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Oranienburg]
Length = 440
Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats.
Identities = 62/440 (14%), Positives = 118/440 (26%), Gaps = 56/440 (12%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTD--------- 137
++ SIQ EI Q ++ ++ + FNG L D
Sbjct: 61 RVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGA 120
Query: 138 -------------------------LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
G A++ + Y +D
Sbjct: 121 NDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDTYAVGANKYRVDV 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + + T + N + + T S A +
Sbjct: 181 NSGAVVTDTTAPTVPDKVYVNAANGQLTTADAQNNTAGDLFKSTKSAAGTDDAKAIATSI 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT 292
K + + A T S T + ++ S + + +
Sbjct: 241 KGGKVGDTFDYKGVSFTIDTKAGDDGNGTVSTTINGEKVTLTISDIGASATDVNSAKIQS 300
Query: 293 TKNSITSDPGYTNSTVAKVGN-------------------THYYVDTESTTLDSRKDLPK 333
+K+ TS + K N + K
Sbjct: 301 SKDVYTSVVSGQFTFADKTKNESAKLSDLEANNAVKGESKITVNGAEYTANAAGDKVTLA 360
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
++ N DA K + ++ ID+ + A +G+I +R
Sbjct: 361 GKTMFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGAIQNRFDSAI 420
Query: 394 DFIKLMRDAVEKGVGRLVDA 413
+ + R+ DA
Sbjct: 421 TNLGNTVTNLNSARSRIEDA 440
>gi|73666253|gb|AAZ79803.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Livingstone]
Length = 438
Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats.
Identities = 57/437 (13%), Positives = 109/437 (24%), Gaps = 54/437 (12%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANGTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIR--------------DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
I + +D T + T + +
Sbjct: 121 NDGETIDIDLKEISSKTLGLDKLNVQDAYTPKETAVIVDRTTYKDGTDTISAQSNADIQT 180
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
DI + + + D
Sbjct: 181 AIGGGATGVTGADIKFKDGQYYLDVKGGAAAGIYKATYDETYQKVSIDSTDKTPLTGTAA 240
Query: 253 PAAPAAPNTTSGT-------------------------------------SGSKSPSVAA 275
A T K+ V
Sbjct: 241 ADIQATTAITKNQVAEVTKGNADTTTVAAQLAAAGVTGADKDNTSLVKLSFEDKNGKVID 300
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
++MG+ K + T + A V T +
Sbjct: 301 GGYAVKMGDDFYAATYDEKTGTITAKTTTYTDGAGVAQTGAVKFGGANGKSEVVTATDGK 360
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
S + + R E + ID + A +G++ +R +
Sbjct: 361 TYLASDLDKHNFRTGGELKEVNTDKTENPLQKIDAALAQVDALRSDLGAVQNRFNSAITN 420
Query: 396 IKLMRDAVEKGVGRLVD 412
+ + + R+ D
Sbjct: 421 LGNTVNNLSSARSRIED 437
>gi|73666261|gb|AAZ79807.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Oranienburg]
Length = 440
Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats.
Identities = 63/440 (14%), Positives = 118/440 (26%), Gaps = 56/440 (12%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTD--------- 137
++ SIQ EI Q ++ ++ + FNG L D
Sbjct: 61 RVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGA 120
Query: 138 -------------------------LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
G A++ + Y +D
Sbjct: 121 NDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDTYAVGANKYRVDV 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + + T + N +V T S A +
Sbjct: 181 NSGAVVTDTTAPTVPDKVYVNAANGQLTTADAQNTTAVDLFKSTKSAAGTDDAKAIATSI 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT 292
K + + A T S T + ++ S + + +
Sbjct: 241 KGGKVGDTFDYKGVSFTIDTKAGDDGNGTVSTTINGEKVTLTISDIGASATDVNSAKIQS 300
Query: 293 TKNSITSDPGYTNSTVAKVGN-------------------THYYVDTESTTLDSRKDLPK 333
+K+ TS + K N + K
Sbjct: 301 SKDVYTSVVSGQFTFADKTKNESAKLSDLEANNAVKGESKITVNGAEYTANAAGDKVTLA 360
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
++ N DA K + ++ ID+ + A +G+I +R
Sbjct: 361 GKTMFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGAIQNRFDSAI 420
Query: 394 DFIKLMRDAVEKGVGRLVDA 413
+ + R+ DA
Sbjct: 421 TNLGNTVTNLNSARSRIEDA 440
>gi|73666251|gb|AAZ79802.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Livingstone]
Length = 438
Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats.
Identities = 57/437 (13%), Positives = 109/437 (24%), Gaps = 54/437 (12%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANGTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIR--------------DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
I + +D T + T + +
Sbjct: 121 NDGETIDIDLKEISSKTLGLDKLNVQDAYTPKETAVIVDRTTYKDGTDTISAQSNADIQT 180
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
DI + + + D
Sbjct: 181 AIGGGATGVTGADIKFKDGQYYLDVKGGAAAGIYKATYDETYQKVSIDTTDKTPLTGTAA 240
Query: 253 PAAPAAPNTTSGT-------------------------------------SGSKSPSVAA 275
A T K+ V
Sbjct: 241 ADIQATTAITKNQVAEVTKGNADTTTVAAQLAAAGVTGADKDNTSLVKLSFEDKNGKVID 300
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
++MG+ K + T + A V T +
Sbjct: 301 GGYAVKMGDDFYAATYDEKTGTITAKTTTYTDGAGVAQTGAVKFGGANGKSEVVTATDGK 360
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
S + + R E + ID + A +G++ +R +
Sbjct: 361 TYLASDLDKHNFRTGGELKEVNTDKTENPLQKIDAALAQVDALRSDLGAVQNRFNSAITN 420
Query: 396 IKLMRDAVEKGVGRLVD 412
+ + + R+ D
Sbjct: 421 LGNTVNNLSSARSRIED 437
>gi|73666209|gb|AAZ79781.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Thompson]
gi|73666211|gb|AAZ79782.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Thompson]
gi|73666215|gb|AAZ79784.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Thompson]
Length = 427
Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats.
Identities = 51/426 (11%), Positives = 112/426 (26%), Gaps = 43/426 (10%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
I Q +D + + ++ + + +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKAYDVQATVENSVKLDTSALTADAIKGGVTGATT 180
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
++ D + + + + + + I + ++ +S +
Sbjct: 181 AGALKDGKVYSNGTDYYVEVSFADATDSGKMVSLKLTLIQXYWSGYSSCSSSKYCSSKPA 240
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
G + D A + + + D
Sbjct: 241 GVSEVTEVQGLNTPSSAVQDQLTAAGVSAADAAKSEVVKMSYTDKNGKTIDGGFGVKVGD 300
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAY------------------------------- 355
K D S+ T
Sbjct: 301 DIYAATKNKDGSISINATEYTDKDGNTKTALNQLGGVDGKTEVVTIDGKTYNASKAAGHD 360
Query: 356 ---------NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
E + ID + A +G++ +R + + + +
Sbjct: 361 FKAQPELAEAAATTTENPLQKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSSA 420
Query: 407 VGRLVD 412
R+ D
Sbjct: 421 RSRIED 426
>gi|315452810|ref|YP_004073080.1| putative flagellin, FlaA [Helicobacter felis ATCC 49179]
gi|7387670|sp|Q9XB38|FLAA_HELFC RecName: Full=Flagellin A
gi|5441619|emb|CAB46858.1| flagellin A [Helicobacter felis]
gi|315131862|emb|CBY82490.1| putative flagellin, FlaA [Helicobacter felis ATCC 49179]
Length = 513
Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats.
Identities = 68/508 (13%), Positives = 139/508 (27%), Gaps = 61/508 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +A++A L+ +R+SSGLR++ AAD+A+ +IA ++S +L
Sbjct: 5 VNTNINALNAHAMGLVTQRELKESLERLSSGLRINKAADDASGMTIADSLRSQAKSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQSQLR 120
G + IA M + I ++ TIK K T + K++Q++I +L L
Sbjct: 65 IANTNDGMGIIQIADKAMDEQIKILDTIKVKATQAAQDGQNTQSRKALQADIVRLIQSLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +S+NG+ L + + + + + S
Sbjct: 125 NIGNTTSYNGQTLLSGAFSNKEFQVGAYSNETIKASIGSATSDKIGQVKITTGKNITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + ++ + + I+ + A + + +
Sbjct: 185 EVALTFKQVDGVHDVSLESVKISTSAGTGLGVLAEVINKNSNATGVRATANVITTSDSAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
++ ++++ V S + + + T +
Sbjct: 245 KSGSLSSLTVNGIEIGNILGIKKNDSDGRLVAALNAVTAQTGVEAYTDSVGRLNLRSIDG 304
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G + + T + + A A
Sbjct: 305 RGINIKANSTNVDGQASALTTLNGGQDITRGSTNFGRLSLVRQDARDILVVSGANVSASA 364
Query: 361 MEEMVSFI--DTQIKCAT----------AAAGKIGSISS--------------------- 387
+ F T A G+ +
Sbjct: 365 GYAAIGFAKGTTANTTVNLRDVLGEFNQAVRSASGANYNKTLASENLTLGSGVTTLRGAM 424
Query: 388 -------------------------RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
++ + I + + V+ ++ D D A ES
Sbjct: 425 VVMDIAESAQKMLDKVRSDLGSVQNQMVSTVNNITITQVNVKAAESQIRDVDFAQESANF 484
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLF 450
S Q A+S N IL L
Sbjct: 485 SKNNILAQSGSYAMSQANTVQQNILRLL 512
>gi|261211314|ref|ZP_05925602.1| flagellin protein FlaC [Vibrio sp. RC341]
gi|260839269|gb|EEX65895.1| flagellin protein FlaC [Vibrio sp. RC341]
Length = 379
Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 82/230 (35%), Gaps = 4/230 (1%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
MT ++ TN SAM+A + L +L +R+SSG R++ A D+AA I+ + + +
Sbjct: 1 MTINVNTNVSAMTAQRYLTKATGDLNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRG 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQ 116
L G S A+ M+++ ++ +++ ++ +++ E LQ
Sbjct: 61 LDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSDSERQALDEESKALQ 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+L IA +SF G L G ++ I S + I +
Sbjct: 121 DELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFVSEQ 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ G + K + + + + T
Sbjct: 181 AKTKEWGVPPTARDLKFEFTKKDGEAVVLDISAKSGDDIEELATYINGQT 230
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 34/365 (9%), Positives = 85/365 (23%), Gaps = 2/365 (0%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQL--RDIARGSSFNGENWLRTDLGSSTASIA 146
K T + + S + I + I+ + ++
Sbjct: 15 QRYLTKATGDLNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISI 74
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + +Q DS + ++ ++
Sbjct: 75 AQTAEGAMNESTSILQRMRDLALQSANGTNSDSERQALDEESKALQDELNRIAETTSFGG 134
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ + G S + + + + D G + +
Sbjct: 135 RKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFVSEQAKTKEWGVPPTARD 194
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + ++ + + +E
Sbjct: 195 LKFEFTKKDGEAVVLDISAKSGDDIEELATYINGQTDLFKASVDQDGKLQIFVSEPNVQG 254
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + + V ID +K + +G+
Sbjct: 255 NFNISGGLATELGLNGGPGVKTTVQDIDITSVGGSQNAVGIIDAALKYVDSQRADLGAKQ 314
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R+ + +++ VE R+ D D A E+T+L+ Q QQ L+
Sbjct: 315 NRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKSQILQQAGTSILAQAKQLPNSA 374
Query: 447 LSLFR 451
+SL +
Sbjct: 375 ISLLQ 379
>gi|192362369|ref|YP_001982389.1| flagellin [Cellvibrio japonicus Ueda107]
gi|190688534|gb|ACE86212.1| flagellin [Cellvibrio japonicus Ueda107]
Length = 675
Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 3/165 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN +++++ ++L + L+ +R+SSG R++ A D+AA +I+ M S L
Sbjct: 3 LVINTNVASLNSQRQLMNSGSALDRASERLSSGQRINSAKDDAAGLAISNRMTSQIRGLD 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G S + A+ + + +++ ++ D ++ +E+ QL +
Sbjct: 63 QAIRNANDGVSLIQTAEGALQETTNILQRMRELSIQSSNGIYSNADRATLNAEVKQLIEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
L IA +SFNG+ L LG +
Sbjct: 123 LDRIATSTSFNGQKLLDGSLGKVNLQVGADAGQIITMKIPAMDAK 167
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 48/122 (39%)
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRI 389
+ + + + ++ + ID + A ++G+I++R+
Sbjct: 554 PATIGLLESNVTAEGAFGTAIASISIDTVAGAQKAIGVIDKALATINDARSQLGAINNRL 613
Query: 390 HLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
+ + + R+VDAD A+E+ LS Q QQ A L+ N ++LSL
Sbjct: 614 DFTMSNLANISEKTSASRSRIVDADFAAETAALSRAQVLQQAATAMLAQANARPEQVLSL 673
Query: 450 FR 451
R
Sbjct: 674 LR 675
>gi|73666299|gb|AAZ79826.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Mbandaka]
gi|73666301|gb|AAZ79827.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Mbandaka]
gi|73666303|gb|AAZ79828.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Mbandaka]
Length = 431
Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats.
Identities = 65/430 (15%), Positives = 113/430 (26%), Gaps = 47/430 (10%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQ---------ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
I Q D T LD T G L
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKKYDVDSTGVTQSLDLKTAGITGATLKAGITGTT 180
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
E +KD V S + TT A A G ++
Sbjct: 181 TETGSVKDGKVYYDADSKNYYVEVDFTDTTDKAAHAGFYKADVDADGNVSLATGATKEAK 240
Query: 258 APN-----------------------------------TTSGTSGSKSPSVAASATYIRM 282
N T + +
Sbjct: 241 PTNAVEVEKTIDEKPLKASSSVQDALKASGIADAVAEAATVVKMSYTDKNGKTIDGGYGI 300
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
D + AT + + T+ T + S
Sbjct: 301 KVGDDYYAATKEKDGSYSINSTSYTDKDGNTKTALNQLGGADGKTEVVSIDGKTYNASKA 360
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + A E + ID + A +G++ +R + + +
Sbjct: 361 AGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVNN 420
Query: 403 VEKGVGRLVD 412
+ R+ D
Sbjct: 421 LSSARSRIED 430
>gi|289523315|ref|ZP_06440169.1| flagellar protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503007|gb|EFD24171.1| flagellar protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 772
Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N A+ L N +L+ +++S+GLR++ AAD+AA +I++ M++ L
Sbjct: 3 VYHNIPALFTYNALNGTNESLQKSINKLSTGLRINTAADDAAGLAISEKMRAQVRGLDMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ D + IQ EI QL+ ++
Sbjct: 63 VRNAQDGISMIQTAEGALNETHSILQRMRELAVQAANDTLTANDRQVIQLEIDQLKEEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTAS 144
IA + FN + L ++
Sbjct: 123 RIASTTQFNKKKLLDGTASVLWSA 146
Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats.
Identities = 42/412 (10%), Positives = 114/412 (27%), Gaps = 3/412 (0%)
Query: 41 ADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI-TAGV 99
+D W+ + + + + ++ A + D+ + + A
Sbjct: 363 SDWPLGWAGTNKFEFAFNKAGVDNKTVHFRTFYLNTANGVTYE-GDISARFGDLTNIASG 421
Query: 100 ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
E T + + + Q+ + + F N T ++ +
Sbjct: 422 ETVTGASFTAAYVGQVAANDVMLRDLDRFWDPNGRFLLEDPQTITLIQGDGTKASVTLYA 481
Query: 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
I + L+ + + + V+ ++
Sbjct: 482 TDTIRNVQEKLNDAIRDQLGQGQYVSSNADKFVTYVSEDDEASNTPEAVAGTFVIRSVIA 541
Query: 220 KKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ +G + + + A A T ++ + ++ +
Sbjct: 542 GTNGEISFAGDEDVIKALSLSVIQESKENEFRVSAQDAHSGATVASNVKVTGNLLIGIVH 601
Query: 280 IRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGY 339
+ + + T+ + + + T ++ ST + +++
Sbjct: 602 PNVDVEFDAMADVAVSWSTNAKQFELANADETYETSLHLADNSTVFQIGANQGEDMGI-D 660
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
+ N ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 661 LGNMSVRSLGINRVLVTDRDSAARSITIIDGALDKVSNQRAKLGAYQNRLEHTINNLTTA 720
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ R+ D DMA E + LQ Q L+ N +L L R
Sbjct: 721 SQNLTAAESRIRDLDMAQEMMNFTKLQILMQAGNAMLAQANTLPQAVLQLLR 772
>gi|307700476|ref|ZP_07637514.1| flagellin protein [Mobiluncus mulieris FB024-16]
gi|307614345|gb|EFN93576.1| flagellin protein [Mobiluncus mulieris FB024-16]
Length = 532
Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats.
Identities = 55/482 (11%), Positives = 131/482 (27%), Gaps = 78/482 (16%)
Query: 24 LEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSK 83
L +++SSG R++ AAD+AA +I++ ++S G G S + A+ +++
Sbjct: 51 LAKSLEKLSSGFRINRAADDAAGLAISEGLRSQVGGNRQAVRNAQDGISVIQTAEGALNE 110
Query: 84 AIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGS 140
++ ++ +I++E+ QL+ +L I + ++FNG L D
Sbjct: 111 VHSILQRMRTLAVQGANDTNDTKSRSNIRAELVQLRDELNRIGKVTNFNGTKLLNGDASG 170
Query: 141 S---TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ + + + K T + + + + G I+
Sbjct: 171 AKALKFQVGANGTKDDRIVVDLKDADVTKISKFGGNMDVSNVKSATSAAIGKNKYVFDIE 230
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ V+ + + IS K +G A + + +
Sbjct: 231 GKQLVMDFANNAAAPTDKEISAALGKAIKDTGFDGYVGEAATNVSSEAVALVTATDDLKG 290
Query: 258 APNTTS----GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+ T + + ++ I+ D V +
Sbjct: 291 SVFTLQIGEKSVNWTADEGTGFKRVADQLQAQLTEKGLDKDYRISFDGQSNKFKVETLNE 350
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT--- 370
VD + + + + +++T + + + +D
Sbjct: 351 NSPQVDVKLSVNTDKIKVGTGTTGTNNLLTDKLGTPTGNGIHFSVKNKLITMERVDGKNI 410
Query: 371 ------QIKCATAAAG--------------------------------------KIGSIS 386
+ A A ++
Sbjct: 411 NIDLEHSLSEVAAGAAPKDVAWTVKKAAATLPDGSAAGDYIKKDLDLLSVEDHDSAQALI 470
Query: 387 SRIHLQEDFIKLMRDA---------------------VEKGVGRLVDADMASESTRLSAL 425
+ + + + + R + R+ D DMA E + +
Sbjct: 471 NLLDDKINSVSTARANLGAIQNRFEHTITNLNVAVENLAASESRIRDTDMAQEMMQFTRN 530
Query: 426 QT 427
Q
Sbjct: 531 QI 532
>gi|218710260|ref|YP_002417881.1| flagellin [Vibrio splendidus LGP32]
gi|218323279|emb|CAV19456.1| polar flagellin [Vibrio splendidus LGP32]
Length = 407
Score = 140 bits (351), Expect = 5e-31, Method: Composition-based stats.
Identities = 58/451 (12%), Positives = 123/451 (27%), Gaps = 70/451 (15%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 23 NVNTNVSAMTAQRYLNSANSAQQTSMERLSSGSKINSAKDDAAGLQISNRLNVQSRGLDV 82
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ D +IQ E+T L +L
Sbjct: 83 AVRNANDGISIAQTAEGAMNETSNILQRMRDLSLQSTNGSNTKSDRVAIQEEVTALNDEL 142
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + +
Sbjct: 143 NRIAETTSFGGNKLLNGTHGTKSFQIGADNGEAVMLQLKDMRSDNDQMGGS--------- 193
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
Y + A + + ++
Sbjct: 194 ------------------------------SYQFTEAKGKDWGVKAGANDLTMSLKDSFG 223
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
DQ + + A K+ I GN+ + +++
Sbjct: 224 DQREINISAKAGDDIEELATYINGQQDLVKASIDEEGKLQIFAGNNKVDGEIAFSGALSD 283
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ G + T T+D + L ++ +
Sbjct: 284 ELGMQAGAKPEDPKTLEGKQVTVDTIDVTSVGGAQESVAVIDAALKYVDSHRSELGAFQN 343
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D + A+ + ++ ++
Sbjct: 344 RFDHAINNLDNINENVNASKS-----------RIKDTDFAKETTNMTKSQI--------- 383
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLF 450
Q + L+ + LSL
Sbjct: 384 --------LSQASSSILAQAKQAPNSALSLL 406
>gi|241763661|ref|ZP_04761711.1| flagellin domain protein [Acidovorax delafieldii 2AN]
gi|241367136|gb|EER61502.1| flagellin domain protein [Acidovorax delafieldii 2AN]
Length = 521
Score = 140 bits (351), Expect = 6e-31, Method: Composition-based stats.
Identities = 67/519 (12%), Positives = 150/519 (28%), Gaps = 68/519 (13%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I TN ++++A + L +L R+SSGLR++ A D+AA +I++ + ++
Sbjct: 3 STINTNIASLTAQRNLGISQSSLNTSIQRLSSGLRINSAKDDAAGLAISERFTTQIRGMT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S +A+ + A +++ ++ +D +++ +E+ QL S+
Sbjct: 63 QAARNANDGISLAQVAEGALGGAGNILQRVRELAVQSANATNSASDRQALNAEVNQLTSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA+ + FNG L S+ + + + + +Y +
Sbjct: 123 LDRIAKTTEFNGRKLLDGSFTSAAFQVGANANQTITATSSNFSTNAYGNYRIGGTAATTT 182
Query: 179 SSTDGTERYGLLD-------------RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+ + V AS
Sbjct: 183 GGAGDLTLGSTPNAVVAQGKVGASGITGSTLTVNGAYGSVGIPYPAGASAKDMAALVNAQ 242
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
T +A + L A + + T S + + +
Sbjct: 243 TEKTGVSASARTEIGLSGLSPATSYTLKVASDNGSGQAVTVSFTVGSPLNNDSLGDAAKA 302
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
A T + T + + +S ++ + +
Sbjct: 303 FNDAAAKTGVVARVNDTGTGLVLTNAAGNDIKIVNDSVAANTINITDAAGGALVGGAGVG 362
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQ-----------------IKCATAAAGKIGSISS- 387
I A + + +D+ + A AA +I ++ +
Sbjct: 363 IAGQAGAGVFGTNDIVVTGQLTLDSSKSFSAVDGAGAAAGGGFLNVAAAAGSQIQTVQNM 422
Query: 388 -------------RIHLQEDFIKLMRDAVEKGVGR----LVDADMASESTRLSALQTQ-- 428
+ I R R + + +++SE+ + + Q
Sbjct: 423 DVSTVDGANRTLAIVDSAIAAISGQRANYGALQSRFETAIANLNVSSENMSAARSRIQDA 482
Query: 429 ---------------QQLAVQALSIVNNSTARILSLFRG 452
QQ ++ N +L+L +G
Sbjct: 483 DFAAETANLSRTQILQQAGTAMVAQANQIPQGVLALLKG 521
>gi|288572929|ref|ZP_06391286.1| flagellin domain protein [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288568670|gb|EFC90227.1| flagellin domain protein [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 1943
Score = 140 bits (351), Expect = 6e-31, Method: Composition-based stats.
Identities = 52/369 (14%), Positives = 114/369 (30%), Gaps = 4/369 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +N +++ + L +N LE R+S+GLR++ ++D+AA +I++ M++ L
Sbjct: 3 IYSNIASLISHNALSKVNGRLEKTTRRLSTGLRINSSSDDAAGLAISEKMRAQIKGLDRA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ G S + A+ G+++ ++ ++ D IQ EI QL Q+
Sbjct: 63 AMNSQDGISLLQTAEGGLNEIHSMIQRMRELSVQAANDVLTSGDRGHIQDEIEQLVQQVN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
DIA + FN + L + + ++ + + K + + + +
Sbjct: 123 DIANQTQFNRKKLLNGSMAALWSTSTSDISVVVSDNLLSKDVMNNVKSAAGNYKLTFSTV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
++G E + + + + G + + + +
Sbjct: 183 SNGMENIQKSNIMYLKHGTHEASVVNNAEGSGLVGMTALNMVEG-IWNLETREHPFGGIR 241
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
G A P + T + V S M + D + A +
Sbjct: 242 YYVGSANSDPPTVGGTLEVSPTPNIVSPGTYDVRLSDRVPMMADFDAALAAGVVEGVNMS 301
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
S ++ + + + L
Sbjct: 302 SRAAGSNFDAEIAVTANGGGTPSSSQVYRSDLSGGGTVNASGAAGDVSVGTNANNGVNLF 361
Query: 361 MEEMVSFID 369
V+ D
Sbjct: 362 THYAVTGTD 370
Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 37/96 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ +D+ + ++ IG+ +R+ + + R+VDAD
Sbjct: 1847 VRTREEAARSITVLDSALDSVSSQRAIIGAQINRLEHTITNLDTASLNLTASRSRIVDAD 1906
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+A E + L Q + L+ N + +L L
Sbjct: 1907 LAKEMMEFTKLNILVQSGMSVLAHSNQTHENVLRLL 1942
>gi|317051513|ref|YP_004112629.1| flagellin domain-containing protein [Desulfurispirillum indicum S5]
gi|316946597|gb|ADU66073.1| flagellin domain protein [Desulfurispirillum indicum S5]
Length = 833
Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats.
Identities = 54/376 (14%), Positives = 123/376 (32%), Gaps = 4/376 (1%)
Query: 1 MTS-ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M+S I N +++A LR + NL +R+SSGLR++ A+D+A+ +I++ M+
Sbjct: 1 MSSVIYNNIPSINAQNNLRVNSQNLSQSIERLSSGLRINRASDDASGLAISEKMRGQIRG 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQ 116
L G S + A+ +++ ++ ++ D + IQ E+ QL+
Sbjct: 61 LDRAVANAQDGISLIQTAEGALNETTAILQRMRELSVQAANGTLTSDDRQHIQREVDQLK 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
S++ I+ + FN + L D + ++ ++ + IRD + +
Sbjct: 121 SEIDRISTSTEFNTKKLLNGDATARWSTSDSDLMEAIIRDQVITGNYKIDVTAKVGKNQV 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
L S+ + + + + + A
Sbjct: 181 LKSNIMTLREGAFAGDVLTLAGVSVSASVNSSGIAGVYAAEGVRTGDITDRTYLVNVATT 240
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
+ + +I + + + S S + N + T
Sbjct: 241 SEIGASFNGDSILTLASISSGSMAINGTYQQAGSNWSVLSNGSGELENHNGMNVFATHGG 300
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + ++ T + + + T+NI +A +
Sbjct: 301 VVTGYHGYMEIEFLQDAHLTTGGSDVTGAARVRFISVTTGEAEAWATVNIVDNALSLGGL 360
Query: 357 EKLAMEEMVSFIDTQI 372
++ + F D +
Sbjct: 361 DQFDAGAQLLFNDGAM 376
Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 49/131 (37%)
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
+++ + S + + + ++ ID + +
Sbjct: 703 DNSMSFQIGANAGQTMSANIAQIDVKSLGIENVLVVSQELAQSAITDIDKALGMVSTERA 762
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
K+G+IS+R+ + + + + ++ R+ D ++A E ++ + Q Q A L+ N
Sbjct: 763 KMGAISNRLDHTINSLSVAYENLQAAESRIRDVNVAKEMSQFTLNQMLTQAAQSMLAQAN 822
Query: 441 NSTARILSLFR 451
I+ L R
Sbjct: 823 AIPQGIMQLLR 833
>gi|68164530|gb|AAY87259.1| predicted flagellin [uncultured bacterium BAC17H8]
Length = 845
Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats.
Identities = 47/359 (13%), Positives = 103/359 (28%), Gaps = 4/359 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT+I TN +A++A L N ++E ++SSG +V+ AAD+AA +IA M + L
Sbjct: 1 MTAINTNTAALNAQYYLAKSNKDMESSMAKLSSGQKVNSAADDAAGLAIASRMTAQIRGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQS 117
+ S A+ M + +++ I+ + S+ +E+ L++
Sbjct: 61 AMAVKNSNDSMSLAQTAEGAMEEVTNMLQRIRELAVQSANGTMNTGDRASLDAEVQALKA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +A +SFN +N L +T I + + T L
Sbjct: 121 EIDRVATTTSFNSQNLLDGSY-KATFQIGDKNGQTVGLKIGSVKTDSLGLGEGSSGTNTL 179
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
S + ++ + ++ + + A
Sbjct: 180 VSRRIPVAASLTGTFDIELASPVDAGDIQVNGQAIGAIALTDDMEDIIKNIHDNVDNVKA 239
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ TI + + + + + + + N
Sbjct: 240 SGFNVVTAKTIGNGITSDGDLTIRIAALGVPAASATTYKISASNSMEELVANINAEVNGA 299
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + T + + G + +
Sbjct: 300 VQASMNDDGKLVLSNETGATIQVIDDSATDGAYDGGSGFYGEDSFDPDPNNQGSDVLTT 358
Score = 122 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/333 (13%), Positives = 94/333 (28%)
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+I ++ NG N + + + +I + I + + +
Sbjct: 513 DEIGLTATANGNNLVLSGDNVQSLTINNETLDEKNDALTSTDTDAEIRPTAGTNSNHVVT 572
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
D + G D+ + + A +
Sbjct: 573 IQDADVKAGREFNLKLTGGVTANAFDVKYTAVSGDDAKKVAENLRGLILAAGGTNYDVAS 632
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
IA + + + + + +TT I
Sbjct: 633 ADGLSIADNTGNTVMTFNNASGKLVNGHATMTFKRSDDNDLFRASQTSGTESTTYGMIKL 692
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
D +VG L + D ++ + + +
Sbjct: 693 DSVGNAPIKIEVGENDVGTAFARHGLLEANVGAADFDVNEPTMSASGGKSMTGLSVTTAS 752
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ID I + G +G++ +R+ + + + +A GR++DAD A E+
Sbjct: 753 AANAALDTIDVAIDTVNSIRGDLGALQNRLEYTINNLSSISNATTGARGRILDADFAKET 812
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ L+ Q Q A L+ N S IL+L +G
Sbjct: 813 SELTKHQILTQAATSMLAQANQSKQGILALLQG 845
>gi|73666217|gb|AAZ79785.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Brandenburg]
gi|73666219|gb|AAZ79786.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Brandenburg]
gi|73666221|gb|AAZ79787.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Bredeney]
gi|73666223|gb|AAZ79788.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Brandenburg]
gi|73666225|gb|AAZ79789.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Bredeney]
gi|73666227|gb|AAZ79790.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Bredeney]
gi|73666229|gb|AAZ79791.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Brandenburg]
Length = 432
Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats.
Identities = 59/431 (13%), Positives = 114/431 (26%), Gaps = 48/431 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
I Q +D + + S + L+ +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKKYDVKSEAVKSGGGATLNTTGLNDAALKTGVGG 180
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ A ++ A G+ + V P TT T
Sbjct: 181 ATNGTAAIKDGKVFFDATDNKYFIEVEGLTAGDATKNGVYEVSVADDGTVTMPTTTKVTG 240
Query: 267 GSKSPSVAASATYIRMGNSDIW-------------------------------------- 288
G + + A + T +
Sbjct: 241 GMPATATAVTETQPKPVALSTAVKDQLTDSGISAADAAKGQLVTMSYTDKNGKTIDGGFG 300
Query: 289 -------VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
AT + T T + S
Sbjct: 301 VKVGANIYAATKNKDGSFSINTTEYTDKGGNTKTALNQLGGADGKTEVVSIDGKTYNASK 360
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ + A E ++ ID + A +G++ +R + + +
Sbjct: 361 AAGHNFKAQPELAEAAATTTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVN 420
Query: 402 AVEKGVGRLVD 412
+ R+ D
Sbjct: 421 NLSSARSRIED 431
>gi|73666195|gb|AAZ79774.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|73666197|gb|AAZ79775.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
Length = 427
Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats.
Identities = 53/426 (12%), Positives = 108/426 (25%), Gaps = 43/426 (10%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGS------------------------------------FIRDDNGKVQITTIDYYL 170
L
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQQKYKVSDTAATVTGYADTTIALDNSTFKASATGL 180
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA----T 226
+D + G + +VSV +G ++ +
Sbjct: 181 GGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKDGYYEVSVDKTNGKVTLAGGTTSPLTGG 240
Query: 227 TSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD 286
+ + L AA + + + + D
Sbjct: 241 LPATATEDVKNVQVANADLTEAKAALTAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGD 300
Query: 287 IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI 346
+ AT + T T + + S +
Sbjct: 301 DYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHN 360
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ A E + ID + +G++ +R + + + +
Sbjct: 361 FKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSA 420
Query: 407 VGRLVD 412
R+ D
Sbjct: 421 RSRIED 426
>gi|218708813|ref|YP_002416434.1| flagellin [Vibrio splendidus LGP32]
gi|218321832|emb|CAV17804.1| Polar flagellin B [Vibrio splendidus LGP32]
Length = 407
Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats.
Identities = 58/451 (12%), Positives = 126/451 (27%), Gaps = 70/451 (15%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 23 NVNTNVSAMTAQRYLNSANSAQQTSMERLSSGSKINSAKDDAAGLQISNRLNVQSRGLDV 82
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ D +IQ E+T L +L
Sbjct: 83 AVRNANDGISIAQTAEGAMNETSNILQRMRDLSLQSTNGSNTKADRVAIQEEVTALNDEL 142
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + +
Sbjct: 143 NRIAETTSFGGNKLLNGTHGTKSFQIGADNGEAVMLQLKDMRSDNDQMGG---------- 192
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + A + + ++
Sbjct: 193 -----------------------------NSYQFTEAKGKDWGVTAGANDLTMSLKDSFG 223
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
DQ + + A K+ I GN+ + +++
Sbjct: 224 DQREINISAKAGDDIEELATYINGQQDLVKASIDEEGKLQIFAGNNKVDGEIAFSGALSD 283
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ G T + T ++D + L ++ +
Sbjct: 284 ELGMTAGAKPEDPKTLEAKQVTVDSIDVTSVGGAQESVAVIDAALKYVDSHRSELGAFQN 343
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D + A+ + ++ + ++
Sbjct: 344 RFDHAINNLDNINENVNASKS-----------RIKDTDFAKETTQMTKSQI--------- 383
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLF 450
Q + L+ + LSL
Sbjct: 384 --------LSQASSSILAQAKQAPNSALSLL 406
>gi|73666275|gb|AAZ79814.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
London]
gi|73666277|gb|AAZ79815.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
London]
Length = 432
Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats.
Identities = 59/431 (13%), Positives = 114/431 (26%), Gaps = 48/431 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
I Q +D + + S + L+ +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKKYDVKSEAVKSGGGATLNTTGLNDAALKTGVGG 180
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ A ++ A G+ + V P TT T
Sbjct: 181 ATNGTAAIKDGKVFFDATDNKYFIEVEGLTAGDATXNGVYEVSVADDGTVTMPTTTKVTG 240
Query: 267 GSKSPSVAASATYIRMGNSDIW-------------------------------------- 288
G + + A + T +
Sbjct: 241 GMPATATAVTETQPKPVALSTAVKDQLTDSGISAADAAKGQLVTMSYTDKNGKTIDGGFG 300
Query: 289 -------VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
AT + T T + S
Sbjct: 301 VKVGANIYAATKNKDGSFSINTTEYTDKGGNTKTALNQLGGADGKTEVVSIDGKTYNASK 360
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ + A E ++ ID + A +G++ +R + + +
Sbjct: 361 AAGHNFKAQPELAEAAATTTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVN 420
Query: 402 AVEKGVGRLVD 412
+ R+ D
Sbjct: 421 NLSSARSRIED 431
>gi|319406786|emb|CBI80419.1| Flagellin [Bartonella sp. 1-1C]
Length = 399
Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats.
Identities = 101/450 (22%), Positives = 177/450 (39%), Gaps = 54/450 (12%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
TS+LTN SAM+A Q LR+I+ NL+ +DRVS+GLR+++A++N AYWSI+ +M+ D+ +S
Sbjct: 3 TSLLTNKSAMTALQTLRNIDANLDRSKDRVSTGLRINNASENTAYWSISSMMRHDSNTMS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
A+ DAI LG +V IA + + + I+ + + E+G+ D
Sbjct: 63 AIVDAINLGKEQVGIADTAIGLTKEALDDIQKSMVSAREKGS----------------DD 106
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA+ N +AS I S G + ++
Sbjct: 107 IAKIQDSILGNMRNISNAVQSASFGGKNILSNGGQTVGMAAGYRREGTAVYVDMIDVGGP 166
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ D + ++ + +T + + +A
Sbjct: 167 ELNFGVIGPDGAIDMSQGVLAGIFGTSKGESGEDVVAKGIEEFSTAHTKYKELEDAVTKA 226
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+A L A P +K+ A
Sbjct: 227 KADLAKAEAVLAANPEDAAAKKAVEDAKTAVKTAE------------------------- 261
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
D + +++ ++ + + +++ +
Sbjct: 262 -------------KAVDDGQKEYGEAKSAFQTVLNGMTLADFTELKGLGELHSDIQRMIL 308
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ + + + A KIG+ + +++Q +F+K + D +E G+G LVDADM +ES +
Sbjct: 309 TSVQNTVRDAVNVTLTAGSKIGAAVNLVNIQLNFVKKLLDNIEVGIGALVDADMNAESAK 368
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ALQ QQQL +QALSI N + IL+LFR
Sbjct: 369 LAALQVQQQLGIQALSIANQGSQNILALFR 398
>gi|73666187|gb|AAZ79770.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|73666189|gb|AAZ79771.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|73666191|gb|AAZ79772.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|73666193|gb|AAZ79773.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
Length = 427
Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats.
Identities = 50/426 (11%), Positives = 104/426 (24%), Gaps = 43/426 (10%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
I Q +D + + + Y +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQQKYKVSDTAATVTGYADTTIALDNSTFKASATGL 180
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ G + + + + +
Sbjct: 181 GGTDQKIDGDLKFDDTTGKYYAKVTVTGGTGKDGYYEVSVDKTNGEVTLAGGATSPLTGG 240
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + + A T +T + D
Sbjct: 241 LPATATEDVKNVQVANADLTEAKAALTAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGD 300
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAY------------------------------- 355
+ D S+ T T T
Sbjct: 301 DYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHN 360
Query: 356 ---------NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
E + ID + +G++ +R + + + +
Sbjct: 361 FKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSA 420
Query: 407 VGRLVD 412
R+ D
Sbjct: 421 RSRIED 426
>gi|307701396|ref|ZP_07638416.1| flagellin protein [Mobiluncus mulieris FB024-16]
gi|307613411|gb|EFN92660.1| flagellin protein [Mobiluncus mulieris FB024-16]
Length = 547
Score = 139 bits (348), Expect = 1e-30, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 54/161 (33%)
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
T ++ + + + + + + S +
Sbjct: 387 FTVDDTNRTIKMEMANGKNIDVDMDHCLTKLGNPAGTGDTNITLTPELVSGTKNWVKASI 446
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
NT + ++++S +D +I + A IG+I +R + + + + R+
Sbjct: 447 NTLKVDNHDEAQKLISVLDEKINSVSKARANIGAIQNRFEHTITNLNVAVENLAASESRI 506
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D DMA E + + Q Q L+ N +LSL R
Sbjct: 507 RDTDMAQEMMQFTRNQILSQAGTSMLAQANQVPQGVLSLLR 547
Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 24 LEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSK 83
L +++SSG R++ AAD+AA +I++ ++S G S + A+ +++
Sbjct: 39 LAKSLEKLSSGFRINRAADDAAGLAISEGLRSQVRGNRQAVRNAQDGISVIQTAEGALNE 98
Query: 84 AIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
++ ++ +I++E+ QL+ +L I + ++FNG L D
Sbjct: 99 VHSILQRMRTLAVQGANDTNDTKSRSNIRAELVQLRDELNRIGKVTNFNGTKLLNGDAS 157
>gi|149375026|ref|ZP_01892799.1| Flagellin and related hook-associated protein [Marinobacter
algicola DG893]
gi|149360915|gb|EDM49366.1| Flagellin and related hook-associated protein [Marinobacter
algicola DG893]
Length = 403
Score = 139 bits (348), Expect = 1e-30, Method: Composition-based stats.
Identities = 52/450 (11%), Positives = 125/450 (27%), Gaps = 50/450 (11%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I + +L+++N +L Q+++S+G RV+ +D+ + + + +
Sbjct: 1 MIRISSQQIFSGGINRLQELNSSLNQTQEQISTGKRVNKPSDDPVAAARILKLDQELSRI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
GL +++ ++ ++ ++DV+ I+ +S ++++ ++
Sbjct: 61 ETYQRNAGLAENRLQQEESALASSVDVIQRIRELTVQAGNGSLSPSDRKSISSEMKERIG 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A ++ + G ++ A S G ++ + D
Sbjct: 121 QLANIANTRDASGEYIFSGFQGSTAAFGKDASGSWVYQGDEGQRVLEIDDGVTVPISDHG 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+
Sbjct: 181 KGIYSSVPAAVFAESDPGNAAAAR------------------------------------ 204
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ ++ + + +V A + NS T + +
Sbjct: 205 ---------IDGIQVADDGALSAVSPDDITITVDTVAGTVSAVNSRTGDPLTVTPAAYTS 255
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ T E T + NI + +
Sbjct: 256 GESFEVAGVQATITDAGNGDEFTLRTGERQSVFATIENLIDGLDNIDKTSPAGQAAYDDL 315
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + +D + +IG + + + F++ E +L D D A +
Sbjct: 316 IAASLQNLDNAQESIVQKQTEIGGRLNAVDSTKSFLEDSSVYSEDIRSQLRDVDYAEAIS 375
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
LS Q A Q+ + V+ LSLF
Sbjct: 376 NLSFQSFVLQAAQQSFAQVSQ-----LSLF 400
>gi|2360972|gb|AAB69135.1| flagellin [Pseudomonas aeruginosa]
Length = 434
Score = 139 bits (348), Expect = 1e-30, Method: Composition-based stats.
Identities = 47/434 (10%), Positives = 118/434 (27%), Gaps = 36/434 (8%)
Query: 46 YWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERG 102
I+ + + L+ + G S A+ + ++ +++ I++
Sbjct: 1 GLQISNRLSNQISGLNVATRNANDGISLAQTAEGALQQSTNILQRIRDLALQSANGSNSD 60
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
D ++Q E+ Q++L I+ ++F G L G+++ + + +
Sbjct: 61 ADRAALQKEVAAQQAELTRISDTTTFGGRKLLDGSFGTTSFQVGSNAYETIDISLQNASA 120
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
Y + +S GT + V +K+I ++ D++ I+ K
Sbjct: 121 SAIGSYQVGSNGAGTVASVAGTATASGIASGTVNLVGGGQVKNIAIAAGDSAKAIAEKMD 180
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
A + ++ + + TS S +
Sbjct: 181 GAIPNLSARARTVFTADVSGVTGGSLNFDVTVGSNTVSLAGVTSTQDLADQLNSNSSKLG 240
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL----------- 331
+ I + + + + +
Sbjct: 241 NTASINDKGVLTITSATGENVKFGAQTGTATAGQVAVKVQGSDGKFEAAAKNVVAAGTAA 300
Query: 332 ----------------------PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ + + + + + ++ +D
Sbjct: 301 TTTIVTGYVQLNSPTAYSVSGTGTQASQVFGNASAAQKSSVASVDISTADGAQNAIAVVD 360
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ A + ++ +R D + + + R+ D D A+E+ LS Q Q
Sbjct: 361 NALAAIDAQRADLSAVQNRFKNTIDNLTNISENATNARSRIKDTDFAAETAALSKNQVLQ 420
Query: 430 QLAVQALSIVNNST 443
Q L+ N
Sbjct: 421 QAGTAILAQANQLP 434
>gi|307318921|ref|ZP_07598352.1| flagellin domain protein [Sinorhizobium meliloti AK83]
gi|17380477|sp|Q52942|FLAD2_RHIME RecName: Full=Flagellin D
gi|12057228|gb|AAB81421.2| FlaC [Sinorhizobium meliloti]
gi|306895335|gb|EFN26090.1| flagellin domain protein [Sinorhizobium meliloti AK83]
Length = 395
Score = 139 bits (348), Expect = 1e-30, Method: Composition-based stats.
Identities = 101/451 (22%), Positives = 160/451 (35%), Gaps = 57/451 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AM+A Q LR I+ N+E Q RVSSGLRV A+DNAAYWSIA M+SD
Sbjct: 1 MTSILTNVAAMAALQTLRGIDSNMEETQARVSSGLRVGTASDNAAYWSIATTMRSD---- 56
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ S V A + +D V+ +E +++++
Sbjct: 57 -------NMALSAVQDALGLGAAKVDTAYAGMENAVEVVKEIRAKLVAATEDGVDKAKIQ 109
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ +
Sbjct: 110 EEIEQLKQQLTSIATAAS------------------------------------------ 127
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
L + V V+ + + N D
Sbjct: 128 ---FSGENWLQADLTAPVTKSVVGSFVRDSSGVVSVKTIDYVLDGNSVLFDTVGNNGILD 184
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ ++ V L + + + + + GN +
Sbjct: 185 KVYDVSESSVTLSINTGGVVSEHTVAAY-TVDDLIAGGAVFQGNYALAGGVNYVKVEGVW 243
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
S+ A + + S+ + + +
Sbjct: 244 VEAVASSGAPGQEVAAVTTAAAPITADSWAVDTTAGPAASVPAPASIENIDITNAAQAAN 303
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ++ +D ++ +A +GSIS RI +QE+F+ + D+++ G+GRLVDADM EST
Sbjct: 304 LDALIRGVDEALEDLISATSALGSISMRIGMQEEFVSKLTDSIDSGIGRLVDADMNEEST 363
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQTQQQLA+Q+LSI N ++ IL LFR
Sbjct: 364 RLKALQTQQQLAIQSLSIANTNSENILQLFR 394
>gi|291280392|ref|YP_003497227.1| flagellin domain protein [Deferribacter desulfuricans SSM1]
gi|290755094|dbj|BAI81471.1| flagellin domain protein [Deferribacter desulfuricans SSM1]
Length = 775
Score = 139 bits (348), Expect = 1e-30, Method: Composition-based stats.
Identities = 51/377 (13%), Positives = 115/377 (30%), Gaps = 7/377 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N S+++A + L N + +R+SSGLR++ AAD+A+ +I++ ++ L
Sbjct: 5 IYNNISSLNAQRYLGITNSQMSKSLERLSSGLRINHAADDASGLAISEKLRGQISGLKRA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ G+ + ++ ++ D +Q E+ QL+S++
Sbjct: 65 SMNAQDGISMLQTAEGGLQEIQSIVQRMRELAVQAANGTYTANDRAELQKEVDQLKSEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L D + ++ + + ++ +
Sbjct: 125 RISASTEFNTKKLLNGDASALWSASSNKLEAIIKGKVAEGEYSVSVTSSAGKNYIYKTDI 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
E + + + ++ S K+ T AA
Sbjct: 185 MTIGETNSYGEVDSSSGASWKNAVKSIDNIEGFDSGSSVTLAKVDTDGTTSDDAAAVLGY 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
++ A + + + S + T A ++
Sbjct: 245 TGGANVSLANNGTAYDVSASGYLEVEFLAATSANENDTSTSSSTQTRIANAARVRFYNAE 304
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
GY + V + + T D+ + + N+
Sbjct: 305 TGYVSDWVNVDLDYISGDGSNDTNPDTEFIELNSSSGLTTDGSTNLFSAGGLRIITTNDN 364
Query: 361 MEEMVSFIDTQIKCATA 377
+ D + +
Sbjct: 365 ----IGVGDKAVISLSD 377
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 40/100 (40%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
+ + ++ + ++ ++ ID ++ + A IG+ +R+ + R
Sbjct: 664 AQIDTKSLDLDNVLVVDQESAQKAITKIDRALEFISGARSTIGAQVNRLEHAITNLDTAR 723
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
+ + R+ D D+A E + Q QQ + L+ N
Sbjct: 724 ENLTASESRIRDLDIAEEMANFTRYQILQQSSTAMLAQAN 763
>gi|94270092|ref|ZP_01291650.1| Flagellin-like:transferase hexapeptide
repeat:Haemagluttinin:Flagellin hook IN [delta
proteobacterium MLMS-1]
gi|93450943|gb|EAT01936.1| Flagellin-like:transferase hexapeptide
repeat:Haemagluttinin:Flagellin hook IN [delta
proteobacterium MLMS-1]
Length = 1327
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 4/204 (1%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
MT I TN +AM+A ++ L ++SSGLR++ AAD+A+ +IA +KS
Sbjct: 18 MTMRINTNIAAMNAHNNMQKNGNALSDSLQKLSSGLRINKAADDASGMAIADSLKSQALG 77
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQ 116
L G S V A + ++I++++T+K K + G +IQ++I +L
Sbjct: 78 LGQAIRNANDGISMVQTADGALEESINIINTVKTKAIQAAQDGQTQESRAAIQADINKLL 137
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
QL +IA+ +SFN + L + + I +
Sbjct: 138 EQLDNIAKTTSFNNQKLLSGNFTNKAFQIGAYSQETVNISVASSESTKIGHISSATMDFG 197
Query: 177 LDSSTDGTERYGLLDRNHKIKVEP 200
+ +N +
Sbjct: 198 STGVGTSSLSIHSSIQNETYDLST 221
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 33/80 (41%)
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
K +GS+ +++ I + R + + D D E++ S LQ Q
Sbjct: 1248 KDLNKVRADLGSVQNQLTSTISNISVTRVNINAAESAIRDVDFGDEASTFSKLQILNQAG 1307
Query: 433 VQALSIVNNSTARILSLFRG 452
A++ N + +LSL +G
Sbjct: 1308 SFAMAQANATGETVLSLLQG 1327
>gi|288574714|ref|ZP_06393071.1| flagellin domain protein [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570455|gb|EFC92012.1| flagellin domain protein [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 775
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N A+ A L N NL+ +++S+GLR++ AAD+AA +I++ M++ L
Sbjct: 3 VYHNVPALFAYNSLSATNNNLQKSINKLSTGLRINSAADDAAGLAISEKMRAQINGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ G S + A+ +++ ++ ++ D IQ E+ QL+ ++
Sbjct: 63 TSNAQDGISMIQTAEGALNETHSILQRMRELSVQAANDTLTSQDRDYIQIEVDQLKEEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I+ + FN + L +S
Sbjct: 123 RISTTTQFNKKKLLDGSASVLWSSDN 148
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 40/379 (10%), Positives = 105/379 (27%), Gaps = 5/379 (1%)
Query: 73 KVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGEN 132
++ A + ++ V+ A + ++ + QLRD+ + NG
Sbjct: 402 YLNTANGTLYQSDTVLEFNTAFAAADATLAGFDAAYVGQVAKGDVQLRDLDKFWDANGRF 461
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
L + + + + + + DG +
Sbjct: 462 MLEDAQPITVTQGDGTQTSITLNSTDTLRDVEIKLNDAIAFGLGQAKYLDGNTDRFVDFI 521
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + ++ V + +G + + + +
Sbjct: 522 EGETDNTSESVEGTFVIRS-----VVAGSDGEINFAGDEDVIKALSLNVIQESTESQYDV 576
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A T ++ + ++ + + + T + +T +
Sbjct: 577 TVNDAHSGNTIASNVKVTGNMLYGVVHKNVDVQFDAMADTNVEWSEDAKSFRLTTDSDDT 636
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+++T+ KE + + ++ + ++ ID+ I
Sbjct: 637 YETVIHLADNSTVFQIGANEKEDMGISIGDMGSEALGIDGLLVTDRESAARSITVIDSAI 696
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ +G+ +R+ + + + + R+ D DMA E + L Q
Sbjct: 697 DTVSKQRANLGAYQNRLDHTINNLTIASQNLTSAESRIRDLDMAKEMMNFTKLNILSQAG 756
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 757 TNMLAQANQLPQNVLSLLR 775
>gi|86211120|gb|ABC87257.1| flagellin [Xanthomonas campestris pv. campestris]
Length = 399
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 51/449 (11%), Positives = 118/449 (26%), Gaps = 53/449 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++ + L + ++ + ++SSG R++ A+ +AA +I++ + L
Sbjct: 4 VINTNVMSLNTQRNLNTNSSSMALSIQQLSSGKRITSASVDAAGLAISERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
S + + +A+ +++ G + S
Sbjct: 64 ASR---NANDGISLAQTAEGAMVEI----------GNNLQRIRELSVQSANATNSATDRE 110
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A S + + T+ ++ +V V + +
Sbjct: 111 ALNSEVKQLTSEVDRVANQTSFNGTKLLNGDFSGALFQVGADAGQTIGSNSIVDANVDSL 170
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
G + + + K A ++
Sbjct: 171 GKANFAASVSGAGVTGAATASGSLSGITLAFKDASGAAKSVAVADIKIASGDTAADINKK 230
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
A A TSG +S T + G S T
Sbjct: 231 VASAINDKLDQTGMYASIDTSGNVKLESLKAGQDFTSLSGGTSGAAGITAGAGIQT---- 286
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
S + + ++ + +
Sbjct: 287 ------------------------------------ASAASGSTASTLSSLDISTFSGAQ 310
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ + +D + ++ +G++ +R + + + R+ D D A + L
Sbjct: 311 KALEIVDKALTSVNSSRADMGAVQNRFTSTIANLAATSENLTASRSRIADTDYAKTTAEL 370
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q QQ L+ + +LSL +
Sbjct: 371 TRTQILQQAGTAMLAQAKSVPRNVLSLLQ 399
>gi|73666269|gb|AAZ79811.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Derby]
Length = 437
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 56/437 (12%), Positives = 113/437 (25%), Gaps = 53/437 (12%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SS LR++ A D+AA +IA S+ L+ S G S + +++ + +
Sbjct: 1 RLSSSLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTDL-------- 138
++ SIQ EI Q ++ ++ + FNG L D
Sbjct: 61 RVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGA 120
Query: 139 --------------------------GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
G A++ Y +D
Sbjct: 121 NDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDTYAAGADKYRVDI 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + + + + N ++ + T T + K +
Sbjct: 181 NSGAVVTDAVAPNKVYVNAANGQLTTDDAENNTAVDLFKTTKSTAGTAEAKAIAGAIKGG 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSG----------------TSGSKSPSVAAS 276
K + + +TT + + + +
Sbjct: 241 KEGDTFDYKGVTFTIDTKTGNDGNGKVSTTINGEKVTLTVADITGGAANVDAATLQSSKN 300
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + T S N+ V + K
Sbjct: 301 VYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKGESKITVNGAEYTANATGDKVTLAGKT 360
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
++ N DA K + ++ ID+ + A +G+I +R +
Sbjct: 361 MFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGAIQNRFDSAITNL 420
Query: 397 KLMRDAVEKGVGRLVDA 413
+ R+ DA
Sbjct: 421 GNTVTNLNSARSRIEDA 437
>gi|319898451|ref|YP_004158544.1| flagellin [Bartonella clarridgeiae 73]
gi|6686945|emb|CAB64773.1| flagellin A [Bartonella clarridgeiae]
gi|319402415|emb|CBI75956.1| Flagellin [Bartonella clarridgeiae 73]
Length = 399
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 97/450 (21%), Positives = 169/450 (37%), Gaps = 54/450 (12%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
TS+LTN SAM+A Q LR I+ NL+ +DRVS+GLR+S+A++N AYWSI+ +M+ D+ +S
Sbjct: 3 TSLLTNKSAMTALQTLRSIDANLDRSKDRVSTGLRISNASENTAYWSISSMMRHDSNTMS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
A+ DAI LG +V IA + + + I+ + + + +I ++Q +
Sbjct: 63 AIVDAINLGKEQVGIADTAIGLTKEALDDIQKSMVS------AREKGSDDIAKIQDSI-- 114
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I + + + G + S +G + + + +
Sbjct: 115 IGNMKNISNAVQSASFGGKNILSNGGQTVGMAAGYRREGTAVYVDMIDVGGSELNFGTIG 174
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
I + + DV + +
Sbjct: 175 SDGTIDMSQGVLGGIFGTSKGDEGEDVVGKGIGAFSAA-----------------HATYK 217
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A A ++ A
Sbjct: 218 GLEDTLRNAEADLAKAIAKYGESPEDEPGKAIIEKAKQAVETAKTGLK------------ 265
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
D + ++ + +D + + +++ M
Sbjct: 266 -----------------DGQEAYNKAKGEFQTVLDGMTLADFTELKGLGELHSDIQRMIM 308
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ + + + A KIG+ + +++Q +F+K + D VE G+G LVDADM +ES +
Sbjct: 309 TSVQNTVRDAVNVTLTAGSKIGAAVNLVNIQLNFVKKLLDNVEVGIGALVDADMNAESAK 368
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ALQ QQQL +QALSI N + IL+LFR
Sbjct: 369 LAALQVQQQLGIQALSIANQGSQNILALFR 398
>gi|149182546|ref|ZP_01861018.1| flagellar protein [Bacillus sp. SG-1]
gi|148849738|gb|EDL63916.1| flagellar protein [Bacillus sp. SG-1]
Length = 796
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 61/428 (14%), Positives = 118/428 (27%), Gaps = 15/428 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++A + L +++SSGLR++ AAD+AA +I++ M+S L
Sbjct: 3 INHNIQALNAYRNLSQTMGQTSKSLEKLSSGLRINRAADDAAGLAISEKMRSQIRGLGMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
S + A+ +S +++ ++ D +SIQ E+ QL +++
Sbjct: 63 ERNSLDAISLIQTAEGALSSTHEILQRMRELAVQASNGTLEDEDRQSIQEEVNQLTTEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN + L + + + K L + S
Sbjct: 123 RIGNSTEFNRKKLLNS-----QIAPNARAMEIDAEAGFNKGTTELEGTSLTLDPKSELVS 177
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D R + V + ++ T + +
Sbjct: 178 GDYNVRVEDVYTKTVSASGTPAAGISSVGLTSTDTSLDTGTYGVKVQEEQVKAVVGDPAS 237
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ I V + T + + S + +
Sbjct: 238 TSPIADEITVAPNSNLGDGPVTLEVKKENAVASFQSNGSGISNVEITSATPDLNETDSFK 297
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
N T +D+ K D +++ T + A
Sbjct: 298 VDVVNKPSEVEVGTLTKTFISDIDVDTAKFGQAGNDFQLEYTETTPGQYSVTLKDSAGKA 357
Query: 361 MEEMVSFIDTQIK-CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + V + +IG + + G + D D E
Sbjct: 358 LSDAVILDNNMQDYKFYNNGSEIGVS---FKTVSNVNAALTAEGADGENNVFDID--KEI 412
Query: 420 TRLSALQT 427
T LS
Sbjct: 413 T-LSKNNI 419
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 38/327 (11%), Positives = 79/327 (24%), Gaps = 2/327 (0%)
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
F T + V S G T +
Sbjct: 472 TDGFTTRGTEFDPGDEITLNGGIFVKTSSDASQYGVPSNTLDMTLETRMGHTAELVDANG 531
Query: 185 ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKG 244
+ + + +D+ + A +
Sbjct: 532 DTAAGSRKVTVENNGSYSFGEPTNISFDSGVLAAGTFEFTVGQVSTTNATLEAAGTPLET 591
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
+ I + A + + + S + S + +
Sbjct: 592 LENITSNSTLSFADGELSMNIGELTNGNATFSIKGGTVNQSIQFHIGANEGQTLEMGIED 651
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
+++ ++ D+++ L + S + N +A +
Sbjct: 652 MRSLSVGISSTVSGDSKNIVSKDGNTLTVQFASISGVENGNQAEYA--IDLSTSENANAA 709
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ D I + K+G+I +R+ + + + R+ DADMA E T +
Sbjct: 710 IEAYDQAIAKVSEQRSKLGAIQNRLEHTITNLTTANENLTSAESRIRDADMAKEMTTFTK 769
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q LS N IL L +
Sbjct: 770 NNILNQAGQAMLSQANQLPQGILQLLK 796
>gi|94265618|ref|ZP_01289361.1| Flagellin-like:transferase hexapeptide repeat:Flagellin hook IN
[delta proteobacterium MLMS-1]
gi|93453859|gb|EAT04220.1| Flagellin-like:transferase hexapeptide repeat:Flagellin hook IN
[delta proteobacterium MLMS-1]
Length = 1327
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 4/204 (1%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
MT I TN +AM+A ++ L ++SSGLR++ AAD+A+ +IA +KS
Sbjct: 18 MTMRINTNIAAMNAHNNMQKNGNALSASLQKLSSGLRINKAADDASGMAIADSLKSQALG 77
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQ 116
L G S V A + ++I++++T+K K + G +IQ++I +L
Sbjct: 78 LGQAIRNANDGISMVQTADGALEESINIINTVKTKAIQAAQDGQTQESRAAIQADINKLL 137
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
QL +IA+ +SFN + L + + I +
Sbjct: 138 EQLDNIAKTTSFNNQKLLSGNFTNKAFQIGAYSQETVNISVASSESTKIGHISSATMDFG 197
Query: 177 LDSSTDGTERYGLLDRNHKIKVEP 200
+ +N +
Sbjct: 198 STGVGTSSLSIHSSIQNETYDLST 221
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 33/80 (41%)
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
K +GS+ +++ I + R + + D D E++ S LQ Q
Sbjct: 1248 KDLNKVRADLGSVQNQLTSTISNISVTRVNINAAESAIRDVDFGDEASTFSKLQILNQAG 1307
Query: 433 VQALSIVNNSTARILSLFRG 452
A++ N + +LSL +G
Sbjct: 1308 SFAMAQANATGETVLSLLQG 1327
>gi|34558473|ref|NP_908288.1| flagellin B [Wolinella succinogenes DSM 1740]
gi|34484192|emb|CAE11188.1| FLAGELLIN B [Wolinella succinogenes]
Length = 513
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 69/509 (13%), Positives = 145/509 (28%), Gaps = 61/509 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A N +L +++SSGLRV+ AAD+A+ +IA ++S +L
Sbjct: 5 INTNVAALNAHAIGVQNNRSLNSSLEKLSSGLRVNKAADDASGMAIADSLRSQAASLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + I ++ TIK K + K++QS+I +L +L
Sbjct: 65 TRNANDAIGIIQTADKAMDEQIKILDTIKTKAVQAAQDGQTTETRKALQSDILRLLEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I + L+ ++ S
Sbjct: 125 NIANTTSFNGQEMLSGSFVNKEFQIGAYSNTTIKASIGATSSNKIGHVRLETSSISASSM 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
L + K+ +V ++ + +
Sbjct: 185 LASAGGSNLTEVAFKVLQVDGKNSFQLETVKISTSAGTGIGALAEVINKNSNVLGVRASY 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ G ++P+ + + + + +
Sbjct: 245 EVMGTGSLPIQSGTVNTLVINGVTIGTINDIQKNDADGKLINAINAVKEATGVEAYTDIS 304
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS-----------GYSMVTLNITRH 349
T + + V V ++ T
Sbjct: 305 GRLTLKSTDGRAISVSTVSGAGVLGGGSFIGTSGSSHAIVGRLTLTRLNARDVLISGTNF 364
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS---------------------- 387
++ ++ + E V+ D + + A G+ ++
Sbjct: 365 SHVGFHSAQGIAEYTVNLRDLRGEMNANIASAAGANANLAIASANANGIGAGVTSLAGAM 424
Query: 388 -----------RIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRL 422
++ + ++ + + + D D A ES
Sbjct: 425 IVMDMAESARIQLDKIRADLGSVQAQLTSTINNITVTQVNVAAAESEIRDVDFAEESATF 484
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 SKHNILAQSGSFAMAQANTVQQNVLKLLQ 513
>gi|73666279|gb|AAZ79816.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Heidelberg]
Length = 425
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 54/424 (12%), Positives = 109/424 (25%), Gaps = 41/424 (9%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 K----------SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
+ + D VQ S ++ +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQQKYKVSDTAATVTGYTDSATAIDKSTFTASATTL 180
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
P + D+ AA+ +
Sbjct: 181 GGTPAITGDLKFDDTTGKYYADVSGTTAKDGVYEVTVAADGKVTLTGTPTGPITAGFPST 240
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNS----------------------------DIW 288
A + + + A +A + D +
Sbjct: 241 ATKDVKQTQQENADLTEAKAALTAAGVAAAGTASVVKMSYTDNNGKTIDGGLAVKVGDDY 300
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR 348
AT + T T + + S + +
Sbjct: 301 YSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFK 360
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
A E + ID + +G++ +R + + + +
Sbjct: 361 AQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARS 420
Query: 409 RLVD 412
R+ D
Sbjct: 421 RIED 424
>gi|73666201|gb|AAZ79777.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Virchow]
gi|73666203|gb|AAZ79778.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Virchow]
gi|73666205|gb|AAZ79779.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Infantis]
gi|73666207|gb|AAZ79780.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Infantis]
gi|73666255|gb|AAZ79804.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Infantis]
gi|73666273|gb|AAZ79813.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Heidelberg]
Length = 425
Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 54/424 (12%), Positives = 109/424 (25%), Gaps = 41/424 (9%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 K----------SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
+ + D VQ S ++ +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQQKYKVSDTAATVTGYTDSATAIDKSTFAASATTL 180
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
P + D+ AA+ +
Sbjct: 181 GGTPAITGDLKFDDTTGKYYADVSGTTAKDGVYEVTVAADGKVTLTGTPTGPITAGFPST 240
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNS----------------------------DIW 288
A + + + A +A + D +
Sbjct: 241 ATKDVKQTQQENADLTEAKAALTAAGVAAAGTASVVKMSYTDNNGKTIDGGLAVKVGDDY 300
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR 348
AT + T T + + S + +
Sbjct: 301 YSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFK 360
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
A E + ID + +G++ +R + + + +
Sbjct: 361 AQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARS 420
Query: 409 RLVD 412
R+ D
Sbjct: 421 RIED 424
>gi|108810759|ref|YP_646526.1| flagellin [Yersinia pestis Nepal516]
gi|165939040|ref|ZP_02227592.1| flagellin [Yersinia pestis biovar Orientalis str. IP275]
gi|167418993|ref|ZP_02310746.1| flagellin [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|229842814|ref|ZP_04462966.1| lateral flagellin [Yersinia pestis biovar Orientalis str. India
195]
gi|229900957|ref|ZP_04516081.1| lateral flagellin [Yersinia pestis Nepal516]
gi|108774407|gb|ABG16926.1| flagellin [Yersinia pestis Nepal516]
gi|165912996|gb|EDR31621.1| flagellin [Yersinia pestis biovar Orientalis str. IP275]
gi|166962987|gb|EDR59008.1| flagellin [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|229682296|gb|EEO78388.1| lateral flagellin [Yersinia pestis Nepal516]
gi|229690081|gb|EEO82138.1| lateral flagellin [Yersinia pestis biovar Orientalis str. India
195]
gi|320016699|gb|ADW00271.1| lateral flagellin [Yersinia pestis biovar Medievalis str. Harbin
35]
Length = 407
Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 68/454 (14%), Positives = 127/454 (27%), Gaps = 52/454 (11%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN SA +A L + R+S+G R++ ADNAA I M+ +
Sbjct: 3 LSIHTNASAKTAINSLSNEGLANAKSSQRLSTGFRINSPADNAAGLQITNRMEKFLNSAG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
I + + IA G+++++ ++ +K T D ++IQ E ++L +
Sbjct: 63 QAKQNIQESIAMLQIADGGLAESVKTLNAMKKLATQAANDTNSAADREAIQKEFSELGKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L++ + +N E +S + + + L
Sbjct: 123 LQNALNNTEYNSEKLFADGGKMRKELNFQSGTDAESSLKLDLNSVIAELTESVTKPGLKA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+S E L K + +T K G A+
Sbjct: 183 NSGGTAEEKELARLEGLAKDAKSTAATTKSAETTLLVDDATGKGGKGGKGGKGGNASIDI 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
A T A+ + + + A + K+S
Sbjct: 243 IIPAHKDTTGKDVAEKKIASGTAITPANITSMADAKAYWDKQEIETPKAVNEYVVKHS-- 300
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+K
Sbjct: 301 -----------------------------------------------ADSGVMNMQLADK 313
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+ + I A +G+ +R+ + + M + +G + D D A E
Sbjct: 314 DLAMKADKKLSDVIDAYGAFRATLGANQNRLQSSSNNLDNMISNTAQALGSIKDTDFADE 373
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + Q +V L N +T I +L +G
Sbjct: 374 MKNHAQSEMLMQSSVMMLKKANAATQLISTLLQG 407
>gi|312879814|ref|ZP_07739614.1| flagellin domain protein [Aminomonas paucivorans DSM 12260]
gi|310783105|gb|EFQ23503.1| flagellin domain protein [Aminomonas paucivorans DSM 12260]
Length = 777
Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N A+ A L N L+ +++S+GLR++ AAD+AA +I++ M++ L
Sbjct: 6 NIPALFAYNSLSSTNTALQKSINKLSTGLRINSAADDAAGLAISEKMRAQIRGLDQAVRN 65
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIA 123
G S + A+ +++ ++ ++ D + IQ E+ QL+ ++ IA
Sbjct: 66 SQDGISMIQTAEGALNETHSILQRMRELGVQAANDTLTSQDRRYIQDEVEQLKQEVDRIA 125
Query: 124 RGSSFNGENWLRTDLGSSTAS 144
+ FN + L + +S
Sbjct: 126 STTQFNKKKLLDGSAAALWSS 146
Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats.
Identities = 44/380 (11%), Positives = 102/380 (26%), Gaps = 7/380 (1%)
Query: 73 KVDIAKAGMSKAIDVMSTIKNKITAGVER-GTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
++ A + ++ V++ + A E G + ++ + QLRD+ + NG
Sbjct: 404 YLNTANGTLYESDLVLTFNTSFAVATAEGLGHFEAAYVGQVAKGDVQLRDLDKFWDANGR 463
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
L + + + + + + G +
Sbjct: 464 FLLEDAQQIVLTQGDGNQVKVTLNSTDTLRDVENKFNDAIAFGLGQAKYLAGNTDRFVDF 523
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
P+ ++ V +G T F L
Sbjct: 524 VEDATANSPESVEGTFVIRSVIAGKAGTLNFAGDEDVIKALSLNVIQDSTESQYRVTVQD 583
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + T V + +++ V + TN+ +
Sbjct: 584 AHSGNTIASNVKVTGNMLYGVVHPNVDMEFDAMANVDVAWSDSAKSFRLTRDTNNYETIL 643
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ + + G + ++ ++ + ++ ID
Sbjct: 644 HLADNTTVFQIGANEKEDMGANIGNMGARALGVHSVLM------TDRESAARSITIIDNA 697
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I + +G+ +R+ + + + + R+ D DMA E + L Q
Sbjct: 698 IDRVSTQRSSLGAYQNRLEHTINNLTVAGQNLTAAESRIRDLDMAKEMMNFTRLNILMQA 757
Query: 432 AVQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 758 GNSMLAQANQLPQAVLSLLR 777
>gi|19910961|dbj|BAB87729.1| flagellin protein FliA(S) [Clostridium septicum]
Length = 384
Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 58/141 (41%), Gaps = 3/141 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA SI++ M+ L
Sbjct: 3 INHNMNAMNAHRNMASNTVATGKSMEKLSSGLRINRAGDDAAGLSISEKMRGQIRGLEQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + + +++ ++ ++ D + E+ QL ++
Sbjct: 63 SRNSQDGISLIQTTEGALNETHSILQRMRELSVQASNDTNTAEDRGQLSKELDQLTQEID 122
Query: 121 DIARGSSFNGENWLRTDLGSS 141
I+ + FN + L
Sbjct: 123 RISSQTQFNKMDVLNGKGDEP 143
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 37/95 (38%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
LA + ID I+ + ++G+ +R+ + + ++ R+ D DMA
Sbjct: 290 SHLAATSSIKEIDKAIEKVSTQRSQLGAYQNRLEHTIKNVDNAAENLQAAESRVRDVDMA 349
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+E S Q A L+ N +L L R
Sbjct: 350 NEMMTFSKNNILTQAAQAMLAQANQQPQGVLQLLR 384
>gi|322378383|ref|ZP_08052838.1| flagellin A [Helicobacter suis HS1]
gi|322380265|ref|ZP_08054485.1| flagellin A [Helicobacter suis HS5]
gi|321147302|gb|EFX41982.1| flagellin A [Helicobacter suis HS5]
gi|321149196|gb|EFX43641.1| flagellin A [Helicobacter suis HS1]
Length = 519
Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 64/513 (12%), Positives = 140/513 (27%), Gaps = 66/513 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +A++A +L+ +R+SSGLR++ AAD+A+ +IA ++S +L
Sbjct: 6 VNTNINALNAHAVGLVTQRDLKESLERLSSGLRINKAADDASGMTIADSLRSQAKSLGQA 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQSQLR 120
G + IA M + I ++ TIK K T + K++Q++I +L L
Sbjct: 66 ISNTNDGMGIIQIADKAMDEQIKILDTIKTKATQAAQDGQNTQSRKALQADIVRLIQSLD 125
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +S+NG+ L + + + + +++ +
Sbjct: 126 NIGTTTSYNGQTLLSGAFSNKEFQVGAYSNETIKASIGSATSDKIGQTKIVTGSLITAAG 185
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV-----SVYDASGTISTKKFKLATTSGAWLKAA 235
+ + ++ + + +T A A
Sbjct: 186 EVALTFKQVNGTHDVTLESVKISTSAGTGLGVLAEVINKNSNATGVRATANVISTSDTAV 245
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
+ + + + ++ + + + + +
Sbjct: 246 RSGNLDNIVLNGVHIGNVVGIKKNDSDGRLIAAINAVTSQTGVEAYTDAKGRLNLRSLDG 305
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
S K G+ +DT + +
Sbjct: 306 RGISLKVDDEGGNQKGGSGVMALDTMNGGQKVTNGSLNFGRLSLVRQDARDILIVSGANV 365
Query: 356 NEKLAMEEMV--SFIDTQIKCAT----------AAAGKIGSISSR--------------- 388
+ A + + +T A G+ ++
Sbjct: 366 TDPNAGYKAIGFGKGETASTTVNLRDVLGEFNQAVRSASGANYNKTIAAENLTLGSGVTT 425
Query: 389 ------------------------IHLQEDFIKLMRDAVE-------KGVGRLVDADMAS 417
+ ++ + + + ++ D D A
Sbjct: 426 LKGAMVVMDIAESAQKMLDKIRSDLGSVQNQMVSTVNNITITQVNVKAAESQIRDVDFAE 485
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
ES S Q A+S N IL L
Sbjct: 486 ESANFSKNNILAQSGSYAMSQANTVQQNILRLL 518
>gi|88799030|ref|ZP_01114611.1| Flagellin and related hook-associated protein [Reinekea sp. MED297]
gi|88778257|gb|EAR09451.1| Flagellin and related hook-associated protein [Reinekea sp. MED297]
Length = 418
Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 41/427 (9%), Positives = 104/427 (24%), Gaps = 40/427 (9%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ + NL ++++SG ++ AD+ + + + L+ I L S++
Sbjct: 16 NDMLRLQSNLNKTSEQIASGKKMLSPADDPVGAARVLQLDQEIALLNQYERNITLLDSRL 75
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVE----RGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ + + V+ ++ ++ ++I E+ + +L D+A +G
Sbjct: 76 EQEEGVLDGVTSVLQRVRELTVQAGNAAVYSESERQAIALELDERLKELFDLANSRDGSG 135
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
E G + G + D G + + + +
Sbjct: 136 EYLFSGFQGEKQTFVQNPGGGYGYQGDEGVRFLQISRTITMASGDTG------KDIFMDV 189
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
++ S I+ + L
Sbjct: 190 PATVPSFNSYASNENRGNPPGIISQGITVDQEALDEFFPENAVITFENPLDVDPPRKNYT 249
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
+ S S A + + +
Sbjct: 250 VRQKSDGRVIDGLENIPYNSGSPIGFAGMNVNVIGNPAPGDQFIVETSPSQNMMVTVEKL 309
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ Y + + + + ID
Sbjct: 310 TFALNNYSTSPEFSDVYDTAISNT------------------------------LENIDN 339
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
++ + +IG+ + + + A + + D D A +RL + Q
Sbjct: 340 ALQNVSQVRARIGARLNTTENTANQHADNKLAAQDIRADIRDLDYAEAVSRLQLEEFILQ 399
Query: 431 LAVQALS 437
Q+ +
Sbjct: 400 ATQQSFA 406
>gi|269792284|ref|YP_003317188.1| flagellin domain-containing protein [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269099919|gb|ACZ18906.1| flagellin domain protein [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 780
Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N A+ A L N NL+ +++S+GLR++ AAD+AA +I++ M++ L
Sbjct: 3 VYHNIPALFAYNSLSATNNNLQKSINKLSTGLRINSAADDAAGLAISEKMRAQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ D IQ EI QL+ ++
Sbjct: 63 VRNSQDGISMIQTAEGALNETHSILQRMRELSVQAANDTLTQQDRSYIQDEIDQLKDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTAS 144
I+ + FN + L +S
Sbjct: 123 RISSTTQFNKKKLLDGSAAVLWSS 146
Score = 127 bits (317), Expect = 5e-27, Method: Composition-based stats.
Identities = 41/397 (10%), Positives = 97/397 (24%), Gaps = 10/397 (2%)
Query: 55 SDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQ 114
S ++ A + ++ V++ + G + + +
Sbjct: 394 SQVAGKDVHFRNF-----YLNTANGTLYESDIVLTLSTSFTATGATLAAFDAAYVGQTAE 448
Query: 115 LQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
QLRD+ + NG L + + + + + T
Sbjct: 449 ADVQLRDLDKFWDANGRFLLDDPKDITIVQGDGTKAKITLYSTDTLRDVQTKMNNAIAFD 508
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ + V V ++ + +
Sbjct: 509 LGQAKYLTANTDKFVTFVGENEVVAGTSQSVQGTFVIRSAVAGKAGELNFSGDEDLIKAL 568
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
+ + A A ++ ++ VR +
Sbjct: 569 SLNVIRNSTENQFRVSVQDAHSGATVVSNAKVTGNVLYGIVHENVDVEFDNMANVRVSFL 628
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA 354
N+ + T + + ++D+ I +
Sbjct: 629 NNDFTLSQDTGKIYQTKLHLADNTTVFQIGANEKEDMGVNI-----GDMSARALGVHNIL 683
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ + ++ ID I + IG+ +R+ + + + + R+ D D
Sbjct: 684 VTDRDSAARSITVIDNAIDRVSKQRAAIGAYQNRLEHTINNLTVAGQNLTAAESRIRDLD 743
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + L Q L+ N +L L R
Sbjct: 744 MAKEMMNFTRLNILMQAGNSMLAQANQLPQNVLQLLR 780
>gi|312879816|ref|ZP_07739616.1| flagellin domain protein [Aminomonas paucivorans DSM 12260]
gi|310783107|gb|EFQ23505.1| flagellin domain protein [Aminomonas paucivorans DSM 12260]
Length = 775
Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N A+ A L N L+ +++S+GLR++ AAD+AA +I++ M++ L
Sbjct: 6 NIPALFAYNSLSSTNNALQKSINKLSTGLRINSAADDAAGLAISEKMRAQIRGLDQAVRN 65
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIA 123
G S + A+ +++ ++ ++ D + IQ E+ QL+ ++ IA
Sbjct: 66 SQDGISMIQTAEGALNETHSILQRMRELGVQAANDTLTSQDRRYIQDEVEQLKQEVDRIA 125
Query: 124 RGSSFNGENWLRTDLGSSTAS 144
+ FN + L + +S
Sbjct: 126 STTQFNKKKLLDGSAAALWSS 146
Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats.
Identities = 45/380 (11%), Positives = 102/380 (26%), Gaps = 7/380 (1%)
Query: 73 KVDIAKAGMSKAIDVMSTIKNK-ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
++ A + ++ V++ A G + ++ + QLRD+ + NG
Sbjct: 402 YLNTANGTLYESDLVLTLGTAFGAAAAPGLGHFQAAYVGQVAKGDVQLRDLDKFWDANGR 461
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
L + I + + + T + G +
Sbjct: 462 FLLEDAQQIVLTQGDGNQIKVTLNSTDTLRDVETKFNDAIAFGLGQAKYLSGNTDRFVDF 521
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
+ P+ ++ V +G T F L
Sbjct: 522 VENATTNSPESVEGTFVIRSVIAGKAGTLNFAGDEDVIKALSLNIIQNSSESQYRVTVQD 581
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + T V + +++ V + TN+ +
Sbjct: 582 AHSGNTIASNVKVTGNMLYGVVHPNVDMEFDAMANVAVAWSDSAKSFRLTRDTNNYETIL 641
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ + + G + ++ ++ + ++ ID
Sbjct: 642 HLADNTTVFQIGANEKEDMGANIGNMGARALGVHSVLM------TDRESAARSITIIDNA 695
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I + +G+ +R+ + + + + R+ D DMA E + L Q
Sbjct: 696 IDRVSTQRSSLGAYQNRLEHTINNLTVAGQNLTAAESRIRDLDMAKEMMNFTRLNILMQA 755
Query: 432 AVQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 756 GNSMLAQANQLPQAVLSLLR 775
>gi|294339852|emb|CAZ88215.1| putative flagellin (fla or fliC) [Thiomonas sp. 3As]
Length = 512
Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats.
Identities = 69/505 (13%), Positives = 149/505 (29%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++ L + +L ++S+G +++ ADN A ++I+Q ++ L+
Sbjct: 7 INTNVNALNTLNALGGTSSSLSTYIQQLSTGKQINGPADNPAGYAISQRFQTQINGLNQA 66
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S V A + +++ I+ +D +S+Q ++QL +Q+
Sbjct: 67 VSNGNQAVSLVQTATGALQNETNLLQQIRTIAVQSANGSNTASDRQSLQGVVSQLLAQVS 126
Query: 121 DIAR----------GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL 170
IA SF+G+ + + +++ + N T +
Sbjct: 127 TIATQTQFNGQNILDGSFSGQQFQVGANANQVINVSIANSQGNSIGLNTVGSGGTAKLFD 186
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
L ++ G + + V + T + +
Sbjct: 187 GATNGDLTNNGYGVAYTIGATTGAYLANTNGIAISGSVGSATTAATNPADSASIIASDIN 246
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVR 290
+ + A A + + T+ + SV A+ + +
Sbjct: 247 KISSQTGVTATASTAAVFKATDGSYTFSLQTSGVGGAGTTVSVTANVANGDLSGLTSAIN 306
Query: 291 ATTKNS---------------------------------------------ITSDPGYTN 305
TT + ++
Sbjct: 307 NTTAQTGISASVDSNGNLKLSQGSGDNISITGFSGTGTLQAVNAKGVALAASNANALLAA 366
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ T S L + ++ A+ + +
Sbjct: 367 AGTPGSATTALIQGAVQVQSTSGFSLDATAAGNIGLAAVSGLTSASNVNVSTVEGANAAL 426
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ ID+ I G +G+I +RI + ++ + DA++A +T+LS
Sbjct: 427 AVIDSAINALNQQGGALGAIQNRIQASVQNSQTTATNLQAAQSVVQDANIAQATTQLSKY 486
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q QQ + L+ N+ L L
Sbjct: 487 QILQQAGISTLAQANSLQQSYLKLL 511
>gi|227876878|ref|ZP_03994984.1| flagellin domain protein [Mobiluncus mulieris ATCC 35243]
gi|227842536|gb|EEJ52739.1| flagellin domain protein [Mobiluncus mulieris ATCC 35243]
Length = 554
Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 47/120 (39%)
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ + N+ + + +++++ +D +I+ + A +G++ +R
Sbjct: 435 GADGKKIDKRADYTVVNPFNSLTVKDHDSAQKLINVLDEKIRSVSTARSNLGAVQNRFEH 494
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + + R+ D DMA E + + Q Q L+ N +LSL R
Sbjct: 495 TITNLNVAVENLAASESRVRDTDMAQEMMQFTRNQILSQAGTSMLAQANQVPQGVLSLLR 554
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Query: 24 LEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSK 83
L +++SSG R++ AAD+AA +I++ ++S G G S V A+ +++
Sbjct: 39 LAKSLEKLSSGFRINRAADDAAGLAISEGLRSQVGGNRQAVRNAQDGISLVQTAEGALNE 98
Query: 84 AIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
++ ++ +I +E+ QL+ +L I + ++FNG L
Sbjct: 99 VHSILQRMRVLAVQGATDSNSPDARANINTELNQLRDELERIGKVTNFNGTTLLDGSAS 157
>gi|224419151|ref|ZP_03657157.1| flagellin A [Helicobacter canadensis MIT 98-5491]
gi|253828085|ref|ZP_04870970.1| flagellin [Helicobacter canadensis MIT 98-5491]
gi|313142658|ref|ZP_07804851.1| flagellin [Helicobacter canadensis MIT 98-5491]
gi|253511491|gb|EES90150.1| flagellin [Helicobacter canadensis MIT 98-5491]
gi|313131689|gb|EFR49306.1| flagellin [Helicobacter canadensis MIT 98-5491]
Length = 498
Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats.
Identities = 76/494 (15%), Positives = 142/494 (28%), Gaps = 46/494 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +A++A+ + +L ++SSGLR++ A D+A+ +IA ++S L
Sbjct: 5 VNTNVNALNATAQSTFTQNSLSSSLQKLSSGLRINSAKDDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + IA M + + ++ TIK K T + T +IQ++I +L L
Sbjct: 65 IRNANDGMGIIQIADKAMDEQVKILDTIKTKATQAAQDGQTSTTRTAIQADINRLIESLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP-------- 172
+IA+ +S+NG + L + + S +
Sbjct: 125 NIAQTTSYNGLSLLSGSFTNKEFQVGAFSNQSIRASIGATSSDKIGHVRSETLKFSALGT 184
Query: 173 -----------------------------------ETVLLDSSTDGTERYGLLDRNHKIK 197
++ ++ +
Sbjct: 185 TSLNFVQAQGTNDVTLESVVISTSAGTGLGALAEVINKNSNALGGVRAEATVIRTGTQSV 244
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
V + A T QA + L +
Sbjct: 245 AAGDVTSLTINGIKIGDIAGIQANDSDGRLVQAINAYKEQTGVQASTDEAGRLVLTSNDG 304
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+G S + +A + G + VAK T
Sbjct: 305 RAIQVAGGGMSAGGAAIITAANATSTFVGSLTLTRVGANDIKISGTGLTNVAKTSGTAQT 364
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
T + K + T ++ ++ IK +
Sbjct: 365 TTTLRNIKGNLSADVKSAIGANAGAWSGATGQGLEAGVITLKGAMLVMDIAESAIKQLDS 424
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+GS+ ++ + I + + V+ + + D ASES S L Q A+S
Sbjct: 425 IRSDLGSVQQQMQSTVNNITITQVNVKSAESGIREVDFASESANYSNLNILAQAGSYAMS 484
Query: 438 IVNNSTARILSLFR 451
N IL L +
Sbjct: 485 QANTVQQNILRLLQ 498
>gi|291276812|ref|YP_003516584.1| putative flagellin, FlaA [Helicobacter mustelae 12198]
gi|290964006|emb|CBG39845.1| putative flagellin, FlaA [Helicobacter mustelae 12198]
Length = 518
Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats.
Identities = 65/513 (12%), Positives = 149/513 (29%), Gaps = 66/513 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +A++ L+ +++SSGLR++ AAD+A+ +I+ ++S AL
Sbjct: 5 VNTNINALTTHTSAVATQLGLKNSLEKLSSGLRINKAADDASGMTISDSLRSQASALGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
G + +A M + + ++ TIK K T + G K+IQS+I +L L
Sbjct: 65 ISNANDGIGIIQVADKAMDEQLKILDTIKVKATQAAQDGQSLESRKAIQSDIIRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +S+NG++ L + I S ++ ++ +S
Sbjct: 125 NIGNTTSYNGQSLLSGQWTNKEFQIGAYSNQSIKVSVGSTTSDKIGQVRINTGAMITAAS 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + ++ + + + I+ K + A ++ +
Sbjct: 185 EATLTFKQINGGENITLEGVKISHSVGTGLGVLAEVINKNSDKTGIRAKASVETTSDKEI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTS-----GSKSPSVAASATYIRMGNSDIWVRATTKN 295
+ + + + + G + + + +++ + +
Sbjct: 245 MSGNLKNLTINDVNIGNIVDIKKGDADGRLVQAINALTSSTGVEASTDSKGRLNLRSVDG 304
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
+ + +D + S+ L+ T +
Sbjct: 305 RGIVLKADASKDDGDGKSAPMAIDAVNGGQSITDGEGAANYGRLSLARLDARDIILTSSD 364
Query: 356 NEKLAMEEMVSFIDT--QIKCAT----------AAAGKIGSISSRI-------------- 389
+ F D + + G+ + +
Sbjct: 365 KPDENKFSAIGFGDNNVAMATVNLRDVLGKFDASVKSAAGANYNAVVASGNSNLGAGVTT 424
Query: 390 -----------HLQEDFIKL---------------------MRDAVEKGVGRLVDADMAS 417
+ + + V+ R+ + D A+
Sbjct: 425 LVGAMLVMDIAESAQKTLDKIRSDLGSVQGQMVSTVNNISVTQVNVKAAESRIREVDFAA 484
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
ES + Q A+S N IL L
Sbjct: 485 ESAEFNKYNILAQSGSYAMSQANAVQQNILRLL 517
>gi|188586840|ref|YP_001918385.1| flagellin domain protein [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351527|gb|ACB85797.1| flagellin domain protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 383
Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 3/178 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A + L N N++ +R+SSG R++ AAD+AA SI++ M+ L
Sbjct: 3 INTNIEALNAHRNLEQTNQNMQKNLERLSSGQRINRAADDAAGLSISEKMRGQVSGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + A+ + ++ ++ ++ D IQ EI QL +L
Sbjct: 63 VRNAQDSISLIQTAEGALEESHSILQRMRELAVQSANDTNIDADRGEIQEEIDQLAEELH 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
I + FN +N + D + A + DN + D
Sbjct: 123 RIEETTEFNTQNLVDGDFAGTFHIGANEGQNLQLNIDNMGASELGVGEEYTATNDEAD 180
Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats.
Identities = 27/257 (10%), Positives = 74/257 (28%)
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ Q L D D + G + +L + + A +
Sbjct: 127 TTEFNTQNLVDGDFAGTFHIGANEGQNLQLNIDNMGASELGVGEEYTATNDEADLDEIAV 186
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
A + + ++ + + + + A +
Sbjct: 187 ADGETYEVVELDETLDGVFDGNGDAHYGLVNNEGEYVALADDEAQEFEFLDDAEADLDEI 246
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
++ + + + +E+ + +E ++ ID I
Sbjct: 247 GSDEVSDESVDFGNTVDRGSVTIEENDEGEIEATARMGIEVDEQESADEAITDIDNAIDT 306
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
++ ++G++ +R+ + + + + + R+ D DMA E S Q ++
Sbjct: 307 VSSQRSELGALQNRLEHTINNLSVASENLSAAESRIRDVDMAEEMMDFSTQQVLEEAGTA 366
Query: 435 ALSIVNNSTARILSLFR 451
++ N +L L +
Sbjct: 367 MMAQANMQPQSVLQLLQ 383
>gi|260774946|ref|ZP_05883847.1| flagellin protein FlaC [Vibrio coralliilyticus ATCC BAA-450]
gi|260609201|gb|EEX35359.1| flagellin protein FlaC [Vibrio coralliilyticus ATCC BAA-450]
Length = 379
Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats.
Identities = 41/230 (17%), Positives = 82/230 (35%), Gaps = 4/230 (1%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
MT ++ TN SAM+A + L +L +R+SSG +++ A D+AA I+ + + +
Sbjct: 1 MTITVNTNVSAMTAQRYLNKATGDLNTSMERLSSGQKINSAKDDAAGLQISNRLTAQSRG 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQ 116
L G S A+ M+++ ++ I++ ++ +++ E+ LQ
Sbjct: 61 LDVAMRNANDGISIAQTAEGAMNESTSILQRIRDLSLQSANGTNSASERQALNEEVEALQ 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+L IA +SF G L G ++ I S + I
Sbjct: 121 DELNRIAETTSFGGRKLLNGSFGEASFQIGASSGEAIIMGLTSIRADDFRMGGQSFIAEQ 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ G + + + + ++ T
Sbjct: 181 PKNKDWGVPPTAKDLKFEFTTKDGEAITLDIIAKDGDDIEELATYINGQT 230
Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/365 (9%), Positives = 83/365 (22%), Gaps = 2/365 (0%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQL--RDIARGSSFNGENWLRTDLGSSTASIA 146
NK T + + S +I + I+ + ++
Sbjct: 15 QRYLNKATGDLNTSMERLSSGQKINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISI 74
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + +Q S ++ ++
Sbjct: 75 AQTAEGAMNESTSILQRIRDLSLQSANGTNSASERQALNEEVEALQDELNRIAETTSFGG 134
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ + G S + + + + D G + P +
Sbjct: 135 RKLLNGSFGEASFQIGASSGEAIIMGLTSIRADDFRMGGQSFIAEQPKNKDWGVPPTAKD 194
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + + E
Sbjct: 195 LKFEFTTKDGEAITLDIIAKDGDDIEELATYINGQTDKLKASVDEEGKLQIFAAEPNLEG 254
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + N + V +D ++ + +G+
Sbjct: 255 NLNISGGLASELGLNGGPGLNTTVQNIDVNTVGGAQNAVGIVDAALRYVDSQRADLGAKQ 314
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R+ + + +++ VE R+ D D A E+T ++ Q QQ L+
Sbjct: 315 NRLSHSINNLANIQENVEASNSRIRDTDFAKETTAMTKAQILQQAGTSILAQAKQLPNSA 374
Query: 447 LSLFR 451
+SL +
Sbjct: 375 MSLLQ 379
>gi|317051415|ref|YP_004112531.1| flagellin domain-containing protein [Desulfurispirillum indicum S5]
gi|316946499|gb|ADU65975.1| flagellin domain protein [Desulfurispirillum indicum S5]
Length = 833
Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats.
Identities = 52/373 (13%), Positives = 119/373 (31%), Gaps = 3/373 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N +++A LR + NL +R+SSGLR++ A+D+A+ +I++ M+ L
Sbjct: 4 VIYNNIPSINAQNNLRVNSQNLSQSIERLSSGLRINRASDDASGLAISEKMRGQIRGLDR 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
G S + A+ +++ ++ ++ D + IQ E+ QL+S++
Sbjct: 64 AVANAQDGISLIQTAEGALNETTAILQRMRELSVQAANGTLTSDDRQHIQREVDQLKSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FN + L D + ++ ++ + IRD + +L S
Sbjct: 124 DRISTSTEFNTKKLLNGDATARWSTSDSDLMEAIIRDQVITGNYKIDVTAKVGKNQVLKS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + V + + + A +
Sbjct: 184 NIMTLREGAFAGDVLTLAGVAVTASVNSSGVAGVYAAEGVRTGDITDRTYLVNVATTSLA 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + S S + N + T + +
Sbjct: 244 GASFNGDSTLTLASISSGSMAINGTYQQAGSNWSVLSNGSGELENHNGMNVFATHGGVVT 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
++ T + + + T+NI +A + ++
Sbjct: 304 GYHGYMEIEFLQDAHLTTGGSDVTGAARVRFISVTTGEAEAWATVNIVDNALSLGGLDQF 363
Query: 360 AMEEMVSFIDTQI 372
+ F D +
Sbjct: 364 DGGAQLLFNDGAM 376
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 50/131 (38%)
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
+++ + + + + +E ++ ID I +
Sbjct: 703 DNSMSFQIGANAGQTMQSNIAQIDTKSLGIDRVLVVSQSLAQEAITDIDKAIGMVSTERA 762
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
K+G++S+R+ + + + + ++ R+ D ++A E ++ + Q Q A L+ N
Sbjct: 763 KMGAVSNRLDHTINSLSVAYENLQAAESRIRDVNVAKEMSQFTLNQMLTQAAQSMLAQAN 822
Query: 441 NSTARILSLFR 451
++ L R
Sbjct: 823 ALPQGVMQLLR 833
>gi|294829184|gb|ADF43019.1| flagellin-CtxB fusion protein [synthetic construct]
Length = 290
Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 78/184 (42%), Gaps = 3/184 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + + +L R+S+G R++ A D+AA IA + S L+
Sbjct: 3 LTVNTNIASLNTQRNLNNSSASLNTSLQRLSTGSRINSAKDDAAGLQIANRLTSQVNGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S A+ + ++ +++ +++ ++ ++ E+ QLQ +
Sbjct: 63 VATKNANDGISLAQTAEGALQQSTNILQRMRDLSLQSANGSNSDSERTALNGEVKQLQKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I+ ++F G L G ++ + + G + + + + +L
Sbjct: 123 LDRISNTTTFGGRKLLDGSFGVASFQVGSAANEIISVGIGGGKLMIKLKFGVFFTVLLSS 182
Query: 179 SSTD 182
+
Sbjct: 183 AYAH 186
>gi|304398755|ref|ZP_07380626.1| flagellin domain protein [Pantoea sp. aB]
gi|304353702|gb|EFM18078.1| flagellin domain protein [Pantoea sp. aB]
Length = 449
Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats.
Identities = 59/447 (13%), Positives = 125/447 (27%), Gaps = 31/447 (6%)
Query: 35 LRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK 94
+R++ A D+AA +IA M ++ A + V+ + S A G+ +D++ +
Sbjct: 1 MRINSAKDDAAGQAIANRMTANINADAVVARGLNDAISYSQTASGGLGSIVDLLIQARTL 60
Query: 95 ITAGVERG---TDSKSIQSEITQLQSQLRDIA-RGSSFNGENWLRTDLGSSTASIAK--- 147
D +S+ Q+ + + DIA F + A +
Sbjct: 61 SVQAANGTLSDADRQSVNGAYQQILAGINDIADHTEIFGRYPLATNNPDLPPAKLGNVDP 120
Query: 148 -----SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
V G +G + + I ++ +DS + + P
Sbjct: 121 INTKFPVPGKNYSFTSGVIPLAYIPAGSTAISITIDSLGMDDDLQLFTRDGKHLVGTPLD 180
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
D + T + TS + A L + ++
Sbjct: 181 GSAPDYTWASKGITNAATADTRLLTSKNGFGSGAAYDSSQLLEGGTSWALAGSNSSTYNG 240
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ S N I + ++ + V G+ +
Sbjct: 241 MNITYSGDGDRYEDVASGDFNNGTITSNRLERITLDTVNEDLIVVVVGNGSFTGNLTWGK 300
Query: 323 TT-------------------LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ P + D+ + + T N +
Sbjct: 301 LPEPKGVPETPPHESRPLEVVTSADYGQPVQSDTIPATPSDTKTLGLNNTTLLNSQDISS 360
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ ++ + + G+ +R + + R+ DAD A E+++L+
Sbjct: 361 TMKALERALAKISGYQSTYGAKINRYESNRNVLAQQGVDTSAARSRIQDADYAEEASQLA 420
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLF 450
Q QQ + N + I+ L
Sbjct: 421 RNQIIQQGQTAVSKMANKTPEMIIQLL 447
>gi|86146832|ref|ZP_01065151.1| flagellin [Vibrio sp. MED222]
gi|85835284|gb|EAQ53423.1| flagellin [Vibrio sp. MED222]
Length = 388
Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats.
Identities = 58/451 (12%), Positives = 123/451 (27%), Gaps = 70/451 (15%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNSANSAQQTSMERLSSGSKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ D +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETSNILQRMRDLSLQSTNGSNTKSDRVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + +
Sbjct: 124 NRIAETTSFGGNKLLNGTHGTKSFQIGADNGEAVMLQLKDMRSDNDQMGGS--------- 174
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
Y + A + + ++
Sbjct: 175 ------------------------------SYQFTEAKGKDWGVKAGANDLTMSLKDSFG 204
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
DQ + + A K+ I GN+ + +++
Sbjct: 205 DQREINISAKAGDDIEELATYINGQQDLVKASIDEEGKLQIFAGNNKVDGEIAFSGALSD 264
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ G + T T+D + L ++ +
Sbjct: 265 ELGMQAGAKPEDPKTLEGKQVTVDTIDVTSVGGAQESVAVIDAALKYVDSHRSELGAFQN 324
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D + A+ + ++ ++
Sbjct: 325 RFDHAINNLDNINENVNASKS-----------RIKDTDFAKETTNMTKSQI--------- 364
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLF 450
Q + L+ + LSL
Sbjct: 365 --------LSQASSSILAQAKQAPNSALSLL 387
>gi|150020412|ref|YP_001305766.1| flagellin domain-containing protein [Thermosipho melanesiensis
BI429]
gi|149792933|gb|ABR30381.1| flagellin domain protein [Thermosipho melanesiensis BI429]
Length = 386
Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats.
Identities = 51/359 (14%), Positives = 106/359 (29%), Gaps = 3/359 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + + N ++ +R+SSGLR++ A D+AA +I++ M+ ++
Sbjct: 3 INHNISALNAWRSIGQTNMSMSKTLERLSSGLRINRAGDDAAGLAISEKMRGQIKGINMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ D IQ+E+ QL+ ++
Sbjct: 63 IKNSQDAISLIQTAEGALTEVHSILQRMRELAVQASSDTNTDVDRNQIQAELDQLREEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IAR + FN + L L S ++ V+ N T + E ++
Sbjct: 123 RIARTTEFNTKKLLDGKLESFRSTEDIKVVTGGNIAINASAAGTVTEGTYIVEVGQFNTD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + L V + +T G L +
Sbjct: 183 TTLEVKVTLFTAGGSNSVTTTYTNGEATIGGVSITWDTTVFDVNFADFGGALPSGEVVDS 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ I + G + ++ S
Sbjct: 243 AVARVEAINTAANQLIFQIGSNEGHNMLTGIDDMSAGALGITTTSLDVTTQDAAERAIMV 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
V+ V S + E + + + ++
Sbjct: 303 VDAAIHKVSSQRAALGAVQNRLEHTISNLGVAAENLTAAESRVRDADMAKEMMEFTKQQ 361
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 44/352 (12%), Positives = 98/352 (27%), Gaps = 2/352 (0%)
Query: 100 ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
R D + + +++ Q++ I + + + S++
Sbjct: 37 NRAGDDAAGLAISEKMRGQIKGINMAIKNSQDAISLIQTAEGALTEVHSILQRMRELAVQ 96
Query: 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
T D + LD + +R + K+ L+ + T
Sbjct: 97 ASSDTNTDVDRNQIQAELDQLREEIDRIARTTEFNTKKLLDGKLESFRSTEDIKVVTGGN 156
Query: 220 KKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ Q T+ V + A + + T+ + + +
Sbjct: 157 IAINASAAGTVTEGTYIVEVGQFNTDTTLEVKVTLFTAGGSNSVTTTYTNGEATIGGVSI 216
Query: 280 IRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGY 339
A ++ S ++ +
Sbjct: 217 TWDTTVFDVNFADFGGALPSGEVVDSAVARVEAINTAANQLIFQIGSNEGHNMLTGIDDM 276
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
S L IT + + A E + +D I ++ +G++ +R+ + +
Sbjct: 277 SAGALGITTTS--LDVTTQDAAERAIMVVDAAIHKVSSQRAALGAVQNRLEHTISNLGVA 334
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R+ DADMA E + Q Q ++ L+ N +L L R
Sbjct: 335 AENLTAAESRVRDADMAKEMMEFTKQQILLQSSMGMLAQANAQPQNVLQLLR 386
>gi|209695754|ref|YP_002263684.1| flagellin [Aliivibrio salmonicida LFI1238]
gi|208009707|emb|CAQ80011.1| flagellin subunit A [Aliivibrio salmonicida LFI1238]
Length = 379
Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 72/184 (39%), Gaps = 3/184 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +AM+A + L + +L +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVAAMTAQRYLNNATNDLNNSMERLSSGTKINSAKDDAAGLQISNRLTAQTRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M+++ +++ +++ D SIQ E+ L +L
Sbjct: 64 AMRNANDGISIAQTAEGAMNESTNILQRMRDLSLQAANGSNSNQDRSSIQEEVHALSDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G S I + + + + +
Sbjct: 124 NRIAETTSFGGRRLLNGQFGESAFQIGANSGEAILIKLPSVRSDDDSMGGQRFVSENGKT 183
Query: 180 STDG 183
+
Sbjct: 184 AEWN 187
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 30/365 (8%), Positives = 82/365 (22%), Gaps = 2/365 (0%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQL--RDIARGSSFNGENWLRTDLGSSTASIA 146
N T + + S ++I + I+ + ++
Sbjct: 15 QRYLNNATNDLNNSMERLSSGTKINSAKDDAAGLQISNRLTAQTRGLDVAMRNANDGISI 74
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + +Q + + + ++
Sbjct: 75 AQTAEGAMNESTNILQRMRDLSLQAANGSNSNQDRSSIQEEVHALSDELNRIAETTSFGG 134
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ G + + + + + + D + G T
Sbjct: 135 RRLLNGQFGESAFQIGANSGEAILIKLPSVRSDDDSMGGQRFVSENGKTAEWNVETGKND 194
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ N+ + + S E +
Sbjct: 195 LKLEFTTKKGEAVSININAKAGDDIEELATYINGQSDKISASVGDEGKLQLFVAEPSIEG 254
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + + + ID+ + +G+
Sbjct: 255 ELAVSGNLASELGLAGGVGTKATVDKLDVTSVGDAQVSIGVIDSALAYIDRERADLGAKQ 314
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R+ + + +++ V R+ D D A E+T ++ Q QQ + L+
Sbjct: 315 NRLGHSINNLSNIQENVSASNSRIKDTDFAKETTNMTKAQILQQSSTSILAQAKQLPNAA 374
Query: 447 LSLFR 451
L L +
Sbjct: 375 LKLLQ 379
>gi|312882651|ref|ZP_07742388.1| flagellin [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369612|gb|EFP97127.1| flagellin [Vibrio caribbenthicus ATCC BAA-2122]
Length = 381
Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 72/189 (38%), Gaps = 4/189 (2%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
MT ++ TN SA++A + L L +R+SSG R++ A D+AA I+ + + +
Sbjct: 1 MTINVNTNVSALTAQRYLNKSTDELTTSMERLSSGQRINSAKDDAAGLQISNRLTAQSRG 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQ 116
L G S A+ M+++ ++ I++ + ++ E+ LQ
Sbjct: 61 LDVAMRNANDGISISQTAEGAMNESTQLLQRIRDLALQSANGTNSLSERVALNEEVMALQ 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+L IA +SF G L G + I S + +
Sbjct: 121 DELNRIAETTSFGGRRLLNGQFGEAAFQIGASSGEAILMTLTSVRADEPRMGGQLFIADP 180
Query: 177 LDSSTDGTE 185
L++
Sbjct: 181 LNAKDMNWS 189
Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 40/104 (38%)
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
+ V+ +D +K + +G+ +R+ + +++ V+
Sbjct: 277 TTPQNIDVTTAGGAQRGVAIVDAALKYVDSQRADLGAKQNRLSHSISNLANIQENVQASN 336
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D D A E+T ++ Q QQ L+ + ++L +
Sbjct: 337 SRIRDTDFAKETTAMTKAQILQQAGTSILAQAKQLPSSAITLLQ 380
>gi|254785445|ref|YP_003072874.1| A-type flagellin [Teredinibacter turnerae T7901]
gi|237686232|gb|ACR13496.1| A-type flagellin [Teredinibacter turnerae T7901]
Length = 591
Score = 137 bits (343), Expect = 4e-30, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 76/183 (41%), Gaps = 3/183 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ +N +++A ++L L+ +R++SG R++ AAD+AA +I+ S L
Sbjct: 3 LVVNSNIPSLNAQRQLLQSGAALDKASERLASGKRINSAADDAAGLAISNRQTSQIRGLD 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G S + A+ + + +++ ++ D ++ +E+ QL+++
Sbjct: 63 QAVRNANDGISLIQTAEGALDETTNILQRMRELAIQSSNGIYSDDDRTTLDAEVQQLKAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA +SFNG+N L LG + + + G D +
Sbjct: 123 IDRIADTTSFNGQNILDGSLGDVNLQVGSESNQTISFNIRGFNSSNLGGAGGDVIGAAVG 182
Query: 179 SST 181
S T
Sbjct: 183 SGT 185
Score = 116 bits (289), Expect = 9e-24, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 45/97 (46%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + ID+ ++ +G+I++R+ + + + R++DAD
Sbjct: 495 ISTAANAQRAIDVIDSALEQINDTRSDLGAINNRLDFTVSNLANISEKTAASRSRIMDAD 554
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ASE+ +LS Q QQ + L+ N ++LSL +
Sbjct: 555 FASETAQLSRAQVLQQASQAMLAQANARPQQVLSLLQ 591
>gi|59712473|ref|YP_205249.1| flagellin [Vibrio fischeri ES114]
gi|197335711|ref|YP_002156692.1| A-type flagellin [Vibrio fischeri MJ11]
gi|46394804|gb|AAS91569.1| flagellin subunit A [Vibrio fischeri ES114]
gi|59480574|gb|AAW86361.1| Flagellin FlaA [Vibrio fischeri ES114]
gi|197317201|gb|ACH66648.1| A-type flagellin [Vibrio fischeri MJ11]
Length = 379
Score = 137 bits (343), Expect = 4e-30, Method: Composition-based stats.
Identities = 39/184 (21%), Positives = 73/184 (39%), Gaps = 3/184 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +L +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNATNDLNNSMERLSSGTKINSAKDDAAGLQISNRLTAQTRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M+++ +++ +++ D SIQ E+ L +L
Sbjct: 64 AMRNANDGISIAQTAEGAMNESTNILQRMRDLSLQAANGSNSDQDRASIQEEVHALSDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G S I + + + + S
Sbjct: 124 NRIAETTSFGGRRLLNGQFGESAFQIGANAGEAILIKLPSVRADDDSMGGQRFVSENGKS 183
Query: 180 STDG 183
++
Sbjct: 184 ASWN 187
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 31/365 (8%), Positives = 83/365 (22%), Gaps = 2/365 (0%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQL--RDIARGSSFNGENWLRTDLGSSTASIA 146
N T + + S ++I + I+ + ++
Sbjct: 15 QRYLNNATNDLNNSMERLSSGTKINSAKDDAAGLQISNRLTAQTRGLDVAMRNANDGISI 74
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + +Q D + + ++
Sbjct: 75 AQTAEGAMNESTNILQRMRDLSLQAANGSNSDQDRASIQEEVHALSDELNRIAETTSFGG 134
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ G + + A + + D + G + +
Sbjct: 135 RRLLNGQFGESAFQIGANAGEAILIKLPSVRADDDSMGGQRFVSENGKSASWNVEPGKND 194
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ ++ + + S E +
Sbjct: 195 MKLEFTTKKGEAVSIDISAKAGDDIEELATYINGQSDKISASVGDEGKLQLFVAEPSIEG 254
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
L + + + ID+ + +G+
Sbjct: 255 ELSITGNLATELGLESGLGSKATVDKLDVTSVGDAQVSIGVIDSALAYIDRERADLGAKQ 314
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R+ + + +++ V R+ D D A E+T ++ Q QQ + L+
Sbjct: 315 NRLGHSINNLSNIQENVSASNSRIKDTDFAKETTNMTKAQILQQSSTSILAQAKQLPNAA 374
Query: 447 LSLFR 451
L+L +
Sbjct: 375 LTLLQ 379
>gi|291286439|ref|YP_003503255.1| flagellin domain protein [Denitrovibrio acetiphilus DSM 12809]
gi|290883599|gb|ADD67299.1| flagellin domain protein [Denitrovibrio acetiphilus DSM 12809]
Length = 803
Score = 137 bits (343), Expect = 4e-30, Method: Composition-based stats.
Identities = 48/368 (13%), Positives = 106/368 (28%), Gaps = 3/368 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I N +A+SA + + + +R+SSGLR++ AAD+A+ +I++ ++ L
Sbjct: 4 TIYQNVAALSAQRNVGQSQNAMNKSIERLSSGLRINSAADDASGLAISEKLRGQIAGLQR 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
S G S + A+ + + ++S ++ D IQ E+ +L++++
Sbjct: 64 ASMNAQDGISMLQTAEGALGEVNTMLSRMRELAVQASNGTYTSNDRVEIQKEVEELKNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FN + L D + +S + + D ++ +
Sbjct: 124 DRISSSTEFNTKKLLNGDGTALWSSSSDQIEAIIRDDVEQGNYKIQLETIAGENQIFKTD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + I + + + T+ T
Sbjct: 184 IMTLRDDVIGSEIITAGNANETNIMSITDPESLNATGSAYYTVTVGDTTATSTADVGVTG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ V A ++ S + + + +
Sbjct: 244 FFQNPGSGFIVSAVGTGAGTLSSVPGYVEIEFSESVYSAAVGQTITANVRFINALTGEKG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
D G T A T+ D + + N
Sbjct: 304 DWGEVTMTDATGNGVFTAGTTDFGGTLKNTDGNVINFDISVGYYTGAVQSGDKVLVNVSP 363
Query: 360 AMEEMVSF 367
V
Sbjct: 364 MPAGAVGT 371
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 37/95 (38%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ ++ + ID I + IG+ +R+ + ++ + R+ D DMA
Sbjct: 709 SQDLAQKAIPDIDAAINQVVSIRATIGAQINRLDHTIVNLDTAKENMTASESRIRDLDMA 768
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E T + Q Q + L+ N LSL +
Sbjct: 769 EEMTTFTRYQVLSQAGISMLAQANQIPQMALSLLQ 803
>gi|50082711|gb|AAT70053.1| flagellin [Pectinatus frisingensis]
Length = 421
Score = 137 bits (343), Expect = 5e-30, Method: Composition-based stats.
Identities = 60/425 (14%), Positives = 134/425 (31%), Gaps = 4/425 (0%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+ + N NL +VSSG +++ AAD+ A ++I+Q M++ +L+ + G
Sbjct: 1 NTLNIMSKNNKNLAASLQKVSSGQKINSAADDPAGYAISQRMQTQIRSLNQDNTNAANGQ 60
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
+ + A+ ++ +D++ T+K K+ + + L + I ++
Sbjct: 61 NMLKTAEGTVASTVDILKTLKEKVLDAANDTNTTYDRNTIQDYLDQTVAQINDNANVTYN 120
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
+ L D + A +V S T + D L+ + T +
Sbjct: 121 SKLLVDGSMNQQGSATTVAYSNASLATDTTFFTALTALKDRNGNTLNILSQDTVTVSYVT 180
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
+ +V ++ + + S A +
Sbjct: 181 NGKVMTTSFKVGSSTLSDIFSKANQATGATITGMGNSVYLKTAGTGSTIGKNAQDVTMHT 240
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ T++ + S + + + GN V S +
Sbjct: 241 ADGSSVLTVTSNKSGISGNIAGFTISISGTDGNIKTSVNTKLDAWDEQISAQDKSNDNSI 300
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
++ + L + ++ + + V+ +D
Sbjct: 301 TLQVGTKANQTIRVG----LGDMRAQALGLQGVSADGSVQNLDVSTRANANAAVNVLDNA 356
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
++ A +IGS+ SR+ +D + V+ + DA+MA E T + Q
Sbjct: 357 VQKALKEQTQIGSVESRLDYTQDNLTTASQNVQASESTITDANMAQEMTEYTKNNILMQA 416
Query: 432 AVQAL 436
+ L
Sbjct: 417 SQAML 421
>gi|255022059|ref|ZP_05294065.1| Flagellin protein flaB [Acidithiobacillus caldus ATCC 51756]
gi|254968545|gb|EET26101.1| Flagellin protein flaB [Acidithiobacillus caldus ATCC 51756]
Length = 492
Score = 137 bits (343), Expect = 5e-30, Method: Composition-based stats.
Identities = 76/485 (15%), Positives = 152/485 (31%), Gaps = 37/485 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN SA+ A L + N + +Q+ +S+GL ++ ADN A ++IAQ + +
Sbjct: 7 SINTNVSALDALNSLGNTNQTINHLQNELSTGLAINSPADNPAGYTIAQGFTTQINGSNQ 66
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S + A + + ++ I+ D S+QS + L +Q+
Sbjct: 67 AISNANQAVSLLQTATGALGQQTSILQNIRTIAVQAANGTNTTADLGSLQSTVGNLVAQI 126
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I++ + FNG N L + + + Y P +
Sbjct: 127 TTISQQTQFNGINLLDGSFSGAQFQVGANQGQVITASIGSTAAENLGMYTTTPSGSVYGG 186
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
ST + + A S+ + + A
Sbjct: 187 STGAYGNGLAYVASTSGAFSSGTMTIYGSQGSGAVTVSSSGESAASVAQSVNQVANLTGV 246
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + +GTSGS + +V+ SA S + + N+ TS
Sbjct: 247 NAQAYTSVAFNVTSTGDISFSLGNGTSGSLNNAVSISADVTSSSASGMSSLVQSINASTS 306
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA--------- 350
G + S K V+ + ++++ DS +
Sbjct: 307 TTGISASVNTKNQLVLTDVNGNNISINNFSGSVSMTDSAGGLTLAAGATSGATIQGVVSF 366
Query: 351 -------------------------NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
N + + ++ + I+ ++G++
Sbjct: 367 QSASAFTVSGGSDVGVSSGSSLLNLNQVNVATQYGASQAITIVGYAIQQLNEQGTQLGAV 426
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445
R+ + + + DA++ ST+L+ Q QQ + AL+ + +
Sbjct: 427 QQRVESALSNEQTTNTNDQSAQSVIQDANIPQVSTQLTQAQVLQQAGIAALAASSQTQQA 486
Query: 446 ILSLF 450
L L
Sbjct: 487 YLKLL 491
>gi|149182554|ref|ZP_01861026.1| Flagellin-like protein [Bacillus sp. SG-1]
gi|148849746|gb|EDL63924.1| Flagellin-like protein [Bacillus sp. SG-1]
Length = 177
Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++ + L+ N L +++SSGL ++ A+D+AA +I++ M++ L
Sbjct: 8 IAHNIIALNINHSLKKNNKALGTSLEKLSSGLHINKASDDAAGLAISEGMRAQIRGLEQA 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
I G S + A+ + + D+ +K G D ++IQSE+ QL+ ++
Sbjct: 68 ERNIQDGISLIQTAEGALGEIHDITHRMKELSVQGANGTLSNLDKEAIQSELDQLKDEIG 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGS 152
I+ + +N + L +T +
Sbjct: 128 RISTSTQYNSKVLLDGSFEFTTDNKVARGFEW 159
>gi|212640407|ref|YP_002316927.1| flagellin protein FliA(H) [Anoxybacillus flavithermus WK1]
gi|212561887|gb|ACJ34942.1| Flagellin protein FliA(H) [Anoxybacillus flavithermus WK1]
Length = 618
Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats.
Identities = 50/342 (14%), Positives = 105/342 (30%), Gaps = 5/342 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++A + L N +++SSGLR++ AAD+AA +I++ M+S L
Sbjct: 16 INHNIQALNAYRNLAVNQSNTAKNLEKLSSGLRINRAADDAAGLAISEKMRSQIRGLQMA 75
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ +D +IQ+E+ QL ++
Sbjct: 76 ERNALDAISLIQTAEGALNEVHGILQRMRELAVQASNDTLEPSDRAAIQAEVDQLTKEID 135
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + A+ NG + P V+LD S
Sbjct: 136 RIADTTQFNQKLLFSGSPKGKAF--AEVNSSKISYAGNGTWEGIVTTTPTAPAQVVLDFS 193
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + A A +
Sbjct: 194 RAFGVLTDDEIDGQIFTINGKTYQIDAKGDGVTNTSHIRVDVSSWNPPSNDDGDAVANIN 253
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + +T + + + + ++ + + +
Sbjct: 254 SLMTALKNTIIANDSTFSSASTITNASDSGTANDGTISNGQLTLLTTKNMSPKEANQIQV 313
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
++T K T ST S E +
Sbjct: 314 SSSFDNTKLKYLPTSISTTEVSTFFASGTSATSESFTLSFND 355
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 50/372 (13%), Positives = 114/372 (30%), Gaps = 2/372 (0%)
Query: 80 GMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
++ +M+ +KN I A + + +I + + I+ G +
Sbjct: 248 AVANINSLMTALKNTIIANDSTFSSASTITNASDSGTANDGTISNGQLTLLTTKNMSPKE 307
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
++ ++ S + ++ + + + +S T + + +N I
Sbjct: 308 ANQIQVSSSFDNTKLKYLPTSIST--TEVSTFFASGTSATSESFTLSFNDVPKNGDILKI 365
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+ S + T+ SG + A A
Sbjct: 366 DNLKITFSDSTSNTYSWSGTEGTATINVSGKSVTDVLNEIKDVLDDAVADTTNRPVDALT 425
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + ++ + ++ +N + N + N +
Sbjct: 426 FHSVVDNMLLLSTNRTEDGGSFGFSNGLEIQLIDRNFGDKEGQKLNLEMQIGANESETLA 485
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + +D+ + VT + A D + +S ID I+ +
Sbjct: 486 FDLSVMDAASLGLARKADRTTAVTAGVNAEAGIDVSSSAQVARASISVIDEAIRKVSEER 545
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
GK+G+ +R+ + +K + + R+ D DMA E T + Q A L+
Sbjct: 546 GKLGAYQNRLEHTINNLKTAHENLTSSESRIRDTDMAMEMTNFTKNNILNQAAQAMLAQS 605
Query: 440 NNSTARILSLFR 451
N IL L +
Sbjct: 606 NQLPQGILQLLK 617
>gi|86146146|ref|ZP_01064472.1| flagellin [Vibrio sp. MED222]
gi|85836093|gb|EAQ54225.1| flagellin [Vibrio sp. MED222]
Length = 388
Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats.
Identities = 58/451 (12%), Positives = 126/451 (27%), Gaps = 70/451 (15%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNSANSAQQTSMERLSSGSKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ D +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETSNILQRMRDLSLQSTNGSNTKADRVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + +
Sbjct: 124 NRIAETTSFGGNKLLNGTHGTKSFQIGADNGEAVMLQLKDMRSDNDQMGG---------- 173
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + A + + ++
Sbjct: 174 -----------------------------NSYQFTEAKGKDWGVTAGANDLTMSLKDSFG 204
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
DQ + + A K+ I GN+ + +++
Sbjct: 205 DQREINISAKAGDDIEELATYINGQQDLVKASIDEEGKLQIFAGNNKVDGEIAFSGALSD 264
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ G T + T ++D + L ++ +
Sbjct: 265 ELGMTAGAKPEDPKTLEAKQVTVDSIDVTSVGGAQESVAVIDAALKYVDSHRSELGAFQN 324
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ +D + A+ + ++ + ++
Sbjct: 325 RFDHAINNLDNINENVNASKS-----------RIKDTDFAKETTQMTKSQI--------- 364
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLF 450
Q + L+ + LSL
Sbjct: 365 --------LSQASSSILAQAKQAPNSALSLL 387
>gi|90408068|ref|ZP_01216239.1| flagelline [Psychromonas sp. CNPT3]
gi|90310825|gb|EAS38939.1| flagelline [Psychromonas sp. CNPT3]
Length = 568
Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A ++L +R+SSGLR++ A D+AA +I+ M+S ++
Sbjct: 4 VINTNIMSLNAQRQLNKSQLLSNEAMERLSSGLRINSAKDDAAGLAISTGMQSQIRGINQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S A+ M + +++ ++ ++ +SIQ EI QL +L
Sbjct: 64 AVRNANDGISMSQTAEGSMDEMTNILQRMRELSVQAANDTNSASNKESIQKEIDQLYEEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKS 148
IA + FNG N L S+T I +
Sbjct: 124 DRIANTTQFNGTNLLDGSNKSTTLQIGAN 152
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 42/332 (12%), Positives = 91/332 (27%)
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++ G SF+G N G + + I + T +
Sbjct: 237 NVVEGQSFDGINVTGITNGLTIQVGDGANITLGATSSMENLAETINRDVKGVTANVGKDG 296
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
V L+ Y + ++ + + T
Sbjct: 297 RLILNNDTGFAITVGGNVTNSGLEAATFEGYMGLTSQDGGPIEVGVGTTGTIGDNTDTKK 356
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
I L AP A + + + + + + + T + +
Sbjct: 357 FGFMITNGSSVLTDAPGAGELLDADKITINGVELIDTSATTIDDKMVAINKLTDATGVTA 416
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + ++ + D + +
Sbjct: 417 TASIPAGSMILTAKDGSDIVIASGAATEADKIAALAKLGINDVGGSAVTELGLSVRTSKK 476
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
E + ID + + + +G+I +R+ ++ + + R+ DAD A+E+
Sbjct: 477 ASESLGRIDIALSKISESRAGLGAIQNRLGSTISNLENVSQNLSASNSRIQDADFAAETA 536
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
++S Q QQ L+ N ST +L L +G
Sbjct: 537 KMSKAQILQQAGTSMLAQANASTQSVLKLLQG 568
>gi|66768558|ref|YP_243320.1| flagellin [Xanthomonas campestris pv. campestris str. 8004]
gi|66573890|gb|AAY49300.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 401
Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats.
Identities = 52/451 (11%), Positives = 119/451 (26%), Gaps = 55/451 (12%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + ++ + ++SSG R++ A+ +AA +I++ + L
Sbjct: 4 VINTNVMSLNAQRNLNTNSSSMALSIQQLSSGKRITSASVDAAGLAISERFTTQIRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
S + + +A+ +++ G + S
Sbjct: 64 ASR---NANDGISLAQTAEGAMVEI----------GNNLQRIRELSVQSANATNSATDRE 110
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A S + + T+ ++ +V V + +
Sbjct: 111 ALNSEVKQLTSEIDRVANQTSFNGTKLLNGDFSGALFQVGADAGQTIGINSIVDANVDSL 170
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
G + + + K A ++
Sbjct: 171 GKANFAASVSGAGVTGAATASGSLSGITLAFKDASGAAKSVAVADIKIASGDTAADINKK 230
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
A A TSG +S T + G S T
Sbjct: 231 VASAINDKLDQTGMYASIDTSGNVKLESLKAGQDFTSLSGGTSGAAGITAGAGIQT---- 286
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
S + + ++ + +
Sbjct: 287 ------------------------------------ASAASGSTASTLSSLDISTFSGAQ 310
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ + +D + ++ +G++ +R + + + R+ D D A + L
Sbjct: 311 KALEIVDKALTSVNSSRADMGAVQNRFTSTIANLAATSENLTASRSRIADTDYAKTTAEL 370
Query: 423 --SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q QQ L+ + +LSL +
Sbjct: 371 TRTRTQILQQAGTAMLAQAKSVPQNVLSLLQ 401
>gi|149182555|ref|ZP_01861027.1| flagellar protein [Bacillus sp. SG-1]
gi|148849747|gb|EDL63925.1| flagellar protein [Bacillus sp. SG-1]
Length = 554
Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats.
Identities = 52/309 (16%), Positives = 104/309 (33%), Gaps = 3/309 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ +L++ N + V +R+SSG+R++ AAD+AA +I++ M++ L+
Sbjct: 3 INQNITALNTLNRLKENNKKVSVNLERLSSGMRINKAADDAAGLAISERMRAQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ I G S V + +++ D + ++ D + IQ+EI QL L
Sbjct: 63 QNNIQDGISLVQTTEGALAEIQDSLQRMRELSVQASNGTLTNGDRQGIQNEINQLNQGLN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
DI + FN + L SS S K+V + + + + + ++ S+
Sbjct: 123 DIVNKTEFNTKKLLTNYTESSFQSEWKTVKTTASGNFRDITTNGEMFVAVTTDGDIVSSA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
V + K G + +
Sbjct: 183 DGEVWEKETNLSRILTNVYWDGDRFFTTGEGQTVAYSGNGKDWKIGIDGGSHYFFDIAKN 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ +AT L + N + S + T+ ++
Sbjct: 243 RDVYMATGNAGLAYSNDGVNWSYTDPNLNQASEDLISNGQDFVWLQGSELKTSSKGVSWT 302
Query: 301 PGYTNSTVA 309
+
Sbjct: 303 THFDFYDTY 311
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/331 (9%), Positives = 74/331 (22%), Gaps = 14/331 (4%)
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
DIA+ S+ + + + +L + S
Sbjct: 238 DIAKNRDVYMATGNAGLAYSNDGVNWSYTDPNLNQASEDLISNGQDFVWLQGSELKTSSK 297
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + V + G T L L
Sbjct: 298 GVSWTTHFDFYDTYSAGEPDIAYNGEIYVVANRDGRTFTSPDLLNWKERQSLTENVMEVK 357
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ G S YI +S + ++
Sbjct: 358 WENNQFMAISQGEYGDNQSVVSISRDGVNWSSHMIEDPYINSVSSINKLYIAVGSN---- 413
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + L + ++ + +
Sbjct: 414 ----------GQVYKGELSEKPYQLTLQVGSNINHFKIDLPNASSLLEETSNISVLHADK 463
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
E + +D I+ ++ + G+ + + + + ++ R+ D DMA E
Sbjct: 464 ATEAIKLLDIAIRDISSERSRFGAYHNALEHIHNNVLNYEQSLVSAESRIRDVDMAKEIM 523
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q + ++ N + +L L R
Sbjct: 524 NQTKNVILAQASQSIITSANQQSQGVLQLLR 554
>gi|88858135|ref|ZP_01132777.1| flagellin [Pseudoalteromonas tunicata D2]
gi|88819752|gb|EAR29565.1| flagellin [Pseudoalteromonas tunicata D2]
Length = 587
Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 74/205 (36%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++ + L L R+SSGLR++ A D+AA I+ + S L+
Sbjct: 5 INTNVASINGQRNLNKSTEGLTTSMQRLSSGLRINSAKDDAAGMQISNKLTSQINGLNVA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ G S +A+ + ++ +++ +++ D S+Q E+ QLQ +L
Sbjct: 65 TRNANDGISMAQVAEGALQESTNILQRMRDLAIQAANGTYSDGDRASLQEEVVQLQRELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++F G + G+ + + + + +
Sbjct: 125 RIASTTTFGGRKLMDGSFGTEQFQVGSKSFETISVSVGSFFGEDMGAETYELKNQTAANE 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
G + + +
Sbjct: 185 AAGLQNNVVTSTAMTGLIAANSSTT 209
Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 50/418 (11%), Positives = 119/418 (28%), Gaps = 6/418 (1%)
Query: 35 LRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK 94
L+ AA+ AA + + L A + + L I + + S +NK
Sbjct: 176 LKNQTAANEAAGLQNNVVTSTAMTGLIAANSSTTLVGMGNFITTGSLGASQSTYSANRNK 235
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
++ T S ++ + + + + + + + + A++V+
Sbjct: 236 LSTIATTTTVSLGVKGSLGSASATITGLGGSAYDAERAIDQITSKTGAEADARTVVTLDF 295
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
G V L + K + V+ ++ +
Sbjct: 296 YGSVGTVAGGQDTALLTGDATFTLELRGENTDATKEGARIKFTISNTEELSGVVNAFNEA 355
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ L L + + + + + + G+ + +
Sbjct: 356 SGETGISASLTGDGRIKLVSERGDNIVFENMQVDYNGVGSRMTIQAASYDFDGNAADTTT 415
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
A AT G + + TV G+ + + +
Sbjct: 416 AIATGRIFGTATNGAGGVGNGDANASTTTFVGTVRMTGSDDFKLQDTTGAGSMLHGNTIG 475
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
++ + L ++ + ID + + +G++ +R+
Sbjct: 476 E------SAISGKETVDEINIGTALGAQKAIDVIDGALSYIDSQRANMGAVQNRLSSTIS 529
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
++ + + R+ D D A E+ +++ Q QQ L+ N LSL G
Sbjct: 530 NLENVVENASASRSRIRDTDFALETAQMTKNQILQQAGTSILAQANQLPQSALSLLGG 587
>gi|197335862|ref|YP_002156690.1| flagellin [Vibrio fischeri MJ11]
gi|197317352|gb|ACH66799.1| flagellin [Vibrio fischeri MJ11]
Length = 377
Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 76/206 (36%), Gaps = 4/206 (1%)
Query: 1 MTS-ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M+ + TN SAM+A + L +L +R+SSG R++ A D+AA I+ +KS
Sbjct: 1 MSVTVNTNVSAMTAQRYLNQATEHLNQSMERLSSGKRINSAKDDAAGLQISNRLKSQMSG 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQ 116
L G S A+ M+++ +++ +++ D ++IQ E L
Sbjct: 61 LDVAVRNANDGISIAQTAEGAMNESTNILQRMRDLALQSSNGSNTLQDRQAIQEEADALN 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+L IA +SF G L G+ST I + + T +
Sbjct: 121 DELNRIAETTSFGGRRLLNGQFGTSTFQIGANAGEAVQLTLGSMRSDTLAMGGFHYTSQN 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQV 202
+ G +
Sbjct: 181 QLNKGWTVPEGGQTLTMSFNDENGKA 206
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 32/362 (8%), Positives = 83/362 (22%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N+ T + + + S I + + + + +
Sbjct: 15 QRYLNQATEHLNQSMERLSSGKRINSAKDDAAGLQISNRLKSQMSGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + + ++ D D +
Sbjct: 75 AQTAEGAMNESTNILQRMRDLALQSSNGSNTLQDRQAIQEEADALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
++ A A + + T +
Sbjct: 135 RRLLNGQFGTSTFQIGANAGEAVQLTLGSMRSDTLAMGGFHYTSQNQLNKGWTVPEGGQT 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ S + + + T G ++ A V + + S
Sbjct: 195 LTMSFNDENGKAQEITIEAKAGDDIEELATYINGQNDTVQASVDEKGQLQLFTAGDVVSS 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
S + + N + ++ +D + +G+ +R
Sbjct: 255 AVTFGGTLSAELAIGGAVFDTVNDLDLTSVGGSQRAIATLDAAMGFVDKERATLGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+ + Q QQ++ L+ + L
Sbjct: 315 FDHAINNLNNINENVAASNSRIEDTDFAKETVEMMKAQILQQVSSTVLAQAKQAPDIALK 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|269960650|ref|ZP_06175022.1| flagellin FlaE [Vibrio harveyi 1DA3]
gi|269834727|gb|EEZ88814.1| flagellin FlaE [Vibrio harveyi 1DA3]
Length = 377
Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats.
Identities = 48/365 (13%), Positives = 100/365 (27%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +A+ A + L L +R+SSG R++ A D+AA I+ ++S L
Sbjct: 4 TVNTNVAALVAQRHLTSATDMLNQSMERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ ++M +++ + ++Q E++ L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSKAERTALQEEVSALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G S I + S + S
Sbjct: 124 NRIAETTSFGGRKLLNGSFGKSAFQIGAASGESVQVELKSMRSDGIDMGGFSYIANGRAS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + + T
Sbjct: 184 SDWKVKDGANDLSMSFTNRFGETETIQINAKAGDDIEELATYINGQTDKVTASVNEEGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + T + + V T + S
Sbjct: 244 QLFMAGEETSGTLSFSGDLASELGLQLKGYDAVDNIDITSVGGAQQAVAVLDTAMKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D L + ++ D + + + +
Sbjct: 304 HRAELGAYQNRFNHAINNLDNIHENLAASNSRIQDTDYAKETTQMVKQQILQQVSTSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 34/364 (9%), Positives = 91/364 (25%)
Query: 87 VMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
V T + + + S I + + + + +
Sbjct: 13 VAQRHLTSATDMLNQSMERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDVAVRNANDGI 72
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + + + + +S + T + +
Sbjct: 73 SIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSKAERTALQEEVSALNDELNRIAETTSF 132
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ A + + + + ++ +
Sbjct: 133 GGRKLLNGSFGKSAFQIGAASGESVQVELKSMRSDGIDMGGFSYIANGRASSDWKVKDGA 192
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
S S + + T G T+ A V +
Sbjct: 193 NDLSMSFTNRFGETETIQINAKAGDDIEELATYINGQTDKVTASVNEEGQLQLFMAGEET 252
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
S + + L + ++ V+ +DT +K + ++G+
Sbjct: 253 SGTLSFSGDLASELGLQLKGYDAVDNIDITSVGGAQQAVAVLDTAMKYVDSHRAELGAYQ 312
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + + + + + + R+ D D A E+T++ Q QQ++ L+ +
Sbjct: 313 NRFNHAINNLDNIHENLAASNSRIQDTDYAKETTQMVKQQILQQVSTSILAQAKQAPNLA 372
Query: 447 LSLF 450
L+L
Sbjct: 373 LTLL 376
>gi|260767761|ref|ZP_05876696.1| flagellin protein FlaC [Vibrio furnissii CIP 102972]
gi|260617270|gb|EEX42454.1| flagellin protein FlaC [Vibrio furnissii CIP 102972]
gi|315179407|gb|ADT86321.1| flagellin [Vibrio furnissii NCTC 11218]
Length = 379
Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats.
Identities = 43/289 (14%), Positives = 91/289 (31%), Gaps = 3/289 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + L +R+SSG R++ A D+AA I+ + + + L
Sbjct: 4 NVNTNVSAMTAQRYLNKASNELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M+++ ++ +++ ++ K++ E+T LQ +L
Sbjct: 64 AMRNANDGISIAQTAEGAMNESTSILQRMRDLSLQSANGTNSASERKALNEEVTALQDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G ++ I S + I + +
Sbjct: 124 NRIAETTSFGGRKLLNGSFGEASFQIGASSGEAIIMGLTSIRADDHRMGGMSFVSEQGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G + + + + + T +
Sbjct: 184 KNWGVPDNARDLKFEFTGKDGEPVTLNINAKTGDDIEELATYINGQTDIFKASVDQDGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
+ + + + + + +G S
Sbjct: 244 QIFIAQPELAEDFSISGGLASQLGLNTDNGQYTTVQDIDVNTVGGSQNA 292
Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/386 (11%), Positives = 99/386 (25%), Gaps = 10/386 (2%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++KA + ++T ++ + + + +
Sbjct: 4 NVNTNVSAM-TAQRYLNKASNELNTSMERL-----SSGNRINSAKDDAAGLQISNRLTAQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + ++ + +
Sbjct: 58 SRGLDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLSLQSANGTNSASERKALNEEVT 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ S +AS I + ++A + +
Sbjct: 118 ALQDELNRIAETTSFGGRKLLNGSFGEASFQIGASSGEAIIMGLTSIRADDHRMGGMSFV 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
+ + + DI AT N T +
Sbjct: 178 SEQGKDKNWGVPDNARDLKFEFTGKDGEPVTLNINAKTGDDIEELATYINGQTDIFKASV 237
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
K+ + + N + V
Sbjct: 238 DQDGKLQIFI----AQPELAEDFSISGGLASQLGLNTDNGQYTTVQDIDVNTVGGSQNAV 293
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID +K + +G+ +R+ + +++ VE R+ D D A E+T+L+
Sbjct: 294 GIIDAALKYVDSQRADLGAKQNRLSHSISNLANIQENVESSKSRIKDTDFAKETTQLTKS 353
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ L+ +SL +
Sbjct: 354 QILQQAGTSILAQAKQLPNSAISLLQ 379
>gi|301165532|emb|CBW25103.1| flagellin subunit [Bacteriovorax marinus SJ]
Length = 277
Score = 136 bits (341), Expect = 7e-30, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 69/179 (38%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S++SA + L N N+ ++SSG R++ AAD+AA +I++ +K+ +
Sbjct: 5 INTNVSSLSAQRTLSTTNRNMNDNLRKLSSGERITRAADDAAGLAISENLKAQIRGMRQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
S + A+ G+++ +++ ++ + K E L+ ++
Sbjct: 65 KRNANDAISLIQTAEGGLNEISNIIIRLRELSVQAANDTLGPEERKYSDIEFQNLKEEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+R S FNG L G + R L + S
Sbjct: 125 RISRSSEFNGVKLLDGTGGRMEFQVGIHNDPINDRLVYDGTGSDATISTLGLSADNVAS 183
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 39/115 (33%)
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
G T + D K + + +D + +G++ +R+ +
Sbjct: 162 YDGTGSDATISTLGLSADNVASKEGAQSSLQKLDDALVQVNGIRANMGALQNRLSSTVNN 221
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + + R+ D D+A+E+ L+ Q LS N + L
Sbjct: 222 LGISDENLSAAKSRIRDVDIAAETAELAKNNILIQSGTSVLSQANQFPSIANKLL 276
>gi|91223533|ref|ZP_01258798.1| flagellin [Vibrio alginolyticus 12G01]
gi|269967562|ref|ZP_06181614.1| flagellin FlaE [Vibrio alginolyticus 40B]
gi|91191619|gb|EAS77883.1| flagellin [Vibrio alginolyticus 12G01]
gi|269827800|gb|EEZ82082.1| flagellin FlaE [Vibrio alginolyticus 40B]
Length = 379
Score = 136 bits (341), Expect = 7e-30, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 74/188 (39%), Gaps = 3/188 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +A+ A + L L +R+SSG R++ A D+AA I+ ++S L
Sbjct: 4 TVNTNVAALVAQRHLTSATDMLNQSMERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ ++M +++ + ++Q E++ L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSKAERTALQEEVSALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+S+ I + + + + + +
Sbjct: 124 SRIAETTSFGGRKLLNGTFGTSSFQIGATAGEAVQIGLRTMQPESLGSFSMSSYQRVSSD 183
Query: 180 STDGTERY 187
T
Sbjct: 184 WTVQNGNN 191
Score = 106 bits (263), Expect = 9e-21, Method: Composition-based stats.
Identities = 28/375 (7%), Positives = 92/375 (24%), Gaps = 9/375 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+A+ ++ A D+++ ++ + + +
Sbjct: 13 VAQRHLTSATDMLNQSMERL-----SSGKRINSAKDDAAGLQISNRLQSQMRGLDVAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + ++ + +
Sbjct: 68 ANDGISIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSKAERTALQEEVSALNDELSRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ + +S I + ++ + +
Sbjct: 128 ETTSFGGRKLLNGTFGTSSFQIGATAGEAVQIGLRTMQPESLGSFSMSSYQRVSSDWTVQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
+ + + + ++
Sbjct: 188 NGNNEIVISYRDNNFEEQEIRIEAKAGDDIEELATYINGQTDKVKASVNEEGQLQLLM-- 245
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
++ D + + R ++ + + V +D +K
Sbjct: 246 --SHKDAIKYPGPTFSGGLADELELGKYVTVNRTVDSIDISTVGGAQMAVGILDDALKTV 303
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ ++G+ +R + + + + + + R+ D D A E+T++ Q QQ++
Sbjct: 304 DGSRAELGAYQNRFNHAINNLDNIHENLAASNSRIQDTDYAKETTQMVKQQILQQVSTSI 363
Query: 436 LSIVNNSTARILSLF 450
L+ + L+L
Sbjct: 364 LAQAKQAPNLALTLL 378
>gi|254228429|ref|ZP_04921855.1| bacterial flagellin N-terminus domain protein [Vibrio sp. Ex25]
gi|262393577|ref|YP_003285431.1| flagellin protein FlaF [Vibrio sp. Ex25]
gi|151939017|gb|EDN57849.1| bacterial flagellin N-terminus domain protein [Vibrio sp. Ex25]
gi|262337171|gb|ACY50966.1| flagellin protein FlaF [Vibrio sp. Ex25]
Length = 377
Score = 136 bits (341), Expect = 8e-30, Method: Composition-based stats.
Identities = 48/365 (13%), Positives = 100/365 (27%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +A+ A + L L +R+SSG R++ A D+AA I+ ++S L
Sbjct: 4 TVNTNVAALVAQRHLTSATDMLNQSMERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ ++M +++ + ++Q E+T L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSKAERTALQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G S I + + + S
Sbjct: 124 NRIAETTSFGGRKLLNGSFGKSAFQIGAASGEAVQVELKSMRSDGIDMGGFSYIANGRAS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + + T
Sbjct: 184 SDWKVKDGANDLSMSFTNRFGETETIQINAKAGDDIEELATYINGQTDKVTASVNEEGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + T + + V T + S
Sbjct: 244 QLFMAGEETSGTLSFSGDLASELGLQLKGYDAVDNIDITSVGGAQQAVAVLDTAMKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D L + ++ D + + + +
Sbjct: 304 HRAELGAYQTRFNHAINNLDNIHENLAASNSRIQDTDYAKETTQMVKQQILQQVSTSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 35/364 (9%), Positives = 91/364 (25%)
Query: 87 VMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
V T + + + S I + + + + +
Sbjct: 13 VAQRHLTSATDMLNQSMERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDVAVRNANDGI 72
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + + + + +S + T + +
Sbjct: 73 SIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSKAERTALQEEVTALNDELNRIAETTSF 132
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ A + A + + ++ +
Sbjct: 133 GGRKLLNGSFGKSAFQIGAASGEAVQVELKSMRSDGIDMGGFSYIANGRASSDWKVKDGA 192
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
S S + + T G T+ A V +
Sbjct: 193 NDLSMSFTNRFGETETIQINAKAGDDIEELATYINGQTDKVTASVNEEGQLQLFMAGEET 252
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
S + + L + ++ V+ +DT +K + ++G+
Sbjct: 253 SGTLSFSGDLASELGLQLKGYDAVDNIDITSVGGAQQAVAVLDTAMKYVDSHRAELGAYQ 312
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + + + + + + R+ D D A E+T++ Q QQ++ L+ +
Sbjct: 313 TRFNHAINNLDNIHENLAASNSRIQDTDYAKETTQMVKQQILQQVSTSILAQAKQAPNLA 372
Query: 447 LSLF 450
L+L
Sbjct: 373 LTLL 376
>gi|329895775|ref|ZP_08271151.1| Flagellar biosynthesis protein fliC [gamma proteobacterium
IMCC3088]
gi|328922137|gb|EGG29494.1| Flagellar biosynthesis protein fliC [gamma proteobacterium
IMCC3088]
Length = 391
Score = 136 bits (341), Expect = 8e-30, Method: Composition-based stats.
Identities = 68/454 (14%), Positives = 138/454 (30%), Gaps = 66/454 (14%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I TN SA + + +++S+G R++ A+D+AA +IA M S L
Sbjct: 1 MSVINTNVSATLTQNAISKNERAMSSAMEQLSTGKRINSASDDAAGLAIASRMTSQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQS 117
+ + S V A +++ ++ ++ D ++ E T+L+S
Sbjct: 61 AQAARNANDAISLVQTADGALTEVTSMLQRMRELAVQSASDTNVSADRTALNQEFTELRS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA + +NG N L +GSS
Sbjct: 121 EINRIAANTQWNGTNILDGTVGSSG----------------------------------- 145
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
E + N + + S ++ + + S +
Sbjct: 146 -------ELSFQIGANASQTISVTLDDFQTTSDSQSTTLTANTSTAASGPSATGAAQVST 198
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ L A A+ + T + + S A+ T ++ + + ++
Sbjct: 199 VVIGGTVTEGDVLTLAAGGASVSYTVTAADVATGSSTAADTVATALSTALGTVSGITKAV 258
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ ++ G+ + + L S + + + A E
Sbjct: 259 SGATITFTASSTSYGSNSFDLQVGDGGLMSGISSSEITSQSLANTAVAALDTAIGLINTE 318
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ M ++ + + SRI D AS
Sbjct: 319 RSEMGATINRLQFAADNLLNVKSNAEASRSRIEDT---------------------DYAS 357
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+T L+ Q QQ A L+ N +L+L +
Sbjct: 358 VTTELARTQIIQQAATAMLAQANQIPQTVLALLK 391
>gi|73666199|gb|AAZ79776.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Virchow]
Length = 425
Score = 136 bits (341), Expect = 8e-30, Method: Composition-based stats.
Identities = 54/424 (12%), Positives = 109/424 (25%), Gaps = 41/424 (9%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASHNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 K----------SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
+ + D VQ S ++ +
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQQKYKVSDTAATVTGYTDSATAIDKSTFAASATTL 180
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
P + D+ AA+ +
Sbjct: 181 GGTPAITGDLKFDDTTGKYYADVSGTTAKDGVYEVTVAADGKVTLTGTPTGPITAGFPST 240
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNS----------------------------DIW 288
A + + + A +A + D +
Sbjct: 241 ATKDVKQTQQENADLTEAKAALTAAGVAAAGTASVVKMSYTDNNGKTIDGGLAVKVGDDY 300
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR 348
AT + T T + + S + +
Sbjct: 301 YSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFK 360
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
A E + ID + +G++ +R + + + +
Sbjct: 361 AQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARS 420
Query: 409 RLVD 412
R+ D
Sbjct: 421 RIED 424
>gi|156975443|ref|YP_001446350.1| flagellin [Vibrio harveyi ATCC BAA-1116]
gi|156527037|gb|ABU72123.1| hypothetical protein VIBHAR_03174 [Vibrio harveyi ATCC BAA-1116]
Length = 377
Score = 136 bits (341), Expect = 8e-30, Method: Composition-based stats.
Identities = 48/365 (13%), Positives = 101/365 (27%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +A+ A + L L +R+SSG R++ A D+AA I+ ++S L
Sbjct: 4 TVNTNVAALVAQRHLTSATDMLNQSMERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ ++M +++ + ++Q E+T L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSKAERTALQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G S I + + + +
Sbjct: 124 NRIAETTSFGGRKLLNGSFGKSAFQIGAASGEAVQVELKSMRSDGIDMGGFSYVANGRAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + + T T
Sbjct: 184 SDWQVKDGANDLSMSFTNRFGETETIQINAKAGDDIEELTTYINGQTDKVTASVDEEGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + T + + V T + S
Sbjct: 244 QLFMAGEETSGTLSFSGDLASELGLQLKGYDAVDNIDITSVGGAQQAVAVLDTAMKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D L + ++ D + + + +
Sbjct: 304 HRAELGAYQNRFNHAINNLDNIHENLAASNSRIQDTDYAKETTQMVKQQILQQVSTSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 35/364 (9%), Positives = 90/364 (24%)
Query: 87 VMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
V T + + + S I + + + + +
Sbjct: 13 VAQRHLTSATDMLNQSMERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDVAVRNANDGI 72
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + + + + +S + T + +
Sbjct: 73 SIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSKAERTALQEEVTALNDELNRIAETTSF 132
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ A + A + + + +
Sbjct: 133 GGRKLLNGSFGKSAFQIGAASGEAVQVELKSMRSDGIDMGGFSYVANGRANSDWQVKDGA 192
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
S S + + T G T+ A V +
Sbjct: 193 NDLSMSFTNRFGETETIQINAKAGDDIEELTTYINGQTDKVTASVDEEGQLQLFMAGEET 252
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
S + + L + ++ V+ +DT +K + ++G+
Sbjct: 253 SGTLSFSGDLASELGLQLKGYDAVDNIDITSVGGAQQAVAVLDTAMKYVDSHRAELGAYQ 312
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + + + + + + R+ D D A E+T++ Q QQ++ L+ +
Sbjct: 313 NRFNHAINNLDNIHENLAASNSRIQDTDYAKETTQMVKQQILQQVSTSILAQAKQAPNLA 372
Query: 447 LSLF 450
L+L
Sbjct: 373 LTLL 376
>gi|313672669|ref|YP_004050780.1| flagellin domain protein [Calditerrivibrio nitroreducens DSM 19672]
gi|312939425|gb|ADR18617.1| flagellin domain protein [Calditerrivibrio nitroreducens DSM 19672]
Length = 756
Score = 136 bits (341), Expect = 9e-30, Method: Composition-based stats.
Identities = 38/288 (13%), Positives = 97/288 (33%), Gaps = 3/288 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI N +++A + + N L +R+SSGLR++ A+D+A+ +I++ ++ L
Sbjct: 4 SIYNNLMSLNAQRHITITNNMLGKSLERLSSGLRINHASDDASGMAISEKLRGQISGLKR 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
G S + A+ + + ++ ++ D +Q E+ QL+S++
Sbjct: 64 SIMNAQDGISMLQTAEGALEEVSAMLQRMRELAVQAANGTYTSNDRVELQKEVEQLKSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FN + L D + ++ + + ++ + + +
Sbjct: 124 NRISAATEFNTKKLLNGDGTALWSASDNKISALIRGNVAEGNYEISLKANKIGQNQVFKT 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + ++ + + S L + +
Sbjct: 184 DIMTLQEGKIGASYVDSASDTTNIESVRNPKTLWATGTSDYTLTLYGPASTTSPSVATIG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
+ + + P +A + A++AT
Sbjct: 244 SYLQTGSAGVIGTPNISSALTFDGYALVEITGDNASAATTYFYSAKTG 291
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 34/90 (37%)
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ + ID + IG+ +R+ + + R+ + R+ D D+A E
Sbjct: 667 QKAIPDIDNALSQVVTIRATIGAQINRLEHTIKNLTVARENMTASESRIRDLDVAEEMAT 726
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q Q + L+ N L L +
Sbjct: 727 FTRYQILGQSGMAMLAQANQIPQMALQLLK 756
>gi|227355969|ref|ZP_03840361.1| flagellin 2 [Proteus mirabilis ATCC 29906]
gi|227163957|gb|EEI48859.1| flagellin 2 [Proteus mirabilis ATCC 29906]
Length = 397
Score = 136 bits (340), Expect = 9e-30, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 79/221 (35%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN+ ++ L L +R+SSG+R++ A D+AA +IA S+ L+
Sbjct: 34 VINTNYLSLVTQNNLNRSQSALGNAIERLSSGMRINSAKDDAAGQAIANRFTSNINGLTQ 93
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + I+ +D SIQ+E+ Q ++
Sbjct: 94 ASRNANDGISVSQTTEGALNEINNNLQRIRELTVQAKNGTNSNSDITSIQNEVNQRLDEI 153
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L + T + + + + T + +
Sbjct: 154 NRVSEQTQFNGVKVLSGEKSKMTIQVGTNDNEVIEFNLDKIDNDTLGVASDNLFDAKTEK 213
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ ++ + L I V Y G +S
Sbjct: 214 KGVKETGAAIDAKDIGVSGGTSYLSGISVKEYKVDGKVSAD 254
Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/358 (11%), Positives = 93/358 (25%)
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
S+S + S I + S+ + ++ +
Sbjct: 40 LSLVTQNNLNRSQSALGNAIERLSSGMRINSAKDDAAGQAIANRFTSNINGLTQASRNAN 99
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ ++ + + + + I+ E D V +
Sbjct: 100 DGISVSQTTEGALNEINNNLQRIRELTVQAKNGTNSNSDITSIQNEVNQRLDEINRVSEQ 159
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ K + N + I + + T
Sbjct: 160 TQFNGVKVLSGEKSKMTIQVGTNDNEVIEFNLDKIDNDTLGVASDNLFDAKTEKKGVKET 219
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
A+ +G S + + S V S + + K
Sbjct: 220 GAAIDAKDIGVSGGTSYLSGISVKEYKVDGKVSADKVVLKEGSDEYVVSKSDFTLKSGTT 279
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ ++ ++ ++ +D I + K+G+I +R
Sbjct: 280 TGEIEFTGSKTTKFTADAGKDVKILNVKDDALATLDNAISKVDESRSKLGAIQNRFQSTI 339
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + + R++DAD A+E + +S Q QQ L+ N +LSL R
Sbjct: 340 NNLNNTVNNLSASRSRILDADYATEVSNMSKNQILQQAGTAVLAQANQVPQTVLSLLR 397
>gi|163801834|ref|ZP_02195731.1| flagellin [Vibrio sp. AND4]
gi|159174342|gb|EDP59146.1| flagellin [Vibrio sp. AND4]
Length = 377
Score = 136 bits (340), Expect = 9e-30, Method: Composition-based stats.
Identities = 48/365 (13%), Positives = 100/365 (27%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +A+ A + L L +R+SSG R++ A D+AA I+ ++S L
Sbjct: 4 TVNTNVAALVAQRHLTSATDMLNQSMERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ ++M +++ + ++Q E+T L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSKAERTALQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G S I + + + S
Sbjct: 124 NRIAETTSFGGRKLLNGSFGQSAFQIGAASGEAVQVELKSMRSDGIEMGGFSYIANGRAS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + + T
Sbjct: 184 SDWQVKEGASSLNMSFTDRFGETETIEINAKAGDDIEELATYINGQTDKITASVNEEGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + T + + V T + S
Sbjct: 244 QLFMAGEETSGALSFSGDLASELGLQLKGYDAVDNIDITSVGGAQQAVAVLDTAMKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D L + ++ D + + + +
Sbjct: 304 HRAELGAYQNRFDHAINNLDNIHENLAASNSRIQDTDYAKETTQMVKQQILQQVSTSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 35/364 (9%), Positives = 91/364 (25%)
Query: 87 VMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
V T + + + S I + + + + +
Sbjct: 13 VAQRHLTSATDMLNQSMERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDVAVRNANDGI 72
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + + + + +S + T + +
Sbjct: 73 SIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSKAERTALQEEVTALNDELNRIAETTSF 132
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ A + A + + ++ +
Sbjct: 133 GGRKLLNGSFGQSAFQIGAASGEAVQVELKSMRSDGIEMGGFSYIANGRASSDWQVKEGA 192
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
S + S + + T G T+ A V +
Sbjct: 193 SSLNMSFTDRFGETETIEINAKAGDDIEELATYINGQTDKITASVNEEGQLQLFMAGEET 252
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
S + + L + ++ V+ +DT +K + ++G+
Sbjct: 253 SGALSFSGDLASELGLQLKGYDAVDNIDITSVGGAQQAVAVLDTAMKYVDSHRAELGAYQ 312
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + + + + + R+ D D A E+T++ Q QQ++ L+ +
Sbjct: 313 NRFDHAINNLDNIHENLAASNSRIQDTDYAKETTQMVKQQILQQVSTSILAQAKQAPNLA 372
Query: 447 LSLF 450
L+L
Sbjct: 373 LTLL 376
>gi|61807192|gb|AAX55760.1| flagellin [Vibrio harveyi]
Length = 379
Score = 136 bits (340), Expect = 9e-30, Method: Composition-based stats.
Identities = 43/289 (14%), Positives = 91/289 (31%), Gaps = 3/289 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + L +R+SSG R++ A D+AA I+ + + + L
Sbjct: 4 NVNTNVSAMTAQRYLNKASNELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M+++ ++ +++ ++ K++ E+T LQ +L
Sbjct: 64 AMRNANDGISIAQTAEGAMNESTSILQRMRDLSLQSANGTNSASERKALNEEVTALQDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G ++ I S + I + +
Sbjct: 124 NRIAETTSFGGRKLLNGSFGEASFQIGASSGEAIIMGLTSIRADDHRMGGMSFVSEQGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G + + + + + T +
Sbjct: 184 KNWGVPDNARDLKFEFTGKDGEPVTLNINAKTGDDIEELATYINGQTDIFKASVDQDGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
+ + + + + + +G S
Sbjct: 244 QIFIAQPELAEDFSISGGLASQLGLNTDNGQYTTVQDIDVNTVGGSQNA 292
Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/386 (11%), Positives = 99/386 (25%), Gaps = 10/386 (2%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++KA + ++T ++ + + + +
Sbjct: 4 NVNTNVSAM-TAQRYLNKASNELNTSMERL-----SSGNRINSAKDDAAGLQISNRLTAQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + ++ + +
Sbjct: 58 SRGLDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLSLQSANGTNSASERKALNEEVT 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ S +AS I + ++A + +
Sbjct: 118 ALQDELNRIAETTSFGGRKLLNGSFGEASFQIGASSGEAIIMGLTSIRADDHRMGGMSFV 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
+ + + DI AT N T +
Sbjct: 178 SEQGKDKNWGVPDNARDLKFEFTGKDGEPVTLNINAKTGDDIEELATYINGQTDIFKASV 237
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
K+ + + N + V
Sbjct: 238 DQDGKLQIFI----AQPELAEDFSISGGLASQLGLNTDNGQYTTVQDIDVNTVGGSQNAV 293
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID +K + +G+ +R+ + +++ VE R+ D D A E+T+L+
Sbjct: 294 GIIDAALKYVDSQRADLGAKQNRLSHSISNLANIQENVESSKSRIKDTDFAKETTQLTKS 353
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ L+ +SL +
Sbjct: 354 QILQQAGTSILAQAKQLPNSAMSLLQ 379
>gi|317052333|ref|YP_004113449.1| flagellin domain-containing protein [Desulfurispirillum indicum S5]
gi|316947417|gb|ADU66893.1| flagellin domain protein [Desulfurispirillum indicum S5]
Length = 831
Score = 136 bits (340), Expect = 9e-30, Method: Composition-based stats.
Identities = 49/416 (11%), Positives = 118/416 (28%), Gaps = 21/416 (5%)
Query: 1 MTS-ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M+S I TN ++++ LR + L ++++SG+R++ +D+A+ +I++ M+
Sbjct: 1 MSSYINTNIPSLNSQNHLRFHSQQLSSTIEKLASGMRINRGSDDASGLAISEKMRGQIRG 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQ 116
+ G S V A +++ ++ ++ D +Q EI QL+
Sbjct: 61 VDRAMANAQDGMSLVQTADGALNETAGILQRMRELAVQAANDTYTPSDRLHVQREIDQLR 120
Query: 117 SQLRDIARGSSFNGENWLRTDLG--SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
++ +A + FN + L D S + R +G Q+ +
Sbjct: 121 QEIDRVASSTEFNTKKLLSGDAAARWSVSDPGSLEAIIRDRVQSGTYQLDVSAKAGKNQV 180
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ + T + ++ A+ + T T
Sbjct: 181 LRSNIMTLRDGAFAGDILTGNGVALTASTNSSGIAGIYAAEGVRTGSLDERTYHINVTSY 240
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A +G++ + + A + +
Sbjct: 241 DVANTTIEGNSTISITAANVGFMGVYQQAGSNWAITAGGGQDAATANQQTNIVSFGGIVA 300
Query: 295 NSITSDPGYTNST---------------VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGY 339
+ T S L + + +
Sbjct: 301 GRHGYLELRFDDDVDVDSNPDVTGLASVRFIDVKTGEAGAWASVDLVAGELNLAGSGAQT 360
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
A+ ++ + I+ + A + +G+ + +I +
Sbjct: 361 FDGAAVFGGGASLSVTGNVKQGDKALFSINAAVAAADVGSMSMGAGAIKIDERFSN 416
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 45/98 (45%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ E ++ ID I + A GK+G++++R+ + + + ++++ R+ D
Sbjct: 732 MVLDTGLANEAIARIDRAIGMVSEARGKMGAVANRMDHTINSLAVAHESMQAAESRIRDV 791
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++A E + L Q + A L N ++SL R
Sbjct: 792 NVAKEISNLVRSQMLTESATIMLGKANMLPDGVMSLLR 829
>gi|73666239|gb|AAZ79796.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Newport]
Length = 434
Score = 136 bits (340), Expect = 1e-29, Method: Composition-based stats.
Identities = 60/433 (13%), Positives = 123/433 (28%), Gaps = 50/433 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSF--------------------------------IRDDNGKVQITTIDYYLDPET 174
+G +T D
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKAYDVSATAAMDPKSFTDGTKNLTAPDATAIKAA 180
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ ++T + L ++ K + + + ++ A T A
Sbjct: 181 LGNPAATGDSLSATLSFKDGKYYATVAGYTNAADTSKNGKYEVNVDSATGAVTFNAAPTK 240
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A T D + P+ + S + + AA + + +
Sbjct: 241 ATVTGDTTVTKVQVNAPVAVSTDVKKALEDGGVSNADATAAKLVKMSYTDKNGKSIDGGY 300
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK---------------EIDSGY 339
Y + G V T + + K
Sbjct: 301 ALEAGGKYYAATYDEGTGKITANVTTYTDSTGVTKTAANQLGGVDGKTEVVTIDGKTYNA 360
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
S + + A E ++ ID + A +G++ +R + +
Sbjct: 361 SKAAGHDFKAQPELAEAAAKTTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITNLGNT 420
Query: 400 RDAVEKGVGRLVD 412
+ + + R+ D
Sbjct: 421 VNNLSEARSRIED 433
>gi|17366580|sp|Q60246|FLAA_VIBAN RecName: Full=Flagellin A
gi|974706|gb|AAB05995.1| flagellin A [Listonella anguillarum serovar O1]
Length = 379
Score = 136 bits (340), Expect = 1e-29, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 70/183 (38%), Gaps = 3/183 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L L +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 TVNTNVSAMTAQRYLNKATGELNTSMERLSSGNKINSAKDDAAGLQISNRLTAQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M+++ ++ +++ ++ +++ E T LQ +L
Sbjct: 64 AMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALDEESTALQDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G ++ I S + I
Sbjct: 124 NRIAETTSFGGRKLLNGSFGEASFQIGASSGEAIIMGLTSIRADDFRMGGQSFLAEQGKD 183
Query: 180 STD 182
Sbjct: 184 KDW 186
Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats.
Identities = 32/365 (8%), Positives = 84/365 (23%), Gaps = 2/365 (0%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQL--RDIARGSSFNGENWLRTDLGSSTASIA 146
NK T + + S ++I + I+ + ++
Sbjct: 15 QRYLNKATGELNTSMERLSSGNKINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISI 74
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + +Q S + ++ ++
Sbjct: 75 AQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALDEESTALQDELNRIAETTSFGG 134
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ + G S + + + + D G +
Sbjct: 135 RKLLNGSFGEASFQIGASSGEAIIMGLTSIRADDFRMGGQSFLAEQGKDKDWGVPAGARD 194
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ A + + + E
Sbjct: 195 LKFEFTTQAGELVTLDVLAKDGDDIEELATYINGQTDKLKASVDQDGKLQIFAAEPNLQG 254
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + V +D ++ + ++G+
Sbjct: 255 DLAISGGLATELGLNGGPGVKTTVQDIDITSVGGSQNAVGVLDAALRYVDSQRAELGAKQ 314
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R+ + + +++ VE R+ D D A E+T+++ Q QQ L+
Sbjct: 315 NRLSHSINNLANIQENVEASNSRIKDTDFAKETTQMTKAQILQQAGTSILAQAKQLPNSA 374
Query: 447 LSLFR 451
+SL +
Sbjct: 375 MSLLQ 379
>gi|284045755|ref|YP_003396095.1| flagellin domain protein [Conexibacter woesei DSM 14684]
gi|283949976|gb|ADB52720.1| flagellin domain protein [Conexibacter woesei DSM 14684]
Length = 263
Score = 136 bits (340), Expect = 1e-29, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A +A + L + L +R+SSG R++ AAD+AA +I++ ++ G L+
Sbjct: 5 INTNVEAFNAHRNLEGTSTKLAKSMERLSSGFRINRAADDAAGLAISEKLRGQIGGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ G S V A+ +++ ++ ++ D +I SE+ QL ++
Sbjct: 65 RRNVQDGISLVQTAEGALTEVHSMLQRVRELKVQHENGTLAAGDRGAIASEVDQLTREID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+ + FNG L + + +
Sbjct: 125 RLGVTTQFNGITLLDGRNPAIRFQVGANDGEVI 157
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 39/95 (41%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+L + + +D I + G++ +R+ + + + ++ + R+ D DMA
Sbjct: 169 TRLTIASTLGALDAAIGIVSDQRAAFGAVQNRLEHTYNNLSVYQENLSASESRIRDVDMA 228
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+E + QQ L+ + +LSL R
Sbjct: 229 AEMVTFTKNNILQQAGTSMLAQAQQAPQSVLSLLR 263
>gi|153836942|ref|ZP_01989609.1| polar flagellin B/D [Vibrio parahaemolyticus AQ3810]
gi|149749715|gb|EDM60460.1| polar flagellin B/D [Vibrio parahaemolyticus AQ3810]
Length = 397
Score = 136 bits (340), Expect = 1e-29, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 74/187 (39%), Gaps = 3/187 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 23 NVNTNVSAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 82
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 83 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 142
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + + + +
Sbjct: 143 NRIAETTSFGGNKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQAESGKG 202
Query: 180 STDGTER 186
+
Sbjct: 203 KDWNVAQ 209
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 46/385 (11%), Positives = 95/385 (24%), Gaps = 11/385 (2%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++ A T ++ + + +
Sbjct: 23 NVNTNVSAM-TAQRYLNNANSAQQTSMERL-----SSGFKINSAKDDAAGLQISNRLNVQ 76
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + ++ + +
Sbjct: 77 SRGLDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVT 136
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ + S I + +++ N
Sbjct: 137 ALNDELNRIAETTSFGGNKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQ 196
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A A S + S DI AT N T +
Sbjct: 197 AESGKGKDWNVAQGKNDLKISLTDSFGQEQEININAKAGDDIEELATYINGQTDLVKASV 256
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
K+ E + + +T +E V
Sbjct: 257 DQDGKLQIFAGNNKVEGEVS-----FSGGLSGELGLGDDKKNVTVDTIDVTSVGGAQESV 311
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ ID +K + ++G+ +R + + + + V R+ D D A E+T ++
Sbjct: 312 AIIDAALKYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTAMTKS 371
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q Q + L+ + LSL
Sbjct: 372 QILSQASSSILAQAKQAPNSALSLL 396
>gi|269961608|ref|ZP_06175970.1| Flagellin D [Vibrio harveyi 1DA3]
gi|269833649|gb|EEZ87746.1| Flagellin D [Vibrio harveyi 1DA3]
Length = 377
Score = 136 bits (340), Expect = 1e-29, Method: Composition-based stats.
Identities = 48/365 (13%), Positives = 114/365 (31%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + + + +
Sbjct: 124 NRIAETTSFGGNRLLNGTYGTQSFQIGADNGEAVMLNLKDMRSDNKMMGGVSYQAENGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
E + Q + + T +
Sbjct: 184 KNWNVEAGKNDLKISLTDSFGQEQEINISAKAGDDIEELATYINGQTDLVKASVDQDGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + + G K T + + + + S
Sbjct: 244 QVFAGNNKVEGDVEFSGGLSGELGLSDGKKVTVDTIDVTSVGGAQESVAIIDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D + ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 106 bits (263), Expect = 9e-21, Method: Composition-based stats.
Identities = 39/362 (10%), Positives = 90/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + K + +
Sbjct: 135 NRLLNGTYGTQSFQIGADNGEAVMLNLKDMRSDNKMMGGVSYQAENGKDKNWNVEAGKND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
S+ S + N + T G T+ A V
Sbjct: 195 LKISLTDSFGQEQEINISAKAGDDIEELATYINGQTDLVKASVDQDGKLQVFAGNNKVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
SG ++ +T +E V+ ID +K + ++G+ +R
Sbjct: 255 DVEFSGGLSGELGLSDGKKVTVDTIDVTSVGGAQESVAIIDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T+++ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILAQAKQAPNSALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|254228430|ref|ZP_04921856.1| bacterial flagellin N-terminus domain protein [Vibrio sp. Ex25]
gi|262393578|ref|YP_003285432.1| flagellin protein FlaD [Vibrio sp. Ex25]
gi|262394930|ref|YP_003286784.1| flagellin protein FlaD [Vibrio sp. Ex25]
gi|151939018|gb|EDN57850.1| bacterial flagellin N-terminus domain protein [Vibrio sp. Ex25]
gi|262337172|gb|ACY50967.1| flagellin protein FlaD [Vibrio sp. Ex25]
gi|262338524|gb|ACY52319.1| flagellin protein FlaD [Vibrio sp. Ex25]
Length = 377
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 47/365 (12%), Positives = 113/365 (30%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQAESGKG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + Q + + T +
Sbjct: 184 KDWNVAEGKNDLKINLTDSYGQEQEINISAKAGDDIEELATYINGQTDLVKASVDQDGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + G K T + + + + S
Sbjct: 244 QIFAGNNKVEGEVEFSGGLSGELGLGEGKKVTVDTIDVTSVGGAQESVAIIDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D + ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/362 (10%), Positives = 92/362 (25%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + K + + + +
Sbjct: 135 NKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQAESGKGKDWNVAEGKND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
++ S + N + T G T+ A V
Sbjct: 195 LKINLTDSYGQEQEINISAKAGDDIEELATYINGQTDLVKASVDQDGKLQIFAGNNKVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ SG + +T +E V+ ID +K + ++G+ +R
Sbjct: 255 EVEFSGGLSGELGLGEGKKVTVDTIDVTSVGGAQESVAIIDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T+++ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILAQAKQAPNSALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|269965415|ref|ZP_06179534.1| Flagellin D [Vibrio alginolyticus 40B]
gi|269829894|gb|EEZ84124.1| Flagellin D [Vibrio alginolyticus 40B]
Length = 377
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 47/365 (12%), Positives = 113/365 (30%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQAESGKG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + Q + + T +
Sbjct: 184 KDWNVAEGKNDLKINLTDSYGQEQEINISAKAGDDIEELATYINGQTDLVKASVDQDGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + G K T + + + + S
Sbjct: 244 QIFAGNNKVEGEVEFSGGLSGELGLGEGKKVTVDTIDVTSVGGAQESVAIIDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D + ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/362 (10%), Positives = 91/362 (25%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S + + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + K + + + +
Sbjct: 135 NKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQAESGKGKDWNVAEGKND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
++ S + N + T G T+ A V
Sbjct: 195 LKINLTDSYGQEQEINISAKAGDDIEELATYINGQTDLVKASVDQDGKLQIFAGNNKVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ SG + +T +E V+ ID +K + ++G+ +R
Sbjct: 255 EVEFSGGLSGELGLGEGKKVTVDTIDVTSVGGAQESVAIIDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T+++ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILAQAKQAPNSALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|68164529|gb|AAY87258.1| predicted flagellin [uncultured bacterium BAC17H8]
Length = 837
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 43/212 (20%), Positives = 83/212 (39%), Gaps = 3/212 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT+I TN +A++A L N ++E ++SSG +V+ AAD+AA +IA M + L
Sbjct: 1 MTAINTNTAALNAQYYLAKSNKDMESSMAKLSSGQKVNSAADDAAGLAIASRMTAQIRGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQS 117
+ S A+ M + +++ I+ + S+ +E+ L++
Sbjct: 61 AMAVKNSNDSMSLAQTAEGAMEEVTNMLQRIRELAVQSANGTMNTGDRASLDAEVQALKA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +A +SFN +N L ++ K+ ++ + K + L+
Sbjct: 121 EIDRVATTTSFNSQNLLDGSYKATFQIGDKNGQTVGLQIGSVKTDSLGLGEGSSGSNTLV 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
S T G I+
Sbjct: 181 SSRIPVTGATGSPFAVALSNAVDAGDISINGQ 212
Score = 121 bits (301), Expect = 4e-25, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 66/204 (32%)
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
+ +G + + S A T + N+ +
Sbjct: 634 NTGDTVMTFNNASGKLANGHATMTFKRSDDTKLFSTISTSGTAVTSYASIKLDSVNNTPI 693
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ + D + ++ + + + A + I
Sbjct: 694 KIDIGDGETNAATTHGFIESNVGAADFDVNEATMSASGGSSMSGLSVTSASAANAALDTI 753
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D I + G +G++ +R+ + + + +A GR++DAD A E++ L+ Q
Sbjct: 754 DVAIDTVNSIRGDLGALQNRLEYTINNLSSISNATTGARGRILDADFAKETSELTKHQIL 813
Query: 429 QQLAVQALSIVNNSTARILSLFRG 452
Q A L+ N S IL+L +G
Sbjct: 814 TQAATSMLAQANQSKQGILALLQG 837
>gi|238928168|ref|ZP_04659928.1| flagellin [Selenomonas flueggei ATCC 43531]
gi|238884128|gb|EEQ47766.1| flagellin [Selenomonas flueggei ATCC 43531]
Length = 467
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 66/478 (13%), Positives = 133/478 (27%), Gaps = 43/478 (8%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N SA++ L L +VSSG++++ A D+A+ +I++ M+ +L
Sbjct: 4 VVKNNMSAVNTLNVLNKNQSALSQSLQKVSSGMKINSAGDDASGMAISERMRVQVRSLDQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G++ + A+ + ++V+ T+K K D + IQ E+ +L Q+
Sbjct: 64 DDKNTKNGTALLRTAEGAVQSTVEVLKTLKEKAINAANDTNTDEDRRLIQKEVDKLIDQI 123
Query: 120 RDIARGSSFNGENWL------------RTDLGSSTASIAKSVIGSFIRDDNGKVQITTID 167
+ A + + T + + K +
Sbjct: 124 DENALTTYNGKYLIDGSRNGFVGGPGGQGTFTCFTNTSLSTDTTGLTFLTELKRRDGNDL 183
Query: 168 YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
L +T+ DG + ++ + S T
Sbjct: 184 GILPSDTLTASWVKDGVTYTRSVSPIGDTMDLAGAIRLVTESHAGLGPTNELIGTDAYGR 243
Query: 228 SGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
QA ++ + ++ A IR N
Sbjct: 244 PVYTPDNKPGITVQANKPGVDGQIAGLTFCVTDSEGKMRNDVNATLDAFKETIRGQNPSE 303
Query: 288 WVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT 347
+ ++ D + P + +
Sbjct: 304 DNSLVLQTGTRANQEIKVGFTDMRSAALGLQSQSGNGWDHQPLPPPMSPLPPNFTDTQVV 363
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM-------- 399
+ A ++ D + AT A IG++
Sbjct: 364 GMGPKVQLTTREAANAAINVFDNALIKATDEAVNIGAV--------------QNRLQYTS 409
Query: 400 ------RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ V+ + DADMA E T + Q A L+ N +++ +LSL +
Sbjct: 410 NNLIVAAENVQASESTIRDADMAKEMTAYTKNNVLTQAAQAMLAQANQNSSTVLSLLK 467
>gi|269960651|ref|ZP_06175023.1| Flagellin D [Vibrio harveyi 1DA3]
gi|269834728|gb|EEZ88815.1| Flagellin D [Vibrio harveyi 1DA3]
Length = 377
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 48/365 (13%), Positives = 114/365 (31%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + + + +
Sbjct: 124 NRIAETTSFGGNRLLNGTYGTQSFQIGADNGEAVMLNLKDMRSDNKMMGGVSYQADNGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
E + Q + + T +
Sbjct: 184 KNWNVEAGKNDLKISLTDSFGQEQEINISAKAGDDIEELATYINGQTDLVKASVDQDGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + + G K T + + + + S
Sbjct: 244 QVFAGNNKVEGDVEFSGGLSGELGLSDGKKVTVDTIDVTSVGGAQESVAIIDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D + ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats.
Identities = 39/362 (10%), Positives = 90/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + K + +
Sbjct: 135 NRLLNGTYGTQSFQIGADNGEAVMLNLKDMRSDNKMMGGVSYQADNGKDKNWNVEAGKND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
S+ S + N + T G T+ A V
Sbjct: 195 LKISLTDSFGQEQEINISAKAGDDIEELATYINGQTDLVKASVDQDGKLQVFAGNNKVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
SG ++ +T +E V+ ID +K + ++G+ +R
Sbjct: 255 DVEFSGGLSGELGLSDGKKVTVDTIDVTSVGGAQESVAIIDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T+++ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILAQAKQAPNSALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|91223534|ref|ZP_01258799.1| flagellin [Vibrio alginolyticus 12G01]
gi|91191620|gb|EAS77884.1| flagellin [Vibrio alginolyticus 12G01]
gi|222820584|gb|ACM67642.1| flagellin [Vibrio alginolyticus]
Length = 377
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 47/365 (12%), Positives = 113/365 (30%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQAESGKG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + Q + + T +
Sbjct: 184 KDWNVAEGKNDLKINLTDSYGQEQEINISAKAGDDIEELATYINGQTDLVKASVDQDGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + G K T + + + + S
Sbjct: 244 QIFAGNNKVEGEVEFSGGLSGELGLGEGKKVTVDTIDVTSVGGAQESVAIIDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D + ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTAMTKSQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/362 (10%), Positives = 90/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S + + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + K + + + +
Sbjct: 135 NKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQAESGKGKDWNVAEGKND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
++ S + N + T G T+ A V
Sbjct: 195 LKINLTDSYGQEQEINISAKAGDDIEELATYINGQTDLVKASVDQDGKLQIFAGNNKVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ SG + +T +E V+ ID +K + ++G+ +R
Sbjct: 255 EVEFSGGLSGELGLGEGKKVTVDTIDVTSVGGAQESVAIIDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T ++ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTAMTKSQILSQASSSILAQAKQAPNSALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|192361599|ref|YP_001982391.1| flagellin [Cellvibrio japonicus Ueda107]
gi|190687764|gb|ACE85442.1| flagellin [Cellvibrio japonicus Ueda107]
Length = 698
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 3/181 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN ++++A ++L L+ +R+SSG R++ A D+AA +I+ M S L
Sbjct: 3 LVINTNVASLNAQRQLMSSGNALDRATERLSSGARINSAKDDAAGLAISNRMTSQVRGLD 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G S + A+ +S++ +++ ++ +D ++ +E+ QL S+
Sbjct: 63 QAIRNANDGVSLIQTAEGALSESTNILQRMRELAVQSANGIYTASDRATLNAEVKQLVSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA+ +SFNG+N L LG+ + S + T + +
Sbjct: 123 LDRIAKTTSFNGQNLLDGKLGNIDLQVGASANQTITLKVPAMDAKTLGMGSTSVDLMGGA 182
Query: 179 S 179
S
Sbjct: 183 S 183
Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 51/137 (37%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ D+ + + + + + ++ + ID +
Sbjct: 562 NNGNPISVQHKDTAAQTKTGLLDSNIATGGAFGTAIASISIDTQANAQKAIKVIDNALTT 621
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ ++G++++R+ + + + R+ DAD A+E+ LS Q QQ A
Sbjct: 622 ISDVRSELGAVNNRLDFTVSNLANISEKTSAARSRITDADFAAETAALSRSQVLQQAATA 681
Query: 435 ALSIVNNSTARILSLFR 451
L+ N ++LSL R
Sbjct: 682 MLAQSNARPQQVLSLLR 698
>gi|317128465|ref|YP_004094747.1| flagellin domain protein [Bacillus cellulosilyticus DSM 2522]
gi|315473413|gb|ADU30016.1| flagellin domain protein [Bacillus cellulosilyticus DSM 2522]
Length = 550
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 70/196 (35%), Gaps = 3/196 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A+++ + L +++SSGLR++ AAD+AA +I++ M+S L
Sbjct: 3 INNNIQALNSYRNLYQNQMQTSKNLEKLSSGLRINRAADDAAGLAISEKMRSQIRGLKQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S + ++ M + ++ ++ D + IQ EI QL+ ++
Sbjct: 63 ERNALDGISLMQTSEGAMQEVHTMLQRMRELAVQASNDTNTEYDREQIQKEIDQLKLEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN L + SV + + Y + S
Sbjct: 123 SISEKTEFNTRRLLDGSSAVLSVVDRNSVETNLVGSPRVTDARIDSGNYSLAVHDVTMSY 182
Query: 181 TDGTERYGLLDRNHKI 196
GL
Sbjct: 183 DVKQPFAGLGQTGAND 198
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 43/132 (32%)
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
T ++ + + + +D I + A
Sbjct: 419 TNNSLAFQIGPNTNQNVMIDIPKMDTVELGIEDLNVLTNENANNAIFVLDQAINKISEAR 478
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
K+G+ +R+ + +++ + + R+ DADMA E T + Q A L+
Sbjct: 479 SKLGATQNRMEHTINNLQVTHENLTAAESRIRDADMALEMTEFTRNNILNQSATAMLAQA 538
Query: 440 NNSTARILSLFR 451
N +L L +
Sbjct: 539 NQLPQGVLQLLQ 550
>gi|37199425|dbj|BAC95256.1| polar flagellin FlaB [Vibrio vulnificus YJ016]
Length = 396
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 46/365 (12%), Positives = 108/365 (29%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +AM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 23 NVNTNVAAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 82
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 83 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDEL 142
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ I + + + + +
Sbjct: 143 NRIAETTSFGGNKLLNGTYGTKAMQIGADNGEAVMLSLKDMRSDNVMMGGVSYQAEEGKD 202
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + T
Sbjct: 203 KNWNVAAGDNDLTIALTDSFGNEQEIEINAKAGDDIEELATYINGQTDLVKASVGEGGKL 262
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + + G T ++ + + + S
Sbjct: 263 QIFAGNNKVQGEISFSGSLAGELGLGEGKNVTVDTIDVTTVQGAQESVAIVDAALKYVDS 322
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D L T+ + + +
Sbjct: 323 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTQLTKTQILSQASSSILA 382
Query: 360 AMEEM 364
++
Sbjct: 383 QAKQA 387
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/391 (9%), Positives = 101/391 (25%), Gaps = 1/391 (0%)
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVM-STIKNKITAGVERGTDSKSIQSEITQLQSQL 119
+ IG + +A + + N + + + S +I +
Sbjct: 5 DVGNRNIGKSIGEFIMAVNVNTNVAAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDA 64
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ + N ++ + + + + + +S
Sbjct: 65 AGLQISNRLNVQSRGLDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNS 124
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ + + + + A A + +
Sbjct: 125 KSERVAIQEEVTALNDELNRIAETTSFGGNKLLNGTYGTKAMQIGADNGEAVMLSLKDMR 184
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + ++ S + + + T
Sbjct: 185 SDNVMMGGVSYQAEEGKDKNWNVAAGDNDLTIALTDSFGNEQEIEINAKAGDDIEELATY 244
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G T+ A VG + +G + +T
Sbjct: 245 INGQTDLVKASVGEGGKLQIFAGNNKVQGEISFSGSLAGELGLGEGKNVTVDTIDVTTVQ 304
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+E V+ +D +K + ++G+ +R + + + + V R+ D D A E+
Sbjct: 305 GAQESVAIVDAALKYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKET 364
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLF 450
T+L+ Q Q + L+ + LSL
Sbjct: 365 TQLTKTQILSQASSSILAQAKQAPNSALSLL 395
>gi|153834131|ref|ZP_01986798.1| flagellin [Vibrio harveyi HY01]
gi|148869501|gb|EDL68499.1| flagellin [Vibrio harveyi HY01]
Length = 377
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 47/365 (12%), Positives = 101/365 (27%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +A+ A + L L +R+SSG R++ A D+AA I+ ++S L
Sbjct: 4 TVNTNVAALVAQRHLTSATDMLNQSMERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ ++M +++ + ++Q E+T L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSKAERTALQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G S I + + + +
Sbjct: 124 NRIAETTSFGGRKLLNGSFGKSAFQIGAASGEAVQVELKSMRSDGIDMGGFSYIANGRAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + + T +
Sbjct: 184 SDWQVKDGANELSMSFTNRFGETETIQINAKAGDDIEELATYINGQTDKVTASVNEDGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + T + + V T + S
Sbjct: 244 QLFMAGEETSGTLSFSGDLASELGLQLKGYDAVDNIDITSVGGAQQAVAVLDTAMKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D L + ++ D + + + +
Sbjct: 304 HRAELGAYQNRFNHAINNLDNIHENLAASNSRIQDTDYAKETTQMVKQQILQQVSTSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 35/364 (9%), Positives = 90/364 (24%)
Query: 87 VMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
V T + + + S I + + + + +
Sbjct: 13 VAQRHLTSATDMLNQSMERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDVAVRNANDGI 72
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + + + + +S + T + +
Sbjct: 73 SIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSKAERTALQEEVTALNDELNRIAETTSF 132
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ A + A + + + +
Sbjct: 133 GGRKLLNGSFGKSAFQIGAASGEAVQVELKSMRSDGIDMGGFSYIANGRANSDWQVKDGA 192
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
S S + + T G T+ A V +
Sbjct: 193 NELSMSFTNRFGETETIQINAKAGDDIEELATYINGQTDKVTASVNEDGQLQLFMAGEET 252
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
S + + L + ++ V+ +DT +K + ++G+
Sbjct: 253 SGTLSFSGDLASELGLQLKGYDAVDNIDITSVGGAQQAVAVLDTAMKYVDSHRAELGAYQ 312
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + + + + + + R+ D D A E+T++ Q QQ++ L+ +
Sbjct: 313 NRFNHAINNLDNIHENLAASNSRIQDTDYAKETTQMVKQQILQQVSTSILAQAKQAPNLA 372
Query: 447 LSLF 450
L+L
Sbjct: 373 LTLL 376
>gi|73666281|gb|AAZ79817.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Anatum]
gi|73666289|gb|AAZ79821.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Anatum]
Length = 434
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 60/433 (13%), Positives = 124/433 (28%), Gaps = 50/433 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSF--------------------------------IRDDNGKVQITTIDYYLDPET 174
+G +T D
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKAYDVSATAAMDPKSFTDGTKNLTAPDATAIKAA 180
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ ++T + L ++ K + + + ++ A T A
Sbjct: 181 LGNPTATGDSLSATLSFKDGKYYATVAGYTNAADTSKNGKYEVNVDSATGAVTFNAAPTK 240
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A T D + P+ + S + + AA + + +
Sbjct: 241 ATVTGDTTVTKVQVNAPVAVSTDVKKALEDGGVSNADATAAKLVKMSYTDKNGKSIDGGY 300
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK---------------EIDSGY 339
Y + G V T + + + K
Sbjct: 301 ALEAGGKYYAATYDEGTGKITANVTTYTDSTGATKTAANQLGGVDGKTEVVTIDGKTYNA 360
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
S + + A E ++ ID + A +G++ +R + +
Sbjct: 361 SKAAGHDFKAQPELAEAAAKTTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITNLGNT 420
Query: 400 RDAVEKGVGRLVD 412
+ + + R+ D
Sbjct: 421 VNNLSEARSRIED 433
>gi|126734097|ref|ZP_01749844.1| flagellin-like protein [Roseobacter sp. CCS2]
gi|126716963|gb|EBA13827.1| flagellin-like protein [Roseobacter sp. CCS2]
Length = 512
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 106/512 (20%), Positives = 173/512 (33%), Gaps = 61/512 (11%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SILTN+SAM A Q L+ IN +L Q +S+G V+ A DN+A W+I+++M+SD
Sbjct: 1 MASILTNNSAMVALQTLKSINNDLSKTQSMISTGKEVASAKDNSAVWAISKVMESDVKGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
A+S+++ LG S V +A+ G D+++ +K KI A D +Q+++ + Q+
Sbjct: 61 KAISESLSLGESSVAVARNGAETVTDLLNDMKEKIVASQGENVDRTKLQADVDAITDQIA 120
Query: 121 DIARGSSFNGENWLRTD------------------------------------------- 137
+ + FNG N L
Sbjct: 121 SVVGAAQFNGLNMLSGTDSVNILSSLDRGSDGTVSSSNITVARQDLSTDAGVFGTGTDLA 180
Query: 138 ---LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+ +IA G + + T ET + + +
Sbjct: 181 ANVATTLGGNIAADGTGDAFSNGANVLGATVAGTVTIGETYNVQVAGETVSFTTTAATTA 240
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ + + + +T+ ++ + A A
Sbjct: 241 NLAEGLTAALNTAGIEDITASFTGSVISISSTSKFDDVEVNTSGNGAATFALQANNVTAA 300
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
+ T G+ S+ A + G + +
Sbjct: 301 VGTTASQTIGSRASEIAFSATAGVADGDGYRATIGGVNFDYVAGPGEIFEDVARGLKTVI 360
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID----- 369
+T + + + A + +D
Sbjct: 361 DGAGVENISTNVKQDETTGAWVLQIDNDGAVQSLVEAGAAGGTATGGLVGLDKLDVTTDE 420
Query: 370 ---TQIKCA-------TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ AA GS RI Q DFI + D+++ G+G LVDAD+ S
Sbjct: 421 GTEAALANIETYINTTIDAAADFGSSQGRIETQSDFISKLTDSLKSGIGALVDADLEETS 480
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQ QQQL VQ+LSI N + ILSLFR
Sbjct: 481 ARLQALQVQQQLGVQSLSIANQAPQTILSLFR 512
>gi|19910965|dbj|BAB87732.1| flagellin protein FliC(S) [Clostridium septicum]
Length = 377
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 58/141 (41%), Gaps = 3/141 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA SI++ M+ L
Sbjct: 3 INHNMNAMNAHRNMATNTVATGKSMEKLSSGLRINRAGDDAAGLSISEKMRGQIRGLEQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + + +++ ++ ++ D + E+ QL ++
Sbjct: 63 SRNSQDGISLIQTTEGALNETHSILQRMRELSVQASNDTNTAEDRGQLSKELDQLTQEID 122
Query: 121 DIARGSSFNGENWLRTDLGSS 141
I+ + FN + L
Sbjct: 123 RISSQTQFNKMDVLNGKGDEP 143
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 26/66 (39%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ ID I+ + ++G+ +R+ + + ++ R+ D DMA+E
Sbjct: 296 SSIKEIDRAIEKVSTQRSQLGAYQNRLEHTIKNVDNAAENLQAAESRVRDVDMANEMMTF 355
Query: 423 SALQTQ 428
S
Sbjct: 356 SKNNIL 361
>gi|307700473|ref|ZP_07637511.1| flagellin protein [Mobiluncus mulieris FB024-16]
gi|307614342|gb|EFN93573.1| flagellin protein [Mobiluncus mulieris FB024-16]
Length = 566
Score = 135 bits (338), Expect = 2e-29, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 51/142 (35%)
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
T + T D + + + +T+ + + ++++ +D
Sbjct: 425 MDHVFTQLGATAAGTGDKPVAWAAKKYADTTQQKDYVTQDVDFLSVETHEKAQKLIDMLD 484
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+I + A +G+I +R + + + + R+ D DMA E + + Q
Sbjct: 485 NKINSVSTARANLGAIQNRFEHTITNLNVAVENLAASESRIRDTDMAQEMMQFTRNQILS 544
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 545 QAGTSMLAQANQVPQGVLSLLR 566
>gi|89094888|ref|ZP_01167820.1| flagellin FliC [Oceanospirillum sp. MED92]
gi|89080845|gb|EAR60085.1| flagellin FliC [Oceanospirillum sp. MED92]
Length = 601
Score = 135 bits (338), Expect = 2e-29, Method: Composition-based stats.
Identities = 43/369 (11%), Positives = 104/369 (28%), Gaps = 3/369 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I +N +++A + L + +R++SG R++ AAD+AA +I+ M S L
Sbjct: 4 VINSNIMSLNAQRNLMISQGDQNQAMERLTSGKRINSAADDAAGLAISNRMTSQVRGLDQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ + + +++ ++ + ++ +E+ QL +++
Sbjct: 64 AIRNANDGISLIQTAEGALDETTNILQRMRELSIQSANGTYDEGNRGTLNAEVQQLVAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FNG N L LG+ + + + + +
Sbjct: 124 DRISETTKFNGLNILDGTLGNVDLQAGADANETIALEIGALDSRSIGGSGGTIIGEAVTA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G + + ++ + L +
Sbjct: 184 IGVLETITGATGTGALTINDQAISSLTGEAILQDQLDSINADINDYGAEVSTLVEWESAG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + V+A+
Sbjct: 244 VGDGVLVAGTDEVTITVTNNFEDATSFVITDTQNMDDLVSKINDVAGGTVQASVNQDGKL 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
N+ V +T VD + + + + + A
Sbjct: 304 ILRAENAGSIAVADTAGRVDEAFGLSAGTTTDTQFFSLVVNDTSADQSGVKIEQAGTGAS 363
Query: 360 AMEEMVSFI 368
A ++ I
Sbjct: 364 AAYDIADNI 372
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 44/330 (13%), Positives = 98/330 (29%)
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I + + D+ T + + G I I D + S+
Sbjct: 272 ITDTQNMDDLVSKINDVAGGTVQASVNQDGKLILRAENAGSIAVADTAGRVDEAFGLSAG 331
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
T+ + + +K ++ + + + +
Sbjct: 332 TTTDTQFFSLVVNDTSADQSGVKIEQAGTGASAAYDIADNIGIDLSDDNGNLLSQSLSGT 391
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A T T G+ +A SD ++ +
Sbjct: 392 ADLSGTTVQAGDLIINGVEIGEITGGTTEALTVDAAVEAINKMSDQTGVVAFESDTSGAG 451
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
G + + ++ S +++ + + +
Sbjct: 452 GVSGIGLRSASGDEIAIEYASDLNSTQETAILNLTGLQERNASEGAGSVASIDISTAAGA 511
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ + ID+ ++ A G +G+I++R+ + + + + V R+ DAD A+ES
Sbjct: 512 QKAIGIIDSALEEINATRGDLGAINNRLDFTINNLSNVSENVAAARSRIEDADFAAESAA 571
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
LS Q QQ L+ N + ++LSL +
Sbjct: 572 LSRAQVLQQAGTAMLAQANAAPQQVLSLLQ 601
>gi|304310893|ref|YP_003810491.1| Flagellin [gamma proteobacterium HdN1]
gi|301796626|emb|CBL44838.1| Flagellin [gamma proteobacterium HdN1]
Length = 553
Score = 135 bits (338), Expect = 2e-29, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 3/162 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L L R+SSGLR++ A D+AA +I+ + L+
Sbjct: 5 INTNISSINAQRNLNKSQGALATSLQRLSSGLRINSAKDDAAGLAISNRFTTQVRGLNVA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
G S ++ + + + +++ D KS+Q E+ QL ++
Sbjct: 65 IRNANDGISFAQTTESALDEISVALQRMRDLGVQSANDTNSESDRKSLQEEVAQLVLEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
IA+ ++FN L + I + + +
Sbjct: 125 RIAKTTTFNNRPVLDGSNTQVSFQIGANANQTVSVEGVDARS 166
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/272 (10%), Positives = 68/272 (25%)
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
+ D ++ + I+ A
Sbjct: 270 ASMQGVYASAKTVFRGSDVQAGDYAGAQADANIPTNVGQGTLKNGDLKINGVDIGPAEFM 329
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
+ AK T T+ S + +
Sbjct: 330 VNDSSQSLTRAINAKSDVTGVTAAIDRNGELVLTAEDGRDIVISTGSGEINNYLFGGGYN 389
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR 348
T++ T + T ++ + + +
Sbjct: 390 TTGNNHFDNTANFDNLRVTGRLTVTGTDTLSFSGTGNEALGLDATGLAADGAENNTQAIG 449
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
+ +++ +D+ + + G +G++ +R + + +++
Sbjct: 450 TIASADITTIDGANRLITSVDSALDQINSMRGALGAVQNRFESTIRNLSSVSESLSAANS 509
Query: 409 RLVDADMASESTRLSALQTQQQLAVQALSIVN 440
R++DAD A+E+ LS Q QQ + LS N
Sbjct: 510 RILDADFAAETASLSKNQVLQQAGISVLSQAN 541
>gi|73666233|gb|AAZ79793.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Newport]
gi|73666283|gb|AAZ79818.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Braenderup]
gi|73666285|gb|AAZ79819.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Braenderup]
gi|73666287|gb|AAZ79820.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Braenderup]
Length = 434
Score = 135 bits (338), Expect = 2e-29, Method: Composition-based stats.
Identities = 60/433 (13%), Positives = 124/433 (28%), Gaps = 50/433 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSF--------------------------------IRDDNGKVQITTIDYYLDPET 174
+G +T D
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKAYDVSATAAMDPKSFTDGTKNLTAPDATAIKAA 180
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ ++T + L ++ K + + + ++ A T A
Sbjct: 181 LGNPAATGDSLSATLSFKDGKYYATVAGYTNAADTSKNGKYEVNVDSATGAVTFNAAPTK 240
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A T D + P+ + S + + AA + + +
Sbjct: 241 ATVTGDTTVTKVQVNAPVAVSTDVKKALEDGGVSNADATAAKLVKMSYTDKNGKSIDGGY 300
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK---------------EIDSGY 339
Y + G V T + + + K
Sbjct: 301 ALEAGGKYYAATYDEGTGKITANVTTYTDSTGATKTAANQLGGVDGKTEVVTIDGKTYNA 360
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
S + + A E ++ ID + A +G++ +R + +
Sbjct: 361 SKAAGHDFKAQPELAEAAAKTTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITNLGNT 420
Query: 400 RDAVEKGVGRLVD 412
+ + + R+ D
Sbjct: 421 VNNLSEARSRIED 433
>gi|59712472|ref|YP_205248.1| flagellin [Vibrio fischeri ES114]
gi|46394805|gb|AAS91570.1| flagellin subunit B [Vibrio fischeri ES114]
gi|59480573|gb|AAW86360.1| Flagellin FlaB [Vibrio fischeri ES114]
Length = 377
Score = 135 bits (338), Expect = 2e-29, Method: Composition-based stats.
Identities = 43/203 (21%), Positives = 75/203 (36%), Gaps = 3/203 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L +L +R+SSG R++ A D+AA I+ +KS L
Sbjct: 4 TVNTNVSAMTAQRYLNQATEHLNQSMERLSSGKRINSAKDDAAGLQISNRLKSQMSGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQL 119
G S A+ M+++ +++ +++ D ++IQ E L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNESTNILQRMRDLALQSSNGSNTLQDRQAIQEEADALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ST I + + T + +
Sbjct: 124 NRIAETTSFGGRRLLNGQFGTSTFQIGANAGEAVQLTLGSMRSDTLAMGGFHYTSQNQLN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQV 202
G +
Sbjct: 184 KGWTVPEGGQTLTMSFNDKNGKA 206
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 33/362 (9%), Positives = 83/362 (22%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N+ T + + + S I + + + + +
Sbjct: 15 QRYLNQATEHLNQSMERLSSGKRINSAKDDAAGLQISNRLKSQMSGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + + ++ D D +
Sbjct: 75 AQTAEGAMNESTNILQRMRDLALQSSNGSNTLQDRQAIQEEADALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
++ A A + + T +
Sbjct: 135 RRLLNGQFGTSTFQIGANAGEAVQLTLGSMRSDTLAMGGFHYTSQNQLNKGWTVPEGGQT 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ S + + + T G ++ A V + L S
Sbjct: 195 LTMSFNDKNGKAQEITIEAKAGDDIEELATYINGQNDTVQASVDENGQLQLFTAGDLVSS 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
S + + N + ++ +D + +G+ +R
Sbjct: 255 AVTFGGSLSAELAIGGAVFDTVNDLDLTSVGGSQRAIATLDAAMGFVDKERATLGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+ + Q QQ++ L+ + L
Sbjct: 315 FDHAINNLNNIHENVAASNSRIEDTDFAKETVEMMKAQILQQVSSTVLAQAKQAPDIALK 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|260767715|ref|ZP_05876650.1| flagellin B [Vibrio furnissii CIP 102972]
gi|260617224|gb|EEX42408.1| flagellin B [Vibrio furnissii CIP 102972]
gi|315179453|gb|ADT86367.1| flagellin [Vibrio furnissii NCTC 11218]
Length = 376
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 79/221 (35%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L ++ +R+SSG R++ A D+AA I+ + S + L
Sbjct: 4 NVSTNVSAMTAQRYLNGAADGVQKSMERLSSGYRINSAKDDAAGLQISNRLTSQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
G S A+ M+++ +++ +++ +IQ E++ L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNESTNILQRMRDLALQSSNGSNSRSERVAIQEEVSALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L GS + I + +
Sbjct: 124 NRIAETTSFGGNKLLNGTFGSKSFQIGADSGEAVNLTMGNMRSDNAAMGGKSYRAQEGKA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ L N+ K I D ++T
Sbjct: 184 ADWTVGDAKDLTLNYTDKQGEARELTITAKSGDDLEEVATY 224
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/375 (11%), Positives = 92/375 (24%), Gaps = 12/375 (3%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
A+ ++ A D + ++ + + + S
Sbjct: 13 TAQRYLNGAADGVQKSMERL-----SSGYRINSAKDDAAGLQISNRLTSQSRGLDMAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A A+ + + + +
Sbjct: 68 ANDGISIAQTAEGAMNESTNILQRMRDLALQSSNGSNSRSERVAIQEEVSALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ + S I + + +++ NA A
Sbjct: 128 ETTSFGGNKLLNGTFGSKSFQIGADSGEAVNLTMGNMRSDNAAMGGKSYRAQEGKAADWT 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
+ K + G+ + T G ++ A VG
Sbjct: 188 VGDAKDLTLNYTDKQGEARELTITAKSGD-------DLEEVATYINGQSDDVKASVGEDG 240
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
S+ + +E V+ +D +K
Sbjct: 241 KLQLFASSQKVTGDVTIGGDLGSEIGFGAAQEVTVKDIDVTSVAGSQEAVAVLDGALKSV 300
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ +G+ +R + + + V R+ D D A E+T ++ Q QQ +
Sbjct: 301 DSQRASLGAFQNRFGHAISNLDNINENVNASRSRIKDTDYARETTAMTKSQILQQASTSV 360
Query: 436 LSIVNNSTARILSLF 450
L+ S + LSL
Sbjct: 361 LAQAKQSPSAALSLL 375
>gi|91225882|ref|ZP_01260851.1| flagellin [Vibrio alginolyticus 12G01]
gi|91189532|gb|EAS75808.1| flagellin [Vibrio alginolyticus 12G01]
Length = 377
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 47/365 (12%), Positives = 114/365 (31%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQAESGKG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + Q + + T +
Sbjct: 184 KDWNVAQGKNDLKINLTDSYGQEQEINISAKAGDDIEELATYINGQTDLVKASVDQDGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + G K T + + + + S
Sbjct: 244 QIFAGNNKVEGEVEFSGGLSGELGLGEGKKVTVDTIDVTSVGGAQESVAIIDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D + ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTAMTKSQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/362 (10%), Positives = 90/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S + + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + K + + + +
Sbjct: 135 NKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQAESGKGKDWNVAQGKND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
++ S + N + T G T+ A V
Sbjct: 195 LKINLTDSYGQEQEINISAKAGDDIEELATYINGQTDLVKASVDQDGKLQIFAGNNKVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ SG + +T +E V+ ID +K + ++G+ +R
Sbjct: 255 EVEFSGGLSGELGLGEGKKVTVDTIDVTSVGGAQESVAIIDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T ++ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTAMTKSQILSQASSSILAQAKQAPNSALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|156975442|ref|YP_001446349.1| flagellin [Vibrio harveyi ATCC BAA-1116]
gi|156527036|gb|ABU72122.1| hypothetical protein VIBHAR_03173 [Vibrio harveyi ATCC BAA-1116]
Length = 377
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 48/365 (13%), Positives = 113/365 (30%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTYGTQSFQIGADNGEAVMLNLKDMRSDNQMMGGVSYQADNGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
E + Q + + T +
Sbjct: 184 KNWNVEAGKNDLKISLTDSFGQEQEINISAKAGDDIEELATYINGQTDLVKASVDQDGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + G K T + + + + S
Sbjct: 244 QVFAGNNKVEGDVEFSGGLSGELGLNDGKKVTVDTIDVTSVGGAQESVAIIDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D + ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/362 (10%), Positives = 88/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S + + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + + +
Sbjct: 135 NKLLNGTYGTQSFQIGADNGEAVMLNLKDMRSDNQMMGGVSYQADNGKDKNWNVEAGKND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
S+ S + N + T G T+ A V
Sbjct: 195 LKISLTDSFGQEQEINISAKAGDDIEELATYINGQTDLVKASVDQDGKLQVFAGNNKVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
SG + +T +E V+ ID +K + ++G+ +R
Sbjct: 255 DVEFSGGLSGELGLNDGKKVTVDTIDVTSVGGAQESVAIIDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T+++ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILAQAKQAPNSALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|73666237|gb|AAZ79795.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Newport]
Length = 434
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 60/433 (13%), Positives = 124/433 (28%), Gaps = 50/433 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGA 120
Query: 147 KSVIGSF--------------------------------IRDDNGKVQITTIDYYLDPET 174
+G +T D
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKAYDVSATAAMDPKSFTDGTKNLTAPDATAIKAA 180
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ ++T + L ++ K + + + ++ A T A
Sbjct: 181 LGNPAATGDSLSATLSFKDGKYYATVAGYTNAADTSKNGKYEVNVDSATGAVTFNAAPTK 240
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A T D + P+ + S + + AA + + +
Sbjct: 241 ATVTGDTTVTKVQVNAPVAVSTDVKKALEDGGVSNADATAAKLVKMSYTDKNGKSIDGGY 300
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK---------------EIDSGY 339
Y + G V T + + + K
Sbjct: 301 ALEAGGKYYAATYDEGTGKITANVTTYTDSTGATKTAANQLGGVDGKTEVVTIDGKTYNA 360
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
S + + A E ++ ID + A +G++ +R + +
Sbjct: 361 SKAAGHDXKAQPELAEAAAKTTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITNLGNT 420
Query: 400 RDAVEKGVGRLVD 412
+ + + R+ D
Sbjct: 421 VNNLSEARSRIED 433
>gi|328473444|gb|EGF44292.1| flagellin [Vibrio parahaemolyticus 10329]
Length = 378
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 74/187 (39%), Gaps = 3/187 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQAESGKG 183
Query: 180 STDGTER 186
+
Sbjct: 184 KDWNVAQ 190
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 39/363 (10%), Positives = 91/363 (25%), Gaps = 1/363 (0%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S + + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + K + + + +
Sbjct: 135 NKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQAESGKGKDWNVAQGKND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
S+ S + N + + T G + A V
Sbjct: 195 LKISLTDSFGQEQEININAKAGDDIEELATYINGKPDLVKASVDQDGKLQIFAGNNKVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITR-HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+ SG + N +T +E V+ ID +K + ++G+ +
Sbjct: 255 EVSFSGGLSGELGLGDNKKNVTVDTIDVTSVGGAQESVAIIDAALKYVDSHRAELGAFQN 314
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
R + + + + V R+ D D A E+T ++ Q Q + L+ + L
Sbjct: 315 RFNHAISNLDNINENVNASKSRIKDTDFAKETTAMTKSQILSQASSSILAQAKQAPNSAL 374
Query: 448 SLF 450
SL
Sbjct: 375 SLL 377
>gi|153834130|ref|ZP_01986797.1| polar flagellin [Vibrio harveyi HY01]
gi|153834460|ref|ZP_01987127.1| polar flagellin [Vibrio harveyi HY01]
gi|148869156|gb|EDL68188.1| polar flagellin [Vibrio harveyi HY01]
gi|148869500|gb|EDL68498.1| polar flagellin [Vibrio harveyi HY01]
Length = 377
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 47/365 (12%), Positives = 114/365 (31%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTYGTQSFQIGADNGEAVMLNLKDMRSDNQMMGGVSYQAENGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
E + Q + + T +
Sbjct: 184 KNWNVEEGKNDLKISLTDSFGQEQEINISAKAGDDIEELATYINGQTDLVKASVDQDGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + + G+ T + + + + S
Sbjct: 244 QVFAGNNKVEGDVEFSGGLSGELGLSDGNNVTVDTIDVTSVGGAQESVAIIDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D + ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/362 (10%), Positives = 89/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S + + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + + +
Sbjct: 135 NKLLNGTYGTQSFQIGADNGEAVMLNLKDMRSDNQMMGGVSYQAENGKDKNWNVEEGKND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
S+ S + N + T G T+ A V
Sbjct: 195 LKISLTDSFGQEQEINISAKAGDDIEELATYINGQTDLVKASVDQDGKLQVFAGNNKVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
SG ++ +T +E V+ ID +K + ++G+ +R
Sbjct: 255 DVEFSGGLSGELGLSDGNNVTVDTIDVTSVGGAQESVAIIDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T+++ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILAQAKQAPNSALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|114764026|ref|ZP_01443267.1| flagellin protein [Pelagibaca bermudensis HTCC2601]
gi|114543618|gb|EAU46632.1| flagellin protein [Roseovarius sp. HTCC2601]
Length = 432
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 111/451 (24%), Positives = 182/451 (40%), Gaps = 19/451 (4%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN SA A L+ IN ++ VQ +++G RV+ A DNAA W+IA+ M++D
Sbjct: 1 MSSILTNDSATIALMTLQSINTSIAEVQTEIATGRRVAGAEDNAAVWAIAKTMEADVLGY 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
V+D++ LG + + +A+ G ++++ IK ++ E D IQ+ ++ L+ Q+
Sbjct: 61 RKVADSLALGGATLAVARKGAETITELLTEIKGQVVTAQEENVDRAKIQNTVSSLRDQIG 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + FNG N L T S +++V+G RD G + D T + +
Sbjct: 121 AVVETAQFNGLNLLNNRDT-GTGSGSEAVLGFLQRDSLGVRGVDISIGKQDLSTARREIT 179
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G G L ++V + S T
Sbjct: 180 ASGGTYSGSEVSATLTLTRSATLDASALTVTAGMAFSLSLYGTDGDGSTFVQADLRTTSG 239
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ A + + A G S+ AS +S + + +S+
Sbjct: 240 ATQSRAEMASAPISYVARDGDGIGDVLSQLSQRYASYAARSGIDSSVLQVQASGSSLDIS 299
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T ++ T+ +L +
Sbjct: 300 SEVTTASDTIAVKIDTLSADAGNTIGGGLELLAD------------------LDVTTADG 341
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ++ I+ + +T AA GS R+ Q F + DA+ G+G LVDAD+ S
Sbjct: 342 ANDALATIEGLLDISTNAAAAFGSDQRRLETQTRFNDRLTDAMTSGIGVLVDADLEESSA 401
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQ QQQLA+QA+SI N + +LSLFR
Sbjct: 402 RLQALQVQQQLAIQAMSIANGAPGVLLSLFR 432
>gi|322435024|ref|YP_004217236.1| flagellin domain protein [Acidobacterium sp. MP5ACTX9]
gi|321162751|gb|ADW68456.1| flagellin domain protein [Acidobacterium sp. MP5ACTX9]
Length = 408
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 53/451 (11%), Positives = 132/451 (29%), Gaps = 50/451 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+L N +A+ A L + +L+ ++SSG R++ +D+AA ++A + ++ AL+
Sbjct: 5 VLNNIAAIYAQNNLNNTQASLQNTLTQLSSGSRINSGSDDAAGLAVADGLAANESALTQS 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLR 120
+ G + A +S+ ++++ T +S S E + S++
Sbjct: 65 AANASDGIGLLQTADGALSQVTNLLNRAVTLSTEAANGTLNSNQVSSANQEYQNILSEIG 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I ++FNG + + + S + D G + + + ++
Sbjct: 125 NIGVTTNFNGRSVFTSTAKTVFVSDGTVSGANVYSDVVGTLAKGGVGETAPVGAGIAITN 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + ++ A GT T A +
Sbjct: 185 PTPTASTLTAGSVATFGALAATTDSVGGTISVAVGTGGTAVVSTIAKGTALSDVVSQLNA 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
Q + T + + + +T + D
Sbjct: 245 QYNAANNGVTASLVSGKLTITGPQDAANTTAGTNTLVVTGTALTDYAQATSTAGPAAGID 304
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+T + +
Sbjct: 305 FTQ-----------------------------------------------STVSTLTQAT 317
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ +++ + + I G IG+ +++ + + + + + ++
Sbjct: 318 AQTVLTTVTSAIAAVAYQRGIIGADVNQLTAASGVASTESENLTAAESNIRETNYGQATS 377
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ + Q + AL+ N+ +L L +
Sbjct: 378 DLAKYEVLSQTGISALAQANSVQQEVLKLLQ 408
>gi|83589612|ref|YP_429621.1| flagellin-like [Moorella thermoacetica ATCC 39073]
gi|83572526|gb|ABC19078.1| Flagellin-like protein [Moorella thermoacetica ATCC 39073]
Length = 380
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 3/174 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + L N L +++SSGLR++ AAD+AA +I++ M+ L+
Sbjct: 3 INQNISALNAYRNLTVTNNALTKSMEKLSSGLRINRAADDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ D IQ EI QL +L
Sbjct: 63 VRNAQDGISLIQTAEGALNETHSILQRMRELAVQSANDTNTAADRWEIQKEINQLSEELT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
IA + FN +N L + + A ++ K +
Sbjct: 123 RIANTTEFNTKNLLGGNFEGTFQIGANKDQNITLQIGGMKSSDLKTEVSGYAAA 176
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 45/137 (32%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ S + +V + + + + + ++ I+ I+
Sbjct: 244 TAKNGSYSIDFTWSGTAVAGTSAKLYIVGKDENGNNQGISVITQADANKAITTINNAIET 303
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+A K+G+ +R+ + + + R+ D DMA E + Q Q
Sbjct: 304 VSAERSKLGAYQNRLEHTIANLGTAAENLTAAESRIRDLDMAQEMMAFTRNQILSQAGTA 363
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +L L R
Sbjct: 364 MLAQANAQPQTVLQLLR 380
>gi|261253606|ref|ZP_05946179.1| flagellin protein FlaC [Vibrio orientalis CIP 102891]
gi|260936997|gb|EEX92986.1| flagellin protein FlaC [Vibrio orientalis CIP 102891]
Length = 381
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 74/186 (39%), Gaps = 3/186 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L +L +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 TVNTNVSAMTAQRYLNKATGDLNTSMERLSSGQQINSAKDDAAGLQISNRLTAQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M+++ ++ I++ ++ +++ E+ LQ +L
Sbjct: 64 AMRNANDGISIAQTAEGAMNESTSILQRIRDLSLQSANGTNSASERQALHEEVAALQDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G ++ I S + I + ++
Sbjct: 124 NRIAETTSFGGRKLLNGSFGEASFQIGASSGEAIIMGLTSVRADDFRMGGQSFISAPENA 183
Query: 180 STDGTE 185
Sbjct: 184 KDKDWG 189
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 40/105 (38%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
N + V +D +K + +G+ +R+ + + +++ VE
Sbjct: 277 NTTVQNIDVNTVGGAQNAVGIVDAALKYVDSQRADLGAKQNRLSHSINNLANIQENVEAS 336
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D D A E+T ++ Q QQ L+ ++L +
Sbjct: 337 NSRIRDTDFAKETTAMTKAQILQQAGTSILAQAKQLPNSAMTLLQ 381
>gi|153841543|ref|ZP_01993414.1| polar flagellin B/D [Vibrio parahaemolyticus AQ3810]
gi|149745469|gb|EDM56720.1| polar flagellin B/D [Vibrio parahaemolyticus AQ3810]
Length = 367
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 74/187 (39%), Gaps = 3/187 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQAESGKG 183
Query: 180 STDGTER 186
+
Sbjct: 184 KDWNVAQ 190
Score = 76.3 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 43/371 (11%), Positives = 89/371 (23%), Gaps = 12/371 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++ A T ++ + + +
Sbjct: 4 NVNTNVSAM-TAQRYLNNANSAQQTSMERL-----SSGFKINSAKDDAAGLQISNRLNVQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + ++ + +
Sbjct: 58 SRGLDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVT 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ + S I + +++ N
Sbjct: 118 ALNDELNRIAETTSFGGNKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQ 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A A S + S DI AT N T +
Sbjct: 178 AESGKGKDWNVAQGKNDLKISLTDSFGQEQEININAKAGDDIEELATYINGQTDLVKASV 237
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
K+ E + + +T +E V
Sbjct: 238 DQDGKLQIFAGNNKVEGEVS-----FSGGLSGELGLGDDKKNVTVDTIDVTSVGGAQESV 292
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ ID +K + ++G+ +R + + + + V R+ D D A E+T
Sbjct: 293 AIIDAALKYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTH-DQS 351
Query: 426 QTQQQLAVQAL 436
Q Q + +L
Sbjct: 352 QILSQASSSSL 362
>gi|150020437|ref|YP_001305791.1| flagellin domain-containing protein [Thermosipho melanesiensis
BI429]
gi|149792958|gb|ABR30406.1| flagellin domain protein [Thermosipho melanesiensis BI429]
Length = 387
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + + N ++ +R+SSGLR++ A D+AA +I++ M+ ++
Sbjct: 3 INHNISALNAWRSIGQTNMSMSKTLERLSSGLRINRAGDDAAGLAISEKMRGQIKGINMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ D IQ+E+ QL+ ++
Sbjct: 63 IKNSQDAISLIQTAEGALTEVHSILQRMRELAVQASSDTNTDVDRNQIQAELDQLREEID 122
Query: 121 DIARGSSFNGENWLRT 136
IAR + FN + L
Sbjct: 123 RIARTTEFNTKKLLDG 138
Score = 117 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 41/97 (42%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ A E+ + +D I ++ +G++ +R+ + + + + R+ DAD
Sbjct: 291 VTTQDAAEKAIMVVDAAIHKVSSQRAALGAVQNRLEHTIANLGVAAENLTAAESRVRDAD 350
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + Q Q ++ L+ N +L L R
Sbjct: 351 MAKEMMEFTKQQILLQSSMGMLAQANAQPQNVLQLLR 387
>gi|307701397|ref|ZP_07638417.1| flagellin protein [Mobiluncus mulieris FB024-16]
gi|307613412|gb|EFN92661.1| flagellin protein [Mobiluncus mulieris FB024-16]
Length = 552
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 46/121 (38%)
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
++ N T N + A + ++ +D +I+ + A +G+I +R
Sbjct: 432 GDTDLGWDIEGKEENKTVTYNDLDVSSHDAAQNLIKVLDRKIQSVSTARANLGAIQNRFE 491
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + + R+ D DMA E + + Q Q L+ N +LSL
Sbjct: 492 HTITNLNVAVENLAASESRIRDTDMAQEMMQFTRNQILSQAGTSMLAQANQVPQGVLSLL 551
Query: 451 R 451
R
Sbjct: 552 R 552
Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 24 LEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSK 83
L +++SSG R++ AAD+AA +I++ ++S G S + A+ +++
Sbjct: 42 LAKSLEKLSSGFRINRAADDAAGLAISEGLRSQVRGNRQAVRNAQDGISVIQTAEGALNE 101
Query: 84 AIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGS 140
++ ++ G ++ +E+ QL+ +L+ I ++FNG L
Sbjct: 102 VHSILQRMRTLAVQGANDSNSPEARNNVHTELVQLRDELQRIGHVTNFNGRKLLDGTASG 161
Query: 141 STA 143
+ A
Sbjct: 162 NNA 164
>gi|312882649|ref|ZP_07742386.1| flagellin [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369610|gb|EFP97125.1| flagellin [Vibrio caribbenthicus ATCC BAA-2122]
Length = 380
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 39/227 (17%), Positives = 74/227 (32%), Gaps = 3/227 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + + +R+SSG +++ A D+AA I+ ++ + L
Sbjct: 4 NVNTNVSAMTAQRYLNSASAAQQTSMERLSSGFKINSAKDDAAGLQISNRLQVQSRGLGV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S ++ M++ ++ +++ + +IQ EIT L +L
Sbjct: 64 AVRNANDGISIAQTSEGAMNETTTILQRMRDLSLQSANGSNSLSERTAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ I + + N
Sbjct: 124 NRIAETTSFGGNKLLNGTFGTKAFQIGADSGEAVMFTLNNMRSDNKFMGGGTYAAGDAKG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
E + V + + T
Sbjct: 184 KDWAVEDTKNELILDIKDLNGVVEQVKIEAKVGDDIEEVATYINGQT 230
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/385 (10%), Positives = 100/385 (25%), Gaps = 9/385 (2%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++ A T ++ + + +
Sbjct: 4 NVNTNVSAM-TAQRYLNSASAAQQTSMERL-----SSGFKINSAKDDAAGLQISNRLQVQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S G + G S A ++ + ++ + +
Sbjct: 58 SRGLGVAVRNANDGISIAQTSEGAMNETTTILQRMRDLSLQSANGSNSLSERTAIQEEIT 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ + + I + + +++ N
Sbjct: 118 ALNDELNRIAETTSFGGNKLLNGTFGTKAFQIGADSGEAVMFTLNNMRSDNKFMGGG--- 174
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A T + +++ I
Sbjct: 175 TYAAGDAKGKDWAVEDTKNELILDIKDLNGVVEQVKIEAKVGDDIEEVATYINGQTDKVK 234
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
++VA+ G + D T + + + ++ +T +E V
Sbjct: 235 ASVAEGGVLQLFTDNNKVTDAEAIGISGTLATELNLTNTRKAVTVDTIDVKTVGGAQESV 294
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ +D ++ + +IG+ +R ++ + + V R+ D D A E+T L+
Sbjct: 295 AIVDAALRFVDSHRAEIGAFQNRFGHAISNLENIDENVNASKSRIKDTDFAKETTALTKA 354
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q Q + L+ + L L
Sbjct: 355 QILTQASSSVLAQAKQAPNSALGLL 379
>gi|260767716|ref|ZP_05876651.1| flagellin protein FlaD [Vibrio furnissii CIP 102972]
gi|260617225|gb|EEX42409.1| flagellin protein FlaD [Vibrio furnissii CIP 102972]
gi|315179452|gb|ADT86366.1| polar flagellin [Vibrio furnissii NCTC 11218]
Length = 377
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 45/357 (12%), Positives = 105/357 (29%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNSASNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSSNGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTFQTKSFQIGADNGEAVMLSLKDMRSDNRMMGGSSYQAENAKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
E+ + + T
Sbjct: 184 KNWSVEQGKNDLTITLNDDKGNEQSININAKAGDDIEELATYINGQTDMVKASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + G + T + + + + S
Sbjct: 244 QVFAGNNKVSGEVSFSGGLAGELGMKEGKEVTVDKIDVTSVGGAQESVAIVDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D + +++ K K+ D L ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSS 360
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/362 (9%), Positives = 92/362 (25%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNSASNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + + +S + + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSSNGSNSKAERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + + + A +
Sbjct: 135 NKLLNGTFQTKSFQIGADNGEAVMLSLKDMRSDNRMMGGSSYQAENAKDKNWSVEQGKND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + N + + T G T+ A V S
Sbjct: 195 LTITLNDDKGNEQSININAKAGDDIEELATYINGQTDMVKASVNEKGQLQVFAGNNKVSG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ +G + + +E V+ +D +K + ++G+ +R
Sbjct: 255 EVSFSGGLAGELGMKEGKEVTVDKIDVTSVGGAQESVAIVDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T L+ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPQAALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|88858133|ref|ZP_01132775.1| flagellin [Pseudoalteromonas tunicata D2]
gi|88819750|gb|EAR29563.1| flagellin [Pseudoalteromonas tunicata D2]
Length = 586
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 81/222 (36%), Gaps = 3/222 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++A + L + +E R+SSGLR++ A D+AA I+ + S L+
Sbjct: 3 LTVQTNPTSLNAQRNLSKASSGMETSMQRLSSGLRINSAKDDAAGMQISNKLTSQINGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQ 118
+ G S A+ + ++ +++ +++ D ++Q E+TQL+ +
Sbjct: 63 VATRNANDGISMAQTAEGALQESSNILQRMRDLSVQASNGTYSDADRGALQEEVTQLKRE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA +SF L G+ + + + +
Sbjct: 123 LDRIASSTSFGDRKLLDGSFGTEQFQVGAKSFETINVSVGSFFGEDMGAETYELKNYTDA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
++ + + + V + + +
Sbjct: 183 NAAVIAGSVNVGVTSSGLTGGVLTAATGLVGFGNFISSGTAG 224
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 45/126 (35%)
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
D+ + + +++ T N L ++ + ID + +G+
Sbjct: 460 TDTAGTAGVLHGNTAADSSISGTETVNDINIGTALGAQKAIEVIDGALSYIDTQRANMGA 519
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
+ +R+ + + + R+ D D A+E+ L+ Q QQ L+ N
Sbjct: 520 VQNRLSTTVSNLSNVVENASASRSRIRDTDFATETAELTKNQILQQAGTSILAQANQLPQ 579
Query: 445 RILSLF 450
LSL
Sbjct: 580 TALSLL 585
>gi|323498412|ref|ZP_08103408.1| flagellin [Vibrio sinaloensis DSM 21326]
gi|323316485|gb|EGA69500.1| flagellin [Vibrio sinaloensis DSM 21326]
Length = 379
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 72/183 (39%), Gaps = 3/183 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L +L +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 TVNTNVSAMTAQRYLNKATGDLNTSMERLSSGQQINSAKDDAAGLQISNRLTAQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M+++ ++ +++ ++ +I E++ LQ +L
Sbjct: 64 AMRNANDGISIAQTAEGAMNESTAILQRMRDLSLQSANGTNSDSERTAINEEVSALQDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G ++ I S + I +
Sbjct: 124 NRIAETTSFGGRKLLNGTFGEASFQIGASSGEAIIMGLTSIRADDFRMGGQSFISEQGKG 183
Query: 180 STD 182
Sbjct: 184 KDW 186
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 32/365 (8%), Positives = 84/365 (23%), Gaps = 2/365 (0%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQL--RDIARGSSFNGENWLRTDLGSSTASIA 146
NK T + + S +I + I+ + ++
Sbjct: 15 QRYLNKATGDLNTSMERLSSGQQINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISI 74
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + +Q DS ++ ++
Sbjct: 75 AQTAEGAMNESTAILQRMRDLSLQSANGTNSDSERTAINEEVSALQDELNRIAETTSFGG 134
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ G S + + + + D G + +
Sbjct: 135 RKLLNGTFGEASFQIGASSGEAIIMGLTSIRADDFRMGGQSFISEQGKGKDWGVPANARD 194
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + + +++
Sbjct: 195 LKLEFTGKDGDLVTIDILAKDGDDIEELATYINGQTDLVKASVDQEGKLQIFASQAELKS 254
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + + V ID+ ++ + +G+
Sbjct: 255 DLSISGGLAGELGLNGGPGVQTTVQSIDVRSVGGAQNAVGIIDSALQYVDSQRADLGAKQ 314
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R+ + + +++ VE R+ D D A E+T ++ Q QQ L+
Sbjct: 315 NRLSHSINNLANIQENVEASNSRIRDTDFAKETTAMTKAQILQQAGTSILAQAKQLPNSA 374
Query: 447 LSLFR 451
+SL +
Sbjct: 375 MSLLQ 379
>gi|15214018|sp|Q56826|FLIC_XENNE RecName: Full=Flagellin
gi|1136224|emb|CAA62509.1| flagellin [Xenorhabdus nematophila]
Length = 313
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 3/155 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I TN SA+ A L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 3 SVINTNDSALLAQNNLTKSKGILGSAIERLSSGLRINSAKDDAAGQAIANRFTANVKGLT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQ 118
+ G S + +++ + + I+ SIQ E+TQ +
Sbjct: 63 QAARNANDGISIAQTTEGALNEINNNLQRIRELTVQSENGSNSKSDLDSIQKEVTQRLEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+ I+ + FNG L D+ + + +
Sbjct: 123 IDRISTQTQFNGIKVLNGDVTEMKIQVGANDNETI 157
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 36/89 (40%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ +D + +G++ +R+ + + + + R+ DAD A E + +
Sbjct: 225 NPLDTLDKALAQVDDMRSSLGAVQNRLESTVNNLNNTVNNLSAARSRIEDADYAVEVSNM 284
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q QQ L+ N +LSL R
Sbjct: 285 SRGQILQQAGTSVLAQANQVPQTVLSLLR 313
>gi|89895768|ref|YP_519255.1| hypothetical protein DSY3022 [Desulfitobacterium hafniense Y51]
gi|89335216|dbj|BAE84811.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 389
Score = 134 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 65/447 (14%), Positives = 121/447 (27%), Gaps = 61/447 (13%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
SA++ ++L N +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 1 MSAINTYRQLTVNNAGTSKSLEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQAGRNA 60
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIAR 124
S + A+ +++ ++ ++ TD IQ EI QL ++ IA
Sbjct: 61 QDSISLIQTAEGALNETHSILQRMRELAVQAANDTNSSTDRGEIQKEIKQLTDEIDRIAN 120
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ FN + L D V N + + ++L
Sbjct: 121 TTEFNTQKLLNGDKKGLVDKEESQVTLQLNTKANITLGASVSTNIGQSGVIILTKGDVSV 180
Query: 185 ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKG 244
E L N V + + T + +
Sbjct: 181 EGNNPLSGNTSFSVYIAGEVGTISVSGNTITIAANGSKLGGTIELSGSLDDLKAGESIAI 240
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
V A + G
Sbjct: 241 SIKSAVAESTAIGNS-------------------------------------FSMQIGAN 263
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
+ VG + D + + + ++I +A E+ + +
Sbjct: 264 SGQNIMVGMNSMKASELKLRTGADGDALEVGNYYQATAAVSIINNAIETVSAERSKLGAI 323
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ ++ I ++ + + SRI D DMA E
Sbjct: 324 QNRLEHTINNLGTSSENLTAAESRI---------------------RDVDMAKEMMNFQK 362
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q A L+ N +L L R
Sbjct: 363 NNILSQAAQAMLAQANQQPQGVLQLLR 389
>gi|323495369|ref|ZP_08100446.1| flagellin [Vibrio brasiliensis LMG 20546]
gi|323310292|gb|EGA63479.1| flagellin [Vibrio brasiliensis LMG 20546]
Length = 381
Score = 134 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 74/186 (39%), Gaps = 3/186 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L +L +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 TVNTNVSAMTAQRYLNKATGDLNTSMERLSSGQQINSAKDDAAGLQISNRLTAQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M+++ ++ I++ ++ +++ E++ LQ +L
Sbjct: 64 AMRNANDGISIAQTAEGAMNESTSILQRIRDLSLQSANGTNSASERQALHEEVSALQDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G ++ I S + I + +
Sbjct: 124 NRIAETTSFGGRKLLNGSFGEASFQIGASSGEAIIMGLTSVRADDFRMGGQTFISDAEKA 183
Query: 180 STDGTE 185
Sbjct: 184 KDKDWG 189
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/369 (9%), Positives = 78/369 (21%), Gaps = 8/369 (2%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQL------RDIARGSSFNGENWLRTDLGSST 142
NK T + + S +I + + S + G S
Sbjct: 15 QRYLNKATGDLNTSMERLSSGQQINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISI 74
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A A+ + + + E L D ++I
Sbjct: 75 AQTAE--GAMNESTSILQRIRDLSLQSANGTNSASERQALHEEVSALQDELNRIAETTSF 132
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
++ + F T
Sbjct: 133 GGRKLLNGSFGEASFQIGASSGEAIIMGLTSVRADDFRMGGQTFISDAEKAKDKDWGVPT 192
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ + + + + E
Sbjct: 193 AAKDLKFEFTTKDGEAITLDIIAKEGDDIEELATYINGQTDKFKASVDQDGRLQIFAAEP 252
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKI 382
+ + + V +D +K + +
Sbjct: 253 NLEGNLNISGGLASELGLNGGPGVQTTVQNIDVRSVGGAQNAVGIVDAALKYVDSQRADL 312
Query: 383 GSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNS 442
G+ +R+ + + +++ VE R+ D D A E+T ++ Q QQ L+
Sbjct: 313 GAKQNRLSHSINNLANIQENVEASNSRIRDTDFAKETTAMTKAQILQQAGTSILAQAKQL 372
Query: 443 TARILSLFR 451
++L +
Sbjct: 373 PNSAMTLLQ 381
>gi|242309464|ref|ZP_04808619.1| flagellin b [Helicobacter pullorum MIT 98-5489]
gi|239524035|gb|EEQ63901.1| flagellin b [Helicobacter pullorum MIT 98-5489]
Length = 516
Score = 134 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 77/512 (15%), Positives = 149/512 (29%), Gaps = 64/512 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A N N+ +++SSGLR++ AAD+A+ +IA ++S AL
Sbjct: 5 IYTNVNALNAHTSGLVNNRNMAESLEKLSSGLRINKAADDASGMAIADSLRSQAAALGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + I ++ TIK K T + T ++Q++I +L +L
Sbjct: 65 TRNANDAIGMIQTADKAMDEQIKILDTIKTKATQAAQDGQTTTTRTALQNDILRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I + + ++ S+
Sbjct: 125 NIANTTSFNGQQMLSGAFTNKEFQIGAYSNVTVQASIQPTNSNKIGHVRYETAAEMVVSA 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ L + ++ + +S +G + + + ++A+ +
Sbjct: 185 GADSFGEVSLRFLNTDGTNNYAIETVKISTSAGTGIGALAEAINKNSDTLGVRASYSVIG 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
Q KS S I V+A+ S
Sbjct: 245 QGGTEIASGTIRGLVINGIQIGDINDVQKSDSDGRLIAAINAQKERTGVQASLSISGALQ 304
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T+ V T + I ++ LN + +
Sbjct: 305 LTSTDGRAISVQVTSGSTVLGGGSFAGVSGTTHAIVGRLTLTRLNARDILVSGTGFSNVG 364
Query: 361 MEEMVSFIDT----QIKCAT----------AAAGKIGSISSR------------------ 388
+ + I A IG+ ++
Sbjct: 365 LHSGAANIQAGSGYAQYTVNLRSVKGEFDANIASAIGANANASIAAVNANGIGAGVTSLE 424
Query: 389 ---------------IHLQEDFIKLMRDAVEKGVGRLV--------------DADMASES 419
+ + ++ + + + D D A ES
Sbjct: 425 GAMAVMDMAQSAQEHLDRIRADLGSVQQQLVSTINNITVTQVNVKSAESQIRDTDFAEES 484
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N IL L +
Sbjct: 485 ANFSKTNILAQSGSFAMAQANQVQQNILQLLQ 516
>gi|301629266|ref|XP_002943762.1| PREDICTED: a-type flagellin-like [Xenopus (Silurana) tropicalis]
Length = 523
Score = 134 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 83/187 (44%), Gaps = 3/187 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I TN ++++A + L +L +R+SSGLR++ A D+AA +I++ + ++
Sbjct: 3 STINTNIASLTAQRNLGVSQSSLNTSINRLSSGLRINSAKDDAAGLAISERFTTQIRGMN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S +A+ + + D++ I+ +D +++ +E+ QL ++
Sbjct: 63 QAVRNANDGISLAQVAEGALKSSGDILQRIRELAVQSANATNSASDREALNAEVNQLTAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA+ + FNG L S+ + + + + + +Y + + V
Sbjct: 123 LDRIAKTTEFNGRKLLDGSFTSAQFQVGANAHQTITATSSNFSTNSYGNYRIGGKAVTST 182
Query: 179 SSTDGTE 185
+T
Sbjct: 183 DNTGDLT 189
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 48/144 (33%)
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
G + LD + + T + + + ++
Sbjct: 380 YTITGQLTLDSSKSFSALDDKGAAAGGGFMLANTTTSSQMQAIKDMDVSTVDGANRTLAM 439
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+D I ++ G++ SR + + + + R++DAD A E+ LS Q
Sbjct: 440 VDAAIATISSQRANYGALQSRFESTIANLNISSENMSASRSRILDADFAMETANLSRSQI 499
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
QQ ++ N +LSL +
Sbjct: 500 LQQAGTAMVAQANQIPQGVLSLLK 523
>gi|94265621|ref|ZP_01289364.1| Flagellin-like:transferase hexapeptide repeat:Flagellin hook IN
[delta proteobacterium MLMS-1]
gi|93453862|gb|EAT04223.1| Flagellin-like:transferase hexapeptide repeat:Flagellin hook IN
[delta proteobacterium MLMS-1]
Length = 1558
Score = 134 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 83/205 (40%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +AM+A + NL +R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIAAMNAHNNMLKTGNNLNTSLERLSSGLRINKAADDASGMAIADSLRSQAQGLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
G S V A + ++I++++T+K K + G +IQ++I +L QL
Sbjct: 65 IRNANDGISMVQTADGALEESINIINTVKTKAIQAAQDGQTQESRGAIQADINRLLEQLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IAR ++FN + L + + + + + + +
Sbjct: 125 NIARTTAFNNQKLLSGNFTNQAFQVGAYANETVNISISSSESTKIGHVSNSTLSYNEAGT 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ + + +
Sbjct: 185 AALDIYSSIENSTFSLATVDIAYDN 209
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 41/98 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ++ D +K + +GS +++ I + R + + D D
Sbjct: 1461 VTSQEGAQMAIAIADAALKDLNSVRADLGSTQNQLTSTISNISVTRVNISAAESAIRDVD 1520
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
A ES+ S LQ Q A++ N ++ +LSL +G
Sbjct: 1521 FAEESSNFSRLQILSQAGSFAMAQANATSQNVLSLLQG 1558
>gi|206891026|ref|YP_002249309.1| flagellin [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742964|gb|ACI22021.1| flagellin [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 511
Score = 134 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 68/507 (13%), Positives = 135/507 (26%), Gaps = 59/507 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N A + L + R+S+G R+ AAD+AA IA + + AL
Sbjct: 5 VNFNAEAATTHTALLRNEKAMNKSLLRISTGQRILSAADDAAGLFIADQLATVGAALDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ I G S + IA+ + + D + TI K + ++Q +I L ++
Sbjct: 65 NRNIQTGISALQIAETNVGQIFDKLQTIYTKAQSAANDINDPNARAALQRDIANLVDAIQ 124
Query: 121 DIARGS----------SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL 170
+ + +F + T + + + + +
Sbjct: 125 KLGTDTEYNGIKLLDGTFANKVIHYGARADQTITTSIGNVKATNIGAFVVQGSGQVTSSA 184
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
L + + ++ DA
Sbjct: 185 TSAYTSLIAGDWQYNSASDTVTVAGVNLKNYSALSSVTGAVDAKSIADAINNNATLQGVG 244
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVR 290
A T + I A G+S + + +++ + D V
Sbjct: 245 ISARAVNTSTATTEWSNIDNSSGTAAVTIKFYVGSSTASASAISITVAAGETLTLDELVS 304
Query: 291 ATTKNSITSDPGYTNSTVAKV--------------------------------------- 311
+ T T +
Sbjct: 305 QINTQASTKSLNITATNSGNKLALTTEGETIGLEIASATGAVAVNMAQFLQGATGTVAVG 364
Query: 312 -------GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
T+S D G + + + + E
Sbjct: 365 NTGSAVKVGNLIVTGTDSYNYDFTGISTASAGLGVAATGSGNFYNLYSIDVTDNSGAELA 424
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ ++T IK +IGS+ + + D K D ++ + + D A+E + +
Sbjct: 425 IDIVNTAIKKVDKVRTQIGSVINNLQAIYDGQKTSYDNTKEAENVIRNTDFAAEMSTFTT 484
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
+Q + Q V L+ N +L L R
Sbjct: 485 MQIRMQAGVAMLAQANALPQLVLQLLR 511
>gi|118475571|ref|YP_892764.1| flagellin B [Campylobacter fetus subsp. fetus 82-40]
gi|118414797|gb|ABK83217.1| flagellin B [Campylobacter fetus subsp. fetus 82-40]
Length = 518
Score = 134 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 71/514 (13%), Positives = 141/514 (27%), Gaps = 66/514 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +AM+A N +L ++SSGLR+ AAD+A+ +IA ++S AL
Sbjct: 5 INTNIAAMNAHANAVGNNRDLSGSLGKLSSGLRIQTAADDASGMTIADSLRSQANALGQS 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
V A M + I ++ TIK K + G + +++QS+IT+L +L
Sbjct: 65 IKNGNDAIGIVQTADKAMDEQIKILDTIKTKAVQAAQDGQNADSRRALQSDITRLLEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + I + T + + ++ +
Sbjct: 125 NIANTTAFNGQQLLNGSFSNKNFQIGAYSNETVKVSIGATNSNTIGHTRFETSSNVVYTK 184
Query: 181 T-------------------------------------------DGTERYGLLDRNHKIK 197
K
Sbjct: 185 NLAISGNSGSFAFTLKGIDGIAGGEYKFQAISSGVFASQGLAAVAEQVNAIADKTGVKAS 244
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
V + + V S ++ K + + +A I + +
Sbjct: 245 VNNTQVFNGTKGVGIQSAAVTDLKINGVSIGNIKVSNLDADNVLIGAINKVKEQTGVEAS 304
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
N + ++ + I + + +
Sbjct: 305 KENGKLTLTARDGRAIQINGGNISRLGITQAKGGANVSFLGQISFTRQDARDIIMTFSAT 364
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
+ S I + ++ + +D + +
Sbjct: 365 GGQTNANGLSVALSANHIKEASVSLKTINDSVISSSVAAAMGFFHAGETAVDQRNSGVST 424
Query: 378 AAGK------IGSISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMAS 417
AG + + + +++ + + + D D A
Sbjct: 425 YAGAQAMMSIAEAARKTLDSIRSDLGSVQNQLVSTINNITVTQVNVKSAESQIRDVDFAE 484
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ES S Q A+S N + +L L +
Sbjct: 485 ESANFSKFNILAQSGSYAMSQANAAQQNVLRLLQ 518
>gi|260772315|ref|ZP_05881231.1| flagellin B [Vibrio metschnikovii CIP 69.14]
gi|260611454|gb|EEX36657.1| flagellin B [Vibrio metschnikovii CIP 69.14]
Length = 376
Score = 134 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 81/221 (36%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L ++ +R+SSG R++ A D+AA I+ + S + L
Sbjct: 4 NVNTNVSAMTAQRHLNSAADGVQKSMERLSSGYRINSARDDAAGLQISNRLTSQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
G S A+ M ++ +++ +++ +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMGESTNILQRMRDLALQSSNGSNSRSERVAIQEEVTALNQEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L GS + I + + T +
Sbjct: 124 NRIAESTSFGGNRLLNGTFGSKSFQIGAESGEAVLLTMGSLRSDTAEMGGKAYRAETGQT 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
L N+ K I+ V D ++T
Sbjct: 184 PDWRVTTATELTLNYTDKQGEAREITINAKVGDDLEEVATY 224
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 41/105 (39%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ +E ++ +D +K + +G+ +R + ++ + V
Sbjct: 271 QDVNVKNIDVTTVAGSQEAIAILDGALKSVDSQRASLGAFQNRFSHAINNLENTNENVNA 330
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R+ D D A E+T ++ Q QQ + L+ S + LSL
Sbjct: 331 SRSRIQDTDYARETTAMTKAQILQQASTSVLAQAKQSPSAALSLL 375
>gi|254036288|gb|ACT56533.1| flagellin antigen z91 [Salmonella enterica subsp. enterica serovar
Mygdal]
Length = 425
Score = 134 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 53/425 (12%), Positives = 110/425 (25%), Gaps = 44/425 (10%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
L +R+SSGLR++ A D+AA +IA ++ L+ S G S + +
Sbjct: 1 SALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGAL 60
Query: 82 SKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 NEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDN 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ A I Q +D + + + D +
Sbjct: 121 TLTIQVGANDGETIDIDLKQINSQTLGLDTLSVQDAYTPKGTAVTRDVTTYKDGGTTLTA 180
Query: 199 EP-----------------------------------------QVLKDIDVSVYDASGTI 217
+ A+ +
Sbjct: 181 PTAAEIDTALDLTGATGTAAVKFKDGNYFVEVTGTTAKNGLYEATVDAAGAVTMTANKST 240
Query: 218 STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASA 277
T + A A + A + + K+ V +
Sbjct: 241 VTGAGTVTKNQIVDAVTPAPVDTVAAATALTNAGVTGATGNTSLVKMSFEDKNGKVTDAG 300
Query: 278 TYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
+++GN K + T +
Sbjct: 301 YALKVGNDYYAADYDEKTGEIKAKTVNYTDATGATKTGAVKFGGANGKTEVVTTVDGNTY 360
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
S V + + + E ++ ID + A +G++ +R + +
Sbjct: 361 QASDVKGHNFQSGGALSEAVTTKTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITNLG 420
Query: 398 LMRDA 402
+
Sbjct: 421 NTVNN 425
>gi|126665055|ref|ZP_01736038.1| Flagellin and related hook-associated protein [Marinobacter sp.
ELB17]
gi|126630425|gb|EBA01040.1| Flagellin and related hook-associated protein [Marinobacter sp.
ELB17]
Length = 844
Score = 134 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 54/372 (14%), Positives = 116/372 (31%), Gaps = 3/372 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++++A + L + V +R+SSGLR++ A D+AA +I+ ++ L+
Sbjct: 4 VINTNIASLNAQRNLNASQSDSNVALERLSSGLRINSAKDDAAGLAISTRFQAQITGLNM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ + + + + I+ +D +++ E+ Q +++
Sbjct: 64 AQRNANDGISLAQTAEGALDEVTNNLQRIRELSVQSSNATNSTSDRQALNQEVQQRIAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SFNG L G T + + + +L
Sbjct: 124 NRIASQTSFNGLKVLNGTFGEQTFQVGANAGETIGVSGLDARGSQIGGVISRTANLLTQP 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G LD + + A + T + A + + AA T
Sbjct: 184 LGTGPAGELSLDISALDFTAGAGVTANISLNGGADLGLGTSTYADADAFASAVDAAITTV 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ ++ L + A + + + + + + + +
Sbjct: 244 GFSAALSADGNSLVFSNATGDEVTTNVAINDSTGTQVNVAGLTPSLNAATANPSNIELFT 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
N + + VD + T ++ + S + +T TD
Sbjct: 304 ASNLGNLDLETGATVSFSVDGNAFTYTLPASGANDLTALVSGINGKLTTDGYTDLSVAVN 363
Query: 360 AMEEMVSFIDTQ 371
+
Sbjct: 364 GSAIDLQNSSQA 375
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 51/427 (11%), Positives = 124/427 (29%), Gaps = 10/427 (2%)
Query: 31 VSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMST 90
+S+ +S D+ + + + D++ +S ++ A + + V++
Sbjct: 423 LSTATTISFTVDDGSGSAP-----QAFSYTTTAGDSLTTLTSGLNTALSAQFSDLGVVAN 477
Query: 91 IKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVI 150
+ + S + I+ T ++ A ++
Sbjct: 478 SGAIDLQTGATSGGNTYTIAATDITDSSVNSISGTDPTAAVASAPTPDTAALADFGSTID 537
Query: 151 GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
+ V T D + +T + + ++ + ++ S
Sbjct: 538 LDSGVTGSFVVNDGTTDTTVSFTLAAGTGNTLAMLNTAINNGLTTAGLDANLSTSVNGST 597
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
++ + S I A +
Sbjct: 598 ATQIDLTNSSTGAAYSISDFTAADGGTANVSVASTTPIGAATGPTLAESFENGDSVKFDV 657
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ +DI + + T N+ + + + ++ ++ S
Sbjct: 658 DVNGTAFQIEARSLNDIVAKINSLTVETGIRANLNAANESIIFSSQFGESYDISITSPSL 717
Query: 331 LPKE-----IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
L + I+ + N T N A + +L EE + ID ++G++
Sbjct: 718 LDVDGITPRINEVLNATVANNTVSVNDLAVDTRLGAEETLVAIDYAFDKINGFRAELGAL 777
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445
+R + + + R+ DAD A+E+ L+ Q Q + L+ N +
Sbjct: 778 QNRFESTIANLSTTTENLSAANSRIRDADFAAETAELARTQVLQSAGLSVLAQANARPQQ 837
Query: 446 ILSLFRG 452
+L L +G
Sbjct: 838 VLQLLQG 844
>gi|217077418|ref|YP_002335136.1| flagellin [Thermosipho africanus TCF52B]
gi|217037273|gb|ACJ75795.1| flagellin [Thermosipho africanus TCF52B]
Length = 387
Score = 134 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + + N ++ +R+SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNISALNAWRSIGQTNMSMTKTLERLSSGLRINRAGDDAAGLAISEKMRGQIKGLNMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ D IQ+E+ QL+ ++
Sbjct: 63 IKNSQDAISLIQTAEGALTEVHSILQRMRELSVQASSDTNTDVDRNQIQAELDQLREEID 122
Query: 121 DIARGSSFNGENWLRT 136
IAR + FN + L
Sbjct: 123 RIARTTEFNTKKLLDG 138
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 40/97 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ A E + ID I ++ +G++ +R+ + + + + R+ DAD
Sbjct: 291 VTTQDAAERSIMVIDAAIHKVSSQRAALGAVQNRLEHTISNLGVAAENLTAAESRVRDAD 350
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + Q Q ++ L+ N +L L R
Sbjct: 351 MAKEMMEFTKQQILLQSSMGMLAQANAQPQNVLQLLR 387
>gi|294084410|ref|YP_003551168.1| flagellin FliC [Candidatus Puniceispirillum marinum IMCC1322]
gi|292663983|gb|ADE39084.1| flagellin FliC [Candidatus Puniceispirillum marinum IMCC1322]
Length = 812
Score = 134 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 3/181 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT+I TN SA++A L + N +E R+SSG +V+ AAD+AA +IA M++ L
Sbjct: 1 MTAINTNVSALNAQYYLSNTNKEMEQSMQRLSSGFKVNSAADDAAGLAIAGRMEAQTRGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQS 117
+ S A+ + + +++ I+ +D S+ +E+ L++
Sbjct: 61 TMAIKNANDAVSLAQTAEGALGEVTNMLQRIRELAVNSANSTLNDSDRLSLDNEVQALKA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + ++FN +N L K ++ + + L+
Sbjct: 121 EIDRVGSTTTFNSQNLLDGTYKGKFQIGDKDGQTVDLKIGSAMTSALGMGGGASGSNTLV 180
Query: 178 D 178
Sbjct: 181 S 181
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 42/367 (11%), Positives = 104/367 (28%)
Query: 85 IDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
D + + G + +K++ T L + + ++ NG N ++ +
Sbjct: 446 TDDIVLGETLSINGQQLTHVTKTVAGLTTLLNTVSDETGLVATQNGNNITLAGENVTSLN 505
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
I S + + + + ++ + +
Sbjct: 506 IDFSTVADLTDGLTSTATSSAALIKGVMQDGGVAATARELTIVAGDVKEGRTFTFSSTGA 565
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
D + +A ++ + FD A +
Sbjct: 566 TGADFSVDYTVVSGDTATTVAQGIANLVRNTGSPFDVADASGISAAAGVITIVSGLNYGD 625
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ +S + G + + + T +
Sbjct: 626 GTMKFEVKTGSSKDVLSTGGTAGTPVTSYASIKLDSTSNTPIKIDTGATNAGANHAARHG 685
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+ + D ++ + + + ++ +D I + G +G+
Sbjct: 686 FINANVGAADFDVNEPTLSAAGGSSMSGLSISTATGAVAALTTLDNAIDSVNSIRGDLGA 745
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
I +R+ + + + E GR++DAD A E+++L+ Q Q A L+ N S
Sbjct: 746 IQNRLSYTTNNLSSIVTNTEGAKGRIMDADFAVETSKLAKTQILSQAATSMLAQANQSKQ 805
Query: 445 RILSLFR 451
+L+L +
Sbjct: 806 SLLALLQ 812
>gi|153836951|ref|ZP_01989618.1| polar flagellin [Vibrio parahaemolyticus AQ3810]
gi|149749724|gb|EDM60469.1| polar flagellin [Vibrio parahaemolyticus AQ3810]
Length = 377
Score = 134 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 48/365 (13%), Positives = 102/365 (27%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +A+ A + L L +R+SSG R++ A D+AA I+ ++S L
Sbjct: 4 TVNTNVAALVAQRHLTSATDMLNQSMERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ ++M +++ + ++Q E+T L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSQAERTALQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G S+ I S + +
Sbjct: 124 NRIAETTSFGGRKLLNGTFGKSSFQIGASSGEAVQIELKSMRTDGLDMGGFSYVAQGRAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + K + T
Sbjct: 184 SDWQVKENANDLTMSFTNRSGETEKIQINAKAGDDIEELATYINGQTDKVTASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + T + + V T + S
Sbjct: 244 QIFMAGEETAGTISFSGDLASELGMSLKGYDAVNNLNITTVGGAQQAVAVLDTAMKFVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D L + ++ D + + +
Sbjct: 304 QRAELGAYQNRFNHAINNLDNIHENLTASNSRIQDTDYAKETTQMVKQQILQQVSTTILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/364 (9%), Positives = 93/364 (25%)
Query: 87 VMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
V T + + + S I + + + + +
Sbjct: 13 VAQRHLTSATDMLNQSMERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDVAVRNANDGI 72
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + + + + +S + T + +
Sbjct: 73 SIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSQAERTALQEEVTALNDELNRIAETTSF 132
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ A++ A + + + +
Sbjct: 133 GGRKLLNGTFGKSSFQIGASSGEAVQIELKSMRTDGLDMGGFSYVAQGRADSDWQVKENA 192
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ S + + + T G T+ A V +
Sbjct: 193 NDLTMSFTNRSGETEKIQINAKAGDDIEELATYINGQTDKVTASVNEKGQLQIFMAGEET 252
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + ++L N ++ V+ +DT +K + ++G+
Sbjct: 253 AGTISFSGDLASELGMSLKGYDAVNNLNITTVGGAQQAVAVLDTAMKFVDSQRAELGAYQ 312
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + + + + + + R+ D D A E+T++ Q QQ++ L+ +
Sbjct: 313 NRFNHAINNLDNIHENLTASNSRIQDTDYAKETTQMVKQQILQQVSTTILAQAKQAPNLA 372
Query: 447 LSLF 450
L+L
Sbjct: 373 LTLL 376
>gi|73666235|gb|AAZ79794.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Newport]
Length = 434
Score = 134 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 59/433 (13%), Positives = 125/433 (28%), Gaps = 50/433 (11%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA ++ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG------- 139
++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 RVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVAA 120
Query: 140 -------------------------SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
++ + +G +T D
Sbjct: 121 NDGETIDIDLKQINSQTLGLDTLNVQKAYDVSATAAMDPKSFTDGTKNLTAPDATAIKAA 180
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ ++T + L ++ K + + + ++ A T A
Sbjct: 181 LGNPAATGDSLSATLSFKDGKYYATVAGYTNAADTSKNGKYEVNVDSATGAVTFNAAPTK 240
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A T D + P+ + S + + AA + + +
Sbjct: 241 ATVTGDTTVTKVQVNAPVAVSTDVKKALEDGGVSNADATAAKLVKMSYTDKNGKSIDGGY 300
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK---------------EIDSGY 339
Y + G V T + + + K
Sbjct: 301 ALEAGGKYYAATYDEGTGKITANVTTYTDSTGATKTAANQLGGVDGKTEVVTIDGKTYNA 360
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
S + + A E ++ ID + A +G++ +R + +
Sbjct: 361 SKAAGHDXKAQPELAEAAAKTTENPLAKIDAALAQVDALRSDLGAVQNRFNSAITNLGNT 420
Query: 400 RDAVEKGVGRLVD 412
+ + + R+ D
Sbjct: 421 VNNLSEARSRIED 433
>gi|254785380|ref|YP_003072809.1| flagellin [Teredinibacter turnerae T7901]
gi|237686919|gb|ACR14183.1| Flagellin probable A-type [Teredinibacter turnerae T7901]
Length = 576
Score = 134 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 55/417 (13%), Positives = 132/417 (31%), Gaps = 17/417 (4%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN +A+++ ++L ++ +R++SG R+++A D+AA +I+ S L
Sbjct: 3 LVINTNVAALNSQRQLVKSGNDMSQAMERLASGKRINNARDDAAGLAISNRQTSQIRGLD 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G S + A+ + + +++ ++ D ++ +E+ QL+ +
Sbjct: 63 QAIRNANDGVSLIQTAEGALDEVTNILQRMRELSIQSANGIYSDLDRSTLDAEVQQLKEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA ++FNG+ L L + + + G + D L
Sbjct: 123 VDRIASSTTFNGQPLLDGSLSDVSLQVGSEAYQTIDLSIQGFSASALGNNSGDYVGEALT 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++T + + V + + + L +
Sbjct: 183 AATPAQALGLIQTIAANVLEVNDVAISSLTAATSVNDALEILNSDLDGKGAEVSTLVSVV 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS-------------ATYIRMGNS 285
D A + + + + + A G
Sbjct: 243 ADTAGNGVLPTGTNFSFSLVDGDGNSQDYIITDTSSMDDLVARINEGTAVTAKLNSDGKL 302
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
+ T+ +IT+D +A + + DT + + + + +
Sbjct: 303 VLTAENATQITITTDQSSATGGIATTSFSWVFTDTSNENRGVKIEAGTAMTATIQEGLGL 362
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS-ISSRIHLQEDFIKLMRD 401
+ N + + ++ D I A + GS ++++ L I + +
Sbjct: 363 NMQDDNENWIGTAVTATAAINAGDLVINDVAIGAIEAGSDAAAQVDLTIAAINELSN 419
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 54/379 (14%), Positives = 103/379 (27%), Gaps = 5/379 (1%)
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSS 127
+ A + + DV + T+ + S S L + ++
Sbjct: 187 AQALGLIQTIAANVLEVNDVAISSLTAATSVNDALEILNSDLDGKGAEVSTLVSVVADTA 246
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS-----TD 182
NG T+ S + I D + + T L+S T
Sbjct: 247 GNGVLPTGTNFSFSLVDGDGNSQDYIITDTSSMDDLVARINEGTAVTAKLNSDGKLVLTA 306
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + D S K + T A ++ Q
Sbjct: 307 ENATQITITTDQSSATGGIATTSFSWVFTDTSNENRGVKIEAGTAMTATIQEGLGLNMQD 366
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
I + A A + ++ A + + I N
Sbjct: 367 DNENWIGTAVTATAAINAGDLVINDVAIGAIEAGSDAAAQVDLTIAAINELSNETGVVAY 426
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
+T + + + I M T + +
Sbjct: 427 EVTTTQIGLRAADQSPIQIRYGDGAVNANVETITGFQEMNAAEGTGSIAGIEIDTARGAQ 486
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ IDT ++ + +G+I++R+ + + + R+VDAD ASE+++L
Sbjct: 487 AAIDIIDTALEQINSTRSDLGAINNRLDFTMSNLANISEKTSAARSRIVDADFASETSKL 546
Query: 423 SALQTQQQLAVQALSIVNN 441
S Q QQ + L+ N
Sbjct: 547 SRSQVLQQASQAMLAQANA 565
>gi|551520|gb|AAD10272.1| polar flagellin [Vibrio parahaemolyticus]
Length = 378
Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 74/187 (39%), Gaps = 3/187 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQAESGKG 183
Query: 180 STDGTER 186
+
Sbjct: 184 KDWNVAQ 190
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/385 (11%), Positives = 95/385 (24%), Gaps = 11/385 (2%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++ A T ++ + + +
Sbjct: 4 NVNTNVSAM-TAQRYLNNANSAQQTSMERL-----SSGFKINSAKDDAAGLQISNRLNVQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + ++ + +
Sbjct: 58 SRGLDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVT 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ + S I + +++ N
Sbjct: 118 ALNDELNRIAETTSFGGNKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQ 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A A S + S DI AT N T +
Sbjct: 178 AESGKGKDWNVAQGKNDLKISLTDSFGQEQEININAKAGDDIEELATYINGQTDLVKASV 237
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
K+ E + + +T +E V
Sbjct: 238 DQDGKLQIFAGNNKVEGEVS-----FSGGLSGELGLGDDKKNVTVDTIDVTSVGGAQESV 292
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ ID +K + ++G+ +R + + + + V R+ D D A E+T ++
Sbjct: 293 AIIDAALKYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTAMTKS 352
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q Q + L+ + LSL
Sbjct: 353 QILSQASSSILAQRKQAPNSALSLL 377
>gi|3355298|gb|AAC27808.1| polar flagellin [Vibrio parahaemolyticus]
Length = 377
Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats.
Identities = 47/365 (12%), Positives = 102/365 (27%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +A+ A + L L +R+SSG R++ A D+AA I+ ++S L
Sbjct: 4 TVNTNVAALVAQRHLTSATDMLNQSMERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ ++M +++ + ++Q E+T L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSQAERTALQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G S+ I + + +
Sbjct: 124 NRIAETTSFGGRKLLNGTFGKSSFQIGAASGEAVQIELKSMRTDGLEMGGFSYVAQGRAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + K + T
Sbjct: 184 SDWQVKENANDLTMSFTNRSGETEKIQINAKAGDDIEELATYINGQTDKVTASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + T + + V T + S
Sbjct: 244 QIFMAGEETAGTISFSGDLASELGMSLKGYDAVNNLNITTVGGAQQAVAVLDTAMKFVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D L + ++ D + + +
Sbjct: 304 QRAELGAYQNRFNHAINNLDNIHENLAASNSRIQDTDYAKETTQMVKQQILQQVSTTILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/364 (9%), Positives = 92/364 (25%)
Query: 87 VMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
V T + + + S I + + + + +
Sbjct: 13 VAQRHLTSATDMLNQSMERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDVAVRNANDGI 72
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + + + + +S + T + +
Sbjct: 73 SIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSQAERTALQEEVTALNDELNRIAETTSF 132
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ A + A + + + +
Sbjct: 133 GGRKLLNGTFGKSSFQIGAASGEAVQIELKSMRTDGLEMGGFSYVAQGRADSDWQVKENA 192
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ S + + + T G T+ A V +
Sbjct: 193 NDLTMSFTNRSGETEKIQINAKAGDDIEELATYINGQTDKVTASVNEKGQLQIFMAGEET 252
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + ++L N ++ V+ +DT +K + ++G+
Sbjct: 253 AGTISFSGDLASELGMSLKGYDAVNNLNITTVGGAQQAVAVLDTAMKFVDSQRAELGAYQ 312
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + + + + + + R+ D D A E+T++ Q QQ++ L+ +
Sbjct: 313 NRFNHAINNLDNIHENLAASNSRIQDTDYAKETTQMVKQQILQQVSTTILAQAKQAPNLA 372
Query: 447 LSLF 450
L+L
Sbjct: 373 LTLL 376
>gi|209695749|ref|YP_002263679.1| flagellin [Aliivibrio salmonicida LFI1238]
gi|208009702|emb|CAQ80003.1| flagellin subunit C [Aliivibrio salmonicida LFI1238]
Length = 402
Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 76/183 (41%), Gaps = 3/183 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + + +R+SSG +++ A D+AA I+ + S + L
Sbjct: 29 TVNTNVSAMTAQRYLNNATDGVNKSMERLSSGYKINSAKDDAAGLQISNRLTSQSRGLDV 88
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M+++ +++ +++ +D ++IQ E+ L +L
Sbjct: 89 AVRNANDGISIAQTAEGAMNESTNILQRMRDLSLQSSNGSNTTSDREAIQQEVGALNDEL 148
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + + + +
Sbjct: 149 NRIAETTSFGGSRLLNGQFGTKSFQIGADSGEAVMLNLSNMRSDSASMGGTSYKAETELG 208
Query: 180 STD 182
+
Sbjct: 209 AGW 211
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/363 (10%), Positives = 95/363 (26%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N T GV + + S +I + + + ++ +
Sbjct: 40 QRYLNNATDGVNKSMERLSSGYKINSAKDDAAGLQISNRLTSQSRGLDVAVRNANDGISI 99
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + + ++++D + +
Sbjct: 100 AQTAEGAMNESTNILQRMRDLSLQSSNGSNTTSDREAIQQEVGALNDELNRIAETTSFGG 159
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
S + A + A + + + + A + +
Sbjct: 160 SRLLNGQFGTKSFQIGADSGEAVMLNLSNMRSDSASMGGTSYKAETELGAGWAVNAENSE 219
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
S A + + + T G T+S A V S
Sbjct: 220 LKVSFLNKAGEEKELTINAKAGDDIEQVATYINGQTDSINASVSEKGELQIVTSNDKVKG 279
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ +G + + ++ V+ +D ++ + +G+ +R
Sbjct: 280 EVSFGGSLAGELKMGAAQAETVKSIDVTTVGGSQKSVAILDAAMQFVDSNRADLGAFQNR 339
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + V R+ D D A E+T ++ Q QQ + L+ + L
Sbjct: 340 FSHAISNLDSINENVSASNSRIKDVDFAKETTEMTKAQILQQASSSILAQAKQAPNAALG 399
Query: 449 LFR 451
L R
Sbjct: 400 LLR 402
>gi|328474428|gb|EGF45233.1| flagellin [Vibrio parahaemolyticus 10329]
Length = 377
Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats.
Identities = 47/365 (12%), Positives = 103/365 (28%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +A+ A + L L+ +R+SSG R++ A D+AA I+ ++S L
Sbjct: 4 TVNTNVAALVAQRHLTSATDMLDQSMERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ ++M +++ + ++Q E+T L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSQAERTALQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G S+ I + + +
Sbjct: 124 NRIAETTSFGGRKLLNGTFGKSSFQIGAASGEAVQIELKSMRTDGLDMGGFSYVAQGRTD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + K + T
Sbjct: 184 SDWQVKENANDLTMSFTNRSGETEKIQINAKAGDDIEELATYINGQTDKVTASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + T + + V T + S
Sbjct: 244 QIFMAGEETAGTISFSGDLASELGMSLKGYDAVNNLNITTVGGAQQAVAVLDTAMKFVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D L + ++ D + + +
Sbjct: 304 QRAELGAYQNRFNHAINNLDNIHENLAASNSRIQDTDYAKETTQMVKQQILQQVSTTILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/375 (10%), Positives = 99/375 (26%), Gaps = 11/375 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+A+ ++ A D++ ++ + + +
Sbjct: 13 VAQRHLTSATDMLDQSMERL-----SSGKRINSAKDDAAGLQISNRLQSQMRGLDVAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + ++ + +
Sbjct: 68 ANDGISIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSQAERTALQEEVTALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ + +S I + ++ +A
Sbjct: 128 ETTSFGGRKLLNGTFGKSSFQIGAASGEAVQIELKSMRTDGLDMGGFSYVAQGRTDSDWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
S + DI AT N T + + ++
Sbjct: 188 VKENANDLTMSFTNRSGETEKIQINAKAGDDIEELATYINGQTDKVTASVNEKGQLQIFM 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+T T + ++L N ++ V+ +DT +K
Sbjct: 248 AGEETAGTI------SFSGDLASELGMSLKGYDAVNNLNITTVGGAQQAVAVLDTAMKFV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ ++G+ +R + + + + + + R+ D D A E+T++ Q QQ++
Sbjct: 302 DSQRAELGAYQNRFNHAINNLDNIHENLAASNSRIQDTDYAKETTQMVKQQILQQVSTTI 361
Query: 436 LSIVNNSTARILSLF 450
L+ + L+L
Sbjct: 362 LAQAKQAPNLALTLL 376
>gi|19910963|dbj|BAB87730.1| flagellin protein FliB(S) [Clostridium septicum]
Length = 375
Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA SI++ M+ L
Sbjct: 3 INHNMNAMNAHRNMATNTVATGKSMEKLSSGLRINRAGDDAAGLSISEKMRGQIRGLEQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + + +++ ++ ++ D + E+ QL ++
Sbjct: 63 SRNSQDGISLIQTTEGALNETHSILQRMRELSVQASNDTNTAEDRGQLSKELDQLTQEID 122
Query: 121 DIARGSSFNGENWLRTD 137
I+ + FN + L D
Sbjct: 123 GISSQTQFNKMDVLNGD 139
Score = 82.9 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 31/88 (35%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
+ + T + L + ID I+ + ++G+ +R+ +
Sbjct: 272 IAEKDTTMKEYKVDFKSHLVATSSIKEIDKAIEKVSTQRSQLGAYQNRLEHTIKNVDNAA 331
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQ 428
+ ++ R+ D DMA+E S
Sbjct: 332 ENLQAAESRVRDVDMANEMMTFSKNNIL 359
>gi|290475010|ref|YP_003467894.1| Flagellin [Xenorhabdus bovienii SS-2004]
gi|289174327|emb|CBJ81121.1| Flagellin [Xenorhabdus bovienii SS-2004]
Length = 323
Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 3/149 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I TN+S++ A L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 3 SVINTNYSSLLAQNNLSKSQGVLGTAIERLSSGLRINSAKDDAAGQAIANRFTANVKGLT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQ 118
+ G S + +++ + + I+ D KSIQ E+T+ +
Sbjct: 63 QAARNANDGISIAQTTEGSLNEINNNLQRIRELAVQAQNGTNSESDRKSIQEEVTKRLDE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAK 147
+ I+ + FNG L D + A
Sbjct: 123 INRISEQTQFNGVKVLSKDTTLNIQVGAN 151
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 40/89 (44%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ ++ +D + + +G++ +R+ + + + + R+ DAD A+E + +
Sbjct: 235 DTLAKLDGALSTVDSLRSSLGAVQNRLESTVNNLNNTVNNLSAAKSRIEDADYATEVSNM 294
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q QQ L+ N +LSL R
Sbjct: 295 SRGQILQQAGTSVLAQANQVPQSVLSLLR 323
>gi|258621058|ref|ZP_05716092.1| Flagellin C [Vibrio mimicus VM573]
gi|258626880|ref|ZP_05721685.1| Flagellin C [Vibrio mimicus VM603]
gi|262166273|ref|ZP_06034010.1| flagellin protein FlaD [Vibrio mimicus VM223]
gi|262170835|ref|ZP_06038513.1| flagellin protein FlaD [Vibrio mimicus MB-451]
gi|258580836|gb|EEW05780.1| Flagellin C [Vibrio mimicus VM603]
gi|258586446|gb|EEW11161.1| Flagellin C [Vibrio mimicus VM573]
gi|261891911|gb|EEY37897.1| flagellin protein FlaD [Vibrio mimicus MB-451]
gi|262025989|gb|EEY44657.1| flagellin protein FlaD [Vibrio mimicus VM223]
Length = 377
Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats.
Identities = 46/365 (12%), Positives = 106/365 (29%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLTSATNAQQTSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ EIT L +L
Sbjct: 64 AVRNANDGISMAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLNIKDMRSDNVLMGGKTYQAANGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G E + + T +
Sbjct: 184 KSWGVEAGKTDLTITLKDKREGDVTISVNAKEGDDIEELATYINGQTDMVKASVDEDGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A + T + + + + S
Sbjct: 244 QLFTDNNKVDGAATFGGALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D L ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 33/362 (9%), Positives = 86/362 (23%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
T + + S +I + + + N ++ +
Sbjct: 15 QRYLTSATNAQQTSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGVAVRNANDGISM 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + +
Sbjct: 135 NKLLNGTFSTKSFQIGADNGEAVMLNIKDMRSDNVLMGGKTYQAANGKDKSWGVEAGKTD 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + + T G T+ A V
Sbjct: 195 LTITLKDKREGDVTISVNAKEGDDIEELATYINGQTDMVKASVDEDGKLQLFTDNNKVDG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T +E V+ +D +K + ++G+ +R
Sbjct: 255 AATFGGALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + + V R+ D D A E+T L+ Q Q + L+ + L+
Sbjct: 315 FNHAINNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPNSALA 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|242309434|ref|ZP_04808589.1| flagellin [Helicobacter pullorum MIT 98-5489]
gi|239524005|gb|EEQ63871.1| flagellin [Helicobacter pullorum MIT 98-5489]
Length = 503
Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats.
Identities = 79/499 (15%), Positives = 151/499 (30%), Gaps = 51/499 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +A++A+ + +L ++SSGLR++ A D+A+ +IA ++S AL
Sbjct: 5 VNTNVNALNATAQSTFTQTSLSSSLQKLSSGLRINSAKDDASGMAIADSLRSQANALGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + IA M + + ++ TIK K T + T +IQ++I +L L
Sbjct: 65 IRNTNDGMGIIQIADKAMDEQVKILDTIKTKATQAAQDGQTTTTRTAIQADINRLIESLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA+ +S+NG N L + + + +
Sbjct: 125 NIAQTTSYNGLNLLAGSFTNKEFQVGAYSNQTIRASIGATSSDKIGHVRSETMKFTAMGG 184
Query: 181 TDGTERYGLLDRNHKIKV------------------------------------------ 198
++ I+
Sbjct: 185 VALNFIATNGGKDVSIESVVISTSAGTGLGAVAEAINKNSDNLGGVRADYTVIAAGANAI 244
Query: 199 ---EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ L VS+ + +G + K + K + +
Sbjct: 245 AAGDITSLTINGVSIGNITGVQANDKDNRLVQAINAYKDTTGVEASVDKDGRLVLTSTDG 304
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A + G S + V A+ + + I + VG+
Sbjct: 305 RAIQVSGDGMSAGGAGIVTAAGGATTTVVGSLTLTRLGAGDIKVSGTGLDGVTTAVGSAA 364
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ---I 372
T + + G + + + ++ + +D I
Sbjct: 365 AQTTTTLRQIKGELSADIKSAIGANASVNSASTEFGGTLGAGVTTLKGAMLVMDIAESAI 424
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
K +GSI ++ + I + + V+ + + D ASES S L Q
Sbjct: 425 KQLDTIRADLGSIQQQMQSTINNITITQVNVKSAESGIREVDFASESANYSNLNILAQAG 484
Query: 433 VQALSIVNNSTARILSLFR 451
A+S N IL L +
Sbjct: 485 SYAMSQANTVQQNILRLLQ 503
>gi|95929890|ref|ZP_01312631.1| flagellin-like [Desulfuromonas acetoxidans DSM 684]
gi|95134186|gb|EAT15844.1| flagellin-like [Desulfuromonas acetoxidans DSM 684]
Length = 804
Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I TN ++++A + L +L R+SSGLR++ A D+AA +I+ M + L+
Sbjct: 3 LTINTNVASLNAQRNLGKSQNDLNQSMQRLSSGLRINSAKDDAAGLAISDRMTAQITGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ + ++ +++ I+ +D +S+Q+E+ QL +
Sbjct: 63 QAVRNANDGISLSQTAEGALQESTNILQRIRELAVQSANDTNSASDRESLQAEVDQLIEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKS 148
L IA + FNG+N L + +T + +
Sbjct: 123 LDRIADTTQFNGKNLLDGTMTDATFQVGAN 152
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 50/140 (35%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ + + + S N T + + + +S +D
Sbjct: 664 TTYNGQVSLDSTNDISVEEVTSGALASAGLDTAGNATTTIDQVDISTREGATTAISSVDA 723
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ G +G++ +R ++ + + + R++DAD+A E++ ++ QQ
Sbjct: 724 ALAQIDTIRGDLGAVQNRFESTIANLQNVSENLSAARSRILDADIAEETSNMTKQNILQQ 783
Query: 431 LAVQALSIVNNSTARILSLF 450
V L+ N + LSL
Sbjct: 784 AGVSILAQANQAPQLALSLL 803
>gi|551512|gb|AAC27800.1| polar flagellin [Vibrio parahaemolyticus]
Length = 378
Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 74/187 (39%), Gaps = 3/187 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQAESGKG 183
Query: 180 STDGTER 186
+
Sbjct: 184 KDWNVAQ 190
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/385 (11%), Positives = 96/385 (24%), Gaps = 11/385 (2%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++ A T ++ + + +
Sbjct: 4 NVNTNVSAM-TAQRYLNNANSAQQTSMERL-----SSGFKINSAKDDAAGLQISNRLNVQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + ++ + +
Sbjct: 58 SRGLDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVT 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ + S I + +++ N
Sbjct: 118 ALNDELNRIAETTSFGGNKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQ 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A A S + S DI AT N T +
Sbjct: 178 AESGKGKDWNVAQGKNDLKISLTDSFGQEQEININAKAGDDIEELATYINGQTDLVKASV 237
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
K+ E + + + +T +E V
Sbjct: 238 DQDGKLQIFAGNNKVEGEVS-----FSGGLSGELGLGDVKKNVTVDTIDVTSVGGAQESV 292
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ ID +K + ++G+ +R + + + + V R+ D D A E+T ++
Sbjct: 293 AIIDAALKYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTAMTKS 352
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q Q + L+ + LSL
Sbjct: 353 QILSQASSSILAQAKQAPNSALSLL 377
>gi|304390202|ref|ZP_07372156.1| flagellar protein [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|315657466|ref|ZP_07910348.1| flagellar protein [Mobiluncus curtisii subsp. holmesii ATCC 35242]
gi|304326684|gb|EFL93928.1| flagellar protein [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|315491938|gb|EFU81547.1| flagellar protein [Mobiluncus curtisii subsp. holmesii ATCC 35242]
Length = 344
Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 65/167 (38%), Gaps = 3/167 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI N AM++ + L NL +++SSG R++ AAD+++ +I++ ++S
Sbjct: 30 LSINQNIMAMNSYRNLSLTQSNLGKSLEKLSSGFRINRAADDSSGLAISEGLRSQVRGNK 89
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQ 118
G S V A+ +++ D++ ++ I+ E+ QL+ +
Sbjct: 90 QAVKNAQDGISVVQTAEGALNEVHDMLQRMRELAVKGANDTNDSKARAFIEQEMGQLKME 149
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT 165
L + ++F+G L ++ +
Sbjct: 150 LVRVGASTNFDGRKLLWNGAKVDKDTVVTGSDFAIAETAGKDQAEWW 196
Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 48/150 (32%)
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ S D + + + + ++ A +
Sbjct: 195 WWGKSKGVLAFQVGANGDAQVDDISVQLEDLVTTTLKSLDTKYSVKGTEADIAIKDHKGY 254
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ IDT I + GS+ +R + + + + + R+ D DMASE +
Sbjct: 255 MAEIGKIDTAIHAVSKLRSDFGSVQNRFEHTINNLNVAVENLSASEARIRDTDMASEMMQ 314
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q QQ L+ N +LSL R
Sbjct: 315 FTRGQILQQAGTSMLAQANQVPQTVLSLLR 344
>gi|90021845|ref|YP_527672.1| flagellin FliC [Saccharophagus degradans 2-40]
gi|89951445|gb|ABD81460.1| flagellin-like protein [Saccharophagus degradans 2-40]
Length = 587
Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 77/183 (42%), Gaps = 3/183 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ +N S+++A +++ L+ +R++SG R++ AAD+AA +I+ S L
Sbjct: 3 LVVNSNISSLNAQRQMLKTGAELDQASERLASGKRINSAADDAAGLAISNRQTSTIRGLD 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G S + A+ + + +++ ++ TD ++ +E+ QL+++
Sbjct: 63 QAIRNANDGISMIQTAEGALDETTNILQRMRELAIQSSNGIYSDTDRATLNAEVQQLKAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA ++FNG+N L LG+ + + + G + D
Sbjct: 123 IDRIADTTAFNGQNILDGSLGNVSLQVGAEANETIGVSIGGFSTNSIGGSGGDIIGEAST 182
Query: 179 SST 181
Sbjct: 183 GLA 185
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 47/98 (47%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ A ++ + ID+ ++ +G+I++R+ + + + R+VDA
Sbjct: 490 NISTASAAQKAIDVIDSALEQINTTRSDLGAINNRLDFTVSNLANVSENTSAARSRVVDA 549
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D A+E+ +LS Q QQ + L+ N ++LSL +
Sbjct: 550 DFAAETAQLSRAQVLQQASQAMLAQANARPQQVLSLLQ 587
>gi|156973598|ref|YP_001444505.1| flagellin [Vibrio harveyi ATCC BAA-1116]
gi|156525192|gb|ABU70278.1| hypothetical protein VIBHAR_01301 [Vibrio harveyi ATCC BAA-1116]
Length = 377
Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats.
Identities = 48/365 (13%), Positives = 114/365 (31%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+++TN SAM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVITNVSAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTYGTQSFQIGADNGEAVMLNLKDMRSDNKMMGGVSYQADNGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
E + Q + + T +
Sbjct: 184 KNWNVEAGKNDLKISLTDSFGQEQEINISAKAGDDIEELATYINGQTDLVKASVDQDGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + G K T + + + + S
Sbjct: 244 QVFAGNNKVEGDVEFSGGLSGELGLNDGKKVTVDTIDVTSVGGAQESVAIIDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D + ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 39/362 (10%), Positives = 88/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S + + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + K + +
Sbjct: 135 NKLLNGTYGTQSFQIGADNGEAVMLNLKDMRSDNKMMGGVSYQADNGKDKNWNVEAGKND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
S+ S + N + T G T+ A V
Sbjct: 195 LKISLTDSFGQEQEINISAKAGDDIEELATYINGQTDLVKASVDQDGKLQVFAGNNKVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
SG + +T +E V+ ID +K + ++G+ +R
Sbjct: 255 DVEFSGGLSGELGLNDGKKVTVDTIDVTSVGGAQESVAIIDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T+++ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILAQAKQAPNSALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|260899922|ref|ZP_05908317.1| polar flagellin [Vibrio parahaemolyticus AQ4037]
gi|308107375|gb|EFO44915.1| polar flagellin [Vibrio parahaemolyticus AQ4037]
Length = 377
Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats.
Identities = 47/365 (12%), Positives = 102/365 (27%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +A+ A + L L +R+SSG R++ A D+AA I+ ++S L
Sbjct: 4 TVNTNVAALVAQRHLTSATDMLNQSMERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ ++M +++ + ++Q E+T L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSQAERTALQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G S+ I + + +
Sbjct: 124 NRIAETTSFGGRKLLNGTFGKSSFQIGAASGEAVQIELKSMRTDGLDMGGFSYVAQGRAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + K + T
Sbjct: 184 SDWQVKENANDLTMSFTNRSGETEKIQINAKAGDDIEELATYINGQTDKVTASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + T + + V T + S
Sbjct: 244 QIFMAGEDTAGTISFSGDLASELGMSLKGYDAVNNLNITTVGGAQQAVAVLDTAMKFVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D L + ++ D + + +
Sbjct: 304 QRAELGAYQNRFNHAINNLDNIHENLAASNSRIQDTDYAKETTQMVKQQILQQVSTTILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/375 (10%), Positives = 100/375 (26%), Gaps = 11/375 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+A+ ++ A D+++ ++ + + +
Sbjct: 13 VAQRHLTSATDMLNQSMERL-----SSGKRINSAKDDAAGLQISNRLQSQMRGLDVAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + ++ + +
Sbjct: 68 ANDGISIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSQAERTALQEEVTALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ + +S I + ++ +A
Sbjct: 128 ETTSFGGRKLLNGTFGKSSFQIGAASGEAVQIELKSMRTDGLDMGGFSYVAQGRADSDWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
S + DI AT N T + + ++
Sbjct: 188 VKENANDLTMSFTNRSGETEKIQINAKAGDDIEELATYINGQTDKVTASVNEKGQLQIFM 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
DT T + ++L N ++ V+ +DT +K
Sbjct: 248 AGEDTAGTI------SFSGDLASELGMSLKGYDAVNNLNITTVGGAQQAVAVLDTAMKFV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ ++G+ +R + + + + + + R+ D D A E+T++ Q QQ++
Sbjct: 302 DSQRAELGAYQNRFNHAINNLDNIHENLAASNSRIQDTDYAKETTQMVKQQILQQVSTTI 361
Query: 436 LSIVNNSTARILSLF 450
L+ + L+L
Sbjct: 362 LAQAKQAPNLALTLL 376
>gi|37525877|ref|NP_929221.1| flagellin [Photorhabdus luminescens subsp. laumondii TTO1]
gi|36785306|emb|CAE14247.1| Flagellin [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 355
Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 59/151 (39%), Gaps = 3/151 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNRSQGTLGSAIERLSSGLRINSAKDDAAGQAIANRFTANVRGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
+ G S + +++ + I+ SIQ E+TQ ++
Sbjct: 64 AARNANDGISIAQTTEGALNEINTNLQRIRELTVQSQNGSNSESDIKSIQEEVTQRLKEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVI 150
I+ + FNG LR D + A
Sbjct: 124 DRISEQTQFNGVRVLREDSKMTIQVGANDNE 154
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 42/95 (44%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
A E+ + +D+ + + +G+I +R+ + + + + R+ DAD A
Sbjct: 261 TAKASEKPLETLDSALAQVDSLRSSLGAIQNRLESTVNNLNNTVNNLSAARSRIEDADYA 320
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+E + +S Q QQ L+ N ++SL R
Sbjct: 321 TEVSNMSRGQILQQAGTAVLAQANQVPQNVMSLLR 355
>gi|28897564|ref|NP_797169.1| flagellin [Vibrio parahaemolyticus RIMD 2210633]
gi|28899033|ref|NP_798638.1| flagellin [Vibrio parahaemolyticus RIMD 2210633]
gi|260364621|ref|ZP_05777223.1| A-type flagellin [Vibrio parahaemolyticus K5030]
gi|260365221|ref|ZP_05777778.1| A-type flagellin [Vibrio parahaemolyticus K5030]
gi|260878274|ref|ZP_05890629.1| A-type flagellin [Vibrio parahaemolyticus AN-5034]
gi|260897366|ref|ZP_05905862.1| A-type flagellin [Vibrio parahaemolyticus Peru-466]
gi|260898104|ref|ZP_05906600.1| A-type flagellin [Vibrio parahaemolyticus Peru-466]
gi|260899924|ref|ZP_05908319.1| A-type flagellin [Vibrio parahaemolyticus AQ4037]
gi|29840859|sp|Q56702|FLAB_VIBPA RecName: Full=Polar flagellin B/D
gi|28805776|dbj|BAC59053.1| polar flagellin FlaD [Vibrio parahaemolyticus RIMD 2210633]
gi|28807252|dbj|BAC60522.1| polar flagellin D [Vibrio parahaemolyticus RIMD 2210633]
gi|308086133|gb|EFO35828.1| A-type flagellin [Vibrio parahaemolyticus Peru-466]
gi|308088260|gb|EFO37955.1| A-type flagellin [Vibrio parahaemolyticus Peru-466]
gi|308090113|gb|EFO39808.1| A-type flagellin [Vibrio parahaemolyticus AN-5034]
gi|308107325|gb|EFO44865.1| A-type flagellin [Vibrio parahaemolyticus AQ4037]
gi|308115096|gb|EFO52636.1| A-type flagellin [Vibrio parahaemolyticus K5030]
gi|308115392|gb|EFO52932.1| A-type flagellin [Vibrio parahaemolyticus K5030]
Length = 378
Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 74/187 (39%), Gaps = 3/187 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQAESGKG 183
Query: 180 STDGTER 186
+
Sbjct: 184 KDWNVAQ 190
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/385 (11%), Positives = 95/385 (24%), Gaps = 11/385 (2%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++ A T ++ + + +
Sbjct: 4 NVNTNVSAM-TAQRYLNNANSAQQTSMERL-----SSGFKINSAKDDAAGLQISNRLNVQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + ++ + +
Sbjct: 58 SRGLDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVT 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ + S I + +++ N
Sbjct: 118 ALNDELNRIAETTSFGGNKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQ 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A A S + S DI AT N T +
Sbjct: 178 AESGKGKDWNVAQGKNDLKISLTDSFGQEQEININAKAGDDIEELATYINGQTDLVKASV 237
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
K+ E + + +T +E V
Sbjct: 238 DQDGKLQIFAGNNKVEGEVS-----FSGGLSGELGLGDDKKNVTVDTIDVTSVGGAQESV 292
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ ID +K + ++G+ +R + + + + V R+ D D A E+T ++
Sbjct: 293 AIIDAALKYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTAMTKS 352
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q Q + L+ + LSL
Sbjct: 353 QILSQASSSILAQAKQAPNSALSLL 377
>gi|188576764|ref|YP_001913693.1| flagellin [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188576956|ref|YP_001913885.1| flagellin [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188521216|gb|ACD59161.1| flagellar protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188521408|gb|ACD59353.1| flagellar protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 390
Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats.
Identities = 66/446 (14%), Positives = 134/446 (30%), Gaps = 59/446 (13%)
Query: 9 SAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
+++A + L + +L + ++SSG R++ A +AA +IA+ + L S
Sbjct: 1 MSLNAQRNLNTNSSSLALSIQQLSSGKRITSFAVDAAGGAIAERFTTQIRGLDVASRNAN 60
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARG 125
G S A+ M + + + I+ TD +++ SE+ QL S++ +A
Sbjct: 61 DGISLSQTAEGAMQEIGNNLQRIRELSVQSANATNSSTDREALNSEVKQLTSEIDRVANQ 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+SFNG L + +
Sbjct: 121 TSFNGTKLLDGSFSGALFQVGA-----------------------------------DAG 145
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
+ ++ ++ + +V A + + + K A+ +
Sbjct: 146 QTIGINSIADANIDTLGRANFAAAVSAAGVSGTATASGSVSGISLSFKDASGSAKSITIA 205
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A + K A+ G+ I ++ + G ++
Sbjct: 206 DVKVGAGDTAADVNKKVASAINDKLDQTGMYASIKSDGSVQIESLKAGQDFTSLSAGTSS 265
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ VG S + S + L I A T + + M +
Sbjct: 266 AAGITVGAGITTASAASGSTASTLGSLDISTFSGAQQALEIVDKALTTVNSSRADMGAVQ 325
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ + I +A + + + SRI D A + L+
Sbjct: 326 NRFTSTIANLSATSENLSASRSRIADT---------------------DYAKSTAELTRT 364
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ L+ + +LSL +
Sbjct: 365 QILQQAGTAMLAQAKSVPQNVLSLLQ 390
>gi|311694368|gb|ADP97241.1| flagellar hook-associated protein FlgL [marine bacterium HP15]
Length = 407
Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats.
Identities = 62/453 (13%), Positives = 128/453 (28%), Gaps = 52/453 (11%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I + +L+++N +L Q ++S+G RV+ +D+ + + + +
Sbjct: 1 MIRISSQQIFSGGINRLQELNTSLNNTQQQISTGQRVNKPSDDPVAAARILKLDQELSRV 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ L +++ + +S +IDV+ I+ D +SI SE+ +
Sbjct: 61 ETYQRNVDLADNRLKQEENALSSSIDVIQRIRELTVQAGNGSLSANDRRSISSELEERLG 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
QL +IA +GE GS A + D G+ + D P +
Sbjct: 121 QLANIANTRDASGEYIFSGFQGSVKAFEQDPSGSWVYQGDEGQRVLEIDDGVTVPISDNG 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + +
Sbjct: 181 KDIFVRVPAAITGEHSTVSTPGASISGVKL------------------------------ 210
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ A A + + V A I + +
Sbjct: 211 --------------VNEADLAAAYPNSFPDDITVEVDAGGNIIATDSQGDVLTVDPATYQ 256
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ +P + + T + K NI + +
Sbjct: 257 SGEPFEVAGVEVTLTDAVPGAGDVFTLKINEKQSVFGTIENLISGLNNIDKSSPDGQSQY 316
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ + +D + ++G + + + F++ + +L D D A
Sbjct: 317 DDLIANSLINLDNAQESIILKQTELGGRMNAVESTKSFLEDSSVYSNEIRSQLQDVDYAE 376
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ LS Q A Q+ + V+ LSLF
Sbjct: 377 AISTLSFQSFVLQAAQQSFAQVSQ-----LSLF 404
>gi|225570003|ref|ZP_03779028.1| hypothetical protein CLOHYLEM_06098 [Clostridium hylemonae DSM
15053]
gi|225161473|gb|EEG74092.1| hypothetical protein CLOHYLEM_06098 [Clostridium hylemonae DSM
15053]
Length = 545
Score = 133 bits (333), Expect = 7e-29, Method: Composition-based stats.
Identities = 65/436 (14%), Positives = 140/436 (32%), Gaps = 11/436 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A+++ + L + N + +++SSG R++ A D+AA +I++ M++ L
Sbjct: 29 IQHNIAALNSYRNLTNNNSAVSKNLEKLSSGYRINRAGDDAAGLAISEKMRAQITGLETA 88
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT----DSKSIQSEITQLQSQL 119
G S V A+ +++ +++ + D ++Q EI L+ ++
Sbjct: 89 QKNAQDGISLVQTAEGALTEVHSMLNRMVELADQSANGTYDNKTDRANLQKEIQSLKDEI 148
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ G++FNG N L LGS++ + + D V +
Sbjct: 149 DRISEGTNFNGINLLDGSLGSTSKANVAVDVKYSGLDSKPGVLTLQAATTAGTTIAAGSA 208
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ T ++ K ++ + +A T + + L L
Sbjct: 209 NALSTADKTTMEVTFSDANGNLQKKTVEFTAANADITHADNEAVLQKAFEDALGDGYTVS 268
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A ++ S S +D + R T + +
Sbjct: 269 VAGGAVTIASKTAGAGDKLEIFSAKLSDSTGAIANDFGAVANTPGADAYYRLNTGAGVLT 328
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T + + + +T + K + + +
Sbjct: 329 AYDGTGNAEDHIFEINGQKFAFATADGAAKLASDVNYIETAAANPTEANIDSMISMINNK 388
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
V T I+ G+ + + LQ + + +G DM++ +
Sbjct: 389 TGIGAVKHGTTDIE--LKPGTTTGANGNGLTLQIGDTAESFNQLTVSIG-----DMSTSA 441
Query: 420 TRLSALQTQQQLAVQA 435
LS + Q +A
Sbjct: 442 LGLSGVDISTQAGAKA 457
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 39/97 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + V I I ++ G +G+I +R+ + + + + + R+ D D
Sbjct: 449 ISTQAGAKAAVDVIRNAINSVSSTRGDLGAIQNRLEHTINNLSVTTENMTAAESRIRDVD 508
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA+E + Q + L+ N +L L +
Sbjct: 509 MANEMMAYTKNNILVQASQAMLAQANQIPQGVLQLLQ 545
>gi|28899035|ref|NP_798640.1| flagellin [Vibrio parahaemolyticus RIMD 2210633]
gi|260365219|ref|ZP_05777776.1| polar flagellin F [Vibrio parahaemolyticus K5030]
gi|260876883|ref|ZP_05889238.1| polar flagellin F [Vibrio parahaemolyticus AN-5034]
gi|260897364|ref|ZP_05905860.1| polar flagellin F [Vibrio parahaemolyticus Peru-466]
gi|29611943|sp|O87081|FLAF_VIBPA RecName: Full=Polar flagellin F
gi|28807254|dbj|BAC60524.1| polar flagellin F [Vibrio parahaemolyticus RIMD 2210633]
gi|308088247|gb|EFO37942.1| polar flagellin F [Vibrio parahaemolyticus Peru-466]
gi|308091379|gb|EFO41074.1| polar flagellin F [Vibrio parahaemolyticus AN-5034]
gi|308115431|gb|EFO52971.1| polar flagellin F [Vibrio parahaemolyticus K5030]
Length = 377
Score = 133 bits (333), Expect = 7e-29, Method: Composition-based stats.
Identities = 48/365 (13%), Positives = 103/365 (28%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +A+ A + L L +R+SSG R++ A D+AA I+ ++S L
Sbjct: 4 TVNTNVAALVAQRHLTSATDMLNQSMERLSSGKRINSAKDDAAGLQISNRLQSQMSGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ ++M +++ + ++Q E+T L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSQVERTALQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G S+ I + + +
Sbjct: 124 NRIAETTSFGGRKLLNGAFGKSSFQIGAASGEAVQIELKSMRTDGLEMGGFSYVAQGRAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + I + K + T
Sbjct: 184 SDWQVKENANDLTMSFINRSGETEKIQINAKSGDDIEELATYINGQTDKVTASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + T + + V T + S
Sbjct: 244 QIFMAGEDTAGTISFSGDLASELGMSLKGYDAVNNLNITTVGGAQQAVAVLDTAMKFVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D L + ++ D + + +
Sbjct: 304 QRAELGAYQNRFNHAINNLDNIHENLAASNSRIQDTDYAKETTQMVKQQILQQVSTTILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/375 (11%), Positives = 101/375 (26%), Gaps = 11/375 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+A+ ++ A D+++ ++ + + + S
Sbjct: 13 VAQRHLTSATDMLNQSMERL-----SSGKRINSAKDDAAGLQISNRLQSQMSGLDVAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + ++ V + +
Sbjct: 68 ANDGISIMQTAEGAMNEVTNIMQRMRDLSLQSANGSNSQVERTALQEEVTALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ + +S I + ++ +A
Sbjct: 128 ETTSFGGRKLLNGAFGKSSFQIGAASGEAVQIELKSMRTDGLEMGGFSYVAQGRADSDWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
S DI AT N T + + ++
Sbjct: 188 VKENANDLTMSFINRSGETEKIQINAKSGDDIEELATYINGQTDKVTASVNEKGQLQIFM 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
DT T + ++L N ++ V+ +DT +K
Sbjct: 248 AGEDTAGTI------SFSGDLASELGMSLKGYDAVNNLNITTVGGAQQAVAVLDTAMKFV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ ++G+ +R + + + + + + R+ D D A E+T++ Q QQ++
Sbjct: 302 DSQRAELGAYQNRFNHAINNLDNIHENLAASNSRIQDTDYAKETTQMVKQQILQQVSTTI 361
Query: 436 LSIVNNSTARILSLF 450
L+ + L+L
Sbjct: 362 LAQAKQAPNLALTLL 376
>gi|1580773|emb|CAA67101.1| flagellin [Pseudomonas aeruginosa]
Length = 434
Score = 133 bits (333), Expect = 7e-29, Method: Composition-based stats.
Identities = 47/434 (10%), Positives = 118/434 (27%), Gaps = 36/434 (8%)
Query: 46 YWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERG 102
IA + + L+ + S A+ + ++ +++ I++
Sbjct: 1 GLQIANRLTNQISGLNVATRNADDDISLAQTAEGVLQQSTNILQRIRDLALQSANGSNSD 60
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
D ++Q E+ Q++L I+ ++F G L G+++ + + +
Sbjct: 61 ADRAALQKEVAAQQAELTRISDTTTFGGRKLLDGSFGTTSFQVGSNAYETIDISLQNASA 120
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
Y + +S GT + V +K+I ++ D++ I+ K
Sbjct: 121 SAIGSYQVGRNGAGTVASVAGTATASAIASGTVNLVGGGQVKNIAIAAGDSAKAIAEKMD 180
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
A + ++ + + TS S +
Sbjct: 181 GAIPNLSARARTVFTADVSGVTGGSLNFDVTVGSNTVSLAGVTSTQDLADQLNSNSSKLG 240
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL----------- 331
+ I + + + + +
Sbjct: 241 ITASINDKGVLTITSATGENVKFGAQTGTATAGQVTVKVQGSDGKFEAAAKNVVAAGTAA 300
Query: 332 ----------------------PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ + + + + + ++ +D
Sbjct: 301 TTTIVTGYVQLNSPTAYSVSGTGTQASQVFGNASAAQKSSVASVDISTADGAQNAIAVVD 360
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ A +G++ +R D + + + R+ D D A+++ LS Q Q
Sbjct: 361 NALAAIDAQRADLGAVQNRFKNTIDNLTNISENATNARSRIKDTDFAADTVVLSMNQVLQ 420
Query: 430 QLAVQALSIVNNST 443
Q L+ N
Sbjct: 421 QAGTAILAQANQLP 434
>gi|300722633|ref|YP_003711923.1| Flagellin [Xenorhabdus nematophila ATCC 19061]
gi|139522466|gb|ABO77652.1| FliC [Xenorhabdus nematophila]
gi|297629140|emb|CBJ89736.1| Flagellin [Xenorhabdus nematophila ATCC 19061]
Length = 313
Score = 133 bits (333), Expect = 7e-29, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 3/155 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I TN SA+ A L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 3 SVINTNDSALLAQNNLTKSKGILGSAIERLSSGLRINSAKDDAAGQAIANRFTANVKGLT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQ 118
+ G S + +++ + + I+ SIQ E+TQ +
Sbjct: 63 QAARNANDGISIAQTTEGALNEINNNLQRIRELTVQSENGSNSKSDLDSIQKEVTQRLEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+ I+ + FNG L D+ + + +
Sbjct: 123 IDRISTQTQFNGIKVLNGDVTEMKIQVGANDNETI 157
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 36/89 (40%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ +D + +G++ +R+ + + + + R+ DAD A E + +
Sbjct: 225 NSLDTLDKALAQVDDMRSSLGAVQNRLESTVNNLNNTVNNLSAARSRIEDADYAVEVSNM 284
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q QQ L+ N +LSL R
Sbjct: 285 SRGQILQQAGTSVLAQANQVPQTVLSLLR 313
>gi|307266872|ref|ZP_07548393.1| flagellin domain protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|306918119|gb|EFN48372.1| flagellin domain protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 618
Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats.
Identities = 50/319 (15%), Positives = 103/319 (32%), Gaps = 4/319 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N ++ + +R N +++SSGLR++ AAD+AA SI++ M++ L
Sbjct: 3 VSHNLMVLNTLENIRKNNKITLKSIEKLSSGLRINKAADDAAGLSISEKMRAQIRGLRQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAID-VMSTIKNKITAGVERG---TDSKSIQSEITQLQSQL 119
+ G S + A AG+S ++ + ++ + D + IQ EI Q++S +
Sbjct: 63 ERNVQDGISLIQTADAGLSSILEPPLQRMRELAIQAMNDTLTDEDRQKIQLEIEQMKSAI 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
DIA + FNG L +L S I S+ + +
Sbjct: 123 DDIANNTEFNGIKLLNGNLRSVIPQIPLSIEWEKSFSTDKLINSIIATNDGGFIVGGASH 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ E + + ++ + Y+ I + K N +
Sbjct: 183 KWEPEESRFWISKIDSEGNIEWEIELPKQNNYNYIYDIEKISDGNFVATARSNKYINGEY 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + I S + + + I G+++ + ++
Sbjct: 243 GENQPIVFKFDSSGNIIKQYTFAGTNSYLLAITQTINGNIIATGSANELLIMKFDQNLNF 302
Query: 300 DPGYTNSTVAKVGNTHYYV 318
Sbjct: 303 IENRFWQFPNPADCHFKGG 321
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 37/95 (38%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+E + ID+ I+ T+ K+G+ + + + + + + R+ DAD+A
Sbjct: 524 TTRDIENAILAIDSAIEKVTSERSKLGAYQNALEHVYNNLLNYEENLMASESRIRDADIA 583
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + L+ N + ++ L +
Sbjct: 584 KEIMNFVKGNILHHTSQVVLAQANQTPETVIQLLK 618
>gi|161486613|ref|NP_935285.2| flagellin [Vibrio vulnificus YJ016]
Length = 377
Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats.
Identities = 46/365 (12%), Positives = 108/365 (29%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +AM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVAAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ I + + + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTYGTKAMQIGADNGEAVMLSLKDMRSDNVMMGGVSYQAEEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + T
Sbjct: 184 KNWNVAAGDNDLTIALTDSFGNEQEIEINAKAGDDIEELATYINGQTDLVKASVGEGGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + + G T ++ + + + S
Sbjct: 244 QIFAGNNKVQGEISFSGSLAGELGLGEGKNVTVDTIDVTTVQGAQESVAIVDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D L T+ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTQLTKTQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/362 (9%), Positives = 93/362 (25%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + + + +
Sbjct: 135 NKLLNGTYGTKAMQIGADNGEAVMLSLKDMRSDNVMMGGVSYQAEEGKDKNWNVAAGDND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ S + + + T G T+ A VG
Sbjct: 195 LTIALTDSFGNEQEIEINAKAGDDIEELATYINGQTDLVKASVGEGGKLQIFAGNNKVQG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ +G + +T +E V+ +D +K + ++G+ +R
Sbjct: 255 EISFSGSLAGELGLGEGKNVTVDTIDVTTVQGAQESVAIVDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T+L+ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTQLTKTQILSQASSSILAQAKQAPNSALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|27365269|ref|NP_760797.1| flagellin [Vibrio vulnificus CMCP6]
gi|27361416|gb|AAO10324.1| Flagellin protein flaF [Vibrio vulnificus CMCP6]
Length = 377
Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats.
Identities = 46/357 (12%), Positives = 97/357 (27%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +A+ A + L L +R+SSG R++ A D+AA I+ ++S L
Sbjct: 4 TVNTNVAALVAQRHLTSATDMLNQSLERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDI 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ +++ +++ + ++Q E+T L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMNETTNILQRMRDLSLQSANGSNSYAERIALQEEMTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L GS+ I + +
Sbjct: 124 NRIAETTSFGGRKLLNGSFGSAAFQIGAASGEAVQVQLKSMRSDGIDMGGFSYIANGRAR 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + + T
Sbjct: 184 SDWQVKEGANALSMSFTNRFGETETIQINAKAGDDIEELATYINGQTDKVTASVNEEGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + T + + V T + S
Sbjct: 244 QLFMAGEETSGTLSFSGDLASELGLQLKGYDAVDNIDITSVGGAQQAVAVLDTAMKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D L + ++ D + + + +
Sbjct: 304 HRAELGAYQNRFSHAINNLDNIHENLATSNSRIQDTDYAKETTRMVKQQILQQVSTS 360
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/364 (9%), Positives = 88/364 (24%)
Query: 87 VMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
V T + + + S I + + + + +
Sbjct: 13 VAQRHLTSATDMLNQSLERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDIAVRNANDGI 72
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + + + + +S + + +
Sbjct: 73 SIMQTAEGAMNETTNILQRMRDLSLQSANGSNSYAERIALQEEMTALNDELNRIAETTSF 132
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
S A + A + + + +
Sbjct: 133 GGRKLLNGSFGSAAFQIGAASGEAVQVQLKSMRSDGIDMGGFSYIANGRARSDWQVKEGA 192
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ S S + + T G T+ A V +
Sbjct: 193 NALSMSFTNRFGETETIQINAKAGDDIEELATYINGQTDKVTASVNEEGQLQLFMAGEET 252
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
S + + L + ++ V+ +DT +K + ++G+
Sbjct: 253 SGTLSFSGDLASELGLQLKGYDAVDNIDITSVGGAQQAVAVLDTAMKYVDSHRAELGAYQ 312
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + + + + + R+ D D A E+TR+ Q QQ++ L+
Sbjct: 313 NRFSHAINNLDNIHENLATSNSRIQDTDYAKETTRMVKQQILQQVSTSILAQAKKGPNLA 372
Query: 447 LSLF 450
L+L
Sbjct: 373 LTLL 376
>gi|260767760|ref|ZP_05876695.1| flagellin protein FlaD [Vibrio furnissii CIP 102972]
gi|260617269|gb|EEX42453.1| flagellin protein FlaD [Vibrio furnissii CIP 102972]
gi|315179408|gb|ADT86322.1| Flagellin C [Vibrio furnissii NCTC 11218]
Length = 377
Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats.
Identities = 46/357 (12%), Positives = 100/357 (28%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG R++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNSATGAQQSSMERLSSGFRINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSSNGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + N + +
Sbjct: 124 NRIAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLSLNNMRSDNRMMGGTSYKAENGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + T
Sbjct: 184 KDWSVQSGANDLTITLNDKLDGEKTIQINAKAGDDIEELATYINGQTDMIKASVDQEGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + G T + + V + S
Sbjct: 244 QLFTDNNKVDGEVSFGGSLAGELGIQEGKGVTVDTIDVTSVGGAQQSVAVVDAALKFVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D + +++ K K+ D L ++ + +
Sbjct: 304 HRAELGAFQNRFNHAVNNLDNINENVNASKSRIKDTDFAKETTALTKSQILGQASSS 360
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/347 (8%), Positives = 86/347 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N T + + S I + + + N ++ +
Sbjct: 15 QRYLNSATGAQQSSMERLSSGFRINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + + +S + + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSSNGSNSKAERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + N + + + +
Sbjct: 135 NKLLNGTFATKSFQIGADNGEAVMLSLNNMRSDNRMMGGTSYKAENGKDKDWSVQSGAND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + + T G T+ A V
Sbjct: 195 LTITLNDKLDGEKTIQINAKAGDDIEELATYINGQTDMIKASVDQEGKLQLFTDNNKVDG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ +G + +T ++ V+ +D +K + ++G+ +R
Sbjct: 255 EVSFGGSLAGELGIQEGKGVTVDTIDVTSVGGAQQSVAVVDAALKFVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ + + + + V R+ D D A E+T L+ Q Q +
Sbjct: 315 FNHAVNNLDNINENVNASKSRIKDTDFAKETTALTKSQILGQASSSV 361
>gi|27365270|ref|NP_760798.1| flagellin [Vibrio vulnificus CMCP6]
gi|37679158|ref|NP_933767.1| flagellin [Vibrio vulnificus YJ016]
gi|320155654|ref|YP_004188033.1| flagellin protein FlaD [Vibrio vulnificus MO6-24/O]
gi|27361417|gb|AAO10325.1| Flagellin protein flaD [Vibrio vulnificus CMCP6]
gi|37197900|dbj|BAC93738.1| polar flagellin FlaD [Vibrio vulnificus YJ016]
gi|319930966|gb|ADV85830.1| flagellin protein FlaD [Vibrio vulnificus MO6-24/O]
Length = 377
Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats.
Identities = 46/365 (12%), Positives = 108/365 (29%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +AM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVAAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ I + + + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTYGTKAMQIGADNGEAVMLSLKDMRSDNVMMGGVSYQAEEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + T
Sbjct: 184 KNWNVAAGDNDLTIALTDSFGNEQEIEINAKAGDDIEELATYINGQTDLVKASVGEGGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + + G T ++ + + + S
Sbjct: 244 QIFAGNNKVQGEIAFSGSLAGELGLGEGKNVTVDTIDVTTVQGAQESVAIVDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D L T+ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTQLTKTQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/362 (9%), Positives = 93/362 (25%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + + + +
Sbjct: 135 NKLLNGTYGTKAMQIGADNGEAVMLSLKDMRSDNVMMGGVSYQAEEGKDKNWNVAAGDND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ S + + + T G T+ A VG
Sbjct: 195 LTIALTDSFGNEQEIEINAKAGDDIEELATYINGQTDLVKASVGEGGKLQIFAGNNKVQG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ +G + +T +E V+ +D +K + ++G+ +R
Sbjct: 255 EIAFSGSLAGELGLGEGKNVTVDTIDVTTVQGAQESVAIVDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T+L+ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTQLTKTQILSQASSSILAQAKQAPNSALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|27363696|ref|NP_759224.1| flagellin [Vibrio vulnificus CMCP6]
gi|320157098|ref|YP_004189477.1| flagellin protein FlaD [Vibrio vulnificus MO6-24/O]
gi|27359812|gb|AAO08751.1| Flagellin protein flaD [Vibrio vulnificus CMCP6]
gi|319932410|gb|ADV87274.1| flagellin protein FlaD [Vibrio vulnificus MO6-24/O]
Length = 377
Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats.
Identities = 47/365 (12%), Positives = 108/365 (29%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +AM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVAAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ EIT L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ I + + + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTYGTKAMQIGADNGEAVMLSLKDMRSDNVMMGGVSYQAEEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + T
Sbjct: 184 KNWNVAAGDNDLTIALTDSFGNEQEIEINAKAGDDIEELATYINGQTDLVKASVGEGGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + + G T ++ + + + S
Sbjct: 244 QIFAGNNKVQGEIAFSGSLAGELGLGEGKNVTVDTIDVTTVQGAQESVAIVDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D L T+ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTQLTKTQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/362 (9%), Positives = 93/362 (25%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + + + +
Sbjct: 135 NKLLNGTYGTKAMQIGADNGEAVMLSLKDMRSDNVMMGGVSYQAEEGKDKNWNVAAGDND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ S + + + T G T+ A VG
Sbjct: 195 LTIALTDSFGNEQEIEINAKAGDDIEELATYINGQTDLVKASVGEGGKLQIFAGNNKVQG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ +G + +T +E V+ +D +K + ++G+ +R
Sbjct: 255 EIAFSGSLAGELGLGEGKNVTVDTIDVTTVQGAQESVAIVDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T+L+ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTQLTKTQILSQASSSILAQAKQAPNSALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|320155653|ref|YP_004188032.1| flagellin protein FlaF [Vibrio vulnificus MO6-24/O]
gi|319930965|gb|ADV85829.1| flagellin protein FlaF [Vibrio vulnificus MO6-24/O]
Length = 377
Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats.
Identities = 46/357 (12%), Positives = 97/357 (27%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +A+ A + L L +R+SSG R++ A D+AA I+ ++S L
Sbjct: 4 TVNTNVAALVAQRHLTSATDMLNQSLERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDI 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ +++ +++ + ++Q E+T L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMNETTNILQRMRDLSLQSANGSNSHAERIALQEEMTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L GS+ I + +
Sbjct: 124 NRIAETTSFGGRKLLNGSFGSAAFQIGAASGEAVQVQLKSMRSDGIDMGGFSYIANGRAR 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + + T
Sbjct: 184 SDWQVKEGANALSMSFTNRFGETETIQINAKAGDDIEELATYINGQTDKVTASVNEEGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + T + + V T + S
Sbjct: 244 QLFMAGEETSGTLSFSGDLASELGLQLKGYDAVDNIDITSVGGAQQAVAVLDTAMKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D L + ++ D + + + +
Sbjct: 304 HRAELGAYQNRFSHAINNLDNIHENLATSNSRIQDTDYAKETTRMVKQQILQQVSTS 360
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/364 (9%), Positives = 88/364 (24%)
Query: 87 VMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
V T + + + S I + + + + +
Sbjct: 13 VAQRHLTSATDMLNQSLERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDIAVRNANDGI 72
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + + + + +S + + +
Sbjct: 73 SIMQTAEGAMNETTNILQRMRDLSLQSANGSNSHAERIALQEEMTALNDELNRIAETTSF 132
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
S A + A + + + +
Sbjct: 133 GGRKLLNGSFGSAAFQIGAASGEAVQVQLKSMRSDGIDMGGFSYIANGRARSDWQVKEGA 192
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ S S + + T G T+ A V +
Sbjct: 193 NALSMSFTNRFGETETIQINAKAGDDIEELATYINGQTDKVTASVNEEGQLQLFMAGEET 252
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
S + + L + ++ V+ +DT +K + ++G+
Sbjct: 253 SGTLSFSGDLASELGLQLKGYDAVDNIDITSVGGAQQAVAVLDTAMKYVDSHRAELGAYQ 312
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + + + + + R+ D D A E+TR+ Q QQ++ L+
Sbjct: 313 NRFSHAINNLDNIHENLATSNSRIQDTDYAKETTRMVKQQILQQVSTSILAQAKKGPNLA 372
Query: 447 LSLF 450
L+L
Sbjct: 373 LTLL 376
>gi|315185642|gb|EFU19410.1| flagellin domain protein [Spirochaeta thermophila DSM 6578]
Length = 290
Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 77/203 (37%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ A ++ + +++ +++SSGLR++ A+D+A+ ++++ M+S L
Sbjct: 3 INHNISALFAHRQNKFNGIDMDKSMEKLSSGLRINRASDDASGLAVSEKMRSQIRGLRQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + A+ + D++ ++ D IQ E++QL ++
Sbjct: 63 ERNAADGISFIQTAEGYLQDIQDILQRLRELAVQAANGIYSDEDRMQIQVEVSQLVDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG N L T + F N + + + + + S+
Sbjct: 123 RIASHAQFNGMNLLTGRFARETGENVVTASMWFHIGANMDQRERVYIGTMTAQGLGIQST 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
+
Sbjct: 183 NGLPHTASFFTLGTPEDANRAIG 205
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 43/141 (30%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ +++ + T + A+ + ID
Sbjct: 150 TASMWFHIGANMDQRERVYIGTMTAQGLGIQSTNGLPHTASFFTLGTPEDANRAIGLIDK 209
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ +G+ +R+ + + + ++ R+ DADMA+E Q Q
Sbjct: 210 ALLKVNKQRADLGAYQNRLEYSRKSLSIGAENLQAAESRIRDADMAAEMVEYVKKQILIQ 269
Query: 431 LAVQALSIVNNSTARILSLFR 451
+ L+ N +L L R
Sbjct: 270 TSTAMLAQANQKPQSVLELLR 290
>gi|46093545|dbj|BAD14961.1| flagellin [Escherichia coli]
Length = 529
Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats.
Identities = 52/370 (14%), Positives = 100/370 (27%), Gaps = 4/370 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ LS
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +S+ + + ++ SIQ EITQ S++
Sbjct: 64 ASRNANDGISLAQTTEGALSEINNNLQRVRELAVQATNGTNSQSDLNSIQDEITQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+++ + FNG L T+ + + + + T + + +
Sbjct: 124 DRVSQQTQFNGVKVLATNQTMK-IQVGANDGQTIEIGLDKIDADTLGLKDFSVASAKVPT 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + + F + T
Sbjct: 183 SGAVALKSEMSPTLTSVNATTGKNGTNYAFGATFRTDDVNTYFGGKAVNTGDKTNVLGTE 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ I A T+ S K + I +
Sbjct: 243 AEVFQIQVEGQTYFVAQNGDTATNAYSLLKQSGSGYEKVTVDSKAVQIANFGGRVTAFVD 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
D ++ ++ S + V + +
Sbjct: 303 DGTAAHNALSVDLQKGTVGKALSFNDSQMSVYVDGKNLEIKQVLDADGKPKAGAFAAQTA 362
Query: 360 AMEEMVSFID 369
+ + ID
Sbjct: 363 DGKSLAVNID 372
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 45/403 (11%), Positives = 116/403 (28%), Gaps = 7/403 (1%)
Query: 54 KSDNGALSAVSDA----IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE-RGTDSKSI 108
++ + ++ I +G++ + G+ K +K+ A + + + ++
Sbjct: 129 QTQFNGVKVLATNQTMKIQVGANDGQTIEIGLDKIDADTLGLKDFSVASAKVPTSGAVAL 188
Query: 109 QSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
+SE++ + + + N + + + + +
Sbjct: 189 KSEMSPTLTSVNATTGKNGTNYAFGATFRTDDVNTYFGGKAVNTGDKTNVLGTEAEVFQI 248
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
++ +T + + D L + E + V + + G ++
Sbjct: 249 QVEGQTYFVAQNGDTATNAYSLLKQSGSGYEKVTVDSKAVQIANFGGRVTAFVDDGTAAH 308
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
A + A + +
Sbjct: 309 NALSVDLQKGTVGKALSFNDSQMSVYVDGKNLEIKQVLDADGKPKAGAFAAQTADGKSLA 368
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR 348
V + + + V V + T D G V ++ T
Sbjct: 369 VNIDGNGNTSVVKDADGNNVEWVVDKDGAAKTVVRKDDKIYGASVTGFGGTPTVNVDTTA 428
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
++ + + + + +DT + +G++ +R + + +
Sbjct: 429 IDASEL--KGMTTAKPLEKLDTALAKVDKLRSSLGAVQNRFDSAITNLGNTVNNLSSARS 486
Query: 409 RLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D+D A+E + +S Q QQ L+ N +T +LSL R
Sbjct: 487 RIEDSDYATEVSNMSRAQILQQAGTSVLAQANQTTQNVLSLLR 529
>gi|209695752|ref|YP_002263682.1| flagellin [Aliivibrio salmonicida LFI1238]
gi|208009705|emb|CAQ80009.1| flagellin subunit B [Aliivibrio salmonicida LFI1238]
Length = 377
Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats.
Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 3/183 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L +L +R+SSG R++ A D+AA I+ +++ L
Sbjct: 4 TVNTNVSAMTAQRYLNQATDHLNQSMERLSSGKRINSAKDDAAGLQISNRLQAQMSGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQL 119
G S A+ M+++ +++ +++ D ++IQ E L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNESTNILQRMRDLALQSSNGSNALQDRQAIQEESDALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ST I + + T + + +
Sbjct: 124 NRIAETTSFGGRRLLNGQFGTSTFQIGANAGEAVQLTLGSMRSDTLAMGGFNYTSQNQLN 183
Query: 180 STD 182
Sbjct: 184 KGW 186
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/362 (9%), Positives = 85/362 (23%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N+ T + + + S I + + + + +
Sbjct: 15 QRYLNQATDHLNQSMERLSSGKRINSAKDDAAGLQISNRLQAQMSGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + + ++ D D +
Sbjct: 75 AQTAEGAMNESTNILQRMRDLALQSSNGSNALQDRQAIQEESDALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
++ A A + + T +
Sbjct: 135 RRLLNGQFGTSTFQIGANAGEAVQLTLGSMRSDTLAMGGFNYTSQNQLNKGWTVPEGRQT 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ S + + + T G ++ A V + + L S
Sbjct: 195 LTLSFNDKEGKAQEITIEAKAGDDIEELATYINGQNDTVQASVDDNGQLQLFTAGDLVSS 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
S V + N ++ ++ +D + +G+ +R
Sbjct: 255 AVTFGGTLSAELAVGGAVFDTVNDLDLTSVGGSQKAIATLDAALGFVDQERATLGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + + R+ D D A E+ + Q QQ++ L+ S L
Sbjct: 315 FGHAINNLNNIHENIASSNSRIEDTDFAKETVEMMKAQILQQVSSTILAQAKQSPDIALK 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|148976402|ref|ZP_01813108.1| flagellin [Vibrionales bacterium SWAT-3]
gi|145964225|gb|EDK29481.1| flagellin [Vibrionales bacterium SWAT-3]
Length = 378
Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 72/183 (39%), Gaps = 3/183 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +L +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 NVSTNVSAMTAQRYLNKASNDLATSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M+++ +V+ +++ + ++ E LQ +L
Sbjct: 64 AMRNANDGISIAQTAEGAMNESTNVLQRMRDLAIQSSNGTNSPAERTALNEESMALQDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G ++ I + + I ++
Sbjct: 124 NRIAETTSFGGRRLLNGSFGEASFQIGSNSGEAMIMALTSIRADDYRMGGTTFDSENAKD 183
Query: 180 STD 182
Sbjct: 184 KNW 186
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 43/106 (40%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ + +S ID+ +K + +G+ +R+ + + +++ V+
Sbjct: 273 RATSVQDISLTSVAGSQNAISVIDSALKYVDSQRADLGAKQNRLSHSINNLANVQENVDA 332
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D D A E+T+++ Q QQ L+ +SL +
Sbjct: 333 SNSRIKDTDFAKETTQMTKSQILQQAGTSILAQAKQLPNSAMSLLQ 378
>gi|307718755|ref|YP_003874287.1| flagellar filament 33 kDa core protein, class B [Spirochaeta
thermophila DSM 6192]
gi|306532480|gb|ADN02014.1| flagellar filament 33 kDa core protein, class B [Spirochaeta
thermophila DSM 6192]
Length = 290
Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 77/203 (37%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ A ++ + +++ +++SSGLR++ A+D+A+ ++++ M+S L
Sbjct: 3 INHNISALFAHRQNKFNGIDMDKSMEKLSSGLRINRASDDASGLAVSEKMRSQIRGLRQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + A+ + D++ ++ D IQ E++QL ++
Sbjct: 63 ERNAADGISFIQTAEGYLQDIQDILQRLRELAVQAANGIYSDEDRMQIQVEVSQLVDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG N L T + F N + + + + + S+
Sbjct: 123 RIASHAQFNGMNLLTGRFARETGENVVTASMWFHIGANMDQRERVYIGTMTAQGLGIQST 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
+
Sbjct: 183 NGLPHTASFFTLGTPEDANRAIG 205
Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 43/141 (30%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ +++ + T + A+ + ID
Sbjct: 150 TASMWFHIGANMDQRERVYIGTMTAQGLGIQSTNGLPHTASFFTLGTPEDANRAIGLIDK 209
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ +G+ +R+ + + + ++ R+ DADMA+E Q Q
Sbjct: 210 ALLKVNKQRADLGAYQNRLEYARKSLSIGAENLQAAESRIRDADMAAEMVEYVKKQILIQ 269
Query: 431 LAVQALSIVNNSTARILSLFR 451
+ L+ N +L L R
Sbjct: 270 TSTAMLAQANQKPQSVLELLR 290
>gi|37680677|ref|NP_935286.1| flagellin [Vibrio vulnificus YJ016]
gi|37199426|dbj|BAC95257.1| polar flagellin FlaF [Vibrio vulnificus YJ016]
Length = 377
Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats.
Identities = 46/357 (12%), Positives = 97/357 (27%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +A+ A + L L +R+SSG R++ A D+AA I+ ++S L
Sbjct: 4 TVNTNVAALVAQRHLTSATDMLNQSLERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDI 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ +++ +++ + ++Q E+T L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMNETTNILQRMRDLSLQSANGSNSHAERIALQEEMTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L GS+ I + +
Sbjct: 124 NRIAETTSFGGRKLLNGSFGSAAFQIGGASGEAVQVQLKSMRSDGIDMGGFSYIANERAR 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + + T
Sbjct: 184 SDWQVKEGANALSMSFTNRFGETETIQINAKAGDDIEELATYINGQTDKVTASVNEEGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + T + + V T + S
Sbjct: 244 QLFMAGEETSGTLSFSGDLASELGLQLKGYDAVDNIDITSVGGAQQAVAVLDTAMKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D L + ++ D + + + +
Sbjct: 304 HRAELGAYQNRFSHAINNLDNIHENLATSNSRIQDTDYAKETTRMVKQQILQQVSTS 360
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/364 (9%), Positives = 87/364 (23%)
Query: 87 VMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
V T + + + S I + + + + +
Sbjct: 13 VAQRHLTSATDMLNQSLERLSSGKRINSAKDDAAGLQISNRLQSQMRGLDIAVRNANDGI 72
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + + + + +S + + +
Sbjct: 73 SIMQTAEGAMNETTNILQRMRDLSLQSANGSNSHAERIALQEEMTALNDELNRIAETTSF 132
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
S + A + + + +
Sbjct: 133 GGRKLLNGSFGSAAFQIGGASGEAVQVQLKSMRSDGIDMGGFSYIANERARSDWQVKEGA 192
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ S S + + T G T+ A V +
Sbjct: 193 NALSMSFTNRFGETETIQINAKAGDDIEELATYINGQTDKVTASVNEEGQLQLFMAGEET 252
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
S + + L + ++ V+ +DT +K + ++G+
Sbjct: 253 SGTLSFSGDLASELGLQLKGYDAVDNIDITSVGGAQQAVAVLDTAMKYVDSHRAELGAYQ 312
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + + + + + R+ D D A E+TR+ Q QQ++ L+
Sbjct: 313 NRFSHAINNLDNIHENLATSNSRIQDTDYAKETTRMVKQQILQQVSTSILAQAKKGPNLA 372
Query: 447 LSLF 450
L+L
Sbjct: 373 LTLL 376
>gi|197285479|ref|YP_002151351.1| flagellin 1 [Proteus mirabilis HI4320]
gi|227355970|ref|ZP_03840362.1| flagellin 1 [Proteus mirabilis ATCC 29906]
gi|194682966|emb|CAR43381.1| flagellin 1 [Proteus mirabilis HI4320]
gi|227163958|gb|EEI48860.1| flagellin 1 [Proteus mirabilis ATCC 29906]
Length = 363
Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 63/154 (40%), Gaps = 3/154 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN+ ++ L L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNYLSLVTQNNLNKSQGTLGSAIERLSSGLRINSAKDDAAGQAIANRFTSNVNGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + I+ +D SIQ+E+ + ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRIRELTVQAKNGTNSNSDITSIQNEVKERLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
I+ + FNG L + + + +
Sbjct: 124 NRISEQTQFNGVKVLSGEKSEMVIQVGTNDNETI 157
Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 44/113 (38%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
++ ++ ++ +D I + K+G+I +R + +
Sbjct: 251 FTGAKTTEFTADAGKDVKTLNVKDDALATLDKAINTIDESRSKLGAIQNRFESTINNLNN 310
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R++DAD A+E + +S Q QQ L+ N +LSL R
Sbjct: 311 TVNNLSASRSRILDADYATEVSNMSRGQILQQAGTSVLAQANQVPQTVLSLLR 363
>gi|160903242|ref|YP_001568823.1| flagellin domain-containing protein [Petrotoga mobilis SJ95]
gi|160360886|gb|ABX32500.1| flagellin domain protein [Petrotoga mobilis SJ95]
Length = 388
Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + + +N ++ +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNISALNAWRSMDQVNQSMGKTLEKLSSGLRINRAGDDAAGLAISEKMRGQIKGLDTA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ D IQ E+ QL+ ++
Sbjct: 63 VKNAQDSISLIQTAEGALTETHSILQRMRELSVQAASDTNTNVDRNQIQLELDQLREEID 122
Query: 121 DIARGSSFNGENWLRT 136
I+R + FN L
Sbjct: 123 RISRTTEFNTMKLLDG 138
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 43/374 (11%), Positives = 108/374 (28%), Gaps = 2/374 (0%)
Query: 80 GMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
M + M K+++ + R D + + +++ Q++ + ++
Sbjct: 15 SMDQVNQSMGKTLEKLSSGLRINRAGDDAAGLAISEKMRGQIKGLDTAVKNAQDSISLIQ 74
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ S++ T + + + LD + +R + +K
Sbjct: 75 TAEGALTETHSILQRMRELSVQAASDTNTNVDRNQIQLELDQLREEIDRISRTTEFNTMK 134
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ ++ S T + SG+ + + T L
Sbjct: 135 LLDGKIESFRGSEDIKVVTGGNINVEAGLISGSTAVEGTYVVEVGQLSGTETTALDVKIT 194
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
TS + A+ + A + + +
Sbjct: 195 QITAGGQTSTIVTLGAGAATIGGISFKWESSTFAISDFGGSLPKNEIVDSAVVRVEAANT 254
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
+ + + M + + ++ ++ + E + +D I +
Sbjct: 255 AANQLVLQIGANEGHNIVLGIDDMSSKALGLTEDSLKATDQDSAERSIMVVDAAIHKVST 314
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
A +G++ +R+ + + + + R+ DADMA E + Q Q + L+
Sbjct: 315 ARASLGAVQNRLEHTISNLGVASENLTAAESRIRDADMAKEMMDFTKQQILLQASNAMLA 374
Query: 438 IVNNSTARILSLFR 451
N +L L R
Sbjct: 375 QANTIPQNVLQLLR 388
>gi|84388099|ref|ZP_00990995.1| flagellin [Vibrio splendidus 12B01]
gi|84377166|gb|EAP94036.1| flagellin [Vibrio splendidus 12B01]
Length = 378
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 74/183 (40%), Gaps = 3/183 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +L +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 NVSTNVSAMTAQRYLNKASNDLATSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M+++ +V+ +++ + ++ E + LQ +L
Sbjct: 64 AMRNANDGISIAQTAEGAMNESTNVLQRMRDLAIQSSNGTNSAAERTALNEESSALQDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G ++ I S + I ++
Sbjct: 124 NRIAETTSFGGRRLLNGSFGEASFQIGSSSGEAMIMGLTSVRADDFRMGGTTFDSENGKD 183
Query: 180 STD 182
+
Sbjct: 184 KSW 186
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 43/106 (40%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ + +S ID+ +K + +G+ +R+ + + +++ V+
Sbjct: 273 RATSVQDISLTSVAGSQNAISVIDSAMKYVDSQRADLGAKQNRLSHSINNLANVQENVDA 332
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D D A E+T+++ Q QQ L+ ++L +
Sbjct: 333 SNSRIKDTDFAKETTQMTKSQILQQAGTSILAQAKQLPNSAMTLLQ 378
>gi|298528054|ref|ZP_07015458.1| flagellin domain protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298511706|gb|EFI35608.1| flagellin domain protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 796
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 72/182 (39%), Gaps = 4/182 (2%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M+ I TN AM+A++ L +L R+SSGLR+ AAD+AA +I ++M++D A
Sbjct: 1 MSLVINTNMMAMNAARNLDHHYGDLATSTRRLSSGLRIDTAADDAAGLAIRELMRADIAA 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQ 116
++ G S + A + + + +K + I E Q++
Sbjct: 61 MNQGVRNANDGISAIQTADGALEVIDNKLIRMKELAEQAATGTYTTDQREIIDQEYQQMK 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+++ IA + FN L LG + K G D + D +
Sbjct: 121 AEINRIANATEFNQVKLLDGTLGEEDGNPMKLHFGPRNNDGEDFYYVNMGDATARGLDIG 180
Query: 177 LD 178
Sbjct: 181 NS 182
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/366 (10%), Positives = 93/366 (25%), Gaps = 2/366 (0%)
Query: 86 DVMSTIKNKITAGVE--RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTA 143
D + + +T + G D+ I E +++ + ++ + +
Sbjct: 429 DTLQDVMQGLTQNINEQTGLDATYIDLEDGEIKIEGQEFDDSDITFYHSESLIYEERKIS 488
Query: 144 SIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
SI+ + Y DG + + +
Sbjct: 489 SISDQLYNIDSGQTYHININGEAFTYTTEGNDNSGDVIDGLVEAINESDIYSARYIDDEI 548
Query: 204 KDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTS 263
+ D + + T+ + + V A+ T
Sbjct: 549 IINGAASSDIMVYELSSGNDVVKTTSNEEDNELQIKIDSGPLWEGAVYAIDVEASGGDTE 608
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
+ S S G G+ +
Sbjct: 609 RYEYIVQEGDDHDDVMKALAESIDLDNHVQGASFDEHKGIVIQEEGIEGDDATIFASTRL 668
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
D + P ++ ++ + + + + ID I+ +G
Sbjct: 669 EGDIEINNPSAQIGEPNIQEDAERFDSHVNDTKPTMFAQNALEEIDAAIEKKDRIRADLG 728
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
+ +R+ +++ + ++ R+ DAD+A E T+ Q Q A L+ N
Sbjct: 729 AFQNRLESTISNLQIQAENLQAAESRISDADVAYEMTQFMRNQVLSQGATAMLAQANTLP 788
Query: 444 ARILSL 449
+ L
Sbjct: 789 QMAMQL 794
>gi|157363124|ref|YP_001469891.1| flagellin domain-containing protein [Thermotoga lettingae TMO]
gi|157313728|gb|ABV32827.1| flagellin domain protein [Thermotoga lettingae TMO]
Length = 387
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 48/378 (12%), Positives = 115/378 (30%), Gaps = 5/378 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + + Y++ +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNISALNAWRSMDQTQYSMSKTLEKLSSGLRINRAGDDAAGLAISEKMRGQISGLNMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ D +Q+E+ QL+ ++
Sbjct: 63 VKNAQDAISLIQTAEGALTEVHSILQRMRELAVQAASDTNTDVDRNQVQAELDQLREEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IAR + FN L D + + + N ++ + V +
Sbjct: 123 RIARTTEFNTMKLL--DGKIESFRASPDAKVVTAGNINLQLGSVSSAAVEGTYVVEVGQL 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + A G I+ + + A
Sbjct: 181 NGTETSALDVKITLFTAGGSNSVIANITAGGAAIGNITFTWDTNVISLADFGGALPVGEV 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+A + + A G S +G + + +++
Sbjct: 241 VDSAVARVEAAVTTASQLVFQIGANEGHNMVSGIDDMRAAALGLTSTSLDVKDQDNAERT 300
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
++ + KV + + L+ + I +
Sbjct: 301 VMVIDAAIHKVSSARAQLGAVQNRLEHTISNLGVAAENLTAAESRIRDADMAKEMMQFTK 360
Query: 361 MEEMVSFIDTQIKCATAA 378
+ ++ + A
Sbjct: 361 QQILIQSSMAMLAQANTQ 378
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 43/97 (44%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ E V ID I ++A ++G++ +R+ + + + + R+ DAD
Sbjct: 291 VKDQDNAERTVMVIDAAIHKVSSARAQLGAVQNRLEHTISNLGVAAENLTAAESRIRDAD 350
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + + Q Q ++ L+ N +L L R
Sbjct: 351 MAKEMMQFTKQQILIQSSMAMLAQANTQPQTVLQLMR 387
>gi|163801835|ref|ZP_02195732.1| flagellin [Vibrio sp. AND4]
gi|163802594|ref|ZP_02196486.1| flagellin [Vibrio sp. AND4]
gi|159173677|gb|EDP58496.1| flagellin [Vibrio sp. AND4]
gi|159174343|gb|EDP59147.1| flagellin [Vibrio sp. AND4]
Length = 377
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 47/365 (12%), Positives = 113/365 (30%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + +T
Sbjct: 124 NRIAETTSFGGNKLLNGTHGTKSFQIGADNGEAVMLELKDMRSDNAQMGGQSYQTESAKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + Q + + S +
Sbjct: 184 KNWNVQEGSNDLKMTFTDNFGQEQEIDITAKAGDDIEELATYINGQQDSVKASVTEDGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + G + T + + + + S
Sbjct: 244 QMFAGNNKVTGNVDFSGGLAGELDIQDGKEVTVDTIDVTSVGGAQESVAIIDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + +D + +++ K K+ D + ++ + + +
Sbjct: 304 NRAELGAFQNRFDHAINNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/362 (9%), Positives = 90/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + +A S
Sbjct: 135 NKLLNGTHGTKSFQIGADNGEAVMLELKDMRSDNAQMGGQSYQTESAKDKNWNVQEGSND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + + + + T G +S A V +
Sbjct: 195 LKMTFTDNFGQEQEIDITAKAGDDIEELATYINGQQDSVKASVTEDGKLQMFAGNNKVTG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T +E V+ ID +K + ++G+ +R
Sbjct: 255 NVDFSGGLAGELDIQDGKEVTVDTIDVTSVGGAQESVAIIDAALKYVDSNRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T+++ Q Q + L+ + LS
Sbjct: 315 FDHAINNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILAQAKQAPNSALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|28897562|ref|NP_797167.1| flagellin [Vibrio parahaemolyticus RIMD 2210633]
gi|153840000|ref|ZP_01992667.1| polar flagellin C [Vibrio parahaemolyticus AQ3810]
gi|260364619|ref|ZP_05777221.1| A-type flagellin [Vibrio parahaemolyticus K5030]
gi|260878276|ref|ZP_05890631.1| A-type flagellin [Vibrio parahaemolyticus AN-5034]
gi|260898106|ref|ZP_05906602.1| A-type flagellin [Vibrio parahaemolyticus Peru-466]
gi|260901962|ref|ZP_05910357.1| A-type flagellin [Vibrio parahaemolyticus AQ4037]
gi|29611967|sp|Q56712|FLAC_VIBPA RecName: Full=Polar flagellin C
gi|28805774|dbj|BAC59051.1| polar flagellin FlaC [Vibrio parahaemolyticus RIMD 2210633]
gi|149746460|gb|EDM57469.1| polar flagellin C [Vibrio parahaemolyticus AQ3810]
gi|308086103|gb|EFO35798.1| A-type flagellin [Vibrio parahaemolyticus Peru-466]
gi|308090162|gb|EFO39857.1| A-type flagellin [Vibrio parahaemolyticus AN-5034]
gi|308106764|gb|EFO44304.1| A-type flagellin [Vibrio parahaemolyticus AQ4037]
gi|308115106|gb|EFO52646.1| A-type flagellin [Vibrio parahaemolyticus K5030]
gi|328473445|gb|EGF44293.1| flagellin [Vibrio parahaemolyticus 10329]
Length = 384
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 45/230 (19%), Positives = 83/230 (36%), Gaps = 3/230 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L L +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 TVSTNVSAMTAQRYLNKATNELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++A VM +++ + ++I E L +L
Sbjct: 64 AMRNANDGISIAQTAEGAMNEATSVMQRMRDLAIQSSNGTNSPAERQAINEESMALVDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G + I S + I T + + +
Sbjct: 124 NRIAETTSFGGRRLLNGSFGEAAFQIGASSGEAMIMGLTSIRADDTRMGGVTFFSEVGKG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
G + + + ++D + + +LAT
Sbjct: 184 KDWGVDPTKADLKITLPGMGEDEDGNVDDLEININAKAGDDIEELATYIN 233
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/370 (10%), Positives = 93/370 (25%), Gaps = 7/370 (1%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQL------RDIARGSSFNGENWLRTDLGSST 142
NK T + + S +I + + S + G S
Sbjct: 15 QRYLNKATNELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISI 74
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A A+ + + + + +
Sbjct: 75 AQTAEGAMNEATSVMQRMRDLAIQSSNGTNSPAERQAINEESMALVDELNRIAETTSFGG 134
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ ++ S +A+ I + ++A + + +
Sbjct: 135 RRLLNGSFGEAAFQIGASSGEAMIMGLTSIRADDTRMGGVTFFSEVGKGKDWGVDPTKAD 194
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ N + + T G ++ A V +
Sbjct: 195 LKITLPGMGEDEDGNVDDLEININAKAGDDIEELATYINGQSDMINASVSEDGKLQIFVA 254
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNIT-RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ ++ + +S +D+ +K +
Sbjct: 255 HPNVQGDISISGGLASELGLSDEPVRTSVQDIDMTTVQGSQNAISVLDSALKYVDSQRAD 314
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G+ +R+ + + +++ V+ R+ D D A E+T+++ Q QQ L+
Sbjct: 315 LGAKQNRLSHSINNLANIQENVDASNSRIKDTDFAKETTQMTKAQILQQAGTSILAQAKQ 374
Query: 442 STARILSLFR 451
+SL +
Sbjct: 375 LPNSAMSLLQ 384
>gi|288941667|ref|YP_003443907.1| flagellin domain-containing protein [Allochromatium vinosum DSM
180]
gi|288897039|gb|ADC62875.1| flagellin domain protein [Allochromatium vinosum DSM 180]
Length = 704
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 60/407 (14%), Positives = 124/407 (30%), Gaps = 3/407 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L +R+SSGLR++ A D+AA +IA + S
Sbjct: 4 VINTNVMSLNAQRNLTKSQSTQGQAMERLSSGLRINSAKDDAAGSAIASRLTSQIRGFDQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S V A+ +S++ +++ ++ + ++ +E QL +L
Sbjct: 64 SVRNANDGISLVQTAEGALSESSNILQRMRELAVQSANGTYTSGNRTTLNAETQQLIKEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ ++FNG N L + + + + + +
Sbjct: 124 DRISESTNFNGLNLLDGSAQEVKLQVGAEANQTISVEISAMDSSSLGIEKTAGVGSVGRI 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T T N + ++ + AS + S+ + S A A
Sbjct: 184 GTGTTAALATTAVNQLGTGDLEINGIAIDAAVAASDSASSAAKASSAISTAAAINAKTDQ 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A + +G+ ++ S T VR S +
Sbjct: 244 TGVSAVVGETQIGGNTMATSTSATGSIILNGVTIDLSTTTDTATTRAAVVRDINLKSEQT 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+S G T D + L++ ++G + + T
Sbjct: 304 GVTAVDSGTDNGGITLVAADGRNIVLENSAGGLTAGNTGLGLAGASGNTAIATGTVTLVS 363
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ ++ A+ G+ + + A+ G
Sbjct: 364 EGNKPITISSGATGNASDVGFAEGTYNGSQVQVTSNLGANTTAMAAG 410
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/315 (10%), Positives = 87/315 (27%)
Query: 137 DLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
+ + + + N V ++ + + D + N
Sbjct: 390 NGSQVQVTSNLGANTTAMAAGNVFVNGVSVGPSYATDDTASSAGNDFSAISKAAAFNVVS 449
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
+ + + ++ + +G + + A
Sbjct: 450 DKTGVTAVVNENIAKNTTAQVTASAAVSGSINGVQITGFTTVAGAENNSLNRQALVDAIN 509
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
A T + + +++ D + + T + T
Sbjct: 510 AVSEQTGVKAIDTGEDGGTTGGGVQLIAEDGRNIVANIANGANAGFNTGAGTYVGEFTLV 569
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
T + ++ + + + + + ID ++
Sbjct: 570 SDKEIVITRGTDANISNSGFTVGEYGGGENGQSLKNVDISTVDGANKAIVAIDNALEKVN 629
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
+G++++R+ + + + R+ DAD A+E+ +LS Q Q + L
Sbjct: 630 NVRSDLGAVNNRLDFTINNLTSISQNATASRSRIEDADFAAETAKLSRSQVLTQASQAML 689
Query: 437 SIVNNSTARILSLFR 451
+ N++ ++LSL R
Sbjct: 690 AQANSAPQQVLSLLR 704
>gi|261344107|ref|ZP_05971751.1| flagellin 1 [Providencia rustigianii DSM 4541]
gi|282567698|gb|EFB73233.1| flagellin 1 [Providencia rustigianii DSM 4541]
Length = 368
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 71/205 (34%), Gaps = 3/205 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++ L L +R+SSG R++ A D+AA +IA ++ LS
Sbjct: 4 VINTNILSLTTQNNLNRSQGVLGSAIERLSSGSRINSAKDDAAGQAIANRFTANIKGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQSQL 119
S G S + +++ D + I+ +D SIQ+E+T+ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINDNLQRIRELTVQAKNGSNSNSDISSIQNEVTERLAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FNG L + + + + + T
Sbjct: 124 NRISEQTQFNGVKVLSGEKTEMSIQVGTNDKEVIKFSLDKTDNDTLGVSSDKLFEATPAG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLK 204
T + K+ V
Sbjct: 184 IKGVTAKGTADVTADKVGVTGGTTY 208
Score = 113 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 48/136 (35%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
D + D D T A D ++ ++ +D I
Sbjct: 233 GGKDYLVSNSDFEVDGTTATQVNLKAGAKEFTPSAGKDMPAGLEVKDDALATLDKAINTV 292
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ K+G+I +R + + + + R+ DAD A+E + +S Q QQ
Sbjct: 293 DESRSKLGAIQNRFQSTINNLNNSVNNLSAARSRIQDADFATEVSNMSRGQILQQAGTAV 352
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 353 LAQANQVPQGVLSLLR 368
>gi|225871806|ref|YP_002753260.1| flagellin [Acidobacterium capsulatum ATCC 51196]
gi|225794305|gb|ACO34395.1| flagellin [Acidobacterium capsulatum ATCC 51196]
Length = 426
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 63/451 (13%), Positives = 145/451 (32%), Gaps = 32/451 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+L N SA+ A L +L+ V ++SSG R++ AD+AA S+A +++++ AL+
Sbjct: 5 VLNNISALYAENNLNQTQSSLQNVLTQLSSGSRINSGADDAAGLSLANGLQANSAALTQS 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
S G + +A +S+ +++ T + + E + S++
Sbjct: 65 STNASEGVGLLQVADGALSQVTSLLNRAVTLATEASNGTLNSSQDAAANQEYQSILSEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++N + + S D+ +T+ TV SS
Sbjct: 125 NIGSTTTYNSKQVFTGAAAGVSIYTGDSSSSGSSIDNLYFAPLTSSSVGDAGGTVQQSSS 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + +T T+ + L
Sbjct: 185 GQFVDLSKDTSGALTTAATQGDAISGALKFTITNADGTTSTITTTATTVSGLIQEINKDG 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A+ A+ +G +G + +S + T +++ +
Sbjct: 245 IPGVTASFTTAGAVGLASGTVNAGDTGILLTNTNSSVAIAEGATAVTDTPTTIASTLATS 304
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + T + +T +
Sbjct: 305 TK-----------------------------GVATIDYVAASGGDTTANLSTTDLSSSAD 335
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ +S ++ I A G IG+ + ++ + ++ V ++ D AS ++
Sbjct: 336 AQNALSALNGAISDVAAQRGYIGAQINTLNAVANVETTQQENVTSAENSVMATDYASATS 395
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++S + Q + AL+ N+ + L +
Sbjct: 396 QMSKYEILSQTGISALAQANSMQQLVTKLLQ 426
>gi|268589947|ref|ZP_06124168.1| flagellin 2 [Providencia rettgeri DSM 1131]
gi|291314663|gb|EFE55116.1| flagellin 2 [Providencia rettgeri DSM 1131]
Length = 370
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 70/209 (33%), Gaps = 3/209 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++ L L +R+SSG R++ A D+AA +IA S+ L+
Sbjct: 4 VINTNILSLTTQNNLNRSQGVLGSAIERLSSGSRINSAKDDAAGQAIANRFTSNVKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ D + I+ +D SIQ+E+T+ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINDNLQRIRELTVQAKNGTNSNSDLTSIQNEVTERLAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I++ + FNG L + + + + + T
Sbjct: 124 DRISKETQFNGVKVLSGEKTDMSIQVGTNDNEVIKFKLDKVDTTELEVTSDKLFTETTTK 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+D K
Sbjct: 184 KGVTAAGSANIDAKDVGVAGGTTYKTGLT 212
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/357 (13%), Positives = 98/357 (27%)
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
+ R E S++ ++ T +++
Sbjct: 14 TQNNLNRSQGVLGSAIERLSSGSRINSAKDDAAGQAIANRFTSNVKGLTQASRNANDGIS 73
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
+ + I+ L L + +GT L E D +
Sbjct: 74 IAQTTEGALNEINDNLQRIRELTVQAKNGTNSNSDLTSIQNEVTERLAEIDRISKETQFN 133
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
G K + + + T + + + TT+ + + S
Sbjct: 134 GVKVLSGEKTDMSIQVGTNDNEVIKFKLDKVDTTELEVTSDKLFTETTTKKGVTAAGSAN 193
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
A + + + T T D Y+ T++ +
Sbjct: 194 IDAKDVGVAGGTTYKTGLTVKEYTEDGKAVPGKYVATEGGKSYLVTDADFEADGTTATQV 253
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
VT + ++ ++ +D I + ++G+I +R +
Sbjct: 254 NLKTGVAVTAREFTASAGKDVKSLDVKDDALATLDNAINKVDESRSRLGAIQNRFQSTIN 313
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + R+ DAD A+E + +S Q QQ L+ N +LSL R
Sbjct: 314 NLNNSVNNLSAARSRIQDADFATEVSNMSRGQILQQAGTAVLAQANQVPQGVLSLLR 370
>gi|262276405|ref|ZP_06054214.1| flagellin protein FlaC [Grimontia hollisae CIP 101886]
gi|262220213|gb|EEY71529.1| flagellin protein FlaC [Grimontia hollisae CIP 101886]
Length = 380
Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 47/374 (12%), Positives = 100/374 (26%), Gaps = 3/374 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L L +R+SSG R++ A D+AA I+ + + L
Sbjct: 4 TVNTNVSAMTAQRYLNKSTNELNTSMERLSSGSRINSAKDDAAGLQISNRLIAQTRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M ++ +++ +++ + +IQ E++ LQ +L
Sbjct: 64 AMRNANDGISIAQTAEGAMQESTNILQRMRDLALQSANGANGISERVAIQEEVSALQDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA ++F G L G ++ I + I + +
Sbjct: 124 NRIAETTAFGGRRLLNGSFGEASFQIGADSGEAIIMGLTSIRADDFRMGGTEFIGTSAKT 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G + + + + +
Sbjct: 184 AGWGVTAAASTLTLAFTTKDGNSINLNIDAKAGDDIEELATYINGQSDEMLTASVDDDGQ 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
Q A T+ G ++ A + +++
Sbjct: 244 LQIFIAEEKLEGNVTFGGALATSLGLVTGTGSAITAQDIDVSNVGGAQMAVGIIDSAMQY 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
AK + + S ++ I
Sbjct: 304 IDSQRADLGAKQNRLSHTISNLSNIQENVSASNSRIRDTDFAKETTELTKGQILQQASTS 363
Query: 360 AMEEMVSFIDTQIK 373
+ + +
Sbjct: 364 ILAQAKQLPQAALN 377
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/376 (11%), Positives = 102/376 (27%), Gaps = 8/376 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
A+ ++K+ + ++T ++ + + + +
Sbjct: 13 TAQRYLNKSTNELNTSMERL-----SSGSRINSAKDDAAGLQISNRLIAQTRGLDVAMRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A A+ + + + +
Sbjct: 68 ANDGISIAQTAEGAMQESTNILQRMRDLALQSANGANGISERVAIQEEVSALQDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ ++ S +AS I + ++A + + I T
Sbjct: 128 ETTAFGGRRLLNGSFGEASFQIGADSGEAIIMGLTSIRADDFRMGGTEFIGTSAKTAGWG 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A +T + + + + DI AT N + + +
Sbjct: 188 VTAAASTLTLAFTTKDGNSINLNIDAKAGDDIEELATYINGQSDEMLTASVDDDGQLQIF 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ + L + A + + V ID+ ++
Sbjct: 248 IAEEKLEGNVTFGGALATS---LGLVTGTGSAITAQDIDVSNVGGAQMAVGIIDSAMQYI 304
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ +G+ +R+ + +++ V R+ D D A E+T L+ Q QQ +
Sbjct: 305 DSQRADLGAKQNRLSHTISNLSNIQENVSASNSRIRDTDFAKETTELTKGQILQQASTSI 364
Query: 436 LSIVNNSTARILSLFR 451
L+ L+L +
Sbjct: 365 LAQAKQLPQAALNLLQ 380
>gi|239828345|ref|YP_002950969.1| flagellin [Geobacillus sp. WCH70]
gi|239808638|gb|ACS25703.1| flagellin domain protein [Geobacillus sp. WCH70]
Length = 799
Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++A + L ++ +R+SSGLR++ AAD+AA +I++ M+S L
Sbjct: 3 INHNIQALNAYRNLAANQLSVSKNLERLSSGLRINRAADDAAGLAISEKMRSQIRGLQMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ D ++IQ EI QL S++
Sbjct: 63 ERNALDAISLIQTAEGALNEVHSILQRMRELAVQAANDTNTVEDREAIQKEINQLTSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
IA + +N + L + S S+
Sbjct: 123 RIANSTEYNTKKLLNESVSSQARSV 147
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 40/358 (11%), Positives = 90/358 (25%), Gaps = 6/358 (1%)
Query: 100 ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
+ + + A + ++ +T + ++ + +
Sbjct: 441 NGSDGISYTINHNGYASTNINRTATFGIQSMLSYSTDGATFTTFNAGDNLTLNGGIFVDT 500
Query: 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
IT + + +++ T N V V+ + V + + +S
Sbjct: 501 ADNITDYTTGDTTVQIDVGTTSSYTATLVDDVGNALSGVPMLVVDNNGVYSFGSGTGVSF 560
Query: 220 KKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
L+ + + A T + V A T +G + ++ A
Sbjct: 561 TTGTLSAGTRTFTVGATVTTKATLSTNGVEVETLNNIAPNTTLRFHNGDLTMNIGALTNG 620
Query: 280 IRM------GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
N + + + + +
Sbjct: 621 EASFTITGGTTDQSLKIQIGANEGQTLSIGIDDMRSLALKLSSDTAGAIVSFQNHLGQII 680
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
N + V D I +A +G++ +R+
Sbjct: 681 TAYYASIADVNNGNSNEFALDVTTHEKAAAAVQVYDYAISRVSAQRSNLGAVQNRLEHTI 740
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +K + + R+ D DMA E + Q A L+ N IL L +
Sbjct: 741 NNLKTANENLTSAESRIRDTDMAMEMAEFTKNNILTQAAQAMLAQSNQLPQGILQLLK 798
>gi|258513978|ref|YP_003190200.1| flagellin domain-containing protein [Desulfotomaculum acetoxidans
DSM 771]
gi|257777683|gb|ACV61577.1| flagellin domain protein [Desulfotomaculum acetoxidans DSM 771]
Length = 829
Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 86/205 (41%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ +++ + + R+SSGLR++ A+D+AA SI++ M++ L
Sbjct: 3 INHNIAALNTYRQMSAASSLSQKNMSRLSSGLRINSASDDAAGLSISEKMRAQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + A+ G+++ ++ +K T D ++Q+E+ QL S++
Sbjct: 63 SKNAQDGISLLQTAEGGLTEVHSILDRMKELATQSANDTNTDKDRVALQNEMNQLTSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN L TA++ S G + +G D V ++
Sbjct: 123 RIGNTTEFNDTKVLNGGGTDPTAAVKVSGNGLTVPGMSGGEGAAEQLASADITFVTPTTA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
D ++ + + K+
Sbjct: 183 GDYKDKSFTITIGTRTLTVNTTAKN 207
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 25/322 (7%), Positives = 65/322 (20%)
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ A + + + + DD +
Sbjct: 497 IDGDAALENGKYRLISTGTVNTPALEKLNADGSWTTLDDAANAAVVVNGGATFTVNGADV 556
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + + + +G++ +A ++
Sbjct: 557 TIHLADYALTDFNTTAGADYVEFSVSTKYEAKLYEAGSVDKNGNPVAGLEVNVANGQSSV 616
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
A V + S T + +
Sbjct: 617 KLNAHDGVGEVVVNIGTFDPSKFDTLNDTITWSFETKSQTETSSEVVGGTFTTKLQIGAS 676
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ G+ + + + K + T +
Sbjct: 677 TGQGFQIDITDMRARALGVSGSTAGGNAADVKGAKYRSMQEVTNGTDNTGIEYALDISTH 736
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
++ ID I + +IG+ +R+ + + + + D +MA E
Sbjct: 737 DTATAALTVIDNAIAAVSKQRSQIGAYQNRLDHTINNLNASSQNLTTAESNIRDVNMAKE 796
Query: 419 STRLSALQTQQQLAVQALSIVN 440
+ Q L+ N
Sbjct: 797 MMEFTKNNILSQAGQAMLAQAN 818
>gi|325982826|ref|YP_004295228.1| flagellin domain-containing protein [Nitrosomonas sp. AL212]
gi|325532345|gb|ADZ27066.1| flagellin domain protein [Nitrosomonas sp. AL212]
Length = 569
Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 63/407 (15%), Positives = 132/407 (32%), Gaps = 5/407 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I +N ++++A + L +L +R+SSGLR++ A D+AA +I++ M + L+
Sbjct: 4 VINSNIASLTAQRNLNSSQSSLNTSLERLSSGLRINSAKDDAAGLAISERMSTQIRGLNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
+ G S A+ +++ + + I+ +D ++Q+E+TQL S++
Sbjct: 64 ANRNANDGISLTQTAEGALTEIGNNLQRIRELSVQASNATNTASDRAALQAEVTQLTSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ +A + FNG N L G+ + + + + +Y + + +
Sbjct: 124 QRVATQTQFNGMNLLDGSFGTFNLQVGANANQTISASSGNFQTNSFGNYRI--GGLAAFT 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + + VL + +T+
Sbjct: 182 SGGVGDLVAGTIGANSDAIGNAVLVSGTTGDASGINGAAAAGDFRISTASGNFDVYYRAG 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A IA+ + A TT G+ + S A + + N+ T
Sbjct: 242 ASAAEIASSINKTGSGVNASATTEVVLGAATGSGAGFQQNTTYSFAISTDYSDPTNANTV 301
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
DP +T + G L + + + + A
Sbjct: 302 DPKFTTISFKTGGADDASDVDSGNYLSTAIKAFNDASAKTGFTAEAVQTEDGYWAIKLSN 361
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ ++ A S S + + D + G
Sbjct: 362 TNGNDLRILNNSYDNTGTAIDITVSDISVLDGDTSTTDSLADTLAGG 408
Score = 116 bits (289), Expect = 9e-24, Method: Composition-based stats.
Identities = 40/319 (12%), Positives = 90/319 (28%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+T G + ++ + V+G+ G Q TT + + + ++ ++ +
Sbjct: 251 INKTGSGVNASATTEVVLGAATGSGAGFQQNTTYSFAISTDYSDPTNANTVDPKFTTISF 310
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + + T + + L
Sbjct: 311 KTGGADDASDVDSGNYLSTAIKAFNDASAKTGFTAEAVQTEDGYWAIKLSNTNGNDLRIL 370
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+ T + S + + + + G KV
Sbjct: 371 NNSYDNTGTAIDITVSDISVLDGDTSTTDSLADTLAGGGLDATTGVWTNGNGAWYTGKVT 430
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ +T + + + + N A + +S +D +
Sbjct: 431 LDSAQSFSVTTAVADVFQDAGTPGTAAAGTYGAQLQATNAVDVTSYDAAQRTLSIVDAAL 490
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ G++ +R+ ++ + + R+ DAD A+ES L+ Q QQ
Sbjct: 491 STVNSQRANFGALQNRLESTMSNLQSTSENLSASRSRIRDADFAAESANLTRSQILQQAG 550
Query: 433 VQALSIVNNSTARILSLFR 451
V L+ N +LSL R
Sbjct: 551 VAMLAQANQLPNNVLSLLR 569
>gi|94264908|ref|ZP_01288681.1| Flagellin-like:transferase hexapeptide repeat [delta
proteobacterium MLMS-1]
gi|93454622|gb|EAT04893.1| Flagellin-like:transferase hexapeptide repeat [delta
proteobacterium MLMS-1]
Length = 1207
Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 83/205 (40%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +AM+A ++ L +R+SSGLR++ AAD+A+ +IA +KS L
Sbjct: 5 INTNIAAMNAHNNMQRTGNALNTSLERLSSGLRINKAADDASGLAIADSLKSQAQGLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
G S V A + ++ ++++ IK K + G +IQ++I +L QL
Sbjct: 65 IRNANDGISIVQTADGALEESSNIINEIKTKAIQAAQDGQTQESRGAIQADINRLLEQLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FN + L + + I + + +
Sbjct: 125 NIAGTTAFNNQKLLSGNFTNKDFQIGAYSNETVNVSIASAESSKLGHVGESTLRFDSEGT 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ + + +R + + +
Sbjct: 185 SSLSVYSSVENRTYDLSTVEIAYDN 209
Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats.
Identities = 38/279 (13%), Positives = 80/279 (28%)
Query: 174 TVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233
+ +++ + ++L + TI+T T +
Sbjct: 929 SGTTYGDGTIMSSDSIVNEDSTFTNGAEMLTGSATVYSNGDSTITTAGDTFLTEESFLAE 988
Query: 234 AANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATT 293
+ A G + I + + S A+ T + +
Sbjct: 989 NSQAADSSTIGGSFIVQDEVTVAGEGMIVGKGAELAAGSELAAGTELTFDIVVDGEQLYA 1048
Query: 294 KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD 353
++ + V + S ++D + T +
Sbjct: 1049 AGDTLNEDYTVGAGGLTVDDNISLAAGSVIAEGSTLVAVDDVDWAETERGATTTARLSDV 1108
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ + D +K +GS+ +++ I + R +E + D
Sbjct: 1109 DVTTHEGAQRAIDIADAALKDLNKVRADLGSVQNQLTSTISNITVTRVNIEAAESGIRDV 1168
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
D A ES+ S LQ Q A++ N S+ +LSL +G
Sbjct: 1169 DFAEESSNFSRLQILSQAGSFAMAQANASSQNVLSLLQG 1207
>gi|91223535|ref|ZP_01258800.1| flagellin [Vibrio alginolyticus 12G01]
gi|269965714|ref|ZP_06179827.1| Flagellin B [Vibrio alginolyticus 40B]
gi|91191621|gb|EAS77885.1| flagellin [Vibrio alginolyticus 12G01]
gi|269829782|gb|EEZ84018.1| Flagellin B [Vibrio alginolyticus 40B]
Length = 376
Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 40/227 (17%), Positives = 83/227 (36%), Gaps = 3/227 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 NVNTNVSAMTAQRYLNQAADGQQKSMERLSSGYKINSAKDDAAGLQISNRLNAQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S +A+ M+++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVKNANDGISIAQVAEGAMNESTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + T+
Sbjct: 124 NRIAETTSFGGNKLLNGTYGTQSFQIGADSGEAVMLSMGNLRSDTSAMGGKSYAAEEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
++ ++ K + I D ++T
Sbjct: 184 ASWTVGEKTEFKMSYTNKQGEEKELSISAKQGDDIEQLATYINGQND 230
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+E V+ ID +K + +G+ +R + + + + V R+ D D
Sbjct: 280 VTTVAGSQEAVAVIDGALKSVDSQRASLGAFQNRFNHAISNLDNINENVNASKSRIKDTD 339
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A E+T ++ Q QQ + L+ S + LSL
Sbjct: 340 YAKETTAMTKSQILQQASTSILAQAKQSPSAALSLL 375
>gi|328474430|gb|EGF45235.1| flagellin [Vibrio parahaemolyticus 10329]
Length = 378
Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 45/358 (12%), Positives = 96/358 (26%), Gaps = 3/358 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQAESGKG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + Q + + T +
Sbjct: 184 KDWNVAQGKNDLKISLTDSFGQEQEININAKAGDDIEELATHINGQTDLVKASVDQDGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + K+ +V G +
Sbjct: 244 QIFAGNNKVEGEVSFSGGLSGELGLGDNKKNVTVDTIDVTSVGGAQESVAIIDAALKYVD 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
N + T + A +
Sbjct: 304 SHRAELGAFQNRFNHATSNLDNINENVNASKSRITDTDFAKETTAMTKSQILSQASSS 361
Score = 99.8 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 40/363 (11%), Positives = 92/363 (25%), Gaps = 1/363 (0%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S + + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + K + + + +
Sbjct: 135 NKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQAESGKGKDWNVAQGKND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
S+ S + N + + T G T+ A V
Sbjct: 195 LKISLTDSFGQEQEININAKAGDDIEELATHINGQTDLVKASVDQDGKLQIFAGNNKVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITR-HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+ SG + N +T +E V+ ID +K + ++G+ +
Sbjct: 255 EVSFSGGLSGELGLGDNKKNVTVDTIDVTSVGGAQESVAIIDAALKYVDSHRAELGAFQN 314
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
R + + + + V R+ D D A E+T ++ Q Q + L+ + L
Sbjct: 315 RFNHATSNLDNINENVNASKSRITDTDFAKETTAMTKSQILSQASSSILAQAKQAPNSAL 374
Query: 448 SLF 450
SL
Sbjct: 375 SLL 377
>gi|1169696|sp|P42272|FLIC1_PROMI RecName: Full=Flagellin 1
gi|150886|gb|AAA62396.1| FlaA [Proteus mirabilis]
Length = 365
Score = 132 bits (330), Expect = 2e-28, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 63/154 (40%), Gaps = 3/154 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN+ ++ L L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNYLSLVTQNNLNKSQGTLGSAIERLSSGLRINSAKDDAAGQAIANRFTSNVNGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + I+ +D SIQ+E+ + ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRIRELTVQAKNGTNSNSDITSIQNEVKNVLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
I+ + FNG L + + + +
Sbjct: 124 NRISEQTQFNGVKVLSGEKSEMVIQVGTNDNETI 157
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 61/214 (28%)
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
++ V A + T K AA A + S+
Sbjct: 152 NDNETIKFNLDKVDNDTLGVASDKLFDTKTEKKGVTAAGAGVTDAKKINAAATLDMMVSL 211
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ V T + G +
Sbjct: 212 VKEFNLDGKPVTDKFIVTKGGKDYVATKSDFELDATGTKLGLKASATTEFKVDAGKDVKT 271
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
++ ++ +D I + K+G+I +R + + + + R++DAD A+
Sbjct: 272 LNVKDDALATLDKAINTIDESRSKLGAIQNRFESTINNLNNTVNNLSASRSRILDADYAT 331
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + +S Q QQ L+ N +LSL R
Sbjct: 332 EVSNMSRGQILQQAGTSVLAQANQVPQTVLSLLR 365
>gi|172087731|ref|YP_205245.3| flagellin [Vibrio fischeri ES114]
gi|59480570|gb|AAW86357.1| Flagellin FlaE [Vibrio fischeri ES114]
Length = 398
Score = 132 bits (330), Expect = 2e-28, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 84/221 (38%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + + L
Sbjct: 24 TVNTNVSAMTAQRYLNSATDGVNQSMERLSSGSKINSAKDDAAGLQISNRLNTQTRGLDV 83
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S + A+ M + +++S +++ D ++IQ E+T L ++
Sbjct: 84 AVRNANDGISMMQTAEGAMKETSNILSRVRDLALQSSNGSNTDADRQAIQQEVTALSDEM 143
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + G+ + + + + N +
Sbjct: 144 NRIAETTSFGGTRLLNGNFGTKSFQVGADSGEAVMLTLNNLRADEANMGGKTFTASEGVA 203
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ + + K + +I+ D ++T
Sbjct: 204 AGWTAGKDANMTITIADKNGEEQAIEINAKAGDDIEEVATY 244
Score = 106 bits (263), Expect = 9e-21, Method: Composition-based stats.
Identities = 35/364 (9%), Positives = 87/364 (23%), Gaps = 1/364 (0%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N T GV + + S S+I + + + N + +
Sbjct: 35 QRYLNSATDGVNQSMERLSSGSKINSAKDDAAGLQISNRLNTQTRGLDVAVRNANDGISM 94
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + ++ + + ++ D +
Sbjct: 95 MQTAEGAMKETSNILSRVRDLALQSSNGSNTDADRQAIQQEVTALSDEMNRIAETTSFGG 154
Query: 209 SVYDASGTISTKKFKLATTSGAWL-KAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
+ + A + A + N D+A A +
Sbjct: 155 TRLLNGNFGTKSFQVGADSGEAVMLTLNNLRADEANMGGKTFTASEGVAAGWTAGKDANM 214
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
+ + + N+ + + S +
Sbjct: 215 TITIADKNGEEQAIEINAKAGDDIEEVATYINGQTDKVSASVGEDGKLQVFAAKDVAEGE 274
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+ + V+ +D +K + ++G+ +
Sbjct: 275 ISFSGALAKETGMADAEVANKTVGNIDVTTVAGSQNAVAVVDAAMKFVDSHRSELGAAQN 334
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
R+ + + + V ++ D D A E+T ++ Q QQ + L+ + L
Sbjct: 335 RMGHTISNLDNINENVSASKSQIKDVDFAKETTEMTKSQILQQASSSILAQAKQAPNAAL 394
Query: 448 SLFR 451
L R
Sbjct: 395 GLLR 398
>gi|254230132|ref|ZP_04923527.1| flagellin [Vibrio sp. Ex25]
gi|262394931|ref|YP_003286785.1| flagellin protein FlaC [Vibrio sp. Ex25]
gi|151937325|gb|EDN56188.1| flagellin [Vibrio sp. Ex25]
gi|262338525|gb|ACY52320.1| flagellin protein FlaC [Vibrio sp. Ex25]
Length = 384
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 45/230 (19%), Positives = 82/230 (35%), Gaps = 3/230 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L L +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 TVSTNVSAMTAQRYLNKATDELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++A VM +++ + ++I E L +L
Sbjct: 64 AMRNANDGISIAQTAEGAMNEATSVMQRMRDLAIQSSNGTNSPAERQAINEESMALIDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G + I S + I T + +
Sbjct: 124 NRIAETTSFGGRRLLNGSFGEAAFQIGASSGEAMIMGLTSIRADDTRMGGVTFLSENGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
G + + + ++D + + +LAT
Sbjct: 184 KDWGVDPAKSDLKITLPGMGEDEDGNVDDLEININAKAGDDIEELATYIN 233
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/370 (10%), Positives = 95/370 (25%), Gaps = 7/370 (1%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQL------RDIARGSSFNGENWLRTDLGSST 142
NK T + + S +I + + S + G S
Sbjct: 15 QRYLNKATDELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISI 74
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A A+ + + + + +
Sbjct: 75 AQTAEGAMNEATSVMQRMRDLAIQSSNGTNSPAERQAINEESMALIDELNRIAETTSFGG 134
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ ++ S +A+ I + ++A + ++ +
Sbjct: 135 RRLLNGSFGEAAFQIGASSGEAMIMGLTSIRADDTRMGGVTFLSENGKDKDWGVDPAKSD 194
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ N + + T G ++ A V +
Sbjct: 195 LKITLPGMGEDEDGNVDDLEININAKAGDDIEELATYINGQSDMINASVSEDGKLQVFVA 254
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNIT-RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ + ++ + +S +D+ +K +
Sbjct: 255 HPNVQGEISISGGLASELGLSDEPLRTSVQDIDMTTVQGSQNAISVLDSALKYVDSQRAD 314
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G+ +R+ + + +++ V+ R+ D D A E+T+++ Q QQ L+
Sbjct: 315 LGAKQNRLSHSINNLANIQENVDASNSRIKDTDFAKETTQMTKAQILQQAGTSILAQAKQ 374
Query: 442 STARILSLFR 451
+SL +
Sbjct: 375 LPNSAMSLLQ 384
>gi|551519|gb|AAD10271.1| polar flagellin [Vibrio parahaemolyticus]
Length = 384
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 45/230 (19%), Positives = 83/230 (36%), Gaps = 3/230 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L L +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 TVSTNVSAMTAQRYLNKATNELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++A VM +++ + ++I E L +L
Sbjct: 64 AMRNANDGISIAQTAEGAMNEATSVMQRMRDLAIQSSNGTNSPAERQAINEESMALVDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G + I S + I T + + +
Sbjct: 124 NRIAETTSFGGRRLLNGSFGEAAFQIGASSGEAMIMGLTSIRADDTRMGGVTFFSEVGKG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
G + + + ++D + + +LAT
Sbjct: 184 KDWGVDPTKADLKITLPGMGEDEDGNVDDLEININAKAGDDIEELATYIN 233
Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/370 (10%), Positives = 93/370 (25%), Gaps = 7/370 (1%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQL------RDIARGSSFNGENWLRTDLGSST 142
NK T + + S +I + + S + G S
Sbjct: 15 QRYLNKATNELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISI 74
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A A+ + + + + +
Sbjct: 75 AQTAEGAMNEATSVMQRMRDLAIQSSNGTNSPAERQAINEESMALVDELNRIAETTSFGG 134
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ ++ S +A+ I + ++A + + +
Sbjct: 135 RRLLNGSFGEAAFQIGASSGEAMIMGLTSIRADDTRMGGVTFFSEVGKGKDWGVDPTKAD 194
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ N + + T G ++ A V +
Sbjct: 195 LKITLPGMGEDEDGNVDDLEININAKAGDDIEELATYINGQSDMINASVSEDGKLQIFVA 254
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNIT-RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ ++ + +S +D+ +K +
Sbjct: 255 HPNVQGDISISGGLASELGLSDQPVRTSVQDIDMTTVQGSQNAISVLDSALKYVDSQRAD 314
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G+ +R+ + + +++ V+ R+ D D A E+T+++ Q QQ L+
Sbjct: 315 LGAKQNRLSHSINNLANIQENVDASNSRIKDTDFAKETTQMTKAQILQQAGTSILAQAKQ 374
Query: 442 STARILSLFR 451
+SL +
Sbjct: 375 LPNSAMSLLQ 384
>gi|312884922|ref|ZP_07744612.1| flagellin [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367399|gb|EFP94961.1| flagellin [Vibrio caribbenthicus ATCC BAA-2122]
Length = 378
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 44/319 (13%), Positives = 91/319 (28%), Gaps = 3/319 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L N + +R+SSG +++ A D+AA I+ + + LS
Sbjct: 4 NVNTNVSAMTAQRYLNKANDAQQTSMERLSSGFKINSAKDDAAGMQISNRLNVQSRGLSV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M ++ +++ I++ + ++Q E+T L +L
Sbjct: 64 AVRNANDGISITQTAEGAMDESTNILQRIRDLSLQSANGSNSLSERVALQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + N +
Sbjct: 124 NRIAETTSFGGNRLLNGTYSTKSFQIGADNGEAVMLTLNDMRSDNVGMGGKSYLATTEKN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
E + + + + +S +
Sbjct: 184 KDWTVEAGTDTFIMKFKDNDGKDQEINITAKEGDDIEEVATYINGQNSSVKASVSDKGRL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + + + +V G + T +
Sbjct: 244 QIFAGSNKVDGEVAFSGTLAADLNLPAAGTDVTVHTIDITTVGGAQEAVAIVDTALNYVD 303
Query: 300 DPGYTNSTVAKVGNTHYYV 318
N
Sbjct: 304 SHRAELGAFQNRFNHAISN 322
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/385 (11%), Positives = 100/385 (25%), Gaps = 11/385 (2%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++KA D T ++++G + + +
Sbjct: 4 NVNTNVSAM-TAQRYLNKANDAQQTSMERLSSGFKINSAKDDAAGMQIS-----NRLNVQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A+ + ++ + +
Sbjct: 58 SRGLSVAVRNANDGISITQTAEGAMDESTNILQRIRDLSLQSANGSNSLSERVALQEEVT 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
+ ++ + S I + + +++ N +
Sbjct: 118 ALNDELNRIAETTSFGGNRLLNGTYSTKSFQIGADNGEAVMLTLNDMRSDNVGMGGKSYL 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
AT A T + DI AT N S +
Sbjct: 178 ATTEKNKDWTVEAGTDTFIMKFKDNDGKDQEINITAKEGDDIEEVATYINGQNSSVKASV 237
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
S ++ + S T +E V
Sbjct: 238 SDKGRLQIFAGSNKVDGEVAFSGTLAADLNLPAAGTDVTVHTI-----DITTVGGAQEAV 292
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ +DT + + ++G+ +R + + + + V R+ D D A E+T L+
Sbjct: 293 AIVDTALNYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTSLTKS 352
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q Q + L+ + L+L
Sbjct: 353 QILSQSSSSILAQAKQTPTAALNLL 377
>gi|253990088|ref|YP_003041444.1| flagellin [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
gi|253781538|emb|CAQ84701.1| flagellin (flic) [Photorhabdus asymbiotica]
Length = 357
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 59/151 (39%), Gaps = 3/151 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLTKSQGTLGNAIERLSSGLRINSAKDDAAGQAIANRFTANVRGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
+ G S + +++ + I+ SIQ E+TQ ++
Sbjct: 64 AARNANDGISIAQTTEGALNEINTNLQRIRELTVQAQNESNSESDIKSIQEEVTQRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVI 150
I+ + FNG LR D + A
Sbjct: 124 DRISEQTQFNGVRVLREDNKMTIQVGANDNE 154
Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/358 (11%), Positives = 96/358 (26%), Gaps = 1/358 (0%)
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
+ + + S Q+ +T+ Q L + A +G ++ +IA +
Sbjct: 1 MAQVINTNSLSLLTQNNLTKSQGTLGN-AIERLSSGLRINSAKDDAAGQAIANRFTANVR 59
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
L+ +R L + + +
Sbjct: 60 GLTQAARNANDGISIAQTTEGALNEINTNLQRIRELTVQAQNESNSESDIKSIQEEVTQR 119
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ + +G + + G V +
Sbjct: 120 LDEIDRISEQTQFNGVRVLREDNKMTIQVGANDNEVINIDLKKIDREALKLEKFTLSAEV 179
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + +K ++D + V + + +
Sbjct: 180 PHGDAVTEVDDGKGAGTKSKIDYSADVKVKDLKNVNVYHAVKDDGSVDPDKYVVIGKDND 239
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ T+ A +E + +D+ + + +G+I +R+ +
Sbjct: 240 GKTKSFQATIAKDGKLTAGKDITAEASKEPLKALDSALAQVDSLRSSLGAIQNRLESTVN 299
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + + R+ DAD A+E + +S Q QQ L+ N +LSL RG
Sbjct: 300 NLNNTVNNLSSARSRIEDADYATEVSNMSRGQILQQAGTAVLAQANQVPNSVLSLLRG 357
>gi|313672751|ref|YP_004050862.1| flagellin domain protein [Calditerrivibrio nitroreducens DSM 19672]
gi|312939507|gb|ADR18699.1| flagellin domain protein [Calditerrivibrio nitroreducens DSM 19672]
Length = 778
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 49/376 (13%), Positives = 111/376 (29%), Gaps = 6/376 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +++A + + N NL +++SSGLR++ A+D+A+ +I++ ++ L
Sbjct: 5 IYNNIPSLTAQRYVGISNTNLAKSLEKLSSGLRINHASDDASGLAISEKLRGQISGLKRA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ G S + A+ M + ++ ++ D K IQ E+ QL+S++
Sbjct: 65 AMNAQDGISMLQTAEGAMGEVHSILQRMRELAVQASNGIYTTNDRKYIQDEVDQLKSEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L D + ++ + +
Sbjct: 125 RISASTEFNTKKLLNGDATALWSADSNKLDTIIRGRVAE---GNYNITVDATPGQNYIYK 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
TD ++ + + V + TI+ L +A T
Sbjct: 182 TDVMTLKDGAYAAEFVEGQNGISARKITDVNGLNRTINNTSVYTVDVVTTNLNSAAGTGF 241
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ A T+ ++ + + + AT +++
Sbjct: 242 SGVIATYAVSSATSLSNAAMDTASSTVANLTTGYYEIEALASFTGGGTAVATFGSALRVR 301
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + TL + L +
Sbjct: 302 FYNATNGTLSDWTNFDVSRSSGGTLYTNISLGGNSLRLTLGSNTVTAGDKVLFQVSNFDT 361
Query: 361 MEEMVSFIDTQIKCAT 376
+ + T +
Sbjct: 362 LNVSANASTTGAANVS 377
Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/324 (13%), Positives = 87/324 (26%), Gaps = 8/324 (2%)
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+QL+DIAR + +G N + KS D K + + +
Sbjct: 452 TQLKDIARFVNADGRNIFDNTQALTIFGNGKSTTIYLEGSDTIKDFEDKLTSAIKDGLGM 511
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+ + + + PQ + V G S F L A
Sbjct: 512 GNDDVNSVNDHLVDYVKSGTSGTPQAVAGTFVIQSALLGEDSRLSFIGDQALIDGLSLAT 571
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
+ + + K+ + T K
Sbjct: 572 IQQGKNSELNITVTNAHTGETIGSDVVNDYTLKNIIKGVDVKIDSSVDVTSSWNNTGKKI 631
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
T S + + + + + + Y + N
Sbjct: 632 TFVSKAGTESMKLHLVDNATELQIGANEGQTIE--------AYVTQLDTKSLGLNDVYMV 683
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ ++ ++ ID I+ + IG+ +R+ + + R+ + R+ D D+A
Sbjct: 684 SQELAQKSITKIDRAIEMVSGMRATIGAQVNRLEYAISNLNVTRENLVAAESRIRDLDVA 743
Query: 417 SESTRLSALQTQQQLAVQALSIVN 440
+E + Q Q L+ N
Sbjct: 744 AEMATFTRWQILNQSGTAMLAQAN 767
>gi|163801836|ref|ZP_02195733.1| flagellin [Vibrio sp. AND4]
gi|159174344|gb|EDP59148.1| flagellin [Vibrio sp. AND4]
Length = 376
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 81/221 (36%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 NVNTNVSAMTAQRYLNKAAEGQQKSMERLSSGYKINSAKDDAAGLQISNRLNAQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S +A+ M+++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVKNANDGISIAQVAEGAMNESTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + +
Sbjct: 124 NRIAETTSFGGNKLLNGTYGTQSFQIGADSGEAVMLSMGNLRSDDAEMGGKSYAAEDGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
++ L + K + I D ++T
Sbjct: 184 ASWTVSDKTELKMTYTNKQGEEQELTIQAKQGDDIEQLATY 224
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 55/199 (27%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ T + + + T G + A V
Sbjct: 177 AAEDGKDASWTVSDKTELKMTYTNKQGEEQELTIQAKQGDDIEQLATYINGQSEDVKASV 236
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
G S+ + + +G +E V+ ID
Sbjct: 237 GEDGKLQVFASSQKITGEVDFSGNLAGEIGFGDAKDVTVKDIDVTTVAGSQEAVAIIDGA 296
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+K + +G+ +R + + + V R+ D D A E+T ++ Q QQ
Sbjct: 297 LKSVDSQRASLGAFQNRFDHAISNLDNINENVNASNSRIKDTDYAKETTAMTKSQILQQA 356
Query: 432 AVQALSIVNNSTARILSLF 450
+ L+ S + L L
Sbjct: 357 STSILAQAKQSPSAALGLL 375
>gi|119434396|gb|ABL75271.1| flagellin [Vibrio alginolyticus]
Length = 376
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 40/227 (17%), Positives = 83/227 (36%), Gaps = 3/227 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 NVNTNVSAMTAQRYLNQAADGQQKSMERLSSGYKINSAKDDAAGLQISNRLNAQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S +A+ M+++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVKNANDGISIAQVAEGAMNESTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + T+
Sbjct: 124 NRIAETTSFGGNKLLNGTYGTQSFQIGADSGEAVMLSMGNLRSDTSAMGGKSYAAEEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
++ ++ K + I D ++T
Sbjct: 184 ASWTVGEKTEFKMSYTNKQGEEKELSISAKQGDDIEQLATYINGQND 230
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 56/192 (29%)
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
+ T G S + + + T G + A VG
Sbjct: 184 ASWTVGEKTEFKMSYTNKQGEEKELSISAKQGDDIEQLATYINGQNDDVKASVGEDGKLQ 243
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
S+ + +E V+ ID +K +
Sbjct: 244 VFASSQKVEGDVEFSGNLADEIGFGGPKDVTVKDIDVTTVAGSQEAVAVIDGALKSVDSQ 303
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+G+ +R + + + + V R+ D D A E+T ++ Q QQ + L+
Sbjct: 304 RASLGAFQNRFNHAISNLDNINENVNASKSRIKDTDYAKETTAMTKSQILQQASTSILAQ 363
Query: 439 VNNSTARILSLF 450
S + LSL
Sbjct: 364 AKQSGSAALSLL 375
>gi|197726037|gb|ACH73171.1| flagellin [Vibrio alginolyticus]
Length = 376
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 40/227 (17%), Positives = 83/227 (36%), Gaps = 3/227 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 NVNTNVSAMTAQRYLNQAADGQQKSMERLSSGYKINSAKDDAAGLQISNRLNAQSCGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S +A+ M+++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVKNANDGISIAQVAEGAMNESTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + T+
Sbjct: 124 NRIAETTSFGGNKLLNGTYGTQSFQIGADSGEAVMLSMGNLRSDTSAMGGKSYAAEEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
++ ++ K + I D ++T
Sbjct: 184 ASWTVGEKTEFKMSYTNKQGEEKELSISAKQGDDIEQLATYINGQND 230
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 39/362 (10%), Positives = 89/362 (24%), Gaps = 1/362 (0%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N+ G ++ + S +I + + + N ++ +
Sbjct: 15 QRYLNQAADGQQKSMERLSSGYKINSAKDDAAGLQISNRLNAQSCGLDMAVKNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S + + +
Sbjct: 75 AQVAEGAMNESTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A + A + + + + T G
Sbjct: 135 NKLLNGTYGTQSFQIGADSGEAVMLSMGNLRSDTSAMGGKSYAAEEGKD-ASWTVGEKTE 193
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
S + + + T G + A VG S+
Sbjct: 194 FKMSYTNKQGEEKELSISAKQGDDIEQLATYINGQNDDVKASVGEDGKLQVFASSQKVEG 253
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ +E V+ ID +K + +G+ +R
Sbjct: 254 DVEFSGNLADEIGFGGPKDVTVKDIDVTTVAGSQEAVAVIDGALKSVDSQRASLGAFLNR 313
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T ++ Q QQ + L+ S + LS
Sbjct: 314 FNHAISNLDNINENVNASKSRIKDTDYAKETTAMTKSQILQQASTSILAQAKQSPSAALS 373
Query: 449 LF 450
L
Sbjct: 374 LL 375
>gi|197285478|ref|YP_002151350.1| flagellin 2 [Proteus mirabilis HI4320]
gi|194682965|emb|CAR43379.1| flagellin 2 [Proteus mirabilis HI4320]
Length = 367
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 63/154 (40%), Gaps = 3/154 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN+ ++ L L +R+SSG+R++ A D+AA +IA S+ L+
Sbjct: 4 VINTNYLSLVTQNNLNRSQSALGNAIERLSSGMRINSAKDDAAGQAIANRFTSNINGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + I+ +D SIQ+E+ Q ++
Sbjct: 64 ASRNANDGISVSQTTEGALNEINNNLQRIRELTVQAKNGTNSNSDITSIQNEVNQRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
++ + FNG L + T + +
Sbjct: 124 NRVSEQTQFNGVKVLSGEKSKMTIQVGTNDNEVI 157
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 43/358 (12%), Positives = 95/358 (26%)
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
S+S + S I + S+ + ++ +
Sbjct: 10 LSLVTQNNLNRSQSALGNAIERLSSGMRINSAKDDAAGQAIANRFTSNINGLTQASRNAN 69
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ ++ + + + + I+ E D V +
Sbjct: 70 DGISVSQTTEGALNEINNNLQRIRELTVQAKNGTNSNSDITSIQNEVNQRLDEINRVSEQ 129
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ K + N + I + + T +
Sbjct: 130 TQFNGVKVLSGEKSKMTIQVGTNDNEVIEFNLDKIDNDTLGVASDNLFDAKTEKKGVKAT 189
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ +G S AT + S V S + + K
Sbjct: 190 GDAIDANALGISGGTKYATGVSVKEYKVDGKVSANKVVLKDGSDEYVVSKSDFTLKSGTT 249
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ ++ + ++ ++ +D I + K+G+I +R
Sbjct: 250 TGEIEFTGSKTIKFKADAGKDVKVLNVKDDALATLDNAISKVDESRSKLGAIQNRFQSTI 309
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + + R++DAD A+E + +S Q QQ L+ N +LSL R
Sbjct: 310 NNLNNTVNNLSASRSRILDADYATEVSNMSKNQILQQAGTAVLAQANQVPQTVLSLLR 367
>gi|297569373|ref|YP_003690717.1| flagellin domain protein [Desulfurivibrio alkaliphilus AHT2]
gi|296925288|gb|ADH86098.1| flagellin domain protein [Desulfurivibrio alkaliphilus AHT2]
Length = 933
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 86/198 (43%), Gaps = 3/198 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +AM+A ++ + NL +R+SSGLR++ AAD+A+ +IA ++S + L
Sbjct: 5 INTNIAAMNAHNNMQKTSGNLNTSLERLSSGLRINRAADDASGMAIADSLRSQSLGLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
G + V A + ++I++++TIK K + G +IQ+++ +L QL
Sbjct: 65 IRNANDGIAMVQTADGALEESINIVNTIKTKAIQAAQDGQTQESRAAIQADVNRLMEQLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IAR ++FN + L + I + +
Sbjct: 125 NIARTTAFNNQKLLSGAFTNKAFQIGAYAQETVNFSIASSESTKIGHVTSSQLNFSEAGT 184
Query: 181 TDGTERYGLLDRNHKIKV 198
+ + + +R + +
Sbjct: 185 SSLSLYSSIENRTYNLNT 202
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 48/141 (34%)
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
N D+ T + D + + + + ++ ++ D
Sbjct: 793 RNISLAADSVITAHSTLAPSGVLADVAAGEMGDTVLARLSDVDVTSQEGAQQAIAIADAA 852
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+K +GS+ +++ I + R + + D D A E+ S Q Q
Sbjct: 853 LKSLNKVRADLGSVQNQLTSTISNISVTRVNITAAESGIRDVDFAEEAANFSKFQVLNQA 912
Query: 432 AVQALSIVNNSTARILSLFRG 452
A++ N + +LSL +G
Sbjct: 913 GSFAMAQANATAQNVLSLLQG 933
>gi|86146145|ref|ZP_01064471.1| flagellin [Vibrio sp. MED222]
gi|85836092|gb|EAQ54224.1| flagellin [Vibrio sp. MED222]
Length = 392
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 84/221 (38%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 NVSTNVSAMTAQRYLNSAAEGTQKSMERLSSGYKINSAKDDAAGLQISNRLTSQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M+++ +++ +++ + +IQ E++ L ++L
Sbjct: 64 AVKNANDGISIAQTAEGAMNESTNILQRMRDLSLQSSNGSNTKSERVAIQEEVSALNTEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L GS + I + + N T
Sbjct: 124 NRIAETTSFGGNKLLNGTFGSQSFQIGADSGEAVMLTMNNMRTDTEAMGGKSYSVAEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
++ +L ++ + I + ++T
Sbjct: 184 TSWRVGEDSVLTMKYQDQFGDVQDLSITAKKGNDMEELATY 224
>gi|159045901|ref|YP_001534695.1| flagellin [Dinoroseobacter shibae DFL 12]
gi|157913661|gb|ABV95094.1| flagellin [Dinoroseobacter shibae DFL 12]
Length = 516
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 105/516 (20%), Positives = 178/516 (34%), Gaps = 65/516 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+SAM A Q L+ IN NL QD +S+G V+ A DNAA WSI+++M++D
Sbjct: 1 MSSILTNNSAMVALQTLKSINSNLSKTQDEISTGKSVATAKDNAAIWSISKVMEADVKGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
A+S+++ LG S V +A+ D+++ IK KI A E D IQ++I L+ Q+
Sbjct: 61 KAISESLSLGESTVAVARNASETVTDLLTEIKGKIVASQEENVDRAKIQTDIDALKEQIG 120
Query: 121 DI---------------------------------ARGSSFNGENWLRTDLGSSTASIAK 147
+ A SF G+N TAS
Sbjct: 121 SVISAAQFNGKNLVNSYDQSSILSSLDRDSSGTVTANSISFTGQNLTSASGTLETASALD 180
Query: 148 SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
+ ++ + ++L + + + + + I
Sbjct: 181 RIGTIDDAGTYTVGNGASLTNTANTTDLVLANDLADSATLNISFGDQQFSYTNTTGSAIA 240
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
V+ + + T I + ++ A +G
Sbjct: 241 VADLSNIVAAGLSNLGVEGVTTTSDGVDTVTIASTNKFEAIAIQGSSSGATTVDVNGAGA 300
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
++ A A + +G + + + + D +
Sbjct: 301 GVEETLVARAETVSLGGAGNTGGVVNEGDGFQIALGGQAFNYVAKDGDTLNDVATGLKRV 360
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ---------------- 371
E ++ + T T + A ++ D
Sbjct: 361 LDAGGLEGIEVKVNISDDPTIDPPTIQIDNDGATAVALTVDDGADGVASGGLVGLDGIDV 420
Query: 372 ------------IKCATAAAGKIGSISSRIHLQEDFIKL----MRDAVEKGVGRLVDADM 415
I+ + + + + + + D+++ G+G LVDADM
Sbjct: 421 TTQEGAENALANIESLIETSIDAAAQFGSVQSRIETQSDFIGKLTDSLKSGIGSLVDADM 480
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
S RL ALQ QQQL Q+LSI N + IL+LFR
Sbjct: 481 EEASARLQALQVQQQLGTQSLSIANQAPQNILALFR 516
>gi|258621094|ref|ZP_05716128.1| Flagellin D [Vibrio mimicus VM573]
gi|258626167|ref|ZP_05721015.1| Flagellin D [Vibrio mimicus VM603]
gi|262170870|ref|ZP_06038548.1| flagellin protein FlaD [Vibrio mimicus MB-451]
gi|258581522|gb|EEW06423.1| Flagellin D [Vibrio mimicus VM603]
gi|258586482|gb|EEW11197.1| Flagellin D [Vibrio mimicus VM573]
gi|261891946|gb|EEY37932.1| flagellin protein FlaD [Vibrio mimicus MB-451]
Length = 377
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 44/365 (12%), Positives = 107/365 (29%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +AM+A + L + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVAAMTAQRYLNGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVATEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ ++ + T
Sbjct: 184 KDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + + +G T + + V + + S
Sbjct: 244 QIFAGNNKVTGDVAFSGGLAGALNMQAGKAETVDTMDVTSVGGAQQSVAVIDSALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D L ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/362 (9%), Positives = 90/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N T + + S +I + + + N ++ +
Sbjct: 15 QRYLNGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + + +
Sbjct: 135 NKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVATEGKDKDWKVQAGAND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + + T G T+ A V +
Sbjct: 195 ITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEKGQLQIFAGNNKVTG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T ++ V+ ID+ +K + ++G+ +R
Sbjct: 255 DVAFSGGLAGALNMQAGKAETVDTMDVTSVGGAQQSVAVIDSALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T L+ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSILAQAKQAPNAALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|94500260|ref|ZP_01306793.1| Flagellin and related hook-associated protein [Oceanobacter sp.
RED65]
gi|94427559|gb|EAT12536.1| Flagellin and related hook-associated protein [Oceanobacter sp.
RED65]
Length = 1020
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 71/179 (39%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L + R+SSGLR++ A D+AA +I+ S L+
Sbjct: 5 INTNIASLNAQRNLDKSQSANQTALQRLSSGLRINSAKDDAAGLAISTRFNSQIRGLNVA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
G G S A+ + D + I+ D +++Q+E++QL S++
Sbjct: 65 QRNAGDGISLAQTAEGALGSMNDNLQRIRELAVQSANATNSDVDREALQAEVSQLVSEIS 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
A ++FNG L ++ A + + + + D+
Sbjct: 125 RTADETAFNGRKLLDGSFAATFQIGANAGQTLDVSIAELTADKLGASDAVGISSQGSDN 183
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 43/105 (40%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ + ++ ID I + +G+I +RI + + + +
Sbjct: 915 NGQFLTEIDISTFEGATAALTAIDNAIGAIASQRADLGAIQNRIESTVSNLAVTSENLTA 974
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R+ DAD A+E+ LS Q QQ + L+ N + ++LSL
Sbjct: 975 ANSRIADADFAAETAELSRTQVLQQAGISILAQANQAPQQVLSLL 1019
>gi|134300268|ref|YP_001113764.1| flagellin domain-containing protein [Desulfotomaculum reducens
MI-1]
gi|134052968|gb|ABO50939.1| flagellin domain protein [Desulfotomaculum reducens MI-1]
Length = 713
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 54/381 (14%), Positives = 107/381 (28%), Gaps = 5/381 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++L N +++SSGLR++ A D+AA +I++ M++ L
Sbjct: 3 INHNIAALNTYRQLSINGDNGSKALEKLSSGLRINRAGDDAAGLAISEKMRAQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D IQ EI QL S++
Sbjct: 63 SRNAQDGISMIQTAEGALNETHSILQRMRELANQAANDTNVNVDRDEIQKEINQLTSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN + L G + A + ++ ++ +
Sbjct: 123 RIGNTTEFNTQKLLNG--GRQITANATKSGVALTGGSAAAATNASVTGGVNGTDAVAAVW 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G G + + V + V ST + A
Sbjct: 181 DSGAINVGAGVADTETFTFGGVTVTLKVGAVTTGNLSSTAGNAVTLDINTADIADATKLR 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A + + G+ + A + +T +
Sbjct: 241 DGLVAAFNAAAAVGGSPIADISFSAEGTGLKATGTLAQGATNNAFEFAETSTNASFGNVG 300
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
S V T T + I + + + E A
Sbjct: 301 ATAQQSNGVGVAGVTGVAATGVITFTNVAQEGSFITLADKKIAFWDSGNTTYANSVEAKA 360
Query: 361 MEEMVSFIDTQIKCATAAAGK 381
+ +D
Sbjct: 361 ALQADFVVDVASAANATDMAT 381
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 24/198 (12%), Positives = 53/198 (26%)
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
++ N ++ + + +D + +
Sbjct: 516 SSDGTVNLVVTSASTGFAGNTIKLDVSKDATADFKATMQIGANTAQSFSIDIKDMRAKAL 575
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+E + + + + VS I+ I+
Sbjct: 576 KVSGDTSEGAVTAKNGSVANYVKLENVSNGTDNKNVEFALDVSTHTKATAAVSVINDAIE 635
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+A K+G+ +R+ + + + + R+ D DMA E + Q A
Sbjct: 636 AVSAERSKLGAFQNRLEHTINNLGTSSENLTAAESRIRDVDMAKEMMEFTKNNILSQAAQ 695
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +L L R
Sbjct: 696 AMLAQANQQPQGVLQLLR 713
>gi|218708814|ref|YP_002416435.1| flagellin [Vibrio splendidus LGP32]
gi|218321833|emb|CAV17805.1| Flagellin C [Vibrio splendidus LGP32]
Length = 392
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 84/221 (38%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 NVSTNVSAMTAQRYLNSAAEGTQKSMERLSSGYKINSAKDDAAGLQISNRLTSQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M+++ +++ +++ + +IQ E++ L ++L
Sbjct: 64 AVKNANDGISIAQTAEGAMNESTNILQRMRDLSLQSSNGSNTKSERVAIQEEVSALNTEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L GS + I + + N T
Sbjct: 124 NRIAETTSFGGNKLLNGTFGSQSFQIGADSGEAVMLTMNNMRTDTEAMGGKSYSVAEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
++ +L ++ + I + ++T
Sbjct: 184 TSWRVGEDSVLTMKYQDQFGDVQDLSITAKKGNDMEELATY 224
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 44/379 (11%), Positives = 96/379 (25%), Gaps = 4/379 (1%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGV--ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
A+ ++ A + ++++G D + +L SQ R + +
Sbjct: 13 TAQRYLNSAAEGTQKSMERLSSGYKINSAKDDAAGLQISNRLTSQSRGLDMAVKNANDGI 72
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
+ + +++ + + + R
Sbjct: 73 SIAQTAEGAMNESTNILQRMRDLSLQSSNGSNTKSERVAIQEEVSALNTELNRIAETTSF 132
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
K+ + SG T + + + + K +
Sbjct: 133 GGNKLLNGTFGSQSFQIGADSGEAVMLTMNNMRTDTEAMGGKSYSVAEGKDTSWRVGEDS 192
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS--DPGYTNSTVAKV 311
G S + + + S+ S+
Sbjct: 193 VLTMKYQDQFGDVQDLSITAKKGNDMEELATYLNGQSPDIQASVGEGGKLQLFASSQKVD 252
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
GN + + + S + N VS ID
Sbjct: 253 GNVEFGGSLAEELGLGSGKDAEGKEIPGSSKAIVTDVTVNDIDVTSVAGSNNAVSIIDGA 312
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+K + +G+ +R ++ + + V R+ D D A E+T ++ Q QQ
Sbjct: 313 LKAVDSNRASLGAFQNRFDHAISNLENINENVNASKSRIKDTDYAKETTAMTKSQILQQA 372
Query: 432 AVQALSIVNNSTARILSLF 450
+ L+ S + LSL
Sbjct: 373 STSILAQAKQSPSAALSLL 391
>gi|288940416|ref|YP_003442656.1| flagellar hook-associated protein 3 [Allochromatium vinosum DSM
180]
gi|288895788|gb|ADC61624.1| flagellar hook-associated protein 3 [Allochromatium vinosum DSM
180]
Length = 425
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 57/450 (12%), Positives = 109/450 (24%), Gaps = 33/450 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ S ++ ++++G R+ AD+ + + K+ A
Sbjct: 3 ISTSQIFQSGLSAMQGAQSKFNKTGLQLATGQRILTPADDPGGATQSVQFKAAIKATEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
K++ +A + +V+ + + AG + K I SEI QL+ +
Sbjct: 63 QRNADYAQPKLEYEEAQLIALGNVLQRARELVVAGNNDTYNPENRKIIASEIRQLREDIL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A NGE + +G I +D + D+
Sbjct: 123 GLANSEDANGEYLFAGTRSQHQPFVVGDDGRISYVGADGPGSIREVDITSNRRVATGDTG 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
V V+ + ++ + L + +
Sbjct: 183 AHVFMDIPERSGLLTEAVLKPGNSLNGVAGVELKTEVADLQRSLNSAGQTFRIRFEDDGG 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
P + I I
Sbjct: 243 TLMYKVLDPDGNAVKD-------------------------QNGALIGGPYVANQPIEFA 277
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
TV D + + T + A
Sbjct: 278 GRRVTLTVPTTTPPTVPADGDEILSRPITQVDIFKTLDDIATAFETPATDETTRESLSQA 337
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+S +D+ + +G + Q + + + D D A +
Sbjct: 338 TSMALSNLDSGLDRVNEVRTSVGLRLDALDTQAGLNDERLVDLNSTLSDIQDLDYAEAIS 397
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
R +T Q A Q + V LSLF
Sbjct: 398 RFMLQRTVLQAAQQTYTQV-----SRLSLF 422
>gi|118443608|ref|YP_877954.1| flagellin protein FliA(A) [Clostridium novyi NT]
gi|118134064|gb|ABK61108.1| flagellin protein FliA(A) [Clostridium novyi NT]
Length = 270
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 67/163 (41%), Gaps = 3/163 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRMMGQNITGAGKAMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D ++Q EI QL+ ++
Sbjct: 63 SRNAQDGISLIQTAEGALNETHAILQRMRELAVQTSNDTNTTADRTNVQKEIAQLKEEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
I+ + FN + L T + + +
Sbjct: 123 RISTDTEFNTKKLLNGSAKGVTFQVGANEKQIITLNIASMGTE 165
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 49/172 (28%), Gaps = 2/172 (1%)
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
+ R + I + S + + E
Sbjct: 99 NDTNTTADRTNVQKEIAQLKEEITRISTDTEFNTKKLLNGSAKGVTFQVGANEKQIITLN 158
Query: 342 VTLNITRHANTDAYN--EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
+ T + A + ++ I+ I + +G+I +R+ +
Sbjct: 159 IASMGTEDLGLKEVSLGTGAASQAAITKINDAINTVSGERATLGAIQNRLEHTINSDNNA 218
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA E S QQ A L+ N +L L R
Sbjct: 219 AENLQAAESRVRDVDMAKEMMEFSKKNILQQAAQAMLAQANQQPQGVLQLLR 270
>gi|254506908|ref|ZP_05119047.1| flagellin FlaB [Vibrio parahaemolyticus 16]
gi|219550193|gb|EED27179.1| flagellin FlaB [Vibrio parahaemolyticus 16]
Length = 376
Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 81/221 (36%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L ++ +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 NVNTNVSAMTAQRHLNGAAEGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
G S A+ M+++ +++ +++ +IQ E+T L +L
Sbjct: 64 AVKNANDGISIAQTAEGAMNESTNILQRMRDLALQSSNGSNSRSERIAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L GS + I S + T
Sbjct: 124 NRIAETTSFGGNKLLNGTYGSQSFQIGASSGEAVQLSMGNMRSDTADMGGKAYVAEEGKG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ L + + I+ V D ++T
Sbjct: 184 ADWRVSDNTDLTLGYTDVHGEEKELTINAKVGDDIEQVATY 224
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 42/118 (35%)
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
G + + VS ID +K + +G+ +R
Sbjct: 258 TGGLGGEIGFGDAQNKTVADVDVTTVAGSQMAVSIIDGALKNVDSQRAGLGAFQNRFGHA 317
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + + V R++D D A E+T ++ Q QQ + L+ S + LSL
Sbjct: 318 INNLDNINENVNASRSRILDTDFAKETTAMTKSQILQQASTSILAQAKQSPSSALSLL 375
>gi|28899032|ref|NP_798637.1| flagellin [Vibrio parahaemolyticus RIMD 2210633]
gi|153837011|ref|ZP_01989678.1| polar flagellin A [Vibrio parahaemolyticus AQ3810]
gi|260365222|ref|ZP_05777779.1| polar flagellin A [Vibrio parahaemolyticus K5030]
gi|260878772|ref|ZP_05891127.1| polar flagellin A [Vibrio parahaemolyticus AN-5034]
gi|260897367|ref|ZP_05905863.1| polar flagellin A [Vibrio parahaemolyticus Peru-466]
gi|260899926|ref|ZP_05908321.1| polar flagellin A [Vibrio parahaemolyticus AQ4037]
gi|15638981|sp|Q56703|FLAA_VIBPA RecName: Full=Polar flagellin A
gi|551513|gb|AAC27801.1| polar flagellin [Vibrio parahaemolyticus]
gi|28807251|dbj|BAC60521.1| polar flagellin FlaA [Vibrio parahaemolyticus RIMD 2210633]
gi|149749784|gb|EDM60529.1| polar flagellin A [Vibrio parahaemolyticus AQ3810]
gi|308088239|gb|EFO37934.1| polar flagellin A [Vibrio parahaemolyticus Peru-466]
gi|308094282|gb|EFO43977.1| polar flagellin A [Vibrio parahaemolyticus AN-5034]
gi|308107385|gb|EFO44925.1| polar flagellin A [Vibrio parahaemolyticus AQ4037]
gi|308115477|gb|EFO53017.1| polar flagellin A [Vibrio parahaemolyticus K5030]
gi|328474431|gb|EGF45236.1| flagellin [Vibrio parahaemolyticus 10329]
Length = 376
Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 84/221 (38%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 NVNTNVSAMTAQRYLNHAAEGQQKSMERLSSGYKINSAKDDAAGLQISNRLNAQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S +A+ M+++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVKNANDGISIAQVAEGAMNESTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + T+
Sbjct: 124 NRIAETTSFGGNKLLNGTYGTQSFQIGADSGEAVMLSMGSLRSDTSAMGGKSYSAEEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
++ L ++ K + I D ++T
Sbjct: 184 ASWTVGDKTELKMSYTNKQGEEKELTIKAKQGDDIEQLATY 224
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 58/192 (30%)
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
+ T G S + + T G + A VG
Sbjct: 184 ASWTVGDKTELKMSYTNKQGEEKELTIKAKQGDDIEQLATYINGQSEDVKASVGEDGKLQ 243
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
ST + + +G +E V+ ID +K +
Sbjct: 244 VFASTQKVNGEVEFSGNLAGEIGFGDAKDVTVKDIDVTTVAGSQEAVAVIDGALKSVDSQ 303
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+G+ +R + + + + V R+ D D A E+T ++ Q QQ + L+
Sbjct: 304 RASLGAFQNRFNHAISNLDNINENVNASNSRIKDTDYAKETTAMTKSQILQQASTSILAQ 363
Query: 439 VNNSTARILSLF 450
S + LSL
Sbjct: 364 AKQSPSAALSLL 375
>gi|261252313|ref|ZP_05944886.1| flagellin B [Vibrio orientalis CIP 102891]
gi|260935704|gb|EEX91693.1| flagellin B [Vibrio orientalis CIP 102891]
Length = 377
Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 3/183 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L ++ +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 NVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLNSQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
G S A+ M++ +++ +++ +IQ E+T L +L
Sbjct: 64 AVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSRGERIAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G + I S + T
Sbjct: 124 NRIAETTSFGGNKLLNGTFGDKSFQIGASSGEAVQLGIGNMRSDTIDMGGKAYVATAGKD 183
Query: 180 STD 182
+
Sbjct: 184 ADW 186
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 52/385 (13%), Positives = 103/385 (26%), Gaps = 12/385 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++ A D M ++++G + + +
Sbjct: 4 NVNTNVSAM-TAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQIS-----NRLNSQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + + + +
Sbjct: 58 SRGLDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSRGERIAIQEEVT 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ + D S I + +++ +
Sbjct: 118 ALNDELNRIAETTSFGGNKLLNGTFGDKSFQIGASSGEAVQLGIGNMRSDTIDMGGKAYV 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
AT AA T + A + T D+ AT N + D +
Sbjct: 178 ATAGKDADWGVAAGATDLTLGYTDVHGEAKNITINAKVGDDVEQLATYINGQSEDVKASV 237
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
K+ + + R + V
Sbjct: 238 GEEGKLQLFAASNKVATDVTIGGGLGGEIGFGAAE------DRTVADVDVTTVAGSQLAV 291
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
S ID +K + ++G+ +R + + + V R+VD D A E+T ++
Sbjct: 292 SVIDGALKTVDSQRAELGAFQNRFGHAISNLDNINENVNASRSRIVDTDYAKETTAMTKS 351
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q QQ + L+ S + LSL
Sbjct: 352 QILQQASTSILAQAKQSPSAALSLL 376
>gi|219670197|ref|YP_002460632.1| flagellin domain protein [Desulfitobacterium hafniense DCB-2]
gi|219540457|gb|ACL22196.1| flagellin domain protein [Desulfitobacterium hafniense DCB-2]
Length = 385
Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 70/211 (33%), Gaps = 3/211 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++ ++L N N +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNMSAINTYRQLTTNNSNNAKSLEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ TD IQ EI QL ++
Sbjct: 63 QRNAQDSISLIQTAEGALNETHSILQRMRELAVQASNDTNSTTDRDEIQKEIDQLTDEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + L + N T ++ ++
Sbjct: 123 RIANTTEFNTQKLLDGSKKGLVKAENAKAEIELNTKANITGVSVTTSAGTSATIIITRTN 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
T L
Sbjct: 183 DSSTGFAAGDFSIGDPSSTSASLTSGTTISM 213
>gi|327484671|gb|AEA79078.1| Flagellin protein FlaD [Vibrio cholerae LMA3894-4]
Length = 377
Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats.
Identities = 45/365 (12%), Positives = 109/365 (29%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +AM+A + L + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ EIT L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ ++ + T +
Sbjct: 184 KDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTEDVKASVGEDGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + + +G+ T + + V + + S
Sbjct: 244 QLFAGNNKVTGDVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDSALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D L ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 106 bits (263), Expect = 9e-21, Method: Composition-based stats.
Identities = 35/362 (9%), Positives = 89/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
T + + S +I + + + N ++ +
Sbjct: 15 QRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + + +
Sbjct: 135 NKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAEGKDKDWKVQAGAND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + + T G T A VG +
Sbjct: 195 ITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTEDVKASVGEDGKLQLFAGNNKVTG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T ++ V+ ID+ +K + ++G+ +R
Sbjct: 255 DVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDSALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T L+ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPNAALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|332188355|ref|ZP_08390080.1| flagellin protein FlaA [Sphingomonas sp. S17]
gi|332011584|gb|EGI53664.1| flagellin protein FlaA [Sphingomonas sp. S17]
Length = 372
Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats.
Identities = 52/290 (17%), Positives = 90/290 (31%), Gaps = 3/290 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN +A+ A + N +L R+SSG R++ A D+AA +I+ M + +
Sbjct: 1 MTVINTNGAALRAMAATQRANTDLAQSMARLSSGQRINSAKDDAAGLAISSSMTAQIRGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
S G S + A +S+ +++ ++ TD ++Q E+T L +
Sbjct: 61 SQGIRNAMDGVSLIQTADGVLSEVSNMLQRVRELAVQAGSGTYSMTDRAALQKEVTALAT 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ R +SFNG + A + G TI +DP +
Sbjct: 121 QIDQTIRSASFNGVALFNANAPIYDADNNLVDASVKLNVQAGPNIADTIPVSIDPVPIEF 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ V+ D +A + +
Sbjct: 181 VRDDVDGYWGWSYHGRLTNPKYRDQSQSHLVTFDDYMARGKIAGTTVARQDIGRIVYQSD 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
P A + + + T MG D
Sbjct: 241 GDQWYDPNGPTYDPGDTYDAYTARRQFSLVDELNVMNRYRTDHTMGRVDA 290
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/356 (11%), Positives = 89/356 (25%), Gaps = 1/356 (0%)
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
T + Q + +D A G + + + S A +
Sbjct: 16 ATQRANTDLAQSMARLSSGQRINSAKDDAAGLAISSSMTAQIRGMSQGIRNAMDGVSLIQ 75
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
D +++ + + V S T L + S +
Sbjct: 76 TADGVLSEVSNMLQRVRELAVQAGSGTYSMTDRAALQKEVTALATQIDQTIRSASFNGVA 135
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ A + TIPV + P S
Sbjct: 136 LFNANAPIYDADNNLVDASVKLNVQAGPNIADTIPVSIDPVPIEFVRDDVDGYWGW-SYH 194
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
T + + T + + + + Y D
Sbjct: 195 GRLTNPKYRDQSQSHLVTFDDYMARGKIAGTTVARQDIGRIVYQSDGDQWYDPNGPTYDP 254
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
D+ + + + + + +D + + G++G+ +R+
Sbjct: 255 GDTYDAYTARRQFSLVDELNVMNRYRTDHTMGRVDALLSTVASVQGQLGATGNRLESAIA 314
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + R+ D D + ES +L+ Q Q + L+ N S +L L
Sbjct: 315 TLTSGTTNLSEARSRIADTDYSDESVKLARAQILAQASTAMLAQANQSQKDVLKLL 370
>gi|284041547|ref|YP_003391887.1| flagellin domain protein [Conexibacter woesei DSM 14684]
gi|283945768|gb|ADB48512.1| flagellin domain protein [Conexibacter woesei DSM 14684]
Length = 265
Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 3/151 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A +A + L + L +R+SSG R++ AAD+AA +I++ ++ G L+
Sbjct: 5 INTNVEAFNAHRNLEGTSSKLAKSMERLSSGFRINRAADDAAGLAISEKLRGQIGGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ G S V A+ +++ ++ ++ TD +I SE+TQL ++R
Sbjct: 65 RRNVQDGISLVQTAEGSLTEVHSMLQRVRELAVQHATGTLAGTDRAAIVSEVTQLTDEIR 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
I+ + FN + LR D A
Sbjct: 125 RISNTAQFNKIDLLRADATIDFQVGANDRET 155
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 38/98 (38%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ ++ ID I + G++ +R+ + + + ++ + R+ D
Sbjct: 168 PATLDITARTALADIDRAIGAVSDQRAVFGAVQNRLEHTYNNLSVYQENLTASESRIRDV 227
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DMA+E + QQ L+ + +LSL R
Sbjct: 228 DMAAEMVNFTKNNILQQAGTSMLAQAQQAPQSVLSLLR 265
>gi|260772313|ref|ZP_05881229.1| flagellin protein FlaF [Vibrio metschnikovii CIP 69.14]
gi|260611452|gb|EEX36655.1| flagellin protein FlaF [Vibrio metschnikovii CIP 69.14]
Length = 380
Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 86/222 (38%), Gaps = 3/222 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN S + A + L + L+ +R+SSG R++ A D+ A I+ +++ L
Sbjct: 3 LSVNTNVSVLVAQRHLNQASVALQQSLERLSSGKRINRAKDDVAGLQISNRLETQMRGLG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQ 118
+ G S + A+ GM + ++ +++ + +++Q E++ L +
Sbjct: 63 VAARNANDGISIMQTAEGGMQETTTLLQRMRDLSLQSANGSNSQAERQALQEEMSALNDE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA +SF G L GS++ I + + + ++ D
Sbjct: 123 INRIAETTSFAGRKLLNGRFGSASFQIGAASGEAVQVGLKSMRSDQLLMGGFKYVSLPKD 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ L + + DI V D +++T
Sbjct: 183 PDWQVEQGNHQLSISFMNRAGITETVDIQAKVGDNIESLATY 224
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 43/101 (42%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
N + V+ IDT ++ + K+G++ +R + + + M + + R
Sbjct: 278 VNDLDITSVGGAQSAVAVIDTALQYVDSHRAKLGALQNRFYHAINNLDNMHEHLAASNSR 337
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ D D A E+T++ Q QQ++ LS LSL
Sbjct: 338 IKDTDFAKETTQMVKQQILQQVSTSILSQAKKQPHLALSLL 378
>gi|153213621|ref|ZP_01948894.1| flagellin FlaC [Vibrio cholerae 1587]
gi|183179574|ref|ZP_02957785.1| flagellin FlaC [Vibrio cholerae MZO-3]
gi|229522137|ref|ZP_04411554.1| flagellin protein FlaD [Vibrio cholerae TM 11079-80]
gi|229524183|ref|ZP_04413588.1| flagellin protein FlaD [Vibrio cholerae bv. albensis VL426]
gi|297580834|ref|ZP_06942759.1| flagellin FlaC [Vibrio cholerae RC385]
gi|124115820|gb|EAY34640.1| flagellin FlaC [Vibrio cholerae 1587]
gi|183012985|gb|EDT88285.1| flagellin FlaC [Vibrio cholerae MZO-3]
gi|229337764|gb|EEO02781.1| flagellin protein FlaD [Vibrio cholerae bv. albensis VL426]
gi|229341062|gb|EEO06067.1| flagellin protein FlaD [Vibrio cholerae TM 11079-80]
gi|297534660|gb|EFH73496.1| flagellin FlaC [Vibrio cholerae RC385]
Length = 377
Score = 131 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 43/327 (13%), Positives = 91/327 (27%), Gaps = 3/327 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ EIT L +L
Sbjct: 64 AVRNANDGISMAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAANGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G E + + T
Sbjct: 184 KNWGVEAGKTDLTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMIKASVDEEGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
I A + T + + + + S
Sbjct: 244 QLFTDNNRIDGAATFGGALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + +D + ++
Sbjct: 304 HRAELGAFQNRFNHAINNLDNINENVN 330
Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats.
Identities = 33/362 (9%), Positives = 86/362 (23%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
T + + S +I + + + N ++ +
Sbjct: 15 QRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISM 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + +
Sbjct: 135 NKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAANGKDKNWGVEAGKTD 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + + T G T+ A V
Sbjct: 195 LTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMIKASVDEEGKLQLFTDNNRIDG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T +E V+ +D +K + ++G+ +R
Sbjct: 255 AATFGGALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + + V R+ D D A E+T L+ Q Q + L+ + L+
Sbjct: 315 FNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLAQAKQAPNSALA 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|84388101|ref|ZP_00990997.1| polar flagellin D [Vibrio splendidus 12B01]
gi|84377168|gb|EAP94038.1| polar flagellin D [Vibrio splendidus 12B01]
Length = 377
Score = 131 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 47/365 (12%), Positives = 111/365 (30%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R++SG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLASGSKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSSNGSNSKSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + +T
Sbjct: 124 NRIAETTSFGGNKLLNGTHGTKSFQIGADNGEAVMLQLKDMRSDNAQMGGKSYQTENAKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + Q + + S +
Sbjct: 184 KDWNVQAGANDLKMSFTDNFGQAQEIDVSAKAGDDIEELATYINGQQDSVKASVTEDGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + + G T + + V + S
Sbjct: 244 QMFTGNNKVEGEVAFSGSLAGELGMQPGKDVTVDTIDVTSVGGAQESVAVIDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D + ++ + + +
Sbjct: 304 HRAELGAFQNRFDHAISNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/362 (9%), Positives = 90/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + + S+I + + + N ++ +
Sbjct: 15 QRYLNNANSAQQTSMERLASGSKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSSNGSNSKSERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + A +
Sbjct: 135 NKLLNGTHGTKSFQIGADNGEAVMLQLKDMRSDNAQMGGKSYQTENAKDKDWNVQAGAND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
S + + + + T G +S A V
Sbjct: 195 LKMSFTDNFGQAQEIDVSAKAGDDIEELATYINGQQDSVKASVTEDGKLQMFTGNNKVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ +G + +T +E V+ ID +K + ++G+ +R
Sbjct: 255 EVAFSGSLAGELGMQPGKDVTVDTIDVTSVGGAQESVAVIDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + V R+ D D A E+T+++ Q Q + L+ + LS
Sbjct: 315 FDHAISNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILAQAKQAPNSALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|237751661|ref|ZP_04582141.1| flagellin a [Helicobacter bilis ATCC 43879]
gi|229373027|gb|EEO23418.1| flagellin a [Helicobacter bilis ATCC 43879]
Length = 516
Score = 131 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 67/511 (13%), Positives = 142/511 (27%), Gaps = 64/511 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +A++A + L+ +++SSGLR++ AAD+A+ IA ++ AL
Sbjct: 5 VNTNINALNAHVQNVVTQRGLKDSLEKLSSGLRINKAADDASGMIIADSLRGQASALGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ IA M + + ++ T+K K T + ++IQS+I +L L
Sbjct: 65 IANTNDAMGIIQIADKAMDEQLKILDTVKVKATQAAQDGQTTESRRAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I +SFNG+ L + + S + ++ S
Sbjct: 125 MIGNTTSFNGQKLLSGSFTNKEFQVGAYSNESIKASIGATTSDKIGQVRIMTGGLITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T T + N ++ + + + I+ K + A + + +
Sbjct: 185 TVSTVFKNVDGVNDVKLQSVKISTSVGTGIGVLAEVINKSSDKTGIRAVANVISTSDEAV 244
Query: 241 QAKGIATIPVPL-------------------------PAAPAAPNTTSGTSGSKSPSVAA 275
++ ++ + + T SV
Sbjct: 245 KSGTMSNVIINGITLGDINDIKAGDSDGRLVQAFNASTNQTGVEAFTDERGRLTLRSVDG 304
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
+ +G ++ K + + +
Sbjct: 305 RGIKLSIGKNEKGQNGKVPEVAVKSMNGGQKLEGKGSENYGRLSLSRLDSRDIIVMSGTD 364
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-----ATAAAGKIGSISSRI- 389
+ N + M + + + ++G+ + +
Sbjct: 365 AKNTYKALGFDNKDVAKTVVNLRDTMGAFNKDVKSAAGANFNKVVASGGAELGAGVTTLR 424
Query: 390 ---------HLQEDFIKLMRDAVEKGVGR---------------------LVDADMASES 419
+ +R + G+ + + D A ES
Sbjct: 425 GAMVVMDIAESATKILDRIRADLGSVQGQMISTVNNISVTQVNVKAAESNIREVDFAQES 484
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ L Q A+S N IL L
Sbjct: 485 ANFNKLNILAQSGSYAMSQANAVQQNILRLL 515
>gi|262404489|ref|ZP_06081044.1| flagellin protein FlaD [Vibrio sp. RC586]
gi|262349521|gb|EEY98659.1| flagellin protein FlaD [Vibrio sp. RC586]
Length = 377
Score = 131 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 45/365 (12%), Positives = 107/365 (29%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ EIT L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A +SF G L + + I + + +
Sbjct: 124 NRVAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVATEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ ++ + T
Sbjct: 184 KDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + + +G T + + V + + S
Sbjct: 244 QIFAGNNKVTGDVAFSGGLAGALNMQAGKAETVDTMDVTSVGGAQQSVAVIDSALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D L ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/362 (9%), Positives = 90/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N T + + S +I + + + N ++ +
Sbjct: 15 QRYLNGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELNRVAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + + +
Sbjct: 135 NKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVATEGKDKDWKVQAGAND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + + T G T+ A V +
Sbjct: 195 ITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEKGQLQIFAGNNKVTG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T ++ V+ ID+ +K + ++G+ +R
Sbjct: 255 DVAFSGGLAGALNMQAGKAETVDTMDVTSVGGAQQSVAVIDSALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T L+ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSILAQAKQAPNAALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|147678437|ref|YP_001212652.1| flagellin [Pelotomaculum thermopropionicum SI]
gi|146274534|dbj|BAF60283.1| flagellin [Pelotomaculum thermopropionicum SI]
Length = 486
Score = 131 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 62/483 (12%), Positives = 123/483 (25%), Gaps = 68/483 (14%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++L + N +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTYRQLSNNNAISSKSLEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ D IQ E+ QL ++
Sbjct: 63 QRNAQDAISMIQTAEGALNETHSILQRMRELAVQAANDTNTAVDRAEIQKEVDQLAIEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + L + S+ A IG+ L L+ +S
Sbjct: 123 RIANNTEFNTQTLLNGGIKSTGLGEATFHIGANASQTLVININAMDAKSLGVSRDLVTAS 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS--------------TKKFKLAT 226
+ + I S + T AT
Sbjct: 183 ATTQGDIDTASFGDTLGAKVVDGATITFQYSAGSAATAASLTGAAAAPTTDLTGISVDAT 242
Query: 227 TSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD 286
+ AT T+ + + T
Sbjct: 243 LTVNIDGTNYTLNQTTLQSATGAGKTITDLQNALQTAIGAAGTVSNDGTKLTIQSATTGS 302
Query: 287 IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI 346
T T+ T + S + + T
Sbjct: 303 TSSVKITIAGTTTAGIDTAFGFTSGASATGTDAVGKNITVSDGTTSQVVTITDETATSFT 362
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCA------------------------------- 375
N + + +S +D+
Sbjct: 363 VSSGNYQGITITMDTGKALSDLDSVNDKIVVSVTTDAASAATFSGNEKIADAVTKAGINV 422
Query: 376 --------------------TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+A K+G+ +R+ + + + + R+ D D
Sbjct: 423 STQSAANAAITVIQNAIETVSAERSKLGAYQNRLEHTINNLGTSAENLSAAESRIRDVDY 482
Query: 416 ASE 418
A
Sbjct: 483 AEA 485
>gi|19910967|dbj|BAB87734.1| flagellin protein FliA(A) [Clostridium novyi]
Length = 270
Score = 131 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 67/163 (41%), Gaps = 3/163 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRMMGQNITGAGKAMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D ++Q EI QL+ ++
Sbjct: 63 SRNAQDGISLIQTAEGALNETHAILQRMRELAVQTSNDTNTTADRTNVQKEIAQLKEEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
I+ + FN + L T + + +
Sbjct: 123 RISTDTEFNTKKLLNGSAKGVTFQVGANEKQIITLNIASMGTE 165
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 49/172 (28%), Gaps = 2/172 (1%)
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
+ R + I + S + + E
Sbjct: 99 NDTNTTADRTNVQKEIAQLKEEITRISTDTEFNTKKLLNGSAKGVTFQVGANEKQIITLN 158
Query: 342 VTLNITRHANTDAYN--EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
+ T + A + ++ I+ I + +G+I +R+ +
Sbjct: 159 IASMGTEDLGLKEVSLDTGAASQAAITKINDAINTVSGERATLGAIQNRLEHTINSDNNA 218
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA E S QQ A L+ N +L L R
Sbjct: 219 AENLQAAESRVRDVDMAKEMMEFSKKNILQQAAQAMLAQANQQPQGVLQLLR 270
>gi|291286389|ref|YP_003503205.1| flagellin domain protein [Denitrovibrio acetiphilus DSM 12809]
gi|290883549|gb|ADD67249.1| flagellin domain protein [Denitrovibrio acetiphilus DSM 12809]
Length = 793
Score = 131 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 83/204 (40%), Gaps = 3/204 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I TN +A+++ + L ++ +R+SSGLR++ AAD+A+ +I++ ++ L
Sbjct: 4 TIYTNVAALTSQRYLSQTGSDMSKNLERLSSGLRINSAADDASGLAISEKLRGQISGLQR 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
S G S + A+ G+S D+ ++ D + IQ E+ QL+ ++
Sbjct: 64 ASMNAQDGISLLQTAEGGLSTIQDMTQRMRELAVQAGNGVYTTNDRQEIQKEVDQLKEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FN + L D + T++ I + I + + E + +
Sbjct: 124 NRVASSTEFNTKKLLNGDSTALTSTDQSDKINTIITGEVAEGNYNLNITVDPGENYVYKT 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVL 203
+ + +
Sbjct: 184 NVMSLSEDSIAAEITTVYTTNTSN 207
Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats.
Identities = 47/330 (14%), Positives = 98/330 (29%), Gaps = 1/330 (0%)
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
++ S F E+ + T S+ G+ + ++
Sbjct: 463 LSDLSQFATEDGGSIFDNNQTQSLTVYGNGTSATIYLEGDDTISDFETKLTNALVDTLGM 522
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ + V + D + GT + KL + S + D
Sbjct: 523 GADSSTSSTTSDVNNNLVNYVSTESDYTNEAVQGTFVIQTAKLGSDSQLSFIGDQSLIDG 582
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A A S V + ++ + +T I+ D
Sbjct: 583 LNLKAIQEGTNSAVTVDVTDAHTGESIGSDEVNDYVLRDVIKGVNVEIDGSTGLDISWDD 642
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
T A +T + ++ + ++ +N + D +
Sbjct: 643 AKKEMTFAAGSSTDVKLHVVDNAMEMQIGANAGQTISTAIPQVNTSSLGLDDIVMVDQDL 702
Query: 362 EEM-VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ++ ID+ ++ ++ IG+ +R+ + R+ + R+ D D ASE T
Sbjct: 703 AQASITKIDSALESISSIRATIGAQINRLEYTITGLDTQRENLTASESRIRDLDFASEMT 762
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ Q Q LS N+ ++LSL
Sbjct: 763 EFTRNQILNQAGTSMLSQANSLPQQVLSLL 792
>gi|302391057|ref|YP_003826877.1| flagellin domain protein [Acetohalobium arabaticum DSM 5501]
gi|302203134|gb|ADL11812.1| flagellin domain protein [Acetohalobium arabaticum DSM 5501]
Length = 1486
Score = 131 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 46/229 (20%), Positives = 89/229 (38%), Gaps = 4/229 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M + N +A+ A +L+ + ++SSG R+ AAD+AA +I+Q M+++ L
Sbjct: 1 MRVLN-NANALKALNQLKKNDKKRTKSLKKLSSGKRIDTAADDAAGMAISQKMRAEINGL 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQS 117
+ I G+S + A+ M D++ +K G TD +SIQ+E+ +L+S
Sbjct: 60 QQAQENIQNGTSLLQTAEGAMDSIQDILHRMKELTIQGANDTLSETDKESIQAELEELRS 119
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ IA + FNG + +A + F D+G I+
Sbjct: 120 KAGRIANETKFNGMPLIDGTFSQKQEQVAGNSSRDFNVPDDGTTVTRQIEIGDFMVDFNF 179
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
++ R + + + + + + + T
Sbjct: 180 TKLSEEEVRIDVKHEDKLLATKTITQDPLKWEKNLGGSFYDSAQDITKT 228
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ ++ + +D + + A KIGS +R+ + R + + R+ DADM
Sbjct: 1390 ASEEKIQTSLEMMDEANQKVSTARAKIGSYQNRLEHTSQNVTNYRTNLMESESRIEDADM 1449
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A E +L+ Q Q++ L+ +NN +L L
Sbjct: 1450 AQEMMKLTKRQIISQVSQTMLAQMNNIDNGVLQLL 1484
>gi|258626168|ref|ZP_05721016.1| Flagellin B [Vibrio mimicus VM603]
gi|262170871|ref|ZP_06038549.1| flagellin B [Vibrio mimicus MB-451]
gi|258581523|gb|EEW06424.1| Flagellin B [Vibrio mimicus VM603]
gi|261891947|gb|EEY37933.1| flagellin B [Vibrio mimicus MB-451]
Length = 376
Score = 131 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L ++ +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 NVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ G ++ K+IQ E++ L +L
Sbjct: 64 AVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERKAIQEEVSALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + T +
Sbjct: 124 NRIAETTSFGGNKLLNGSFGNKSFQIGADSGEAVMLSMGNMRSDTQAMGGKSYRAQDGKT 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ L N+ K I+ D ++T
Sbjct: 184 ADWRVGAATDLTLNYTDKQGNAQAVTINAKQGDDLEELATY 224
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/385 (13%), Positives = 101/385 (26%), Gaps = 13/385 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++ A D M ++++G + + +
Sbjct: 4 NVNTNVSAM-TAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQIS-----NRLTSQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + + + + +
Sbjct: 58 SRGLDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERKAIQEEVS 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ S + S I + S +++
Sbjct: 118 ALNDELNRIAETTSFGGNKLLNGSFGNKSFQIGADSGEAVMLSMGNMRSDTQAMGGKSYR 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A A + K + A + G+ + T G T
Sbjct: 178 AQDGKTADWRVGAATDLTLNYTDKQGNAQAVTINAKQGD-------DLEELATYINGQTE 230
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
A VG S+ G + +E V
Sbjct: 231 DVKASVGEGGKLQLFASSQRVDGDVTIGGGLGGEIGFEAGRDVTVADVDVSTVAGSQEAV 290
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
S +D +K + +G+ +R + + + V R+ D D A E+T ++
Sbjct: 291 SVLDGALKAVDSQRASLGAFQNRFGHAISNLDNVNENVNASRSRIRDTDYARETTAMTKA 350
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q QQ + L+ S + LSL
Sbjct: 351 QILQQASTSVLAQAKQSPSAALSLL 375
>gi|167464311|ref|ZP_02329400.1| Flagellin [Paenibacillus larvae subsp. larvae BRL-230010]
gi|322382419|ref|ZP_08056322.1| flagellin-like protein [Paenibacillus larvae subsp. larvae B-3650]
gi|321153636|gb|EFX46015.1| flagellin-like protein [Paenibacillus larvae subsp. larvae B-3650]
Length = 279
Score = 131 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+ + + N + +++SSGLR++ AAD+AA SI++ M+S L
Sbjct: 3 INHNITAMNTHRNIGINNLSSSKSMEKLSSGLRINRAADDAAGLSISEKMRSQIRGLQQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
G S V A+ M++ D++ +K + ++ E+ QL +++
Sbjct: 63 QRNAQDGVSLVQTAEGAMNEISDMLVRMKELTIQRANGTFNEDDKANLDLEMIQLAEEIK 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
+I + FNG+ +TD +
Sbjct: 123 NIQEKTKFNGKEVFKTDNEFKIVTGDS 149
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 38/87 (43%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
VS I+ IK A +G+ +R+ + + + ++ R+ D DMASE +L+
Sbjct: 193 VSDIEDAIKQVNTARSTLGAQQNRLEHTVNNLGTTTENLQAAESRIRDTDMASEMVKLTK 252
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q + L+ N +L L R
Sbjct: 253 DNILLQASQAMLAQANQHPQGVLQLLR 279
>gi|254228431|ref|ZP_04921857.1| bacterial flagellin N-terminus domain protein [Vibrio sp. Ex25]
gi|262393579|ref|YP_003285433.1| flagellin protein flaA [Vibrio sp. Ex25]
gi|151939019|gb|EDN57851.1| bacterial flagellin N-terminus domain protein [Vibrio sp. Ex25]
gi|262337173|gb|ACY50968.1| flagellin protein flaA [Vibrio sp. Ex25]
Length = 376
Score = 131 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 40/227 (17%), Positives = 83/227 (36%), Gaps = 3/227 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 NVNTNVSAMTAQRYLNQAADGQQKSMERLSSGYKINSAKDDAAGLQISNRLNAQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S +A+ M+++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVKNANDGISIAQVAEGAMNESTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + T+
Sbjct: 124 NRIAETTSFGGNKLLNGTYGTQSFQIGADSGEAVMLSMGSLRSDTSAMGGKSYAAEEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
++ ++ K + I D ++T
Sbjct: 184 ASWTVGEKTEFKMSYTNKQGEEKELSISAKQGDDIEQLATYINGQND 230
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 56/199 (28%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ T G S + + + T G + A V
Sbjct: 177 AAEEGKDASWTVGEKTEFKMSYTNKQGEEKELSISAKQGDDIEQLATYINGQNDDVKASV 236
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
G S+ + +E V+ ID
Sbjct: 237 GEDGKLQVFASSQKVQGDVEFSGNLADEIGFGGPKDVTVKDIDVTTVAGSQEAVAVIDGA 296
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+K + +G+ +R + + + + V R+ D D A E+T ++ Q QQ
Sbjct: 297 LKSVDSQRASLGAFQNRFNHAISNLDNINENVNASNSRIKDTDYAKETTAMTKSQILQQA 356
Query: 432 AVQALSIVNNSTARILSLF 450
+ L+ S + LSL
Sbjct: 357 STSILAQAKQSPSAALSLL 375
>gi|91225881|ref|ZP_01260850.1| flagellin [Vibrio alginolyticus 12G01]
gi|269965416|ref|ZP_06179535.1| Flagellin A [Vibrio alginolyticus 40B]
gi|91189531|gb|EAS75807.1| flagellin [Vibrio alginolyticus 12G01]
gi|222820586|gb|ACM67643.1| flagellin [Vibrio alginolyticus]
gi|269829895|gb|EEZ84125.1| Flagellin A [Vibrio alginolyticus 40B]
Length = 384
Score = 131 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 81/230 (35%), Gaps = 3/230 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L L +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 TVSTNVSAMTAQRYLNKATDELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++A VM +++ + ++I E L +L
Sbjct: 64 AMRNANDGISIAQTAEGAMNEATSVMQRMRDLAIQSSNGTNSPAERQAINEESMALIDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G + I S + I T + +
Sbjct: 124 NRIAETTSFGGRRLLNGSFGEAAFQIGASSGEAMIMGLTSIRADDTRMGGVTFLSENGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
+ + + ++D + + +LAT
Sbjct: 184 KNWSVDPAKSDLKITLPGMGEDEDGNVDDLEININAKAGDDIEELATYIN 233
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 37/370 (10%), Positives = 96/370 (25%), Gaps = 7/370 (1%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQL------RDIARGSSFNGENWLRTDLGSST 142
NK T + + S +I + + S + G S
Sbjct: 15 QRYLNKATDELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISI 74
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A A+ + + + + +
Sbjct: 75 AQTAEGAMNEATSVMQRMRDLAIQSSNGTNSPAERQAINEESMALIDELNRIAETTSFGG 134
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ ++ S +A+ I + ++A + ++ + +
Sbjct: 135 RRLLNGSFGEAAFQIGASSGEAMIMGLTSIRADDTRMGGVTFLSENGKDKNWSVDPAKSD 194
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ N + + T G ++ A V +
Sbjct: 195 LKITLPGMGEDEDGNVDDLEININAKAGDDIEELATYINGQSDMINASVSEDGKLQVFVA 254
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNIT-RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ + ++ + +S +D+ +K +
Sbjct: 255 HPNVQGEISISGGLASELGLSDEPIRTSVQDIDMTTVQGSQNAISVLDSALKYVDSQRAD 314
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G+ +R+ + + +++ V+ R+ D D A E+T+++ Q QQ L+
Sbjct: 315 LGAKQNRLSHSINNLANIQENVDASNSRIKDTDFAKETTQMTKAQILQQAGTSILAQAKQ 374
Query: 442 STARILSLFR 451
+SL +
Sbjct: 375 LPNSAMSLLQ 384
>gi|323491437|ref|ZP_08096621.1| flagellin [Vibrio brasiliensis LMG 20546]
gi|323314306|gb|EGA67386.1| flagellin [Vibrio brasiliensis LMG 20546]
Length = 377
Score = 131 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 71/183 (38%), Gaps = 3/183 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L ++ +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 NVNTNVSAMTAQRYLNGATDGMQKSMERLSSGYKINSARDDAAGLQISNRLNSQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
G S A+ M++ +++ +++ +IQ E+T L +L
Sbjct: 64 AVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSRSERIAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I S + T +
Sbjct: 124 NRIAETTSFGGNKLLNGTFGNQSFQIGASSGEAVQLSMGNMRSDTIDMGGKAYIAQEGKA 183
Query: 180 STD 182
+
Sbjct: 184 ADW 186
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 51/385 (13%), Positives = 102/385 (26%), Gaps = 12/385 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++ A D M ++++G + + +
Sbjct: 4 NVNTNVSAM-TAQRYLNGATDGMQKSMERLSSGYKINSARDDAAGLQIS-----NRLNSQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + + + +
Sbjct: 58 SRGLDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSRSERIAIQEEVT 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ + + S I + S +++ I
Sbjct: 118 ALNDELNRIAETTSFGGNKLLNGTFGNQSFQIGASSGEAVQLSMGNMRSDTIDMGGKAYI 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A ++ T + A T DI AT N ++D +
Sbjct: 178 AQEGKAADWTVSSGATDLTLGYTDVHGEAQELTINAKAGDDIEQLATYINGQSADVKASV 237
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
K+ + R + V
Sbjct: 238 GEEGKLQLFAASNKVATDV------TIGGGLGSEIGFGAAQERTVADVDVTSVAGSQLAV 291
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
S ID +K + ++G+ +R + + + V R+VD D A E+T ++
Sbjct: 292 SVIDGALKTVDSQRAELGAFQNRFGHAISNLDNINENVNASRSRIVDTDYAKETTAMTKS 351
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q QQ + L+ S + LSL
Sbjct: 352 QILQQASTSVLAQAKQSPSAALSLL 376
>gi|262404531|ref|ZP_06081086.1| flagellin protein FlaD [Vibrio sp. RC586]
gi|262349563|gb|EEY98701.1| flagellin protein FlaD [Vibrio sp. RC586]
Length = 377
Score = 131 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 68/183 (37%), Gaps = 3/183 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M + +++ +++ D +IQ EIT L +L
Sbjct: 64 AVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSSNGSNSKADRIAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A +SF G L + + I + + + + +
Sbjct: 124 NRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNVLMGGKTYQAANGKD 183
Query: 180 STD 182
Sbjct: 184 KNW 186
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/362 (9%), Positives = 85/362 (23%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
T + + S +I + + + N ++ +
Sbjct: 15 QRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGVAVRNANDGISM 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S D + +
Sbjct: 75 AQTAEGAMKETTNILQRMRDLSLQSSNGSNSKADRIAIQEEITALNDELNRVAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + +
Sbjct: 135 NKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNVLMGGKTYQAANGKDKNWGVEAGKND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + + T G T+ A V
Sbjct: 195 LTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMVKASVSEEGKLQLFTDNNKVDG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T +E V+ +D +K + ++G+ +R
Sbjct: 255 AATFGGSLAGELGIGAAKDVTVDTLDVTTVGGAQESVAIVDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + + V R+ D D A E+T L+ Q Q + L+ + L+
Sbjct: 315 FNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLAQAKQAPNSALA 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|56421666|ref|YP_148984.1| flagellin protein [Geobacillus kaustophilus HTA426]
gi|56381508|dbj|BAD77416.1| flagellin protein [Geobacillus kaustophilus HTA426]
Length = 297
Score = 131 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 66/160 (41%), Gaps = 3/160 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++L +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTYRQLTIGQNAAAKNMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLEQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D K +Q EI +L ++
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELAVQAANDTNTDDDRKELQKEINELVDEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
IA + FN + L + + A S + +
Sbjct: 123 RIADQTEFNTQKLLDGNGNFTFHIGANSGQTITLNISDMN 162
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 41/105 (39%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
T + + E+ ++ ID IK +A K+G+ +R+ + + + +
Sbjct: 193 TSGSGNVGVMTQSGAEQAITIIDDAIKMVSAERSKLGAYQNRLEHTINNLGTAAENLTAA 252
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D DMA E + Q A L+ N +L L R
Sbjct: 253 ESRIRDVDMAKEMMEFTKNNILTQAAQAMLAQANQQPQGVLQLLR 297
>gi|159171920|gb|ABW96217.1| FlaB [Vibrio harveyi]
Length = 307
Score = 131 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 80/217 (36%), Gaps = 3/217 (1%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N SAM+A + L + +R+SSG +++ A D+AA I+ + + + L
Sbjct: 1 NVSAMTAQRYLNQAAEGQQKSMERLSSGYKINSAKDDAAGLQISNRLNAQSRGLDMAVKN 60
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIA 123
G S +A+ M+++ +++ +++ + +IQ E+T L +L IA
Sbjct: 61 ANDGISIAQVAEGAMNESTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDELNRIA 120
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+SF G L G+ + I + + T+ ++
Sbjct: 121 ETTSFGGNKLLNGTYGTQSFQIGADSGEAVMLSMGNLRSDTSAMGGKSYAAEDGKDASWT 180
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
L + K + + D ++T
Sbjct: 181 VSDKTELKMTYTNKQGEEQELTVQAKQGDDIEQLATY 217
>gi|27365271|ref|NP_760799.1| flagellin [Vibrio vulnificus CMCP6]
gi|37680675|ref|NP_935284.1| flagellin [Vibrio vulnificus YJ016]
gi|320155655|ref|YP_004188034.1| flagellin protein FlaA [Vibrio vulnificus MO6-24/O]
gi|27361418|gb|AAO10326.1| Flagellin protein flaA [Vibrio vulnificus CMCP6]
gi|37199424|dbj|BAC95255.1| polar flagellin FlaA [Vibrio vulnificus YJ016]
gi|319930967|gb|ADV85831.1| flagellin protein FlaA [Vibrio vulnificus MO6-24/O]
Length = 376
Score = 131 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 41/227 (18%), Positives = 82/227 (36%), Gaps = 3/227 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 NVNTNVSAMTAQRYLNQAAEGQQKSMERLSSGYKINSAKDDAAGLQISNRLNSQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
G S A+ M++ +++ +++ +IQ E++ L +L
Sbjct: 64 AVKNANDGISIAQTAEGAMTETTNILQRMRDLALQSSNGSNSRSERVAIQEEVSALNQEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L GS + I + + T L ++
Sbjct: 124 NRIAETTSFGGNKLLNGTYGSQSFQIGADSGEAVMLSMGNLRSDTDAMGGLSYKSEEGVG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ ++ K + ++ D ++T
Sbjct: 184 ADWRVSDNTDFTMSYVNKQGEEKEITVNAKAGDDLEELATYINGQND 230
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 43/103 (41%)
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
+ + +E V+ ID +K + +G+ +R + + + + V
Sbjct: 273 TNVSNIDVTTVAGSQEAVAIIDGALKSVDSERASLGAFQNRFNHAISNLSNINENVNASS 332
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R+ D D A E+T+++ Q QQ + L+ S + LSL
Sbjct: 333 SRIKDTDYAKETTQMTKTQILQQASTSILAQAKQSPSAALSLL 375
>gi|212709526|ref|ZP_03317654.1| hypothetical protein PROVALCAL_00568 [Providencia alcalifaciens DSM
30120]
gi|212687864|gb|EEB47392.1| hypothetical protein PROVALCAL_00568 [Providencia alcalifaciens DSM
30120]
Length = 384
Score = 131 bits (327), Expect = 4e-28, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 57/152 (37%), Gaps = 3/152 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++ L L +R+SSG R++ A D+AA +IA ++ L+
Sbjct: 4 VINTNILSLTTQNNLNRSQGVLGTAIERLSSGSRINSAKDDAAGQAIANRFTANVKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S A+ +++ D + ++ +SI E+T ++
Sbjct: 64 ASRNANDGISIAQTAEGAVNEINDNLQRVRELTVQAQNGTNSKSDIESINKEVTARMDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
I+ + FNG L D
Sbjct: 124 NRISEQTQFNGVKVLSEDTSMKIQVGTNDSET 155
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 42/352 (11%), Positives = 91/352 (25%), Gaps = 1/352 (0%)
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
+ + Q+ + + G S A A+ + +
Sbjct: 33 SSGSRINSAKDDAAGQAIANRFTANVKGLTQASRNANDGISIAQTAEGAVNEINDNLQRV 92
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
++T ++S + + +K + +
Sbjct: 93 RELTVQAQNGTNSKSDIESINKEVTARMDEINRISEQTQFNGVKVLSEDTSMKIQVGTND 152
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+A + + + G + AA+
Sbjct: 153 SETIAINLKKIDSEVLGLKGFDASSKGKFGTEVTSDSFVSALQGDLDDSVTATAAAKKGF 212
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
K + P T+ + E T + + +G
Sbjct: 213 EDITVGGDKITDAKIYYATKPDGTDDKTQMLVVGKDAAGKEVTGKIAAPTVTAGEKAGSV 272
Query: 341 MVTLNITRHAN-TDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
L T + L + +S +D + + +G+I +R+ + +
Sbjct: 273 APKLEFADATALTPDEQKALDAKNPLSTLDKALATVDSLRSDLGAIQNRLQSTINNLNNS 332
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R+ DAD A+E + +S Q QQ L+ N +LSL R
Sbjct: 333 VNNLSAARSRIQDADFATEVSNMSRGQILQQAGTAVLAQANQVPQGVLSLLR 384
>gi|254445980|ref|ZP_05059456.1| Bacterial flagellin C-terminus domain protein [Verrucomicrobiae
bacterium DG1235]
gi|198260288|gb|EDY84596.1| Bacterial flagellin C-terminus domain protein [Verrucomicrobiae
bacterium DG1235]
Length = 390
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 60/423 (14%), Positives = 127/423 (30%), Gaps = 37/423 (8%)
Query: 31 VSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMST 90
++SG+ + +++A +++ M + ++ S +IG S + M+ A +++S
Sbjct: 1 MTSGMSATGPSEDAGGLAVSMKMDAAIRRQASASASIGNTLSYLQTQDGAMNTASEILSR 60
Query: 91 I---KNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
I K + TD + +E QL+ QL + +FNG + ++ + S
Sbjct: 61 IGELKTLSQDVTKNTTDKANYNTEFLQLKEQLSGL-TSETFNGLSLFGSESLTVKTSGN- 118
Query: 148 SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
I L L + G+ N + +D
Sbjct: 119 ----------PDGGTIQLSGVDLLGSGPLFEDDFSGSSLSSDWTVNSGSPAVNSGVLTLD 168
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
S + ++ + + + P T
Sbjct: 169 GSRITLAEAFDEDVSVEVQVRFDNSSDQLDIYNDSNYYLSGYIDGNELPDTDWHTLTFDL 228
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
+ ++A +S +T + +
Sbjct: 229 ATDGTMANLELDGSDFSSATG----------------------TVSTASGDISFGLSESG 266
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
D + + S + + + + + + I + G+ S
Sbjct: 267 SGDGVEFRNLSVSPQSGVSSSSSVGSVASTADLDSVDIETVKDAIGEVATFRAQNGAQQS 326
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
R++ ++ + R +E R++D D+A+EST L+ L QQ L N S L
Sbjct: 327 RLNFAQEQLNTNRVNLEAAKSRIMDVDVAAESTNLARLNILQQAGASMLQQANQSQQIAL 386
Query: 448 SLF 450
L
Sbjct: 387 KLI 389
>gi|258621095|ref|ZP_05716129.1| Flagellin B [Vibrio mimicus VM573]
gi|258586483|gb|EEW11198.1| Flagellin B [Vibrio mimicus VM573]
Length = 376
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L ++ +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 NVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ G ++ K+IQ E++ L +L
Sbjct: 64 AVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERKAIQEEVSALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + T +
Sbjct: 124 NRIAETTSFGGNKLLNGSFGNKSFQIGADSGEAVMLSMGNMRSDTQAMGGKSYRAQDGKA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ L N+ K I+ D ++T
Sbjct: 184 ADWRVGAATDLTLNYTDKQGNAQAVTINAKQGDDLEELATY 224
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/385 (13%), Positives = 101/385 (26%), Gaps = 13/385 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++ A D M ++++G + + +
Sbjct: 4 NVNTNVSAM-TAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQIS-----NRLTSQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + + + + +
Sbjct: 58 SRGLDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERKAIQEEVS 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ S + S I + S +++
Sbjct: 118 ALNDELNRIAETTSFGGNKLLNGSFGNKSFQIGADSGEAVMLSMGNMRSDTQAMGGKSYR 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A A + K + A + G+ + T G T
Sbjct: 178 AQDGKAADWRVGAATDLTLNYTDKQGNAQAVTINAKQGD-------DLEELATYINGQTE 230
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
A VG S+ G + +E V
Sbjct: 231 DVKASVGEGGKLQLFASSQRVDGDVTIGGGLGGEIGFEAGRDVTVADVDVSTVAGSQEAV 290
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
S +D +K + +G+ +R + + + V R+ D D A E+T ++
Sbjct: 291 SVLDGALKAVDSQRASLGAFQNRFGHAISNLDNVNENVNASRSRIRDTDYARETTAMTKA 350
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q QQ + L+ S + LSL
Sbjct: 351 QILQQASTSVLAQAKQSPSAALSLL 375
>gi|163802595|ref|ZP_02196487.1| flagellin [Vibrio sp. AND4]
gi|159173678|gb|EDP58497.1| flagellin [Vibrio sp. AND4]
Length = 384
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 45/230 (19%), Positives = 82/230 (35%), Gaps = 3/230 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + L +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 TVSTNVSAMTAQRYLNKASNELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++A VM +++ + ++I E T L +L
Sbjct: 64 AMRNANDGISIAQTAEGAMNEATSVMQRMRDLAIQSSNGTNSPSERQAINEESTALIDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G + I S + I + +
Sbjct: 124 NRIAETTSFGGRRLLNGSFGEAAFQIGSSSGEAMIMALTSIRADDQRMGGVTFFSENGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
G + + + + D + + +LAT
Sbjct: 184 KDWGVDPTKADLKITLPGMGEDEDGNPDDLEININAKSGDDIEELATYIN 233
Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats.
Identities = 36/370 (9%), Positives = 93/370 (25%), Gaps = 7/370 (1%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQL------RDIARGSSFNGENWLRTDLGSST 142
NK + + + S +I + + S + G S
Sbjct: 15 QRYLNKASNELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISI 74
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A A+ + + + + +
Sbjct: 75 AQTAEGAMNEATSVMQRMRDLAIQSSNGTNSPSERQAINEESTALIDELNRIAETTSFGG 134
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ ++ S +A+ I + + + ++A + +
Sbjct: 135 RRLLNGSFGEAAFQIGSSSGEAMIMALTSIRADDQRMGGVTFFSENGKDKDWGVDPTKAD 194
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ N + + T G ++ A V
Sbjct: 195 LKITLPGMGEDEDGNPDDLEININAKSGDDIEELATYINGQSDMINASVSEDGKLQIFVE 254
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNIT-RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ ++ + +S +D+ +K +
Sbjct: 255 HPNVQGDISISGGLASDLGLSDEAVRTSVQDIDMTTVQGSQNAISVLDSALKYVDSQRAD 314
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G+ +R+ + + +++ V+ R+ D D A E+T+++ Q QQ L+
Sbjct: 315 LGAKQNRLSHSINNLANIQENVDASNSRIKDTDFAKETTQMTKAQILQQAGTSILAQAKQ 374
Query: 442 STARILSLFR 451
+SL +
Sbjct: 375 LPNSAMSLLQ 384
>gi|156975440|ref|YP_001446347.1| flagellin [Vibrio harveyi ATCC BAA-1116]
gi|156527034|gb|ABU72120.1| hypothetical protein VIBHAR_03171 [Vibrio harveyi ATCC BAA-1116]
Length = 376
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 83/221 (37%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 NVNTNVSAMTAQRYLNQAAEGQQKSMERLSSGYKINSAKDDAAGLQISNRLNAQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
G S +A+ M+++ +++ +++ +IQ E+T L +L
Sbjct: 64 AVKNANDGISIAQVAEGAMNESTNILQRMRDLSLQSANGSNSRSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + T+
Sbjct: 124 NRIAETTSFGGNKLLNGTYGTQSFQIGADSGEAVMLSMGNLRSDTSAMGGKSYSAEDGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
++ L + K + I+ D ++T
Sbjct: 184 ASWAVGDNTELKMTYTNKQGEEKELTINAKQGDDIEQLATY 224
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+E V+ ID +K + +G+ +R + + + + V R+ D D
Sbjct: 280 VTTVAGSQEAVAIIDGALKSVDSQRASLGAFQNRFNHAISNLDNINENVNASNSRIKDTD 339
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A E+T ++ Q QQ + L+ S + LSL
Sbjct: 340 YAKETTAMTKSQILQQASTSILAQAKQSPSAALSLL 375
>gi|229524144|ref|ZP_04413549.1| flagellin protein FlaD [Vibrio cholerae bv. albensis VL426]
gi|229337725|gb|EEO02742.1| flagellin protein FlaD [Vibrio cholerae bv. albensis VL426]
Length = 377
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 45/365 (12%), Positives = 107/365 (29%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +AM+A + L + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ EIT L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ ++ + T
Sbjct: 184 KDWKVQAGANDITFTLKDIDGNDQTITVNTKEGDDIEEVATYINGQTDMVKASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + + +G T + + V + + S
Sbjct: 244 QIFAGNNKVTGDVAFSGGLAGALNMQAGKAETVHTMDVTSVGGAQQSVAVIDSALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D L ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 106 bits (263), Expect = 9e-21, Method: Composition-based stats.
Identities = 34/362 (9%), Positives = 89/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
T + + S +I + + + N ++ +
Sbjct: 15 QRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + + +
Sbjct: 135 NKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAEGKDKDWKVQAGAND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + + T G T+ A V +
Sbjct: 195 ITFTLKDIDGNDQTITVNTKEGDDIEEVATYINGQTDMVKASVNEKGQLQIFAGNNKVTG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T ++ V+ ID+ +K + ++G+ +R
Sbjct: 255 DVAFSGGLAGALNMQAGKAETVHTMDVTSVGGAQQSVAVIDSALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T L+ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPNAALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|156973597|ref|YP_001444504.1| flagellin [Vibrio harveyi ATCC BAA-1116]
gi|156525191|gb|ABU70277.1| hypothetical protein VIBHAR_01300 [Vibrio harveyi ATCC BAA-1116]
Length = 384
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 45/230 (19%), Positives = 81/230 (35%), Gaps = 3/230 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L L +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 TVSTNVSAMTAQRYLNKATNELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++A VM +++ + K+I E + L +L
Sbjct: 64 AMRNANDGISIAQTAEGAMNEATSVMQRMRDLAIQSANGTNSPAERKAINEESSALTDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G + I S + I + +
Sbjct: 124 NRIAETTSFGGRRLLNGSFGEAAFQIGSSSGEAMIMALTSIRADDQRMGGVTFFSENGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
G + + + + D + + +LAT
Sbjct: 184 KDWGVDPTKADLKITLPGMGEDEDGNPDDLEININAKTGDDIEELATYIN 233
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 37/370 (10%), Positives = 94/370 (25%), Gaps = 7/370 (1%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQL------RDIARGSSFNGENWLRTDLGSST 142
NK T + + S +I + + S + G S
Sbjct: 15 QRYLNKATNELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISI 74
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A A+ + + + + +
Sbjct: 75 AQTAEGAMNEATSVMQRMRDLAIQSANGTNSPAERKAINEESSALTDELNRIAETTSFGG 134
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ ++ S +A+ I + + + ++A + +
Sbjct: 135 RRLLNGSFGEAAFQIGSSSGEAMIMALTSIRADDQRMGGVTFFSENGKDKDWGVDPTKAD 194
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ N + + T G ++ A V +
Sbjct: 195 LKITLPGMGEDEDGNPDDLEININAKTGDDIEELATYINGQSDMINASVSEDGKLQVFVA 254
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNIT-RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ ++ + +S +D+ +K +
Sbjct: 255 HPNVQGDISISGGLASDLGLSDEAVRTSVQDIDMTTVQGSQNAISVLDSALKYVDSQRAD 314
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G+ +R+ + + +++ V+ R+ D D A E+T+++ Q QQ L+
Sbjct: 315 LGAKQNRLSHSINNLANIQENVDASNSRIKDTDFAKETTQMTKAQILQQAGTSILAQAKQ 374
Query: 442 STARILSLFR 451
+SL +
Sbjct: 375 LPNSAMSLLQ 384
>gi|148976404|ref|ZP_01813110.1| flagellin [Vibrionales bacterium SWAT-3]
gi|145964227|gb|EDK29483.1| flagellin [Vibrionales bacterium SWAT-3]
Length = 376
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 82/221 (37%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + + +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 NVSTNVSAMTAQRYLNNAAEGTQKSMERLSSGYKINSAKDDAAGLQISNRLTSQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M+++ +++ +++ + +IQ E++ L ++L
Sbjct: 64 AVKNANDGISIAQTAEGAMNESTNILQRMRDLSLQSANGSNSKSERVAIQEEVSALNTEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L GS + I + + T
Sbjct: 124 NRIAETTSFGGNKLLNGTYGSQSFQIGADSGEAVMLSMGNMRTDTQEMGGKSYGVTEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
++ L + K I + ++T
Sbjct: 184 ASWRVGAGADLTIKYNDKFGEAQELSISAKEGNDIEELATY 224
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 40/101 (39%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
N E VS ID +K + +G+ +R ++ + + V R
Sbjct: 275 VNDIDVTSVAGANEAVSIIDGALKSVDSQRASLGAFQNRFDHAISNLENINENVNASKSR 334
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ D D A E+T ++ Q QQ + L+ S + LSL
Sbjct: 335 IKDTDYAKETTAMTKSQILQQASTSILAQAKQSPSAALSLL 375
>gi|17366564|sp|Q56572|FLAB_VIBAN RecName: Full=Flagellin B
gi|1272426|gb|AAB09435.1| flagellin B [Listonella anguillarum]
Length = 376
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 84/221 (38%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + + +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 NVSTNVSAMTAQRYLNNAADGTQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ ++ ++IQ E++ L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSSSERQAIQEEVSALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + T +
Sbjct: 124 NRIAETTSFGGNKLLNGSFGNKSFQIGADSGEAVMLSMSDMRSDTKAMGGKSYVATNGKA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
L ++ K I+ D ++T
Sbjct: 184 PDWSVTNATDLTLSYTDKQGEAREVTINAKAGDDLEEVATY 224
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 40/97 (41%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+E V+ ID +K + +G+ +R + + + V R+ D
Sbjct: 279 NVTTVGGSQEAVALIDGALKAVDSQRASLGAFQNRFGHAISNLDNINENVNASRSRIKDT 338
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D A E+T+++ Q QQ + L+ S + LSL
Sbjct: 339 DYARETTQMTKSQILQQASTSVLAQAKQSPSAALSLL 375
>gi|323496566|ref|ZP_08101620.1| flagellin [Vibrio sinaloensis DSM 21326]
gi|323318410|gb|EGA71367.1| flagellin [Vibrio sinaloensis DSM 21326]
Length = 377
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 46/365 (12%), Positives = 108/365 (29%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNSANNAQQTSMERLSSGSKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + N + +
Sbjct: 124 NRIAETTSFGGNKLLNGTYATKSFQIGADNGEAVMLTLNDMRSDNSGMGGTSYQAENAKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + T +
Sbjct: 184 KNWTVQAGSNDLSITLTAKGGEEETINISAKAGDDIEELATYINGQTDMVKASVNEDGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + G T + + + T + S
Sbjct: 244 QVFAGNNKVEGDVSFGGGLAGELGMQDGQAVTVDTIDVTSVGGAQESVAIIDTALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D ++ ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTSMTKSQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 44/362 (12%), Positives = 93/362 (25%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + S S+I + + + N ++ +
Sbjct: 15 QRYLNSANNAQQTSMERLSSGSKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + N G+ A T S
Sbjct: 135 NKLLNGTYATKSFQIGADNGEAVMLTLNDMRSDNSGMGGTSYQAENAKDKNWTVQAGSND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
S ++ A N + T G T+ A V
Sbjct: 195 LSITLTAKGGEEETINISAKAGDDIEELATYINGQTDMVKASVNEDGQLQVFAGNNKVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T +E V+ IDT +K + ++G+ +R
Sbjct: 255 DVSFGGGLAGELGMQDGQAVTVDTIDVTSVGGAQESVAIIDTALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + + V R+ D D A E+T ++ Q Q + L+ + LS
Sbjct: 315 FNHAINNLDNINENVNASKSRIKDTDFAKETTSMTKSQILSQASSSILAQAKQAPNSALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|315452873|ref|YP_004073143.1| flagellin domain-containing protein [Helicobacter felis ATCC 49179]
gi|5441621|emb|CAB46859.1| flagellin B [Helicobacter felis]
gi|315131925|emb|CBY82553.1| flagellin domain protein [Helicobacter felis ATCC 49179]
Length = 514
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 56/510 (10%), Positives = 122/510 (23%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSD------- 56
I TN +A++A N +L +++SSGLR++ AAD+A+ +IA ++S
Sbjct: 5 INTNVAALNAHTIGVRNNRDLSTSLEKLSSGLRINKAADDASGMAIADSLRSQSASLGQA 64
Query: 57 ---------------------NGALSAVSDAIGLGSSKVDIAKAG----------MSKAI 85
L V + A+ + +
Sbjct: 65 VRNANDAIGVVQTADKAMDEQIKILDTVKTKAVQAAQDGQTAETRKALQSDILRLLEELD 124
Query: 86 DVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
++ +T + +K Q + I S + +
Sbjct: 125 NIANTTSFNGQQLLAGSFSNKEFQIGAYSNTTIKASIGPTGSDKIGHVRFETSAMDRGGM 184
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
S +++ + E+V + +S + N
Sbjct: 185 EVSAGAQNLKEVTLNFKQADAVNDFKLESVKISTSAGTGLGALVNVINKNSSTLGVRATA 244
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
+ + + S T D+ + + T
Sbjct: 245 VVLGTGENSVESGTINGLTINGVLIGNVNDVQHNDRDGRLTNAINSVKERTGVEAYTDIQ 304
Query: 266 SGSKSPSVAASATYIRMGNSDI------------------------WVRATTKNSITSDP 301
S A + ++
Sbjct: 305 GRINLRSTDGRAISVHADGKTGHVFGGGNFRGISGNAHAIVGRLTLTKENARDIIVSGVN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G Y V+ ++ + +
Sbjct: 365 FSHVGLHSAQGVAEYTVNLQAIRGVFDANAASAGGGNANAAQAAFNFKGIGAGVTSLRGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ ++ +GS+ + + I + + V+ ++ D D A ES
Sbjct: 425 MMVMDMAESARIQLDKIRSDLGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESAS 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKFNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|168187535|ref|ZP_02622170.1| flagellin [Clostridium botulinum C str. Eklund]
gi|169294566|gb|EDS76699.1| flagellin [Clostridium botulinum C str. Eklund]
Length = 271
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 82/220 (37%), Gaps = 3/220 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNMNAMNAHRMMGQNINGAGKAMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D +++Q E+ QLQS+L
Sbjct: 63 SRNAQDGISLIQTAEGALNETHAILQRMRELAVQTANDTNVTADRENVQKEVKQLQSELS 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L I + + + ++ S
Sbjct: 123 RISEQTEFNTKKLLDGKASKINFQIGANKDQNITVKIDKMSASALKVASVNLSKSASKCS 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
++ + + +++ ++ S
Sbjct: 183 AAIETIDKAINTVSATRADLGAVQNRLEHTINSDNNASEN 222
Score = 85.6 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 36/95 (37%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ ID I +A +G++ +R+ + + ++ R+ D DMA
Sbjct: 177 SASKCSAAIETIDKAINTVSATRADLGAVQNRLEHTINSDNNASENLQAAESRIRDVDMA 236
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + S QQ A L+ N +L L R
Sbjct: 237 KEMMQFSKKNILQQAAQAMLAQANQQPQGVLQLLR 271
>gi|2271027|gb|AAC01556.1| flagellin [Vibrio cholerae]
Length = 377
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 45/365 (12%), Positives = 109/365 (29%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +AM+A + L + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ EIT L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ ++ + T
Sbjct: 184 KDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + + +G+ T + + V + + S
Sbjct: 244 QVFAGNNKVTGDVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDSALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D + L ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKEITALTKSQILSQASSSVLA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/362 (9%), Positives = 88/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
T + + S +I + + + N ++ +
Sbjct: 15 QRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + + +
Sbjct: 135 NKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAEGKDKDWKVQAGAND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + + T G T+ A V +
Sbjct: 195 ITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEKGQLQVFAGNNKVTG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T ++ V+ ID+ +K + ++G+ +R
Sbjct: 255 DVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDSALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E T L+ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKEITALTKSQILSQASSSVLAQAKQAPNAALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|17366557|sp|Q56570|FLAE_VIBAN RecName: Full=Probable flagellin E
gi|1272424|gb|AAB09433.1| flagellin E [Listonella anguillarum]
Length = 377
Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats.
Identities = 49/357 (13%), Positives = 100/357 (28%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SA+ A + L + L +R++SG R++ A D+AA I+ ++S L
Sbjct: 4 TVNTNVSALIAQRHLGSASEMLNQSLERLASGKRINSAKDDAAGLQISNRLESQMRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M + ++ +++ D +++Q E+ L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMQETTSLLQRMRDLSLQSANGANSKADRQALQEEMGALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G S+ I S + + +
Sbjct: 124 NRIAETTSFGGRKLLNGSFGQSSFQIGASSGEAVQVSLKNMRSDSLDMGGFSYVAAGMAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + + + T +
Sbjct: 184 SQWRVTQDNRQLTMSYTDAKGKQHNIQIQAKVGDDIEELATYINGQTDKVSASVNDKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + N T + + V T + S
Sbjct: 244 QLFMAGKETSGTIDFKGSLANQLQMNVTGYEAVDTLDITEVGGAQRAVAVIDTAMQYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D L S K+ D + + + +
Sbjct: 304 HRSELGALQNRFNHAINNLDNVHENLASSNSRIKDTDYAKETTQMVKQQILQQVSTS 360
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/376 (11%), Positives = 105/376 (27%), Gaps = 11/376 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
IA+ + A ++++ ++ + + +
Sbjct: 13 IAQRHLGSASEMLNQSLERLA-----SGKRINSAKDDAAGLQISNRLESQMRGLDVAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + ++ + +
Sbjct: 68 ANDGISIMQTAEGAMQETTSLLQRMRDLSLQSANGANSKADRQALQEEMGALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ S +S I + S +++ + +A
Sbjct: 128 ETTSFGGRKLLNGSFGQSSFQIGASSGEAVQVSLKNMRSDSLDMGGFSYVAAGMADSQWR 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
N S + + + DI AT N T + + ++
Sbjct: 188 VTQDNRQLTMSYTDAKGKQHNIQIQAKVGDDIEELATYINGQTDKVSASVNDKGQLQLFM 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+T T + + +T E + V+ IDT ++
Sbjct: 248 AGKETSGTIDFKGSLANQLQMNVTGYEA------VDTLDITEVGGAQRAVAVIDTAMQYV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ ++G++ +R + + + + + + R+ D D A E+T++ Q QQ++
Sbjct: 302 DSHRSELGALQNRFNHAINNLDNVHENLASSNSRIKDTDYAKETTQMVKQQILQQVSTSI 361
Query: 436 LSIVNNSTARILSLFR 451
L+ L+L R
Sbjct: 362 LAQAKKQPNLALALLR 377
>gi|37679155|ref|NP_933764.1| flagellin [Vibrio vulnificus YJ016]
gi|161501853|ref|NP_759225.2| flagellin [Vibrio vulnificus CMCP6]
gi|320157101|ref|YP_004189480.1| flagellin protein FlaC [Vibrio vulnificus MO6-24/O]
gi|37197897|dbj|BAC93735.1| polar flagellin FlaC [Vibrio vulnificus YJ016]
gi|319932413|gb|ADV87277.1| flagellin protein FlaC [Vibrio vulnificus MO6-24/O]
gi|319999022|gb|AAO08752.2| Flagellin protein flaC [Vibrio vulnificus CMCP6]
Length = 385
Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 72/183 (39%), Gaps = 3/183 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L L +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 TVSTNVSAMTAQRYLNKATDELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M++A V+ +++ ++ ++I E + LQ ++
Sbjct: 64 AMRNANDGISIAQTAEGAMNEATAVLQRMRDLSIQSANGTNSTSERQAIHEEASALQDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G + I + + I ++ +
Sbjct: 124 NRIAETTSFGGRRLLNGTFGDAAFQIGSNSGEAMIMGLTSIRADDFRMGGTTFQSENGKN 183
Query: 180 STD 182
Sbjct: 184 KDW 186
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/371 (9%), Positives = 91/371 (24%), Gaps = 7/371 (1%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
NK T + + S +I + + + ++ +
Sbjct: 15 QRYLNKATDELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S+++ +
Sbjct: 75 AQTAEGAMNEATAVLQRMRDLSIQSANGTNSTSERQAIHEEASALQDEINRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A + + + S +
Sbjct: 135 RRLLNGTFGDAAFQIGSNSGEAMIMGLTSIRADDFRMGGTTFQSENGKNKDWEVSADNAE 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + D+ + K+ + T + +
Sbjct: 195 LNIVLPEMGEDEDGNVIDLEINIMAKSGDDIEELATYINGQSDYINASVSEDGKLQIFVA 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYN-------EKLAMEEMVSFIDTQIKCATAAAGK 381
+ K S + + A + +S ID +K +
Sbjct: 255 QPNVKGDISISGSLASELGLSDEPIATTVQDLDLRTVQGSQNAISVIDAALKYVDSQRAD 314
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G+ +R+ + + +++ V+ R+ D D A E+T+++ Q QQ L+
Sbjct: 315 LGAKQNRLSHSINNLANVQENVDASNSRIKDTDFAKETTQMTKAQILQQAGTSILAQAKQ 374
Query: 442 STARILSLFRG 452
+SL +G
Sbjct: 375 LPNSAMSLLQG 385
>gi|312884921|ref|ZP_07744611.1| flagellin [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367398|gb|EFP94960.1| flagellin [Vibrio caribbenthicus ATCC BAA-2122]
Length = 377
Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats.
Identities = 39/258 (15%), Positives = 79/258 (30%), Gaps = 3/258 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L ++ +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 NVNTNVSAMTAQRYLNAATDGMQKSMERLSSGYKINSARDDAAGLQISNRLNSQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ MS++ ++ +++ + ++Q E++ L +L
Sbjct: 64 AVRNANDGISISQTAEGAMSESTSILQRMRDLALQSSNGSNSISERTALQEEVSALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + T +
Sbjct: 124 NRIAESTSFGGYKLLNGTYGTQSFQIGAGSGEAVQLSMGNMRSDTDEMGGKVYIASTGKA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S E V + + + +
Sbjct: 184 SDWVVEAGKEDITLAYDDVNGKSHSIDITAKVGDDLQELATFINGQSEDVKASVGEDNKL 243
Query: 240 DQAKGIATIPVPLPAAPA 257
+ +
Sbjct: 244 QLFASANKVASDVTVTGN 261
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/362 (11%), Positives = 93/362 (25%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N T G+++ + S +I + + + N ++ +
Sbjct: 15 QRYLNAATDGMQKSMERLSSGYKINSARDDAAGLQISNRLNSQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ T + +
Sbjct: 75 SQTAEGAMSESTSILQRMRDLALQSSNGSNSISERTALQEEVSALNDELNRIAESTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ A + A + + A+
Sbjct: 135 YKLLNGTYGTQSFQIGAGSGEAVQLSMGNMRSDTDEMGGKVYIASTGKASDWVVEAGKED 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + + V + T G + A VG + S +
Sbjct: 195 ITLAYDDVNGKSHSIDITAKVGDDLQELATFINGQSEDVKASVGEDNKLQLFASANKVAS 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ + + +S ID +K + ++G+ +R
Sbjct: 255 DVTVTGNLGTDIGFAAGQKSTVSDIDISTVAGSQLAISVIDGALKTVDSQRAQLGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
++ + + V R+VD D A E+T+++ Q QQ L+ S + LS
Sbjct: 315 FGHAISNLESINENVNASRSRIVDTDYAKETTQMTKSQILQQAGTSVLAQAKQSPSAALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|254506892|ref|ZP_05119031.1| flagellin D [Vibrio parahaemolyticus 16]
gi|219550177|gb|EED27163.1| flagellin D [Vibrio parahaemolyticus 16]
Length = 377
Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats.
Identities = 44/365 (12%), Positives = 108/365 (29%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +AM+A + L + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVAAMTAQRYLNSATNAQQTSMERLSSGSKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + N + +
Sbjct: 124 NRIAETTSFGGNKLLNGTFTTKSMQIGADNGEAVMLTLNDMRSDNVGMGGTSYKAENGKN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + T +
Sbjct: 184 KDWSVQAGSNDLTITLTPKDGEEQTINISAKEGDDIEELATYINGQTDMVKASVDEDGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + G + T + + + N + S
Sbjct: 244 QVFAGTNKVEGEVSFGGGLAGELGMQDGQAVTVDTINVTSVGGAQESVAIIDAALNYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D + ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTAMTKSQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 40/362 (11%), Positives = 93/362 (25%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N T + + S S+I + + + N ++ +
Sbjct: 15 QRYLNSATNAQQTSMERLSSGSKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + N G+ + S
Sbjct: 135 NKLLNGTFTTKSMQIGADNGEAVMLTLNDMRSDNVGMGGTSYKAENGKNKDWSVQAGSND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + N + T G T+ A V T
Sbjct: 195 LTITLTPKDGEEQTINISAKEGDDIEELATYINGQTDMVKASVDEDGKLQVFAGTNKVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ +G + +T +E V+ ID + + ++G+ +R
Sbjct: 255 EVSFGGGLAGELGMQDGQAVTVDTINVTSVGGAQESVAIIDAALNYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + + V R+ D D A E+T ++ Q Q + L+ + LS
Sbjct: 315 FNHAINNLDNINENVNASKSRIKDTDFAKETTAMTKSQILSQASSSILAQAKQAPNSALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|261211313|ref|ZP_05925601.1| flagellin protein FlaD [Vibrio sp. RC341]
gi|260839268|gb|EEX65894.1| flagellin protein FlaD [Vibrio sp. RC341]
Length = 377
Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 68/183 (37%), Gaps = 3/183 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M + +++ +++ D +IQ EIT L +L
Sbjct: 64 AVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSSNGSNSKADRIAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A +SF G L + + I + + + + +
Sbjct: 124 NRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNVLMGGKTYQAANGKD 183
Query: 180 STD 182
Sbjct: 184 KNW 186
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 34/362 (9%), Positives = 86/362 (23%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
T + + S +I + + + N ++ +
Sbjct: 15 QRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGVAVRNANDGISM 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S D + +
Sbjct: 75 AQTAEGAMKETTNILQRMRDLSLQSSNGSNSKADRIAIQEEITALNDELNRVAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + +
Sbjct: 135 NKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNVLMGGKTYQAANGKDKNWGVEAGKND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + + T G T+ A V +
Sbjct: 195 LTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMVKASVSEEGKLQLFTDSNKVDG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T +E V+ +D +K + ++G+ +R
Sbjct: 255 AATFGGSLAGELGIGAAKDVTVDTLDVTTVGGAQESVAIVDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + + V R+ D D A E+T L+ Q Q + L+ + L+
Sbjct: 315 FNHAINNLDNINENVNASTSRIKDTDFAKETTALTKAQILSQASSSVLAQAKQAPNSALA 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|114320064|ref|YP_741747.1| flagellar hook-associated protein 3 [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226458|gb|ABI56257.1| flagellar hook-associated protein 3 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 408
Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats.
Identities = 49/435 (11%), Positives = 114/435 (26%), Gaps = 47/435 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T+ A+ + +L Q +++SG ++ +D+ A S ++ +
Sbjct: 3 LSTSQLALQGVNSILSQQASLSKTQAQLASGRQILTPSDDPAGASRILELEKAINTVERY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLR 120
+ +++ +++ +++ + + ++ D ++ SE+ Q Q QL
Sbjct: 63 NRNADQAETRLGLSENILNEFGNTLQRVRELSVQAANGSQDRETRAYIASELRQAQDQLV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A NGE + + D G+ ++
Sbjct: 123 QLANTDDGNGEFLFAGSETRTQPFTKTAGGKVVYNGDQGQREVRIGPSRTLAVD------ 176
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
S+
Sbjct: 177 -------------------------------------SSGFDAFMKIPNGNGDYQAREAQ 199
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
G I V A P + + + + + + + V
Sbjct: 200 GNSGSGIITVGDSPALVQPGEAYTIAFEQDGAGGMTYRVLDGDDQPVAVDGEPVTGPYEP 259
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM-VTLNITRHANTDAYNEKL 359
+ +D D + S + L T + D
Sbjct: 260 GMTLRFPAESGQSLQVKLDGRPEEGDRFEVSAARPQSVFETVNNLIRTLEDDGDGPALNN 319
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A+ ++ ID ++ ++G+ + + D + + RL D D A +
Sbjct: 320 AVNRFLADIDQGMENIIRVRSELGARLNTLDASRDANEGALLDLNAAKSRLADLDYAEAT 379
Query: 420 TRLSALQTQQQLAVQ 434
R + Q A Q
Sbjct: 380 GRFNQELVGLQAAQQ 394
>gi|291280173|ref|YP_003497008.1| flagellin [Deferribacter desulfuricans SSM1]
gi|290754875|dbj|BAI81252.1| flagellin [Deferribacter desulfuricans SSM1]
Length = 496
Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats.
Identities = 68/450 (15%), Positives = 142/450 (31%), Gaps = 7/450 (1%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
A + + ++ +R+S+G R++ A D+ A IA +KS + + +
Sbjct: 41 VPAGNILNSINQSTNSINSSIERLSTGKRLNSAKDSPAEIGIAAKLKSAIDSHKRLMQNL 100
Query: 68 GLGSSKVDIAK---AGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLRD 121
S A +G S +D++++I+ KI A S I Q+E+ L ++ +
Sbjct: 101 QDAISLFQTADYSISGSSGLLDILNSIREKIIAAGNGTLTSSDINLIQNEVNDLVDEIDN 160
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
FN + L D ++ + + V + N T T +
Sbjct: 161 STTSIEFNTKKLLNGDYLATITTSSADVNAYALDRLNTTTLELTNITGATYNTYQIGPYD 220
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
T + ++ D + I++
Sbjct: 221 SSTLTSEGTFVIQGNDNAISINWSASDTLEDIANRINSYNDVAKAEVVTSGANTYLQITS 280
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSP-SVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + L ++ G + + + + + + N +
Sbjct: 281 LEKGVAGRISLSDLSGNFISSQGATETDAGNDASLTYNGTTYTSQTGEFTDVYNNLVIKV 340
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
N A + V + D + L +
Sbjct: 341 ADNANVPNATISINDKTVSIPLDIEGGTQLNVYIKDLTPESLGLKDVNGDYAIDLSTSSG 400
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ +S ID I T+ A +IGS+ + ++ Q D I + ++D D+A E
Sbjct: 401 RTKALSLIDNIISRVTSEASRIGSMENTLNYQIDQITSYNLNLSSSYSNIMDTDIAEEMA 460
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
+L+ Q Q Q + L+ N + +++L
Sbjct: 461 KLTTQQLQLQTSTLMLTKRNELISSVINLL 490
>gi|262166245|ref|ZP_06033982.1| flagellin protein FlaD [Vibrio mimicus VM223]
gi|262025961|gb|EEY44629.1| flagellin protein FlaD [Vibrio mimicus VM223]
Length = 377
Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats.
Identities = 45/365 (12%), Positives = 108/365 (29%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +AM+A + L + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVAAMTAQRYLNGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ EIT L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A +SF G L + + I + + +
Sbjct: 124 NRVAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLSLKDMRSDNRMMGGTSYVATEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
E ++ + T
Sbjct: 184 KNWKVEAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + + +G+ T + + V + + S
Sbjct: 244 QIFAGNNKVTGDVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDSALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D L ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 35/362 (9%), Positives = 91/362 (25%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N T + + S +I + + + N ++ +
Sbjct: 15 QRYLNGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELNRVAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + + + +
Sbjct: 135 NKLLNGTFSTKSFQIGADNGEAVMLSLKDMRSDNRMMGGTSYVATEGKDKNWKVEAGAND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + + T G T+ A V +
Sbjct: 195 ITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEKGQLQIFAGNNKVTG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T ++ V+ ID+ +K + ++G+ +R
Sbjct: 255 DVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDSALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T L+ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSILAQAKQAPNAALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|254226371|ref|ZP_04919960.1| flagellin FlaD [Vibrio cholerae V51]
gi|297582041|ref|ZP_06943960.1| flagellin FlaD [Vibrio cholerae RC385]
gi|125621121|gb|EAZ49466.1| flagellin FlaD [Vibrio cholerae V51]
gi|297533736|gb|EFH72578.1| flagellin FlaD [Vibrio cholerae RC385]
Length = 377
Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats.
Identities = 45/365 (12%), Positives = 108/365 (29%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +AM+A + L + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ EIT L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVATEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ ++ + T
Sbjct: 184 KDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + + +G+ T + + V + + S
Sbjct: 244 QIFAGNNKVTGDVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDSALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D L ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 34/362 (9%), Positives = 89/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
T + + S +I + + + N ++ +
Sbjct: 15 QRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + + +
Sbjct: 135 NKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVATEGKDKDWKVQAGAND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + + T G T+ A V +
Sbjct: 195 ITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEKGQLQIFAGNNKVTG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T ++ V+ ID+ +K + ++G+ +R
Sbjct: 255 DVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDSALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T L+ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPNAALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|134095066|ref|YP_001100141.1| flagellin [Herminiimonas arsenicoxydans]
gi|133738969|emb|CAL62017.1| flagellin [Herminiimonas arsenicoxydans]
Length = 638
Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 67/162 (41%), Gaps = 3/162 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN S+++A + L L R+SSGLR++ A D+AA +I++ + L+
Sbjct: 3 AVINTNISSLNAQRNLSTSQTALSTSLQRLSSGLRINSAKDDAAGLAISERFSTQIRGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ +++ + + I+ +D ++ +E QL+++
Sbjct: 63 TAIRNANDGISLAQTAEGALTEIGNNLQRIRELAVQSANSTNSSSDRAALNAEAQQLKAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
++ +A +SFN L + + + +
Sbjct: 123 IQRVAEETSFNDTKLLDGKFANQVFQVGANQGQTINIAQIAN 164
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 43/98 (43%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ L + +D + +A ++G++ +R + + + R++D D
Sbjct: 541 ISDALGANNAILAMDAALTSVNSARAELGAVQNRFGSVVANLGTNAENLSSSRSRILDTD 600
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
A+E+ L+ Q QQ L+ N+ +L+L RG
Sbjct: 601 FAAETANLTRGQILQQAGTAMLAQANSLPNGVLALLRG 638
>gi|150388630|ref|YP_001318679.1| flagellin domain-containing protein [Alkaliphilus metalliredigens
QYMF]
gi|149948492|gb|ABR47020.1| flagellin domain protein [Alkaliphilus metalliredigens QYMF]
Length = 292
Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A+SA + L + +R+SSG R++ A+D+AA +I++ M+S L
Sbjct: 3 INNNIPALSAHRLLSRNSELSSKTLERLSSGKRINRASDDAAGMAISEKMRSQIKGLRMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S G S + A+ M++ ++ ++ G G D +I++E+ +L ++
Sbjct: 63 SKNALDGISLIQTAEGAMNEIHSMLQRMRELAVQGANGIYDGDDVSAIKNEMNELVEEIE 122
Query: 121 DIARGSSFNGENWLRT 136
I+ + FN + L+
Sbjct: 123 SISENTKFNDKAILKH 138
Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 38/96 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ++ I++ IK + K+G+ +R+ + + + + R+ D D
Sbjct: 196 FTNNEEAAKAITTIESAIKMVSDERSKLGAFQNRLEHTISNVDNTAENLTAAMSRIEDLD 255
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA E + + L Q L+ N IL L
Sbjct: 256 MALEMSEFTKLNILIQSGTAMLAQANQRPQSILQLL 291
>gi|325650984|emb|CCA29941.1| flagellin [Escherichia coli]
Length = 416
Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 60/154 (38%), Gaps = 3/154 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + I+ SIQ+EITQ ++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRIRELSVQATNGTNSDSDLSSIQAEITQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
++ + FNG L + A
Sbjct: 124 DRVSEQTQFNGVKVLAENNEMKIQVGANDGETIT 157
>gi|303246039|ref|ZP_07332320.1| flagellin domain protein [Desulfovibrio fructosovorans JJ]
gi|302492435|gb|EFL52306.1| flagellin domain protein [Desulfovibrio fructosovorans JJ]
Length = 383
Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats.
Identities = 53/365 (14%), Positives = 101/365 (27%), Gaps = 3/365 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N AM+A++ L D L R+SSGLR++ AAD+AA ++ ++M+SD ++
Sbjct: 5 INHNMMAMNAARNLSDNYGALSTSTQRLSSGLRINSAADDAAGLAVRELMRSDIATMNQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S A G+ + ++ +K I SE + S+++
Sbjct: 65 VRNANDAVSLCQTADGGLQIIDEKLTRMKELAEQAATGTYTSDQRLIIDSEYQAMASEIQ 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG L L + + + G + DYY T +++
Sbjct: 125 RIAVATDFNGIKLLDESLWFGNYTTGTGDFQNGVTIHFGTGNDSAEDYYSISTTRSMEAY 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + I+ Q + + N
Sbjct: 185 WLSDGLGLVTTTDRVIERAGQGAYSWTMGQNVERDKQGLPLMTSTESDQNRTMINNDLSQ 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
T + + N A T ++
Sbjct: 245 YVDDQRTAWIAAHSQTEWDNLDYHEKQRTEIGWAKEETSNIATTGNLSSGEVLHGWGNWV 304
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+S Y ++ +++ I
Sbjct: 305 GQGADSWAGSFDGNTVYTQDDAQKGGCFVVSAGRTAIKSYPLSVVIFSRHTWPMRQGPPG 364
Query: 361 MEEMV 365
+ M+
Sbjct: 365 NQPML 369
>gi|15642142|ref|NP_231774.1| flagellin [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121586802|ref|ZP_01676584.1| flagellin FlaD [Vibrio cholerae 2740-80]
gi|121727182|ref|ZP_01680349.1| flagellin FlaD [Vibrio cholerae V52]
gi|147675484|ref|YP_001217666.1| flagellin [Vibrio cholerae O395]
gi|153213251|ref|ZP_01948663.1| flagellin FlaD [Vibrio cholerae 1587]
gi|153801626|ref|ZP_01956212.1| flagellin FlaD [Vibrio cholerae MZO-3]
gi|153818799|ref|ZP_01971466.1| flagellin FlaD [Vibrio cholerae NCTC 8457]
gi|153822611|ref|ZP_01975278.1| flagellin FlaD [Vibrio cholerae B33]
gi|153825621|ref|ZP_01978288.1| flagellin FlaD [Vibrio cholerae MZO-2]
gi|153828611|ref|ZP_01981278.1| flagellin FlaD [Vibrio cholerae 623-39]
gi|227082268|ref|YP_002810819.1| flagellin FlaD [Vibrio cholerae M66-2]
gi|229507772|ref|ZP_04397277.1| flagellin protein FlaD [Vibrio cholerae BX 330286]
gi|229511991|ref|ZP_04401470.1| flagellin protein FlaD [Vibrio cholerae B33]
gi|229513794|ref|ZP_04403256.1| flagellin protein FlaD [Vibrio cholerae TMA 21]
gi|229519127|ref|ZP_04408570.1| flagellin protein FlaD [Vibrio cholerae RC9]
gi|229522096|ref|ZP_04411513.1| flagellin protein FlaD [Vibrio cholerae TM 11079-80]
gi|229528845|ref|ZP_04418235.1| flagellin protein FlaD [Vibrio cholerae 12129(1)]
gi|229607317|ref|YP_002877965.1| flagellin [Vibrio cholerae MJ-1236]
gi|254291380|ref|ZP_04962173.1| flagellin FlaD [Vibrio cholerae AM-19226]
gi|254849229|ref|ZP_05238579.1| flagellin FlaD [Vibrio cholerae MO10]
gi|255745120|ref|ZP_05419069.1| flagellin protein FlaD [Vibrio cholera CIRS 101]
gi|262153492|ref|ZP_06028622.1| flagellin protein FlaD [Vibrio cholerae INDRE 91/1]
gi|262167502|ref|ZP_06035208.1| flagellin protein FlaD [Vibrio cholerae RC27]
gi|262192270|ref|ZP_06050427.1| flagellin protein FlaD [Vibrio cholerae CT 5369-93]
gi|298497835|ref|ZP_07007642.1| flagellin FlaD [Vibrio cholerae MAK 757]
gi|172044518|sp|P0C6C6|FLAD_VIBCH RecName: Full=Flagellin D
gi|172047634|sp|A5F6C5|FLAD_VIBC3 RecName: Full=Flagellin D
gi|9656695|gb|AAF95288.1| flagellin FlaD [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121548969|gb|EAX59008.1| flagellin FlaD [Vibrio cholerae 2740-80]
gi|121630427|gb|EAX62820.1| flagellin FlaD [Vibrio cholerae V52]
gi|124116051|gb|EAY34871.1| flagellin FlaD [Vibrio cholerae 1587]
gi|124122803|gb|EAY41546.1| flagellin FlaD [Vibrio cholerae MZO-3]
gi|126510642|gb|EAZ73236.1| flagellin FlaD [Vibrio cholerae NCTC 8457]
gi|126519859|gb|EAZ77082.1| flagellin FlaD [Vibrio cholerae B33]
gi|146317367|gb|ABQ21906.1| flagellin FlaD [Vibrio cholerae O395]
gi|148875882|gb|EDL74017.1| flagellin FlaD [Vibrio cholerae 623-39]
gi|149740772|gb|EDM54871.1| flagellin FlaD [Vibrio cholerae MZO-2]
gi|150422710|gb|EDN14664.1| flagellin FlaD [Vibrio cholerae AM-19226]
gi|227010156|gb|ACP06368.1| flagellin FlaD [Vibrio cholerae M66-2]
gi|227014039|gb|ACP10249.1| flagellin FlaD [Vibrio cholerae O395]
gi|229332619|gb|EEN98105.1| flagellin protein FlaD [Vibrio cholerae 12129(1)]
gi|229341021|gb|EEO06026.1| flagellin protein FlaD [Vibrio cholerae TM 11079-80]
gi|229343816|gb|EEO08791.1| flagellin protein FlaD [Vibrio cholerae RC9]
gi|229348975|gb|EEO13932.1| flagellin protein FlaD [Vibrio cholerae TMA 21]
gi|229351956|gb|EEO16897.1| flagellin protein FlaD [Vibrio cholerae B33]
gi|229355277|gb|EEO20198.1| flagellin protein FlaD [Vibrio cholerae BX 330286]
gi|229369972|gb|ACQ60395.1| flagellin protein FlaD [Vibrio cholerae MJ-1236]
gi|254844934|gb|EET23348.1| flagellin FlaD [Vibrio cholerae MO10]
gi|255736950|gb|EET92346.1| flagellin protein FlaD [Vibrio cholera CIRS 101]
gi|262024074|gb|EEY42769.1| flagellin protein FlaD [Vibrio cholerae RC27]
gi|262030729|gb|EEY49363.1| flagellin protein FlaD [Vibrio cholerae INDRE 91/1]
gi|262031880|gb|EEY50461.1| flagellin protein FlaD [Vibrio cholerae CT 5369-93]
gi|297542168|gb|EFH78218.1| flagellin FlaD [Vibrio cholerae MAK 757]
Length = 377
Score = 130 bits (325), Expect = 5e-28, Method: Composition-based stats.
Identities = 45/365 (12%), Positives = 108/365 (29%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +AM+A + L + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ EIT L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ ++ + T
Sbjct: 184 KDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + + +G+ T + + V + + S
Sbjct: 244 QIFAGNNKVTGDVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDSALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D L ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 34/362 (9%), Positives = 89/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
T + + S +I + + + N ++ +
Sbjct: 15 QRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + + +
Sbjct: 135 NKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAEGKDKDWKVQAGAND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + + T G T+ A V +
Sbjct: 195 ITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEKGQLQIFAGNNKVTG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T ++ V+ ID+ +K + ++G+ +R
Sbjct: 255 DVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDSALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T L+ Q Q + L+ + LS
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPNAALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|306817818|ref|ZP_07451558.1| flagellin domain protein [Mobiluncus mulieris ATCC 35239]
gi|304649400|gb|EFM46685.1| flagellin domain protein [Mobiluncus mulieris ATCC 35239]
Length = 468
Score = 130 bits (325), Expect = 6e-28, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 24 LEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSK 83
L +++SSG R++ AAD+AA +I++ ++S G G S V A+ +++
Sbjct: 39 LAKSLEKLSSGFRINRAADDAAGLAISEGLRSQVGGNRQAVRNAQDGISLVQTAEGALNE 98
Query: 84 AIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGS 140
++ ++ G +I +E+ QL+ +L I + ++FNG N L
Sbjct: 99 VHSILQRMRTLAVQGATDSNSGEARNNINTELNQLREELERIGKVTNFNGTNLLNGSASG 158
Query: 141 STA 143
A
Sbjct: 159 PNA 161
>gi|148979885|ref|ZP_01815763.1| flagellin [Vibrionales bacterium SWAT-3]
gi|145961577|gb|EDK26878.1| flagellin [Vibrionales bacterium SWAT-3]
Length = 377
Score = 130 bits (325), Expect = 6e-28, Method: Composition-based stats.
Identities = 45/365 (12%), Positives = 112/365 (30%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R++SG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLASGSKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSSNGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + +T
Sbjct: 124 NRIAETTSFGGNKLLNGTYGTQSFQIGADNGEAVMLNLKDMRSDNAQMGGKSYQTENAKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + Q + + S +
Sbjct: 184 KDWNVQAGSNDLKLSFTDNFGQAQEIDISAKAGDDIEELATYINGQQDSVKASVTEDGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + + + T + + + + S
Sbjct: 244 QMFAGNNKVSGDVSFSGGLAGELGIQASKEVTVDTIDVTSVGGAQESVAIIDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D + ++ + + +
Sbjct: 304 HRAELGAFQNRFDHAISNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 38/362 (10%), Positives = 90/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + + S+I + + + N ++ +
Sbjct: 15 QRYLNNANSAQQTSMERLASGSKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + + +S + + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSSNGSNSKAERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + A S
Sbjct: 135 NKLLNGTYGTQSFQIGADNGEAVMLNLKDMRSDNAQMGGKSYQTENAKDKDWNVQAGSND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
S + + + + T G +S A V S
Sbjct: 195 LKLSFTDNFGQAQEIDISAKAGDDIEELATYINGQQDSVKASVTEDGKLQMFAGNNKVSG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + + +T +E V+ ID +K + ++G+ +R
Sbjct: 255 DVSFSGGLAGELGIQASKEVTVDTIDVTSVGGAQESVAIIDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + V R+ D D A E+T+++ Q Q + L+ + LS
Sbjct: 315 FDHAISNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILAQAKQAPNSALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|269961607|ref|ZP_06175969.1| Flagellin A [Vibrio harveyi 1DA3]
gi|269833648|gb|EEZ87745.1| Flagellin A [Vibrio harveyi 1DA3]
Length = 384
Score = 130 bits (325), Expect = 6e-28, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 81/230 (35%), Gaps = 3/230 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + L +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 TVSTNVSAMTAQRYLNKASNELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++A VM +++ + ++I E + L +L
Sbjct: 64 AMRNANDGISIAQTAEGAMNEATSVMQRMRDLAIQSSNGTNSPAERQAINEESSALTDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G + I S + I + +
Sbjct: 124 NRIAETTSFGGRRLLNGSFGEAAFQIGSSSGEAMIMALTSIRADDQRMGGVTFFSENGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
G + + + + D + +LAT
Sbjct: 184 KDWGVDPTKADLKITLPGMGEDEDGNPDDLEISINAKAGDDIEELATYIN 233
Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats.
Identities = 35/370 (9%), Positives = 95/370 (25%), Gaps = 7/370 (1%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQL------RDIARGSSFNGENWLRTDLGSST 142
NK + + + S +I + + S + G S
Sbjct: 15 QRYLNKASNELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISI 74
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A A+ + + + + +
Sbjct: 75 AQTAEGAMNEATSVMQRMRDLAIQSSNGTNSPAERQAINEESSALTDELNRIAETTSFGG 134
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ ++ S +A+ I + + + ++A + +
Sbjct: 135 RRLLNGSFGEAAFQIGSSSGEAMIMALTSIRADDQRMGGVTFFSENGKDKDWGVDPTKAD 194
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ + + + T G ++ A V +
Sbjct: 195 LKITLPGMGEDEDGNPDDLEISINAKAGDDIEELATYINGQSDMINASVSEDGKLQVFVA 254
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNIT-RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ + ++ + +S +D+ +K +
Sbjct: 255 HPNVQGEISISGGLASDLGLSDEAVRTSVQDIDMTTVQGSQNAISVLDSALKYVDSQRAD 314
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G+ +R+ + + +++ V+ R+ D D A E+T+++ Q QQ L+
Sbjct: 315 LGAKQNRLSHSINNLANIQENVDASNSRIKDTDFAKETTQMTKAQILQQAGTSILAQAKQ 374
Query: 442 STARILSLFR 451
+SL +
Sbjct: 375 LPNSAMSLLQ 384
>gi|37654964|gb|AAQ96737.1| flagellin [Burkholderia vietnamiensis]
Length = 430
Score = 130 bits (325), Expect = 6e-28, Method: Composition-based stats.
Identities = 64/427 (14%), Positives = 128/427 (29%), Gaps = 27/427 (6%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
R+SSG R++ AAD+AA +IA M++ L+ G S + A +G+S+
Sbjct: 1 ITRLSSGKRINSAADDAAGLAIATGMQTQINGLNQGVSNSNDGVSMIQTATSGLSQITQS 60
Query: 88 MSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ I+ + ++Q E++Q S++ IA + +NG+N L GS +
Sbjct: 61 LQRIRTLAVQASNGGLTADNRAALQQEVSQQISEVNRIASQTQYNGKNILDGSAGSVSFQ 120
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ +V + + + + +I +L S + G +N
Sbjct: 121 VGANVGQTVSLNLSASLSAASIGAGKVQAGAVLGSVAVSLDSAGKEWKNGVSTGTQITQV 180
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
++ ++A + K L A+ AA N +G
Sbjct: 181 NVLADGKGGYTYTDQNNQQIANSIVEGAGKVFDNTTAGKLALGTNADLTASLAAINANNG 240
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ S + + ++ V I + S +T
Sbjct: 241 PTVSAGTVLGTVSGLDLSTAANGTVTDNAAADIAAQTYPLPSDRITSVTVKSDGNTGFQF 300
Query: 325 LDSRKDLPKEIDSGYSMVTLN------------------------ITRHANTDAYNEKLA 360
D T+ + + +
Sbjct: 301 FDQNGTALTANQIAKIFDPTTAVPTGTLAAATTPPGQYLNVNAAANTQAVSNIDISTQNG 360
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ID + +G+ +R + + ++ DA+ A E+
Sbjct: 361 ANNAMESIDNALTTVNNIQANLGAAQNRFTAIASTQQAQSTDLSTAQSQIQDANFAQETA 420
Query: 421 RLSALQT 427
LS Q
Sbjct: 421 NLSKAQV 427
>gi|90409032|ref|ZP_01217160.1| flagelline [Psychromonas sp. CNPT3]
gi|90309865|gb|EAS38022.1| flagelline [Psychromonas sp. CNPT3]
Length = 566
Score = 130 bits (325), Expect = 6e-28, Method: Composition-based stats.
Identities = 60/372 (16%), Positives = 115/372 (30%), Gaps = 3/372 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ TN ++++ ++L +R+SSGLR++ A D+AA +I+ M+S ++
Sbjct: 4 VVNTNVMSLNSQRQLNKSQALGNQAMERLSSGLRINSAKDDAAGLAISTGMQSQIKGINQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S A+ M + +++ ++ ++ +SIQ E+ QL S+L
Sbjct: 64 AVRNANDGVSMSQTAEGSMDEMTNILQRMRELSVQSANDTNSSSNRQSIQKEVDQLHSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FNG L GS+T I + + + + L
Sbjct: 124 DRIAETTEFNGAKLLNGTAGSTTLQIGANEGQTLTFSIDSVSTNALGLNGDLNKADLNGG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+D N + T + + T+ ++ A+
Sbjct: 184 RVVSAIAESTIDINGVTIGTATDITGNTAQANANVINDKTSETGVMATTYNVVQGASTEA 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+A T + + A T TS + + + S + T
Sbjct: 244 GKAVSGITTGLEIKIGDDATVTLGATSSMSNLVETINRDVGGVTASLDDNGGLLLTNDTG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
TV G T D G + + +
Sbjct: 304 KDITIGGTVDNSGLTAATSTGFIALKSIDGSAISINDKGDPSAGVETLKTGFLVSNGAGT 363
Query: 360 AMEEMVSFIDTQ 371
+ +DT
Sbjct: 364 LTTDSTVALDTA 375
Score = 107 bits (265), Expect = 6e-21, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 47/137 (34%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
++ S G + + ++ ID +
Sbjct: 429 DGSAIEVTSKADGQAAQATALAKIGMGNEMGGKVIRSLGTNVSTMAGASSAITSIDKALG 488
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ + +G++ +R+ ++ + + R+ DAD A E++++S Q QQ
Sbjct: 489 QISGSRAGLGALQNRLGSTISNLENVSQNLSASNSRIQDADFALETSKMSKAQILQQAGT 548
Query: 434 QALSIVNNSTARILSLF 450
L+ N S +LSL
Sbjct: 549 SMLAQANASAKSVLSLL 565
>gi|153834463|ref|ZP_01987130.1| polar flagellin C [Vibrio harveyi HY01]
gi|148869159|gb|EDL68191.1| polar flagellin C [Vibrio harveyi HY01]
Length = 384
Score = 130 bits (325), Expect = 6e-28, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 81/230 (35%), Gaps = 3/230 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L L +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 TVSTNVSAMTAQRYLNKATNELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++A VM +++ + ++I E + L +L
Sbjct: 64 AMRNANDGISIAQTAEGAMNEATSVMQRMRDLAIQSANGTNSPAERQAINEESSALTDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G + I S + I + +
Sbjct: 124 NRIAETTSFGGRRLLNGSFGEAAFQIGSSSGEAMIMALTSIRADDQRMGGVTFFSENGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
G + + + + D + + +LAT
Sbjct: 184 KDWGVDPTKADLKITLPGMGEDEDGNPDDLEININAKTGDDIEELATYIN 233
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 37/370 (10%), Positives = 94/370 (25%), Gaps = 7/370 (1%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQL------RDIARGSSFNGENWLRTDLGSST 142
NK T + + S +I + + S + G S
Sbjct: 15 QRYLNKATNELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISI 74
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A A+ + + + + +
Sbjct: 75 AQTAEGAMNEATSVMQRMRDLAIQSANGTNSPAERQAINEESSALTDELNRIAETTSFGG 134
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ ++ S +A+ I + + + ++A + +
Sbjct: 135 RRLLNGSFGEAAFQIGSSSGEAMIMALTSIRADDQRMGGVTFFSENGKDKDWGVDPTKAD 194
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ N + + T G ++ A V +
Sbjct: 195 LKITLPGMGEDEDGNPDDLEININAKTGDDIEELATYINGQSDMINASVSEDGKLQVFVA 254
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNIT-RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ ++ + +S +D+ +K +
Sbjct: 255 HPNVQGDISISGGLASDLGLSDEAVRTSVQDIDMTTVQGSQNAISVLDSALKYVDSQRAD 314
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G+ +R+ + + +++ V+ R+ D D A E+T+++ Q QQ L+
Sbjct: 315 LGAKQNRLSHSINNLANIQENVDASNSRIKDTDFAKETTQMTKAQILQQAGTSILAQAKQ 374
Query: 442 STARILSLFR 451
+SL +
Sbjct: 375 LPNSAMSLLQ 384
>gi|1169697|sp|P42273|FLIC2_PROMI RecName: Full=Flagellin 2
gi|150887|gb|AAA62397.1| FlaB [Proteus mirabilis]
Length = 367
Score = 130 bits (325), Expect = 6e-28, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 63/154 (40%), Gaps = 3/154 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN+ ++ L L +R+SSG+R++ A D+AA +IA S+ L+
Sbjct: 4 VINTNYLSLVTQNNLNRSQSALGNAIERLSSGMRINSAKDDAAGQAIANRFTSNINGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + I+ +D SIQ+E+ Q ++
Sbjct: 64 ASRNANDGISVSQTTEGALNEINNNLQRIRELTVQAKNGTNSNSDINSIQNEVNQRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
++ + FNG L + T + +
Sbjct: 124 NRVSEQTQFNGVKVLSGEKSKMTIQVGTNDNEVI 157
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 43/358 (12%), Positives = 96/358 (26%)
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
S+S + S I + S+ + ++ +
Sbjct: 10 LSLVTQNNLNRSQSALGNAIERLSSGMRINSAKDDAAGQAIANRFTSNINGLTQASRNAN 69
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ ++ + + + + + I+ E D V +
Sbjct: 70 DGISVSQTTEGALNEINNNLQRIRELTVQAKNGTNSNSDINSIQNEVNQRLDEINRVSEQ 129
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ K + N + I + + T +
Sbjct: 130 TQFNGVKVLSGEKSKMTIQVGTNDNEVIEFNLDKIDNDTLGVASDKLFDAKTEKKGVTAA 189
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ +G S T + S+ V N S + + K
Sbjct: 190 GDAIDANALGISGSKKYVTGISVKEYKVDGKVSSDKVVLNDGSDDYIVSKSDFTLKSGTT 249
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ ++ ++ ++ +D I + K+G+I +R
Sbjct: 250 TGEVEFTGSKTTKFTADAGKDVKVLNVKDDALATLDNAISKVDESRSKLGAIQNRFQSTI 309
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + + R++DAD A+E + +S Q QQ L+ N +LSL R
Sbjct: 310 NNLNNTVNNLSASRSRILDADYATEVSNMSKNQILQQAGTAVLAQANQVPQTVLSLLR 367
>gi|153834140|ref|ZP_01986807.1| polar flagellin A [Vibrio harveyi HY01]
gi|148869510|gb|EDL68508.1| polar flagellin A [Vibrio harveyi HY01]
Length = 376
Score = 130 bits (325), Expect = 6e-28, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 84/221 (38%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 NVNTNVSAMTAQRYLNQAAEGQQKSMERLSSGYKINSAKDDAAGLQISNRLNAQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
G S +A+ M+++ +++ +++ +IQ E+T L +L
Sbjct: 64 AVKNANDGISIAQVAEGAMNESTNILQRMRDLSLQSANGSNSRSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + T+
Sbjct: 124 NRIAETTSFGGNKLLNGTYGTQSFQIGADSGEAVMLSMGNLRSDTSAMGGKSYAAEDGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
++ L ++ K + I+ D ++T
Sbjct: 184 ASWTVSDKTELKMSYTNKQGEEKELTINAKQGDDIEQLATY 224
Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+E V+ ID +K + +G+ +R + + + + V R+ D D
Sbjct: 280 VTSVAGSQEAVAIIDGALKSVDSQRASLGAFQNRFNHAISNLDNINENVNASNSRIKDTD 339
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A E+T ++ Q QQ + L+ S + LSL
Sbjct: 340 YAKETTAMTKSQILQQASTSILAQAKQSPSAALSLL 375
>gi|45441370|ref|NP_992909.1| flagellin [Yersinia pestis biovar Microtus str. 91001]
gi|229896288|ref|ZP_04511458.1| thermoregulated motility protein [Yersinia pestis Pestoides A]
gi|45436230|gb|AAS61786.1| thermoregulated motility protein [Yersinia pestis biovar Microtus
str. 91001]
gi|229701211|gb|EEO89240.1| thermoregulated motility protein [Yersinia pestis Pestoides A]
Length = 369
Score = 130 bits (325), Expect = 6e-28, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 77/256 (30%), Gaps = 3/256 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQS 117
+ + G S + +++ + + ++ S SIQ EI+ +
Sbjct: 61 TQAARNANDGISIAQTTEGSLNEINNNLQRVRELTVQAQNGSNSSSDLDSIQDEISLRLA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ ++ + FNG+ L + S A I + + Y
Sbjct: 121 EIDRVSDQTQFNGKKVLAENTTMSIQVGANDGETIDINLQKIDSKSLGLGSYSVSGVSGA 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+S T G+ + K
Sbjct: 181 LTSLTDTSVTGVTTTTALDFSDISTFAKGATVHGIGDVGTDGAYADGYVIRTTDGKQYKG 240
Query: 238 TFDQAKGIATIPVPLP 253
D G T
Sbjct: 241 EVDATNGKVTFADDAN 256
Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/357 (11%), Positives = 90/357 (25%)
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+ + S E ++ ++ T A++
Sbjct: 12 LTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGI 71
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ + I+ L L + +G+ LD D
Sbjct: 72 SIAQTTEGSLNEINNNLQRVRELTVQAQNGSNSSSDLDSIQDEISLRLAEIDRVSDQTQF 131
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+G + + + K + + + + + S +
Sbjct: 132 NGKKVLAENTTMSIQVGANDGETIDINLQKIDSKSLGLGSYSVSGVSGALTSLTDTSVTG 191
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ T + + + + T + I V T + + +
Sbjct: 192 VTTTTALDFSDISTFAKGATVHGIGDVGTDGAYADGYVIRTTDGKQYKGEVDATNGKVTF 251
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
D+ + A A + +D IK +G++ +R
Sbjct: 252 ADDANGDPIDDATKLEAAAQFSPAGKATASPLETLDDAIKQVDGLRSSLGAVQNRFESAV 311
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + R+ D D A+E + +S Q QQ LS N +LSL
Sbjct: 312 TNLNNTVTNLTSARSRIEDVDYATEVSNMSRAQILQQAGTSVLSQANQVPQTVLSLL 368
>gi|29570533|gb|AAO85383.1| flagellin [Yersinia pseudotuberculosis]
Length = 369
Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 78/256 (30%), Gaps = 3/256 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQS 117
+ + G S + +++ + + ++ +D SIQ EI+ +
Sbjct: 61 TQAARNANDGISIAQTTEGSLNEINNNLQRVRELTVQAQKGSNSSSDLDSIQDEISLRLA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ ++ + FNG+ L + S A I + + Y
Sbjct: 121 EIDRVSDQTQFNGKKVLAENTTMSIQVGANDGETIDINLQKIDSKSLGLGSYSVSGVSGA 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+S T G+ + K
Sbjct: 181 LTSLTDTSVTGVTTTTALDFSDISTFAKGATVHGIGDVGTDGAYADGYVIRTTDGKQYKG 240
Query: 238 TFDQAKGIATIPVPLP 253
D G T
Sbjct: 241 EVDATNGKVTFADDAN 256
Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats.
Identities = 43/357 (12%), Positives = 90/357 (25%)
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+ + S E ++ ++ T A++
Sbjct: 12 LTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGI 71
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ + I+ L L + G+ LD D
Sbjct: 72 SIAQTTEGSLNEINNNLQRVRELTVQAQKGSNSSSDLDSIQDEISLRLAEIDRVSDQTQF 131
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+G + + + K + + + + + S +
Sbjct: 132 NGKKVLAENTTMSIQVGANDGETIDINLQKIDSKSLGLGSYSVSGVSGALTSLTDTSVTG 191
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ T + + + + T + I V T + + +
Sbjct: 192 VTTTTALDFSDISTFAKGATVHGIGDVGTDGAYADGYVIRTTDGKQYKGEVDATNGKVTF 251
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
D+ + A A + +D IK +G++ +R
Sbjct: 252 ADDANGDPIDDATKLEAAAQFSPAGKATASPLETLDDAIKQVDGLRSSLGAVQNRFESAV 311
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + R+ DAD A+E + +S Q QQ LS N +LSL
Sbjct: 312 TNLNNTVTNLTSARSRIEDADYATEVSNMSRAQILQQAGTSVLSQANQVPQTVLSLL 368
>gi|260767717|ref|ZP_05876652.1| flagellin protein FlaF [Vibrio furnissii CIP 102972]
gi|260617226|gb|EEX42410.1| flagellin protein FlaF [Vibrio furnissii CIP 102972]
Length = 378
Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats.
Identities = 48/357 (13%), Positives = 99/357 (27%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SA+ A + L L +R+SSG R++ A D+AA I+ ++S L
Sbjct: 4 TVNTNVSALVAQRHLNTATDLLNQSLERLSSGNRINSAKDDAAGLQISNRLESQMRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M + ++ +++ + ++Q E++ L ++
Sbjct: 64 AVRNANDGISIMQTAEGAMQETTSLLQRMRDLSLQSANGSNSKAERVALQEEMSALNDEM 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G ++ I S + +
Sbjct: 124 NRIAETTSFGGRKLLNGSFGQTSFQIGASSGEAVQVSLKNMRSDDLNMGGFSYVAAGEAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + + + T +
Sbjct: 184 SQWQVGAGRNQLTISFTNAQGEDEQIHIHAKQGDDIEQLATYINGQTDKVSASVNDKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + T + + V T + S
Sbjct: 244 QLYMAGKETAGTLSFSGNLADELQMNLKGYEAVDNLDITSVGGAQRAVSVLDTALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + G+ +D L + K K+ D + + +
Sbjct: 304 HRAELGALQNRFGHAVSNLDNVHENLAASKSRIKDTDYAKETTQMIKQQILQQVGTS 360
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/375 (11%), Positives = 101/375 (26%), Gaps = 11/375 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+A+ ++ A D+++ ++ + + + +
Sbjct: 13 VAQRHLNTATDLLNQSLERL-----SSGNRINSAKDDAAGLQISNRLESQMRGLDVAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + ++ + +
Sbjct: 68 ANDGISIMQTAEGAMQETTSLLQRMRDLSLQSANGSNSKAERVALQEEMSALNDEMNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ S S I + S +++ + +A
Sbjct: 128 ETTSFGGRKLLNGSFGQTSFQIGASSGEAVQVSLKNMRSDDLNMGGFSYVAAGEANSQWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A S + + DI AT N T + + ++
Sbjct: 188 VGAGRNQLTISFTNAQGEDEQIHIHAKQGDDIEQLATYINGQTDKVSASVNDKGQLQLYM 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+T T S + + + + VS +DT +K
Sbjct: 248 AGKETAGTLSFSGNLADELQMNLKGYEA------VDNLDITSVGGAQRAVSVLDTALKYV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ ++G++ +R + + + + R+ D D A E+T++ Q QQ+
Sbjct: 302 DSHRAELGALQNRFGHAVSNLDNVHENLAASKSRIKDTDYAKETTQMIKQQILQQVGTSI 361
Query: 436 LSIVNNSTARILSLF 450
L+ N L+L
Sbjct: 362 LAQAKNQPNVALTLL 376
>gi|284041548|ref|YP_003391888.1| flagellin domain protein [Conexibacter woesei DSM 14684]
gi|283945769|gb|ADB48513.1| flagellin domain protein [Conexibacter woesei DSM 14684]
Length = 266
Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A +A + L + L +R+SSG R++ AAD+AA +I++ ++ G L+
Sbjct: 5 INTNVEAFNAHRNLEGTSSKLAKSMERLSSGFRINRAADDAAGLAISEKLRGQIGGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQSQLR 120
+ G S V A+ +++ ++ ++ TD +I SE+ QL +++
Sbjct: 65 RRNVQDGISLVQTAEGSLTEVHSMLQRVRELKVQHATGTLATTDRDAIVSEVRQLTAEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
I + FNG L S A
Sbjct: 125 RIGDTAQFNGIRLLDARTTISFQVGAN 151
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 37/89 (41%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+S ID I + G++ +R+ + + + ++ + R+ D DMA+E
Sbjct: 178 ATLSEIDRAIGAVSDQRAVFGAVQNRLEHTYNNLSVYQENLTASESRIRDVDMAAEMVNF 237
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ QQ L+ + +LSL R
Sbjct: 238 TKNNILQQAGTSMLAQAQQAPQSVLSLLR 266
>gi|209695748|ref|YP_002263678.1| flagellin [Aliivibrio salmonicida LFI1238]
gi|208009701|emb|CAQ80002.1| flagellin subunit D [Aliivibrio salmonicida LFI1238]
Length = 375
Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 80/228 (35%), Gaps = 3/228 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +L +R+SSGL+++ A D+AA I+ + S L
Sbjct: 4 NVNTNVSAMTAQRYLNNATNDLNSSMERLSSGLKINSAKDDAAGLQISNRLTSQTRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ D +IQ E+ L +L
Sbjct: 64 AVRNANDGISMAQTAEGAMNETTNILQRMRDLSLQSSNGSNTSADRGAIQEEVVALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + N TT
Sbjct: 124 NRIAETTSFGGSRLLNGQFGTKSFQIGSDSGEAVMLTLNNMRSDTTDMGGSTYSATEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
S+ + + + + + +
Sbjct: 184 SSWKVGAENSELTMNFVDKDGKEQNISINAKTGDDIEEVATYINGQSN 231
Score = 97.1 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 33/362 (9%), Positives = 90/362 (24%), Gaps = 2/362 (0%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N T + + S +I + + + + +
Sbjct: 15 QRYLNNATNDLNSSMERLSSGLKINSAKDDAAGLQISNRLTSQTRGLDVAVRNANDGISM 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + + ++S D + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSSNGSNTSADRGAIQEEVVALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
S + + + A + N + + +
Sbjct: 135 SRLLNGQFGTKSFQIGSDSGEAVMLTLNNMRSDTTDMGGSTYSATEGKDSSWKVGAENSE 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + + + + + T G +N+ A V S
Sbjct: 195 LTMNFVDKDGKEQNISINAKTGDDIEEVATYINGQSNAINASVTGEGKLQVFASADASDI 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
K + T + ++ V+ +D+ ++ + +G+ +R
Sbjct: 255 KFGGSLSSELGMGNKVADTVKS--IDVTTVGGSQKAVAILDSAMQYVDSNRADLGAFQNR 312
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
++ + + V ++ D D A E+T ++ Q QQ + L+ + L
Sbjct: 313 FGHAISNLENINENVNASNSQIKDVDFAKETTAMTKAQILQQASSSILAQAKQAPNAALG 372
Query: 449 LF 450
L
Sbjct: 373 LL 374
>gi|226944844|ref|YP_002799917.1| flagellin [Azotobacter vinelandii DJ]
gi|226719771|gb|ACO78942.1| Flagellin [Azotobacter vinelandii DJ]
Length = 567
Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats.
Identities = 67/385 (17%), Positives = 115/385 (29%), Gaps = 3/385 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++ A + L L +R+SSG+R++ A D+AA +IA M S L
Sbjct: 1 MPVINTNITSLIAQKNLSSSQSALTTAMERLSSGMRINSAKDDAAGQAIANRMSSQITGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ G S + + + D + I+ D SIQ+EI Q
Sbjct: 61 TQAQRNANDGISVAQTTEGALDQINDNLQRIRELTVQAQNGTNSSEDLTSIQNEIAQRLD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ I++ + FNG L D + A I + +D + +
Sbjct: 121 EIDRISQETEFNGVKVLSKDTNLNIQVGANDGQSIGISLKQINAKTLGLDGFNVDGSGAT 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ST VL K + T A
Sbjct: 181 QNSTATVTSLEGAGAVKNSTTGNYVLTTTFDEASLERMLGEMKDGDVVTVGSGASTAVEY 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
TF+ A G T A A + S+ + + + V A+ K ++
Sbjct: 241 TFNTASGSFTYTANATNAAAYGDLADELIPPTGSSITGTYEFADGNVATFAVDASGKLTL 300
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
Y +T N + + S +L + T A
Sbjct: 301 DGQAAYVTATGELTNNATSGATQATLEDLFATVGAGAAGTDTSARSLTVGGVTYTGAGTT 360
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKI 382
+ + + + I
Sbjct: 361 AGLSYTDTATSSDVLAASASTVASI 385
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 46/279 (16%), Positives = 79/279 (28%), Gaps = 7/279 (2%)
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ LD G L N L+D+ +V + T L +
Sbjct: 295 SGKLTLDGQAAYVTATGELTNNATSGATQATLEDLFATVGAGAAGTDTSARSLTVGGVTY 354
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
A AT L A+ + + +G S ++ T +
Sbjct: 355 TGAGTTAGLSYTDTATSSDVLAASASTVASIEMHNGITSATIDFDNTGAQSSTGTQVYVD 414
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
T T V VD T D + + G + T
Sbjct: 415 EDGQLTTVGSYTTTFAVNADTGEVTVVDNSDTAGDYALEEGATVYVGSNGRLTTSTTSKG 474
Query: 352 TDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ A++ ++ +D +G+I +R + + + R+
Sbjct: 475 DVTEDPLAALDAALASVDA-------LRSDLGAIQNRFDSAINNLSTTTTNLSAARSRIE 527
Query: 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
DAD A E ++ Q QQ L+ N +LSL
Sbjct: 528 DADYAVEVANMTKAQILQQAGTSVLAQANQVPQSVLSLL 566
>gi|15642186|ref|NP_231818.1| flagellin [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121586269|ref|ZP_01676059.1| flagellin FlaC [Vibrio cholerae 2740-80]
gi|121726543|ref|ZP_01679792.1| flagellin FlaC [Vibrio cholerae V52]
gi|147675419|ref|YP_001217704.1| flagellin [Vibrio cholerae O395]
gi|153817100|ref|ZP_01969767.1| flagellin FlaC [Vibrio cholerae NCTC 8457]
gi|153820801|ref|ZP_01973468.1| flagellin FlaC [Vibrio cholerae B33]
gi|153825320|ref|ZP_01977987.1| flagellin FlaC [Vibrio cholerae MZO-2]
gi|153831273|ref|ZP_01983940.1| flagellin FlaC [Vibrio cholerae 623-39]
gi|227082311|ref|YP_002810862.1| flagellin FlaC [Vibrio cholerae M66-2]
gi|229507735|ref|ZP_04397240.1| flagellin protein FlaD [Vibrio cholerae BX 330286]
gi|229512029|ref|ZP_04401508.1| flagellin protein FlaD [Vibrio cholerae B33]
gi|229513832|ref|ZP_04403294.1| flagellin protein FlaD [Vibrio cholerae TMA 21]
gi|229519165|ref|ZP_04408608.1| flagellin protein FlaD [Vibrio cholerae RC9]
gi|229528807|ref|ZP_04418197.1| flagellin protein FlaD [Vibrio cholerae 12129(1)]
gi|229607280|ref|YP_002877928.1| flagellin [Vibrio cholerae MJ-1236]
gi|254225810|ref|ZP_04919415.1| flagellin FlaC [Vibrio cholerae V51]
gi|254286542|ref|ZP_04961499.1| flagellin FlaC [Vibrio cholerae AM-19226]
gi|254849266|ref|ZP_05238616.1| flagellin FlaC [Vibrio cholerae MO10]
gi|255747113|ref|ZP_05421058.1| flagellin protein FlaD [Vibrio cholera CIRS 101]
gi|262161343|ref|ZP_06030453.1| flagellin protein FlaD [Vibrio cholerae INDRE 91/1]
gi|262167786|ref|ZP_06035488.1| flagellin protein FlaD [Vibrio cholerae RC27]
gi|262191680|ref|ZP_06049856.1| flagellin protein FlaD [Vibrio cholerae CT 5369-93]
gi|298500434|ref|ZP_07010239.1| flagellin FlaC [Vibrio cholerae MAK 757]
gi|172044517|sp|P0C6C5|FLAC_VIBCH RecName: Full=Flagellin C
gi|172047623|sp|A5F671|FLAC_VIBC3 RecName: Full=Flagellin C
gi|2271023|gb|AAC01553.1| flagellin [Vibrio cholerae]
gi|9656742|gb|AAF95332.1| flagellin FlaC [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121549535|gb|EAX59561.1| flagellin FlaC [Vibrio cholerae 2740-80]
gi|121630996|gb|EAX63375.1| flagellin FlaC [Vibrio cholerae V52]
gi|125621716|gb|EAZ50045.1| flagellin FlaC [Vibrio cholerae V51]
gi|126512368|gb|EAZ74962.1| flagellin FlaC [Vibrio cholerae NCTC 8457]
gi|126521593|gb|EAZ78816.1| flagellin FlaC [Vibrio cholerae B33]
gi|146317302|gb|ABQ21841.1| flagellin FlaC [Vibrio cholerae O395]
gi|148873246|gb|EDL71381.1| flagellin FlaC [Vibrio cholerae 623-39]
gi|149741004|gb|EDM55073.1| flagellin FlaC [Vibrio cholerae MZO-2]
gi|150423491|gb|EDN15435.1| flagellin FlaC [Vibrio cholerae AM-19226]
gi|227010199|gb|ACP06411.1| flagellin FlaC [Vibrio cholerae M66-2]
gi|227014083|gb|ACP10293.1| flagellin FlaC [Vibrio cholerae O395]
gi|229332581|gb|EEN98067.1| flagellin protein FlaD [Vibrio cholerae 12129(1)]
gi|229343854|gb|EEO08829.1| flagellin protein FlaD [Vibrio cholerae RC9]
gi|229349013|gb|EEO13970.1| flagellin protein FlaD [Vibrio cholerae TMA 21]
gi|229351994|gb|EEO16935.1| flagellin protein FlaD [Vibrio cholerae B33]
gi|229355240|gb|EEO20161.1| flagellin protein FlaD [Vibrio cholerae BX 330286]
gi|229369935|gb|ACQ60358.1| flagellin protein FlaD [Vibrio cholerae MJ-1236]
gi|254844971|gb|EET23385.1| flagellin FlaC [Vibrio cholerae MO10]
gi|255735515|gb|EET90915.1| flagellin protein FlaD [Vibrio cholera CIRS 101]
gi|262023851|gb|EEY42550.1| flagellin protein FlaD [Vibrio cholerae RC27]
gi|262028654|gb|EEY47308.1| flagellin protein FlaD [Vibrio cholerae INDRE 91/1]
gi|262032419|gb|EEY50981.1| flagellin protein FlaD [Vibrio cholerae CT 5369-93]
gi|297541127|gb|EFH77181.1| flagellin FlaC [Vibrio cholerae MAK 757]
gi|327484708|gb|AEA79115.1| Flagellin protein FlaD [Vibrio cholerae LMA3894-4]
Length = 377
Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats.
Identities = 43/327 (13%), Positives = 90/327 (27%), Gaps = 3/327 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M + +++ +++ D +IQ EIT L +L
Sbjct: 64 AVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A +SF G L + + I + + + + +
Sbjct: 124 NRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAANGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G E + + T
Sbjct: 184 KNWGVEAGKTDLTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMIKASVDEEGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
I A + T + + + + S
Sbjct: 244 QLFTDNNRIDGAATFGGALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + +D + ++
Sbjct: 304 HRAELGAFQNRFNHAINNLDNINENVN 330
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 34/362 (9%), Positives = 84/362 (23%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
T + + S +I + + + N ++ +
Sbjct: 15 QRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGVAVRNANDGISM 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + +S D + +
Sbjct: 75 AQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALNDELNRVAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + +
Sbjct: 135 NKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAANGKDKNWGVEAGKTD 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + + T G T+ A V
Sbjct: 195 LTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMIKASVDEEGKLQLFTDNNRIDG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T +E V+ +D +K + ++G+ +R
Sbjct: 255 AATFGGALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + + V R+ D D A E+T L+ Q Q + L+ + L+
Sbjct: 315 FNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLAQAKQAPNSALA 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|284041546|ref|YP_003391886.1| flagellin domain protein [Conexibacter woesei DSM 14684]
gi|283945767|gb|ADB48511.1| flagellin domain protein [Conexibacter woesei DSM 14684]
Length = 263
Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A +A + L + L +R+SSG R++ AAD+AA +I++ ++ G L+
Sbjct: 5 INTNVEAFNAHRNLESTSGKLAKSMERLSSGFRINRAADDAAGLAISEKLRGQIGGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQSQLR 120
+ G S V A+ +++ ++ ++ TD +I SE+ QL +++
Sbjct: 65 RRNVQDGISLVQTAEGSLTEVHSMLQRVRELAVQHATGTLATTDRGAIMSEVAQLAAEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
I + FNG L S T + + +
Sbjct: 125 RIGTTAQFNGIRLLDGSAASITFQVGANDSETI 157
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 40/93 (43%)
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+ + + IDT I + A G++ +R+ + + + ++ + R+ D DMA+E
Sbjct: 171 MRADAALRDIDTAIANVSDARAVFGAVQNRLEHTYNNLSVYQENLTASESRIRDVDMAAE 230
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ QQ L+ + +LSL R
Sbjct: 231 MVNFTKNNILQQAGTSMLAQAQQAPQSVLSLLR 263
>gi|301165531|emb|CBW25102.1| flagellin subunit [Bacteriovorax marinus SJ]
Length = 282
Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 65/162 (40%), Gaps = 3/162 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L N+ +++SSG R++ A D+AA +I++ +K+ L
Sbjct: 5 INTNVASLNAQRNLSGTRINMNKSLEKLSSGQRINRAGDDAAGLAISENLKAQIKGLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
G S V IA+ + + +++ ++ T+ K + E QL S++
Sbjct: 65 KRNAEDGISLVQIAEGALGEVSNILIRLRELSVQAASDTIGATERKFLNVEFEQLTSEMD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
IA + FN L I R
Sbjct: 125 RIANSTEFNRVPLLNGTGAVFDIQIGTRNDPISDRLTFDASS 166
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 44/97 (45%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+K++ + +S ID+ I + G++ +R+ + I + + + R+ D D
Sbjct: 181 VADKISSQNSLSSIDSAIVSVSGIRADFGALQNRLQSTINNIAVSVENLSAANSRVRDTD 240
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+A+E+ L+ LS N+ST LSL +
Sbjct: 241 IAAETAELTKQNILMTAGTSVLSQANSSTKNALSLIQ 277
>gi|161523331|ref|YP_001578343.1| flagellin domain-containing protein [Burkholderia multivorans ATCC
17616]
gi|189351896|ref|YP_001947524.1| flagellin [Burkholderia multivorans ATCC 17616]
gi|160340760|gb|ABX13846.1| flagellin domain protein [Burkholderia multivorans ATCC 17616]
gi|189335918|dbj|BAG44988.1| flagellin [Burkholderia multivorans ATCC 17616]
Length = 516
Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats.
Identities = 82/516 (15%), Positives = 162/516 (31%), Gaps = 65/516 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQNALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQS 117
+ G S + A +G+S+ + I+ G +D +++Q+E+TQ +
Sbjct: 61 NQGVSNANDGVSMIQTASSGLSQITSSLQRIRQLAVQASSGSLSSSDQQALQTEVTQQIA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG+N L G+ + + +V + + + +I L L
Sbjct: 121 EVNRIASQTNYNGKNLLDGSAGNVSFQVGANVGQTIGLNLTQSLSAASIGKGLVSSGSTL 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + + + I+V G T + A ++ A
Sbjct: 181 GTLNNLNIDSATGGVYNAATSTGYQVTSINVLADGKGGFTFTDQNNQALSNTAVTALFGN 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
T + A A + + + + ++A + + S + T S
Sbjct: 241 TTQGTGTALQLTPQGALASGAVTASQTAAANAANNLANQISGANINASTATLAGQTVASG 300
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ A T++ D G + I + + A
Sbjct: 301 ALGQITGLNLNADGTANVSGNPAAITSIQIYGDGAGGYVFGINGSDATIAANQLSSAAQA 360
Query: 358 KLAMEEMVS----------------------------FIDTQIKCATA------------ 377
L + I++++
Sbjct: 361 ALFTVNATTGANGGQSLDIVAGSPLATGSGFAQTGSNSINSEVSSINTTNVPTTVANIDI 420
Query: 378 -AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR---------------------LVDADM 415
A I + M+ + R + DA+
Sbjct: 421 STAAGANLAMESIDNALATVNNMQANLGAAQNRFTAISTTQQAQSTNLSQAQSQIQDANF 480
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A E+ LS Q QQ + L+ N+ ++L L +
Sbjct: 481 AQETANLSKAQVLQQAGISVLAQANSLPQQVLKLLQ 516
>gi|229524143|ref|ZP_04413548.1| flagellin protein flaB [Vibrio cholerae bv. albensis VL426]
gi|229337724|gb|EEO02741.1| flagellin protein flaB [Vibrio cholerae bv. albensis VL426]
Length = 376
Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 85/221 (38%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L ++ +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 NVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ G ++ ++IQ E++ L +L
Sbjct: 64 AVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L GS + I + + T +
Sbjct: 124 NRIAETTSFGGNKLLNGSFGSKSFQIGADSGEAVMLSMGSMRSDTQAMGGKSYRAQDGKA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ L ++ K I+ D ++T
Sbjct: 184 ADWRVGAATDLTLSYTNKQGEAREVTINAKQGDDLEELATY 224
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/385 (12%), Positives = 101/385 (26%), Gaps = 13/385 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++ A D M ++++G + + +
Sbjct: 4 NVNTNVSAM-TAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQIS-----NRLTSQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + + + + +
Sbjct: 58 SRGLDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVS 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ S S I + S +++
Sbjct: 118 ALNDELNRIAETTSFGGNKLLNGSFGSKSFQIGADSGEAVMLSMGSMRSDTQAMGGKSYR 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A A + + +K + G+ + T G T
Sbjct: 178 AQDGKAADWRVGAATDLTLSYTNKQGEAREVTINAKQGD-------DLEELATYINGQTE 230
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
A VG S+ + G + +E V
Sbjct: 231 DVKASVGEGGKLQLFASSQKVNGDVTIGGGLGGEIGFEAGRDVTVANVDVSTVAGSQEAV 290
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
S +D +K + +G+ +R + + + V R+ D D A E+T ++
Sbjct: 291 SILDGALKAVDSQRASLGAFQNRFGHAISNLDNVNENVNASRSRIRDTDYARETTAMTKA 350
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q QQ + L+ S + LSL
Sbjct: 351 QILQQASTSVLAQAKQSPSAALSLL 375
>gi|315179451|gb|ADT86365.1| Probable flagellin E [Vibrio furnissii NCTC 11218]
Length = 378
Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats.
Identities = 48/357 (13%), Positives = 98/357 (27%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SA+ A + L L +R+SSG R++ A D+AA I+ ++S L
Sbjct: 4 TVNTNVSALVAQRHLNTATDLLHQSLERLSSGNRINSAKDDAAGLQISNRLESQMRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M + ++ +++ + ++Q E+ L ++
Sbjct: 64 AVRNANDGISIMQTAEGAMQETTSLLQRMRDLSLQSANGSNSKAERVALQEEMGALNDEM 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G ++ I S + +
Sbjct: 124 NRIAETTSFGGRKLLNGSFGQTSFQIGASSGEAVQVSLKNMRSDDLNMGGFSYVAAGEAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + + + T +
Sbjct: 184 SQWQVGAGRNQLTISFTNAQGEDEQIHIHAKQGDDIEQLATYINGQTDKVSASVNDKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + T + + V T + S
Sbjct: 244 QLYMAGKETAGTLSFSGNLADELQMNLKGYEAVDNLDITSVGGAQRAVSVLDTALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + G+ +D L + K K+ D + + +
Sbjct: 304 HRAELGALQNRFGHAVSNLDNVHENLAASKSRIKDTDYAKETTQMIKQQILQQVGTS 360
Score = 99.8 bits (246), Expect = 9e-19, Method: Composition-based stats.
Identities = 43/375 (11%), Positives = 100/375 (26%), Gaps = 11/375 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+A+ ++ A D++ ++ + + + +
Sbjct: 13 VAQRHLNTATDLLHQSLERL-----SSGNRINSAKDDAAGLQISNRLESQMRGLDVAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + ++ + +
Sbjct: 68 ANDGISIMQTAEGAMQETTSLLQRMRDLSLQSANGSNSKAERVALQEEMGALNDEMNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ S S I + S +++ + +A
Sbjct: 128 ETTSFGGRKLLNGSFGQTSFQIGASSGEAVQVSLKNMRSDDLNMGGFSYVAAGEANSQWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A S + + DI AT N T + + ++
Sbjct: 188 VGAGRNQLTISFTNAQGEDEQIHIHAKQGDDIEQLATYINGQTDKVSASVNDKGQLQLYM 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+T T + + L + + VS +DT +K
Sbjct: 248 AGKETAGTL------SFSGNLADELQMNLKGYEAVDNLDITSVGGAQRAVSVLDTALKYV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ ++G++ +R + + + + R+ D D A E+T++ Q QQ+
Sbjct: 302 DSHRAELGALQNRFGHAVSNLDNVHENLAASKSRIKDTDYAKETTQMIKQQILQQVGTSI 361
Query: 436 LSIVNNSTARILSLF 450
L+ N L+L
Sbjct: 362 LAQAKNQPNVALTLL 376
>gi|298346039|ref|YP_003718726.1| flagellin family protein [Mobiluncus curtisii ATCC 43063]
gi|298236100|gb|ADI67232.1| flagellin family protein [Mobiluncus curtisii ATCC 43063]
Length = 317
Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 65/167 (38%), Gaps = 3/167 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI N AM++ + L NL +++SSG R++ AAD+++ +I++ ++S
Sbjct: 3 LSINQNIMAMNSYRNLSLTQSNLGKSLEKLSSGFRINRAADDSSGLAISEGLRSQVRGNK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQ 118
G S V A+ +++ D++ ++ I+ E+ QL+ +
Sbjct: 63 QAVKNAQDGISVVQTAEGALNEVHDMLQRMRELAVKGANDTNDSKARAFIEQEMGQLKME 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT 165
L + ++F+G L ++ +
Sbjct: 123 LVRVGASTNFDGRKLLWNGAKVDKDTVVTGSDFAIAETAGKDQAEWW 169
Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 48/150 (32%)
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ S D + + + + ++ A +
Sbjct: 168 WWGKSKGVLAFQVGANGDAQVDDISVQLEDLVTTTLKSLDTKYSVKGTEADIAIKDHKGY 227
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ IDT I + GS+ +R + + + + + R+ D DMASE +
Sbjct: 228 MAEIGKIDTAIHAVSKLRSDFGSVQNRFEHTINNLNVAVENLSASEARIRDTDMASEMMQ 287
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q QQ L+ N +LSL R
Sbjct: 288 FTRGQILQQAGTSMLAQANQVPQTVLSLLR 317
>gi|241763660|ref|ZP_04761710.1| flagellin domain protein [Acidovorax delafieldii 2AN]
gi|241367135|gb|EER61501.1| flagellin domain protein [Acidovorax delafieldii 2AN]
Length = 522
Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 77/172 (44%), Gaps = 3/172 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I TN ++++A + L +L R+SSGLR++ A D+AA +I++ S L+
Sbjct: 3 STINTNVASLTAQRNLGISQGSLNTSIQRLSSGLRINSAKDDAAGLAISERFTSQIKGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S A+ + + D++ ++ +D +++ +E+ QL S+
Sbjct: 63 QAVRNANDGISLAQTAEGALKSSGDILQRVRELAVQSANATNSASDRQALNAEVNQLTSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL 170
L IA+ + FNG L S+ + + + + + +Y +
Sbjct: 123 LDRIAKTTEFNGRKLLDGSFTSAAFQVGANANQTITATSSNFSTSSYGNYRI 174
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 49/137 (35%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
++S + K + T + + + ++ +D I
Sbjct: 386 TLDSSKSFSAVDSKGGATGGFLLAATSTASQMQTVQNMDVSTVDGANRTLAIVDAAISAI 445
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ G++ SR + ++ + + R+ DAD A+E+ LS Q QQ
Sbjct: 446 SGQRAAYGALQSRFETTVNNLQGTSENMSASRSRIQDADFAAETANLSRAQILQQAGTAM 505
Query: 436 LSIVNNSTARILSLFRG 452
++ N +L+L RG
Sbjct: 506 VAQANQLPQGVLALLRG 522
>gi|107100532|ref|ZP_01364450.1| hypothetical protein PaerPA_01001557 [Pseudomonas aeruginosa PACS2]
gi|313106042|ref|ZP_07792301.1| flagellar hook-associated protein 3 [Pseudomonas aeruginosa 39016]
gi|13183734|gb|AAK15325.1|AF332547_2 flagellar hook-associated protein type 3 FlgL [Pseudomonas
aeruginosa]
gi|310878803|gb|EFQ37397.1| flagellar hook-associated protein 3 [Pseudomonas aeruginosa 39016]
Length = 433
Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats.
Identities = 56/436 (12%), Positives = 122/436 (27%), Gaps = 21/436 (4%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + ++ + +L +++S+G R+ AD+ + + G
Sbjct: 3 ISTIQAFNNSVNGISRNYADLNRTFEQISTGKRILTPADDPVGSVRLLRLDQEQGLNEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ + + + + +V+ I+ + D KS+ SE+ Q + +L
Sbjct: 63 KTGMTEAKNSLSQEETILRSVGNVLQRIREIAGQAGDGALDSNDKKSLASELRQREDELL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++ +G+ GS + G + + DS
Sbjct: 123 NLLNSRDASGKYLFSGSQGSVQPFVRNEDGTYSY---MGDESQREVQIASSTRIPVSDSG 179
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
E R +F + A
Sbjct: 180 KVLFEDIVNAARLDTKAAAGNTGDGRISVGLVEDELAFDSQFPASNPPAATDGFNIHFVS 239
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + P LP + + S A + + ++ + T
Sbjct: 240 DKEYVVYDPKSLPPGYDWTTYDPNSPPAWQLSKGAIDDDPKTIDKVLYAGVSVTIDGTPK 299
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G + K G+ + + L + + +G + + A
Sbjct: 300 AGDEFNVNYKPGSEKRSLLNVVSDLRKALESSTDNQAGNDAI---------------RDA 344
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ + GKIG+ + + E FI ++ + ++ D D A +
Sbjct: 345 TAVALTNLSAVAAAVDGGQGKIGARLNTVESTETFIDDVKLVNASVMSQIQDLDYAEALS 404
Query: 421 RLSALQTQQQLAVQAL 436
RLS T A Q+
Sbjct: 405 RLSLQSTIMDAAQQSY 420
>gi|1524311|emb|CAA66928.1| flagellin [Pseudomonas aeruginosa]
Length = 434
Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats.
Identities = 48/434 (11%), Positives = 115/434 (26%), Gaps = 36/434 (8%)
Query: 46 YWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERG 102
IA + + L+ + S A+ + +A ++ I++
Sbjct: 1 GLQIANRLTNQISGLNVATRNADDDISLAQTAEGVLQQATSILQRIRDLALQSANGSNSD 60
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
D ++Q E+ Q +L I+ ++F G L G+++ + + +
Sbjct: 61 VDRAALQKEVAAQQDELTRISDTTTFGGRKLLDGSFGTTSFQVGSNAYETIDISLQNASA 120
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
Y + +S GT + V +K+I ++ D++ I+ K
Sbjct: 121 SAIGSYQVGSNGAGTVASVAGTATASGIASGTVNLVGGGQVKNIAIAAGDSAKAIAEKMD 180
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
A + ++ + + TS S +
Sbjct: 181 GAIPNLSARARTVFTADVSGVTGGSLNFDVTVGSNTVSLAGVTSTQDLADQLNSNSSKLG 240
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL----------- 331
+ I + + + + +
Sbjct: 241 ITASINDKGVLTITSATGENVKFGAQTGTATAGQVAVKVQGSDGKFEAAAKNVVAAGTAA 300
Query: 332 ----------------------PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ + + + + + + ++ +D
Sbjct: 301 TTTVVTGYVQLNSPTAYSVSGTGTQASQVFGNASSSQKSSVASVDISTSDGAQNAIAVVD 360
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ A +G++ SR D + + + R+ D D A+ T + Q Q
Sbjct: 361 NVLAAIDAQRADLGAVQSRFKSTIDNLTNISENATNARSRIKDTDFAASETSALSNQVLQ 420
Query: 430 QLAVQALSIVNNST 443
Q L+ N
Sbjct: 421 QAGTAILAQANQLP 434
>gi|294679041|ref|YP_003579656.1| flagellin protein [Rhodobacter capsulatus SB 1003]
gi|294477861|gb|ADE87249.1| flagellin protein [Rhodobacter capsulatus SB 1003]
Length = 398
Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats.
Identities = 105/451 (23%), Positives = 170/451 (37%), Gaps = 53/451 (11%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SI TN SAM A Q L+ IN NL Q +S+G V+ A DN+A W+I+++M+SD
Sbjct: 1 MSSINTNTSAMVALQTLKGINSNLAKTQSEISTGKTVASAKDNSAVWAISKVMESDVSGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+VS ++ G S V +A+ + D + TIK KI A + D+ + EI++L S +
Sbjct: 61 ESVSTSLATGQSMVSVARTAVESITDDLKTIKEKIVAAQDPSADTGKLDDEISELVSMIE 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
G+ FNG N + + + + + + T + +
Sbjct: 121 SKISGAQFNGVNLISSSGNETILGSLDRSGNTVSTNTINIARQDMSTTATTVATGAVAAG 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ T + + +S A T++ + + ++ D
Sbjct: 181 ANATNFVAAGTNKGASAIAAGAAEGFALSGMAAGETVTLAIGDRSFSYTVSQADVDSGSD 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ T+ + + +
Sbjct: 241 VNEVATANLFSQVMGAGMSGITATYDPAANAA---------------------------- 272
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
D ++ G +M + A
Sbjct: 273 -------------------------DLTINVDAANTLGVNMSVAINAAGSGPLAGLNGFT 307
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
V+ I++ I A AA G++ SRI Q F+ + DA++ G+G LVDADM S
Sbjct: 308 SSNTVAEIESMINGAIDAAAAFGAVESRIESQATFVSDLGDALKTGIGALVDADMEEASA 367
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQTQQQL +Q+LSI N ILSLF+
Sbjct: 368 RLQALQTQQQLGIQSLSIANQQPQSILSLFK 398
>gi|258626166|ref|ZP_05721014.1| flagellin FlaE [Vibrio mimicus VM603]
gi|258581521|gb|EEW06422.1| flagellin FlaE [Vibrio mimicus VM603]
Length = 378
Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats.
Identities = 44/357 (12%), Positives = 98/357 (27%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SA+ A + L + L +R+SSG R++ A D+AA I+ +++ LS
Sbjct: 4 TVNTNVSALVAQRHLNSASEMLSQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLSI 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S + A+ M + ++ +++ + ++Q E+ L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSSAERTALQEEMAALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L ++ I S + + +
Sbjct: 124 NRIAETTSFAGRKLLNGHFEKASFQIGASSGEAVQLSLRNMRSDSLDMGGFSYVAATMAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + T +
Sbjct: 184 KKWQVAKGKQQLNISYVNALGENENIQLQAKEGDDIEELATYINGQTDKVSASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + N + + + V T +
Sbjct: 244 QLYIAGKETAGTLSFSGSLANELQLNLLGYEAVDNLDISSVGGAQRAVSVIDTALKYVDG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D L + K+ D + + + +
Sbjct: 304 HRSELGALQNRFHHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTS 360
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/376 (12%), Positives = 106/376 (28%), Gaps = 11/376 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+A+ ++ A +++S ++ + + + +
Sbjct: 13 VAQRHLNSASEMLSQSLERL-----SSGNRINSAKDDAAGLQISNRLETQMRGLSIAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + + ++ + + +
Sbjct: 68 ANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSSAERTALQEEMAALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ AS I + S +++ + +A
Sbjct: 128 ETTSFAGRKLLNGHFEKASFQIGASSGEAVQLSLRNMRSDSLDMGGFSYVAATMADKKWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A S + + DI AT N T + + ++
Sbjct: 188 VAKGKQQLNISYVNALGENENIQLQAKEGDDIEELATYINGQTDKVSASVNEKGQLQLYI 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+T T S + L + + + VS IDT +K
Sbjct: 248 AGKETAGTLSFSGSLAN------ELQLNLLGYEAVDNLDISSVGGAQRAVSVIDTALKYV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
++G++ +R H + + + + R+ DAD A E+T++ Q QQ++
Sbjct: 302 DGHRSELGALQNRFHHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSV 361
Query: 436 LSIVNNSTARILSLFR 451
L+ +L L R
Sbjct: 362 LAQAKRQPKFVLFLLR 377
>gi|269836590|ref|YP_003318818.1| flagellin domain-containing protein [Sphaerobacter thermophilus DSM
20745]
gi|269785853|gb|ACZ37996.1| flagellin domain protein [Sphaerobacter thermophilus DSM 20745]
Length = 292
Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 93/273 (34%), Gaps = 3/273 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + L ++ +R+SSGLR++ AAD+AA SI++ M+ + L
Sbjct: 3 INTNTAALNAQRNLGMSALSMNKAIERLSSGLRINRAADDAAGLSISEKMRVEIRGLRQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQLR 120
G S V A+ +++ ++ + G ++++E+ QL ++
Sbjct: 63 VRNAQDGISLVQTAEGALNEVHGILQRMNELSLQGANGTLSQDDQVAVEAELKQLVEEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG T + S + +Q + + + +
Sbjct: 123 RIANTTGFNGIKLFNGGATGVTVELQIGSGTSAAEVLSINIQGISTADIGNTGGTVTSLN 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + ++ + + D V I + + N +
Sbjct: 183 AAVTALGTAISGGTGVEQAFRDVVDSVVQAVKDVSQIRSSLGAYQNRLEHTINNLNVAVE 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ A T ++ +
Sbjct: 243 NLSASESRIRDADMAEEVVAMTRAQILQQAGTA 275
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 41/93 (44%)
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
A ++V + +K + +G+ +R+ + + + + + R+ DADMA E
Sbjct: 200 QAFRDVVDSVVQAVKDVSQIRSSLGAYQNRLEHTINNLNVAVENLSASESRIRDADMAEE 259
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ Q QQ L+ N + +LSL R
Sbjct: 260 VVAMTRAQILQQAGTAVLAQANQAPQMVLSLLR 292
>gi|269961609|ref|ZP_06175971.1| Flagellin B [Vibrio harveyi 1DA3]
gi|269833650|gb|EEZ87747.1| Flagellin B [Vibrio harveyi 1DA3]
Length = 376
Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 85/221 (38%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 NVNTNVSAMTAQRYLNQAAEGQQKSMERLSSGYKINSAKDDAAGLQISNRLNAQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S +A+ M+++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVKNANDGISIAQVAEGAMNESTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + T+
Sbjct: 124 NRIAETTSFGGNKLLNGTYGTQSFQIGADSGEAVMLSMGNLRSDTSAMGGKSYAAEDGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
++ L ++ K + I+ D ++T
Sbjct: 184 ASWTVSDKTELKMSYTNKQGEEKELTINAKQGDDIEQLATY 224
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+E V+ ID +K + +G+ +R + + + + V R+ D D
Sbjct: 280 VTSVAGSQEAVAIIDGALKSVDSQRASLGAFQNRFNHAISNLDNINENVNASNSRIKDTD 339
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A E+T ++ Q QQ + L+ S + LSL
Sbjct: 340 YAKETTAMTKSQILQQASTSILAQAKQSPSAALSLL 375
>gi|304312776|ref|YP_003812374.1| Putative flagellin [gamma proteobacterium HdN1]
gi|301798509|emb|CBL46739.1| Putative flagellin [gamma proteobacterium HdN1]
Length = 552
Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 86/299 (28%), Gaps = 3/299 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L L R+SSGLR++ A D+AA +I+ + L+
Sbjct: 5 INTNVASINAQRNLNKSQGALATSLQRLSSGLRINSAKDDAAGLAISNRFTTQIRGLNVA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
G S + + + + I++ D KS+Q E+ QL S++
Sbjct: 65 VRNANDGISFAQTTEGALGETTTALQRIRDLAVQSANGTNSESDRKSLQEEVDQLVSEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++FNG L +T I + + + ++
Sbjct: 125 RIAETTTFNGTRVLNGSKDKTTFQIGANANQTISMSGVDARASSLGSQPGIVQSTGQRMD 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ G G G A +
Sbjct: 185 SMGDTGTGAQGLQEDDGSGTATQISDFKIRTANVDANDAVNIADVKFGGNISAANVSDIT 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A N + + V ASA G+ +
Sbjct: 245 DRFSANYGSGLAKSVAARINDIRKSGEATMQGVYASAVTTFRGSDVQSGDYAGTAPDAN 303
Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats.
Identities = 54/421 (12%), Positives = 102/421 (24%), Gaps = 5/421 (1%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS--SKVDIAKAGMSKAIDVMSTI 91
G RV + + + + I + A LGS V M D +
Sbjct: 134 GTRVLNGSKDKTTFQIGANANQTISMSGVDARASSLGSQPGIVQSTGQRMDSMGDTGTGA 193
Query: 92 KNKITAGVERGTDSKSIQSEITQLQSQLRDI-ARGSSFNGENWLRTDLGSSTASIAKSVI 150
+ S T + F G + A
Sbjct: 194 QGLQEDDGSGTATQISDFKIRTANVDANDAVNIADVKFGGNISAANVSDITDRFSANYGS 253
Query: 151 GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
G I +T D +
Sbjct: 254 GLAKSVAARINDIRKSGEATMQGVYASAVTTFRGSDVQSGDYAGTAPDANAATNIGAGEL 313
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
+ I+ + ++ A + + + + S +
Sbjct: 314 KNGDLKING--VDIGAVKFEANDSSGALTNAINAKSDVTGVQASVDRNGELVLTASDGRD 371
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
V S A T + + V T +
Sbjct: 372 IVVNTSDAITTNDLFGGGDEAATPRFDANFGDMRATGRLTVTGTDTLTFDGNADAALMGV 431
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
+ + S + + A ++ ID+ + + +G+I +R+
Sbjct: 432 DAAGLAAAGSEDNVQAMGTVRSADITSVDAANRTIASIDSALSQVDSFRATMGAIQNRME 491
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + +++ R++DAD A+E+ LS Q QQ + LS N + LSL
Sbjct: 492 STIRNLANVSESLSAANSRILDADFAAETANLSKNQVLQQAGISVLSQANALPQQALSLL 551
Query: 451 R 451
R
Sbjct: 552 R 552
>gi|30249562|ref|NP_841632.1| hag; flagellin [Nitrosomonas europaea ATCC 19718]
gi|30138925|emb|CAD85504.1| hag; flagellin [Nitrosomonas europaea ATCC 19718]
Length = 275
Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats.
Identities = 38/182 (20%), Positives = 76/182 (41%), Gaps = 3/182 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++++A + L +L R+SSGLR++ A D+AA +I++ M S ++
Sbjct: 4 VINTNIASLNAQRNLNVSQNSLSTALQRLSSGLRINSAKDDAAGLAISERMTSQIRGMNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S A+ + + + + I+ D +++Q E+TQL ++
Sbjct: 64 AARNANDGISLAQTAEGALVEIGNNLQRIRELAVQSANATNSEDDREALQKEVTQLIDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ + +SFNG L S + + + D V + + T +
Sbjct: 124 QRVGEQTSFNGTKLLDGSFASQIFQVGANEGETIDFTDIADVTASGLSVDSVDITGTDGT 183
Query: 180 ST 181
+
Sbjct: 184 AA 185
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 30/223 (13%), Positives = 71/223 (31%)
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
+ I + A A + + +V ++ + +
Sbjct: 53 RMTSQIRGMNQAARNANDGISLAQTAEGALVEIGNNLQRIRELAVQSANATNSEDDREAL 112
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR 348
+ T+ ++ ++ + + + + + ++
Sbjct: 113 QKEVTQLIDEIQRVGEQTSFNGTKLLDGSFASQIFQVGANEGETIDFTDIADVTASGLSV 172
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
+ + A +++ ID +K + +G+I +R ++ + +
Sbjct: 173 DSVDITGTDGTAAASVITTIDDALKIVNSTRADLGAIQNRFSSAIANLQTSAENLSASRS 232
Query: 409 RLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ DAD A+E+ L+ Q QQ V LS N +LSL R
Sbjct: 233 RIQDADFAAETAALTRAQILQQAGVAMLSQANALPNNVLSLLR 275
>gi|315654624|ref|ZP_07907530.1| flagellar protein [Mobiluncus curtisii ATCC 51333]
gi|315491088|gb|EFU80707.1| flagellar protein [Mobiluncus curtisii ATCC 51333]
Length = 318
Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 3/172 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI N AM++ + L NL +++SSG R++ AAD+++ +I++ ++S
Sbjct: 3 LSINQNIMAMNSYRNLSLTQSNLGKSLEKLSSGFRINRAADDSSGLAISEGLRSQVRGNK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQ 118
G S V A+ +++ D++ ++ I+ E+ QL+ +
Sbjct: 63 QAVKNAQDGISVVQTAEGALNEVHDMLQRMRELAVKGANDTNDAKARAFIEQEMGQLKME 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL 170
L + ++F+G L ++ +
Sbjct: 123 LVRVGASTNFDGRKLLWNGTKVEKDAVVTGSDFAIAETAGKTQADWWGKSGG 174
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 38/97 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + IDT I + GS+ +R + + + + + R+ D D
Sbjct: 222 VKDHKGYMAEIGKIDTAIHAVSKLRSDFGSVQNRFEHTINNLNVAVENLSASEARIRDTD 281
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MASE + + Q QQ L+ N +LSL R
Sbjct: 282 MASEMMQFTRGQILQQAGTSMLAQANQVPQTVLSLLR 318
>gi|88858114|ref|ZP_01132756.1| flagellar protein [Pseudoalteromonas tunicata D2]
gi|88819731|gb|EAR29544.1| flagellar protein [Pseudoalteromonas tunicata D2]
Length = 605
Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 69/159 (43%), Gaps = 3/159 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A+ + L L +++SSGLR++ A D+AA I+ + S +S
Sbjct: 3 IATNTTALYGQRSLSKATAGLNSAMEKLSSGLRINSAKDDAAGLQISNRLTSQINGMSVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ G S + +A+ + + + +++ D K+I E +L+ ++
Sbjct: 63 TRNANDGISMLQVAEGAQQEITNTLQRMRDLAVQAANATYSETDRKAINEEFIELKREIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
I+ +SF + + GS ++ + ++ + R
Sbjct: 123 RISDATSFGSKKLFQKASGSLVDTVERDMVKALQRTWLS 161
Score = 96.3 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 29/275 (10%), Positives = 73/275 (26%)
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+ + + L I + D + T + L+
Sbjct: 331 IGQNGLQSLMSELTTGQSFDASLNTASGAIWSNEADFFTDMMTTGEDPLDATKTRLQIFV 390
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
+ + A + G+ S + S + D + +
Sbjct: 391 ENKMDLTNLDNGALGGKDASDGEVRENTMQGTGSGRLDGSKGFQEFLVLDDNDNSRSDFD 450
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ ++ + V + + + + T + +
Sbjct: 451 TGATYDKPGGGQIRLQDYETQVHGAGGEYINLQVGARSQQVIGFTLGSFSTENLGLEYTE 510
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + ID + +G+ +R+ + + + + R+ D D A
Sbjct: 511 LVDQPQFAIFAIDDALTIVDKQRALMGASMNRLDKTINNLNNIIENASASRSRIRDTDFA 570
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ L+ +Q QQ A L+ N L+L +
Sbjct: 571 IQTAELTKMQITQQAATTLLAQANQLPQIALALLQ 605
>gi|297618062|ref|YP_003703221.1| flagellin domain protein [Syntrophothermus lipocalidus DSM 12680]
gi|297145899|gb|ADI02656.1| flagellin domain protein [Syntrophothermus lipocalidus DSM 12680]
Length = 688
Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N ++++ + L N +++SSGLR++ A D+AA +I++ M++ L
Sbjct: 3 INHNIASLNTYRMLTLNNTLTAKSLEKLSSGLRINRAGDDAAGLAISEKMRAQIRGLDMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S + A+ +++A ++ ++ D IQ E+ QL S+L
Sbjct: 63 VRNSQDGISMIQTAEGALNEAHSILQRMRELAVQAANDTNTDVDRAEIQKEMNQLTSELN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
I + FN + L +T
Sbjct: 123 RIGNTTEFNTKKLLDGGGSKATEGT 147
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 44/327 (13%), Positives = 97/327 (29%), Gaps = 1/327 (0%)
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ + ++ ++ S + + K+ ++ T + T
Sbjct: 361 QQAQSIATALANNTTVNTLYDVSYSGTKVILTEKANKISEIAVEKVSVSSTAVQGVMTYT 420
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+L K ++ + +D +V A+ + + TT A + +
Sbjct: 421 HTSQNMLTAGGKFTIDGVDILVVDDAVKYAAEITAGQAILYETTDTATTQMSKLKDAITN 480
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + T + SG +S + + + R GN NS S
Sbjct: 481 NTRLNGKYSVSHSSGTLTFTQVSGFESDTPVSMILWDRAGNGFEATFQVGANSAQSMTVQ 540
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
N + + + + + T N +
Sbjct: 541 INDMRSLALHVSGRTAGGDVVAGNGQIAKLTTTKVVTNGTTNEAVE-YALDVSSYDTATA 599
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+S I+ I+ +A K+G+ +R+ + + + + R+ D DMA E +
Sbjct: 600 AISVINDAIETVSAERSKLGAYQNRLEHTINNLGTSAENLTAAESRIRDVDMAKEMMEFT 659
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLF 450
+ Q A L+ N +L L
Sbjct: 660 KMNILTQAATAMLAQANQQPQSVLQLL 686
>gi|262404488|ref|ZP_06081043.1| flagellin B [Vibrio sp. RC586]
gi|262349520|gb|EEY98658.1| flagellin B [Vibrio sp. RC586]
Length = 376
Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 84/221 (38%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L ++ +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 NVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ G ++ ++IQ E++ L +L
Sbjct: 64 AVKNANDGISIAQTAEGAMNETTNILQRMRDLSLQSSNGSNSSSERRAIQEEVSALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G + I + + T +
Sbjct: 124 NRIAETTSFGGNKLLNGSFGHKSFQIGADSGEAVMLSMGSMRSDTQAMGGKSYRAQDGKA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ L N+ K I+ D ++T
Sbjct: 184 ADWRVGAATDLTLNYTDKQGEAREVTINAKQGDDLEELATY 224
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 45/385 (11%), Positives = 96/385 (24%), Gaps = 13/385 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++ A D M ++++G + + +
Sbjct: 4 NVNTNVSAM-TAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQIS-----NRLTSQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + ++ + + +
Sbjct: 58 SRGLDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLSLQSSNGSNSSSERRAIQEEVS 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ S S I + S +++
Sbjct: 118 ALNDELNRIAETTSFGGNKLLNGSFGHKSFQIGADSGEAVMLSMGSMRSDTQAMGGKSYR 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A A + K + G+ +
Sbjct: 178 AQDGKAADWRVGAATDLTLNYTDKQGEAREVTINAKQGDDLEELATYINGQTDDVKASVG 237
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
T+ D+G + + +E V
Sbjct: 238 EDGKMQLFASSQKVNGDVTIGGGLGGEIGFDAGRDVT-------VANIDVSTVAGSQEAV 290
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
S +D +K + +G+ +R + + + V R+ D D A E+T ++
Sbjct: 291 SVLDGALKAVDSQRASLGAFQNRFGHAISNLDNVNENVNASRSRIRDTDYARETTAMTKA 350
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q QQ + L+ S + LSL
Sbjct: 351 QILQQASTSVLAQAKQSPSAALSLL 375
>gi|84389709|ref|ZP_00991261.1| polar flagellin D [Vibrio splendidus 12B01]
gi|84376810|gb|EAP93684.1| polar flagellin D [Vibrio splendidus 12B01]
Length = 300
Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 71/184 (38%), Gaps = 3/184 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R++SG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLASGSKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSSNGSNSKSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + +T
Sbjct: 124 NRIAETTSFGGNKLLNGTHGTKSFQIGADNGEAVMLQLKDMRSDNAQMGGKSYQTENAKD 183
Query: 180 STDG 183
Sbjct: 184 KDWN 187
>gi|158321538|ref|YP_001514045.1| flagellin domain-containing protein [Alkaliphilus oremlandii
OhILAs]
gi|158141737|gb|ABW20049.1| flagellin domain protein [Alkaliphilus oremlandii OhILAs]
Length = 270
Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats.
Identities = 39/262 (14%), Positives = 83/262 (31%), Gaps = 3/262 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N AM+ ++L N +++SSG R++ A D+AA SI++ M++ L
Sbjct: 3 INNNLQAMNTHRQLGIANNGSAKSMEKLSSGYRINRAGDDAAGLSISEKMRAQIRGLDMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ + + ++ ++ D +I EI +L ++
Sbjct: 63 SKNAQDGISLIQTAEGALDEVHSILQRMRELSVQAANDTNVAVDRTAISDEIKELVKEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++FN + L L S I S L + +S
Sbjct: 123 RIAEKTTFNEKTLLDGTLTSVKFQIGADKGVSMTLKVGTMKSAALSVNALVVASHGSAAS 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + ++ ++ + + + +
Sbjct: 183 AIAKVDAAVKKVSAERSKLGANQNRLEHTIKNLDNASENIQAAESRIRDVDMAKEMMEQT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTT 262
+ + + A
Sbjct: 243 KQSILQQASTAMLAQANQAPQN 264
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 39/97 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ +D +K +A K+G+ +R+ + + ++ R+ D D
Sbjct: 174 VASHGSAASAIAKVDAAVKKVSAERSKLGANQNRLEHTIKNLDNASENIQAAESRIRDVD 233
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + QQ + L+ N + +L L R
Sbjct: 234 MAKEMMEQTKQSILQQASTAMLAQANQAPQNVLQLLR 270
>gi|301629268|ref|XP_002943766.1| PREDICTED: a-type flagellin-like [Xenopus (Silurana) tropicalis]
Length = 522
Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats.
Identities = 47/259 (18%), Positives = 90/259 (34%), Gaps = 3/259 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +I TN ++++A + L L + +R+SSGLR++ A D+AA +I++ S
Sbjct: 1 MATINTNVASLTAQRNLSTSQNALNISINRLSSGLRINSAKDDAAGLAISERFTSQIRGA 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ G S A+ + + D++ I+ +D ++ SE+ QL +
Sbjct: 61 NQAVRNANDGISLAQTAEGALKSSGDILQRIRELAVQSANATNSASDRDALNSEVNQLTA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L IA+ + FNG L S+ + + + + + + + +
Sbjct: 121 ELDRIAKTTEFNGRKLLDGSFTSAQFQVGANANQTITATSSNFSTSSYGNNRIGAKAAAS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+T V +V + TI K L A +
Sbjct: 181 GDATGDLTLDSTAGSKLVQAVSGVTSGQNTTAVGSGTLTIEGAAGKKDIAYTNGLSARDV 240
Query: 238 TFDQAKGIATIPVPLPAAP 256
V A
Sbjct: 241 AALVNAQTEYTGVSASART 259
Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats.
Identities = 42/334 (12%), Positives = 85/334 (25%)
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L A + + + ++ I + +
Sbjct: 189 LDSTAGSKLVQAVSGVTSGQNTTAVGSGTLTIEGAAGKKDIAYTNGLSARDVAALVNAQT 248
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
T + + + + + + G
Sbjct: 249 EYTGVSASARTEVQLDSFATGSSYSLGVASNNSKNAAITIAFDVGDNSAGGLSAAVKAFN 308
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
AK T + + + SG + S A ++ Y +D +++
Sbjct: 309 DISAKTGVTARINVDGKGVILSNDSGGNISLVNKSATTSQYTLHHANDTTTVMAGGLTMS 368
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
V T + STT S V + + +
Sbjct: 369 GAGSGATFVVISGQLTLDSSKSFSTTDTGGTASGTAGGFLLSGVNTSQMQAVKDMDVSTV 428
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+ +D I + G++ SR ++ + + R+ DAD A+E
Sbjct: 429 AGANRTLGIVDAAISAIASQRASYGALQSRFESAVANLQSTAENMSASRSRIQDADFAAE 488
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ LS Q QQ ++ N +L+L RG
Sbjct: 489 TASLSRAQILQQAGTAMVAQANQLPQGVLALLRG 522
>gi|17366561|sp|Q56571|FLAD_VIBAN RecName: Full=Flagellin D
gi|1272425|gb|AAB09434.1| flagellin D [Listonella anguillarum]
Length = 377
Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats.
Identities = 48/357 (13%), Positives = 105/357 (29%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNGASNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ D +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKADRVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + N + +
Sbjct: 124 NRIAETTSFGGNKLLNGTFETKSFQIGADNGEAVMLSLNNMRSDNAMMGGTSYQAANGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + T
Sbjct: 184 KDWSVQAGSNDLQITLKDTSGTDQTINISAKEGDDIEELATYINGQTDMVKASVDDEGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + P+ A +G T + + + + S
Sbjct: 244 QVFAGSNKVEGPVTFAGGLAGELGMQAGQAVTVDVIDVTSVGGAQESVAIVDAALQFVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D + + + K K+ D L ++ + + +
Sbjct: 304 HRAQLGAFQNRFSHAISNLDNINENVSASKSRIKDTDFAKETTALTKSQILSQASSS 360
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 36/362 (9%), Positives = 90/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNGASNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S D + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKADRVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + N + + S
Sbjct: 135 NKLLNGTFETKSFQIGADNGEAVMLSLNNMRSDNAMMGGTSYQAANGKDKDWSVQAGSND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
++ ++ + N + T G T+ A V + +
Sbjct: 195 LQITLKDTSGTDQTINISAKEGDDIEELATYINGQTDMVKASVDDEGKLQVFAGSNKVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + + +E V+ +D ++ + ++G+ +R
Sbjct: 255 PVTFAGGLAGELGMQAGQAVTVDVIDVTSVGGAQESVAIVDAALQFVDSHRAQLGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + V R+ D D A E+T L+ Q Q + L+ + LS
Sbjct: 315 FSHAISNLDNINENVSASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPQAALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|254239445|ref|ZP_04932767.1| flagellar hook-associated protein type 3 FlgL [Pseudomonas
aeruginosa 2192]
gi|126192823|gb|EAZ56886.1| flagellar hook-associated protein type 3 FlgL [Pseudomonas
aeruginosa 2192]
Length = 433
Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats.
Identities = 56/436 (12%), Positives = 122/436 (27%), Gaps = 21/436 (4%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + ++ + +L +++S+G R+ AD+ + + G
Sbjct: 3 ISTIQAFNNSVNGISRNYADLNRTFEQISTGKRILTPADDPVGSVRLLRLDQEQGLNEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ + + + + +V+ I+ + D KS+ SE+ Q + +L
Sbjct: 63 KTGMTEAKNSLSQEETILRSVGNVLQRIREIAGQAGDGALDSNDKKSLASELRQREDELL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++ +G+ GS + G + + DS
Sbjct: 123 NLLNSRDASGKYLFSGSQGSVQPFVRNEDGTYSY---MGDESQREVQIASSTRIPVSDSG 179
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
E R +F + A
Sbjct: 180 KVLFEDIVNAARLDTKAAAGNTGDARISVGLVEDELAFDSQFPASNPPAATDGFNIHFVS 239
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + P LP + + S A + + ++ + T
Sbjct: 240 DKEYVVYDPKSLPPGYDWTTYDPNSPPAWQLSKGAIDDDPKTIDKVLYAGVSVTIDGTPK 299
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G + K G+ + + L + + +G + + A
Sbjct: 300 AGDEFNVNYKPGSEKRSLLNVVSDLRKALESSTDNQAGNDAI---------------RDA 344
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ + GKIG+ + + E FI ++ + ++ D D A +
Sbjct: 345 TAVALTNLSAVAAAVDGGQGKIGARLNTVESTETFIDDVKLVNASVMSQIQDLDYAEALS 404
Query: 421 RLSALQTQQQLAVQAL 436
RLS T A Q+
Sbjct: 405 RLSLQSTIMDAAQQSY 420
>gi|22126348|ref|NP_669771.1| flagellin [Yersinia pestis KIM 10]
gi|51596049|ref|YP_070240.1| flagellin [Yersinia pseudotuberculosis IP 32953]
gi|108807214|ref|YP_651130.1| flagellin [Yersinia pestis Antiqua]
gi|108812442|ref|YP_648209.1| flagellin [Yersinia pestis Nepal516]
gi|145598572|ref|YP_001162648.1| flagellin [Yersinia pestis Pestoides F]
gi|149366212|ref|ZP_01888247.1| thermoregulated motility protein [Yersinia pestis CA88-4125]
gi|153950689|ref|YP_001401250.1| flagellin [Yersinia pseudotuberculosis IP 31758]
gi|165925882|ref|ZP_02221714.1| flagellin [Yersinia pestis biovar Orientalis str. F1991016]
gi|165938669|ref|ZP_02227224.1| flagellin [Yersinia pestis biovar Orientalis str. IP275]
gi|166010788|ref|ZP_02231686.1| flagellin [Yersinia pestis biovar Antiqua str. E1979001]
gi|166211003|ref|ZP_02237038.1| flagellin [Yersinia pestis biovar Antiqua str. B42003004]
gi|167401185|ref|ZP_02306688.1| flagellin [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167420335|ref|ZP_02312088.1| flagellin [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167425762|ref|ZP_02317515.1| flagellin [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|170024606|ref|YP_001721111.1| flagellin [Yersinia pseudotuberculosis YPIII]
gi|186895154|ref|YP_001872266.1| flagellin [Yersinia pseudotuberculosis PB1/+]
gi|218928961|ref|YP_002346836.1| flagellin [Yersinia pestis CO92]
gi|229897225|ref|ZP_04512381.1| thermoregulated motility protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229897952|ref|ZP_04513103.1| thermoregulated motility protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229902817|ref|ZP_04517934.1| thermoregulated motility protein [Yersinia pestis Nepal516]
gi|270486605|ref|ZP_06203679.1| bacterial flagellin N-terminal domain protein [Yersinia pestis KIM
D27]
gi|294503995|ref|YP_003568057.1| flagellin [Yersinia pestis Z176003]
gi|21959331|gb|AAM86022.1|AE013850_4 putative flagellin [Yersinia pestis KIM 10]
gi|51589331|emb|CAH20953.1| thermoregulated motility protein [Yersinia pseudotuberculosis IP
32953]
gi|108776090|gb|ABG18609.1| thermoregulated motility protein [Yersinia pestis Nepal516]
gi|108779127|gb|ABG13185.1| thermoregulated motility protein [Yersinia pestis Antiqua]
gi|115347572|emb|CAL20482.1| thermoregulated motility protein [Yersinia pestis CO92]
gi|145210268|gb|ABP39675.1| thermoregulated motility protein [Yersinia pestis Pestoides F]
gi|149292625|gb|EDM42699.1| thermoregulated motility protein [Yersinia pestis CA88-4125]
gi|152962184|gb|ABS49645.1| flagellin [Yersinia pseudotuberculosis IP 31758]
gi|165913283|gb|EDR31905.1| flagellin [Yersinia pestis biovar Orientalis str. IP275]
gi|165922086|gb|EDR39263.1| flagellin [Yersinia pestis biovar Orientalis str. F1991016]
gi|165990132|gb|EDR42433.1| flagellin [Yersinia pestis biovar Antiqua str. E1979001]
gi|166208183|gb|EDR52663.1| flagellin [Yersinia pestis biovar Antiqua str. B42003004]
gi|166962030|gb|EDR58051.1| flagellin [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167049574|gb|EDR60982.1| flagellin [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167055161|gb|EDR64958.1| flagellin [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|169751140|gb|ACA68658.1| flagellin domain protein [Yersinia pseudotuberculosis YPIII]
gi|186698180|gb|ACC88809.1| flagellin domain protein [Yersinia pseudotuberculosis PB1/+]
gi|229680264|gb|EEO76363.1| thermoregulated motility protein [Yersinia pestis Nepal516]
gi|229688993|gb|EEO81058.1| thermoregulated motility protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229693562|gb|EEO83611.1| thermoregulated motility protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|262361820|gb|ACY58541.1| flagellin [Yersinia pestis D106004]
gi|262366044|gb|ACY62601.1| flagellin [Yersinia pestis D182038]
gi|270335109|gb|EFA45886.1| bacterial flagellin N-terminal domain protein [Yersinia pestis KIM
D27]
gi|294354454|gb|ADE64795.1| flagellin [Yersinia pestis Z176003]
gi|320015419|gb|ADV98990.1| thermoregulated motility protein [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 369
Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 77/256 (30%), Gaps = 3/256 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQS 117
+ + G S + +++ + + ++ S SIQ EI+ +
Sbjct: 61 TQAARNANDGISIAQTTEGSLNEINNNLQRVRELTVQAQNGSNSSSDLDSIQDEISLRLA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ ++ + FNG+ L + S A I + + Y
Sbjct: 121 EIDRVSDQTQFNGKKVLAENTTMSIQVGANDGETIDINLQKIDSKSLGLGSYSVSGVSGA 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+S T G+ + K
Sbjct: 181 LTSLTDTSVTGVTTTTALDFSDISTFAKGATVHGIGDVGTDGAYADGYVIRTTDGKQYKG 240
Query: 238 TFDQAKGIATIPVPLP 253
D G T
Sbjct: 241 EVDATNGKVTFADDAN 256
Score = 113 bits (281), Expect = 8e-23, Method: Composition-based stats.
Identities = 43/357 (12%), Positives = 91/357 (25%)
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+ + S E ++ ++ T A++
Sbjct: 12 LTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGI 71
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ + I+ L L + +G+ LD D
Sbjct: 72 SIAQTTEGSLNEINNNLQRVRELTVQAQNGSNSSSDLDSIQDEISLRLAEIDRVSDQTQF 131
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+G + + + K + + + + + S +
Sbjct: 132 NGKKVLAENTTMSIQVGANDGETIDINLQKIDSKSLGLGSYSVSGVSGALTSLTDTSVTG 191
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ T + + + + T + I V T + + +
Sbjct: 192 VTTTTALDFSDISTFAKGATVHGIGDVGTDGAYADGYVIRTTDGKQYKGEVDATNGKVTF 251
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
D+ + A A + +D IK +G++ +R
Sbjct: 252 ADDANGDPIDDATKLEAAAQFSPAGKATASPLETLDDAIKQVDGLRSSLGAVQNRFESAV 311
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + R+ DAD A+E + +S Q QQ LS N +LSL
Sbjct: 312 TNLNNTVTNLTSARSRIEDADYATEVSNMSRAQILQQAGTSVLSQANQVPQTVLSLL 368
>gi|284041549|ref|YP_003391889.1| flagellin domain protein [Conexibacter woesei DSM 14684]
gi|283945770|gb|ADB48514.1| flagellin domain protein [Conexibacter woesei DSM 14684]
Length = 263
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 70/182 (38%), Gaps = 3/182 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A +A + L + L +R+SSG R++ AAD+AA +I++ ++ G L+
Sbjct: 5 INTNVEAFNAHRNLEGTSSKLAKSMERLSSGFRINRAADDAAGLAISEKLRGQIGGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQLR 120
+ G S V A+ +++ ++ ++ + +I SEI QL ++
Sbjct: 65 RRNVQDGISLVQTAEGSLTEVHSMLQRVRELAVQHATGTLAREDRGAIASEIAQLTQEVE 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I S FNG L + + + + + +
Sbjct: 125 RIGTTSQFNGITLLDGRNATVAFQVGANDGETISVATVSLQARVGRLDQTSTLAQIDTAI 184
Query: 181 TD 182
+
Sbjct: 185 AN 186
Score = 116 bits (289), Expect = 9e-24, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 51/143 (35%)
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+V TL ++ G + + A +L ++ I
Sbjct: 121 QEVERIGTTSQFNGITLLDGRNATVAFQVGANDGETISVATVSLQARVGRLDQTSTLAQI 180
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
DT I + A G++ +R+ + + + ++ + R+ D DMA+E +
Sbjct: 181 DTAIANVSDARAVFGAVQNRLEHTYNNLSVYQENLTASESRIRDVDMAAEMVNFTKNNIL 240
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ + +LSL R
Sbjct: 241 QQAGTSMLAQAQQAPQSVLSLLR 263
>gi|326886209|gb|AEA08751.1| flagellin D [Listonella anguillarum]
Length = 377
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 48/357 (13%), Positives = 105/357 (29%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNSASNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ D +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKADRVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + N + +
Sbjct: 124 NRIAETTSFGGNKLLNGTFETKSFQIGADNGEAVMLSLNNMRSDNAMMGGTSYQAANGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + T
Sbjct: 184 KDWSVQAGSNDLQITLKDTSGTDQTINISAKEGDDIEELATYINGQTDMVKASVDDEGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + P+ A +G T + + + + S
Sbjct: 244 QVFAGSNKVEGPVTFAGGLAGELGMQAGQAVTVDVIDVTSVGGAQESVAIVDAALQFVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D + + + K K+ D L ++ + + +
Sbjct: 304 HRAQLGAFQNRFSHAISNLDNINENVSASKSRIKDTDFAKETTALTKSQILSQASSS 360
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/362 (9%), Positives = 90/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNSASNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S D + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKADRVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + N + + S
Sbjct: 135 NKLLNGTFETKSFQIGADNGEAVMLSLNNMRSDNAMMGGTSYQAANGKDKDWSVQAGSND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
++ ++ + N + T G T+ A V + +
Sbjct: 195 LQITLKDTSGTDQTINISAKEGDDIEELATYINGQTDMVKASVDDEGKLQVFAGSNKVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + + +E V+ +D ++ + ++G+ +R
Sbjct: 255 PVTFAGGLAGELGMQAGQAVTVDVIDVTSVGGAQESVAIVDAALQFVDSHRAQLGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + V R+ D D A E+T L+ Q Q + L+ + LS
Sbjct: 315 FSHAISNLDNINENVSASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPQAALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|218710261|ref|YP_002417882.1| flagellin [Vibrio splendidus LGP32]
gi|218323280|emb|CAV19457.1| Bacterial flagellin N-terminus [Vibrio splendidus LGP32]
Length = 377
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 50/365 (13%), Positives = 112/365 (30%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SA+ A + L + N L +R++SG R++ A D+AA I+ +++ +
Sbjct: 4 TVNTNASALVAQRNLSNANNMLNQSLERLASGSRINSAKDDAAGLQISNRLEAQMSGIDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ ++M +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMNETTNIMQRMRDLSLQATNGSNGQSERTAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G+ L GSS+ I S + + S
Sbjct: 124 NRIAETTSFGGKKLLNGSFGSSSFQIGGSSGEAVQIGLKNMRTDDINMGGFSYVANGMAS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + Q + + T +
Sbjct: 184 DSWEVKSNQTDMTMAFTDRFGQPQEININAKAGDDIEELATYINGQTDLVSASVNDEGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + S ++G + T + + + T + S
Sbjct: 244 QIYMSGEDTAGTISFSGSLASELSMSAGYYESVDDINVTDVGGAQRAVSILDTAMKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + ++ L + K+ D + + +
Sbjct: 304 HRSELGAMQNRFDHAINNLENVHENLGASNSRIKDTDYAKETTQMLKQQILQQVSTTILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/364 (9%), Positives = 95/364 (26%)
Query: 87 VMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
V + + + + + S I + + + + +
Sbjct: 13 VAQRNLSNANNMLNQSLERLASGSRINSAKDDAAGLQISNRLEAQMSGIDVAVRNANDGI 72
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + + + + T + ++ T + +
Sbjct: 73 SIMQTAEGAMNETTNIMQRMRDLSLQATNGSNGQSERTAIQEEVTALNDELNRIAETTSF 132
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
S+ ++ A + +
Sbjct: 133 GGKKLLNGSFGSSSFQIGGSSGEAVQIGLKNMRTDDINMGGFSYVANGMASDSWEVKSNQ 192
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + N + + T G T+ A V + S
Sbjct: 193 TDMTMAFTDRFGQPQEININAKAGDDIEELATYINGQTDLVSASVNDEGQLQIYMSGEDT 252
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + ++ + + + VS +DT +K + ++G++
Sbjct: 253 AGTISFSGSLASELSMSAGYYESVDDINVTDVGGAQRAVSILDTAMKYVDSHRSELGAMQ 312
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + ++ + + + R+ D D A E+T++ Q QQ++ L+ +
Sbjct: 313 NRFDHAINNLENVHENLGASNSRIKDTDYAKETTQMLKQQILQQVSTTILAQAKQAPNLA 372
Query: 447 LSLF 450
L+L
Sbjct: 373 LTLL 376
>gi|30059872|gb|AAP13308.1| FliC [Escherichia coli]
Length = 502
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 58/502 (11%), Positives = 127/502 (25%), Gaps = 72/502 (14%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKS---------------------- 55
+L +R+SSGLR++ A D+AA +IA +
Sbjct: 1 NKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISVAQTT 60
Query: 56 ------------DNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTI---------KNK 94
LS + S ++ + +++ + + + K
Sbjct: 61 EGALSEINNNLQRIRELSVQATNGTNSDSDLNSIQDEITQRLSEIDRVSNQTQFNGVKVL 120
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLR-------------------DIARGSSFNGENWLR 135
+ + + I ++ S + +
Sbjct: 121 ASDQTMKIQVGANDGETIEIALDKIDAKTLGLDNFSVAPGKVPMSSAVALKSEAAPDLTK 180
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ + AK+ ++ D T T ++ + + + +
Sbjct: 181 VNATDGSVGGAKAFGSNYKNADVETYFGTGNVQDTKDTTDATGTAGTKVYQVQVEGQTYF 240
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + + + S + A F + G AT
Sbjct: 241 VGQDNNTNTNGFTLLKQNSTGYEKVQVGGKDVQLANFGGRVTAFVEDNGSATSVDLAAGK 300
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
+ S + V + + + A GNT
Sbjct: 301 MGKALAYNDAPMSVYFGGKNLDVHQVQDTQGNPVPNSFAAKTSDGTYIAVNVDAATGNTS 360
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE----------KLAMEEMV 365
D ++ + T + + LA +
Sbjct: 361 VITDPNGKAVEWAVKNDGSAQAIMREDDKVYTANITNKTATKGAELSASDLKALATTNPL 420
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
S +D + +G++ +R + + + R+ DAD A+E + +S
Sbjct: 421 SKLDEALAKVDKLRSSLGAVQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRA 480
Query: 426 QTQQQLAVQALSIVNNSTARIL 447
Q QQ L+ N +T +L
Sbjct: 481 QILQQAGTSVLAQANQTTQNVL 502
>gi|109627372|emb|CAJ77747.2| truncated flagellin [Escherichia coli]
Length = 266
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 60/154 (38%), Gaps = 3/154 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + I+ SIQ+EITQ ++
Sbjct: 64 ASRNANDGISVAQTTEGALNEINNNLQRIRELSVQATNGTNSDSDLSSIQAEITQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
++ + FNG L + A
Sbjct: 124 DRVSEQTQFNGVKVLAENNEMKIQVGANDGETIT 157
>gi|84388102|ref|ZP_00990998.1| flagellin [Vibrio splendidus 12B01]
gi|84377169|gb|EAP94039.1| flagellin [Vibrio splendidus 12B01]
Length = 376
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 82/221 (37%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 NVSTNVSAMTAQRYLNSAAEGTQKSMERLSSGYKINSAKDDAAGLQISNRLTSQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M+++ +++ +++ + +IQ E++ L ++L
Sbjct: 64 AVKNANDGISIAQTAEGAMNESTNILQRMRDLSLQSSNGSNSKSERVAIQEEVSALNTEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L GS + I + + N T
Sbjct: 124 NRIAETTSFGGNKLLNGTYGSQSFQIGADSGEAVMLTMNNMRTDTQDMGGKSYGVTEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
++ L + K I + ++T
Sbjct: 184 ASWRVAAGSDLTIKYNDKFGEAQELSISAKEGNDMEELATY 224
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 39/101 (38%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
N E VS ID +K + +G+ +R + + + V R
Sbjct: 275 VNDIDVTSVAGANEAVSIIDGALKSVDSNRASLGAFQNRFDHAISNLDNINENVNASKSR 334
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ D D A E+T ++ Q QQ + L+ S + LSL
Sbjct: 335 IKDTDYAKETTAMTKSQILQQASTSILAQAKQSPSAALSLL 375
>gi|262170869|ref|ZP_06038547.1| flagellin protein FlaF [Vibrio mimicus MB-451]
gi|261891945|gb|EEY37931.1| flagellin protein FlaF [Vibrio mimicus MB-451]
Length = 378
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 44/357 (12%), Positives = 97/357 (27%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SA+ A + L + L +R+SSG R++ A D+AA I+ +++ LS
Sbjct: 4 TVNTNVSALVAQRHLNSASEMLSQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLSI 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S + A+ M + ++ +++ + ++Q E+ L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSSAERTALQEEMAALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L ++ I S + + +
Sbjct: 124 NRIAETTSFAGRKLLNGHFEKASFQIGASSGEAVQLSLRNMRSDSLDMGGFSYVAAAMAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + T +
Sbjct: 184 KKWQVAKGKQQLNISYVNALGENENIQLQAKEGDDIEELATYINGQTDKVSASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + N + + V T +
Sbjct: 244 QIYIAGKETAGTLSFSGSLANELQLNLLGYEAVDNLDISSAGGAQRAVSVIDTALKYVDG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D L + K+ D + + + +
Sbjct: 304 HRSELGALQNRFHHAISNLDNVHENLATSNSRIKDADYAKETTQMIKQQILQQVSTS 360
Score = 100 bits (247), Expect = 7e-19, Method: Composition-based stats.
Identities = 47/376 (12%), Positives = 106/376 (28%), Gaps = 11/376 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+A+ ++ A +++S ++ + + + +
Sbjct: 13 VAQRHLNSASEMLSQSLERL-----SSGNRINSAKDDAAGLQISNRLETQMRGLSIAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + + ++ + + +
Sbjct: 68 ANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSSAERTALQEEMAALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ AS I + S +++ + +A
Sbjct: 128 ETTSFAGRKLLNGHFEKASFQIGASSGEAVQLSLRNMRSDSLDMGGFSYVAAAMADKKWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A S + + DI AT N T + + ++
Sbjct: 188 VAKGKQQLNISYVNALGENENIQLQAKEGDDIEELATYINGQTDKVSASVNEKGQLQIYI 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+T T S + L + + + VS IDT +K
Sbjct: 248 AGKETAGTLSFSGSLAN------ELQLNLLGYEAVDNLDISSAGGAQRAVSVIDTALKYV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
++G++ +R H + + + + R+ DAD A E+T++ Q QQ++
Sbjct: 302 DGHRSELGALQNRFHHAISNLDNVHENLATSNSRIKDADYAKETTQMIKQQILQQVSTSV 361
Query: 436 LSIVNNSTARILSLFR 451
L+ +L L R
Sbjct: 362 LAQAKRQPKFVLFLLR 377
>gi|78776373|ref|YP_392688.1| flagellin-like [Sulfurimonas denitrificans DSM 1251]
gi|78496913|gb|ABB43453.1| Flagellin-like protein [Sulfurimonas denitrificans DSM 1251]
Length = 392
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 59/448 (13%), Positives = 119/448 (26%), Gaps = 60/448 (13%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN SAM+A + + N L+ +SSGLR++ AAD+A+ +IA ++ L
Sbjct: 5 INTNISAMNAHRNAQQTNIGLDKSLGSLSSGLRITKAADDASGMAIADSLRQQAQGLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
G ++ + Q + I
Sbjct: 65 VSNANDGIG-----------ITQTADGALDEYINIANTIRTKAIQAASDGQTLDTRKAIQ 113
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ AS + + Y + + ++ S
Sbjct: 114 ADID------KLMAEAQNIASTTSFNGQTLLNGGYQNKSFHIGAYSGEAVKISIEDSRTE 167
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
L + + + T + +T A+++++ A+
Sbjct: 168 KIGKFALAESTTGLTATTGQAGVSTVSLSVTVTSADGTTSTSTGEAVLTSGAHSSYEIAQ 227
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ S + S +
Sbjct: 228 MVVDAFNSDAQTDGTNARASVYELTSSTA------------------------------- 256
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
S K E T +T + +T + E+
Sbjct: 257 ------------GTAAFGVRVDSSDKFTTTEAGFTIGDATAALTNNFSTIDVTTREKAEK 304
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ D +K + IGS+ +++ I + + V+ ++ D D A+ES +
Sbjct: 305 AIIISDYTLKDLDSRRSDIGSVQNQLESTIRNISVTQVNVQAAESQIRDVDFAAESANFA 364
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+S N ++ L +
Sbjct: 365 KFNILAQSGSYAMSQANAVQQNVMRLLQ 392
>gi|116328168|ref|YP_797888.1| endoflagellar hook-filament protein [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116330893|ref|YP_800611.1| endoflagellar hook-filament protein [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|116120912|gb|ABJ78955.1| Endoflagellar hook-filament protein [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116124582|gb|ABJ75853.1| Endoflagellar hook-filament protein [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 283
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 73/176 (41%), Gaps = 3/176 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ + L+ +N L+ +++S+GLR++ A D+A +++++ M++ L+
Sbjct: 3 INHNISALRTNNVLKSVNKELDKTMEKLSTGLRINRAGDDALGFAMSEKMRTQIRGLAQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ G S + + + + + +++ ++ D K +Q E+ QL ++
Sbjct: 63 ERNVMDGVSFIQVTEGTLEQVNNILQRLRELSIQTSNGIYSNEDRKLVQLEVDQLIEEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
I + + FN L D + + +G + + L
Sbjct: 123 RIGKSAEFNHIKPLSGDHSKQSNKPIQLQVGPNQNEKLDIFIDSMNATGLQLVANG 178
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 40/116 (34%)
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ L + + + + M+ +DT I +G+ +R+ +
Sbjct: 163 FIDSMNATGLQLVANGKKQVLSSPASANAMIGILDTAISKVNQQRADLGAYYNRLEITSQ 222
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
++ + R+ DADMA + + Q + L+ N +++ L
Sbjct: 223 GLQSSYVNMVAAESRVRDADMAEQIVDYTRNQILTKSGSAMLAQANMRPDQVVKLL 278
>gi|84389710|ref|ZP_00991262.1| flagellin [Vibrio splendidus 12B01]
gi|84376811|gb|EAP93685.1| flagellin [Vibrio splendidus 12B01]
Length = 377
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 50/365 (13%), Positives = 111/365 (30%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SA+ A + L + N L +R++SG R++ A D+AA I+ +++ +
Sbjct: 4 TVNTNVSALVAQRNLSNANNMLNQSLERLASGSRINSAKDDAAGLQISNRLEAQMSGIDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ ++M +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMNETTNIMQRMRDLSLQASNGSNSQSERTAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G+ L GSS+ I S + + S
Sbjct: 124 NRIAETTSFGGKKLLNGSFGSSSFQIGGSSGEAVQIGLKNMRTDDINMGGFSYVANGMAS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Q + + T +
Sbjct: 184 DSWEVTPDQNDMTMSFTDRFGQPQELTINAKEGDDIEELATYINSQTDLVSASVNDEGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + S ++G + T + + + T + S
Sbjct: 244 QIYMSGEDTAGTISFSGSLASELSMSAGYYESVDDINVTNVGGAQRAVSILDTAMKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + ++ L + K+ D + + +
Sbjct: 304 HRSELGAMQNRFDHAINNLENVHENLATSNSRIKDTDYAKETTQMLKQQILQQVSTTILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/364 (8%), Positives = 94/364 (25%)
Query: 87 VMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
V + + + + + S I + + + + +
Sbjct: 13 VAQRNLSNANNMLNQSLERLASGSRINSAKDDAAGLQISNRLEAQMSGIDVAVRNANDGI 72
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + + + + + +S ++ T + +
Sbjct: 73 SIMQTAEGAMNETTNIMQRMRDLSLQASNGSNSQSERTAIQEEVTALNDELNRIAETTSF 132
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
S+ ++ A + + +
Sbjct: 133 GGKKLLNGSFGSSSFQIGGSSGEAVQIGLKNMRTDDINMGGFSYVANGMASDSWEVTPDQ 192
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ S + + + T T+ A V + S
Sbjct: 193 NDMTMSFTDRFGQPQELTINAKEGDDIEELATYINSQTDLVSASVNDEGQLQIYMSGEDT 252
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + ++ + + VS +DT +K + ++G++
Sbjct: 253 AGTISFSGSLASELSMSAGYYESVDDINVTNVGGAQRAVSILDTAMKYVDSHRSELGAMQ 312
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + ++ + + + R+ D D A E+T++ Q QQ++ L+ +
Sbjct: 313 NRFDHAINNLENVHENLATSNSRIKDTDYAKETTQMLKQQILQQVSTTILAQAKQAPNLA 372
Query: 447 LSLF 450
L+L
Sbjct: 373 LTLL 376
>gi|89100625|ref|ZP_01173483.1| Hag protein [Bacillus sp. NRRL B-14911]
gi|89084649|gb|EAR63792.1| Hag protein [Bacillus sp. NRRL B-14911]
Length = 735
Score = 129 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ + +L++ L + +++SSGLR++ AAD++A +I++ M++ L
Sbjct: 3 INHNISALRSVNRLKNQEGKLALNMEKLSSGLRINTAADDSAGLAISEKMRAQIRGLEQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAID-VMSTIKNKITAGVERG---TDSKSIQSEITQLQSQL 119
+ G + +D A+ +S+ ++ + I+ + +D IQ EI +L+S +
Sbjct: 63 QRNVQDGLALLDTAEGALSQILNPPLQRIRELVIQAENDTLTKSDRMEIQKEIDELKSSI 122
Query: 120 RDIARGSSFNGENWLRTDL 138
DI++ + FNG+N +
Sbjct: 123 NDISQNTHFNGKNLIDGSF 141
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 39/97 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
E A ++ ID I ++ IG+ +R++ + ++ + + R+ DAD
Sbjct: 639 VLEANARSGALNIIDHAIGLISSERSLIGAYHNRLNYTVNNLETYSENLTGAESRIRDAD 698
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+A E + Q A L+ N +L L R
Sbjct: 699 LAKEMMAQTKNSILSQAAQAMLAQSNQIPQGVLQLLR 735
>gi|108809042|ref|YP_652958.1| putative flagellin [Yersinia pestis Antiqua]
gi|150260236|ref|ZP_01916964.1| lateral flagellin [Yersinia pestis CA88-4125]
gi|165924897|ref|ZP_02220729.1| lateral flagellin [Yersinia pestis biovar Orientalis str. F1991016]
gi|165939013|ref|ZP_02227565.1| lateral flagellin [Yersinia pestis biovar Orientalis str. IP275]
gi|166008773|ref|ZP_02229671.1| lateral flagellin [Yersinia pestis biovar Antiqua str. E1979001]
gi|166212100|ref|ZP_02238135.1| lateral flagellin [Yersinia pestis biovar Antiqua str. B42003004]
gi|167398904|ref|ZP_02304428.1| lateral flagellin [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167418802|ref|ZP_02310555.1| lateral flagellin [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167466323|ref|ZP_02331027.1| putative flagellin [Yersinia pestis FV-1]
gi|218927925|ref|YP_002345800.1| putative flagellin [Yersinia pestis CO92]
gi|229840636|ref|ZP_04460795.1| Flagellin protein flaA [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229842812|ref|ZP_04462964.1| Flagellin protein flaA [Yersinia pestis biovar Orientalis str.
India 195]
gi|294502801|ref|YP_003566863.1| putative flagellin [Yersinia pestis Z176003]
gi|108780955|gb|ABG15013.1| putative flagellin [Yersinia pestis Antiqua]
gi|115346536|emb|CAL19413.1| putative flagellin [Yersinia pestis CO92]
gi|149289644|gb|EDM39721.1| lateral flagellin [Yersinia pestis CA88-4125]
gi|165912969|gb|EDR31594.1| lateral flagellin [Yersinia pestis biovar Orientalis str. IP275]
gi|165923097|gb|EDR40248.1| lateral flagellin [Yersinia pestis biovar Orientalis str. F1991016]
gi|165992112|gb|EDR44413.1| lateral flagellin [Yersinia pestis biovar Antiqua str. E1979001]
gi|166206846|gb|EDR51326.1| lateral flagellin [Yersinia pestis biovar Antiqua str. B42003004]
gi|166962796|gb|EDR58817.1| lateral flagellin [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051408|gb|EDR62816.1| lateral flagellin [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|229690079|gb|EEO82136.1| Flagellin protein flaA [Yersinia pestis biovar Orientalis str.
India 195]
gi|229697002|gb|EEO87049.1| Flagellin protein flaA [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|262360833|gb|ACY57554.1| putative flagellin [Yersinia pestis D106004]
gi|262364778|gb|ACY61335.1| putative flagellin [Yersinia pestis D182038]
gi|294353260|gb|ADE63601.1| putative flagellin [Yersinia pestis Z176003]
Length = 401
Score = 129 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 62/451 (13%), Positives = 128/451 (28%), Gaps = 52/451 (11%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN SA +A L + R+S+G R++ ADNAA I M+ +
Sbjct: 3 LSIHTNASAKTAINSLSNAGLANAKSSQRLSTGFRINSPADNAAGLQITNRMEKFLNSAG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
I + + IA G+++++ ++ +K T + + ++ +Q + +
Sbjct: 63 QAKQNIQESIAMLQIADGGLAESVKTLNAMKKLATQ----AANDTNSAADREAIQKEFSE 118
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ + T+ S + + +G +++ L+ L S
Sbjct: 119 LGKELQ---NALNNTEYNSEKLFADGGKMRKELNFQSGTDAESSLKLDLNSVIAELTESV 175
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ + D+D +V D ++ + T + + N +
Sbjct: 176 TKQAPKITGKSSSATGSLEKQAYDLDKAVTDTKSLVAGAEGVQKTLEHDFAASGNKAVAE 235
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
K P S + + A D
Sbjct: 236 IKIPEYKDALGKTVPEVVIALGAVITSANSNQMKDAVAALKTTHD--------------- 280
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ +K
Sbjct: 281 ------------------------------AAVKAEATFQAKNSTGGGVMNMQLADKDLA 310
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ + I A +G+ +R+ + + M + +G + D D A E
Sbjct: 311 MKADKKLSDVIDAYGAFRATLGANQNRLQSSSNNLDNMISNTAQALGSIKDTDFADEMKN 370
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + Q +V L N +T I +L +G
Sbjct: 371 HAQSEMLMQSSVMMLKKANAATQLISTLLQG 401
>gi|284045754|ref|YP_003396094.1| flagellin domain protein [Conexibacter woesei DSM 14684]
gi|283949975|gb|ADB52719.1| flagellin domain protein [Conexibacter woesei DSM 14684]
Length = 262
Score = 129 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A +A + L + L +R+SSG R++ AAD+AA +I++ ++ G L+
Sbjct: 5 INTNVEAFNAHRNLESTSGKLAKSMERLSSGFRINRAADDAAGLAISEKLRGQIGGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ G S V + +++ ++ ++ D +I SEI QL +++
Sbjct: 65 RRNVQDGISLVQTTEGALTEVHSMLQRVRELKVQHENGTLAANDRGAIASEIAQLAAEIG 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
I + FNG L + + ++ A
Sbjct: 125 RIGTTAQFNGIRLLDSAVAATFQVGAN 151
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 40/89 (44%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
++ IDT I+ + A G++ +R+ + + + ++ + R+ D DMA+E
Sbjct: 174 ATLAVIDTGIENVSRARASFGAVQNRLEHTYNNLSVYQENLSASESRIRDVDMAAEMVTF 233
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ QQ L+ + +LSL R
Sbjct: 234 TKNNILQQAGTSMLAQAQQAPQSVLSLLR 262
>gi|260892173|ref|YP_003238270.1| flagellin domain protein [Ammonifex degensii KC4]
gi|260864314|gb|ACX51420.1| flagellin domain protein [Ammonifex degensii KC4]
Length = 272
Score = 129 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 44/262 (16%), Positives = 97/262 (37%), Gaps = 3/262 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++A + L + L +++SSGLR++ A D+AA +I++ ++S L+
Sbjct: 5 INHNLEALNAWRNLNQTSSLLAKSMEKLSSGLRINRAGDDAAGLAISEKLRSQVRGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ D ++IQ+EI QL +++
Sbjct: 65 IRNAQDGISLIQTAEGALNETHAILQRLRELAVQASNDTLTQQDRQAIQAEINQLVAEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + L + I + + LD T L ++
Sbjct: 125 RIATTTEFNTQKLLDGTFLNKWFQIGANTGQGIQISISAANSAALQVNALDVSTSLAANN 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ G+ + V ++ ++ + S + + + F
Sbjct: 185 AIASIDAGISIVSMMRANLGAVQNRLEHTIANLSVAAENLQASESRIRDVDMAQEMMNFT 244
Query: 241 QAKGIATIPVPLPAAPAAPNTT 262
+ + + V + A
Sbjct: 245 RLQILQQAGVAVLAQANMAPQA 266
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 46/133 (34%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
T + + N + LA ++ ID I +
Sbjct: 140 GTFLNKWFQIGANTGQGIQISISAANSAALQVNALDVSTSLAANNAIASIDAGISIVSMM 199
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+G++ +R+ + + + ++ R+ D DMA E + LQ QQ V L+
Sbjct: 200 RANLGAVQNRLEHTIANLSVAAENLQASESRIRDVDMAQEMMNFTRLQILQQAGVAVLAQ 259
Query: 439 VNNSTARILSLFR 451
N + +L L R
Sbjct: 260 ANMAPQAVLQLLR 272
>gi|256750560|gb|ACV21065.1| flagellin A [Vibrio parahaemolyticus]
Length = 376
Score = 129 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 83/221 (37%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 NVNTNVSAMTAQRYLNHAAEGQQKSMERLSSGYKINSAKDDAAGLQISNRLNAQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S +A+ M+++ +++ +++ + +IQ E+T L L
Sbjct: 64 AVKNANDGISIAQVAEGAMNESTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDGL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + T+
Sbjct: 124 NRIAETTSFGGNKLLNGTYGTQSFQIGADSGEAVMLSMGSLRSDTSAMGGKSYSAEEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
++ L ++ K + I D ++T
Sbjct: 184 ASWTVGDKTELKMSYTNKQGEEKELTIKAKQGDDIEQLATY 224
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 58/192 (30%)
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
+ T G S + + T G + A VG
Sbjct: 184 ASWTVGDKTELKMSYTNKQGEEKELTIKAKQGDDIEQLATYINGQSEDVKASVGEDGKLQ 243
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
ST + + +G +E V+ ID +K +
Sbjct: 244 VFASTQKVNGEVEFSGNLAGEIGFGDAKDVTVKDIDVTTVAGSQEAVAVIDGALKSVDSQ 303
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+G+ +R + + + + V R+ D D A E+T ++ Q QQ + L+
Sbjct: 304 RASLGAFQNRFNHAISNLDNINENVNASNSRIKDTDYAKETTAMTKSQILQQASTSILAQ 363
Query: 439 VNNSTARILSLF 450
S + LSL
Sbjct: 364 AKQSPSAALSLL 375
>gi|323496565|ref|ZP_08101619.1| flagellin [Vibrio sinaloensis DSM 21326]
gi|323318409|gb|EGA71366.1| flagellin [Vibrio sinaloensis DSM 21326]
Length = 377
Score = 129 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 45/357 (12%), Positives = 105/357 (29%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L ++ +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 NVNTNVSAMTAQRHLNGAAEGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
G S A+ M+++ +++ +++ +IQ E+T L +L
Sbjct: 64 AVKNANDGISIAQTAEGAMNESTNILQRMRDLALQSSNGSNSRSERIAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L GS + I S + T
Sbjct: 124 NRIAETTSFGGNKLLNGTYGSQSFQIGASSGEAVQLSMGNMRSDTAEMGGKAYVAEEGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ V + + + + +
Sbjct: 184 ASWTVSAGSTDLTLGYTDVHGEEKELTINAKVGDDIEQVATYINGQSDDVKASVGEDGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + T + + + ++ S
Sbjct: 244 QLFAASNKVATDVDIGGGLGGEIGFGDAQSKTVADVDVTSVAGSQMAVSIIDGALKNVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + G+ +D + +++ + + D + ++ + +
Sbjct: 304 QRADLGAFQNRFGHAINNLDNINENVNASRSRILDTDFAKETTAMTKSQILQQASTS 360
Score = 104 bits (258), Expect = 4e-20, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 42/105 (40%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
++ + VS ID +K + +G+ +R + + + + V
Sbjct: 272 QSKTVADVDVTSVAGSQMAVSIIDGALKNVDSQRADLGAFQNRFGHAINNLDNINENVNA 331
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R++D D A E+T ++ Q QQ + L+ S + LSL
Sbjct: 332 SRSRILDTDFAKETTAMTKSQILQQASTSILAQAKQSPSSALSLL 376
>gi|289208575|ref|YP_003460641.1| flagellin domain protein [Thioalkalivibrio sp. K90mix]
gi|288944206|gb|ADC71905.1| flagellin domain protein [Thioalkalivibrio sp. K90mix]
Length = 375
Score = 129 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 3/148 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN +++A + LR L+ R++SG R++ A D+AA +I++ + L+
Sbjct: 5 LSVATNLLSLNAQRHLRQSQAALQTAFQRLASGQRINSARDDAAGLAISERFTTQIRGLN 64
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G S A+ + + I+ +D +I E+ QL ++
Sbjct: 65 QAMRNAQDGISLAQTAEGALGSMTGNLQRIRQLAVQAANATLSASDRGAIDREVRQLLAE 124
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIA 146
IA ++FNG + L +G++ I
Sbjct: 125 NDRIATQTTFNGRSLLDGSMGTAFFQIG 152
Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats.
Identities = 40/379 (10%), Positives = 84/379 (22%), Gaps = 4/379 (1%)
Query: 73 KVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ + + A ++ + I + +A F +
Sbjct: 1 MAQVLSVATNLLSLNAQRHLRQSQAALQTAFQRLASGQRINSARDDAAGLAISERFTTQI 60
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ + + + I S++D + +
Sbjct: 61 RGLNQAMRNAQDGISLAQTAEGALGSMTGNLQRIRQLAVQAANATLSASDRGAIDREVRQ 120
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + + + +
Sbjct: 121 LLAENDRIATQTTFNGRSLLDGSMGTA----FFQIGPNAGQTLAIDLGDSMRNRFVGAIA 176
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A + + R T +T+ + +
Sbjct: 177 SAYSGELEAAFASDPLEVDQDFFIRVGERDPVEIPAGHYRTPQELTAAIDRALGSTGRAV 236
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
T ID+ T N + + +S +D +
Sbjct: 237 LTDDGRLNLIARETLTISGETAIDTLGLPATTETGGSLNDVDLTTRQGASDALSRLDAAL 296
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A + G+I +R + + D + R++DAD A+E TRL Q QQ
Sbjct: 297 DAVNARRSQFGAIQNRFESTITNLGITSDNLAAARSRILDADYAAEVTRLVRAQILQQAG 356
Query: 433 VQALSIVNNSTARILSLFR 451
V L N L L +
Sbjct: 357 VAVLVQANALPQTFLRLLQ 375
>gi|260772314|ref|ZP_05881230.1| flagellin protein FlaD [Vibrio metschnikovii CIP 69.14]
gi|260611453|gb|EEX36656.1| flagellin protein FlaD [Vibrio metschnikovii CIP 69.14]
Length = 377
Score = 129 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 42/327 (12%), Positives = 88/327 (26%), Gaps = 3/327 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +AM+A + L + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVAAMTAQRYLNSATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M + +++ I++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISMAQTAEGAMQETTNILQRIRDLSLQSANGSNSKSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + I + + + N
Sbjct: 124 NRIAETTSFGGNRLLNGTFQTKAFQIGSNSGEAVMLTLNDMRSDNVKMGGTSYVAATEAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
V + T
Sbjct: 184 KDWTVSDGNNELTLTLNDVNGVEQTINISAKVGDDIEELATYINGQTDMVQASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + A + T + + + + S
Sbjct: 244 QIFSGEHKVTGDVTFGGALATELAMGPAQAVTVNTIDVTSVGGAQESVAIVDAALQYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + +D + ++
Sbjct: 304 HRAELGAFQNRFNHAINNLDNINENVN 330
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 39/362 (10%), Positives = 92/362 (25%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N T + + S +I + + + N ++ +
Sbjct: 15 QRYLNSATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISM 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + I +S ++ + +
Sbjct: 75 AQTAEGAMQETTNILQRIRDLSLQSANGSNSKSERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + + + A + N + T S +
Sbjct: 135 NRLLNGTFQTKAFQIGSNSGEAVMLTLNDMRSDNVKMGGTSYVAATEADKDWTVSDGNNE 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + N V + T G T+ A V +
Sbjct: 195 LTLTLNDVNGVEQTINISAKVGDDIEELATYINGQTDMVQASVNEKGQLQIFSGEHKVTG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ + NT +E V+ +D ++ + ++G+ +R
Sbjct: 255 DVTFGGALATELAMGPAQAVTVNTIDVTSVGGAQESVAIVDAALQYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + + V R+ D D A E+T L+ Q Q + L+ + LS
Sbjct: 315 FNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILGQASSSILAQAKQAPNAALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|302390128|ref|YP_003825949.1| flagellin domain protein [Thermosediminibacter oceani DSM 16646]
gi|302200756|gb|ADL08326.1| flagellin domain protein [Thermosediminibacter oceani DSM 16646]
Length = 270
Score = 129 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 38/262 (14%), Positives = 93/262 (35%), Gaps = 3/262 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A ++L N +++ +++SSG R++ A D+AA +I++ M++ L+
Sbjct: 3 INHNISALNAYRQLTINNTSMQKSLEKLSSGYRINRAGDDAAGLAISEKMRAQIRGLNMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ D K++Q E+ QL +++
Sbjct: 63 VKNAQDGISLIQTAEGALTETHAILQRMRELAVQAANDTNTVDDRKALQEEVNQLIAEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + L I ++ S + ++
Sbjct: 123 RIADNTEFNTQKLLDASFTGKVFHIGANIGQSITIGIADMDAAALGVDAVAITNQTGANT 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + + + ++ ++ + S + + F
Sbjct: 183 AISTIDAAIKTVSDERAKLGAYQNRLEHTINNLSVATENLTAAESRIRDVDMAKEMMEFT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTT 262
+ + + A +
Sbjct: 243 RQSILNQAATAMLAQANMLPQS 264
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 43/132 (32%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ + + + + + A + +S ID IK +
Sbjct: 138 ASFTGKVFHIGANIGQSITIGIADMDAAALGVDAVAITNQTGANTAISTIDAAIKTVSDE 197
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + + + + R+ D DMA E + Q A L+
Sbjct: 198 RAKLGAYQNRLEHTINNLSVATENLTAAESRIRDVDMAKEMMEFTRQSILNQAATAMLAQ 257
Query: 439 VNNSTARILSLF 450
N +L L
Sbjct: 258 ANMLPQSVLKLL 269
>gi|258621093|ref|ZP_05716127.1| flagellin FlaE [Vibrio mimicus VM573]
gi|258586481|gb|EEW11196.1| flagellin FlaE [Vibrio mimicus VM573]
Length = 378
Score = 129 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 44/357 (12%), Positives = 97/357 (27%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SA+ A + L + L +R+SSG R++ A D+AA I+ +++ LS
Sbjct: 4 TVNTNVSALVAQRHLNSASEMLSQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLSI 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S + A+ M + ++ +++ + ++Q E+ L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSSAERTALQEEMAALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L ++ I S + + +
Sbjct: 124 NRIAETTSFAGRKLLNGHFEKASFQIGASSGEAVQLSLRNMRSDSLDMGGFSYVAAAMAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + T +
Sbjct: 184 KKWQVAKGKQQLNISYVNALGENENIQLQAKEGDDIEELATYINGQTDKVSASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + N + + V T +
Sbjct: 244 QLYIAGKETSGTLSFSGSLANELQLNLLGYEAVDNLDISSAGGAQRAVSVIDTALKYVDG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D L + K+ D + + + +
Sbjct: 304 HRSELGALQNRFHHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTS 360
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/376 (12%), Positives = 106/376 (28%), Gaps = 11/376 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+A+ ++ A +++S ++ + + + +
Sbjct: 13 VAQRHLNSASEMLSQSLERL-----SSGNRINSAKDDAAGLQISNRLETQMRGLSIAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + + ++ + + +
Sbjct: 68 ANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSSAERTALQEEMAALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ AS I + S +++ + +A
Sbjct: 128 ETTSFAGRKLLNGHFEKASFQIGASSGEAVQLSLRNMRSDSLDMGGFSYVAAAMADKKWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A S + + DI AT N T + + ++
Sbjct: 188 VAKGKQQLNISYVNALGENENIQLQAKEGDDIEELATYINGQTDKVSASVNEKGQLQLYI 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+T T S + L + + + VS IDT +K
Sbjct: 248 AGKETSGTLSFSGSLAN------ELQLNLLGYEAVDNLDISSAGGAQRAVSVIDTALKYV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
++G++ +R H + + + + R+ DAD A E+T++ Q QQ++
Sbjct: 302 DGHRSELGALQNRFHHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSV 361
Query: 436 LSIVNNSTARILSLFR 451
L+ +L L R
Sbjct: 362 LAQAKRQPKFVLFLLR 377
>gi|261209879|ref|ZP_05924180.1| flagellin protein FlaD [Vibrio sp. RC341]
gi|260841065|gb|EEX67590.1| flagellin protein FlaD [Vibrio sp. RC341]
Length = 377
Score = 129 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 46/365 (12%), Positives = 108/365 (29%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +AM+A + L + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ D +IQ EIT L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A +SF G L + + I + + +
Sbjct: 124 NRVAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVATESKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ Q + T
Sbjct: 184 KDWKVAAGANDITFTLKDIDGQDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + + +G+ T + + V + + S
Sbjct: 244 QIFAGNNKVTGDVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDSALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D L ++ + + +
Sbjct: 304 HRAELGAFQNRFSHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/362 (9%), Positives = 89/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
T + + S +I + + + N ++ +
Sbjct: 15 QRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S D + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALNDELNRVAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + + + + +
Sbjct: 135 NKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVATESKDKDWKVAAGAND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + + T G T+ A V +
Sbjct: 195 ITFTLKDIDGQDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEKGQLQIFAGNNKVTG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T ++ V+ ID+ +K + ++G+ +R
Sbjct: 255 DVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDSALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + V R+ D D A E+T L+ Q Q + L+ + LS
Sbjct: 315 FSHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPNAALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|194365671|ref|YP_002028281.1| flagellin [Stenotrophomonas maltophilia R551-3]
gi|194348475|gb|ACF51598.1| flagellin domain protein [Stenotrophomonas maltophilia R551-3]
Length = 395
Score = 129 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 51/380 (13%), Positives = 103/380 (27%), Gaps = 3/380 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L +L R+SSG R++ A D+AA +I++ +
Sbjct: 4 VINTNTMSLNAQRNLSTSGSSLATTIQRLSSGSRINSAKDDAAGLAISERFGTQIRGTDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S +A+ +++ + + ++ +D K++Q+E+TQL S++
Sbjct: 64 AIRNANDGISLAQVAEGSLTEIGNNLQRVRELSVQASNATNSASDRKALQAEVTQLVSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A+ S FNG L S + + + D + + L +
Sbjct: 124 DRVAKQSDFNGTKLLDGSFSSQLFQVGANAGQAIAIDKTIDAKANALGGAKFDTNALALA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + +
Sbjct: 184 DPAANGDFKTTGMSINGVAIAGIDVKQGADATATGKASREALVTAINAKIGETGVYAEVN 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A T A + + T G+ + AA + S
Sbjct: 244 GTAGVTLTSVKDSVNADGSFKAITATPGTWTGGAAAPTFTASTAAPAAKYASDLDVSTVK 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
V K + + +R S + ++
Sbjct: 304 GAQQAMEIVDKALGAINSTRADLGAIQNRFTSVVANLQTSSENLSASRSRIKDTDFAKET 363
Query: 360 AMEEMVSFIDTQIKCATAAA 379
A + A A
Sbjct: 364 AELTRTQILQQAGTAMLAQA 383
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 45/138 (32%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T + + ++A+ + ++ + +D +
Sbjct: 258 NADGSFKAITATPGTWTGGAAAPTFTASTAAPAAKYASDLDVSTVKGAQQAMEIVDKALG 317
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+I +R ++ + + R+ D D A E+ L+ Q QQ
Sbjct: 318 AINSTRADLGAIQNRFTSVVANLQTSSENLSASRSRIKDTDFAKETAELTRTQILQQAGT 377
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 378 AMLAQANQVPQGVLSLLR 395
>gi|54308105|ref|YP_129125.1| flagellin [Photobacterium profundum SS9]
gi|46912531|emb|CAG19323.1| putative flagellin A [Photobacterium profundum SS9]
Length = 382
Score = 129 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 49/368 (13%), Positives = 104/368 (28%), Gaps = 3/368 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +L +R+S+G +++ A D+AA I+ + + L+
Sbjct: 4 TVNTNVSAMTAQRYLNKASNDLSQSMERLSTGSKINSAKDDAAGLQISNRLVAQTRGLNV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ + ++ ++ +++ D ++IQ E+ LQ +L
Sbjct: 64 AIRNANDGISIAQTAEGALQESTSILQRMRDLSLQSANGANSNEDREAIQQEVGALQDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G + I + I + +
Sbjct: 124 NRIAETTSFGGRKLLNGQFGEAAFQIGADSGEAIIMGLTSVRADDSRMGGQMFRANGMTD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + N +P + I+ + T + + S
Sbjct: 184 ANWQAGAGDKISINVAGLADPISVDLIEGDDIEEVATRINGQQSGVSASVRDNGELQLFS 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D A + + S S A + I++ + A
Sbjct: 244 DNGAITLDSANTQLAQGKDASGAPVDLFAGSTSEAVTVQQIKVTSVGGAQEAVGTIDSAL 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + T +
Sbjct: 304 KYIDSQRADLGAKQNRLGHTINNLANTAENVSTSNSRIRDTDFAKESTEMTKNQILQQAS 363
Query: 360 AMEEMVSF 367
+
Sbjct: 364 TSILAQAK 371
Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats.
Identities = 43/376 (11%), Positives = 102/376 (27%), Gaps = 6/376 (1%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
A+ ++KA + +S ++ + + + +
Sbjct: 13 TAQRYLNKASNDLSQSMERL-----STGSKINSAKDDAAGLQISNRLVAQTRGLNVAIRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A A+ + ++ ++
Sbjct: 68 ANDGISIAQTAEGALQESTSILQRMRDLSLQSANGANSNEDREAIQQEVGALQDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ +A+ I + ++A ++ A
Sbjct: 128 ETTSFGGRKLLNGQFGEAAFQIGADSGEAIIMGLTSVRADDSRMGGQMFRANGMTDANWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A + S + ++ ++ +++ N
Sbjct: 188 AGAGDKISINVAGLADPISVDLIEGDDIEEVATRINGQQSGVSASVRDNGELQLFSDNGA 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+D+ +T L KD ++ T +E V ID+ +K
Sbjct: 248 ITLDSANTQLAQGKDASGAPVDLFAGSTSEAVT-VQQIKVTSVGGAQEAVGTIDSALKYI 306
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ +G+ +R+ + + + V R+ D D A EST ++ Q QQ +
Sbjct: 307 DSQRADLGAKQNRLGHTINNLANTAENVSTSNSRIRDTDFAKESTEMTKNQILQQASTSI 366
Query: 436 LSIVNNSTARILSLFR 451
L+ L+L +
Sbjct: 367 LAQAKQIPQAALTLLQ 382
>gi|90411013|ref|ZP_01219027.1| flagellin [Photobacterium profundum 3TCK]
gi|90328226|gb|EAS44537.1| flagellin [Photobacterium profundum 3TCK]
Length = 382
Score = 129 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 49/368 (13%), Positives = 101/368 (27%), Gaps = 3/368 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +L +R+S+G +++ A D+AA I+ + + L+
Sbjct: 4 TVNTNVSAMTAQRYLNKASGDLSQSMERLSTGSKINSAKDDAAGLQISNRLVAQTRGLNV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQL 119
G S A+ + ++ ++ +++ D +IQ E+ LQ +L
Sbjct: 64 AMRNANDGISIAQTAEGALQESTSILQRMRDLSLQSSNGANSDDDRVAIQQEVGALQDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G + I + I + +
Sbjct: 124 NRIAETTSFGGRKLLNGQFGEAAFQIGADSGEAIIMGLTSVRADDSRMGGQMFRATGMAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ N +P + I+ + T + + S
Sbjct: 184 ENWQAGAGDKISINVAGLADPISVDLIEGDDIEEVATRINGQQSGVSASVRDNGELQLFS 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A + S S A + + + + A
Sbjct: 244 ENGAVTLDSTNTQLAQGKDAAGAPVDLFAGSASEAMTVQQVDVKSVGGAQEAVGTIDSAL 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + S + T A +
Sbjct: 304 KYIDSQRADLGAKQNRLGHTINNLANVSENVSASNSRIRDTDFAKESTEMAKNQILQQAS 363
Query: 360 AMEEMVSF 367
+
Sbjct: 364 TSILAQAK 371
Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats.
Identities = 41/376 (10%), Positives = 99/376 (26%), Gaps = 6/376 (1%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
A+ ++KA +S ++ + + + +
Sbjct: 13 TAQRYLNKASGDLSQSMERL-----STGSKINSAKDDAAGLQISNRLVAQTRGLNVAMRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A A+ + ++ +
Sbjct: 68 ANDGISIAQTAEGALQESTSILQRMRDLSLQSSNGANSDDDRVAIQQEVGALQDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ +A+ I + ++A ++ AT
Sbjct: 128 ETTSFGGRKLLNGQFGEAAFQIGADSGEAIIMGLTSVRADDSRMGGQMFRATGMADENWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A + S + ++ ++ +++ N
Sbjct: 188 AGAGDKISINVAGLADPISVDLIEGDDIEEVATRINGQQSGVSASVRDNGELQLFSENGA 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+D+ +T L + + +E V ID+ +K
Sbjct: 248 VTLDSTNTQLAQ-GKDAAGAPVDLFAGSASEAMTVQQVDVKSVGGAQEAVGTIDSALKYI 306
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ +G+ +R+ + + + + V R+ D D A EST ++ Q QQ +
Sbjct: 307 DSQRADLGAKQNRLGHTINNLANVSENVSASNSRIRDTDFAKESTEMAKNQILQQASTSI 366
Query: 436 LSIVNNSTARILSLFR 451
L+ L+L +
Sbjct: 367 LAQAKQIPQAALTLLQ 382
>gi|152987902|ref|YP_001349643.1| flagellar hook-associated protein FlgL [Pseudomonas aeruginosa PA7]
gi|150963060|gb|ABR85085.1| flagellar hook-associated protein 3 [Pseudomonas aeruginosa PA7]
Length = 433
Score = 129 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 54/436 (12%), Positives = 123/436 (28%), Gaps = 21/436 (4%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + ++ + +L +++S+G R+ AD+ + + G
Sbjct: 3 ISTIQAFNNSVNGISRNYADLNRTFEQISTGKRILTPADDPVGSVRLLRLDQEQGLNEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ + + + + +V+ I+ + D K++ SE++Q + +L
Sbjct: 63 KTGMTEAKNSLSQEETILRSVGNVLQRIREIAGQAGDGALDSNDKKALASELSQREDELL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++ +G+ GS + G + + DS
Sbjct: 123 NLLNSRDASGKYLFSGSQGSVQPFVRNEDGTYSY---MGDESQREVQIASSTRIPVSDSG 179
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
E R +F + A
Sbjct: 180 KVLFEDIVNAARLDTRAAAGNTGDGRISVGLVEDELAFGSQFPASNPPAATDGFDIHFVS 239
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + P LP + + S A + + ++ + T
Sbjct: 240 DREYVVYDPKSLPPGYDWNTYDPNSPPAWQLSKGAIDDDPKTIDKVLYAGVSVTIDGTPK 299
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G + K G+ + + L + + +G + + A
Sbjct: 300 AGDEFNVNYKPGSEKRSLLNVVSDLRKALESSTDNQAGNDAI---------------RDA 344
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ + G+IG+ + + E FI ++ + ++ D D A +
Sbjct: 345 TAVALTNLSAVAASVDGGQGRIGARLNTVESTETFIDDVKLVNASVMSQIQDLDYAEALS 404
Query: 421 RLSALQTQQQLAVQAL 436
RLS T A Q+
Sbjct: 405 RLSLQSTIMDAAQQSY 420
>gi|294828103|ref|NP_712598.2| endoflagellar hook-filament protein [Leptospira interrogans serovar
Lai str. 56601]
gi|293385950|gb|AAN49616.2| endoflagellar hook-filament protein [Leptospira interrogans serovar
Lai str. 56601]
Length = 283
Score = 129 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 73/176 (41%), Gaps = 3/176 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ + L+ +N L+ +++S+GLR++ A D+A +++++ M++ L+
Sbjct: 3 INHNISALRTNNVLKSVNKELDKTMEKLSTGLRINRAGDDAIGFAMSEKMRTQIRGLAQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ G S + + + + + +++ ++ D K +Q E+ QL ++
Sbjct: 63 ERNVMDGVSFIQVTEGTLEQVNNILQRLRELSIQTSNGIYSNEDRKLVQLEVDQLIEEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
I + + FN L D + + +G + + L
Sbjct: 123 RIGKSAEFNHIKPLSGDHSKQSNKPIQLQVGPNQNEKLDIFIDSMNATGLQLVANG 178
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 41/116 (35%)
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ L + + A + + M+ +DT I +G+ +R+ +
Sbjct: 163 FIDSMNATGLQLVANGKKQALSSPASANAMIGILDTAISKVNQQRADLGAYYNRLEITSQ 222
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
++ + R+ DADMA + + Q + L+ N +++ L
Sbjct: 223 GLQSSYVNMVAAESRVRDADMAEQIVDYTRNQILTKSGSAMLAQANMRPDQVVKLL 278
>gi|296134279|ref|YP_003641526.1| flagellin domain protein [Thermincola sp. JR]
gi|296032857|gb|ADG83625.1| flagellin domain protein [Thermincola potens JR]
Length = 276
Score = 129 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 69/178 (38%), Gaps = 3/178 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ A KL + N L +++SSGLR++ A D+AA +I++ M+ G L+
Sbjct: 3 INNNISALFAQNKLANTNNALAKSLEKLSSGLRINRAGDDAAGLAISEKMRGQIGGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ D K I+ E+++L ++L
Sbjct: 63 VRNAQDAISLIQTAEGALNETHSILQRMRELAVQAANDTNTSGDRKKIKDELSELVNELN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
IA + FN + L A + + +
Sbjct: 123 RIASQTEFNTKKLLTGSFVGKFQIGANTGQNVKLSITTMNASALGVAASTFASIDNAS 180
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 47/129 (36%)
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
L + ++ T + +A + + ++ ID I + K
Sbjct: 147 GANTGQNVKLSITTMNASALGVAASTFASIDNASVGQSVADNLIGKIDQAISDVSDERSK 206
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G+ +R+ ++ + ++ R+ D DMA+E + + Q Q L+ N
Sbjct: 207 LGAYQNRLEHTISNLQTSAENLQAAESRIRDVDMAAEMVKFTKNQILVQAGTAMLAQANM 266
Query: 442 STARILSLF 450
+ +L L
Sbjct: 267 APQNVLKLL 275
>gi|262166246|ref|ZP_06033983.1| flagellin protein FlaF [Vibrio mimicus VM223]
gi|262025962|gb|EEY44630.1| flagellin protein FlaF [Vibrio mimicus VM223]
Length = 378
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 44/357 (12%), Positives = 97/357 (27%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SA+ A + L + L +R+SSG R++ A D+AA I+ +++ LS
Sbjct: 4 TVNTNVSALVAQRHLNSASEMLSQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLSI 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S + A+ M + ++ +++ + ++Q E+ L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSSAERTALQEEMAALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L ++ I S + + +
Sbjct: 124 NRIAETTSFAGRKLLNGHFEKASFQIGSSSGEAVQLSLRNMRSDSLDMGGFSYVAAAMAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + T +
Sbjct: 184 KKWQVAKGKQQLNISYVNALGENENIQIQAKEGDDIEELATYINGQTDKVSASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + N + + V T +
Sbjct: 244 QLYIAGKETSGTLSFSGSLANELQLNLLGYEAVDNLDISSAGGAQRAVSVIDTALKYVDG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D L + K+ D + + + +
Sbjct: 304 HRSELGALQNRFHHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTS 360
Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 47/376 (12%), Positives = 107/376 (28%), Gaps = 11/376 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+A+ ++ A +++S ++ + + + +
Sbjct: 13 VAQRHLNSASEMLSQSLERL-----SSGNRINSAKDDAAGLQISNRLETQMRGLSIAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + + ++ + + +
Sbjct: 68 ANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSSAERTALQEEMAALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ AS I + + S +++ + +A
Sbjct: 128 ETTSFAGRKLLNGHFEKASFQIGSSSGEAVQLSLRNMRSDSLDMGGFSYVAAAMADKKWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A S + + DI AT N T + + ++
Sbjct: 188 VAKGKQQLNISYVNALGENENIQIQAKEGDDIEELATYINGQTDKVSASVNEKGQLQLYI 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+T T S + L + + + VS IDT +K
Sbjct: 248 AGKETSGTLSFSGSLAN------ELQLNLLGYEAVDNLDISSAGGAQRAVSVIDTALKYV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
++G++ +R H + + + + R+ DAD A E+T++ Q QQ++
Sbjct: 302 DGHRSELGALQNRFHHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSV 361
Query: 436 LSIVNNSTARILSLFR 451
L+ +L L R
Sbjct: 362 LAQAKRQPKFVLFLLR 377
>gi|15642141|ref|NP_231773.1| flagellin [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121586833|ref|ZP_01676615.1| flagellin FlaB [Vibrio cholerae 2740-80]
gi|121727199|ref|ZP_01680366.1| flagellin FlaB [Vibrio cholerae V52]
gi|147674837|ref|YP_001217665.1| flagellin [Vibrio cholerae O395]
gi|153213294|ref|ZP_01948706.1| flagellin FlaB [Vibrio cholerae 1587]
gi|153801648|ref|ZP_01956234.1| flagellin FlaB [Vibrio cholerae MZO-3]
gi|153818803|ref|ZP_01971470.1| flagellin FlaB [Vibrio cholerae NCTC 8457]
gi|153822605|ref|ZP_01975272.1| flagellin FlaB [Vibrio cholerae B33]
gi|153825608|ref|ZP_01978275.1| flagellin FlaB [Vibrio cholerae MZO-2]
gi|153828612|ref|ZP_01981279.1| flagellin FlaB [Vibrio cholerae 623-39]
gi|227082267|ref|YP_002810818.1| flagellin FlaB [Vibrio cholerae M66-2]
gi|229507773|ref|ZP_04397278.1| flagellin B [Vibrio cholerae BX 330286]
gi|229511990|ref|ZP_04401469.1| flagellin B [Vibrio cholerae B33]
gi|229513793|ref|ZP_04403255.1| flagellin B [Vibrio cholerae TMA 21]
gi|229519126|ref|ZP_04408569.1| flagellin B [Vibrio cholerae RC9]
gi|229522095|ref|ZP_04411512.1| flagellin protein flaA [Vibrio cholerae TM 11079-80]
gi|229528846|ref|ZP_04418236.1| flagellin B [Vibrio cholerae 12129(1)]
gi|229607318|ref|YP_002877966.1| flagellin [Vibrio cholerae MJ-1236]
gi|254291379|ref|ZP_04962172.1| flagellin FlaB [Vibrio cholerae AM-19226]
gi|254849228|ref|ZP_05238578.1| flagellin FlaB [Vibrio cholerae MO10]
gi|262153491|ref|ZP_06028621.1| flagellin B [Vibrio cholerae INDRE 91/1]
gi|262167501|ref|ZP_06035207.1| flagellin B [Vibrio cholerae RC27]
gi|262192271|ref|ZP_06050428.1| flagellin B [Vibrio cholerae CT 5369-93]
gi|297582040|ref|ZP_06943959.1| flagellin FlaB [Vibrio cholerae RC385]
gi|298497836|ref|ZP_07007643.1| flagellin FlaB [Vibrio cholerae MAK 757]
gi|172044516|sp|P0C6C4|FLAB_VIBCH RecName: Full=Flagellin B
gi|172047633|sp|A5F6C4|FLAB_VIBC3 RecName: Full=Flagellin B
gi|2271028|gb|AAC01557.1| flagellin [Vibrio cholerae]
gi|9656694|gb|AAF95287.1| flagellin FlaB [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121549000|gb|EAX59039.1| flagellin FlaB [Vibrio cholerae 2740-80]
gi|121630444|gb|EAX62837.1| flagellin FlaB [Vibrio cholerae V52]
gi|124116094|gb|EAY34914.1| flagellin FlaB [Vibrio cholerae 1587]
gi|124122825|gb|EAY41568.1| flagellin FlaB [Vibrio cholerae MZO-3]
gi|126510646|gb|EAZ73240.1| flagellin FlaB [Vibrio cholerae NCTC 8457]
gi|126519853|gb|EAZ77076.1| flagellin FlaB [Vibrio cholerae B33]
gi|146316720|gb|ABQ21259.1| flagellin FlaB [Vibrio cholerae O395]
gi|148875883|gb|EDL74018.1| flagellin FlaB [Vibrio cholerae 623-39]
gi|149740759|gb|EDM54858.1| flagellin FlaB [Vibrio cholerae MZO-2]
gi|150422709|gb|EDN14663.1| flagellin FlaB [Vibrio cholerae AM-19226]
gi|227010155|gb|ACP06367.1| flagellin FlaB [Vibrio cholerae M66-2]
gi|227014038|gb|ACP10248.1| flagellin FlaB [Vibrio cholerae O395]
gi|229332620|gb|EEN98106.1| flagellin B [Vibrio cholerae 12129(1)]
gi|229341020|gb|EEO06025.1| flagellin protein flaA [Vibrio cholerae TM 11079-80]
gi|229343815|gb|EEO08790.1| flagellin B [Vibrio cholerae RC9]
gi|229348974|gb|EEO13931.1| flagellin B [Vibrio cholerae TMA 21]
gi|229351955|gb|EEO16896.1| flagellin B [Vibrio cholerae B33]
gi|229355278|gb|EEO20199.1| flagellin B [Vibrio cholerae BX 330286]
gi|229369973|gb|ACQ60396.1| flagellin B [Vibrio cholerae MJ-1236]
gi|254844933|gb|EET23347.1| flagellin FlaB [Vibrio cholerae MO10]
gi|262024073|gb|EEY42768.1| flagellin B [Vibrio cholerae RC27]
gi|262030728|gb|EEY49362.1| flagellin B [Vibrio cholerae INDRE 91/1]
gi|262031881|gb|EEY50462.1| flagellin B [Vibrio cholerae CT 5369-93]
gi|297533735|gb|EFH72577.1| flagellin FlaB [Vibrio cholerae RC385]
gi|297542169|gb|EFH78219.1| flagellin FlaB [Vibrio cholerae MAK 757]
Length = 376
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 85/221 (38%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L ++ +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 NVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ G ++ ++IQ E++ L +L
Sbjct: 64 AVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L GS + I + + T +
Sbjct: 124 NRIAETTSFGGNKLLNGSFGSKSFQIGADSGEAVMLSMGSMRSDTQAMGGKSYRAQEGKA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ L ++ K I+ D ++T
Sbjct: 184 ADWRVGAATDLTLSYTNKQGEAREVTINAKQGDDLEELATY 224
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/385 (12%), Positives = 99/385 (25%), Gaps = 13/385 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++ A D M ++++G + + +
Sbjct: 4 NVNTNVSAM-TAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQIS-----NRLTSQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + + + + +
Sbjct: 58 SRGLDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVS 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ S S I + S +++
Sbjct: 118 ALNDELNRIAETTSFGGNKLLNGSFGSKSFQIGADSGEAVMLSMGSMRSDTQAMGGKSYR 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A G + + S R + + T G T
Sbjct: 178 AQEGKAAD-------WRVGAATDLTLSYTNKQGEAREVTINAKQGDDLEELATYINGQTE 230
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
A VG S+ + G + +E V
Sbjct: 231 DVKASVGEDGKLQLFASSQKVNGDVTIGGGLGGEIGFDAGRNVTVADVNVSTVAGSQEAV 290
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
S +D +K + +G+ +R + + + V R+ D D A E+T ++
Sbjct: 291 SILDGALKAVDSQRASLGAFQNRFGHAISNLDNVNENVNASRSRIRDTDYARETTAMTKA 350
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q QQ + L+ S + LSL
Sbjct: 351 QILQQASTSVLAQAKQSPSAALSLL 375
>gi|323491436|ref|ZP_08096620.1| flagellin [Vibrio brasiliensis LMG 20546]
gi|323314305|gb|EGA67385.1| flagellin [Vibrio brasiliensis LMG 20546]
Length = 377
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 49/365 (13%), Positives = 110/365 (30%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +AM+A + L N +V +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVAAMTAQRYLNSANNAQQVSMERLSSGSKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + N +
Sbjct: 124 NRIAETTSFGGNKLLNGTYATKSFQIGADNGEAVMLTLNDMRSDNIGMGGTSYQAANSKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + T +
Sbjct: 184 KDWTVQAGANDLAITLTEKDGAEQTINISAKAGDDIEELATYINGQTDMVKASVNEDGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + A S G T + + + + + S
Sbjct: 244 QVFAGNNKVEGAVSFAGGLAGELSMGEGKAVTVDTIDVTSVGGAQESVAIVDSALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D L T+ + + +
Sbjct: 304 HRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKTQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 39/362 (10%), Positives = 93/362 (25%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + S S+I + + + N ++ +
Sbjct: 15 QRYLNSANNAQQVSMERLSSGSKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + N G+ + T +
Sbjct: 135 NKLLNGTYATKSFQIGADNGEAVMLTLNDMRSDNIGMGGTSYQAANSKDKDWTVQAGAND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + N + T G T+ A V
Sbjct: 195 LAITLTEKDGAEQTINISAKAGDDIEELATYINGQTDMVKASVNEDGQLQVFAGNNKVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T +E V+ +D+ +K + ++G+ +R
Sbjct: 255 AVSFAGGLAGELSMGEGKAVTVDTIDVTSVGGAQESVAIVDSALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + + V R+ D D A E+T L+ Q Q + L+ + LS
Sbjct: 315 FNHAINNLDNINENVNASKSRIKDTDFAKETTALTKTQILSQASSSILAQAKQAPNSALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|306819596|ref|ZP_07453292.1| flagellin protein [Mobiluncus mulieris ATCC 35239]
gi|304647626|gb|EFM44955.1| flagellin protein [Mobiluncus mulieris ATCC 35239]
Length = 481
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 44/106 (41%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
T + + + +E++ +D +I+ + A +G++ +R + + + +
Sbjct: 376 DTVTSQYLTVKDHDSSQELIRILDQKIRSVSTARSNLGAVQNRFEHTIANLNVAVENLAA 435
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D DMA E + + Q Q L+ N +LSL R
Sbjct: 436 SESRIRDTDMAQEMMQFTRNQILSQAGTSMLAQANQVPQGVLSLLR 481
Score = 74.8 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 32/87 (36%), Gaps = 3/87 (3%)
Query: 56 DNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEI 112
G G S V A+ +++ ++ ++ +I +E+
Sbjct: 1 QVGGNRQAVRNAQDGISLVQTAEGALNEVHSILQRMRVLAVQGATDSNSPDARDNINTEL 60
Query: 113 TQLQSQLRDIARGSSFNGENWLRTDLG 139
+QL+ +L I ++FNG + L
Sbjct: 61 SQLRDELDRIGNVTNFNGTSLLNGSAS 87
>gi|260776494|ref|ZP_05885389.1| flagellin protein FlaD [Vibrio coralliilyticus ATCC BAA-450]
gi|260607717|gb|EEX33982.1| flagellin protein FlaD [Vibrio coralliilyticus ATCC BAA-450]
Length = 377
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 47/357 (13%), Positives = 106/357 (29%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +AM+A + L N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVAAMTAQRYLNGANNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + N +
Sbjct: 124 NRIAETTSFGGNKLLNGTYATKSFQIGADNGEAVMLTLNDMRSDNVGMGGTSYQAANGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + Q + T +
Sbjct: 184 KDWTVQAGANDLAITLTDTDGQQQTININAKEGDDIEELATYINGQTDMVKASVDQDGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + S G T + + + + + S
Sbjct: 244 QVFAGTDKVEGAVSFGGGLAGELSMGQGQAVTVDTIDVTSVGGAQESVAIIDSALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D + +++ K K+ D L ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSS 360
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 39/362 (10%), Positives = 93/362 (25%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + S +I + + + N ++ +
Sbjct: 15 QRYLNGANNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + N G+ T +
Sbjct: 135 NKLLNGTYATKSFQIGADNGEAVMLTLNDMRSDNVGMGGTSYQAANGKDKDWTVQAGAND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + N + + T G T+ A V T
Sbjct: 195 LAITLTDTDGQQQTININAKEGDDIEELATYINGQTDMVKASVDQDGQLQVFAGTDKVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T +E V+ ID+ +K + ++G+ +R
Sbjct: 255 AVSFGGGLAGELSMGQGQAVTVDTIDVTSVGGAQESVAIIDSALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T L+ Q Q + L+ + L+
Sbjct: 315 FNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSILAQAKQTPNSALN 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|46394806|gb|AAS91571.1| flagellin subunit C [Vibrio fischeri ES114]
Length = 400
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 74/183 (40%), Gaps = 3/183 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + + +R+SSG +++ A D+AA I+ + S + L
Sbjct: 27 TVNTNVSAMTAQRYLNNATDGVNQSMERLSSGFKINSAKDDAAGLQISNRLTSQSRGLDV 86
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M+++ +++ +++ +D ++IQ E+ L +L
Sbjct: 87 AVRNANDGISIAQTAEGAMNESTNILQRMRDLSLQSANGSNTTSDREAIQQEVGALNDEL 146
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + N + +
Sbjct: 147 NRIAETTSFGGSRLLNGQFGTKSFQIGADSGEAVMLSLNNMRSDSASMGGTSYKAETALG 206
Query: 180 STD 182
Sbjct: 207 GDW 209
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/363 (10%), Positives = 96/363 (26%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N T GV + + S +I + + + ++ +
Sbjct: 38 QRYLNNATDGVNQSMERLSSGFKINSAKDDAAGLQISNRLTSQSRGLDVAVRNANDGISI 97
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + ++++D + +
Sbjct: 98 AQTAEGAMNESTNILQRMRDLSLQSANGSNTTSDREAIQQEVGALNDELNRIAETTSFGG 157
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
S + A + A + + N + + A +
Sbjct: 158 SRLLNGQFGTKSFQIGADSGEAVMLSLNNMRSDSASMGGTSYKAETALGGDWAVNAEKSE 217
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ S A + + + T G T++ A V S
Sbjct: 218 LTVSYVNRAGEEKELTINAKSGDDIEQVATYINGQTDAINASVSENGELQIVTSNDKVQG 277
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ +G + + ++ V+ +D ++ + +G+ +R
Sbjct: 278 EVKFGGSLAGELNMGAAQAETVKSIDVTTVGGSQKAVAILDAAMQFVDSNRADLGAFQNR 337
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T ++ Q QQ + L+ + L
Sbjct: 338 FSHAINNLDNINENVSASNSRIKDVDFAKETTEMTKSQILQQASSSILAQAKQAPNAALG 397
Query: 449 LFR 451
L R
Sbjct: 398 LLR 400
>gi|301602449|gb|ADK79124.1| flagellin [Geobacillus pallidus]
Length = 275
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 3/185 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++ ++L N +++SSG R++ A D+AA +I++ M+ L
Sbjct: 3 INHNISALNTYRQLSFNNTQTAKNLEKLSSGYRINRAGDDAAGLAISEKMRGQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ D +IQ EI L S++
Sbjct: 63 QKNAQDGISLIQTAEGALTETHAILQRMRELAVQAANDTNVSADRTAIQDEIDALVSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L I + S L +V +D+
Sbjct: 123 RIAGNTEFNTQNLLDGTFSGKKFHIGANSGQSITVTIGTMNANALGTTSLKIASVKVDTV 182
Query: 181 TDGTE 185
T+
Sbjct: 183 TNANA 187
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 44/123 (35%)
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ + I + + + + + ++ ID I+ + K+G+I +R
Sbjct: 153 QSITVTIGTMNANALGTTSLKIASVKVDTVTNANAAITAIDKAIEQVSTERSKLGAIQNR 212
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + + R+ D DMA E + Q A L+ N +L
Sbjct: 213 LEHTINNLGATSENLTAAESRIRDVDMAKEMMEFTKNNILTQAAQAMLAQANQVPQGVLQ 272
Query: 449 LFR 451
L R
Sbjct: 273 LLR 275
>gi|332531438|ref|ZP_08407342.1| putative flagellin [Hylemonella gracilis ATCC 19624]
gi|332039107|gb|EGI75529.1| putative flagellin [Hylemonella gracilis ATCC 19624]
Length = 565
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 52/387 (13%), Positives = 108/387 (27%), Gaps = 5/387 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I TN +++A + L + + R+SSGLRV+ A D+AA +I++ S
Sbjct: 3 LTINTNMLSLTARRNLAGSDASFTTTIQRLSSGLRVNSARDDAAGLAISERFTSQIRGQQ 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A+ +S + I+ +D +++Q E++QL ++
Sbjct: 63 QAMRNANDAVSLLQTAEGAISNVSGGLQRIRELSIQSANATNSASDRRALQLEVSQLLAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ + + F D + + +Q ++
Sbjct: 123 IDRVGVSTEF--NTLKVFDQFRNKMVGGGTTGDLDKDAVIEGLQGGWLENTEQMIQAAYG 180
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ G L I+ + A
Sbjct: 181 IAGSGNTFTIDLSVFTDGAGGTAARVTSLAGPSGPGTNITLEIDMADFVPPNLPNGGTAP 240
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
F + IA V A G + + A +I + +
Sbjct: 241 FYSDRIIAHEMVHAIMATGQSWGELVNDGGATWFLEGVAEFIHGADERVQADGVPATLAD 300
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ + ++V + T + + G TL+ A T +
Sbjct: 301 NISAWGGTSVDYSSAYTAVRYLHTMTGGNGVKDMLQYLQGTPGQTLDDAFAAVTSYASTA 360
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSI 385
+ + + I G+I
Sbjct: 361 AFVADFNANKAAFISTFNFGNADTGAI 387
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/326 (10%), Positives = 89/326 (27%), Gaps = 3/326 (0%)
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
F + + ++ + + +S G + D + + ++ + +
Sbjct: 241 FYSDRIIAHEMVHAIMATGQSW-GELVNDGGATWFLEGVAEFIHGADERVQADGVPATLA 299
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ V+ ++ +G K +A +T
Sbjct: 300 DNISAWGGTSVDYSSAYTAVRYLHTMTGGNGVKDMLQYLQGTPGQTLDDAFAAVTSYAST 359
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
S + + + A + G S + T +
Sbjct: 360 AAFVADFNANKAAFISTFNFGNADTGAIGGADVDGGPSMSAEDIVNDSGSTISTNVLSGF 419
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI--TRHANTDAYNEKLAMEEMV 365
+ + + + + + ++ + +
Sbjct: 420 NEVWKEWEESSGGGTGNILRFHIGANAKQTIDAAIGGMNLGALNLTDVDISDVNGANKAI 479
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+D ++ + +G SR+ +++ +++ R+VDAD A E+ LS
Sbjct: 480 LRMDQALEYTSRLRANLGGQMSRLEQTIANLQISAESLTASRSRIVDADFARETAALSRA 539
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ ++ N +L+L R
Sbjct: 540 QVLQQAGTAMVAQANQIPQGVLALLR 565
>gi|313904048|ref|ZP_07837428.1| flagellin domain protein [Eubacterium cellulosolvens 6]
gi|313471197|gb|EFR66519.1| flagellin domain protein [Eubacterium cellulosolvens 6]
Length = 579
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 41/362 (11%), Positives = 87/362 (24%), Gaps = 4/362 (1%)
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
+ + T +Q+ + G+ +
Sbjct: 218 LIEVDVDTSKFGDSADASTGIQATIAHEMMHGVMGIVYNSLVTSGTHPLHATPTWFIEGT 277
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
G + ++ L T ++ D ++ +
Sbjct: 278 AQVAGGIFNAGWNWNLRGVTSSTSTADVKALLSRHQDPENEPYGMGALAVAYMGQKASGE 337
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
T+S + + + D K P A + +
Sbjct: 338 TTVSAENVVKGLNNIFEQMKEKSFEDAVKAATGSYYPNDILDAFTPSNVTDDVANFVKEI 397
Query: 275 ASATYIRMGNSD----IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
G S + ++ + T TV S +
Sbjct: 398 CDQAGGDGGGSFLKGLGLSKKVSEYGFNGEYSGTKFTVNFDAGDGASDGESSDVVLQIGA 457
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
E + Y + + + + I + G G+I +R+
Sbjct: 458 TKNETLNLYRVNMSTKGLGITDTNVLTQDEAKSALESFQNAIDSTSTVRGYYGAIQNRLE 517
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ +++ + R+ D DMA E + + Q A L+ N S +LSL
Sbjct: 518 HTINNLQVTSENATAAESRIRDTDMAKEMAKYTKDNILMQAAQSMLAQANQSPQGVLSLL 577
Query: 451 RG 452
+G
Sbjct: 578 QG 579
Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats.
Identities = 57/364 (15%), Positives = 117/364 (32%), Gaps = 5/364 (1%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N A +A++ L + +L +++SSG R++ AAD+AA +I++ M+S L+ D
Sbjct: 5 HNLPATTANRHLTENRNSLNKSLEKLSSGFRINRAADDAAGLAISEAMRSKINGLTQAED 64
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLRDI 122
G + + +++ ++ + K I EI +L++++ I
Sbjct: 65 NAKDGIGLIQTTEGALTEVHSMLQRGYQLSVQAANGTYNDNARKDIDLEIQELKTEINRI 124
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK--VQITTIDYYLDPETVLLDSS 180
+ + FNG L+ A +V + ++ I D T L++S
Sbjct: 125 SENTDFNGIKLLQGTRYPFAIDKANAVDPAMLKTLKNTIGNAGEAILNTFDKLTELIESK 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
V Q + + K ++ A
Sbjct: 185 GASPSVVNGKLAKLSENVLAQAKGWVPFRGGSGLIEVDVDTSKFGDSADASTGIQATIAH 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ V + + T A A I + +R T ++ T+D
Sbjct: 245 EMMHGVMGIVYNSLVTSGTHPLHATPTWFIEGTAQVAGGIFNAGWNWNLRGVTSSTSTAD 304
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
S N Y + + +K + S ++V + + A
Sbjct: 305 VKALLSRHQDPENEPYGMGALAVAYMGQKASGETTVSAENVVKGLNNIFEQMKEKSFEDA 364
Query: 361 MEEM 364
++
Sbjct: 365 VKAA 368
>gi|114054880|gb|ABI50040.1| FlaA [Clostridium botulinum]
Length = 270
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 79/194 (40%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNLNAMNAHRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ G D ++I++EIT+L +++
Sbjct: 63 SRNSQDSISLIQTAEGALTETHSILQRMRELAVQGTNDTNVTADREAIKTEITELNNEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L I + + T + T L ++
Sbjct: 123 RISQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLSIGDMSAKTLGVSGVSVSTATLATA 182
Query: 181 TDGTERYGLLDRNH 194
+ T L +
Sbjct: 183 SIETIDTALGKVST 196
Score = 87.5 bits (214), Expect = 5e-15, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 40/113 (35%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + + + IDT + + K+G+ +R+ + +
Sbjct: 158 SIGDMSAKTLGVSGVSVSTATLATASIETIDTALGKVSTERAKLGANQNRLEHTINNLNT 217
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA E S Q A L+ N + +L L R
Sbjct: 218 SSENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLLR 270
>gi|1655807|gb|AAB17947.1| flagellin [Escherichia coli]
Length = 585
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 43/253 (16%), Positives = 77/253 (30%), Gaps = 3/253 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNLNKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGETITIDLKKIDSDTLGLNGFNVNGKGTITN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
LK + + + T G +
Sbjct: 184 KAATVSDLTSAGAKLNTTTGLYDLKTENTLLTTDAAFDKLGNGDKVTVGGVDYTYNAKSG 243
Query: 240 DQAKGIATIPVPL 252
D +T +
Sbjct: 244 DFTTTKSTAGTGV 256
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/296 (13%), Positives = 79/296 (26%)
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
D + + D + K + + L D +
Sbjct: 290 TKDGTVSFETDSAGNITIGGSQAYVDDAGNLTTNNAGSAAKADMKALLKAASEGSDGASL 349
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ A V + + TS S S
Sbjct: 350 TFNGTEYTIAKATPATTTPVAPLIPGGITYQATVSKDVVLSETKAAAATSSITFNSGVLS 409
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
T + + + TV+ N T + +
Sbjct: 410 KTIGFTAGESSDAAKSYVDDKGGITNVADYTVSYSVNKDNGSVTVAGYASATDTNKDYAP 469
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + V +N T+ + A ++ +D I +G+I +R+ +
Sbjct: 470 AIGTAVNVNSAGKITTETTSAGSATTNPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNL 529
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 530 NNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 585
>gi|145997|gb|AAA23799.1| flagellin [Escherichia coli]
Length = 595
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 50/372 (13%), Positives = 96/372 (25%), Gaps = 3/372 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDAISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGSGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + S A +
Sbjct: 184 KAATISDLTAAKMDAATNTITTTNNALTASKALDQLKDGDTVTIKADAAQTATVYTYNAS 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + A + ++ S A + T +
Sbjct: 244 AGNFSFSNVSNNTSAKAGDVAASLLPPAGQTASGVYKAASGEVNFDVDANGKITIGGQKA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + S+ T + T A +
Sbjct: 304 YLTSDGNLTTNDAGGATAATLDGLFKKAGDGQSIGFKKTASVTMGGTTYNFKTGADADAA 363
Query: 360 AMEEMVSFIDTQ 371
VSF DT
Sbjct: 364 TANAGVSFTDTA 375
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/373 (11%), Positives = 98/373 (26%), Gaps = 2/373 (0%)
Query: 82 SKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSS 141
+ + S + ++ D+A ++
Sbjct: 223 DTVTIKADAAQTATVYTYNASAGNFSFSNVSNNTSAKAGDVAASLLPPAGQTASGVYKAA 282
Query: 142 TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
+ + V + G+ T D L ++ + I +
Sbjct: 283 SGEVNFDVDANGKITIGGQKAYLTSDGNLTTNDAGGATAATLDGLFKKAGDGQSIGFKKT 342
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
+ + Y+ A+ T A + A T
Sbjct: 343 ASVTMGGTTYNFKTGADADAATANAGVSFTDTASKETVLNKVATAKQGKAVAADGDTSAT 402
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
+ SG ++ +A + + T T T Y +D
Sbjct: 403 ITYKSGVQTYQAVFAAGDGTASAKYADKADVSNATATYTDADGEMTTIGSYTTKYSIDAN 462
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM--EEMVSFIDTQIKCATAAA 379
+ + + + ++ + ++ + +D I
Sbjct: 463 NGKVTVDSGTGTGKYAPKVGAEVYVSANGTLTTDATSEGTVTKDPLKALDEAISSIDKFR 522
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G+I +R+ + + + R+ DAD A+E + +S Q QQ L+
Sbjct: 523 PSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKA 582
Query: 440 NNSTARILSLFRG 452
N ++LSL +G
Sbjct: 583 NQVPQQVLSLLQG 595
>gi|194014229|ref|ZP_03052846.1| flagellin [Bacillus pumilus ATCC 7061]
gi|194013255|gb|EDW22820.1| flagellin [Bacillus pumilus ATCC 7061]
Length = 323
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 76/205 (37%), Gaps = 5/205 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ +L N + +++SSGL+++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTLNRLSANNGASQKNMEKLSSGLKINRAGDDAAGLAISEKMRGQIRGLKMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS----KSIQSEITQLQSQL 119
S G S + A+ +++ ++ ++ + GT +I+ EIT L ++
Sbjct: 63 SKNAQDGISLIQTAEGALTETHSILQRVRELVVQAGNTGTQQGEDLTAIKDEITALVEEV 122
Query: 120 RDIARGSSFNGENWLRTDL-GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
I+ + FNG+ L G T + G + + +
Sbjct: 123 DGISNRTEFNGKKLLNGTFNGVGTPGTPANPPTDPDDPSTGTPAVPATPGDALVFQIGAN 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVL 203
++ + +
Sbjct: 183 ATQQIKVNIQDMSAAALGVTDADGA 207
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 26/182 (14%), Positives = 53/182 (29%)
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + D T T A + +
Sbjct: 142 NGVGTPGTPANPPTDPDDPSTGTPAVPATPGDALVFQIGANATQQIKVNIQDMSAAALGV 201
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRI 389
V T A ++ ++ ++ +D IK +A K+G++ +R+
Sbjct: 202 TDADGAVETGKSVKDIDVSKFETIAADDDGGFDDQLAIVDGAIKQVSAQRAKLGAVQNRL 261
Query: 390 HLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
+ + + + R+ D DMA E + + Q + L+ N +L L
Sbjct: 262 EHTINNLGASSENLTAAESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQQPQNVLQL 321
Query: 450 FR 451
R
Sbjct: 322 LR 323
>gi|262276404|ref|ZP_06054213.1| flagellin protein FlaD [Grimontia hollisae CIP 101886]
gi|262220212|gb|EEY71528.1| flagellin protein FlaD [Grimontia hollisae CIP 101886]
Length = 379
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 71/206 (34%), Gaps = 3/206 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN AM+A + L +L +R+SSG R++ A D+AA I+ + S + L
Sbjct: 4 TVNTNVPAMTAQRYLNSSTDSLNASMERLSSGFRINSAKDDAAGLQISNRLISQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M ++ +++ +++ + +IQ EI LQ +L
Sbjct: 64 AVRNANDGISMSQTAEGAMEESTNILQRMRDLALQSANGANGSQERGAIQEEIVALQDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ I + + + + + S
Sbjct: 124 NRIAETTSFGGAKLLNGTFGTKAFQIGADAGEAVFMEFKNIRADEALMGGATYKATVAAS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKD 205
Sbjct: 184 VDMAAWTATAGATLSMAITNADGTTA 209
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/375 (10%), Positives = 102/375 (27%), Gaps = 9/375 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
A+ ++ + D ++ ++ + + + S
Sbjct: 13 TAQRYLNSSTDSLNASMERL-----SSGFRINSAKDDAAGLQISNRLISQSRGLDVAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S + A+ + + + + +
Sbjct: 68 ANDGISMSQTAEGAMEESTNILQRMRDLALQSANGANGSQERGAIQEEIVALQDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ + + I + ++A A A AT+ + A
Sbjct: 128 ETTSFGGAKLLNGTFGTKAFQIGADAGEAVFMEFKNIRADEALMGGATYKATVAASVDMA 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
+ S + + + +AT + V G +++V + G
Sbjct: 188 AWTATAGATLSMAITNADGTTATINVSAKAGDDVEEVATYINGQADGQVSASVTEDGELQ 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ S S + + + V +D ++
Sbjct: 248 VVAASGSDVA----FTGALATSLGIAGAAKVDETVQDVDVSTVGGAQRAVGLVDNAMQYI 303
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ ++G+ +R+ + + + V R+ D D A E+T+ + Q QQ
Sbjct: 304 DSHRAELGAKQNRLSHAIANLDNVNENVSASNSRIRDVDFAKETTQFTKSQILQQSGTSI 363
Query: 436 LSIVNNSTARILSLF 450
L+ + + LSL
Sbjct: 364 LAQAKQAPSAALSLL 378
>gi|134300272|ref|YP_001113768.1| flagellin domain-containing protein [Desulfotomaculum reducens
MI-1]
gi|134052972|gb|ABO50943.1| flagellin domain protein [Desulfotomaculum reducens MI-1]
Length = 548
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 53/377 (14%), Positives = 119/377 (31%), Gaps = 3/377 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++L + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTYRQLSNNGIQTNKALEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI---TAGVERGTDSKSIQSEITQLQSQLR 120
+ G S + A+ +++ ++ ++ G D K++Q E+TQL+S++
Sbjct: 63 ARNAQDGISMIQTAEGALNETHSILQRMRELADQSVNGTNTADDRKALQDEVTQLKSEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN + L L + + + T L + + +
Sbjct: 123 RIGNTTEFNTQKLLNGSLKGAAGAAVGANTTIGGVVGKLTAATMTGANALKGDWSGANLT 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ ++ + + S +T K T + A
Sbjct: 183 FGTDTLTIDGQKIDVNWDTLLTTEEKSLLNSNLSSADATTLNKAKDTIINAINTAIDNSG 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + + T GT + + A+ T + A + +
Sbjct: 243 KNVTHISGYLDGTNKMVLQSGTQGTKSEVTVTTIAAGTSVGAKLLSQTDGAVSAAANLGT 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
Y + +A Y DT + + + + A
Sbjct: 303 DKYNGTNIAAQKFDVYLGDTLIGQSGALTVNNGDTMASAATALQTQINAAINTYNTGTAK 362
Query: 361 MEEMVSFIDTQIKCATA 377
+++ T
Sbjct: 363 TAGQEGYVEAVTVTVTD 379
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 41/143 (28%), Gaps = 14/143 (9%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ + + + + ++ +D+ IK
Sbjct: 413 TEAAGNGGMTFQIGANRSQTITFGIGDMRSAALGISGVDISTAGGASTALTSLDSAIKNV 472
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRD-------AVEKGVGRLVDADMASESTRLSALQTQ 428
++ K+G++ +R+ + + R+ D DMA E +
Sbjct: 473 SSERSKLGAVQNRLEHTIN-------NLNTSSENLTAAESRIRDVDMAKEMMEFTKNNIL 525
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
Q A L+ N +L L R
Sbjct: 526 SQAAQAMLAQANQQPQGVLQLLR 548
>gi|59712471|ref|YP_205247.1| flagellin [Vibrio fischeri ES114]
gi|59480572|gb|AAW86359.1| Flagellin FlaC [Vibrio fischeri ES114]
Length = 377
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 74/183 (40%), Gaps = 3/183 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + + +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 TVNTNVSAMTAQRYLNNATDGVNQSMERLSSGFKINSAKDDAAGLQISNRLTSQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M+++ +++ +++ +D ++IQ E+ L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNESTNILQRMRDLSLQSANGSNTTSDREAIQQEVGALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + N + +
Sbjct: 124 NRIAETTSFGGSRLLNGQFGTKSFQIGADSGEAVMLSLNNMRSDSASMGGTSYKAETALG 183
Query: 180 STD 182
Sbjct: 184 GDW 186
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/363 (10%), Positives = 96/363 (26%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N T GV + + S +I + + + ++ +
Sbjct: 15 QRYLNNATDGVNQSMERLSSGFKINSAKDDAAGLQISNRLTSQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + ++++D + +
Sbjct: 75 AQTAEGAMNESTNILQRMRDLSLQSANGSNTTSDREAIQQEVGALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
S + A + A + + N + + A +
Sbjct: 135 SRLLNGQFGTKSFQIGADSGEAVMLSLNNMRSDSASMGGTSYKAETALGGDWAVNAEKSE 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ S A + + + T G T++ A V S
Sbjct: 195 LTVSYVNRAGEEKELTINAKSGDDIEQVATYINGQTDAINASVSENGELQIVTSNDKVQG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ +G + + ++ V+ +D ++ + +G+ +R
Sbjct: 255 EVKFGGSLAGELNMGAAQAETVKSIDVTTVGGSQKAVAILDAAMQFVDSNRADLGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T ++ Q QQ + L+ + L
Sbjct: 315 FSHAINNLDNINENVSASNSRIKDVDFAKETTEMTKSQILQQASSSILAQAKQAPNAALG 374
Query: 449 LFR 451
L R
Sbjct: 375 LLR 377
>gi|6009845|dbj|BAA85087.1| flagellin [Escherichia coli]
Length = 570
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 57/414 (13%), Positives = 113/414 (27%), Gaps = 9/414 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSQSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + + +V +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSSTLKLTGFNVNGSVANTA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+T V + V T + LA + +N
Sbjct: 184 ATKDELAAAAAAAGTTPAVGTDGVTKYTVDAGLNKATAANVFANLADGAVVDASISNGFG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A T + +G + S S A + + + +
Sbjct: 244 AAAATDYTYNKATNDFTFNASIAAGAAAGDSNSAALQSFLTPKAGDTANLSVKIGTTSVN 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
++ + + Y+D+ + + T D
Sbjct: 304 VVLASDGKITAKDGSALYIDSTGNLTQNSAGTVTAATLDGLTKNHDATGAVGVDITTADG 363
Query: 360 AMEEMVSFIDTQIKCATAA------AGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
A + + + A ++ S + D +
Sbjct: 364 ATISLAGSANAATGTQSGAITLKNVRISADALQSAAKGTVINVDNGADDISVSK 417
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/321 (14%), Positives = 90/321 (28%)
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
T + + + + ++ +Q D + + T D
Sbjct: 250 YTYNKATNDFTFNASIAAGAAAGDSNSAALQSFLTPKAGDTANLSVKIGTTSVNVVLASD 309
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
K + D ++ S T T A ATI +
Sbjct: 310 GKITAKDGSALYIDSTGNLTQNSAGTVTAATLDGLTKNHDATGAVGVDITTADGATISLA 369
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
A A + + A + G S++ T
Sbjct: 370 GSANAATGTQSGAITLKNVRISADALQSAAKGTVINVDNGADDISVSKTGVVTTGGAPTY 429
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ + T +T + + V + TDA + + + +D
Sbjct: 430 TDADGKLTTTNTVDYFLQTDGSVTNGSGKGVYTDAAGKFTTDAATKAATTTDPLKALDDA 489
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I +G+I +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 490 ISQIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQA 549
Query: 432 AVQALSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 550 GNSVLAKANQVPQQVLSLLQG 570
>gi|168333365|ref|ZP_02691645.1| flagellin domain protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 542
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 48/369 (13%), Positives = 94/369 (25%), Gaps = 8/369 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A+ L N +R+SSGL++S + D+ A +I+ M++ +L+
Sbjct: 3 INYNIPALKVVNILNKANEAQSSSMERLSSGLQISSSKDDPAGMAISLKMRAQLDSLAQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S S + A++ +S A ++ I+ D + IQ E+ +L +L
Sbjct: 63 SRNSSDAISLIQTAESSLSSAHEITKRIREVAVQSANETYTDADREKIQIEVDELIKELD 122
Query: 121 DIARGSSFNGENWLRT-----DLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
++ + FN L D G K + + + +D +
Sbjct: 123 RLSNETDFNQHKILSGDKELADSGFQITQTGKYNGLQAQYSISLXMPNPGDKFNIDGQPF 182
Query: 176 LLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
S+ T ++ + + T A G+
Sbjct: 183 EFYDSSVSTTLADPTAIGLDLQGDWKKDLSYASLPNFNIDPTGTDLVITAKNPGSSANTN 242
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
T + + S + G+ +
Sbjct: 243 PITVTTSSIATKQITQGIDSKEYATYEIVLPSINSGPHDPEPHKFQAGSGFTIDGVVFEF 302
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
D A VG D + + +
Sbjct: 303 YDREDYDNGEYDGAGVGXPTTKEDGSYLLDFDLASXVXGQEYPNFHLDTVNMGTSYDPMV 362
Query: 356 NEKLAMEEM 364
Sbjct: 363 LTAKNSGIA 371
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 42/142 (29%)
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
++ DT T + + + + + + +D
Sbjct: 400 QIDIASSKPDTLGLTSKTPIYGFTDYLILNDDPLTAANENRYGISLLTMEDSQFALGAVD 459
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
I ++ +G+ +R+ I ++ R+ D DMA E +
Sbjct: 460 RAIAEISSRRAYLGATQNRLEYTVKNISNNSVNLDGARSRIQDTDMAKEMVLFTKDGILS 519
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q A L+ N ++ L +
Sbjct: 520 QAANAMLAQANQRPQQVFQLLQ 541
>gi|298571377|gb|ADI87719.1| putative flagellin [uncultured Nitrospirae bacterium MY3-5B]
Length = 336
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 46/327 (14%), Positives = 91/327 (27%), Gaps = 3/327 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN S+++A + L + L+ R+SSGLR++ A D+AA +I M + L+
Sbjct: 4 VINTNISSINAQRNLMRVQSPLQEAMQRLSSGLRINSAKDDAAGLAIVTRMTTQTRGLTV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S V + + + + + ++ +D +Q E+ L ++
Sbjct: 64 AIRNANDGISMVQTGEGALEEVTNNLQRMRELSVQALSGQYGASDIGFMQQEVNALIEEV 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SFN + L GS A + +
Sbjct: 124 GRIAEQTSFNNKKLLAGGFGSRLAVAYMASDTTIDIHIASMNSDVLGGKTFTATGKDGAF 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + A+
Sbjct: 184 MMLKDIHTATTVGIQGVGDGSWQSGAGAPYAWSVTAKAQIGYTGQASLLVNDSTTLTGLA 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+A I +A + G ++ +V + + I R +
Sbjct: 244 SRASNAIAIIDGALSAVTNARSYMGAKANQFDAVVRNLSNIVETTMASRSRIYDADFAAE 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLD 326
T + + S+
Sbjct: 304 TASLTKYMIMQQSGISVLSQANSSPQG 330
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/210 (14%), Positives = 62/210 (29%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A+ + L A S + A+ AT K+
Sbjct: 127 AEQTSFNNKKLLAGGFGSRLAVAYMASDTTIDIHIASMNSDVLGGKTFTATGKDGAFMML 186
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
++ +S ++ + +T
Sbjct: 187 KDIHTATTVGIQGVGDGSWQSGAGAPYAWSVTAKAQIGYTGQASLLVNDSTTLTGLASRA 246
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ ID + T A +G+ +++ + + + R+ DAD A+E+
Sbjct: 247 SNAIAIIDGALSAVTNARSYMGAKANQFDAVVRNLSNIVETTMASRSRIYDADFAAETAS 306
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ QQ + LS N+S +LSL +
Sbjct: 307 LTKYMIMQQSGISVLSQANSSPQGVLSLLK 336
>gi|6009839|dbj|BAA85084.1| flagellin [Escherichia coli]
gi|30059866|gb|AAP13305.1| FliC [Escherichia coli]
Length = 595
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 51/372 (13%), Positives = 97/372 (26%), Gaps = 3/372 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGSGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + S A +
Sbjct: 184 KAATISDLTAAKMDAATNTITTTNNALTASKALDQLKDGDTVTIKADAAQTATVYTYNAS 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + A + ++ S A + T +
Sbjct: 244 AGNFSFSNVSNNTSAKAGDVAASLLPPAGQTASGVYKAASGEVNFDVDANGKITIGGQKA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + S+ T + T A +
Sbjct: 304 YLTSDGNLTTNDAGGATAATLDGLFKKAGDGQSIGFKKTASVTMGGTTYNFKTGADADAA 363
Query: 360 AMEEMVSFIDTQ 371
VSF DT
Sbjct: 364 TANAGVSFTDTA 375
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/373 (11%), Positives = 98/373 (26%), Gaps = 2/373 (0%)
Query: 82 SKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSS 141
+ + S + ++ D+A ++
Sbjct: 223 DTVTIKADAAQTATVYTYNASAGNFSFSNVSNNTSAKAGDVAASLLPPAGQTASGVYKAA 282
Query: 142 TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
+ + V + G+ T D L ++ + I +
Sbjct: 283 SGEVNFDVDANGKITIGGQKAYLTSDGNLTTNDAGGATAATLDGLFKKAGDGQSIGFKKT 342
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
+ + Y+ A+ T A + A T
Sbjct: 343 ASVTMGGTTYNFKTGADADAATANAGVSFTDTASKETVLNKVATAKQGKAVAADGDTSAT 402
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
+ SG ++ +A + + T T T Y +D
Sbjct: 403 ITYKSGVQTYQAVFAAGDGTASAKYADKADVSNATATYTDADGEMTTIGSYTTKYSIDAN 462
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM--EEMVSFIDTQIKCATAAA 379
+ + + + ++ + ++ + +D I
Sbjct: 463 NGKVTVDSGTGTGKYAPKVGAEVYVSANGTLTTDATSEGTVTKDPLKALDEAISSIDKFR 522
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G+I +R+ + + + R+ DAD A+E + +S Q QQ L+
Sbjct: 523 SSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKA 582
Query: 440 NNSTARILSLFRG 452
N ++LSL +G
Sbjct: 583 NQVPQQVLSLLQG 595
>gi|187778696|ref|ZP_02995169.1| hypothetical protein CLOSPO_02291 [Clostridium sporogenes ATCC
15579]
gi|187772321|gb|EDU36123.1| hypothetical protein CLOSPO_02291 [Clostridium sporogenes ATCC
15579]
Length = 274
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + N +++SSGLR++ A D+AA SI++ M++ L+
Sbjct: 3 INHNLNAMNAHRNMGINIGNSAKSMEKLSSGLRINRAGDDAAGLSISEKMRAQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D +I+ EIT L++++
Sbjct: 63 SRNSQDGISLIQTAEGALNETHSILQRMRELGVQAANDTNVTVDRAAIKDEITSLKTEID 122
Query: 121 DIARGSSFNGENWLRTD 137
IA+ + FN +N L D
Sbjct: 123 RIAKTTQFNEKNLLNGD 139
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 42/111 (37%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
+ + + A + + + ++ IK + K+G+ +R+ +
Sbjct: 164 SNMGSASLGVSNLAVDTHDNARKTIDSVNKAIKDVSTQRSKLGAFQNRLEHTISNLDNAS 223
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA E S QQ A L+ N + +L L R
Sbjct: 224 ENLQAAESRVRDVDMAKEMMNFSKNNILQQAAQAMLAQANQAPQGVLQLLR 274
>gi|262404490|ref|ZP_06081045.1| flagellin protein FlaF [Vibrio sp. RC586]
gi|262349522|gb|EEY98660.1| flagellin protein FlaF [Vibrio sp. RC586]
Length = 378
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/357 (12%), Positives = 99/357 (27%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SA+ A + L + L +R+SSG R++ A D+AA I+ +++ LS
Sbjct: 4 TVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLSI 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S + A+ M + ++ +++ + ++Q E+ L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERTALQEEMAALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L ++ I S + + +
Sbjct: 124 NRIAETTSFAGRKLLNGHFEKASFQIGASSGEAVQLSLRNMRSDSLDMGGFSYVASAMAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + + + T +
Sbjct: 184 KKWQVAKGKQQLNINYVNAQGENENIQLQAKEGDDIEELATYINGQTDKVSASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + N + + V T +
Sbjct: 244 QLYIAGKETAGTLSFSGSLANELQINLLGYEAVDNLDISSAGGAQRAVSVIDTALKYVDG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D L + K+ D + + + +
Sbjct: 304 HRSELGAMQNRFHHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTS 360
Score = 99.8 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 45/376 (11%), Positives = 106/376 (28%), Gaps = 11/376 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+A+ ++ A ++++ ++ + + + +
Sbjct: 13 VAQRHLNSASEMLNQSLERL-----SSGNRINSAKDDAAGLQISNRLETQMRGLSIAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + + ++ + +
Sbjct: 68 ANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERTALQEEMAALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ AS I + S +++ + +A+
Sbjct: 128 ETTSFAGRKLLNGHFEKASFQIGASSGEAVQLSLRNMRSDSLDMGGFSYVASAMADKKWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A + + + DI AT N T + + ++
Sbjct: 188 VAKGKQQLNINYVNAQGENENIQLQAKEGDDIEELATYINGQTDKVSASVNEKGQLQLYI 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+T T S + L + + + VS IDT +K
Sbjct: 248 AGKETAGTLSFSGSLAN------ELQINLLGYEAVDNLDISSAGGAQRAVSVIDTALKYV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
++G++ +R H + + + + R+ DAD A E+T++ Q QQ++
Sbjct: 302 DGHRSELGAMQNRFHHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSV 361
Query: 436 LSIVNNSTARILSLFR 451
L+ +L L R
Sbjct: 362 LAQAKRQPKFVLFLLR 377
>gi|197335550|ref|YP_002156689.1| flagellin subunit C [Vibrio fischeri MJ11]
gi|197317040|gb|ACH66487.1| flagellin subunit C [Vibrio fischeri MJ11]
Length = 377
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 74/183 (40%), Gaps = 3/183 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + + +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 TVNTNVSAMTAQRYLNNATDGVNQSMERLSSGFKINSAKDDAAGLQISNRLTSQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M+++ +++ +++ +D ++IQ E+ L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNESTNILQRMRDLSLQSANGSNTTSDREAIQQEVGALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + N + +
Sbjct: 124 NRIAETTSFGGSRLLNGQFGTKSFQIGADSGEAVMLSLNNMRSDSASMGGTSYKAETALG 183
Query: 180 STD 182
Sbjct: 184 GDW 186
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/363 (10%), Positives = 96/363 (26%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N T GV + + S +I + + + ++ +
Sbjct: 15 QRYLNNATDGVNQSMERLSSGFKINSAKDDAAGLQISNRLTSQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + ++++D + +
Sbjct: 75 AQTAEGAMNESTNILQRMRDLSLQSANGSNTTSDREAIQQEVGALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
S + A + A + + N + + A +
Sbjct: 135 SRLLNGQFGTKSFQIGADSGEAVMLSLNNMRSDSASMGGTSYKAETALGGDWAVNAEKSD 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ S A + + + T G T++ A V S
Sbjct: 195 LTVSYVNRAGEEKELTINAKSGDDIEQVATYINGQTDAVNASVSENGELQIVTSNDKVQG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ +G + + ++ V+ +D ++ + +G+ +R
Sbjct: 255 EVKFGGSLAGELNMGAAQAETVKSIDVTTVGGSQKAVAILDAAMQFVDSNRADLGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T ++ Q QQ + L+ + L
Sbjct: 315 FSHAINNLDNINENVSASNSRIKDVDFAKETTEMTKSQILQQASSSILAQAKQAPNAALG 374
Query: 449 LFR 451
L R
Sbjct: 375 LLR 377
>gi|254226370|ref|ZP_04919959.1| flagellin FlaB [Vibrio cholerae V51]
gi|125621120|gb|EAZ49465.1| flagellin FlaB [Vibrio cholerae V51]
Length = 376
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 85/221 (38%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L ++ +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 NVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ G ++ ++IQ E++ L +L
Sbjct: 64 AVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L GS + I + + T +
Sbjct: 124 NRIAETTSFGGNKLLNGSFGSKSFQIGADSGEAVMLSMGSMRSDTQAMGGKSYRAQEGKA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ L ++ K I+ D ++T
Sbjct: 184 ADWRVGAATDLTLSYTNKQGEAREVTINAKQGDDLEELATY 224
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/385 (12%), Positives = 101/385 (26%), Gaps = 13/385 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++ A D M ++++G + + +
Sbjct: 4 NVNTNVSAM-TAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQIS-----NRLTSQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + + + + +
Sbjct: 58 SRGLDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVS 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ S S I + S +++
Sbjct: 118 ALNDELNRIAETTSFGGNKLLNGSFGSKSFQIGADSGEAVMLSMGSMRSDTQAMGGKSYR 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A A + + +K + G+ + T G T
Sbjct: 178 AQEGKAADWRVGAATDLTLSYTNKQGEAREVTINAKQGD-------DLEELATYINGQTE 230
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
A VG S+ + G + +E V
Sbjct: 231 DVKASVGEDGKLQLFASSQKVNGDVTIGGGLGGEIGFDAGRNVTVADVNVSTVAGSQEAV 290
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
S +D +K + +G+ +R + + + V R+ D D A E+T ++
Sbjct: 291 SILDGALKAVDSQRASLGAFQNRFSHAISNLDNVNENVNASRSRIRDTDYARETTAMTKA 350
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q QQ + L+ S + LSL
Sbjct: 351 QILQQASTSVLAQAKQSPSAALSLL 375
>gi|159171923|gb|ABW96218.1| FlaB [Vibrio harveyi]
Length = 308
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 80/215 (37%), Gaps = 3/215 (1%)
Query: 9 SAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
SAM+A + L + + +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 SAMTAQRYLNNAAEGQQKSMERLSSGYKINSAKDDAAGLQISNRLNAQSRGLDMAVKNAN 63
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARG 125
G S +A+ M+++ +++ +++ + +IQ E+T L +L IA
Sbjct: 64 DGISIAQVAEGAMNESTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDELNRIAET 123
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+SF G L G+ + I + + T+ ++
Sbjct: 124 TSFGGNKLLNGTYGTQSFQIGADSGEAVMLSMGNLRSDTSAMGGKSYAAEDGKDASWTVS 183
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
L + K + + D ++T
Sbjct: 184 DKTELKMTYTNKQGEEQELTVQAKQGDDIEQLATY 218
Score = 36.6 bits (82), Expect = 8.0, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 14/35 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRI 389
+E V+ ID +K + +G+ +R
Sbjct: 274 VTSVAGSQEAVAIIDGALKSVDSQRASLGAFQNRF 308
>gi|269976126|ref|ZP_06183124.1| flagellin [Mobiluncus mulieris 28-1]
gi|269935672|gb|EEZ92208.1| flagellin [Mobiluncus mulieris 28-1]
Length = 473
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 20/149 (13%), Positives = 50/149 (33%)
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
+ + + L + ++ + + + +
Sbjct: 325 NMDIKLDHSLVKAGNTPGTGDEAVTLTALDANGGTLATVEDYTEKKTNAYLTVKDHDSAQ 384
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+++ +D +I+ + A +G++ +R + + + + R+ D DMA E +
Sbjct: 385 DLIRVLDQKIQSVSTARSNLGAVQNRFEHTITNLNVAVENLAASESRVRDTDMAQEMMQF 444
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q Q L+ N +LSL R
Sbjct: 445 TRNQILSQAGTSMLAQANQVPQGVLSLLR 473
>gi|261253605|ref|ZP_05946178.1| flagellin protein FlaD [Vibrio orientalis CIP 102891]
gi|260936996|gb|EEX92985.1| flagellin protein FlaD [Vibrio orientalis CIP 102891]
Length = 377
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 69/183 (37%), Gaps = 3/183 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNSANSAQQTSMERLSSGFKINSAKDDAAGMQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISMAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + N +
Sbjct: 124 NRIAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLTMNNMRSDNVMMGGNSYVAANGQG 183
Query: 180 STD 182
Sbjct: 184 KDW 186
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/362 (9%), Positives = 90/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNSANSAQQTSMERLSSGFKINSAKDDAAGMQISNRLNVQSRGLDVAVRNANDGISM 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + N + + +
Sbjct: 135 NKLLNGTFATKSFQIGADNGEAVMLTMNNMRSDNVMMGGNSYVAANGQGKDWSVQAGAND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ S+ + + + T G T+ A VG
Sbjct: 195 LTISLTDKFGGAQNITINAKEGDDIEELATYINGQTDLVKASVGEEGNLQLFTDNNKVDG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G +T +E V+ +D +K + ++G+ +R
Sbjct: 255 AATFGGSLAGELSFGAAQAVTVDTIDVTSVAGAQESVAIVDAALKFVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + ++ + + V R+ D D A E+T L+ Q Q + L+ + L
Sbjct: 315 FNHAINNLENINENVNASNSRIKDTDFAKETTALTKSQILTQASSSVLAQAKQAPNSALG 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|187934919|ref|YP_001885019.1| flagellin [Clostridium botulinum B str. Eklund 17B]
gi|187723072|gb|ACD24293.1| flagellin [Clostridium botulinum B str. Eklund 17B]
Length = 270
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 79/194 (40%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNMNAMNAHRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ G D ++I++EIT+L +++
Sbjct: 63 SRNSQDSISLIQTAEGALTETHSILQRMRELAVQGTNDTNVTADREAIKTEITELNNEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L I + + T + T L ++
Sbjct: 123 RISQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLSIGDMSAKTLGVSGVSVSTATLATA 182
Query: 181 TDGTERYGLLDRNH 194
+ T L +
Sbjct: 183 SIETIDTALGKVST 196
Score = 86.7 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 40/113 (35%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + + + IDT + + K+G+ +R+ + +
Sbjct: 158 SIGDMSAKTLGVSGVSVSTATLATASIETIDTALGKVSTERAKLGANQNRLEHTINNLNT 217
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA E S Q A L+ N + +L L R
Sbjct: 218 SSENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLLR 270
>gi|33590235|gb|AAQ22679.1| flagellin [Escherichia coli]
Length = 595
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 50/372 (13%), Positives = 96/372 (25%), Gaps = 3/372 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGSGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + S A +
Sbjct: 184 KAATISDLTAAKMDAATNTITTTNNALTASKALDQLKDGDTVTIKADAAQTATVYTYNAS 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + ++ S A + T +
Sbjct: 244 AGNFSFSNVSNNTSEKAGDVAASLLPPAGQTASGVYKAASGEVNFDVDANGKITIGGQKA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + S+ T + T A +
Sbjct: 304 YLTSDGNLTTNDAGGATAATLDGLFKKAGDGQSIGFKKTASVTMGGTTYNFKTGADADAA 363
Query: 360 AMEEMVSFIDTQ 371
VSF DT
Sbjct: 364 TANAGVSFTDTA 375
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/373 (11%), Positives = 96/373 (25%), Gaps = 2/373 (0%)
Query: 82 SKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSS 141
+ + S + + D+A ++
Sbjct: 223 DTVTIKADAAQTATVYTYNASAGNFSFSNVSNNTSEKAGDVAASLLPPAGQTASGVYKAA 282
Query: 142 TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
+ + V + G+ T D L ++ + I +
Sbjct: 283 SGEVNFDVDANGKITIGGQKAYLTSDGNLTTNDAGGATAATLDGLFKKAGDGQSIGFKKT 342
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
+ + Y+ A+ T A A T
Sbjct: 343 ASVTMGGTTYNFKTGADADAATANAGVSFTDTASKETVLNKVATAKQGKAAAADGDTSAT 402
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
+ SG ++ +A + + T T T Y +D
Sbjct: 403 ITYKSGVQTYQAVFAAGDGTASAKYADKADVSNATATYTDADGEMTTIGSYTTKYSIDAN 462
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM--EEMVSFIDTQIKCATAAA 379
+ + + + ++ + ++ + +D I
Sbjct: 463 NGKVTVDSGTGTGKYAPKVGAEVYVSANGTLTTDATSEGTVTKDPLKALDEAISSIDKFR 522
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G+I +R+ + + + R+ DAD A+E + +S Q QQ L+
Sbjct: 523 SSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKA 582
Query: 440 NNSTARILSLFRG 452
N ++LSL +G
Sbjct: 583 NQVPQQVLSLLQG 595
>gi|114054947|gb|ABI50073.1| FlaA [Clostridium botulinum]
Length = 270
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 76/194 (39%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNLNAMNAHRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ G D ++I++EIT+L +++
Sbjct: 63 SRNSQDSISLIQTAEGALTETHSILQRMRELAVQGTNDTNVTADREAIKTEITELNNEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L I + + T + +
Sbjct: 123 RISQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLSIGDMSAKTLGVSGVSVSDASKATD 182
Query: 181 TDGTERYGLLDRNH 194
+ T L +
Sbjct: 183 SIATIDTALGKVST 196
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 43/113 (38%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + ++ + ++ IDT + + K+G+ +R+ + +
Sbjct: 158 SIGDMSAKTLGVSGVSVSDASKATDSIATIDTALGKVSTERAKLGANQNRLEHTINNLNT 217
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA E S Q A L+ N + +L L R
Sbjct: 218 SSENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLLR 270
>gi|254506945|ref|ZP_05119084.1| flagellin [Vibrio parahaemolyticus 16]
gi|219550230|gb|EED27216.1| flagellin [Vibrio parahaemolyticus 16]
Length = 377
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 43/321 (13%), Positives = 92/321 (28%), Gaps = 3/321 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + L +R++SG R++ A D+AA I+ +++ L
Sbjct: 4 TVNTNVSAMTAQRHLTNATDLLNQSLERLASGSRINSAKDDAAGLQISNRLETQMSGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ +++ +++ + ++Q E+ L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMNETTNILQRMRDLSLQSSNGSNSQAERTALQEEMAALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L SS+ I S + +
Sbjct: 124 NRIAETTSFGGRKLLNGSFASSSFQIGASSGEAVQVSLKNMRSDSLEMGGFSYVAAGKAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + + T +
Sbjct: 184 ANWQVGQGNHVLNMEYTNARGEQEVIQIKAKAGDDIEELATYINGQTDKVSASVNEEGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + N + + + V T + S
Sbjct: 244 QIFMAGKETAGTLSFSGNLANELQMNLAGYEAVDNLDISDVGGAQRAVSVIDTALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDT 320
+ + + +D
Sbjct: 304 HRAELGALQNRFNHAITNLDN 324
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 43/375 (11%), Positives = 103/375 (27%), Gaps = 11/375 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
A+ ++ A D+++ ++ + + + S
Sbjct: 13 TAQRHLTNATDLLNQSLERLA-----SGSRINSAKDDAAGLQISNRLETQMSGLDVAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + ++ + +
Sbjct: 68 ANDGISIMQTAEGAMNETTNILQRMRDLSLQSSNGSNSQAERTALQEEMAALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ S +S I + S +++ + +A
Sbjct: 128 ETTSFGGRKLLNGSFASSSFQIGASSGEAVQVSLKNMRSDSLEMGGFSYVAAGKADANWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
N + + DI AT N T + + ++
Sbjct: 188 VGQGNHVLNMEYTNARGEQEVIQIKAKAGDDIEELATYINGQTDKVSASVNEEGQLQIFM 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+T T S + + + ++ + VS IDT +K
Sbjct: 248 AGKETAGTLSFSGNLANELQMNLAGYEA------VDNLDISDVGGAQRAVSVIDTALKYV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ ++G++ +R + + + + + R+ D D A E+T+L Q QQ++
Sbjct: 302 DSHRAELGALQNRFNHAITNLDNVHENLAASNSRIKDTDYAKETTQLVKQQILQQVSTSI 361
Query: 436 LSIVNNSTARILSLF 450
L+ ++L
Sbjct: 362 LAQAKQQPNLAITLL 376
>gi|194365670|ref|YP_002028280.1| flagellin [Stenotrophomonas maltophilia R551-3]
gi|194348474|gb|ACF51597.1| flagellin domain protein [Stenotrophomonas maltophilia R551-3]
Length = 392
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 72/177 (40%), Gaps = 3/177 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L +L R+SSG R++ A D+AA +I++ +
Sbjct: 4 VINTNTMSLNAQRNLSTSGSSLATTIQRLSSGSRINSAKDDAAGLAISERFGTQIRGTDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S +A+ +++ + + ++ +D K++Q+E+TQL S++
Sbjct: 64 AIRNANDGISLAQVAEGSLTEIGNNLQRVRELSVQASNATNSASDRKALQAEVTQLVSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+A+ S FNG L S + + S D + ++
Sbjct: 124 DRVAKQSDFNGTKLLDGSFSSQLFQVGANAGQSIAIDKTIDAKAGSLGTSTFAAGAT 180
>gi|148976403|ref|ZP_01813109.1| flagellin [Vibrionales bacterium SWAT-3]
gi|145964226|gb|EDK29482.1| flagellin [Vibrionales bacterium SWAT-3]
Length = 377
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 45/365 (12%), Positives = 113/365 (30%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R++SG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLASGSKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ ++++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQSMRDLSLQSSNGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + +T
Sbjct: 124 NRIAETTSFGGNKLLNGTYGTQSFQIGADNGEAVMLNLKDMRSDNAQMVGKSYQTENAKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + Q + + S +
Sbjct: 184 KDWNVQAGSNDLKLSFTDNFGQAQEIDISAKAGDDIEELATYINGQQDSVKASVTEDGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + + + T + + + + S
Sbjct: 244 QMFAGNNKVSGDVSFSGGLAGELGIQASKEVTVDTIDVTSVGGAQESVAIIDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D + ++ + + +
Sbjct: 304 HRAELGAFQNRFDHAISNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 38/362 (10%), Positives = 91/362 (25%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + + S+I + + + N ++ +
Sbjct: 15 QRYLNNANSAQQTSMERLASGSKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + ++ + +S + + +
Sbjct: 75 AQTAEGAMNETTNILQSMRDLSLQSSNGSNSKAERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + A S
Sbjct: 135 NKLLNGTYGTQSFQIGADNGEAVMLNLKDMRSDNAQMVGKSYQTENAKDKDWNVQAGSND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
S + + + + T G +S A V S
Sbjct: 195 LKLSFTDNFGQAQEIDISAKAGDDIEELATYINGQQDSVKASVTEDGKLQMFAGNNKVSG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + + +T +E V+ ID +K + ++G+ +R
Sbjct: 255 DVSFSGGLAGELGIQASKEVTVDTIDVTSVGGAQESVAIIDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + V R+ D D A E+T+++ Q Q + L+ + LS
Sbjct: 315 FDHAISNLDNINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILAQAKQAPNSALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|238764886|ref|ZP_04625826.1| hypothetical protein ykris0001_38030 [Yersinia kristensenii ATCC
33638]
gi|238696905|gb|EEP89682.1| hypothetical protein ykris0001_38030 [Yersinia kristensenii ATCC
33638]
Length = 541
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 3/150 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIRGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQS 117
+ + G S + +++ + + ++ G SIQ EI Q
Sbjct: 61 TQAARNANDGISIAQTTEGALNEINNNLQRVRELTVQASSEGNKQTDLDSIQDEIQQRLD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAK 147
++ ++ + FNG L + A
Sbjct: 121 EIDRVSSQTQFNGVKVLASTDSLKIQVGAN 150
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/329 (10%), Positives = 81/329 (24%)
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A + G T + ++ A+ + + + + +
Sbjct: 213 ATSADVLGNLANGTAVTTTPATDVGLGASTTAAFTYNSASKSFDFSVATVASADAINYLN 272
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ V+ D ++ A + +
Sbjct: 273 PKAGDTTKATIDIGGTKQDVIIDKAGAITAADDGAALYLDTTGNLTKNSAGGPALATLDG 332
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
+PA + T+ + + + ++
Sbjct: 333 VMKNGGGTAIPATITTAGGATLTTVGGAAGTFTVDGALSAEAFGTATTGVAFTAGSTVVD 392
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
+ T + + + V TDA
Sbjct: 393 TAGKAANTFVAKDGTLTTNNQVSYFAQADGSVTNGSGKAVFKQADGTITTDAKTATAKTA 452
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ +D + + +G+I +R + + + + + R+ DAD A+E + +
Sbjct: 453 NPLETLDGAVNKIDSLRSSLGAIQNRFNSTITNLNNTVNNLTEARSRIQDADYATEVSNM 512
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q QQ LS N +LSL R
Sbjct: 513 SRAQILQQAGTSVLSQANQVPQTVLSLLR 541
>gi|149189130|ref|ZP_01867418.1| flagellin [Vibrio shilonii AK1]
gi|148837093|gb|EDL54042.1| flagellin [Vibrio shilonii AK1]
Length = 378
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 49/357 (13%), Positives = 104/357 (29%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM A +L + L +R+SSG R++ A D+AA I+ +++ L
Sbjct: 4 TVNTNVSAMMAQNQLNKASQALNQSLERLSSGYRINSAKDDAAGLQISNRLEAQISGLGV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S + A+ M++ ++ +++ + K++Q E T L +L
Sbjct: 64 AQRNANDGISIMQTAEGAMNETTAILQRMRDLSLQSANGSNSAQERKALQEEFTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G+ L G +T I + + + S
Sbjct: 124 NRIAETTSFGGKRLLNGSFGKATFQIGAQAGEAIQVELKNMRSDQLEMGGVAYRANNGVS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + D T + +
Sbjct: 184 ESWLVDSSNRSLSFSYQDAQGRTQTDTIELKVGDDIEQVATYINGQTDTISASVNGQGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + S + + V +
Sbjct: 244 QLFADSQQVTSSVTFSGSFAQALDIATQGIVTVDNLSIEAVGGAQMSVSVIDQALKYVDG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ ++G+T + L S K+ D + + +
Sbjct: 304 HRAELGAYQNRLGHTINNLANMEENLSSSNSRIKDTDYAKETTEMLKQQILQQVSTT 360
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/365 (9%), Positives = 93/365 (25%)
Query: 87 VMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
+ NK + + + + S I + + + + +
Sbjct: 13 MAQNQLNKASQALNQSLERLSSGYRINSAKDDAAGLQISNRLEAQISGLGVAQRNANDGI 72
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + + + + +S+ + +
Sbjct: 73 SIMQTAEGAMNETTAILQRMRDLSLQSANGSNSAQERKALQEEFTALNDELNRIAETTSF 132
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
A A + + + ++
Sbjct: 133 GGKRLLNGSFGKATFQIGAQAGEAIQVELKNMRSDQLEMGGVAYRANNGVSESWLVDSSN 192
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
S S S + + ++ V + T G T++ A V +
Sbjct: 193 RSLSFSYQDAQGRTQTDTIELKVGDDIEQVATYINGQTDTISASVNGQGQLQLFADSQQV 252
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + + + + + VS ID +K ++G+
Sbjct: 253 TSSVTFSGSFAQALDIATQGIVTVDNLSIEAVGGAQMSVSVIDQALKYVDGHRAELGAYQ 312
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R+ + + M + + R+ D D A E+T + Q QQ++ L+ +
Sbjct: 313 NRLGHTINNLANMEENLSSSNSRIKDTDYAKETTEMLKQQILQQVSTTILAQAKQTPNLA 372
Query: 447 LSLFR 451
L+L +
Sbjct: 373 LTLLQ 377
>gi|116563797|gb|ABJ99911.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Gallinarum]
Length = 424
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 54/424 (12%), Positives = 110/424 (25%), Gaps = 53/424 (12%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTD--------- 137
++ SIQ EI Q ++ ++ + FNG L D
Sbjct: 61 RVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGA 120
Query: 138 -------------------------LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
G A++ Y +D
Sbjct: 121 NDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDTYAAGADKYRVDI 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + + ++ + N ++ + T T + K +
Sbjct: 181 NSGAVVTDAVAPDKVYVNAANGQLTTDDAENNTAVDLFKTTKSTAGTAEAKAIAGAIKGG 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSG----------------TSGSKSPSVAAS 276
K + + +TT + + + +
Sbjct: 241 KEGDTFDYKGVTFTIDTKTGDDGNGKVSTTINGEKVTLTVADIAIGAADVNAATLQSSKN 300
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + T S N+ V + K
Sbjct: 301 VYTSVVNGQFTFDDKTKNESAKLSDLEANNAVKGESKITVNGAEYTANATGDKITLAGKT 360
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
++ N DA K + ++ ID+ + A +G+I +R +
Sbjct: 361 MFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDAVRSSLGAIQNRFDSAITNL 420
Query: 397 KLMR 400
Sbjct: 421 GNTV 424
>gi|6009841|dbj|BAA85085.1| flagellin [Escherichia coli]
gi|30059882|gb|AAP13313.1| FliC [Escherichia coli]
Length = 588
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 50/376 (13%), Positives = 97/376 (25%), Gaps = 8/376 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLASIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A G I D K+ T+
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGAN--DGQTITIDLKKIDSDTLGLNGFNVNGSGTI 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + +K + ++ + T + A
Sbjct: 182 TNKAATVSDVTRAGGTLVNGAYDIKTTNTALTTTDAFAKLNDGDVVTINNGKDTAYKYNA 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + A + + S+ A G+ +
Sbjct: 242 ATGGFTTDVSISGDPTAADATANKTARDALAASLHAEPGKTVNGSWTT---NDGTVKFDT 298
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
D S + + + K+
Sbjct: 299 DADGKISIGGVAAYVDAAGNLTTNAAGMTTQATTTDLVTAAASATGKGGSLTFGDTTYKI 358
Query: 360 AMEEMVSFIDTQIKCA 375
D
Sbjct: 359 GQGTAGVDPDDASDDV 374
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/291 (14%), Positives = 92/291 (31%)
Query: 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKK 221
+ +D++ + T + + +T K
Sbjct: 298 TDADGKISIGGVAAYVDAAGNLTTNAAGMTTQATTTDLVTAAASATGKGGSLTFGDTTYK 357
Query: 222 FKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR 281
T A++ ++ + A + T S + + ++
Sbjct: 358 IGQGTAGVDPDDASDDVLGTISYSKSVSKDVVLADTKATGNTTTVDFNSGIMTSKVSFDA 417
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
++D + A + T + + + G + D D K + +
Sbjct: 418 GTSTDTFKDADGAITKTKEYTTSYAVNKDTGEVTVADYAAVDSADKAVDDTKYKPTIGAT 477
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
V LN TD + A ++ ++ +D I +G+I +R+ +
Sbjct: 478 VNLNSAGKLTTDTTSAGTATKDPLAALDAAISSIDKFRSSLGAIQNRLDSAVTNLNNTTT 537
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 538 NLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 588
>gi|33590241|gb|AAQ22682.1| flagellin [Escherichia coli]
Length = 595
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 50/372 (13%), Positives = 97/372 (26%), Gaps = 3/372 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGSGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + S A +
Sbjct: 184 KAATISDLTAAKMDAATNTITTTNNALTASKALDQLKDGDTVTIKADAAQTATVYTYNAS 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
++ + + ++ S A + T +
Sbjct: 244 AGNFSLSNVSNNTSEKAGDVAASLLPPAGQTASGVYKAASGEVNFDVDANGKITIGGQKA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + S+ T + T A +
Sbjct: 304 YLTSDGNLTTNDAGGATAATLDGLFKKAGDGQSIGFKKTASVTMGGTTYNFKTGADADAA 363
Query: 360 AMEEMVSFIDTQ 371
VSF DT
Sbjct: 364 TANAGVSFTDTA 375
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/373 (11%), Positives = 97/373 (26%), Gaps = 2/373 (0%)
Query: 82 SKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSS 141
+ + S+ + + D+A ++
Sbjct: 223 DTVTIKADAAQTATVYTYNASAGNFSLSNVSNNTSEKAGDVAASLLPPAGQTASGVYKAA 282
Query: 142 TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
+ + V + G+ T D L ++ + I +
Sbjct: 283 SGEVNFDVDANGKITIGGQKAYLTSDGNLTTNDAGGATAATLDGLFKKAGDGQSIGFKKT 342
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
+ + Y+ A+ T A A T
Sbjct: 343 ASVTMGGTTYNFKTGADADAATANAGVSFTDTASKETVLNKVATAKQGKAAAADGDTSAT 402
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
+ SG ++ +A + + T T T Y +D
Sbjct: 403 ITYKSGVQTYQAVFAAGDGTASAKYADKADVSNATATYTDADGEMTTIGSYTTKYSIDAN 462
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM--EEMVSFIDTQIKCATAAA 379
+ + + + ++ + ++ + +D I
Sbjct: 463 NGKVTVDSGTGTGKYAPKVGAEVYVSANGTLTTDATSEGTVTKDPLKALDEAISSIDKFR 522
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G+I +R+ + + + R+ DAD A+E + +S Q QQ L+
Sbjct: 523 SSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKA 582
Query: 440 NNSTARILSLFRG 452
N ++LSL +G
Sbjct: 583 NQVPQQVLSLLQG 595
>gi|45657405|ref|YP_001491.1| flagellin protein [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|45600644|gb|AAS70128.1| flagellin protein [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
Length = 285
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 73/176 (41%), Gaps = 3/176 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ + L+ +N L+ +++S+GLR++ A D+A +++++ M++ L+
Sbjct: 5 INHNISALRTNNVLKSVNKELDKTMEKLSTGLRINRAGDDALGFAMSEKMRTQIRGLAQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ G S + + + + + +++ ++ D K +Q E+ QL ++
Sbjct: 65 ERNVMDGVSFIQVTEGTLEQVNNILQRLRELSIQTSNGIYSNEDRKLVQLEVDQLIEEVD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
I + + FN L D + + +G + + L
Sbjct: 125 RIGKSAEFNHIKPLSGDHSKQSNKPIQLQVGPNQNEKLDIFIDSMNATGLQLVANG 180
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 41/116 (35%)
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ L + + A + + M+ +DT I +G+ +R+ +
Sbjct: 165 FIDSMNATGLQLVANGKKQALSSPASANAMIGILDTAISKVNQQRADLGAYYNRLEITSQ 224
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
++ + R+ DADMA + + Q + L+ N +++ L
Sbjct: 225 GLQSSYVNMVAAESRVRDADMAEQIVDYTRNQILTKSGSAMLAQANMRPDQVVKLL 280
>gi|254522991|ref|ZP_05135046.1| flagellar protein [Stenotrophomonas sp. SKA14]
gi|219720582|gb|EED39107.1| flagellar protein [Stenotrophomonas sp. SKA14]
Length = 392
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 73/182 (40%), Gaps = 3/182 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L +L R+SSG R++ A D+AA +I++ +
Sbjct: 4 VINTNTMSLNAQRNLSTSGSSLATTIQRLSSGSRINSAKDDAAGLAISERFGTQIRGTDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S +A+ +++ + + ++ +D K++Q+E+TQL S++
Sbjct: 64 AIRNANDGISLAQVAEGSLTEIGNNLQRVRELSVQASNATNSASDRKALQAEVTQLVSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A+ S FNG L S + + S D + ++
Sbjct: 124 DRVAKQSDFNGTKLLDGSFSSQLFQVGANAGQSIAIDKTIDAKAGSLGTATFATGDTAAL 183
Query: 180 ST 181
+
Sbjct: 184 TA 185
>gi|114054882|gb|ABI50041.1| FlaA [Clostridium botulinum]
Length = 268
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 75/194 (38%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 2 INHNLNAMNAXRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ G ++I++EIT+L +++
Sbjct: 62 SRNSQDSISLIQTAEGALTETHSILQRMRELAVQGTNDTNVTAXREAIKTEITELNNEIN 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L I + + T + +
Sbjct: 122 RISQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLSIGDMSAKTLGVSGVSVSXAXXATD 181
Query: 181 TDGTERYGLLDRNH 194
+ T L +
Sbjct: 182 SIXTIDTALGKVST 195
Score = 78.2 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 38/112 (33%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + + + + IDT + + K+G+ +R+ + +
Sbjct: 157 SIGDMSAKTLGVSGVSVSXAXXATDSIXTIDTALGKVSTERAKLGANQNRLXHTINNLNT 216
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ ++ R+ DMA E S Q A + N + +L L
Sbjct: 217 SSENLQAAESRVRXVDMAKEMMAFSKNNILNQAAQAMXAQANQAPQGVLXLL 268
>gi|253681467|ref|ZP_04862264.1| flagellin [Clostridium botulinum D str. 1873]
gi|253682098|ref|ZP_04862895.1| flagellin [Clostridium botulinum D str. 1873]
gi|253561179|gb|EES90631.1| flagellin [Clostridium botulinum D str. 1873]
gi|253561810|gb|EES91262.1| flagellin [Clostridium botulinum D str. 1873]
Length = 272
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 38/242 (15%), Positives = 81/242 (33%), Gaps = 3/242 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA SI++ M+ L+
Sbjct: 3 INHNMNAMNAHRMMGQNINGAGKAMEKLSSGLRINRAGDDAAGLSISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ + D IQ E +QLQ+++
Sbjct: 63 SRNAQDGISLIQTAEGALNETHAILQRMRELSVQAANDTNKTEDRAMIQKEFSQLQTEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + + FN +N L S + + ++
Sbjct: 123 RIGKDTQFNKQNLLTGSASSIDFQVGANEKQVINVKIGDMRATALNVDAAKVSITKGANA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + S + + + A + + A
Sbjct: 183 KVAMTAIDTAINKVSDERATLGSIQNRLEHTINSDNNAAENLQAAESRIRDVDMAKEMMQ 242
Query: 241 QA 242
+
Sbjct: 243 FS 244
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/272 (12%), Positives = 67/272 (24%)
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + K ++ + + S
Sbjct: 1 MIINHNMNAMNAHRMMGQNINGAGKAMEKLSSGLRINRAGDDAAGLSISEKMRGQIRGLN 60
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
++ + A A N T +A ++ T
Sbjct: 61 QASRNAQDGISLIQTAEGALNETHAILQRMRELSVQAANDTNKTEDRAMIQKEFSQLQTE 120
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T N + + M + A + +
Sbjct: 121 ITRIGKDTQFNKQNLLTGSASSIDFQVGANEKQVINVKIGDMRATALNVDAAKVSITKGA 180
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ IDT I + +GSI +R+ + + ++ R+ D DMA E
Sbjct: 181 NAKVAMTAIDTAINKVSDERATLGSIQNRLEHTINSDNNAAENLQAAESRIRDVDMAKEM 240
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ S QQ A L+ N +L L R
Sbjct: 241 MQFSKKNILQQAAQAMLAQANQQPQGVLQLLR 272
>gi|153840001|ref|ZP_01992668.1| flagellin [Vibrio parahaemolyticus AQ3810]
gi|149746461|gb|EDM57470.1| flagellin [Vibrio parahaemolyticus AQ3810]
Length = 188
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 3/165 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 23 NVNTNVSAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 82
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 83 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 142
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQIT 164
IA +SF G L G+ + I + + +
Sbjct: 143 NRIAETTSFGGNKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDN 187
>gi|190574254|ref|YP_001972099.1| flagellin [Stenotrophomonas maltophilia K279a]
gi|190012176|emb|CAQ45799.1| putative flagellin [Stenotrophomonas maltophilia K279a]
Length = 388
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 43/288 (14%), Positives = 95/288 (32%), Gaps = 3/288 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L +L R+SSG R++ A D+AA +I++ +
Sbjct: 4 VINTNTMSLNAQRNLSTSGSSLATTIQRLSSGSRINSAKDDAAGLAISERFGTQIRGTDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S +A+ +++ + + ++ +D K++Q+E+TQL S++
Sbjct: 64 AIRNANDGISLAQVAEGSLTEIGNNLQRVRELSVQASNATNSASDRKALQAEVTQLVSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A+ S FNG L S + + + D + + +
Sbjct: 124 DRVAKQSDFNGTKLLDGSFSSQLFQVGANAGQAIAIDKTIDAKANALGGAQFVTGTIAAP 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ GT + + + V + + K + A
Sbjct: 184 TLTGTPATTADIATFTLTSAQGTVTFDALKVENTDAAGAGKALATHINAKIGETGILAEA 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
D + V ++G + + + + +
Sbjct: 244 DATGALTLTSVKDSVKADGTLVQLTSTGGVTVAGNTTVPARQYADKID 291
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 48/137 (35%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
D+ + + T+ ++A+ + ++ + +D +
Sbjct: 252 TSVKDSVKADGTLVQLTSTGGVTVAGNTTVPARQYADKIDVSTVKGAQQAMEVVDKALGA 311
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ +G++ +R ++ + + R+ D D A E+ L+ Q QQ
Sbjct: 312 INSTRADLGAVQNRFTSVVANLQTSSENLSASRSRIKDTDFAKETAELTRTQILQQAGTA 371
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 372 MLAQANQVPQGVLSLLR 388
>gi|153939755|ref|YP_001392009.1| flagellin [Clostridium botulinum F str. Langeland]
gi|168180863|ref|ZP_02615527.1| flagellin [Clostridium botulinum NCTC 2916]
gi|152935651|gb|ABS41149.1| flagellin [Clostridium botulinum F str. Langeland]
gi|182668273|gb|EDT80252.1| flagellin [Clostridium botulinum NCTC 2916]
gi|295320024|gb|ADG00402.1| flagellin [Clostridium botulinum F str. 230613]
Length = 273
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 76/194 (39%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ + +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRQMAINTGSNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D ++Q E+ +LQ+++
Sbjct: 63 SRNSQDSISLIQTAEGALNETHSILQRMRELAVQSANDTNVKVDRDNLQKEVAELQNEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L S I + G ++ + S
Sbjct: 123 RIASQTQFNTKNLLNGSAKSMVFQIGANKDQVMELTIAGMGTSALKVGSINIGSGKGAKS 182
Query: 181 TDGTERYGLLDRNH 194
G N
Sbjct: 183 ISGMIETIDNAINT 196
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 35/88 (39%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
M+ ID I + K+G+ +R+ + + ++ R+ D DMA E +
Sbjct: 186 MIETIDNAINTVSGERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFT 245
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A L+ N + +L L R
Sbjct: 246 KTNILTQAAQAMLAQANQAPQGVLQLLR 273
>gi|168188166|ref|ZP_02622801.1| flagellin [Clostridium botulinum C str. Eklund]
gi|169294007|gb|EDS76140.1| flagellin [Clostridium botulinum C str. Eklund]
Length = 261
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 37/239 (15%), Positives = 84/239 (35%), Gaps = 3/239 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNMNAMNAHRMMGQNINGAGKAMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D +++Q E+ QLQS+L
Sbjct: 63 SRNAQDGISLIQTAEGALNETHAILQRMRELAVQTANDTNVTADRENVQKEVKQLQSELS 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L I + + + ++ S
Sbjct: 123 RISEQTEFNTKKLLDGKASKINFQIGANKDQNITVKIDKMSASALKVASVNLSKSASKCS 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ + + +++ ++ S + A
Sbjct: 183 AAIETIDKAINTVSATRADLGAVQNRLEHTINSDNNASENLQAAESRIRDVDMAKEMMH 241
Score = 70.2 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 24/65 (36%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ ID I +A +G++ +R+ + + ++ R+ D DMA
Sbjct: 177 SASKCSAAIETIDKAINTVSATRADLGAVQNRLEHTINSDNNASENLQAAESRIRDVDMA 236
Query: 417 SESTR 421
E
Sbjct: 237 KEMMH 241
>gi|260776493|ref|ZP_05885388.1| flagellin B [Vibrio coralliilyticus ATCC BAA-450]
gi|260607716|gb|EEX33981.1| flagellin B [Vibrio coralliilyticus ATCC BAA-450]
Length = 377
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 45/357 (12%), Positives = 107/357 (29%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L ++ +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 NVNTNVSAMTAQRYLNGAADGMQRSMERLSSGYKINSARDDAAGLQISNRLTSQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
G S A+ M++ +++ +++ +IQ E+T L +L
Sbjct: 64 AVKNANDGISIAQTAEGAMNETTNILQRMRDLSLQSSNGSNSRSERIAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L GS + I S + + T+
Sbjct: 124 NRIAETTSFGGNKLLNGTFGSQSFQIGASSGEAVMLTMGNMRSDTSGMGGKAYIAQQGKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + V + + + +
Sbjct: 184 TDWAVSQGSTDLTLDYTDVHGEAKQLTINAKVGDDIEQLATYINGQSEDVKASVGEEGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + A + + + + V ++ S
Sbjct: 244 QLFAANNKVASDVTIGGALGGDIGFGAAENKTVSDVDVSTVAGSQMAVSVIDGALKTVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D + +++ + ++ D + ++ + +
Sbjct: 304 QRAELGAFQNRFSHAISNLDNINENVNASRSRIRDTDYAKETTQMTKSQILQQASTS 360
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 51/385 (13%), Positives = 105/385 (27%), Gaps = 12/385 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++ A D M ++++G + + +
Sbjct: 4 NVNTNVSAM-TAQRYLNGAADGMQRSMERLSSGYKINSARDDAAGLQIS-----NRLTSQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + ++ + +
Sbjct: 58 SRGLDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLSLQSSNGSNSRSERIAIQEEVT 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ + S I + + +++ + I
Sbjct: 118 ALNDELNRIAETTSFGGNKLLNGTFGSQSFQIGASSGEAVMLTMGNMRSDTSGMGGKAYI 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A A + +T + A T DI AT N + D +
Sbjct: 178 AQQGKDTDWAVSQGSTDLTLDYTDVHGEAKQLTINAKVGDDIEQLATYINGQSEDVKASV 237
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
K+ S T + + + V
Sbjct: 238 GEEGKLQLFAANNKVASDVTIGGALGGDIGFGAAENKT------VSDVDVSTVAGSQMAV 291
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
S ID +K + ++G+ +R + + + V R+ D D A E+T+++
Sbjct: 292 SVIDGALKTVDSQRAELGAFQNRFSHAISNLDNINENVNASRSRIRDTDYAKETTQMTKS 351
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q QQ + L+ S + LSL
Sbjct: 352 QILQQASTSVLAQAKQSPSAALSLL 376
>gi|261209878|ref|ZP_05924179.1| flagellin B [Vibrio sp. RC341]
gi|260841064|gb|EEX67589.1| flagellin B [Vibrio sp. RC341]
Length = 376
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 85/221 (38%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L ++ +R+SSG +++ A D+AA I+ + S + L
Sbjct: 4 NVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ G ++ ++IQ E++ L +L
Sbjct: 64 AVKNANDGISIAQTAEGAMNETTNILQRMRDLSLQSSNGSNSSSERRAIQEEVSALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + T +
Sbjct: 124 NRIAETTSFGGNKLLNGSFGNKSFQIGADSGEAVMLSMGSMRSDTQAMGGRSYRAQEGKA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ L N+ K I+ D ++T
Sbjct: 184 ADWRVGAATDLTLNYTDKQGEAREVTINAKQGDDLEELATY 224
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 45/385 (11%), Positives = 97/385 (25%), Gaps = 13/385 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++ A D M ++++G + + +
Sbjct: 4 NVNTNVSAM-TAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQIS-----NRLTSQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + ++ + + +
Sbjct: 58 SRGLDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLSLQSSNGSNSSSERRAIQEEVS 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
K ++ S + S I + S +++
Sbjct: 118 ALNDELNRIAETTSFGGNKLLNGSFGNKSFQIGADSGEAVMLSMGSMRSDTQAMGGRSYR 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A A + K + G+ +
Sbjct: 178 AQEGKAADWRVGAATDLTLNYTDKQGEAREVTINAKQGDDLEELATYINGQTDDVKASVG 237
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
T+ D+G + + +E V
Sbjct: 238 ENGKMQLFASSQKVNGDVTIGGGLGGEIGFDAGRDVT-------VANIDVSTVAGSQEAV 290
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
S +D +K + +G+ +R + + + V R+ D D A E+T ++
Sbjct: 291 SVLDGALKAVDSQRASLGAFQNRFGHAISNLDNVNENVNASRSRIRDTDYARETTAMTKA 350
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q QQ + L+ S + LSL
Sbjct: 351 QILQQASTSVLAQAKQSPSAALSLL 375
>gi|187932922|ref|YP_001885021.1| flagellin [Clostridium botulinum B str. Eklund 17B]
gi|187721075|gb|ACD22296.1| flagellin [Clostridium botulinum B str. Eklund 17B]
Length = 270
Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 76/194 (39%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNMNAMNAHRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ G D ++I++EIT+L +++
Sbjct: 63 SRNSQDSISLIQTAEGALTETHSILQRMRELAVQGTNDTNVTADREAIKTEITELNNEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L I + + T + +
Sbjct: 123 RISQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLSIGDMSAKTLGVSGVSVSDASKATD 182
Query: 181 TDGTERYGLLDRNH 194
+ T L +
Sbjct: 183 SIATIDTALGKVST 196
Score = 86.7 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 43/113 (38%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + ++ + ++ IDT + + K+G+ +R+ + +
Sbjct: 158 SIGDMSAKTLGVSGVSVSDASKATDSIATIDTALGKVSTERAKLGANQNRLEHTINNLNT 217
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA E S Q A L+ N + +L L R
Sbjct: 218 SSENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLLR 270
>gi|114054939|gb|ABI50069.1| FlaA [Clostridium botulinum]
Length = 268
Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 76/194 (39%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 2 INHNLNAMNAHRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ G D ++I++EIT+L +++
Sbjct: 62 SRNSQDSISLIQTAEGALTETHSILQRMRELAVQGTNDTNVTADREAIKTEITELNNEIN 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L I + + T + +
Sbjct: 122 RISQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLSIGDMSAKTLGVSGVSVSXAXXATX 181
Query: 181 TDGTERYGLLDRNH 194
+ T L +
Sbjct: 182 SIXTIDTALGKVST 195
Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 38/112 (33%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + + + IDT + + K+G+ +R+ + +
Sbjct: 157 SIGDMSAKTLGVSGVSVSXAXXATXSIXTIDTALGKVSTERAKLGANQNRLXHTINNLNT 216
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ ++ R+ DMA E S Q A L+ N + +L L
Sbjct: 217 SSENLQAAESRVRXVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLL 268
>gi|209695747|ref|YP_002263677.1| flagellin [Aliivibrio salmonicida LFI1238]
gi|208009700|emb|CAQ80001.1| flagellin subunit E [Aliivibrio salmonicida LFI1238]
Length = 378
Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 83/221 (37%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L ++ +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 TVNTNVSAMTAQRYLNSATSDVNQSMERLSSGSKINSAKDDAAGLQISNRLNTQTRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S + A+ M + +++S +++ D +IQ E+T L ++
Sbjct: 64 AVRNANDGISMMQTAEGAMKETSNILSRVRDLALQSSNGSNTDADRGAIQQEVTALSDEM 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + G+ + + + + N +
Sbjct: 124 NRIAETTSFGGTRLLNGNFGTKSFQVGADSGEAVMLTLNNLRADEANMGGQSFTAKEGVA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ + + + K I+ D ++T
Sbjct: 184 AGWTAGKDANMTISFTDKSGEDQSVSINAKAGDDIEEVATY 224
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/364 (9%), Positives = 94/364 (25%), Gaps = 1/364 (0%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N T+ V + + S S+I + + + N + +
Sbjct: 15 QRYLNSATSDVNQSMERLSSGSKINSAKDDAAGLQISNRLNTQTRGLDVAVRNANDGISM 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + ++ + + ++ D +
Sbjct: 75 MQTAEGAMKETSNILSRVRDLALQSSNGSNTDADRGAIQQEVTALSDEMNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A + A + N + AA T +
Sbjct: 135 TRLLNGNFGTKSFQVGADSGEAVMLTLNNLRADEANMGGQSFTAKEGVAAGWTAGKDANM 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV-DTESTTLDS 327
S + + + + + + + + V + T
Sbjct: 195 TISFTDKSGEDQSVSINAKAGDDIEEVATYINGQTDKVSASVGEDGKLQVFAAKGTIEGE 254
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+ + + ++ V+ +D +K + ++G+ +
Sbjct: 255 IAFSGALANETGMSDAVQAQKTVGNIDVTTVAGSQDAVAVVDAAMKFVDSHRSELGAAQN 314
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
R+ + + + + V ++ D D A E+T ++ Q QQ + L+ + L
Sbjct: 315 RMGHTINNLDNINENVSSAKSQIKDVDFAKETTEMTKAQILQQASSSILAQAKQAPNAAL 374
Query: 448 SLFR 451
L R
Sbjct: 375 GLLR 378
>gi|251799720|ref|YP_003014451.1| flagellin domain protein [Paenibacillus sp. JDR-2]
gi|247547346|gb|ACT04365.1| flagellin domain protein [Paenibacillus sp. JDR-2]
Length = 576
Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats.
Identities = 45/334 (13%), Positives = 105/334 (31%), Gaps = 3/334 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ L + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTLSSLNNASSAQSKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S + A+ +++ ++ ++ T TD ++Q E+ QL S++
Sbjct: 63 AKNGQDGISLIQTAEGALNETHSILQRMRELATQSANGTNTDTDRSALQDEMNQLTSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN + L + S+ S + + N T + + D S
Sbjct: 123 RIGNTTEFNTQKLLNGGIASTDGSKITQATNAKMTLANAIATGTVGAVTITVDNQTFDLS 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + +S + + A +
Sbjct: 183 GATMDTTLGSSTTAIDAEDYNEFITELGNTTSGGVKLSDLVDITKDATNHLVFTAKSAGS 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + +T + +K + + TT + ++
Sbjct: 243 TSTIQINAAAADTSLGLTTASTGSANTAKGDPTTIERAGVEATAAIGATADTTIAANSTF 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ A + D + ++
Sbjct: 303 TIQVGTDSAVTVELNKGTDPKVYDTNNTDVNVAN 336
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ K + +D I ++ K+G++ +R+ + + + + R+ D D
Sbjct: 480 ISTKEGASSAIKVLDKAINSVSSERSKLGAVQNRLEHTINNLGTASENLTAAESRIRDVD 539
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + Q A L+ N +L L R
Sbjct: 540 MAKEMMEQTKNSILAQAAQAMLAQANQQPQGVLQLLR 576
>gi|320535965|ref|ZP_08036029.1| bacterial flagellin [Treponema phagedenis F0421]
gi|320147192|gb|EFW38744.1| bacterial flagellin [Treponema phagedenis F0421]
Length = 302
Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM A + L + N +++ +++SSGLR++ A D+A+ ++++ M+S L+
Sbjct: 19 INHNMSAMFAQRTLGNTNLSVQKNMEKLSSGLRINRAGDDASGLAVSEKMRSQIRGLNQA 78
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S G S + +A++ + + DV+ I+ D IQ E++QL +++
Sbjct: 79 STNAQNGISFIQVAESYLQETTDVIQRIRELSVQSANGIYSAEDRMYIQVEVSQLVAEID 138
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
IA + FNG N L T + F N + + + +
Sbjct: 139 RIASHAQFNGMNMLTGRFARETGENTVTASMWFHIGANMDQRTRAYIGTMTAAALGV 195
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 38/98 (38%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
++ + +D IK +G+ +R+ + + + ++ R+ D
Sbjct: 205 NIDDPEKANRAIGTLDEAIKKINKQRADLGAYQNRLEYTVIGVNVAAENLQAAESRIRDV 264
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DMA E + Q Q L+ N +T +LSL R
Sbjct: 265 DMAKEMVDYTKNQILVQSGTAMLAQANQATQSVLSLLR 302
>gi|74317608|ref|YP_315348.1| flagellin FliC [Thiobacillus denitrificans ATCC 25259]
gi|74057103|gb|AAZ97543.1| flagellin FliC [Thiobacillus denitrificans ATCC 25259]
Length = 609
Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats.
Identities = 48/369 (13%), Positives = 122/369 (33%), Gaps = 3/369 (0%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN ++++A + L +L R+SSGLR++ A D+AA +I+ + L+
Sbjct: 3 AVINTNIASLNAQRNLNSSQASLATSLQRLSSGLRINSAKDDAAGLAISDRFTTQIRGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
+ G S A+ +++ + I+ +D K++ +E+ QL ++
Sbjct: 63 QAARNANDGISLAQTAEGALTETGANLQRIRELAVQSANSTNSASDRKALNAEVQQLLAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
++ + + FNG L ++ + + + +G Y V
Sbjct: 123 VQRVGTTTEFNGLKLLDGTFSNAQFQVGANANQTISVTVSGATTDLIGAYQATGNAVTSA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ ++ + + + T + + T+ + + + T
Sbjct: 183 AFDGSGFTINGVEIGVSAGTSAAGVTADSATAKATAINAKTGETGVTATASSNVTGSGPT 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ + A A T+ + ++ + A +A + G S + T +++
Sbjct: 243 ARSGLASGALLINGIAVGAIAADTNAVTQGRNAATAINAVSNQTGVSAVADATTGALTLS 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ G + ++ T + + +T +
Sbjct: 303 TADGRNIELTSSPATAAGAQAIQNATGLDVSAGSNASGNETATLTFAVANANAAGGITTA 362
Query: 359 LAMEEMVSF 367
+ ++
Sbjct: 363 NGGGDTITI 371
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 49/407 (12%), Positives = 115/407 (28%), Gaps = 8/407 (1%)
Query: 45 AYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD 104
+ + A + + G + A + A++G++ +++ I A
Sbjct: 211 SATAKATAINAKTGETGVTATASSNVTGSGPTARSGLASGALLINGIAVGAIAADTNAVT 270
Query: 105 SKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQIT 164
+ S ++ + + + S +
Sbjct: 271 QGRNAATAINAVSNQTGVSAVADATTGALTLSTADGRNIELTSSPATAAGAQAIQNATGL 330
Query: 165 TIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
+ + + T + + + +
Sbjct: 331 DVSAGSNASGNETATLTFAVANANAAGGITTANGGGDTITIGERTYQFTIDGVVAAGNVA 390
Query: 225 ATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGN 284
T + + IA + + A AA T + + S+ +++ + G
Sbjct: 391 VTLAAGA--------AETVAIANLKTAINAEYAAGRTAVQGGATTATSLVVTSSKLGTGT 442
Query: 285 SDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTL 344
I AT +I + A ++ +S ++ G
Sbjct: 443 LAIAETATNAAAIAPGAASGGTAAADGSGMTTRGTLTLSSPESFTVAGADVAYGGLGSVS 502
Query: 345 NITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVE 404
NT + ++ +D + T+ +G++ +R ++ + +
Sbjct: 503 ASLTKLNTVDISTVAGSNAALAVLDGALSQVTSQRATLGAVQNRFASTVSNLQTTAENLS 562
Query: 405 KGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+VDAD A+E+ L+ Q QQ L+ N ++LSL R
Sbjct: 563 AARSRIVDADFAAETANLTRGQILQQAGTAMLAQANQLPNQVLSLLR 609
>gi|148979884|ref|ZP_01815762.1| flagellin [Vibrionales bacterium SWAT-3]
gi|145961576|gb|EDK26877.1| flagellin [Vibrionales bacterium SWAT-3]
Length = 377
Score = 127 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 50/365 (13%), Positives = 114/365 (31%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SA+ A + L + N L +R++SG R++ A D+AA I+ +++ +
Sbjct: 4 TVNTNVSALVAQRNLSNANNMLNQSLERLASGSRINSAKDDAAGLQISNRLEAQMSGIDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ ++M +++ + +IQ EIT L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMNETTNIMQRMRDLSLQASNGSNSQSERTAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G+ L + GS++ I S + + S
Sbjct: 124 NRIAETTSFGGKKLLNGNFGSTSFQIGGSSGEAVQIGLKSMRTDDINMGGFSYVANGMAS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + Q + + T + +
Sbjct: 184 DSWAVKSNQNDMTMSFTDRFGQPQEITINAKVGDDIEELATYINGQTDLVSASVNDDGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + S ++G + T + + + T + S
Sbjct: 244 QIYMSGEDTSGTISFSGSLASELSMSAGYYESVNDINVTDVGGAQRAVSILDTAMKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + ++ L + K+ D + + +
Sbjct: 304 HRSELGAMQNRFDHAINNLENVHENLATSNSRIKDTDYAKETTQMLKQQILQQVSTTILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/364 (10%), Positives = 97/364 (26%)
Query: 87 VMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
V + + + + + S I + + + + +
Sbjct: 13 VAQRNLSNANNMLNQSLERLASGSRINSAKDDAAGLQISNRLEAQMSGIDVAVRNANDGI 72
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + + + + + +S ++ T + +
Sbjct: 73 SIMQTAEGAMNETTNIMQRMRDLSLQASNGSNSQSERTAIQEEITALNDELNRIAETTSF 132
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
ST ++ A + + +
Sbjct: 133 GGKKLLNGNFGSTSFQIGGSSGEAVQIGLKSMRTDDINMGGFSYVANGMASDSWAVKSNQ 192
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ S + + V + T G T+ A V + S
Sbjct: 193 NDMTMSFTDRFGQPQEITINAKVGDDIEELATYINGQTDLVSASVNDDGQLQIYMSGEDT 252
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
S + ++ N + + VS +DT +K + ++G++
Sbjct: 253 SGTISFSGSLASELSMSAGYYESVNDINVTDVGGAQRAVSILDTAMKYVDSHRSELGAMQ 312
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + ++ + + + R+ D D A E+T++ Q QQ++ L+ +
Sbjct: 313 NRFDHAINNLENVHENLATSNSRIKDTDYAKETTQMLKQQILQQVSTTILAQAKQAPNLA 372
Query: 447 LSLF 450
L+L
Sbjct: 373 LTLL 376
>gi|317403687|gb|EFV84175.1| flagellin domain-containing protein [Achromobacter xylosoxidans
C54]
Length = 564
Score = 127 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 49/409 (11%), Positives = 102/409 (24%), Gaps = 9/409 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN+ ++ A L L +R+SSGLR++ A D+AA +I+ S+ L+
Sbjct: 3 AVINTNYLSLVAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGMAISNRFTSNVRGLT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQ 118
S G S + ++ + ++ + Q EI Q +
Sbjct: 63 QASRNANDGISLAQTTEGAAAEITTHLQRVRELAVQAGNGSYSQEQKNSIQDEINQRLAD 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ I++ + FNG L + T + + + + + T + +
Sbjct: 123 IDRISQQTDFNGVKVLSANAQPLTLQVGANDGETITLNLSEISAKTLGLDGFNVNGSGVT 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ T + + + + T A
Sbjct: 183 ENRSATVSDLQAAGGVTVAANEWQVTTTHAAATADQVFGKLENGNKVTVGTAATGTIYTY 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
K A + + + ++ V AT I
Sbjct: 243 DAANKNFTFSDKSASNAATVTTLATSLRPATGTTTGVYTHSNGTSSTSFEVDATGAVKIN 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRH----ANTDA 354
+ ++ N+ + S+ T
Sbjct: 303 GTAAFLDAAGNLTTNSAGGTAATLDGVLQAAGGNTAAAGSSSVAINGKTYSNVAGTGVAL 362
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
+ + A +GS + +F
Sbjct: 363 QFTNTIASDALLANVKAHATANDVTVTLGSGIT--SATVNFTAGTSTNT 409
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 42/332 (12%), Positives = 89/332 (26%), Gaps = 2/332 (0%)
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
A + + + S S + + + + TT Y S
Sbjct: 233 TAATGTIYTYDAANKNFTFSDKSASNAATVTTLATSLRPATGTTTGVYTHSNGTSSTSFE 292
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
++ L A+ + T + A
Sbjct: 293 VDATGAVKINGTAAFLDAAGNLTTNSAGGTAATLDGVLQAAGGNTAAAGSSSVAINGKTY 352
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ T A + + + + + T S ++ T
Sbjct: 353 SNVAGTGVALQFTNTIASDALLANVKAHATANDVTVTLGSGITSATVNFTAGTSTNTFVD 412
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA- 360
+ T T+Y VD + + + + ++
Sbjct: 413 DKSAFTTLANYTTNYAVDPNNGKVTVKSGTGSGDYAPKIGEEAKVSSGGKLTTDATSKGS 472
Query: 361 -MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
E+ + +D G++G++ +R+ + + + + R+ DAD A+E
Sbjct: 473 LTEDPLKTLDAAFTVLNKLTGELGAVQNRLESTIANLDNVVNNLSSARSRIQDADYATEV 532
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 533 SNMSRAQILQQAGTSVLAQANQVPQTVLSLLR 564
>gi|197335551|ref|YP_002156688.1| A-type flagellin [Vibrio fischeri MJ11]
gi|197317041|gb|ACH66488.1| A-type flagellin [Vibrio fischeri MJ11]
Length = 375
Score = 127 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 3/183 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +L +R+SSGL+++ A D+AA I+ + S L
Sbjct: 4 NVNTNVSAMTAQRYLSNATNDLNSSMERLSSGLKINSAKDDAAGLQISNRLTSQTRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ D +IQ E+ L +L
Sbjct: 64 AVRNANDGISMAQTAEGAMNETTNILQRMRDLSLQSANGSNTHADRTAIQEEVVALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + N TT
Sbjct: 124 NRIAETTSFGGSRLLNGQFGTKSFQIGSDSGEAVMLTLNNMRSDTTAMGGSTYSATEGKD 183
Query: 180 STD 182
S
Sbjct: 184 SNW 186
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/362 (8%), Positives = 93/362 (25%), Gaps = 2/362 (0%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
+ T + + S +I + + + + +
Sbjct: 15 QRYLSNATNDLNSSMERLSSGLKINSAKDDAAGLQISNRLTSQTRGLDVAVRNANDGISM 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + ++ D T + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNTHADRTAIQEEVVALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
S + + + A + N + + +
Sbjct: 135 SRLLNGQFGTKSFQIGSDSGEAVMLTLNNMRSDTTAMGGSTYSATEGKDSNWKVGAENTE 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + S + + + T G +++ A V +
Sbjct: 195 LTMNFVDSKGKEQNITINAKAGDDIEEVATYINGQSDAVNASVTEDGKLQIFAAADATDI 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ + ++ T + ++ V+ +D+ ++ + +G+ +R
Sbjct: 255 EFSGSLSNELGMGNKVSDTVKS--IDVTSVGGSQKAVAILDSAMQYVDSNRADLGAFQNR 312
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + ++ + + V ++ D D A E+T ++ Q QQ + L+ + L
Sbjct: 313 FNHAINNLENINENVNASNSQIKDVDFAKETTAMTKSQILQQASSSILAQAKQAPNAALG 372
Query: 449 LF 450
L
Sbjct: 373 LL 374
>gi|37651050|emb|CAD97426.1| flagellin [Escherichia coli]
gi|37651052|emb|CAD97427.1| flagellin [Escherichia coli]
Length = 545
Score = 127 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 61/414 (14%), Positives = 117/414 (28%), Gaps = 10/414 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 2 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 62 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF---IRDDNGKVQITTIDYYLDPETVL 176
++ + FNG N L D A + D+ + ++ +
Sbjct: 122 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLSGFNVNGGGAVAN 181
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
++ D V + V T + LA + +N
Sbjct: 182 TAATKDELAAAAAAAAGTTPAVGTDGVTKYTVDAGLNKATAANVFANLADGAVVNASISN 241
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
A A + S S ++ + T +++ V+ T +
Sbjct: 242 GFGAAATDYTYNKATNDFTFNASIAAAAVGDSNSAALQSFLTPKAGDTANLSVKIGTTSV 301
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
T VD T ++ +D+ T A +
Sbjct: 302 DVVLASDGKITAKDGSELFIDVDGNLTQNNAGTVKAATLDALTKNWHTTGTPDAVSTVIT 361
Query: 357 EKLAMEEMVSFIDTQIK----CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ ++ A S+ S + + G
Sbjct: 362 TEDETTFTLAGGTDATTSGTITVANARMSAESLQSATKSTGFTVDVGTTGTSAG 415
Score = 57.8 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/202 (10%), Positives = 48/202 (23%)
Query: 218 STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASA 277
+ T N +S + +
Sbjct: 344 TKNWHTTGTPDAVSTVITTEDETTFTLAGGTDATTSGTITVANARMSAESLQSATKSTGF 403
Query: 278 TYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
T + + T++TT + +
Sbjct: 404 TVDVGTTGTSAGDIKVDSKGIVQQHTGTGFEDAYTKADGSLTTDNTTNLFLQKDGTVTNG 463
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
V ++ + TDA + + + +D I +G++ +R+ +
Sbjct: 464 SGKAVYVSADGNFTTDAETKAATTADPLKALDEAISSIDKFRSSLGAVQNRLDSAVTNLN 523
Query: 398 LMRDAVEKGVGRLVDADMASES 419
+ + R+ DAD A+E
Sbjct: 524 NTTTNLSEAQSRIQDADYATEV 545
>gi|197335226|ref|YP_002156687.1| A-type flagellin [Vibrio fischeri MJ11]
gi|197316716|gb|ACH66163.1| A-type flagellin [Vibrio fischeri MJ11]
Length = 378
Score = 127 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 84/221 (38%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 TVNTNVSAMTAQRYLNSATDGVNQSMERLSSGSKINSAKDDAAGLQISNRLNTQTRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S + A+ M + +++S +++ D ++IQ E+T L ++
Sbjct: 64 AVRNANDGISMMQTAEGAMKETSNILSRVRDLALQSSNGSNTDADRQAIQQEVTALSDEM 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + G+ + + + + N +
Sbjct: 124 NRIAETTSFGGTRLLNGNFGTKSFQVGADSGEAVMLTLNNLRADEANMGGKTFTASEGVA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ + + K + +I+ D ++T
Sbjct: 184 AGWTAGKDANMTITIADKNGEEQAIEINAKAGDDIEEVATY 224
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/364 (9%), Positives = 87/364 (23%), Gaps = 1/364 (0%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N T GV + + S S+I + + + N + +
Sbjct: 15 QRYLNSATDGVNQSMERLSSGSKINSAKDDAAGLQISNRLNTQTRGLDVAVRNANDGISM 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + ++ + + ++ D +
Sbjct: 75 MQTAEGAMKETSNILSRVRDLALQSSNGSNTDADRQAIQQEVTALSDEMNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWL-KAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
+ + A + A + N D+A A +
Sbjct: 135 TRLLNGNFGTKSFQVGADSGEAVMLTLNNLRADEANMGGKTFTASEGVAAGWTAGKDANM 194
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
+ + + N+ + + S +
Sbjct: 195 TITIADKNGEEQAIEINAKAGDDIEEVATYINGQTDKVSASVGEDGKLQVFAAKDVAEGE 254
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+ + V+ +D +K + ++G+ +
Sbjct: 255 ISFSGALAKETGMADAEVANKTVGNIDVTTVAGSQNAVAVVDAAMKFVDSHRSELGAAQN 314
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
R+ + + + V ++ D D A E+T ++ Q QQ + L+ + L
Sbjct: 315 RMGHTISNLDNINENVSASKSQIKDVDFAKETTEMTKSQILQQASSSILAQAKQAPNAAL 374
Query: 448 SLFR 451
L R
Sbjct: 375 GLLR 378
>gi|59712470|ref|YP_205246.1| flagellin [Vibrio fischeri ES114]
gi|46394807|gb|AAS91572.1| flagellin subunit D [Vibrio fischeri ES114]
gi|59480571|gb|AAW86358.1| Flagellin FlaD [Vibrio fischeri ES114]
Length = 375
Score = 127 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 3/183 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +L +R+SSGL+++ A D+AA I+ + S L
Sbjct: 4 NVNTNVSAMTAQRYLSNATNDLNSSMERLSSGLKINSAKDDAAGLQISNRLTSQTRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ D +IQ E+ L +L
Sbjct: 64 AVRNANDGISMAQTAEGAMNETTNILQRMRDLSLQSANGSNTHADRTAIQEEVVALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + N TT
Sbjct: 124 NRIAETTSFGGSRLLNGQFGTKSFQIGSDSGEAVMLTLNNMRSDTTAMGGSTYSATEGKD 183
Query: 180 STD 182
S
Sbjct: 184 SNW 186
Score = 86.3 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 30/362 (8%), Positives = 93/362 (25%), Gaps = 2/362 (0%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
+ T + + S +I + + + + +
Sbjct: 15 QRYLSNATNDLNSSMERLSSGLKINSAKDDAAGLQISNRLTSQTRGLDVAVRNANDGISM 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + ++ D T + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNTHADRTAIQEEVVALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
S + + + A + N + + +
Sbjct: 135 SRLLNGQFGTKSFQIGSDSGEAVMLTLNNMRSDTTAMGGSTYSATEGKDSNWKVGAENTE 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + S + + + T G +++ A V +
Sbjct: 195 LTMNFVDSKGEEQNITINAKAGDDIEEVATYINGQSDAVNASVTEDGKLQIFAAADATDI 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ + ++ T + ++ V+ +D+ ++ + +G+ +R
Sbjct: 255 EFSGSLSNELGMGNKVSDTVKS--IDVTTVGGSQKAVAILDSAMQYVDSNRADLGAFQNR 312
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + ++ + + V ++ D D A E+T ++ Q QQ + L+ + L
Sbjct: 313 FNHAINNLENINENVNASNSQIKDVDFAKETTAMTKSQILQQASSSILAQAKQAPNAALG 372
Query: 449 LF 450
L
Sbjct: 373 LL 374
>gi|323495367|ref|ZP_08100444.1| flagellin [Vibrio brasiliensis LMG 20546]
gi|323310290|gb|EGA63477.1| flagellin [Vibrio brasiliensis LMG 20546]
Length = 377
Score = 127 bits (317), Expect = 5e-27, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 69/183 (37%), Gaps = 3/183 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNSASNAQQASMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ EIT L +L
Sbjct: 64 AVRNANDGISMAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + N +
Sbjct: 124 NRIAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLTMNNMRSDNAMMGGNSYVAANGQG 183
Query: 180 STD 182
Sbjct: 184 KDW 186
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/362 (9%), Positives = 90/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNSASNAQQASMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISM 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + N + T G +
Sbjct: 135 NKLLNGTFATKSFQIGADNGEAVMLTMNNMRSDNAMMGGNSYVAANGQGKDWTVQGGAND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + + T G T+ A V
Sbjct: 195 LTITLTDKFGQEQNVAINAKAGDDIEELATYINGQTDLVKASVDQDGKLQLFTDNNRVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T +E V+ +D +K + ++G+ +R
Sbjct: 255 AAAFGGSLAGELGIGEAKAVTVDTIDVTSVGGAQESVAIVDAALKFVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + + V R+ D D A E+T L+ Q Q + L+ + L
Sbjct: 315 FNHAINNLDNINENVNASKSRIKDTDFAKETTALTKSQILTQASSSVLAQAKQAPNSALG 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|260774947|ref|ZP_05883848.1| flagellin protein FlaD [Vibrio coralliilyticus ATCC BAA-450]
gi|260609202|gb|EEX35360.1| flagellin protein FlaD [Vibrio coralliilyticus ATCC BAA-450]
Length = 377
Score = 127 bits (317), Expect = 5e-27, Method: Composition-based stats.
Identities = 46/365 (12%), Positives = 107/365 (29%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +AM+A + L + + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVAAMTAQRYLNSASNAQQSSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ EIT L +L
Sbjct: 64 AVRNANDGISMAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + N ++
Sbjct: 124 NRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLNNMRSDNSMMGGNSYSAANAKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ V + + T +
Sbjct: 184 KDWAVQAGSNDLTIALTDVFGEQQNITINAKEGDDIEELATYINGQTDMVKASVGDDGNL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + A S T + + + + + S
Sbjct: 244 QVFTDNNRVTGDVTFGGALAGELSMGPAQAVTVDTIDVTTVAGSQEAVAIVDSALKFVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D L + + + +
Sbjct: 304 HRAELGAFQNRFSHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/362 (10%), Positives = 92/362 (25%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNSASNAQQSSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISM 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + N + A S
Sbjct: 135 NKLLNGTFSTKSFQIGADNGEAVMLTLNNMRSDNSMMGGNSYSAANAKDKDWAVQAGSND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + + T G T+ A VG+ +
Sbjct: 195 LTIALTDVFGEQQNITINAKEGDDIEELATYINGQTDMVKASVGDDGNLQVFTDNNRVTG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T +E V+ +D+ +K + ++G+ +R
Sbjct: 255 DVTFGGALAGELSMGPAQAVTVDTIDVTTVAGSQEAVAIVDSALKFVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T L+ Q Q + L+ + L
Sbjct: 315 FSHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLAQAKQAPNSALG 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|2276416|gb|AAC09389.1| flagellin [Pseudomonas aeruginosa]
Length = 259
Score = 127 bits (317), Expect = 5e-27, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 59/210 (28%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A T+ + + + + A+A N + T
Sbjct: 50 ATASGTVDIAIGITGGSAVNVKVDMKGNETAEQAAAKIAAAVNDANVGIGAFSDGDTISY 109
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
T S + + +
Sbjct: 110 VSKAGKDGSGAITSAVSGVVIADTGSTGVGTAAGVAPSATAFAKTNDTVAKIDISTAKGA 169
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ V ID IK A +G++ +R + +K + + V GR+ D D A+E+
Sbjct: 170 QSAVLVIDEAIKQIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDFAAETAN 229
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ L+ N +LSL R
Sbjct: 230 LTKNQVLQQAGTAILAQANQLPQSVLSLLR 259
>gi|254508441|ref|ZP_05120561.1| flagellin C [Vibrio parahaemolyticus 16]
gi|219548651|gb|EED25656.1| flagellin C [Vibrio parahaemolyticus 16]
Length = 377
Score = 127 bits (317), Expect = 5e-27, Method: Composition-based stats.
Identities = 42/365 (11%), Positives = 103/365 (28%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +AM+A + L + + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVAAMTAQRHLNAASNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ EIT L +L
Sbjct: 64 AVRNANDGISMAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + T+
Sbjct: 124 NRIAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLTMKNMRSDNTMMGGNSYVAANGQD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + T +
Sbjct: 184 ADWAVQSGANDLTITLTDKFGEEQNIEINAKAGDDIEELATYINGQTDFVKASVDEDGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + + + S
Sbjct: 244 QLFTDNNKVEGAATFGGSLAGDLDIGAAQAVTVDTIDVRSVGGAQQSVAIVDAALKFVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D L ++ + +
Sbjct: 304 HRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKSQILTQASSSVLA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 33/362 (9%), Positives = 88/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRHLNAASNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISM 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + A +
Sbjct: 135 NKLLNGTFATKSFQIGADNGEAVMLTMKNMRSDNTMMGGNSYVAANGQDADWAVQSGAND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + + T G T+ A V
Sbjct: 195 LTITLTDKFGEEQNIEINAKAGDDIEELATYINGQTDFVKASVDEDGQLQLFTDNNKVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T ++ V+ +D +K + ++G+ +R
Sbjct: 255 AATFGGSLAGDLDIGAAQAVTVDTIDVRSVGGAQQSVAIVDAALKFVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + + V R+ D D A E+T L+ Q Q + L+ + L
Sbjct: 315 FNHAINNLDNINENVNASKSRIKDTDFAKETTALTKSQILTQASSSVLAQAKQAPNSALG 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|114054830|gb|ABI50015.1| FlaA [Clostridium botulinum]
Length = 270
Score = 127 bits (317), Expect = 5e-27, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 76/194 (39%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ + +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 1 INHNLNAMNAHRQMAINTGSNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D ++Q E+ +LQ+++
Sbjct: 61 SRNSQDSISLIQTAEGALNETHSILQRMRELAVQSANDTNVKVDRDNLQKEVAELQNEIN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L S I + G ++ + S
Sbjct: 121 RIASQTQFNTKNLLNGSAKSMVFQIGANKDQVMELTIAGMGTSALKVGSINIGSGKGAKS 180
Query: 181 TDGTERYGLLDRNH 194
G N
Sbjct: 181 ISGMIETIDNAINT 194
Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 34/86 (39%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
M+ ID I + K+G+ +R+ + + ++ R+ D DMA E +
Sbjct: 184 MIETIDNAINTVSGERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFT 243
Query: 424 ALQTQQQLAVQALSIVNNSTARILSL 449
Q A L+ N + +L L
Sbjct: 244 KTNILTQAAQAMLAQANQAPQGVLQL 269
>gi|114054815|gb|ABI50008.1| FlaA [Clostridium botulinum]
Length = 269
Score = 127 bits (317), Expect = 5e-27, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 76/194 (39%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ + +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 1 INHNLNAMNAHRQMAINTGSNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D ++Q E+ +LQ+++
Sbjct: 61 SRNSQDSISLIQTAEGALNETHSILQRMRELAVQSANDTNVKVDRDNLQKEVAELQNEIN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L S I + G ++ + S
Sbjct: 121 RIASQTQFNTKNLLNGSAKSMVFQIGANKDQVMELTIAGMGTSALKVGSINIGSGKGAKS 180
Query: 181 TDGTERYGLLDRNH 194
G N
Sbjct: 181 ISGMIETIDNAINT 194
Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 34/86 (39%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
M+ ID I + K+G+ +R+ + + ++ R+ D DMA E +
Sbjct: 184 MIETIDNAINTVSGERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFT 243
Query: 424 ALQTQQQLAVQALSIVNNSTARILSL 449
Q A L+ N + +L L
Sbjct: 244 KTNILTQAAQAMLAQANQAPQGVLQL 269
>gi|114054876|gb|ABI50038.1| FlaA [Clostridium botulinum]
Length = 266
Score = 127 bits (317), Expect = 5e-27, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 76/194 (39%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 1 INHNLNAMNARRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ G D ++I++EIT+L +++
Sbjct: 61 SRNSQDSISLIQTAEGALTETHSILQRMRELAVQGTNDTNVTADREAIKTEITELNNEIN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L I + + T + +
Sbjct: 121 RISQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLSIGDMSAKTLGVSGVSVSXAXXATD 180
Query: 181 TDGTERYGLLDRNH 194
+ T L +
Sbjct: 181 SIXTIDTALGKVST 194
Score = 77.5 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 38/111 (34%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + + + + IDT + + K+G+ +R+ + +
Sbjct: 156 SIGDMSAKTLGVSGVSVSXAXXATDSIXTIDTALGKVSTERAKLGANQNRLXHTINNLNT 215
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
+ ++ R+ DMA E S Q A + N + +L L
Sbjct: 216 SSENLQAAESRVRXVDMAKEMMAFSKNNILNQAAQAMXAQANQAPQGVLQL 266
>gi|260772283|ref|ZP_05881199.1| flagellin protein FlaD [Vibrio metschnikovii CIP 69.14]
gi|260611422|gb|EEX36625.1| flagellin protein FlaD [Vibrio metschnikovii CIP 69.14]
Length = 377
Score = 127 bits (317), Expect = 5e-27, Method: Composition-based stats.
Identities = 47/368 (12%), Positives = 106/368 (28%), Gaps = 3/368 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNSATSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISMAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + +
Sbjct: 124 NRIAETTSFAGNRLLNGTFQTKSFQIGSQSGEAVMLTMKDMRSDNAMMGGTSYVAATEAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + T
Sbjct: 184 KDWTVSDGSNDLTLTLTDINGDEQIVNITAKVGDDIEEVATYINGQTDLVQASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + A +G T + + V + S
Sbjct: 244 QVFTGNNDVTGAVAFSGALATELDMQAGQAITIDTIDVTTVGGAQKSVSVVDAALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + G+ +D + +++ K K+ D L ++ + + +
Sbjct: 304 HRAELGAFQNRFGHAINNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLA 363
Query: 360 AMEEMVSF 367
++ +
Sbjct: 364 QAKQAPTA 371
Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 37/362 (10%), Positives = 93/362 (25%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N T+ + + S +I + + + N ++ +
Sbjct: 15 QRYLNSATSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISM 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDELNRIAETTSFAG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + + + A + + T S S
Sbjct: 135 NRLLNGTFQTKSFQIGSQSGEAVMLTMKDMRSDNAMMGGTSYVAATEADKDWTVSDGSND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ ++ N V + T G T+ A V +
Sbjct: 195 LTLTLTDINGDEQIVNITAKVGDDIEEVATYINGQTDLVQASVNEKGQLQVFTGNNDVTG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ + +T ++ VS +D +K + ++G+ +R
Sbjct: 255 AVAFSGALATELDMQAGQAITIDTIDVTTVGGAQKSVSVVDAALKYVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + V R+ D D A E+T L+ Q Q + L+ + L+
Sbjct: 315 FGHAINNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPTAALA 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|306819586|ref|ZP_07453287.1| flagellin protein [Mobiluncus mulieris ATCC 35239]
gi|304647637|gb|EFM44961.1| flagellin protein [Mobiluncus mulieris ATCC 35239]
Length = 476
Score = 127 bits (317), Expect = 5e-27, Method: Composition-based stats.
Identities = 33/280 (11%), Positives = 76/280 (27%)
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+T+ + T + + + S +
Sbjct: 197 GKTLEGKTFTLEIDGKSFTTEKLTADSTAENAAQTLNEMISKSTLAGQYEVTQKGGKFTV 256
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
A + + K + + ++ I +
Sbjct: 257 EAKGEAKNKYVDVKLSTDAEVKPTGNPAVANPVLYEGKIGVNSGGDFEFEVTDTLIKFKR 316
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
T +I D + S + K+ G + T++ N
Sbjct: 317 TDGKTINVDLAHAMSEHVPGAAAGNPDQAGKLVALTAKNAAGVAIDGTAGKEWYQTKNMN 376
Query: 352 TDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ + + ++ +D +I+ + A +G++ +R + + + + R+
Sbjct: 377 ALTVRDHDSAQNLIRVLDQKIQSVSTARSNLGAVQNRFEHTITNLNVAVENLAASESRVR 436
Query: 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D DMA E + + Q Q L+ N +LSL R
Sbjct: 437 DTDMAQEMMQFTRNQILSQAGTSMLAQANQVPQGVLSLLR 476
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 31/89 (34%), Gaps = 3/89 (3%)
Query: 56 DNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEI 112
G G S V A+ +++ ++ ++ +I +E+
Sbjct: 1 QVGGNRQAVRNAQDGISLVQTAEGALNEVHSILQRMRVLAVQGATDSNSSEARNNINTEL 60
Query: 113 TQLQSQLRDIARGSSFNGENWLRTDLGSS 141
QL+ +L I + ++FNG L
Sbjct: 61 NQLREELERIGKVTNFNGTQLLDGSASEQ 89
>gi|15831916|ref|NP_310689.1| flagellin [Escherichia coli O157:H7 str. Sakai]
gi|168751850|ref|ZP_02776872.1| flagellin [Escherichia coli O157:H7 str. EC4113]
gi|168758235|ref|ZP_02783242.1| flagellin [Escherichia coli O157:H7 str. EC4401]
gi|168764454|ref|ZP_02789461.1| flagellin [Escherichia coli O157:H7 str. EC4501]
gi|168771528|ref|ZP_02796535.1| flagellin [Escherichia coli O157:H7 str. EC4486]
gi|168777348|ref|ZP_02802355.1| flagellin [Escherichia coli O157:H7 str. EC4196]
gi|168783318|ref|ZP_02808325.1| flagellin [Escherichia coli O157:H7 str. EC4076]
gi|168790320|ref|ZP_02815327.1| flagellin [Escherichia coli O157:H7 str. EC869]
gi|168802268|ref|ZP_02827275.1| flagellin [Escherichia coli O157:H7 str. EC508]
gi|195939228|ref|ZP_03084610.1| flagellin [Escherichia coli O157:H7 str. EC4024]
gi|208810749|ref|ZP_03252625.1| flagellin [Escherichia coli O157:H7 str. EC4206]
gi|208816605|ref|ZP_03257725.1| flagellin [Escherichia coli O157:H7 str. EC4045]
gi|208821489|ref|ZP_03261809.1| flagellin [Escherichia coli O157:H7 str. EC4042]
gi|209399146|ref|YP_002271038.1| flagellin [Escherichia coli O157:H7 str. EC4115]
gi|217328884|ref|ZP_03444965.1| flagellin [Escherichia coli O157:H7 str. TW14588]
gi|254793574|ref|YP_003078411.1| flagellin [Escherichia coli O157:H7 str. TW14359]
gi|256017879|ref|ZP_05431744.1| flagellin [Shigella sp. D9]
gi|261227581|ref|ZP_05941862.1| flagellin [Escherichia coli O157:H7 str. FRIK2000]
gi|261255811|ref|ZP_05948344.1| flagellin [Escherichia coli O157:H7 str. FRIK966]
gi|291283100|ref|YP_003499918.1| Flagellin [Escherichia coli O55:H7 str. CB9615]
gi|332278905|ref|ZP_08391318.1| flagellin [Shigella sp. D9]
gi|8071774|gb|AAF71893.1| flagellin [Escherichia coli]
gi|8071776|gb|AAF71894.1| flagellin [Escherichia coli]
gi|8071778|gb|AAF71895.1| flagellin [Escherichia coli]
gi|8071792|gb|AAF71902.1| flagellin [Escherichia coli]
gi|13362130|dbj|BAB36085.1| flagellin [Escherichia coli O157:H7 str. Sakai]
gi|33590229|gb|AAQ22676.1| flagellin [Escherichia coli]
gi|86604412|emb|CAJ76126.1| flagellin [Escherichia coli O157:H7]
gi|86604414|emb|CAJ76127.1| flagellin [Escherichia coli O157:H7]
gi|86604416|emb|CAJ76128.1| flagellin [Escherichia coli O157:H7]
gi|168983585|dbj|BAG11671.1| flagellin [Escherichia coli O55:H7]
gi|168983587|dbj|BAG11672.1| flagellin [Escherichia coli O55:H7]
gi|168983589|dbj|BAG11673.1| flagellin [Escherichia coli O55:H7]
gi|168983591|dbj|BAG11674.1| flagellin [Escherichia coli O55:H7]
gi|168983593|dbj|BAG11675.1| flagellin [Escherichia coli O55:H7]
gi|168983595|dbj|BAG11676.1| flagellin [Escherichia coli O55:H7]
gi|168983597|dbj|BAG11677.1| flagellin [Escherichia coli O55:H7]
gi|168983599|dbj|BAG11678.1| flagellin [Escherichia coli O55:H7]
gi|187767376|gb|EDU31220.1| flagellin [Escherichia coli O157:H7 str. EC4196]
gi|188014156|gb|EDU52278.1| flagellin [Escherichia coli O157:H7 str. EC4113]
gi|188999278|gb|EDU68264.1| flagellin [Escherichia coli O157:H7 str. EC4076]
gi|189354922|gb|EDU73341.1| flagellin [Escherichia coli O157:H7 str. EC4401]
gi|189359718|gb|EDU78137.1| flagellin [Escherichia coli O157:H7 str. EC4486]
gi|189365565|gb|EDU83981.1| flagellin [Escherichia coli O157:H7 str. EC4501]
gi|189370206|gb|EDU88622.1| flagellin [Escherichia coli O157:H7 str. EC869]
gi|189375731|gb|EDU94147.1| flagellin [Escherichia coli O157:H7 str. EC508]
gi|208725265|gb|EDZ74972.1| flagellin [Escherichia coli O157:H7 str. EC4206]
gi|208730948|gb|EDZ79637.1| flagellin [Escherichia coli O157:H7 str. EC4045]
gi|208741612|gb|EDZ89294.1| flagellin [Escherichia coli O157:H7 str. EC4042]
gi|209160546|gb|ACI37979.1| flagellin [Escherichia coli O157:H7 str. EC4115]
gi|217318231|gb|EEC26658.1| flagellin [Escherichia coli O157:H7 str. TW14588]
gi|254592974|gb|ACT72335.1| flagellar filament structural protein (flagellin) [Escherichia coli
O157:H7 str. TW14359]
gi|290762973|gb|ADD56934.1| Flagellin [Escherichia coli O55:H7 str. CB9615]
gi|320191899|gb|EFW66546.1| Flagellar biosynthesis protein FliC [Escherichia coli O157:H7 str.
EC1212]
gi|320198617|gb|EFW73217.1| Flagellar biosynthesis protein FliC [Escherichia coli EC4100B]
gi|320641772|gb|EFX11160.1| flagellin [Escherichia coli O157:H7 str. G5101]
gi|320647131|gb|EFX15964.1| flagellin [Escherichia coli O157:H- str. 493-89]
gi|320652415|gb|EFX20713.1| flagellin [Escherichia coli O157:H- str. H 2687]
gi|320658017|gb|EFX25779.1| flagellin [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320658589|gb|EFX26283.1| flagellin [Escherichia coli O55:H7 str. USDA 5905]
gi|320668487|gb|EFX35314.1| flagellin [Escherichia coli O157:H7 str. LSU-61]
gi|324118977|gb|EGC12866.1| flagellin [Escherichia coli E1167]
gi|326342333|gb|EGD66114.1| Flagellar biosynthesis protein FliC [Escherichia coli O157:H7 str.
1044]
gi|326344838|gb|EGD68585.1| Flagellar biosynthesis protein FliC [Escherichia coli O157:H7 str.
1125]
gi|332101257|gb|EGJ04603.1| flagellin [Shigella sp. D9]
Length = 585
Score = 127 bits (317), Expect = 5e-27, Method: Composition-based stats.
Identities = 42/253 (16%), Positives = 77/253 (30%), Gaps = 3/253 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGETITIDLKKIDSDTLGLNGFNVNGKGTITN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
LK + + + T G +
Sbjct: 184 KAATVSDLTSAGAKLNTTTGLYDLKTENTLLTTDAAFDKLGNGDKVTVGGVDYTYNAKSG 243
Query: 240 DQAKGIATIPVPL 252
D +T +
Sbjct: 244 DFTTTKSTAGTGV 256
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/296 (13%), Positives = 79/296 (26%)
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
D + + D + K + + L D +
Sbjct: 290 TKDGTVSFETDSAGNITIGGSQAYVDDAGNLTTNNAGSAAKADMKALLKAASEGSDGASL 349
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ A V + + TS S S
Sbjct: 350 TFNGTEYTIAKATPATTTPVAPLIPGGITYQATVSKDVVLSETKAAAATSSITFNSGVLS 409
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
T + + + TV+ N T + +
Sbjct: 410 KTIGFTAGESSDAAKSYVDDKGGITNVADYTVSYSVNKDNGSVTVAGYASATDTNKDYAP 469
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + V +N T+ + A ++ +D I +G+I +R+ +
Sbjct: 470 AIGTAVNVNSAGKITTETTSAGSATTNPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNL 529
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 530 NNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 585
>gi|114054824|gb|ABI50012.1| FlaA [Clostridium botulinum]
Length = 269
Score = 127 bits (317), Expect = 5e-27, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 76/194 (39%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ + +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRQMAINTGSNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D ++Q E+ +LQ+++
Sbjct: 63 SRNSQDSISLIQTAEGALNETHSILQRMRELAVQSANDTNVKVDRDNLQKEVAELQNEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L S I + G ++ + S
Sbjct: 123 RIASQTQFNTKNLLNGSAKSMVFQIGANKDQVMELTIAGMGTSALKVGSINIGSGKGAKS 182
Query: 181 TDGTERYGLLDRNH 194
G N
Sbjct: 183 ISGMIETIDNAINT 196
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 33/84 (39%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
M+ ID I + K+G+ +R+ + + ++ R+ D DMA E +
Sbjct: 186 MIETIDNAINTVSGERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFT 245
Query: 424 ALQTQQQLAVQALSIVNNSTARIL 447
Q A L+ N + +L
Sbjct: 246 KTNILTQAAQAMLAQANQAPQGVL 269
>gi|8071790|gb|AAF71901.1| flagellin [Escherichia coli]
Length = 585
Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats.
Identities = 42/254 (16%), Positives = 77/254 (30%), Gaps = 3/254 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGETITIDLKKIDSDTLGLNGFNVNGKGTITN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
LK + + + T G +
Sbjct: 184 KAATVSDLTSAGAKLNTTTGLYDLKTENTLLTTDAAFDKLGNGDKVTVGGVDYTYNAKSG 243
Query: 240 DQAKGIATIPVPLP 253
D +T +
Sbjct: 244 DFTTTKSTAGTGVN 257
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 41/296 (13%), Positives = 79/296 (26%)
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
D + + D + K + + L D +
Sbjct: 290 TKDGTVSFETDSAGNITIGGSQAYVDDAGNLTTNNAGSAAKADMKALLKAASEGSDGASL 349
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ A V + + TS S S
Sbjct: 350 TFNGTEYTIAKATPATTTPVAPLIPGGITYQATVSKDVVLSETKAAAATSSITFNSGVLS 409
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
T + + + TV+ N T + +
Sbjct: 410 KTIGFTAGESSDAAKSYVDDKGGITNVADYTVSYSVNKDNGSVTVAGYASATDTNKDYAP 469
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + V +N T+ + A ++ +D I +G+I +R+ +
Sbjct: 470 AIGTAVNVNSAGKITTETTSAGSATTNPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNL 529
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 530 NNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 585
>gi|298507067|gb|ADI85790.1| flagellin FliC [Geobacter sulfurreducens KN400]
Length = 276
Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 69/155 (44%), Gaps = 3/155 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++A + L L +R+SSG R++ A D+AA +I++ M++ +++
Sbjct: 3 LTVNTNVASINAQRNLNVTQLALGKSLERLSSGYRINRAGDDAAGLAISENMRAQIRSMN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S V A+ +++ +++ ++ T G I SE L+ +
Sbjct: 63 QAVRNANDGVSLVQTAEGALNEVSNILVRMRELATQGATGTVSSEQRGYIDSEFQALKGE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+ IA S FNG L + + + +
Sbjct: 123 IDRIASSSEFNGAKLLDGTSATYSFQVGSRNTAND 157
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
++ A + + ID+ IK ++ G +G+I +R+ + +++ + + R+ D D+
Sbjct: 181 SDGAAAKAALDSIDSAIKNVSSIRGTLGAIQNRLQSTINNLQVSVENLSAAESRIRDVDV 240
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ASE+ L+ Q Q L+ N + LSL R
Sbjct: 241 ASETAALTRAQILTQAGTAILAQANQTPQSALSLLR 276
>gi|260876885|ref|ZP_05889240.1| A-type flagellin [Vibrio parahaemolyticus AN-5034]
gi|308091432|gb|EFO41127.1| A-type flagellin [Vibrio parahaemolyticus AN-5034]
Length = 221
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 74/187 (39%), Gaps = 3/187 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + + + +
Sbjct: 124 NRIAETTSFGGNKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQAESGKG 183
Query: 180 STDGTER 186
+
Sbjct: 184 KDWNVAQ 190
>gi|54308106|ref|YP_129126.1| flagellin [Photobacterium profundum SS9]
gi|46912532|emb|CAG19324.1| putative flagellin [Photobacterium profundum SS9]
Length = 393
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 70/180 (38%), Gaps = 3/180 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L +R+S+G +++ A D+AA I+ + + + L
Sbjct: 4 TVNTNVSAMTAQRYLGQATEATGKSMERLSTGSKINSAKDDAAGLQISNRLMTQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQL 119
G S A+ M + ++ +++ + G D K+IQ E+T L+ ++
Sbjct: 64 AVRNANDGISMAQTAEGSMQETTSILQRMRDLSLQSSNGSNSSDDRKAIQQEVTALKDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G + GS + + + + +
Sbjct: 124 NRIAETTSFGGTKLMNGTFGSRSIQVGADSGEAVQLTLTDTRADAMGSKVVQGGGAADAN 183
>gi|323496567|ref|ZP_08101621.1| flagellin [Vibrio sinaloensis DSM 21326]
gi|323318411|gb|EGA71368.1| flagellin [Vibrio sinaloensis DSM 21326]
Length = 377
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 44/321 (13%), Positives = 93/321 (28%), Gaps = 3/321 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L L +R++SG R++ A D+AA I+ +++ L
Sbjct: 4 TVNTNVSAMTAQRHLTTATDLLNQSLERLASGSRINSAKDDAAGLQISNRLETQMSGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M + +++ +++ + ++Q E+T L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMQETTNILQRMRDLSLQSSNGSNSQAERTALQEEMTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L SS+ I S + + S
Sbjct: 124 NRIAETTSFGGRKLLNGSFASSSFQIGASSGEAVQVSLKNMRSDSIDMGGFSYIAAGKAS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + + T +
Sbjct: 184 DSWQVSQGNHVLNMEFTNALGEQESIQVKAKIGDDIEELATYINGQTDKVSASVNEEGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + N + + + V T + S
Sbjct: 244 QIFMAGKESAGTISFSGSLANELQMNLAGYEAVDNIDISDVGGAQRAVSVIDTALGYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDT 320
+ + + +D
Sbjct: 304 HRAELGALQNRFNHAITNLDN 324
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/375 (11%), Positives = 104/375 (27%), Gaps = 11/375 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
A+ ++ A D+++ ++ + + + S
Sbjct: 13 TAQRHLTTATDLLNQSLERLA-----SGSRINSAKDDAAGLQISNRLETQMSGLDVAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + ++ + +
Sbjct: 68 ANDGISIMQTAEGAMQETTNILQRMRDLSLQSSNGSNSQAERTALQEEMTALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ S +S I + S +++ + IA
Sbjct: 128 ETTSFGGRKLLNGSFASSSFQIGASSGEAVQVSLKNMRSDSIDMGGFSYIAAGKASDSWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
+ N + + S DI AT N T + + ++
Sbjct: 188 VSQGNHVLNMEFTNALGEQESIQVKAKIGDDIEELATYINGQTDKVSASVNEEGQLQIFM 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
++ T S + + + ++ + VS IDT +
Sbjct: 248 AGKESAGTISFSGSLANELQMNLAGYEA------VDNIDISDVGGAQRAVSVIDTALGYV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ ++G++ +R + + + + + R+ D D A E+T+L Q QQ++
Sbjct: 302 DSHRAELGALQNRFNHAITNLDNVHENLAASNSRIKDTDYAKETTQLVKQQILQQVSTSI 361
Query: 436 LSIVNNSTARILSLF 450
L+ L+L
Sbjct: 362 LAQAKQQPNLALTLL 376
>gi|311695262|gb|ADP98135.1| flagellin FliC [marine bacterium HP15]
Length = 614
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 74/205 (36%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++SA +L +R+SSGLR++ A D+AA +I+ +S L+
Sbjct: 5 INTNVASLSAQNQLGQSQNLSNQALERLSSGLRINSAKDDAAGLAISTRFQSQISGLNVA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ + + + + I+ +D +++ E+ Q +++
Sbjct: 65 TRNANDGISLAQTAEGALDEITNNLQRIRELAVQSANATNSDSDREALNQEVDQRIAEVN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SFNG L G+ + + + + S
Sbjct: 125 RIASQTSFNGLKVLDGTFGTQAFQVGANAGETISVAGLDSRGSQLGATISQTSGLAATSL 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
G LD + +
Sbjct: 185 GAGDAGETSLDVSGLDFSGDITVSS 209
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 38/390 (9%), Positives = 103/390 (26%), Gaps = 6/390 (1%)
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
+ + S + + T S + ++++ + +
Sbjct: 231 QAIQGEIDSNGNLADVTVAASDDGNSIVFSNASTTDIAATIDISDASGTQVSVTGADVST 290
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
++ + + S + + V + + L +
Sbjct: 291 TDGSTTATQVTLFDPSTLDLDSGVTGSFDVTDDSSNTTTVSFSLAAGTGNTLADLTSAVQ 350
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
G G V+ + I+ + T + + + +
Sbjct: 351 AGLTAAGFTAGTDLGAVDDGSVVQIESDSAVTYDIANITASDGGTPNASTGGSVSTLTAA 410
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + +G + + + ++ + + S + D
Sbjct: 411 EEQTVASRFEAGETTSFSLNVAGEAIEVTDASNLQDVVAQINGATKDTGVSAFLSSSGDD 470
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
S + D + + N N + +
Sbjct: 471 IVFASAKGENFTASITTDVDGDGTNEVDLTVDS------STDPNSNVSVNGLDISTRAGS 524
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ + +D I +G++ +R + + + R++DAD A+E+ +
Sbjct: 525 DQALVAVDFAIDQVNQFRSDLGAVQNRFESTIANLSTSVENLSASNSRILDADFAAETAK 584
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
LS Q QQ + L+ N ++LSL +
Sbjct: 585 LSKAQVLQQAGISVLAQANARPQQVLSLLQ 614
>gi|217032029|ref|ZP_03437530.1| hypothetical protein HPB128_187g56 [Helicobacter pylori B128]
gi|171472176|gb|ACB46841.1| FlaA [Helicobacter pylori B128]
gi|216946339|gb|EEC24945.1| hypothetical protein HPB128_187g56 [Helicobacter pylori B128]
Length = 510
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 66/505 (13%), Positives = 145/505 (28%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N +V + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
Q+ ++ + + + S + + + T + +
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGCLNLRSIDG 304
Query: 301 PGYTNSTVAKVG----------------------------------NTHYYVDTESTTLD 326
G T + N D++
Sbjct: 305 RGIEIKTDSVGNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFT 364
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-ATAAAGKI--- 382
+ ++ + +++ + + T G +
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGSGVTTLRGAMVVI 424
Query: 383 ---GSISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
S + + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|15802358|ref|NP_288384.1| flagellin [Escherichia coli O157:H7 EDL933]
gi|12516024|gb|AAG56938.1|AE005415_3 flagellar biosynthesis; flagellin, filament structural protein
[Escherichia coli O157:H7 str. EDL933]
Length = 585
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 42/253 (16%), Positives = 77/253 (30%), Gaps = 3/253 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGETITIDLKKIDSDTLGLNGFNVNGKGTITN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
LK + + + T G +
Sbjct: 184 KAATVSDLTSAGAKLNTTTGLYDLKTENTLLTTDAAFDKLGNGDKVTVGGVDYTYNAKSG 243
Query: 240 DQAKGIATIPVPL 252
D +T +
Sbjct: 244 DFTTTKSTAGTGV 256
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/296 (13%), Positives = 79/296 (26%)
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
D + + D + K + + L D +
Sbjct: 290 TKDGTVSFETDSAGNITIGGSQAYVDDAGNLTTNNAGSAAKADMKALXKAASEGSDGASL 349
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ A V + + TS S S
Sbjct: 350 TFNGTEYTIAKATPATTTPVAPLIPGGITYQATVSKDVVLSETKAAAATSSITFNSGVLS 409
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
T + + + TV+ N T + +
Sbjct: 410 KTIGFTAGESSDAAKSYVDDKGGITNVADYTVSYSVNKDNGSVTVAGYASATDTNKDYAP 469
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + V +N T+ + A ++ +D I +G+I +R+ +
Sbjct: 470 AIGTAVNVNSAGKITTETTSAGSATTNPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNL 529
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 530 NNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 585
>gi|8071780|gb|AAF71896.1| flagellin [Escherichia coli]
gi|8071782|gb|AAF71897.1| flagellin [Escherichia coli]
Length = 585
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 44/257 (17%), Positives = 79/257 (30%), Gaps = 3/257 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGETITIDLKKIDSDTLGLNGFNVNGKGTITN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
LK + + + T G +
Sbjct: 184 KAATVSDLTSAGAKLNTTTGLYDLKTENTLLTTDAAFDKLGNGDKVTVGGVDYTYNAKSG 243
Query: 240 DQAKGIATIPVPLPAAP 256
D +T + AA
Sbjct: 244 DFTTTKSTAGTGVDAAA 260
Score = 100 bits (247), Expect = 7e-19, Method: Composition-based stats.
Identities = 41/296 (13%), Positives = 80/296 (27%)
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
D + + D + K + + L D +
Sbjct: 290 TKDGTVSFETDSAGNITIGGSQAYVDDAGNLTTNNAGSAAKADMKALLKAASEGSDGASL 349
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ + A V + + TS S S
Sbjct: 350 TFNGTEYTIAKATPATTSPVAPLIPGGISYQATVSKDVVLSETKAAAATSSITFNSGVLS 409
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
T + + + TV+ N T + +
Sbjct: 410 KTIGFTAGESSDAAKSYVDDKGGITNVADYTVSYSVNKDNGSVTVAGYASATDTNKDYAP 469
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + V +N T+ + A ++ +D I +G+I +R+ +
Sbjct: 470 AIGTAVNVNSAGKITTETTSAGSATTNPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNL 529
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 530 NNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 585
>gi|317403791|gb|EFV84271.1| flagellar biosynthesis [Achromobacter xylosoxidans C54]
Length = 566
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 50/377 (13%), Positives = 100/377 (26%), Gaps = 3/377 (0%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN+ ++ A L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 3 AVINTNYLSLVAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGMAIANRFTANVKGLT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQ 118
+ G S + S+ + ++ + S+Q EI Q
Sbjct: 63 QAARNANDGISLAQTTEGAASEINTHLQRVRELSVQAGNGSYSQEQLNSMQDEIKQRLDD 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ I++ + FNG L + T + + + + + T + +
Sbjct: 123 IDRISQQTDFNGVKVLSANAKPLTLQVGANDGETITLNLSEISVKTLGLDGFNVNGSGVT 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ T + + + + T A
Sbjct: 183 QNRSATVSDLQAAGGATVAANEWQVTTTHAAATADQVFGKLENGNKVTVGTAATGTTYTY 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
K A A + + + V AT K +I
Sbjct: 243 DAANKNFTFTDKSASDAAAVNALADKLRPATGTATGTYTHSNGAAATSFEVDATGKVTIG 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ ++ N+ + + S+ T A
Sbjct: 303 GQAAFLDTDGNLTTNSAGGTAATIRGVMTAAAQNTGAAGTSSVAIGGKTYSNVGGAGGAD 362
Query: 359 LAMEEMVSFIDTQIKCA 375
D +
Sbjct: 363 QLQFTNTIASDALLANV 379
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/329 (10%), Positives = 80/329 (24%), Gaps = 6/329 (1%)
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A +F + +D + A K + + + +
Sbjct: 244 AANKNFTFTDKSASDAAAVNALADKLRPATGTATGTYTHSNGAAATSFEVDATGKVTIGG 303
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
V A T + +A + A
Sbjct: 304 QAAFLDTDGNLTTNSAGGTAATIRGVMTAAAQNTGAAGTSSVAIGGKTYSNVGGAGGADQ 363
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
T+ + + ++ + + +
Sbjct: 364 LQFTNTIASDALLANVKANTTAGDVTITLGSGITSATVAFNAGNSTNTYVDDKGTFTSTQ 423
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
+ NT T +N + T+ ++
Sbjct: 424 TYTTNYLVDPNTGKVTVKSGTGTGDYAPKIGAE------AKVNSSGKLTTEDTSKGTLTA 477
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ + +D G++G++ +R+ + + + + R+ DAD A+E + +
Sbjct: 478 DPLKTLDAAFTKLDKLTGELGAVQNRLESTIANLNNVVNNLSNARSRIQDADYATEVSNM 537
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q QQ L+ N +LSL R
Sbjct: 538 SKAQILQQAGTSVLAQANQVPQTVLSLLR 566
>gi|91211142|ref|YP_541128.1| flagellin [Escherichia coli UTI89]
gi|117624065|ref|YP_852978.1| flagellin [Escherichia coli APEC O1]
gi|218558781|ref|YP_002391694.1| flagellin [Escherichia coli S88]
gi|237705880|ref|ZP_04536361.1| flagellin [Escherichia sp. 3_2_53FAA]
gi|300940374|ref|ZP_07154960.1| flagellin [Escherichia coli MS 21-1]
gi|6009837|dbj|BAA85083.1| flagellin [Escherichia coli]
gi|8071784|gb|AAF71898.1| flagellin [Escherichia coli]
gi|8071786|gb|AAF71899.1| flagellin [Escherichia coli]
gi|8071788|gb|AAF71900.1| flagellin [Escherichia coli]
gi|30059856|gb|AAP13300.1| FliC [Escherichia coli]
gi|91072716|gb|ABE07597.1| flagellin [Escherichia coli UTI89]
gi|115513189|gb|ABJ01264.1| flagellin [Escherichia coli APEC O1]
gi|218365550|emb|CAR03277.1| flagellar filament structural protein (flagellin) [Escherichia coli
S88]
gi|226900637|gb|EEH86896.1| flagellin [Escherichia sp. 3_2_53FAA]
gi|294491527|gb|ADE90283.1| flagellin FliC [Escherichia coli IHE3034]
gi|300454811|gb|EFK18304.1| flagellin [Escherichia coli MS 21-1]
gi|307626600|gb|ADN70904.1| flagellin [Escherichia coli UM146]
gi|315286640|gb|EFU46073.1| flagellin [Escherichia coli MS 110-3]
gi|323952418|gb|EGB48291.1| flagellin [Escherichia coli H252]
gi|323956320|gb|EGB52063.1| flagellin [Escherichia coli H263]
Length = 585
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 44/257 (17%), Positives = 79/257 (30%), Gaps = 3/257 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGETITIDLKKIDSDTLGLNGFNVNGKGTITN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
LK + + + T G +
Sbjct: 184 KAATVSDLTSAGAKLNTTTGLYDLKTENTLLTTDAAFDKLGNGDKVTVGGVDYTYNAKSG 243
Query: 240 DQAKGIATIPVPLPAAP 256
D +T + AA
Sbjct: 244 DFTTTKSTAGTGVDAAA 260
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 41/296 (13%), Positives = 80/296 (27%)
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
D + + D + K + + L D +
Sbjct: 290 TKDGTVSFETDSAGNITIGGSQAYVDDAGNLTTNNAGSAAKADMKALLKAASEGSDGASL 349
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ + A V + + TS S S
Sbjct: 350 TFNGTEYTIAKATPATTSPVAPLIPGGITYQATVSKDVVLSETKAAAATSSITFNSGVLS 409
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
T + + + TV+ N T + +
Sbjct: 410 KTIGFTAGESSDAAKSYVDDKGGITNVADYTVSYSVNKDNGSVTVAGYASATDTNKDYAP 469
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + V +N T+ + A ++ +D I +G+I +R+ +
Sbjct: 470 AIGTAVNVNSAGKITTETTSAGSATTNPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNL 529
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 530 NNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 585
>gi|126665054|ref|ZP_01736037.1| flagellin FliC [Marinobacter sp. ELB17]
gi|126630424|gb|EBA01039.1| flagellin FliC [Marinobacter sp. ELB17]
Length = 770
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 45/284 (15%), Positives = 89/284 (31%), Gaps = 3/284 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A +L + R+SSGLR++ A D+AA +I+ S L+
Sbjct: 5 INTNIASLNAQNQLGKSQAQNDQALQRLSSGLRINSAKDDAAGLAISTRFSSQITGLNVA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S A+ +++ + + I+ +D +++ E+ Q ++
Sbjct: 65 VRNANDAISLSQTAEGALNEVTNNLQRIRELAVQSANSTNSSSDREALNQEVQQRIEEVN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++FNG L G + + +V + D N V+ ++ + L +
Sbjct: 125 RIAGQTAFNGLKVLDGSFGDAVFQVGANVGETIGLDLNTSVRTDSVGSIAQATSEDLSTV 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ D + + +
Sbjct: 185 IAKGTAAVTGSAATFAFDATNLGGDYSTVAAVSGSDTIDFSTGTIDAGTTGSDTIDFSSS 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGN 284
T V A TT+ T S + G
Sbjct: 245 TIAAGDTAVVNGVTFTFADATTASTVDSATAVTVNVDFNGAGGT 288
Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats.
Identities = 30/284 (10%), Positives = 71/284 (25%)
Query: 168 YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
T ++T G + + + A+ +
Sbjct: 487 NRTFTITDPDGANTLSVTLDGNIGGASDVVTAITSAAGYSAGNFAATVDGTNVLLTDGAN 546
Query: 228 SGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
T+ + + +
Sbjct: 547 LTGSFAIGGTNETLITDENVAASTAAGVTDVAQVTASSVTLAANDLTFQFGDGDALAVKA 606
Query: 288 WVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT 347
+T ++ + + V + S + + + ++ +
Sbjct: 607 GTYSTAQSFVDAVNTTLAGNANAVLGDDNVLTITSGDAFTVATAGTDAGTVFTAGENAVA 666
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
+ E + +D + + G+I +R + + +
Sbjct: 667 GSLDDADVLTVAGANETLQRVDAALNSISDLRSTFGAIQNRFESTIANLSTSVENLSSAN 726
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+VDAD ASE+ L+ Q QQ + L+ N ++LSL +
Sbjct: 727 SRIVDADFASETAALAKSQVLQQAGISVLAQANARPQQVLSLLQ 770
>gi|242392306|dbj|BAH80326.1| flagellin [Bacillus sp. PS3]
Length = 327
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 95/300 (31%), Gaps = 3/300 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++L N +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTYRQLTTNTTNASKSIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLEQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ T D + +Q E QL S++
Sbjct: 63 SRNAQDGISLIQTAEGALNEVHSILQRMRELATQAANSTNTQADREQLQKEFNQLTSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN + L ++ ++ + + + + L T +S
Sbjct: 123 RIGNTTEFNTQKLLNGNVSGASPIKLQIGANTNQSFEIKIFDMRAQALGLAGTTAGSKAS 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + +S + A A
Sbjct: 183 GLGAATTSNGTSVSNELKVGISSATFTSGATNQLTDVSNASTPEYALNIMSFSGATAAIS 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ A + + + + A + T G D+ + +
Sbjct: 243 KIDIAINTVSTERARLGSYQNRLEHTINNLDTSAENLTAAESGIRDVDMAKEMMEFTKQN 302
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 38/137 (27%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + + + N + +S ID I
Sbjct: 191 NGTSVSNELKVGISSATFTSGATNQLTDVSNASTPEYALNIMSFSGATAAISKIDIAINT 250
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ ++GS +R+ + + + + + D DMA E + Q
Sbjct: 251 VSTERARLGSYQNRLEHTINNLDTSAENLTAAESGIRDVDMAKEMMEFTKQNILTQAGPI 310
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +L L R
Sbjct: 311 VLAQANQQPQSVLQLLR 327
>gi|71067029|gb|AAZ22698.1| flagellin [Bacillus cereus]
Length = 397
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 27 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 86
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S+ G S + A + ++ +++ +++ + ++Q E +L+ Q++
Sbjct: 87 SNNTQDGMSLIRTADSALNSVSNILLRMRDLANQSANGTNTNENKAAMQKEFGELKEQIK 146
Query: 121 DIARGSSFNGENWLRTDLG 139
IA + FN ++ L D G
Sbjct: 147 YIAENTQFNDQHLLNADKG 165
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 59/181 (32%)
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ G D+ V+A YTNS K + ++T + K
Sbjct: 217 NATMDRLDATVPGTRDVDVQAAKDAFDKVKGFYTNSDSVKAIERAFEDYATASTAGTAKA 276
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
+ N T ++ ID +K +G+ +R+
Sbjct: 277 DAATAIKAAFDLAANKVGKPATGGAQGSANSLGAITKIDAALKTVADNRATLGATLNRLD 336
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ +K ++ ++ DADMA E + ++ + + + LS N + + L
Sbjct: 337 FNVNNLKSQASSMAAAASQVEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLL 396
Query: 451 R 451
+
Sbjct: 397 Q 397
>gi|290437|gb|AAA23797.1| flagellin [Escherichia coli]
Length = 595
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 51/372 (13%), Positives = 97/372 (26%), Gaps = 3/372 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGSGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + S A +
Sbjct: 184 KAATISDLTAAKMDAATNTITTTNNALTASKALDQLKDGDTVTIKADAAQTATVYTYNAS 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + A + ++ S A + T +
Sbjct: 244 AGNFSFSNVSNNTSAKAGDVAASLLPPAGQTASGVYKAASGEVNFDVDANGKITIGGQEA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + S+ T + T A
Sbjct: 304 YLTSDGNLTTNDAGGATAATLDGLFKKAGDGQSIGFNKTASVTMGGTTYNFKTGADAGAA 363
Query: 360 AMEEMVSFIDTQ 371
VSF DT
Sbjct: 364 TANAGVSFTDTA 375
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 44/373 (11%), Positives = 97/373 (26%), Gaps = 2/373 (0%)
Query: 82 SKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSS 141
+ + S + ++ D+A ++
Sbjct: 223 DTVTIKADAAQTATVYTYNASAGNFSFSNVSNNTSAKAGDVAASLLPPAGQTASGVYKAA 282
Query: 142 TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
+ + V + G+ T D L ++ + I
Sbjct: 283 SGEVNFDVDANGKITIGGQEAYLTSDGNLTTNDAGGATAATLDGLFKKAGDGQSIGFNKT 342
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
+ + Y+ A+ T A + A T
Sbjct: 343 ASVTMGGTTYNFKTGADAGAATANAGVSFTDTASKETVLNKVATAKQGTAVAANGDTSAT 402
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
+ SG ++ +A + + T T T Y +D
Sbjct: 403 ITYKSGVQTYQAVFAAGDGTASAKYADNTDVSNATATYTDADGEMTTIGSYTTKYSIDAN 462
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM--EEMVSFIDTQIKCATAAA 379
+ + + + ++ + ++ + +D I
Sbjct: 463 NGKVTVDSGTGSGKYAPKVGAEVYVSANGTLTTDATSEGTVTKDPLKALDEAISSIDKFR 522
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G+I +R+ + + + R+ DAD A+E + +S Q QQ L+
Sbjct: 523 SSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKA 582
Query: 440 NNSTARILSLFRG 452
N ++LSL +G
Sbjct: 583 NQVPQQVLSLLQG 595
>gi|52082071|ref|YP_080862.1| flagellin [Bacillus licheniformis ATCC 14580]
gi|52787460|ref|YP_093289.1| flagellin [Bacillus licheniformis ATCC 14580]
gi|319647938|ref|ZP_08002156.1| hag protein [Bacillus sp. BT1B_CT2]
gi|52005282|gb|AAU25224.1| flagellin protein Hag [Bacillus licheniformis ATCC 14580]
gi|52349962|gb|AAU42596.1| Hag [Bacillus licheniformis ATCC 14580]
gi|194360421|gb|ACF57860.1| flagellin [Bacillus licheniformis]
gi|317390279|gb|EFV71088.1| hag protein [Bacillus sp. BT1B_CT2]
Length = 310
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 38/204 (18%), Positives = 80/204 (39%), Gaps = 4/204 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ +L N + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTLNRLSANNGASQKNMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS----KSIQSEITQLQSQL 119
S G S + A+ +++ ++ ++ + GT +IQ EI L+ ++
Sbjct: 63 SKNAQDGISLIQTAEGALTETHSILQRVRELVVQAGNTGTQQTEDLTAIQDEIKALKDEI 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FNG+ L + + + G I ++ +
Sbjct: 123 DGISERTEFNGKKLLDGTFKAPADPANPAAGEKSLVFQIGANATQQISVNIEKMSTDALG 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVL 203
D + G ++ + V
Sbjct: 183 VKDPADTTGRTLVTNQSVKDIDVT 206
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 53/134 (39%)
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
D + + + S+ +++T+ A+ A + + + +D+ I +A
Sbjct: 177 STDALGVKDPADTTGRTLVTNQSVKDIDVTKFADNAATATDVGFDTQLKIVDSAINQVSA 236
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
K+G++ +R+ + + + + R+ D DMA E + + Q + L+
Sbjct: 237 QRAKLGAVQNRLEHTINNLGASSENLTAAESRIRDVDMAKEMSEFTKNNILSQASQAMLA 296
Query: 438 IVNNSTARILSLFR 451
N +L L R
Sbjct: 297 QANQQPQNVLQLLR 310
>gi|260776495|ref|ZP_05885390.1| flagellin protein FlaF [Vibrio coralliilyticus ATCC BAA-450]
gi|260607718|gb|EEX33983.1| flagellin protein FlaF [Vibrio coralliilyticus ATCC BAA-450]
Length = 377
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 46/345 (13%), Positives = 98/345 (28%), Gaps = 3/345 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + L +R+SSG R++ A D+AA I+ ++S L
Sbjct: 4 TVNTNVSAMTAQRYLTNATDMLNQSLERLSSGNRINSAKDDAAGLQISNRLESQMRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ +++ +++ + ++Q E+ L +L
Sbjct: 64 AMRNANDGISIMQTAEGAMNETTNLLQRMRDLSLQSANGSNSRAERDALQEEMAALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L SS+ I S + +
Sbjct: 124 NRIAETTSFGGRKLLNGSFASSSFQIGGSSGEAVQVSLKNMRSDSIEMGGFSYIAAGKAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + E Q + T + +
Sbjct: 184 NNWQVSQGSQTLVMEYTNAEGQQESIQIEAKAGDDIEELATYINGQTDKVSASVNEDGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + + V T +
Sbjct: 244 QVFMAGKETSGTISFSGSLAGELQMGLAGYEAVDNLDISKVGGAQRAVSVIDTALKYVDG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTL 344
+ + + + + L + K+ D +
Sbjct: 304 HRAELGAMQNRFNHAINNLGNINENLAASNSRIKDTDYAKETTQM 348
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 45/375 (12%), Positives = 106/375 (28%), Gaps = 11/375 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
A+ ++ A D+++ ++ + + + +
Sbjct: 13 TAQRYLTNATDMLNQSLERL-----SSGNRINSAKDDAAGLQISNRLESQMRGLDVAMRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + ++ D+ +
Sbjct: 68 ANDGISIMQTAEGAMNETTNLLQRMRDLSLQSANGSNSRAERDALQEEMAALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ S +S I + S +++ + IA
Sbjct: 128 ETTSFGGRKLLNGSFASSSFQIGGSSGEAVQVSLKNMRSDSIEMGGFSYIAAGKADNNWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
+ + T + + S DI AT N T + + ++
Sbjct: 188 VSQGSQTLVMEYTNAEGQQESIQIEAKAGDDIEELATYINGQTDKVSASVNEDGQLQVFM 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+T T S + + ++ + VS IDT +K
Sbjct: 248 AGKETSGTISFSGSLAGELQMGLAGYEA------VDNLDISKVGGAQRAVSVIDTALKYV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
++G++ +R + + + + + + R+ D D A E+T++ Q QQ++
Sbjct: 302 DGHRAELGAMQNRFNHAINNLGNINENLAASNSRIKDTDYAKETTQMLKQQILQQVSTSI 361
Query: 436 LSIVNNSTARILSLF 450
L+ L+L
Sbjct: 362 LAQAKQQPNLALTLL 376
>gi|15642143|ref|NP_231775.1| flagellin [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121586820|ref|ZP_01676602.1| flagellin FlaE [Vibrio cholerae 2740-80]
gi|121727212|ref|ZP_01680379.1| flagellin FlaE [Vibrio cholerae V52]
gi|147675318|ref|YP_001217667.1| flagellin [Vibrio cholerae O395]
gi|153818818|ref|ZP_01971485.1| flagellin FlaE [Vibrio cholerae NCTC 8457]
gi|153822628|ref|ZP_01975295.1| flagellin FlaE [Vibrio cholerae B33]
gi|227082269|ref|YP_002810820.1| flagellin FlaE [Vibrio cholerae M66-2]
gi|229507771|ref|ZP_04397276.1| flagellin protein FlaF [Vibrio cholerae BX 330286]
gi|229511992|ref|ZP_04401471.1| flagellin protein FlaF [Vibrio cholerae B33]
gi|229519128|ref|ZP_04408571.1| flagellin protein FlaF [Vibrio cholerae RC9]
gi|229607316|ref|YP_002877964.1| flagellin [Vibrio cholerae MJ-1236]
gi|254849230|ref|ZP_05238580.1| flagellin FlaE [Vibrio cholerae MO10]
gi|255745119|ref|ZP_05419068.1| flagellin protein FlaF [Vibrio cholera CIRS 101]
gi|262153493|ref|ZP_06028623.1| flagellin protein FlaF [Vibrio cholerae INDRE 91/1]
gi|262167503|ref|ZP_06035209.1| flagellin protein FlaF [Vibrio cholerae RC27]
gi|298497834|ref|ZP_07007641.1| flagellin FlaE [Vibrio cholerae MAK 757]
gi|172044519|sp|P0C6C7|FLAE_VIBCH RecName: Full=Flagellin E
gi|172047631|sp|A5F6A9|FLAE_VIBC3 RecName: Full=Flagellin E
gi|9656696|gb|AAF95289.1| flagellin FlaE [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121548987|gb|EAX59026.1| flagellin FlaE [Vibrio cholerae 2740-80]
gi|121630457|gb|EAX62850.1| flagellin FlaE [Vibrio cholerae V52]
gi|126510661|gb|EAZ73255.1| flagellin FlaE [Vibrio cholerae NCTC 8457]
gi|126519876|gb|EAZ77099.1| flagellin FlaE [Vibrio cholerae B33]
gi|146317201|gb|ABQ21740.1| flagellin FlaE [Vibrio cholerae O395]
gi|227010157|gb|ACP06369.1| flagellin FlaE [Vibrio cholerae M66-2]
gi|227014040|gb|ACP10250.1| flagellin FlaE [Vibrio cholerae O395]
gi|229343817|gb|EEO08792.1| flagellin protein FlaF [Vibrio cholerae RC9]
gi|229351957|gb|EEO16898.1| flagellin protein FlaF [Vibrio cholerae B33]
gi|229355276|gb|EEO20197.1| flagellin protein FlaF [Vibrio cholerae BX 330286]
gi|229369971|gb|ACQ60394.1| flagellin protein FlaF [Vibrio cholerae MJ-1236]
gi|254844935|gb|EET23349.1| flagellin FlaE [Vibrio cholerae MO10]
gi|255736949|gb|EET92345.1| flagellin protein FlaF [Vibrio cholera CIRS 101]
gi|262024075|gb|EEY42770.1| flagellin protein FlaF [Vibrio cholerae RC27]
gi|262030730|gb|EEY49364.1| flagellin protein FlaF [Vibrio cholerae INDRE 91/1]
gi|297542167|gb|EFH78217.1| flagellin FlaE [Vibrio cholerae MAK 757]
Length = 378
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 44/357 (12%), Positives = 97/357 (27%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SA+ A + L + L +R+SSG R++ A D+AA I+ +++ L
Sbjct: 4 TVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLGI 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S + A+ M + ++ +++ + ++Q E+ L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L ++ I S + + L
Sbjct: 124 NRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAALAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + + T +
Sbjct: 184 KQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGKTDKVSASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + N + + V T +
Sbjct: 244 QLYIAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDTALKYVDG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D L + K+ D + + + +
Sbjct: 304 HRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTS 360
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 44/376 (11%), Positives = 104/376 (27%), Gaps = 11/376 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+A+ ++ A ++++ ++ + + + + G
Sbjct: 13 VAQRHLNSASEMLNQSLERL-----SSGNRINSAKDDAAGLQISNRLETQMRGLGIAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + + ++ + +
Sbjct: 68 ANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ AS I + S +++ + +A
Sbjct: 128 ETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAALADKQWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
S + + DI AT N T + + ++
Sbjct: 188 VTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGKTDKVSASVNEKGQLQLYI 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+T T S + + + + + VS IDT +K
Sbjct: 248 AGKETSGTLSFSGSLANELQMNLLGYEA------VDNLDISSAGGAQRAVSVIDTALKYV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
++G++ +R + + + + R+ DAD A E+T++ Q QQ++
Sbjct: 302 DGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSV 361
Query: 436 LSIVNNSTARILSLFR 451
L+ +L L R
Sbjct: 362 LAQAKRQPKFVLFLLR 377
>gi|26248190|ref|NP_754230.1| flagellin [Escherichia coli CFT073]
gi|227885650|ref|ZP_04003455.1| flagellin [Escherichia coli 83972]
gi|300993901|ref|ZP_07180601.1| bacterial flagellin [Escherichia coli MS 45-1]
gi|301050721|ref|ZP_07197581.1| bacterial flagellin [Escherichia coli MS 185-1]
gi|26108594|gb|AAN80797.1|AE016762_50 Flagellin [Escherichia coli CFT073]
gi|6009831|dbj|BAA85080.1| flagellin [Escherichia coli]
gi|222033664|emb|CAP76405.1| flagellin [Escherichia coli LF82]
gi|227837223|gb|EEJ47689.1| flagellin [Escherichia coli 83972]
gi|300297607|gb|EFJ53992.1| bacterial flagellin [Escherichia coli MS 185-1]
gi|300406443|gb|EFJ89981.1| bacterial flagellin [Escherichia coli MS 45-1]
gi|307553937|gb|ADN46712.1| flagellin [Escherichia coli ABU 83972]
gi|312946515|gb|ADR27342.1| flagellin [Escherichia coli O83:H1 str. NRG 857C]
gi|315290272|gb|EFU49650.1| bacterial flagellin [Escherichia coli MS 153-1]
Length = 595
Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats.
Identities = 51/372 (13%), Positives = 97/372 (26%), Gaps = 3/372 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGSGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + S A +
Sbjct: 184 KAATISDLTAAKMDAATNTITTTNNALTASKALDQLKDGDTVTIKADAAQTATVYTYNAS 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + A + ++ S A + T +
Sbjct: 244 AGNFSFSNVSNNTSAKAGDVAASLLPPAGQTASGVYKAASGEVNFDVDANGKITIGGQEA 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + S+ T + T A
Sbjct: 304 YLTSDGNLTTNDAGGATAATLDGLFKKAGDGQSIGFNKTASVTMGGTTYNFKTGADAGAA 363
Query: 360 AMEEMVSFIDTQ 371
VSF DT
Sbjct: 364 TANAGVSFTDTA 375
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/373 (11%), Positives = 97/373 (26%), Gaps = 2/373 (0%)
Query: 82 SKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSS 141
+ + S + ++ D+A ++
Sbjct: 223 DTVTIKADAAQTATVYTYNASAGNFSFSNVSNNTSAKAGDVAASLLPPAGQTASGVYKAA 282
Query: 142 TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
+ + V + G+ T D L ++ + I
Sbjct: 283 SGEVNFDVDANGKITIGGQEAYLTSDGNLTTNDAGGATAATLDGLFKKAGDGQSIGFNKT 342
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
+ + Y+ A+ T A + A T
Sbjct: 343 ASVTMGGTTYNFKTGADAGAATANAGVSFTDTASKETVLNKVATAKQGTAVAANGDTSAT 402
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
+ SG ++ +A + + T T T Y +D
Sbjct: 403 ITYKSGVQTYQAVFAAGDGTASAKYADNTDVSNATATYTDADGEMTTIGSYTTKYSIDAN 462
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM--EEMVSFIDTQIKCATAAA 379
+ + + + ++ + ++ + +D I
Sbjct: 463 NGKVTVDSGTGTGKYAPKVGAEVYVSANGTLTTDATSEGTVTKDPLKALDEAISSIDKFR 522
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G+I +R+ + + + R+ DAD A+E + +S Q QQ L+
Sbjct: 523 SSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKA 582
Query: 440 NNSTARILSLFRG 452
N ++LSL +G
Sbjct: 583 NQVPQQVLSLLQG 595
>gi|153213262|ref|ZP_01948674.1| flagellin FlaE [Vibrio cholerae 1587]
gi|153801647|ref|ZP_01956233.1| flagellin FlaE [Vibrio cholerae MZO-3]
gi|124116062|gb|EAY34882.1| flagellin FlaE [Vibrio cholerae 1587]
gi|124122824|gb|EAY41567.1| flagellin FlaE [Vibrio cholerae MZO-3]
Length = 378
Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats.
Identities = 44/357 (12%), Positives = 97/357 (27%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SA+ A + L + L +R+SSG R++ A D+AA I+ +++ L
Sbjct: 4 TVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLGI 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S + A+ M + ++ +++ + ++Q E+ L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERTALQEEMAALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L ++ I S + + L
Sbjct: 124 NRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAALAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + + T +
Sbjct: 184 KQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGQTDKVSASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + N + + V T +
Sbjct: 244 QLYIAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDTALKYVDG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D L + K+ D + + + +
Sbjct: 304 HRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTS 360
Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 44/376 (11%), Positives = 104/376 (27%), Gaps = 11/376 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+A+ ++ A ++++ ++ + + + + G
Sbjct: 13 VAQRHLNSASEMLNQSLERL-----SSGNRINSAKDDAAGLQISNRLETQMRGLGIAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + + ++ + +
Sbjct: 68 ANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERTALQEEMAALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ AS I + S +++ + +A
Sbjct: 128 ETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAALADKQWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
S + + DI AT N T + + ++
Sbjct: 188 VTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGQTDKVSASVNEKGQLQLYI 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+T T S + + + + + VS IDT +K
Sbjct: 248 AGKETSGTLSFSGSLANELQMNLLGYEA------VDNLDISSAGGAQRAVSVIDTALKYV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
++G++ +R + + + + R+ DAD A E+T++ Q QQ++
Sbjct: 302 DGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSV 361
Query: 436 LSIVNNSTARILSLFR 451
L+ +L L R
Sbjct: 362 LAQAKRQPKFVLFLLR 377
>gi|42522022|ref|NP_967402.1| flagellin [Bdellovibrio bacteriovorus HD100]
gi|39574553|emb|CAE78395.1| flagellin [Bdellovibrio bacteriovorus HD100]
gi|48927381|emb|CAG38107.1| flagellin [Bdellovibrio bacteriovorus]
Length = 282
Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 67/160 (41%), Gaps = 3/160 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L L+ ++++SG R++ A D+AA +I++ +K+ L
Sbjct: 5 INTNSASLNAQRVLWGTKIGLDKSMEKLASGFRINRAGDDAAGLAISENLKAQIRGLKQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S V +A+ M++ ++ ++ + + + E QL S++
Sbjct: 65 SRNAQDGISLVQVAEGSMNEISSILIRLRELSVQAASDTIGPVERQFLNVEYDQLVSEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
I+ G+ FNG L + R
Sbjct: 125 RISEGTEFNGTQLLAGVGSILDFQVGTRNNPEIDRISFDA 164
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 43/101 (42%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
N + ++K + + ++ ID I +A G+I +R+ I++ + + R
Sbjct: 176 VNLTSVSDKASAQNALAAIDQAIVSVSAMRADFGAIQNRLQSTVSNIQVSVENMSAANSR 235
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ D D+A E++ ++ Q L+ N+ L L
Sbjct: 236 IRDVDVAEETSEMTKNNILLQAGTSVLAQANSQANVALGLL 276
>gi|307637290|gb|ADN79740.1| flagellin [Helicobacter pylori 908]
Length = 510
Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats.
Identities = 69/505 (13%), Positives = 146/505 (28%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQVSSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N +V + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG----------------- 283
Q+ ++ + + + S + + + T
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLRSIDG 304
Query: 284 -----------------NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ TK S AK N D++
Sbjct: 305 RGIEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFT 364
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-ATAAAGKI--- 382
+ ++ + +++ + + T G +
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGSGVTTLRGAMVVI 424
Query: 383 ---GSISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
S + + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|114054887|gb|ABI50043.1| FlaA [Clostridium botulinum]
gi|114054889|gb|ABI50044.1| FlaA [Clostridium botulinum]
Length = 270
Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 80/194 (41%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNLNAMNAHRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ G D +I++EIT+L +++
Sbjct: 63 SRNSQDSISLIQTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L + T I + + T + T L ++
Sbjct: 123 RISKQTEFNTQKLLSGGFSAKTFQIGANKAQTLTLTIGDMSAKTLGVSGVSVSTAALATA 182
Query: 181 TDGTERYGLLDRNH 194
+ T L +
Sbjct: 183 SIETIDTALGKVST 196
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 40/111 (36%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T + + + + IDT + + K+G+ +R+ + +
Sbjct: 160 GDMSAKTLGVSGVSVSTAALATASIETIDTALGKVSTERAKLGANQNRLEHTINNLNTSS 219
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA E S Q A L+ N + +L L R
Sbjct: 220 ENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLLR 270
>gi|261886308|ref|ZP_06010347.1| flagellin B [Campylobacter fetus subsp. venerealis str. Azul-94]
Length = 519
Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats.
Identities = 70/515 (13%), Positives = 137/515 (26%), Gaps = 67/515 (13%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +AM+A N +L ++SSGLR+ AAD+A+ +IA ++S AL
Sbjct: 5 INTNIAAMNAHANAVGNNRDLSGSLGKLSSGLRIQTAADDASGMTIADSLRSQANALXQS 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKS----IQSEITQLQSQL 119
V A M + I ++ TIK K + ++ +S+IT+L +L
Sbjct: 65 IKNGNDAIGIVQTADKAMDEQIKILDTIKTKSCTKRLKTVKMQTLDVRFKSDITRLLEEL 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA ++FNG+ L + I + T + + ++ +
Sbjct: 125 DYIANTTAFNGQQLLNGSFSTKIFQIGAYSNETAKVSIGATNSNTIGHTRFETSSNVVYT 184
Query: 180 ST-------------------------------------------DGTERYGLLDRNHKI 196
K
Sbjct: 185 KNLAISGNSGSFAFTLKGIDGIAGGEYKFQAISSGTFASQGLAAVAEQVNAIADKTGVKA 244
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
V + + V S ++ K + + +A I +
Sbjct: 245 SVNNTQVFNGTKGVGIQSAAVTNLKINGVSIGNIKVSNLDADNVLIGAINKVKEQTGVEA 304
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
+ N + ++ + I + + +
Sbjct: 305 SKENGKLTLTARDGRAIQINGGNISRLGITQAKGGANVSFLGQISFTRQDARDIIMTFSA 364
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
+ S I + ++ + +D + +
Sbjct: 365 TGGQTNANGLSAALSANHIKEASVSLKTINDSVISSSVAAAMGFFNAGETKVDQRNSGVS 424
Query: 377 AAAGK------IGSISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMA 416
AG S + + +++ + + + D D A
Sbjct: 425 TYAGAQAMMSIAESARKTLDSIRSDLGSVQNQLVSTINNITVTQVNVKSAESQIRDVDFA 484
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ES S Q A+S N + +L L +
Sbjct: 485 EESANFSKFNILAQSGSYAMSQANAAQQNVLRLLQ 519
>gi|312877575|ref|ZP_07737534.1| flagellin domain protein [Caldicellulosiruptor lactoaceticus 6A]
gi|311795650|gb|EFR12020.1| flagellin domain protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 274
Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats.
Identities = 40/255 (15%), Positives = 85/255 (33%), Gaps = 3/255 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N AM+ +++ N L +++SSGLR++ A D+AA SI++ M++ L
Sbjct: 3 INNNIMAMNTYRQMGVNNSQLAKSVEKLSSGLRINRAGDDAAGLSISEKMRAQIRGLQQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D ++ E QL S+++
Sbjct: 63 SRNAQDGISLIQTAEGALNEIHSILQRMRELAVQAANDTNVTVDRGALNDEFKQLISEIK 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN ++ L+ D ++ A + + D + +
Sbjct: 123 RIAENTQFNEQDILKADFTANIQVGANKDQVITLSWKGFQTNALGEDGTDISNESISTYT 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + + L A
Sbjct: 183 GAQKAIETINNAIISVSKSRSKMGALQNRLEHTIANLDNAAENLQAAESRIRDVDMAKEM 242
Query: 241 QAKGIATIPVPLPAA 255
I A
Sbjct: 243 MNFTKYNILNQAATA 257
Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 18/148 (12%), Positives = 47/148 (31%)
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + + + ++ + ++
Sbjct: 127 NTQFNEQDILKADFTANIQVGANKDQVITLSWKGFQTNALGEDGTDISNESISTYTGAQK 186
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ I+ I + + K+G++ +R+ + + ++ R+ D DMA E +
Sbjct: 187 AIETINNAIISVSKSRSKMGALQNRLEHTIANLDNAAENLQAAESRIRDVDMAKEMMNFT 246
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A L+ N +L L R
Sbjct: 247 KYNILNQAATAMLAQANQLPQAVLQLLR 274
>gi|332982145|ref|YP_004463586.1| flagellin domain-containing protein [Mahella australiensis 50-1
BON]
gi|332699823|gb|AEE96764.1| flagellin domain protein [Mahella australiensis 50-1 BON]
Length = 277
Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats.
Identities = 51/257 (19%), Positives = 96/257 (37%), Gaps = 3/257 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N AM+A ++L N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNVMAMNAYRQLTVTNNAGSKALEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLAQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + A+ G+++ ++ ++ + D + IQ EI++LQ ++
Sbjct: 63 SRNAQDGISLIQTAEGGLNEVHSILQRMRELVVQAANDTNTNKDREQIQQEISELQKEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L + S + I + S +T +D + + S
Sbjct: 123 RIASTTQFNTKNLLDGTIASGSELIFQIGANSGQVISLAIATMTAAALGVDASAISVGSY 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + + I + TI+ A + +
Sbjct: 183 GASTISGYIQIIDDAINDVSTERAKLGAYQNRLEHTIANLDTSAENLQAAESRIRDVDMA 242
Query: 241 QAKGIATIPVPLPAAPA 257
+ T L A
Sbjct: 243 KEMMEFTRTNILAQAGT 259
Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 32/87 (36%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ ID I + K+G+ +R+ + + ++ R+ D DMA E +
Sbjct: 191 IQIIDDAINDVSTERAKLGAYQNRLEHTIANLDTSAENLQAAESRIRDVDMAKEMMEFTR 250
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q L+ N +L L +
Sbjct: 251 TNILAQAGTAMLAQANAKPQTVLQLLQ 277
>gi|114054872|gb|ABI50036.1| FlaA [Clostridium botulinum B str. Eklund 17B]
gi|114054874|gb|ABI50037.1| FlaA [Clostridium botulinum B str. Eklund 17B]
Length = 267
Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 78/193 (40%), Gaps = 3/193 (1%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L S
Sbjct: 1 NHNLNAMNAHRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQAS 60
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
S + A+ +++ ++ ++ G D ++I++EIT+L +++
Sbjct: 61 RNSQDSISLIQTAEGALTETHSILQRMRELAVQGTNDTNVTADREAIKTEITELNNEINR 120
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I++ + FN + L I + + T + T L +++
Sbjct: 121 ISQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLSIGDMSAKTLGVSGVSVSTATLATAS 180
Query: 182 DGTERYGLLDRNH 194
T L +
Sbjct: 181 IETIDTALGKVST 193
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 40/113 (35%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + + + IDT + + K+G+ +R+ + +
Sbjct: 155 SIGDMSAKTLGVSGVSVSTATLATASIETIDTALGKVSTERAKLGANQNRLEHTINNLNT 214
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA E S Q A L+ N + +L L R
Sbjct: 215 SSENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLLR 267
>gi|2271026|gb|AAC01555.1| flagellin [Vibrio cholerae]
Length = 378
Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats.
Identities = 43/357 (12%), Positives = 96/357 (26%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SA+ A + L + L +R+SSG R++ A D+AA I+ +++ L
Sbjct: 4 TVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLGI 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S + A+ M + ++ +++ + ++Q E+ L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L ++ I S + + L
Sbjct: 124 NRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAALAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + + T +
Sbjct: 184 KQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGKTDKVSASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + N + + V +
Sbjct: 244 QLYIAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDAALKYVDG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D L + K+ D + + + +
Sbjct: 304 HRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTS 360
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 43/376 (11%), Positives = 103/376 (27%), Gaps = 11/376 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+A+ ++ A ++++ ++ + + + + G
Sbjct: 13 VAQRHLNSASEMLNQSLERL-----SSGNRINSAKDDAAGLQISNRLETQMRGLGIAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + + ++ + +
Sbjct: 68 ANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ AS I + S +++ + +A
Sbjct: 128 ETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAALADKQWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
S + + DI AT N T + + ++
Sbjct: 188 VTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGKTDKVSASVNEKGQLQLYI 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+T T S + + + + + VS ID +K
Sbjct: 248 AGKETSGTLSFSGSLANELQMNLLGYEA------VDNLDISSAGGAQRAVSVIDAALKYV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
++G++ +R + + + + R+ DAD A E+T++ Q QQ++
Sbjct: 302 DGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSV 361
Query: 436 LSIVNNSTARILSLFR 451
L+ +L L R
Sbjct: 362 LAQAKRQPKFVLFLLR 377
>gi|291537706|emb|CBL10818.1| Flagellin and related hook-associated proteins [Roseburia
intestinalis M50/1]
Length = 541
Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N SAM+A++ L +++SSG +++ AAD+AA SI++ M+S L+
Sbjct: 4 VVQHNMSAMNANRNLGVTTGMQAKSSEKLSSGYKINRAADDAAGLSISEKMRSQIRGLNK 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
SD G S + A+ ++++ ++ ++ D +++Q+E++QLQ +L
Sbjct: 64 ASDNAQDGISLIQTAEGALNESHSILQRMRELSVQAANGTETDDDREAVQNEVSQLQEEL 123
Query: 120 RDIARGSSFNGENW 133
I+ + FN
Sbjct: 124 TRISETTEFNTMKL 137
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 49/361 (13%), Positives = 97/361 (26%), Gaps = 6/361 (1%)
Query: 91 IKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVI 150
+ + T + ++ Q ++ ++ + + + K +
Sbjct: 187 GQETAIWAADGKTLTLNLSKNKVYTQDEIDELIANAK------QEDSSATGAPAEVKVSL 240
Query: 151 GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
+ I + + T + T + +K E
Sbjct: 241 KNGIFNADADTTTGTATAGGVKAVSDDGTVTGFVGADTISFTANKYGAEFNDTVFKFAFD 300
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
A + + A T A G L S +
Sbjct: 301 KAAGKEEVETNTAIEIDGTNGVTAGEYTIHLAAGKEYTAEDLEDILKTAGFDFDVKLSGN 360
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ + G S + + + G T++ + G T +
Sbjct: 361 TPDEPNTLFATSGASSVSDITMGNATAGAGLGSTDAMWGQAGYDSVSSGAGITLQIGANE 420
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
S M + N + + ++ ID IK +A GK+G+I +R+
Sbjct: 421 GQTMSFSIDDMSARALGVDGNKVDLSTQSGAQKATDTIDAAIKKVSAQRGKMGAIQNRLE 480
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + R+ D DMA E S Q L+ N ST +LSL
Sbjct: 481 HTISNLDTAAENTQTAESRIRDTDMAEEMVEYSKNNILAQAGQSMLAQANQSTQGVLSLL 540
Query: 451 R 451
+
Sbjct: 541 Q 541
>gi|39998129|ref|NP_954080.1| flagellin FliC [Geobacter sulfurreducens PCA]
gi|39985075|gb|AAR36430.1| flagellin FliC [Geobacter sulfurreducens PCA]
Length = 276
Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 69/155 (44%), Gaps = 3/155 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++A + L L +R+SSG R++ A D+AA +I++ M++ +++
Sbjct: 3 LTVNTNVASINAQRNLNVTQLALGKSLERLSSGYRINRAGDDAAGLAISENMRAQVRSMN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S V A+ +++ +++ ++ T I SE L+ +
Sbjct: 63 QAVRNANDGVSLVQTAEGALNEVSNILVRMRELATQAATGTVSSEQRGYIDSEFQALKGE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+ IA S FNG L + + + G+
Sbjct: 123 IDRIASSSEFNGAKLLDGTSATYSFQVGSRNTGND 157
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 45/96 (46%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
N A + + ID+ I ++ G +G++ +R+ + +++ + + R+ D D+
Sbjct: 181 NNGAAAKAALDSIDSAIANVSSIRGTLGAVQNRLQSTINNLQVSVENLSAAESRIRDVDV 240
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ASE+ L+ Q Q L+ N + LSL R
Sbjct: 241 ASETAALTRAQILTQAGTAILAQANQTPQSALSLLR 276
>gi|89056694|ref|YP_512145.1| flagellin-like [Jannaschia sp. CCS1]
gi|88866243|gb|ABD57120.1| flagellin protein [Jannaschia sp. CCS1]
Length = 522
Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats.
Identities = 99/522 (18%), Positives = 173/522 (33%), Gaps = 71/522 (13%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN SAM A Q L+ +N NL+ Q +S+G V+ A DN+A W+I+++M+SD
Sbjct: 1 MSSILTNSSAMVALQTLKSVNSNLQQTQSEISTGKSVASAKDNSAVWAISKVMESDVKGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ +++ LG S V +A+ D+++ IK KI A E D + IQ++I L Q++
Sbjct: 61 KGIQESLSLGESTVAVARNASETVTDLLTDIKGKIVAAQEENVDREKIQTDIDALTDQIK 120
Query: 121 DIARGSSFNGENWLRT----------------------------DLGSSTASIAKSVIGS 152
+ + FNG N ++ DL + T + +
Sbjct: 121 TVVGAAQFNGLNLVQGTEDVNILSSLDRSGNGDVSAASITVARQDLSTETGQYGSTAVTG 180
Query: 153 FIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYD 212
G V + G D + + ++ +
Sbjct: 181 GDLTALGSVNGAASGTSGAQAGLNAQIQVTEGGGAGFADGDTFSLTVGGSSFTVSLAGTE 240
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
++ ++T A + + + + + +++ + + +
Sbjct: 241 SATDVATLLQGEINARDIDGVTATLGANPGELVISNTNAFEDVDVSVSSSLTDTTGGAGA 300
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
A +I + T
Sbjct: 301 NLEELNGATGLTQTSGTIAQRAEAIDFSAAANVAEGDGFEVTVAGAAFRYVAGAGETMED 360
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS-------- 384
++ + ++ + D A A G
Sbjct: 361 VARGLKTAIDSNPPDGVTTKVQLDDATGAYSLAIDYDNASTTTIALAASTGGEASGGLFG 420
Query: 385 ----------------------ISSRIHLQEDF-------------IKLMRDAVEKGVGR 409
I + I +F + + D+++ G+G
Sbjct: 421 LDSLDVTTNAGADSALDNIESLIQNSIDAAAEFGSAGGRIETQSEFVGKLVDSLKSGIGT 480
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
LVDAD+ S RL ALQ QQQLA Q+LSI N + ILSLFR
Sbjct: 481 LVDADLEETSARLQALQVQQQLATQSLSIANQAPQNILSLFR 522
>gi|114054905|gb|ABI50052.1| FlaA [Clostridium botulinum]
Length = 270
Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 72/181 (39%), Gaps = 3/181 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNLNAMNAHRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ G D +I++EIT+L +++
Sbjct: 63 SRNSQDSISLIQTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L I + + T + +
Sbjct: 123 RISQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLTIGDMSAKTLGVSGVSVSDASKATD 182
Query: 181 T 181
+
Sbjct: 183 S 183
Score = 86.7 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 42/113 (37%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 158 TIGDMSAKTLGVSGVSVSDASKATDSIATIDKALGTVSTERAKLGANQNRLEHTINNLNT 217
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA E S Q A L+ N + +L L R
Sbjct: 218 SSENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLLR 270
>gi|125659369|dbj|BAF46886.1| flagellin [Escherichia coli]
Length = 574
Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats.
Identities = 38/274 (13%), Positives = 73/274 (26%), Gaps = 3/274 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + ++ +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSSMSTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQSSTGTNSKSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSSTLNLTGFNVNGEGSVAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
D + + A L
Sbjct: 184 KAATKADLTAAQLTTTAAGGTIAAPAADANGVTKYTVSAGLNESTVADVFAGLGDTAVVN 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + +
Sbjct: 244 ANITSGFDAVTGNNYTYHKDTNDFTFNATIAAGD 277
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 53/140 (37%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
T + ++ T + ++ V + TDA + + + +D I
Sbjct: 435 QTDGTLAAKNETEIFLQKDGSITNNSGKAVYVQEDGKFTTDAATKAATTADPLKALDDAI 494
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 495 SSIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAG 554
Query: 433 VQALSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 555 NSVLAKANQVPQQVLSLLQG 574
>gi|114054794|gb|ABI49998.1| FlaA [Clostridium botulinum F str. Langeland]
Length = 273
Score = 126 bits (315), Expect = 9e-27, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 75/194 (38%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ + +++SSGLR++ A D+ A +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRQMAINTGSNGKAIEKLSSGLRINRAGDDVAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D ++Q E+ +LQ+++
Sbjct: 63 SRNSQDSISLIQTAEGALNETHSILQRMRELAVQSANDTNVKVDRDNLQKEVAELQNEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L S I + G ++ + S
Sbjct: 123 RIASQTQFNTKNLLNGSAKSMVFQIGANKDQVMELTIAGMGTSALKVGSINIGSGKGAKS 182
Query: 181 TDGTERYGLLDRNH 194
G N
Sbjct: 183 ISGMIETIDNAINT 196
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 35/88 (39%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
M+ ID I + K+G+ +R+ + + ++ R+ D DMA E +
Sbjct: 186 MIETIDNAINTVSGERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFT 245
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A L+ N + +L L R
Sbjct: 246 KTNILTQAAQAMLAQANQAPQGVLQLLR 273
>gi|260222475|emb|CBA32076.1| hypothetical protein Csp_D30310 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 436
Score = 126 bits (315), Expect = 9e-27, Method: Composition-based stats.
Identities = 59/442 (13%), Positives = 125/442 (28%), Gaps = 28/442 (6%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+A L L +Q+ ++SG RV +D+ + A+ ++ A+ +
Sbjct: 16 NALSNLSKRQTALSNLQENLTSGKRVVRPSDDPTAAAQAERSLMRLSRIATDQRALEVQR 75
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ---SQLRDIARGSSF 128
+ + A++ + +D + + + + + Q+ QLQ Q+ A +
Sbjct: 76 NTMANAESTLGDVVDALQQFRELVVSAGNGSHTAAERQTIANQLQGLREQILGYANRTDT 135
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
NG+ +S + + Q T + + + R G
Sbjct: 136 NGQPLFGALASASVPFTGPTATAPDYTYNGLPGQTATSETAIASSLDGESAFMHQPARDG 195
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
+ + + + L +VSV D+S +
Sbjct: 196 VYNVSMTTIPAGRSLSTGNVSVTDSSLVTRATYKITF--------------------GPV 235
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
A ++ + + ++G + + K
Sbjct: 236 VAGATAGTSSTSYIIEEIPATGDLPTFPGPPYQVGPFTVPDYPSAKPVSVLIADQVGPPA 295
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
T + + M +A A+ + + +
Sbjct: 296 ITGMPGLSLTITGTPAAGDVITVDPNPSIFSVMDDAIRDIGGAVNANAASQAVGQAIYNL 355
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + +A G+ G + +R + +E R D DM QT
Sbjct: 356 DIGMNRVSAIRGQAGDLLNRADRITSNQESRSIQLEADRSRAEDLDMIKGVADFQNQQTG 415
Query: 429 QQLAVQALSIVNNSTARILSLF 450
Q A+Q+ + V LSLF
Sbjct: 416 YQAALQSYAQVQK-----LSLF 432
>gi|189911347|ref|YP_001962902.1| endoflagellar hook-filament protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167776023|gb|ABZ94324.1| Endoflagellar hook-filament protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
Length = 282
Score = 126 bits (315), Expect = 9e-27, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 63/142 (44%), Gaps = 3/142 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ A + L + + +++ + +++G+R++ D++ +S+++ ++S AL
Sbjct: 3 INHNISALVAKRALSNTSRDMDKSMEHLATGMRINRPGDDSLGFSVSEKLRSQIRALGQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + + + + + ++ ++ D K +Q E++QL ++
Sbjct: 63 ERNTQDGMSFLQVTEGSLDQVNSILQRLRELSVQSANGIYSDEDRKLVQLEVSQLVEEVE 122
Query: 121 DIARGSSFNGENWLRTDLGSST 142
I + FN L +
Sbjct: 123 RIGTSAEFNKVKPLDGRFSRAN 144
Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 35/101 (34%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
N + + + +D I +G+ +R+ L + + +
Sbjct: 178 GNKLTLSTPNKASDSLQVLDDAISKVNRLRSDLGAYYNRLDLTLKSLSNNYVNMVSSESQ 237
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ DADMA+E S Q + V L+ N ++ L
Sbjct: 238 IRDADMATEMVEYSKNQILTKSGVAMLAQANLRPESVVKLL 278
>gi|89075504|ref|ZP_01161915.1| flagellin [Photobacterium sp. SKA34]
gi|89048776|gb|EAR54347.1| flagellin [Photobacterium sp. SKA34]
Length = 516
Score = 126 bits (315), Expect = 9e-27, Method: Composition-based stats.
Identities = 59/377 (15%), Positives = 114/377 (30%), Gaps = 7/377 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I TN +AM+A + L + ++ ++SSGLR++ A D+AA I+ + + L+
Sbjct: 4 TINTNVTAMTAQRNLNSASSSVADSMQKLSSGLRINSAKDDAAGLQISNRLTNQTNGLNV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M ++ +M ++ D +++Q E+ QLQS++
Sbjct: 64 AMRNANDGVSMAQTAEGAMQESTTIMERMRELALQSANGSNSDKDREAMQKEMGQLQSEM 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G+N L G + I + + + + Y V
Sbjct: 124 NRIADTTSFGGQNLLDGSFGEKSFQIGANSNETQSLELMDVSSHSLGRSYSGVADVTKAL 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + ++ T + KL G
Sbjct: 184 ADEFEAGT----STGDKTFSLKLGDTEHKIEVTKDMTAEDLQNKLNNIDGISNIKVTNGD 239
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ K T G + + A N DI + + T
Sbjct: 240 VEGKAAEAAVQATQTLSGISTATKGMDLTIAGLDTAVTVAQNATNQDIADAINAEIATTE 299
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
++T K + D + + S+ +
Sbjct: 300 AATAGSTTGMKAELDKDGNVLVTGKDDGTQLDITADFAAASVGDTITIGSTAVVGAAGAI 359
Query: 360 AMEEMVSFIDTQIKCAT 376
+E+ + I
Sbjct: 360 TGQEVTTNGAAAIAEVA 376
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 42/136 (30%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + T + + + + +D+ ++
Sbjct: 380 DIDLSKAKFDVGIETYDLNGAGDEAVNTGTVTTESVASLDLSTAEGAQNAIDVLDSAMEQ 439
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+IG+ +R++ + + + V R+ D D ASE+ ++ Q QQ
Sbjct: 440 VDEKRAEIGAFQNRMNHTMSNLANINENVNASNSRIKDVDFASETINMTKGQILQQAGTS 499
Query: 435 ALSIVNNSTARILSLF 450
L+ LSL
Sbjct: 500 ILAQAKQIPQAALSLL 515
>gi|153825600|ref|ZP_01978267.1| flagellin FlaE [Vibrio cholerae MZO-2]
gi|153828605|ref|ZP_01981272.1| flagellin FlaE [Vibrio cholerae 623-39]
gi|229513795|ref|ZP_04403257.1| flagellin protein FlaF [Vibrio cholerae TMA 21]
gi|229522097|ref|ZP_04411514.1| flagellin protein FlaF [Vibrio cholerae TM 11079-80]
gi|229524145|ref|ZP_04413550.1| flagellin protein FlaF [Vibrio cholerae bv. albensis VL426]
gi|229528844|ref|ZP_04418234.1| flagellin protein FlaF [Vibrio cholerae 12129(1)]
gi|254226372|ref|ZP_04919961.1| flagellin FlaE [Vibrio cholerae V51]
gi|254291381|ref|ZP_04962174.1| flagellin FlaE [Vibrio cholerae AM-19226]
gi|262192269|ref|ZP_06050426.1| flagellin protein FlaF [Vibrio cholerae CT 5369-93]
gi|125621122|gb|EAZ49467.1| flagellin FlaE [Vibrio cholerae V51]
gi|148875876|gb|EDL74011.1| flagellin FlaE [Vibrio cholerae 623-39]
gi|149740751|gb|EDM54850.1| flagellin FlaE [Vibrio cholerae MZO-2]
gi|150422711|gb|EDN14665.1| flagellin FlaE [Vibrio cholerae AM-19226]
gi|229332618|gb|EEN98104.1| flagellin protein FlaF [Vibrio cholerae 12129(1)]
gi|229337726|gb|EEO02743.1| flagellin protein FlaF [Vibrio cholerae bv. albensis VL426]
gi|229341022|gb|EEO06027.1| flagellin protein FlaF [Vibrio cholerae TM 11079-80]
gi|229348976|gb|EEO13933.1| flagellin protein FlaF [Vibrio cholerae TMA 21]
gi|262031879|gb|EEY50460.1| flagellin protein FlaF [Vibrio cholerae CT 5369-93]
gi|327484672|gb|AEA79079.1| Flagellin protein FlaF [Vibrio cholerae LMA3894-4]
Length = 378
Score = 126 bits (315), Expect = 9e-27, Method: Composition-based stats.
Identities = 44/357 (12%), Positives = 97/357 (27%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SA+ A + L + L +R+SSG R++ A D+AA I+ +++ L
Sbjct: 4 TVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLGI 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S + A+ M + ++ +++ + ++Q E+ L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L ++ I S + + L
Sbjct: 124 NRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAALAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + + T +
Sbjct: 184 KQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGQTDKVSASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + N + + V T +
Sbjct: 244 QLYIAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDTALKYVDG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D L + K+ D + + + +
Sbjct: 304 HRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTS 360
Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 44/376 (11%), Positives = 104/376 (27%), Gaps = 11/376 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+A+ ++ A ++++ ++ + + + + G
Sbjct: 13 VAQRHLNSASEMLNQSLERL-----SSGNRINSAKDDAAGLQISNRLETQMRGLGIAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + + ++ + +
Sbjct: 68 ANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ AS I + S +++ + +A
Sbjct: 128 ETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAALADKQWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
S + + DI AT N T + + ++
Sbjct: 188 VTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGQTDKVSASVNEKGQLQLYI 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+T T S + + + + + VS IDT +K
Sbjct: 248 AGKETSGTLSFSGSLANELQMNLLGYEA------VDNLDISSAGGAQRAVSVIDTALKYV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
++G++ +R + + + + R+ DAD A E+T++ Q QQ++
Sbjct: 302 DGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSV 361
Query: 436 LSIVNNSTARILSLFR 451
L+ +L L R
Sbjct: 362 LAQAKRQPKFVLFLLR 377
>gi|114054949|gb|ABI50074.1| FlaA [Clostridium botulinum]
Length = 269
Score = 126 bits (315), Expect = 9e-27, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 76/194 (39%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNLNAMNAXRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ G D ++I++EIT+L +++
Sbjct: 63 SRNSQDSISLIQTAEGALTETHSILQRMRELAVQGTNDTNVTADREAIKTEITELNNEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L I + + T + +
Sbjct: 123 RISQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLSIGDMSAKTLGVSGVSVSXAXXATX 182
Query: 181 TDGTERYGLLDRNH 194
+ T L +
Sbjct: 183 SIXTIDTALGKVST 196
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 38/112 (33%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + + + IDT + + K+G+ +R+ + +
Sbjct: 158 SIGDMSAKTLGVSGVSVSXAXXATXSIXTIDTALGKVSTERAKLGANQNRLXHTINNLNT 217
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ ++ R+ DMA E S Q A L+ N + +L L
Sbjct: 218 SSENLQAAESRVRXVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLL 269
>gi|119715013|ref|YP_921978.1| flagellin domain-containing protein [Nocardioides sp. JS614]
gi|119535674|gb|ABL80291.1| flagellin domain protein [Nocardioides sp. JS614]
Length = 376
Score = 126 bits (315), Expect = 9e-27, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 81/226 (35%), Gaps = 3/226 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A+++ + L + +++SSG R++ AAD+AA +I++ ++S G +
Sbjct: 5 INQNIDALNSYRNLSVTQGQMSKSLEKLSSGYRINRAADDAAGLAISEGLRSQVGGIKVA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
G S V A+ +++ ++ +++ D +IQSE L +L
Sbjct: 65 VRNAQDGVSVVQTAEGALTETHSILQRMRDLSVQAANDSNDVSSRAAIQSENDALVDELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++FN + L + + + + T ++
Sbjct: 125 RIATSTTFNNVSLLDGNYIGKNFQVGYGTGATDSIAVDITSTGTGGAKSTWANGAASTTA 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
T + + + V +I + + + +
Sbjct: 185 AAATFTHNGVATTTGVLVASTDANNIATQLNADANFKTNYTASVDD 230
Score = 116 bits (289), Expect = 9e-24, Method: Composition-based stats.
Identities = 48/372 (12%), Positives = 105/372 (28%), Gaps = 1/372 (0%)
Query: 81 MSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSS-FNGENWLRTDLG 139
+++ ID +++ +N + + + S ++ S +
Sbjct: 5 INQNIDALNSYRNLSVTQGQMSKSLEKLSSGYRINRAADDAAGLAISEGLRSQVGGIKVA 64
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
A SV+ + I L + + + +++
Sbjct: 65 VRNAQDGVSVVQTAEGALTETHSILQRMRDLSVQAANDSNDVSSRAAIQSENDALVDELD 124
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+V G K F++ +GA A G A AA
Sbjct: 125 RIATSTTFNNVSLLDGNYIGKNFQVGYGTGATDSIAVDITSTGTGGAKSTWANGAASTTA 184
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ T + + N + A + V +
Sbjct: 185 AAATFTHNGVATTTGVLVASTDANNIATQLNADANFKTNYTASVDDKGGLVVTSKDGLPG 244
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + + G + + + + + IDT IK + A
Sbjct: 245 AITVSGAGLAGAHVDAAPGANAGFSSTDLGVGALVLDSAANAKAATNAIDTAIKGVSTAR 304
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
K+G++ +R + + + ++ + R+ D DMA+E + + Q Q L+
Sbjct: 305 AKLGAMQNRFEHTINNLSVTQENLSASESRIRDTDMAAEMMQFTRSQILSQAGTAMLAQA 364
Query: 440 NNSTARILSLFR 451
N + +L L R
Sbjct: 365 NQAPQGVLQLLR 376
>gi|121596101|ref|YP_987997.1| flagellin domain-containing protein [Acidovorax sp. JS42]
gi|120608181|gb|ABM43921.1| flagellin domain protein [Acidovorax sp. JS42]
Length = 278
Score = 126 bits (315), Expect = 9e-27, Method: Composition-based stats.
Identities = 46/230 (20%), Positives = 88/230 (38%), Gaps = 3/230 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++++A + L +L R+SSGLRV+ A D++A +IA+ M + +
Sbjct: 1 MAVINTNIASLNAQRNLNTSQASLATSMQRLSSGLRVNSAKDDSAGLAIAERMSAQVRGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQS 117
+ G S A+ + K D + ++ D S+ E L S
Sbjct: 61 NVAIRNANDGVSLSQTAEGALGKVGDSLQRMRELAVQARNSTNSNDDKDSLDKEYQALAS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + G++FNG++ L D G+ T I + D +
Sbjct: 121 EITRVLGGTTFNGKHILGADAGTLTFQIGANTTADDSIDVVTTDMTGDATITAVTGGKID 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+++T T + + + + +K D + IS + +
Sbjct: 181 NTATTATLKTVIDNIDTALKTVNSKRADFGAAQNRFDAVISNLQVSVENQ 230
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 46/138 (33%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + T+ D ++ ++ IDT +K
Sbjct: 141 AGTLTFQIGANTTADDSIDVVTTDMTGDATITAVTGGKIDNTATTATLKTVIDNIDTALK 200
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ G+ +R +++ + R++DAD ASE+ LS Q QQ
Sbjct: 201 TVNSKRADFGAAQNRFDAVISNLQVSVENQSAARSRIMDADFASETANLSRSQILQQAGT 260
Query: 434 QALSIVNNSTARILSLFR 451
++ N +LSL R
Sbjct: 261 AMVAQANQLPQGVLSLLR 278
>gi|114054792|gb|ABI49997.1| FlaA [Clostridium botulinum F str. Langeland]
Length = 273
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 76/194 (39%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ + +++SSGLR++ A D+ A ++I++ M+ L+
Sbjct: 3 INHNLNAMNAHRQMAINTGSNGKAIEKLSSGLRINRAGDDVAGFAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D ++Q E+ +LQ+++
Sbjct: 63 SRNSQDSISLIQTAEGALNETHSILQRMRELAVQSANDTNVKVDRDNLQKEVAELQNEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L S I + G ++ + S
Sbjct: 123 RIASQTQFNTKNLLNGSAKSMVFQIGANKDQVMELTIAGMGTSALKVGSINIGSGKGAKS 182
Query: 181 TDGTERYGLLDRNH 194
G N
Sbjct: 183 ISGMIETIDNAINT 196
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 35/88 (39%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
M+ ID I + K+G+ +R+ + + ++ R+ D DMA E +
Sbjct: 186 MIETIDNAINTVSGERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFT 245
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A L+ N + +L L R
Sbjct: 246 KTNILTQAAQAMLAQANQAPQGVLQLLR 273
>gi|312884923|ref|ZP_07744613.1| flagellin [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367400|gb|EFP94962.1| flagellin [Vibrio caribbenthicus ATCC BAA-2122]
Length = 378
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 53/375 (14%), Positives = 113/375 (30%), Gaps = 7/375 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + LE +R+SSG R++ A D+AA I+ + + L
Sbjct: 4 TVNTNVSAMTAQRYLSSASKMLEQSLERLSSGNRINSAKDDAAGLQISNRLTTQMRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
G S + A+ MS+ ++ +++ ++Q E+T L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMSETTQILQRMRDLSLQSANGSNSRSERIALQEEMTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L +S I S S +
Sbjct: 124 NRIAETTSFGGRKLLNGTFATSAFQIGASSGESVLVSLKNMRSDDINMGGFSYLAANRLD 183
Query: 180 STDG----TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
+ + + + + + + + T + + + S +
Sbjct: 184 KSWQVQGGKNQLVMEYTDVNNQQKVLTIDAKVGDDIEELATYINGQNQEVSASVNQDQQL 243
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
+ + T+ A G + + R +
Sbjct: 244 QIYLEGSLTSGTLSFSGSLASELGMGLIGYEAVDNIDITDVGGAQRAVAIIDTALKYVDS 303
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
N + N + S + KD ++ + + + + +
Sbjct: 304 HRAELGAMQNRFNHSINNLSNINENLSASNSRIKDTDYAKETTQLVKQQILQQVSTSILA 363
Query: 356 NEKLAMEEMVSFIDT 370
K + ++ +D
Sbjct: 364 QAKQQPDLVLKLLDA 378
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 39/375 (10%), Positives = 95/375 (25%), Gaps = 11/375 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
A+ +S A ++ ++ + + + +
Sbjct: 13 TAQRYLSSASKMLEQSLERL-----SSGNRINSAKDDAAGLQISNRLTTQMRGLDVAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + + +S ++ + +
Sbjct: 68 ANDGISIMQTAE------GAMSETTQILQRMRDLSLQSANGSNSRSERIALQEEMTALND 121
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
++ A++ + L + +
Sbjct: 122 ELNRIAETTSFGGRKLLNGTFATSAFQIGASSGESVLVSLKNMRSDDINMGGFSYLAANR 181
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
G ++ D V + T G A V
Sbjct: 182 LDKSWQVQGGKNQLVMEYTDVNNQQKVLTIDAKVGDDIEELATYINGQNQEVSASVNQDQ 241
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+L S + + L + + + V+ IDT +K
Sbjct: 242 QLQIYLEGSLTSGTLSFSGSLASELGMGLIGYEAVDNIDITDVGGAQRAVAIIDTALKYV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ ++G++ +R + + + + + + R+ D D A E+T+L Q QQ++
Sbjct: 302 DSHRAELGAMQNRFNHSINNLSNINENLSASNSRIKDTDYAKETTQLVKQQILQQVSTSI 361
Query: 436 LSIVNNSTARILSLF 450
L+ +L L
Sbjct: 362 LAQAKQQPDLVLKLL 376
>gi|298736295|ref|YP_003728821.1| flagellin A [Helicobacter pylori B8]
gi|171472178|gb|ACB46842.1| FlaA [Helicobacter pylori]
gi|298355485|emb|CBI66357.1| flagellin A [Helicobacter pylori B8]
Length = 510
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 68/505 (13%), Positives = 145/505 (28%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N +V + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS---------------------------- 272
Q+ ++ + + + S + +
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLRSIDG 304
Query: 273 ------VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + TK S AK N D++
Sbjct: 305 RGIEIKTDSVGNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFT 364
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-ATAAAGKI--- 382
+ ++ + +++ + + T G +
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGSGVTTLRGAMVVI 424
Query: 383 ---GSISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
S + + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|154710451|gb|ABS84292.1| FlkA [Escherichia coli]
Length = 556
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 51/371 (13%), Positives = 109/371 (29%), Gaps = 6/371 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
S G S + +S+ + + ++ D SIQ+EITQ ++
Sbjct: 64 ASRNANDGISIAQTTEGALSEINNNLQRVRELSVQATNGTNSPSDLDSIQNEITQRLEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF---IRDDNGKVQITTIDYYLDPETVL 176
++ + FNG L +D + A + +T +
Sbjct: 124 NRVSGQTQFNGVKVLASDNSMTIQVGANDGEAITIDLKEITAETLGLTGFNVNGKGSVNN 183
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
++ G + ++ + + T +G +N
Sbjct: 184 TVATAKDLTDKGFISTDNGKTYTGSAGLANAKAGDVFGKMVDTGTVTTTIDNGFGTAQSN 243
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
+ AA + + ++ I + + + K +
Sbjct: 244 TYKYDKASNSFSFDIDDAAGTTAPQVATYLNPTANDKTKASVEINGSSQAVIIDHNGKMT 303
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
D + + ++ TL++ ++ + A +
Sbjct: 304 AADDNAELFIDNSGNLTKNNKTGGKAATLENLALNKTGTNTAVKSSITTESGTKIAIAGS 363
Query: 357 EKLAMEEMVSF 367
+S
Sbjct: 364 TDGTTAGKISA 374
Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/259 (14%), Positives = 80/259 (30%)
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
++ ++ + + K AT L I T
Sbjct: 298 HNGKMTAADDNAELFIDNSGNLTKNNKTGGKAATLENLALNKTGTNTAVKSSITTESGTK 357
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A + + T+ S + ++ ++ + +T ++
Sbjct: 358 IAIAGSTDGTTAGKISATNVKISAEDLKAKADTAGFTTSTGFTVAAGGDQKATLNGSEAY 417
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++T ++ + + + TDA E + ++ +D +
Sbjct: 418 VKGDGFTIDNTAKYYVQEDGAITNGSGKVAYKDADGKITTDAKTETAKTTDPMAKLDKAL 477
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A +G+I +R + + + R+ DAD A+E + +S Q QQ
Sbjct: 478 AKVDALRSDLGAIQNRFDSTITNLGNTVNNLTSARSRIEDADYATEVSNMSRAQILQQAG 537
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N +T +LSL R
Sbjct: 538 TSVLAQANQTTQNVLSLLR 556
>gi|297582042|ref|ZP_06943961.1| flagellin FlaE [Vibrio cholerae RC385]
gi|297533737|gb|EFH72579.1| flagellin FlaE [Vibrio cholerae RC385]
Length = 378
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 44/357 (12%), Positives = 97/357 (27%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SA+ A + L + L +R+SSG R++ A D+AA I+ +++ L
Sbjct: 4 TVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLGI 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S + A+ M + ++ +++ + ++Q E+ L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L ++ I S + + L
Sbjct: 124 NRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLDMGGFSYVAAALAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + + T +
Sbjct: 184 KQWQVTKGKQQLNISYVNAQGENENIQIQAKDGDDIEELATYINGQTDKVSASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + + N + + V T +
Sbjct: 244 QLYIAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDTALKYVDG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D L + K+ D + + + +
Sbjct: 304 HRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTS 360
Score = 99.8 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 44/376 (11%), Positives = 104/376 (27%), Gaps = 11/376 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+A+ ++ A ++++ ++ + + + + G
Sbjct: 13 VAQRHLNSASEMLNQSLERL-----SSGNRINSAKDDAAGLQISNRLETQMRGLGIAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + + ++ + +
Sbjct: 68 ANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ AS I + S +++ + +A
Sbjct: 128 ETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLDMGGFSYVAAALADKQWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
S + + DI AT N T + + ++
Sbjct: 188 VTKGKQQLNISYVNAQGENENIQIQAKDGDDIEELATYINGQTDKVSASVNEKGQLQLYI 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+T T S + + + + + VS IDT +K
Sbjct: 248 AGKETSGTLSFSGSLANELQMNLLGYEA------VDNLDISSAGGAQRAVSVIDTALKYV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
++G++ +R + + + + R+ DAD A E+T++ Q QQ++
Sbjct: 302 DGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSV 361
Query: 436 LSIVNNSTARILSLFR 451
L+ +L L R
Sbjct: 362 LAQAKRQPKFVLFLLR 377
>gi|291537844|emb|CBL10955.1| Flagellin and related hook-associated proteins [Roseburia
intestinalis XB6B4]
Length = 541
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 56/299 (18%), Positives = 109/299 (36%), Gaps = 3/299 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N SAM+A++ L +++SSG +++ AAD+AA SI++ M+S L+
Sbjct: 4 VVQHNMSAMNANRNLGVTTGMQAKSSEKLSSGYKINRAADDAAGLSISEKMRSQIRGLNK 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
SD G S + A+ ++++ ++ ++ D +++Q+E++QLQ +L
Sbjct: 64 ASDNAQDGISLIQTAEGALNESHSILQRMRELSVQAANGTETDDDREAVQNEVSQLQEEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FN L ST+S + +T+ + T +
Sbjct: 124 TRISETTEFNTMKLLDGSQSGSTSSTGSGPKFGVVDATLDGALVTSNVKGIKVATAAATT 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G E + + K D + ++ AT + A +K +
Sbjct: 184 TKAGQETAIWAADGKTLTLNLSKNKVYTQDEIDDLIANAKQEDSSATGAPAEVKVSLKNG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
T + A + GT + S T + G K
Sbjct: 244 IFNADADTTAGTVTAGGVKAVSDEGTVTGFVGADTISFTANKYGAEFNDTVFKFKFDKA 302
Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats.
Identities = 49/361 (13%), Positives = 98/361 (27%), Gaps = 6/361 (1%)
Query: 91 IKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVI 150
+ + T + ++ Q ++ D+ + + + K +
Sbjct: 187 GQETAIWAADGKTLTLNLSKNKVYTQDEIDDLIANAK------QEDSSATGAPAEVKVSL 240
Query: 151 GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
+ I + + T+ + T + +K E
Sbjct: 241 KNGIFNADADTTAGTVTAGGVKAVSDEGTVTGFVGADTISFTANKYGAEFNDTVFKFKFD 300
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
A + + A T A G L S +
Sbjct: 301 KAAGKEEVETNTAIEIDGANAVTAGEYTIHLAAGKEYTAEDLEDVLKTAGFDFDVKLSGN 360
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ + G S + + + G T++ + G T +
Sbjct: 361 TPDEPNTLFATSGASTVTDITMGAGTTGAGLGSTDAMWGQAGYDSVSSGAGITLQIGANE 420
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
S M + N + + ++ ID IK +A G++G+I +R+
Sbjct: 421 GQTMSFSIDDMSARALGVDGNKVDLSTQAGAQKATDTIDAAIKKVSAQRGRMGAIQNRLE 480
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + R+ D DMA E S Q L+ N ST +LSL
Sbjct: 481 HTISNLDTAAENTQTAESRIRDTDMAEEMVEYSKNNILAQAGQSMLAQANQSTQGVLSLL 540
Query: 451 R 451
+
Sbjct: 541 Q 541
>gi|228926796|ref|ZP_04089864.1| Flagellin [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
gi|228832909|gb|EEM78478.1| Flagellin [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
Length = 384
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 49/441 (11%), Positives = 115/441 (26%), Gaps = 57/441 (12%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R+++A+D+AA +IA M++
Sbjct: 1 MRTQEYMRQNQTKMSNAMDRLSSGKRINNASDDAAGLAIATRMRAR-------------- 46
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ G+ A + + I A + +
Sbjct: 47 -------ENGLGVAANNTQDGMSLI-------------------------RTADSAMNSV 74
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
N L + S + + + + + + +
Sbjct: 75 SNILLRMRDLANQSANGTNTDDNQKALDKEFSALKEQIDYISKNTEFNDKKLLNGENKTI 134
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
+ I+ + L + T D K
Sbjct: 135 AIQTLDNADTT-----------KQININLADSSTSALQIDKLTISGKTTDTTKTQTITVT 183
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
A + K+ + + + G+ S
Sbjct: 184 DDEIKAAKTDIDEFNDAKKALADLKAESAPSKGDGSSDDEIKEAVSNFKKSFEKIQKFMN 243
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ + L K G + + + + + + ID
Sbjct: 244 DSDIKTVQTEIEKFDAAAPALDKAKGMGIAFTSAMDPKAGTITKAATRQNASDAIKSIDA 303
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
++ + +G+ +R+ + +K ++ ++ DADMA E + ++ + +
Sbjct: 304 ALETIASNRATLGATLNRLDFNVNNLKSQSSSMAAAASQIEDADMAKEMSEMTKFKILNE 363
Query: 431 LAVQALSIVNNSTARILSLFR 451
+ LS N + + L +
Sbjct: 364 AGISMLSQANQTPQMVSKLLQ 384
>gi|240146660|ref|ZP_04745261.1| flagellin [Roseburia intestinalis L1-82]
gi|257201204|gb|EEU99488.1| flagellin [Roseburia intestinalis L1-82]
Length = 541
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 56/299 (18%), Positives = 109/299 (36%), Gaps = 3/299 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N SAM+A++ L +++SSG +++ AAD+AA SI++ M+S L+
Sbjct: 4 VVQHNMSAMNANRNLGVTTGMQAKSSEKLSSGYKINRAADDAAGLSISEKMRSQIRGLNK 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
SD G S + A+ ++++ ++ ++ D +++Q+E++QLQ +L
Sbjct: 64 ASDNAQDGISLIQTAEGALNESHSILQRMRELSVQAANGTETDDDREAVQNEVSQLQEEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FN L ST+S + +T+ + T +
Sbjct: 124 TRISETTEFNTMKLLDGSQSGSTSSTGSGPKFGVVDATLDGALVTSNVKGIKVATAAATT 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G E + + K D + ++ AT + A +K +
Sbjct: 184 TKAGQETAIWAADGKTLTLNLSKNKVYTQDEIDDLIANAKQEDSSATGAPAEVKVSLKNG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
T + A + GT + S T + G K
Sbjct: 244 IFNADADTTAGTVTAGGVKAVSDEGTVTGFVGADTISFTANKYGAEFNDTVFKFKFDKA 302
Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats.
Identities = 49/361 (13%), Positives = 98/361 (27%), Gaps = 6/361 (1%)
Query: 91 IKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVI 150
+ + T + ++ Q ++ D+ + + + K +
Sbjct: 187 GQETAIWAADGKTLTLNLSKNKVYTQDEIDDLIANAK------QEDSSATGAPAEVKVSL 240
Query: 151 GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
+ I + + T+ + T + +K E
Sbjct: 241 KNGIFNADADTTAGTVTAGGVKAVSDEGTVTGFVGADTISFTANKYGAEFNDTVFKFKFD 300
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
A + + A T A G L S +
Sbjct: 301 KAAGKEEVETNTAIEIDGANAVTAGEYTIHLAAGKEYTAEDLEDVLKTAGFDFDVKLSGN 360
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ + G S + + + G T++ + G T +
Sbjct: 361 TPDEPNTLFATSGASTVTDITMGAGTAGAGLGSTDAMWGQAGYDSVSSGAGITLQIGANE 420
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
S M + N + + ++ ID IK +A G++G+I +R+
Sbjct: 421 GQTMSFSIDDMSARALGVDGNKVDLSTQAGAQKATDTIDAAIKKVSAQRGRMGAIQNRLE 480
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + R+ D DMA E S Q L+ N ST +LSL
Sbjct: 481 HTISNLDTAAENTQTAESRIRDTDMAEEMVEYSKNNILAQAGQSMLAQANQSTQGVLSLL 540
Query: 451 R 451
+
Sbjct: 541 Q 541
>gi|114054943|gb|ABI50071.1| FlaA [Clostridium botulinum]
Length = 265
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 76/194 (39%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 1 INHNLNAMNARRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ G D ++I++EIT+L +++
Sbjct: 61 SRNSQDSISLIQTAEGALTETHSILQRMRELAVQGTNDTNVTADREAIKTEITELNNEIN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L I + + T + +
Sbjct: 121 RISQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLSIGDMSAKTLGVSGVSVSXAXXATD 180
Query: 181 TDGTERYGLLDRNH 194
+ T L +
Sbjct: 181 SIXTIDTALGKVST 194
Score = 75.5 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 38/110 (34%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + + + + IDT + + K+G+ +R+ + +
Sbjct: 156 SIGDMSAKTLGVSGVSVSXAXXATDSIXTIDTALGKVSTERAKLGANQNRLXHTINNLNT 215
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ ++ R+ DMA E S Q A L+ N + +L
Sbjct: 216 SSENLQAAESRVRXVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQ 265
>gi|118443152|ref|YP_877955.1| flagellin protein FliB(A) [Clostridium novyi NT]
gi|118133608|gb|ABK60652.1| flagellin protein FliB(A) [Clostridium novyi NT]
Length = 270
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 3/153 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRMMGQNITGAGKAMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D ++Q E+TQLQS+L
Sbjct: 63 SRNAQDGISLIQTAEGALNETHAILQRMRELAVQTSNDTNTTADRINVQKEVTQLQSELT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
I+ + FN + L T + + +
Sbjct: 123 RISTDTEFNTKKLLNGSAKGVTFQVGANQGQTI 155
Score = 77.9 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 53/172 (30%), Gaps = 2/172 (1%)
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
+ R + +T + S + + + +
Sbjct: 99 NDTNTTADRINVQKEVTQLQSELTRISTDTEFNTKKLLNGSAKGVTFQVGANQGQTIAVD 158
Query: 342 VTLNITR--HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
++ N + + +E ++ I+ I + +GSI +R+ +
Sbjct: 159 ISEMSASALKVNDVSLSSGAKSQEAITKINDAINTVSGERATLGSIQNRLEHTINSDNNA 218
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA E S QQ A L+ N +L L R
Sbjct: 219 AENLQAAESRVRDVDMAKEMMEFSKKNILQQAAQAMLAQANQQPQGVLQLLR 270
>gi|261838156|gb|ACX97922.1| flagellin A [Helicobacter pylori 51]
Length = 510
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 65/505 (12%), Positives = 139/505 (27%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQANSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N +V + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR------------------- 281
Q+ ++ + + + S + + + T
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLRSIDG 304
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
G + S + N T +
Sbjct: 305 RGIEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFT 364
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-----ATAAAGKIGS------------ 384
N + + + + + +G+
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGAGVTTLRGAMVVI 424
Query: 385 -----ISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
+ + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|188590609|ref|YP_001920181.1| flagellin [Clostridium botulinum E3 str. Alaska E43]
gi|251780247|ref|ZP_04823167.1| flagellin [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|188500890|gb|ACD54026.1| flagellin [Clostridium botulinum E3 str. Alaska E43]
gi|243084562|gb|EES50452.1| flagellin [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 270
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 72/181 (39%), Gaps = 3/181 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNMNAMNAHRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ G D +I++EIT+L +++
Sbjct: 63 SRNSQDSISLIQTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L I + + T + +
Sbjct: 123 RISQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLTIGDMSAKTLGVSGVSVSDASKATD 182
Query: 181 T 181
+
Sbjct: 183 S 183
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 42/111 (37%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T + + ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 160 GDMSAKTLGVSGVSVSDASKATDSIATIDKALGTVSTERAKLGANQNRLEHTINNLNTSS 219
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA E S Q A L+ N + +L L R
Sbjct: 220 ENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLLR 270
>gi|43632|emb|CAA43148.1| flagellin [Helicobacter pylori]
Length = 510
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 69/505 (13%), Positives = 146/505 (28%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSELTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N +V + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG----------------- 283
Q+ ++ + + + S + + + T
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLRSIDG 304
Query: 284 -----------------NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ TK S AK N D++
Sbjct: 305 RGIEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFT 364
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-ATAAAGKI--- 382
+ ++ + +++ + + T G +
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGSGVTTLRGAMVVI 424
Query: 383 ---GSISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
S + + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|261252312|ref|ZP_05944885.1| flagellin protein FlaD [Vibrio orientalis CIP 102891]
gi|260935703|gb|EEX91692.1| flagellin protein FlaD [Vibrio orientalis CIP 102891]
Length = 377
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 48/365 (13%), Positives = 113/365 (30%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNSANNAQQTSMERLSSGSKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + N + +
Sbjct: 124 NRIAETTSFGGNKLLNGTFGTKSMQIGADNGEAVMLSLNNMRSDDSKMGGQSFQAATAKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S+ + + + T +
Sbjct: 184 SSWTVAAGANDLTVNLTDTDGVAQTITINAKEGDDIEELATYINGQTDMVKASVNEDGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + + S + + T + + + ++ S
Sbjct: 244 QVFAGADKVDGAVSFSGGLAGELSMGAATNVTVDTIDVTSVGGAQESVGIIDAALKNVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D L ++ + + +
Sbjct: 304 HRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/362 (10%), Positives = 94/362 (25%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + S S+I + + + N ++ +
Sbjct: 15 QRYLNSANNAQQTSMERLSSGSKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + N + A + T + +
Sbjct: 135 NKLLNGTFGTKSMQIGADNGEAVMLSLNNMRSDDSKMGGQSFQAATAKDSSWTVAAGAND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + + + T G T+ A V
Sbjct: 195 LTVNLTDTDGVAQTITINAKEGDDIEELATYINGQTDMVKASVNEDGQLQVFAGADKVDG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G + +T +E V ID +K + ++G+ +R
Sbjct: 255 AVSFSGGLAGELSMGAATNVTVDTIDVTSVGGAQESVGIIDAALKNVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + + V R+ D D A E+T L+ Q Q + L+ + LS
Sbjct: 315 FNHAINNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSILAQAKQAPNSALS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|51989334|gb|AAU21201.1| FlaA [Helicobacter pylori]
Length = 510
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 69/505 (13%), Positives = 146/505 (28%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N +V + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG----------------- 283
Q+ ++ + + + S + + + T
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLRSIDG 304
Query: 284 -----------------NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ TK S AK N D++
Sbjct: 305 RGIEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFT 364
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-ATAAAGKI--- 382
+ ++ + +++ + + T G +
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGSGVTTLRGAMVVI 424
Query: 383 ---GSISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
S + + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILVQSGSYAMSQANTVQQNILRLL 509
>gi|496298|gb|AAA93096.1| thermoregulated motility protein [Yersinia enterocolitica (type
O:8)]
Length = 364
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 76/222 (34%), Gaps = 3/222 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + T
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTKTDSSYDFRRSKDNEQISIGDWCKFWLESGDRADGTSSD 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
+T + LD V A +T
Sbjct: 181 TVNTYAFTKKAALDTAQTDYDTANTAYLAAVKSGVAGDITTT 222
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 38/97 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ K ++ ID +K +G+ +R + + + R+ DAD
Sbjct: 268 ADGKATGTTPLADIDKALKAVDTQRSVLGASQNRFESTITNLNNTVNNLTSARSRIQDAD 327
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++E + +S Q QQ L+ N +LSL R
Sbjct: 328 YSTEVSNMSRAQILQQAGTSVLAQANQVPQTVLSLLR 364
>gi|261839570|gb|ACX99335.1| flagellin A [Helicobacter pylori 52]
Length = 510
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 69/505 (13%), Positives = 146/505 (28%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N +V + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG----------------- 283
Q+ ++ + + + S + + + T
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLRSIDG 304
Query: 284 -----------------NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ TK S AK N D++
Sbjct: 305 RGIEIKTDSVSDGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFT 364
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-ATAAAGKI--- 382
+ ++ + +++ + + T G +
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGSGVTTLRGAMVVI 424
Query: 383 ---GSISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
S + + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|210134803|ref|YP_002301242.1| flagellin A [Helicobacter pylori P12]
gi|210132771|gb|ACJ07762.1| flagellin A [Helicobacter pylori P12]
Length = 510
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 69/505 (13%), Positives = 146/505 (28%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGRFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N +V + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG----------------- 283
Q+ ++ + + + S + + + T
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLRSIDG 304
Query: 284 -----------------NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ TK S AK N D++
Sbjct: 305 RGIEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFT 364
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-ATAAAGKI--- 382
+ ++ + +++ + + T G +
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGSGVTTLRGAMVVI 424
Query: 383 ---GSISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
S + + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|290439|gb|AAA23798.1| flagellin [Escherichia coli]
Length = 584
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 3/154 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
++ + FNG N L D A
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGETIT 157
Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 66/208 (31%)
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
V + + TS S S T + +
Sbjct: 377 TYQATVSKDVVLSETKAAAATSSVTFNSGVLSKTIGFTAGESSDAAKSYVDDKGGITNVA 436
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
+ TV+ N T + + + + V +N T+ + A
Sbjct: 437 DYTVSYSVNKDNGSVTVAGYASATDTNKDYAPAIGTAVNVNSAGKITTETTSAGSATTNP 496
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ +D I +G+I +R+ + + + R+ DAD A+E + +S
Sbjct: 497 LAALDDAISSIDKFRSSVGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSK 556
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFRG 452
Q QQ L+ N ++LSL +G
Sbjct: 557 AQIIQQAGSSVLAKANQVPQQVLSLLQG 584
>gi|30059912|gb|AAP13328.1| FliC [Escherichia coli]
Length = 559
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 60/416 (14%), Positives = 119/416 (28%), Gaps = 5/416 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D + + + D T + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMK-IQVGANDGQTITIDLKKIDSDTLGLSGFNVNGKGAVA 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ TE + V+ S +T G+ + A
Sbjct: 183 NAKATEADLTGAGFSQGAVDTNGNSTWTKSTTTNYSAATTADLLSTIKDGSTVTYAGTDT 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + + +G +G+ + + + I + T + +
Sbjct: 243 GLGVAAAGNYTYDANSKSYSFNANGLTGANTATALKGYLGTGANTAKISIGGTEQEVNIA 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G T + S + + V I +
Sbjct: 303 KDGTITDTNGDALYLDITGNLTKNYAGSPPAATLDNVLASATVNATIKFDSGMTVDYTAG 362
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL-VDAD 414
+ + A +GK ++++ + G + DAD
Sbjct: 363 TGANITGASISADDMAAKLSGKAYTVANGAESYDVAAVTGAVTTTAGNSPVYADAD 418
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 54/402 (13%), Positives = 114/402 (28%), Gaps = 5/402 (1%)
Query: 52 IMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSE 111
+ SD LS + + +A ++ A + + + T + +
Sbjct: 162 KIDSDTLGLSGFNVNGKGAVANAKATEADLTGAGFSQGAVDTNGNSTWTKSTTTNYSAAT 221
Query: 112 ITQLQSQLRDIAR-GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL 170
L S ++D + + G+ T G T + YL
Sbjct: 222 TADLLSTIKDGSTVTYAGTDTGLGVAAAGNYTYDANSKSYSFNANGLTGANTATALKGYL 281
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
S GTE+ + ++ I +D++ + A
Sbjct: 282 GTGANTAKISIGGTEQEVNIAKDGTITDTNGDALYLDITGNLTKNYAGSPPAATLDNVLA 341
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVR 290
+ A + ++ +K A + V
Sbjct: 342 SATVNATIKFDSGMTVDYTAGTGANITGASISADDMAAKLSGKAYTVANGAESYDVAAVT 401
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
+ + P Y ++ + V + + S Y ++T A
Sbjct: 402 GAVTTTAGNSPVYADADGKLTTSASNTVTQTYHEFANGNIYDDKGSSLYKAADGSLTSEA 461
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + + +D I +G++ +R+ + + + R+
Sbjct: 462 KGKSEATA----DPLKALDEAISSIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRI 517
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 518 QDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 559
>gi|170755201|ref|YP_001782337.1| flagellin [Clostridium botulinum B1 str. Okra]
gi|114054786|gb|ABI49994.1| FlaA [Clostridium botulinum]
gi|114054788|gb|ABI49995.1| FlaA [Clostridium botulinum]
gi|169120413|gb|ACA44249.1| flagellin [Clostridium botulinum B1 str. Okra]
Length = 276
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + N +++SSGLR++ A D+AA SI++ M++ L+
Sbjct: 3 INHNLNAMNAHRNMGINTGNSAKAMEKLSSGLRINRAGDDAAGLSISEKMRAQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D +IQ E+T L S++
Sbjct: 63 SRNAQDGISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRTAIQEELTSLTSEID 122
Query: 121 DIARGSSFNGENWLRTD 137
IA + FN + L D
Sbjct: 123 RIASTTQFNEKKLLNGD 139
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 39/97 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + I++ IK + K+G+ +R+ + + ++ R+ D D
Sbjct: 180 VADNGTAKASIDSINSAIKSVSTERSKLGAFQNRLEHTIANLDNASENLQAAESRVRDVD 239
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E S QQ A L+ N + +L L R
Sbjct: 240 MAKEMMNFSKNNILQQAAQAMLAQANQAPQGVLQLLR 276
>gi|22553054|emb|CAD42894.1| flagellin [Legionella pneumophila serogroup 6]
Length = 361
Score = 126 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 80/204 (39%), Gaps = 3/204 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++++A + L ++ R+SSGLR++ A D+AA +I+Q M + ++
Sbjct: 4 VINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
G S +A+ M + +++ ++ + SIQSEI+QL+S+L
Sbjct: 64 AVRNANDGISLSQVAEGAMQETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA+ + FNG+ L ++ + + + + T + +
Sbjct: 124 ERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFSIGSIKASSIGGIATATGTEVAGA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVL 203
+ I
Sbjct: 184 AATDITIAIGGGAATSINSSANFT 207
>gi|254508448|ref|ZP_05120568.1| flagellin A [Vibrio parahaemolyticus 16]
gi|219548658|gb|EED25663.1| flagellin A [Vibrio parahaemolyticus 16]
Length = 368
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 66/175 (37%), Gaps = 3/175 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M+A + L +L +R+SSG +++ A D+AA I+ + + + L G
Sbjct: 1 MTAQRYLNKATGDLNTSMERLSSGQQINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSS 127
S A+ M+++ ++ +++ ++ +I E++ LQ +L IA +S
Sbjct: 61 ISIAQTAEGAMNESTAILQRMRDLSLQSANGTNSDSERTAINEEVSALQDELNRIAETTS 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
F G L G ++ I S + I +
Sbjct: 121 FGGRKLLNGTFGEASFQIGASSGEAIIMGLTSIRADDFRMGGQSFISEQGKGKDW 175
Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 32/365 (8%), Positives = 84/365 (23%), Gaps = 2/365 (0%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQL--RDIARGSSFNGENWLRTDLGSSTASIA 146
NK T + + S +I + I+ + ++
Sbjct: 4 QRYLNKATGDLNTSMERLSSGQQINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISI 63
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + +Q DS ++ ++
Sbjct: 64 AQTAEGAMNESTAILQRMRDLSLQSANGTNSDSERTAINEEVSALQDELNRIAETTSFGG 123
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ G S + + + + D G + +
Sbjct: 124 RKLLNGTFGEASFQIGASSGEAIIMGLTSIRADDFRMGGQSFISEQGKGKDWGVPANARD 183
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + + + +++
Sbjct: 184 LKLEFTGKDGDLVTIDILAKDGDDIEELATYINGQTDLVKASVDEEGKLQLFASQAELKS 243
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + + V ID+ ++ + +G+
Sbjct: 244 DLSISGGLAGELGLNGGPGVQTTVQSIDVRSVGGAQNAVGIIDSALQYVDSQRADLGAKQ 303
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R+ + + +++ VE R+ D D A E+T ++ Q QQ L+
Sbjct: 304 NRLSHSINNLANIQENVEASNSRIRDTDFAKETTAMTKAQILQQAGTSILAQAKQLPNSA 363
Query: 447 LSLFR 451
+SL +
Sbjct: 364 MSLLQ 368
>gi|82702466|ref|YP_412032.1| flagellin-like [Nitrosospira multiformis ATCC 25196]
gi|82410531|gb|ABB74640.1| Flagellin-like protein [Nitrosospira multiformis ATCC 25196]
Length = 388
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 78/203 (38%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A + L L R+SSGLR++ A D+AA +I++ M S +
Sbjct: 5 INTNVISMNAQRNLNGSQNALATTLQRLSSGLRINSAKDDAAGLAISERMTSQIKGFTQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
G S A+ + + + + I+ +D ++ +E+ QL++++
Sbjct: 65 IRNANDGISMSQTAEGALGEIGNNLQRIRELAVQSRNASNSASDRTALNNEVQQLKAEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A ++FNG L + + +V + Q + + T + +
Sbjct: 125 RVASTTTFNGIKLLDGTFTNQDFQVGANVGETINIASIVNAQSSALGTTTTYSTTVTGVA 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
G +K+ +
Sbjct: 185 ATGFATPADDIAAGDLKINGVDV 207
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 44/98 (44%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ++ +D+ + AA +G+ +R ++ + + + R++DAD
Sbjct: 291 IDTTADADTAIASMDSALSALNAARADLGAYQNRFTSAVANLQTVSENLSASRSRIMDAD 350
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
A+E+ LS Q QQ L+ N +LSL RG
Sbjct: 351 FAAETAALSRNQVLQQAGTAMLAQANAMPQSVLSLLRG 388
>gi|307718466|ref|YP_003873998.1| flagellar filament 33 kDa core protein, class B [Spirochaeta
thermophila DSM 6192]
gi|306532191|gb|ADN01725.1| flagellar filament 33 kDa core protein, class B [Spirochaeta
thermophila DSM 6192]
gi|315187004|gb|EFU20761.1| flagellin domain protein [Spirochaeta thermophila DSM 6578]
Length = 285
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 3/174 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM A ++ ++ +L +++SSGLR++ AAD+AA +I++ M+S L
Sbjct: 3 INHNLSAMFAQRQHGIVDLDLSKNMEKLSSGLRITRAADDAAGLAISEKMRSQIRGLKQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S G S + A+ + D++ ++ D IQ E++QL ++
Sbjct: 63 SRNAQDGISFIQTAEGFLQNTQDILQRLRELAVQAANGIYSEEDRMQIQVEVSQLVDEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
IA + FNG N L + F N + +
Sbjct: 123 RIASHAQFNGMNLLTGRFAREEGENVVTASIWFHIGANMDQRERVYIGTMTAAA 176
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 51/165 (30%)
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
+I A+ + + N + + I + +
Sbjct: 120 EIDRIASHAQFNGMNLLTGRFAREEGENVVTASIWFHIGANMDQRERVYIGTMTAAALQM 179
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ + + + ID +K +G+ +R+ + + + ++
Sbjct: 180 KNADNTPISLADPESANRAIGVIDLALKKVNKQRADLGAYQTRLEHAMKGLDIGAENLQA 239
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R+ D +MA+E + Q Q + L+ N T +L LF
Sbjct: 240 AESRIRDLNMAAEMVDYTKNQILLQASTAMLAQANTKTQSVLQLF 284
>gi|261209880|ref|ZP_05924181.1| flagellin protein FlaF [Vibrio sp. RC341]
gi|260841066|gb|EEX67591.1| flagellin protein FlaF [Vibrio sp. RC341]
Length = 378
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 45/357 (12%), Positives = 97/357 (27%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SA+ A + L + L R+SSG R++ A D+AA I+ +++ LS
Sbjct: 4 TVNTNVSALVAQRHLNSASEMLNQSLGRLSSGNRINSAKDDAAGLQISNRLETQMRGLSI 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S + A+ M + ++ +++ D ++Q E+ L +L
Sbjct: 64 AVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAADRTALQEEMAALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L ++ I S + + +
Sbjct: 124 NRIAETTSFAGRKLLNGQFVKASFQIGASSGEAVQLSLRNMRSDSLDMGGFSYVAAAMAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + + + T +
Sbjct: 184 KKWQVAKGKQQLNINYVNAQGENENIQIQAKEGDDIEELATYINGQTDKVSASVNEKGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
L + N + + V T +
Sbjct: 244 QLYIAGKETSGTLAFGGSLANELQLNLLGYEAVDNLDISSAGGAQRAVSVIDTALKYVDG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + +D L + K+ D + + + +
Sbjct: 304 HRSELGAMQNRFHHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTS 360
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/376 (11%), Positives = 105/376 (27%), Gaps = 11/376 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+A+ ++ A ++++ ++ + + + +
Sbjct: 13 VAQRHLNSASEMLNQSLGRL-----SSGNRINSAKDDAAGLQISNRLETQMRGLSIAVRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + + ++ + +
Sbjct: 68 ANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAADRTALQEEMAALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ AS I + S +++ + +A
Sbjct: 128 ETTSFAGRKLLNGQFVKASFQIGASSGEAVQLSLRNMRSDSLDMGGFSYVAAAMADKKWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A + + + DI AT N T + + ++
Sbjct: 188 VAKGKQQLNINYVNAQGENENIQIQAKEGDDIEELATYINGQTDKVSASVNEKGQLQLYI 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+T T + + L + + + VS IDT +K
Sbjct: 248 AGKETSGTL------AFGGSLANELQLNLLGYEAVDNLDISSAGGAQRAVSVIDTALKYV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
++G++ +R H + + + + R+ DAD A E+T++ Q QQ++
Sbjct: 302 DGHRSELGAMQNRFHHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSV 361
Query: 436 LSIVNNSTARILSLFR 451
L+ +L L R
Sbjct: 362 LAQAKRQPKFVLFLLR 377
>gi|254519427|ref|ZP_05131483.1| flagellin protein FliB(S) [Clostridium sp. 7_2_43FAA]
gi|226913176|gb|EEH98377.1| flagellin protein FliB(S) [Clostridium sp. 7_2_43FAA]
Length = 381
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 49/355 (13%), Positives = 107/355 (30%), Gaps = 3/355 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++A + + N +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNMNALNAHRNMTGNTVNSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKS---IQSEITQLQSQLR 120
S G S + A+ +++ + I+ + IQ EITQL +++
Sbjct: 63 SRNAQDGISLIQTAEGALTETHSMAQRIRELAVQANNGTNNDDDLSEIQKEITQLNAEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + FN + L LG A + ++ + L +S
Sbjct: 123 RVAEKTEFNTKTLLTGKLGVKAADGSVTMDNLKAAGISVDAGGVKTGSTLTFTLDGKNSI 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ ++ D D S + K T +
Sbjct: 183 SVSDGTTTQKIAIDPEAIKAGQTLDFDKIGLKMSFSADVNLSNGVGGDTISAKNITTTGN 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ N ++ G + + + + ++ K +
Sbjct: 243 NTSFQIGANSATTLDISINNMSADALGKGASGRVTDLSKVNVTSAGAGFDENIKVIDQAI 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
+ + T + S ++L + + + +
Sbjct: 303 KEVSAQRSQLGAWQNRLEHTINNLNTSSENLTAAESRVRDVDMAKEMMNFSKNNI 357
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/318 (12%), Positives = 76/318 (23%)
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
G S A+ + ++ L +
Sbjct: 64 RNAQDGISLIQTAEGALTETHSMAQRIRELAVQANNGTNNDDDLSEIQKEITQLNAEITR 123
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
K E + + + S L + T +
Sbjct: 124 VAEKTEFNTKTLLTGKLGVKAADGSVTMDNLKAAGISVDAGGVKTGSTLTFTLDGKNSIS 183
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+ + N + D + N
Sbjct: 184 VSDGTTTQKIAIDPEAIKAGQTLDFDKIGLKMSFSADVNLSNGVGGDTISAKNITTTGNN 243
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T + + S T D+ + +T + + + +E + ID IK
Sbjct: 244 TSFQIGANSATTLDISINNMSADALGKGASGRVTDLSKVNVTSAGAGFDENIKVIDQAIK 303
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+A ++G+ +R+ + + + + R+ D DMA E S Q A
Sbjct: 304 EVSAQRSQLGAWQNRLEHTINNLNTSSENLTAAESRVRDVDMAKEMMNFSKNNILSQAAQ 363
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +L L R
Sbjct: 364 AMLAQANQQPQGVLQLLR 381
>gi|217033548|ref|ZP_03438977.1| hypothetical protein HP9810_905g67 [Helicobacter pylori 98-10]
gi|216944073|gb|EEC23504.1| hypothetical protein HP9810_905g67 [Helicobacter pylori 98-10]
gi|315586714|gb|ADU41095.1| flagellin A [Helicobacter pylori 35A]
Length = 510
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 68/505 (13%), Positives = 146/505 (28%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQANSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N ++ + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKISSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG----------------- 283
Q+ ++ + + + S + + + T
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLRSIDG 304
Query: 284 -----------------NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ TK S AK N D++
Sbjct: 305 RGIEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFT 364
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-ATAAAGKI--- 382
+ ++ + +++ + + T G +
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGSGVTTLRGAMVVI 424
Query: 383 ---GSISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
S + + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|125974721|ref|YP_001038631.1| flagellin-like protein [Clostridium thermocellum ATCC 27405]
gi|125714946|gb|ABN53438.1| flagellin-like protein [Clostridium thermocellum ATCC 27405]
Length = 272
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/256 (14%), Positives = 85/256 (33%), Gaps = 3/256 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A +A ++L+ E +++SSG R++ A D+AA SI++ M++ L
Sbjct: 3 INNNIMAYNAHRQLKVNASAQEKSLEKLSSGYRINRAGDDAAGLSISEKMRAQIRGLQMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D +IQ E+ +L +++
Sbjct: 63 SKNAQDGISLIQTAEGALTETHAILQRMRELAVQAANDTNVTKDRSAIQLELNELAAEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN + L I + + + + D +
Sbjct: 123 RIGETTQFNTQKLLDGTFSGRVLQIGANKGETLSIEIGDMTATALHVNADNLSVETSDDA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D E + K + + + + + + + + A +
Sbjct: 183 QDTIELVDQAINIVSGERAKLGAKQNRLEHTIKNLDTAAENLQASESRIRDVDMAQEMMN 242
Query: 241 QAKGIATIPVPLPAAP 256
K +
Sbjct: 243 FTKNNILNQAAIAMLA 258
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 39/102 (38%)
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
+A+ + ++ + +D I + K+G+ +R+ + + ++
Sbjct: 170 NADNLSVETSDDAQDTIELVDQAINIVSGERAKLGAKQNRLEHTIKNLDTAAENLQASES 229
Query: 409 RLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R+ D DMA E + Q A+ L+ N +L L
Sbjct: 230 RIRDVDMAQEMMNFTKNNILNQAAIAMLAQANQVPQGVLQLL 271
>gi|109947905|ref|YP_665133.1| flagellin A [Helicobacter acinonychis str. Sheeba]
gi|109715126|emb|CAK00134.1| flagellin A [Helicobacter acinonychis str. Sheeba]
Length = 510
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 67/505 (13%), Positives = 135/505 (26%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKI-------------------KVEPQVLKDIDVSVYDASGTISTKK 221
+ N + + + T T
Sbjct: 185 DISLTFKQVDGVNDVTLESVKISSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSDTAV 244
Query: 222 FKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR 281
+ + + K + + A A + T + + +
Sbjct: 245 QSGSVNNLTLNGIHLGSIVDVKKNDSDGRLVAAINAVTSETGVEAYTDQNGRLNLRSLDG 304
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
G + S + N T +
Sbjct: 305 RGIEIKTDSVSDGPSALTMVNGGQDLTQGSMNYGRLSLTRLDAKSINVVSASDSQHLGFT 364
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC----------------ATAAAGKI--- 382
N + + + + + T G +
Sbjct: 365 AIGFGESQVAETTVNLRDVTGKFDANVKSASGANYNAVIASGNQSLGSGVTTLRGAMVVI 424
Query: 383 ---GSISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
S + + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|30059888|gb|AAP13316.1| FliC [Escherichia coli]
Length = 557
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 50/365 (13%), Positives = 103/365 (28%), Gaps = 4/365 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR-DDNGKVQITTIDYYLDPETVLLD 178
++ + FNG N L D A I + + ++ + +
Sbjct: 124 DRVSGQTQFNGVNVLSKDGSMKIQVGANDGETITIDLKKIDSDTLNLAGFNVNGAGSVDN 183
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ G + ++ D T + K A +
Sbjct: 184 AKATGKDLTDAGFTASAADANGKITYTKDTVTKFDKATAADVLGKAAAGDSITYAGTDTG 243
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
A +T + T ++ G +I N
Sbjct: 244 LGVAADASTYTYNAANKSYTFDATGVAKADAGTALKGYLGASNTGKINIGGTEQEVNIAK 303
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ A ++ + + L + + + T +++
Sbjct: 304 DGSITDTNGDALYLDSTGNLTKNTANLGAADKATVDKLFAGAQDATITFDSGMTAKFDQT 363
Query: 359 LAMEE 363
+
Sbjct: 364 AGTVD 368
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/321 (12%), Positives = 82/321 (25%), Gaps = 2/321 (0%)
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
+ S + + T + + T + +
Sbjct: 237 YAGTDTGLGVAADASTYTYNAANKSYTFDATGVAKADAGTALKGYLGASNTGKINIGGTE 296
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
++ + + A A + F A+
Sbjct: 297 QEVNIAKDGSITDTNGDALYLDSTGNLTKNTANLGAADKATVDKLFAGAQDATITFDSGM 356
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
A + S S A A+ + G+ V + V K
Sbjct: 357 TAKFDQTAGTVDFKGASISADAMASTLNNGSYTANVGGKAYAVTAGAVQTGGADVYKDTT 416
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL--AMEEMVSFIDTQ 371
+ + T + S T+ + A + + +D
Sbjct: 417 GALTTEDDETVTATYYGFADGKVSDGEGSTVYKAADGSITKDATTKSEATTDPLKALDDA 476
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I +G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 477 ISQIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQA 536
Query: 432 AVQALSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 537 GNSVLAKANQVPQQVLSLLQG 557
>gi|331663422|ref|ZP_08364332.1| bacterial flagellin N-terminus subfamily [Escherichia coli TA143]
gi|331059221|gb|EGI31198.1| bacterial flagellin N-terminus subfamily [Escherichia coli TA143]
Length = 559
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 60/416 (14%), Positives = 119/416 (28%), Gaps = 5/416 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D + + + D T + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMK-IQVGANDGQTITIDLKKIDSDTLGLSGFNVNGKGAVA 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ TE + V+ S +T G+ + A
Sbjct: 183 NAKATEADLTGAGFSQGAVDTNGNSTWTKSTTTNYSAATTADLLSTIKDGSTVTYAGTDT 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + + +G +G+ + + + I + T + +
Sbjct: 243 GLGVAAAGNYTYDANSKSYSFNANGLTGANTATALKGYLGTGANTAKISIGGTEQEVNIA 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G T + S + + V I +
Sbjct: 303 KDGTITDTNGDALYLDTTGNLTKNYAGSPPAATLDNVLASATVNATIKFDSGMTVDYTAG 362
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL-VDAD 414
+ + A +GK ++++ + G + DAD
Sbjct: 363 TGANITGASISADDMAAKLSGKAYTVANGAESYDVAAVTGAVTTTAGNSPVYADAD 418
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 53/402 (13%), Positives = 110/402 (27%), Gaps = 5/402 (1%)
Query: 52 IMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSE 111
+ SD LS + + +A ++ A + + + T + +
Sbjct: 162 KIDSDTLGLSGFNVNGKGAVANAKATEADLTGAGFSQGAVDTNGNSTWTKSTTTNYSAAT 221
Query: 112 ITQLQSQL-RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL 170
L S + + G+ T G T + YL
Sbjct: 222 TADLLSTIKDGSTVTYAGTDTGLGVAAAGNYTYDANSKSYSFNANGLTGANTATALKGYL 281
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
S GTE+ + ++ I +D + + A
Sbjct: 282 GTGANTAKISIGGTEQEVNIAKDGTITDTNGDALYLDTTGNLTKNYAGSPPAATLDNVLA 341
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVR 290
+ A + ++ +K A + V
Sbjct: 342 SATVNATIKFDSGMTVDYTAGTGANITGASISADDMAAKLSGKAYTVANGAESYDVAAVT 401
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
+ + P Y ++ + V + + S Y ++T A
Sbjct: 402 GAVTTTAGNSPVYADADGKLTTSASNTVTQTYHEFANGNIYDDKGSSLYKAADGSLTSEA 461
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + + +D I +G++ +R+ + + + R+
Sbjct: 462 KGKSEATA----DPLKALDEAISSIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRI 517
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 518 QDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 559
>gi|313106052|ref|ZP_07792311.1| A-type flagellin [Pseudomonas aeruginosa 39016]
gi|30692065|gb|AAP33173.1| FliC [Pseudomonas aeruginosa]
gi|30692074|gb|AAP33174.1| FliC [Pseudomonas aeruginosa]
gi|310878813|gb|EFQ37407.1| A-type flagellin [Pseudomonas aeruginosa 39016]
Length = 387
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 63/450 (14%), Positives = 121/450 (26%), Gaps = 65/450 (14%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + + +L R+S+G S K D L
Sbjct: 3 LTVNTNIASLNTQRNLNNSSASLNTSLQRLSTG-------------SRINSAKDDAAGLQ 49
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
+ + S + A Q+ LQ
Sbjct: 50 IANR---------------------LTSQVNGLNVATKNANDGISLAQTAEGALQQSTNI 88
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ R + ++ ++ S ++ V D T L + + S
Sbjct: 89 LQRMRDLSLQSANGSNSDSERTALNGEVKQLQKELDRISNTTTFGGRKLLDGSFGVASFQ 148
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
G+ ++ + + + T +T + G +A
Sbjct: 149 VGSAANEIISVGIDEMSAESLNGTYFTATGGGAVTAATASGTVDIAIGITGGSAVNVKVD 208
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
KG T AA N + G+ + S +
Sbjct: 209 MKGNETAEQAAAKIAAAVNDANVGIGAFTDGAQISYVSKASAD----------------- 251
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
S + + + +
Sbjct: 252 --------------GTTSAVSGVAITDTGSTGAGTAAGTTTFTEANDTVAKIDISTAKGA 297
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ V ID IK A +G++ +R + +K + + V GR+ D D A+E+
Sbjct: 298 QSAVLVIDEAIKQIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDFAAETAN 357
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ L+ N +LSL R
Sbjct: 358 LTKNQVLQQAGTAILAQANQLPQSVLSLLR 387
>gi|30692080|gb|AAP33175.1| FliC [Pseudomonas aeruginosa]
gi|126165556|gb|ABN80235.1| FliC [Pseudomonas aeruginosa]
Length = 387
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 63/450 (14%), Positives = 121/450 (26%), Gaps = 65/450 (14%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + + +L R+S+G S K D L
Sbjct: 3 LTVNTNIASLNTQRNLNNSSASLNTSLQRLSTG-------------SRINSAKDDAAGLQ 49
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
+ + S + A Q+ LQ
Sbjct: 50 IANR---------------------LTSQVNGLNVATKNANDGISLAQTAEGALQQSTNI 88
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ R + ++ ++ S ++ V D T L + + S
Sbjct: 89 LQRMRDLSLQSANGSNSDSERTALNGEVKQLQKELDRISNTTTFGGRKLLDGSFGVASFQ 148
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
G+ ++ + + + T +T + G +A
Sbjct: 149 VGSAANEIISVGIDEMSAESLNGTYFTANGGGAVTAATASGTVDIAIGITGGSAVNVKVD 208
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
KG T AA N + G+ + S +
Sbjct: 209 MKGNETAEQAAAKIAAAVNDANVGIGAFTDGAQISYVSKASAD----------------- 251
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
S + + + +
Sbjct: 252 --------------GTTSAVSGVAITDTGSTGAGTAAGTTTFTEANDTVAKIDISTAKGA 297
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ V ID IK A +G++ +R + +K + + V GR+ D D A+E+
Sbjct: 298 QSAVLVIDEAIKQIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDFAAETAN 357
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q QQ L+ N +LSL R
Sbjct: 358 LTKNQVLQQAGTAILAQANQLPQSVLSLLR 387
>gi|194014727|ref|ZP_03053344.1| flagellin [Bacillus pumilus ATCC 7061]
gi|194013753|gb|EDW23318.1| flagellin [Bacillus pumilus ATCC 7061]
Length = 299
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 49/139 (35%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ ++ ++ V+ A +E+ + ++ ID I
Sbjct: 161 FQIGANGAQQLSVHIEAMSADKLGVEDKTVSTIKVTDFAEIAADEEGGFNDQLAIIDGAI 220
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
K + K+G++ +R+ + + + + R+ D DMA E + + Q +
Sbjct: 221 KQVSDQRSKLGAVQNRLEHTINNLGASAENLTAAESRIRDVDMAKEMSEFTKNNILSQAS 280
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N +L L R
Sbjct: 281 QAMLAQANQQPQNVLQLLR 299
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 65/146 (44%), Gaps = 10/146 (6%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ +L N + +++SSGL+++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTLNRLSANNGAGQKNMEKLSSGLKINRAGDDAAGLAISEKMRGQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK----SIQSEITQLQSQL 119
+ G S + A+ +++ ++ ++ + GT + +IQ EI L ++
Sbjct: 63 TKNAQDGISLIQTAEGALTETHSILQRVRELVVQAGNTGTQDETDLGAIQEEIDALVQEI 122
Query: 120 ------RDIARGSSFNGENWLRTDLG 139
I+ + FNG+ L
Sbjct: 123 GNGTDKNGISDRTEFNGKKLLDGTFA 148
>gi|88799043|ref|ZP_01114624.1| Flagellin and related hook-associated protein [Reinekea sp. MED297]
gi|88778270|gb|EAR09464.1| Flagellin and related hook-associated protein [Reinekea sp. MED297]
Length = 747
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 39/252 (15%), Positives = 82/252 (32%), Gaps = 3/252 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L +R+SSGLR++ A D+AA +I+ +S L+
Sbjct: 5 INTNIASLTAQRNLNTSQGANATALERLSSGLRINSAKDDAAGLAISTKFESQVKGLNVA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
G G S A+ + + + I+ D ++Q E+ QL +++
Sbjct: 65 IRNAGDGISLAQTAEGALGSMTENLQRIRELAVQSSNATNSDDDRVALQQEVKQLMAEVS 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A ++FNG N L + A + ++ + + ++ D
Sbjct: 125 RTASETNFNGRNLLDGTFKGTFQIGADAGQTVDVQISELTAEKLGASDQVGVSSIGTDYG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + I + + ++ T A+
Sbjct: 185 ISNGDLVLNGVQIGPSSATDDTASTIGGDASAIAKVATINRYSDETGVTAFANENEVNGS 244
Query: 241 QAKGIATIPVPL 252
+
Sbjct: 245 TMAANGGTTATV 256
Score = 117 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 37/279 (13%), Positives = 82/279 (29%)
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+T + + + + V + D +K + AT
Sbjct: 468 DDTGVTAYVNETVVVGVTGAATAATAGDSIGIMINGVDIGDVVSQGDIQKDRAATIDAIN 527
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
K+ I + T + + G I A
Sbjct: 528 NKSGQTGVMATDNGEGITLTAADGRNISVALVETGAGTAAQGQFGLSETVDGIGAIADGA 587
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
T+ + + ++T + V + L + +
Sbjct: 588 TSTLAAATFDTGASTTYSTVRLESAGTIDIDAGSNGTTGLTDTGFARGEYGGGMDGTYLK 647
Query: 352 TDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ ++ ++ ID +K + ++G++ +R +++ + + R+
Sbjct: 648 DVDISTFQGAQDAITAIDNALKTVASQRAELGALQNRFESTSSNLQITSENLAAANSRIR 707
Query: 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
DAD A+E+ LS Q QQ + L+ N ++LSL
Sbjct: 708 DADFAAETAELSRTQVLQQAGISILAQANQRPQQVLSLL 746
>gi|317180372|dbj|BAJ58158.1| flagellin A [Helicobacter pylori F32]
Length = 510
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 69/505 (13%), Positives = 146/505 (28%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N +V + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG----------------- 283
Q+ ++ + + + S + + + T
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQNGRLNLRSLDG 304
Query: 284 -----------------NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ TK S AK N D++
Sbjct: 305 RGIEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFT 364
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-ATAAAGKI--- 382
+ ++ + +++ + + T G +
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGSGVTTLRGAMVVI 424
Query: 383 ---GSISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
S + + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|312142920|ref|YP_003994366.1| flagellin domain protein [Halanaerobium sp. 'sapolanicus']
gi|311903571|gb|ADQ14012.1| flagellin domain protein [Halanaerobium sp. 'sapolanicus']
Length = 323
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 43/303 (14%), Positives = 103/303 (33%), Gaps = 6/303 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++ K+ NL +R+SSG R++ AAD+AA +I+Q M +
Sbjct: 3 INTNATALNTYNKVNKFQKNLRSSLERLSSGKRINKAADDAAGLAISQKMNGQVRGTAQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAID-VMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
+ G S + A+ G+++ D + ++ D K++Q+E ++++ +
Sbjct: 63 QRNVQDGISLLQTAEGGLAEIQDPPLQRMRELALQAANDTYTENDRKAMQNEFDEMKNSI 122
Query: 120 RDIARGSSFNGENW--LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
DIA + FN + ++ + + S+ + + G + ++ +
Sbjct: 123 DDIANNTEFNTQKLLNVKIESVTEVDSVNGTDETGSTEETQGTEESQKVEPVGEWVYNEY 182
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
T+ + + + + S +
Sbjct: 183 GQWTNAISVDSEGNSYVGYYDGTIIKLNSNGDEIFNFKAADNAMINEIEISLNDNIVITS 242
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ K + L + G + + ++ + I + ++ + I
Sbjct: 243 NDETVKKLDPDQNTLWVFNDHYDHVKGLAIDNNNNIITGSRAGPGNYDTIRKKNSSGDEI 302
Query: 298 TSD 300
Sbjct: 303 WRY 305
>gi|116563795|gb|ABJ99910.1| phase 1 flagellin [Salmonella enterica subsp. enterica serovar
Pullorum]
Length = 424
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 53/424 (12%), Positives = 110/424 (25%), Gaps = 53/424 (12%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+SSGLR++ A D+AA +IA S+ L+ S G S + +++ + +
Sbjct: 1 RLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTTEGALNEINNNLQ 60
Query: 90 TIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTD--------- 137
+++ SIQ EI Q ++ ++ + FNG L D
Sbjct: 61 SVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGA 120
Query: 138 -------------------------LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
G A++ Y +D
Sbjct: 121 NDGETITIDLQKIDVKSLGLDGFNVNGPKEATVGDLKSSFKNVTGYDTYAAGADKYRVDI 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + + ++ + N ++ + T T + K +
Sbjct: 181 NSGAVVTDAAAPDKVYVNAANGQLTTDDAENNTAVDLFKTTKSTAGTAEAKAIAGAIKGG 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSG----------------TSGSKSPSVAAS 276
K + + +TT + + + +
Sbjct: 241 KEGDTFDYKGVTFTIDTKTGDDGNGKVSTTINGEKVTLTVADIATGATDVNAATLQSSKN 300
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + T S N+ V + K
Sbjct: 301 VYTSVVNGKFTFDDKTKNESAKLSDLEANNAVKGESKITVNGAEYTANATGDKITLAGKT 360
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
++ N DA K + ++ ID+ + +G+I +R +
Sbjct: 361 MFIDKTASGVSTLINEDAAAAKKSTANPLASIDSALSKVDTVRSSLGAIQNRFDSAITNL 420
Query: 397 KLMR 400
Sbjct: 421 GNTV 424
>gi|15611615|ref|NP_223266.1| flagellin A [Helicobacter pylori J99]
gi|15645226|ref|NP_207396.1| flagellin A [Helicobacter pylori 26695]
gi|207092176|ref|ZP_03239963.1| flagellin A [Helicobacter pylori HPKX_438_AG0C1]
gi|254779405|ref|YP_003057510.1| flagellin A [Helicobacter pylori B38]
gi|308182764|ref|YP_003926891.1| flagellin A [Helicobacter pylori PeCan4]
gi|308184385|ref|YP_003928518.1| flagellin A [Helicobacter pylori SJM180]
gi|60392281|sp|P0A0S1|FLAA_HELPY RecName: Full=Flagellin A
gi|60392282|sp|P0A0S2|FLAA_HELPJ RecName: Full=Flagellin A
gi|2313722|gb|AAD07667.1| flagellin A (flaA) [Helicobacter pylori 26695]
gi|4155099|gb|AAD06133.1| FLAGELLIN A [Helicobacter pylori J99]
gi|25990057|gb|AAN74968.1| flagellin [Helicobacter pylori]
gi|254001316|emb|CAX29301.1| Flagellin A [Helicobacter pylori B38]
gi|308060305|gb|ADO02201.1| flagellin A [Helicobacter pylori SJM180]
gi|308064949|gb|ADO06841.1| flagellin A [Helicobacter pylori PeCan4]
gi|317009384|gb|ADU79964.1| flagellin A [Helicobacter pylori India7]
gi|317014022|gb|ADU81458.1| flagellin A [Helicobacter pylori Gambia94/24]
gi|325995880|gb|ADZ51285.1| Flagellin [Helicobacter pylori 2018]
gi|325997475|gb|ADZ49683.1| Flagellin A [Helicobacter pylori 2017]
Length = 510
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 69/505 (13%), Positives = 146/505 (28%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N +V + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG----------------- 283
Q+ ++ + + + S + + + T
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLRSIDG 304
Query: 284 -----------------NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ TK S AK N D++
Sbjct: 305 RGIEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFT 364
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-ATAAAGKI--- 382
+ ++ + +++ + + T G +
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGSGVTTLRGAMVVI 424
Query: 383 ---GSISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
S + + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|295703234|ref|YP_003596309.1| flagellin [Bacillus megaterium DSM 319]
gi|294800893|gb|ADF37959.1| flagellin [Bacillus megaterium DSM 319]
Length = 242
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 84/223 (37%), Gaps = 3/223 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++ N +++SSG R+++AAD+AA +I++ M+ L
Sbjct: 3 INHNITALNTYRQYNTANNAQAKSMEKLSSGQRINNAADDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + + +++ ++ ++ D IQ E+T L S++
Sbjct: 63 SRNAQDGVSMIQTGEGALNETHSILQRVRELAVQSSSDTNTADDRAEIQKEVTDLISEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + L G + + + D ++ + ++ + D++
Sbjct: 123 RIATDTEFNTQKLLDGTGGDAGKFTFQIGANKDQKIDVTFAKMDSTSLGVNAIDLSADAA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
T + + E L + +ST
Sbjct: 183 TSTAAIDTIDAAIKTVSDERAQLGAKQNRLDHTINNLSTSSEN 225
Score = 67.1 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 22/55 (40%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ID IK + ++G+ +R+ + + + + R+ D D A
Sbjct: 188 IDTIDAAIKTVSDERAQLGAKQNRLDHTINNLSTSSENLTAAESRIRDVDYALAV 242
>gi|239996707|ref|ZP_04717231.1| flagellar hook-associated protein FlgL [Alteromonas macleodii ATCC
27126]
Length = 407
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 47/450 (10%), Positives = 123/450 (27%), Gaps = 51/450 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN + + +L Q++++SG R+ +D+ + + + L+
Sbjct: 3 ISTNQIYDQNMRSIMQNQGDLAKTQEQLASGKRIITPSDDPVGAAKVLRLTEEIDELTQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
L + ++ +A ++ + ++ + + D K+I +E+ Q++ ++
Sbjct: 63 QRNNDLVTGSLEQQEAVLTNITNSVNRARTLVIQAGSGALDSPDRKAIGAELEQIKLEIF 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
D+ G + A G ++ + + +
Sbjct: 123 DLMNTQDAEGSYLYAGFQSGNQAFEYNPTATDKAITFTGDAGVSFVQLSNSSKIQSTSNG 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ E + V+ +
Sbjct: 183 YEVFENVLSRYKFSTDPASTAVVSE----------------------------------- 207
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + ++ G +++ + T +
Sbjct: 208 --------ASVKQQGTFDTFFDKNYDPVNTGNNDYRINFLASGQAELVNQGTGVIVESVA 259
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
K + S K+ + + ++ D++ + +
Sbjct: 260 YTSGQPFTIKGMEFEATAVPGDSIDLSLDAPEKKSMAQTLHEIQAVLNDSSIDSFELQES 319
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + + +D ++ + IGS + + M A + + D D A ST
Sbjct: 320 ISDALVGLDNGLEKLSLEHASIGSRLNIAESIYESNLDMEIAAKASRSSIQDTDYAEAST 379
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ +T A+ V LSLF
Sbjct: 380 EFAKQETALSAALATFPQV-----TELSLF 404
>gi|145966004|dbj|BAF57217.1| flagellin [Clostridium novyi]
Length = 272
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 39/242 (16%), Positives = 82/242 (33%), Gaps = 3/242 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA SI++ M+ L+
Sbjct: 3 INHNMNAMNAHRMMGANINGAGKAMEKLSSGLRINRAGDDAAGLSISEKMRGQIRGLTQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ + D IQ E +QLQ+++
Sbjct: 63 SRNAQDGISLIQTAEGALNETHAILQRMRELSVQAANDTNKTEDRAMIQKEFSQLQTEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + + FN +N L S + + N ++
Sbjct: 123 RIGKDTQFNKQNLLTGSAKSLDFQVGANAGQVINVKINDMRATALQIDGSKVXITKGXNA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + S + + + A + + A
Sbjct: 183 KAAMTAIDTAINTVSDERATLGSIQNRLEHTINSDNNAAENLQAAESRIRDVDMAKEMMQ 242
Query: 241 QA 242
+
Sbjct: 243 FS 244
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 40/102 (39%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
+ + + ++ IDT I + +GSI +R+ + + ++ R
Sbjct: 171 GSKVXITKGXNAKAAMTAIDTAINTVSDERATLGSIQNRLEHTINSDNNAAENLQAAESR 230
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D DMA E + S QQ A L+ N +L L R
Sbjct: 231 IRDVDMAKEMMQFSKKXILQQAAQAMLAQANQQPQGVLQLLR 272
>gi|114054903|gb|ABI50051.1| FlaA [Clostridium botulinum]
Length = 270
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 78/194 (40%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNLNAMNAHRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ G D +I++EIT+L +++
Sbjct: 63 SRNSQDSISLIQTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L I + + T + T L ++
Sbjct: 123 RISQQTEFNTQKLLSGGFADKNFQIGANKAQTIKLSIGDMSAKTLGVSGVSVSTATLATA 182
Query: 181 TDGTERYGLLDRNH 194
+ T L +
Sbjct: 183 SIATIDTALGKVST 196
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 41/113 (36%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + + ++ IDT + + K+G+ +R+ + +
Sbjct: 158 SIGDMSAKTLGVSGVSVSTATLATASIATIDTALGKVSTERAKLGANQNRLEHTINNLNT 217
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA E S Q A L+ N + +L L R
Sbjct: 218 SSENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLLR 270
>gi|33590257|gb|AAQ22689.1| flagellin [Escherichia coli]
Length = 557
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 50/365 (13%), Positives = 103/365 (28%), Gaps = 4/365 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR-DDNGKVQITTIDYYLDPETVLLD 178
++ + FNG N L D A I + + ++ + +
Sbjct: 124 DRVSGQTQFNGVNVLSKDGSMKIQVGANDGETITIDLKKIDSDTLNLAGFNVNGAGSVDN 183
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ G + ++ D T + K A +
Sbjct: 184 AKATGKDLTDAGFTASAADANGKITYTKDTVTKFDKATAADVLGKAAAGDSITYAGTDTG 243
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
A +T + T ++ G +I N
Sbjct: 244 LGVAADASTYTYNAANKSYTFDATGVAKADAGTALKGYLGASNTGKINIGGTEQEVNIAK 303
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ A ++ + + L + + + T +++
Sbjct: 304 DGSITDTNGDALYLDSTGNLTKNTANLGAADKATVDKLFAGAQDATITFDSGMTAKFDQT 363
Query: 359 LAMEE 363
+
Sbjct: 364 AGTVD 368
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 50/138 (36%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
D T K D S V + DA + A + + +D I
Sbjct: 420 TTEDDETVTATYYGFTDGKVSDGEGSTVYIAADGSITKDATTKSEATTDPLKALDDAISQ 479
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 480 IDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNS 539
Query: 435 ALSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 540 VLAKANQVPQQVLSLLQG 557
>gi|320182760|gb|EFW57644.1| Flagellar biosynthesis protein FliC [Shigella boydii ATCC 9905]
Length = 189
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 3/154 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ + SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSVLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
++ + FNG N L D A
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTIT 157
>gi|114054911|gb|ABI50055.1| FlaA [Clostridium botulinum]
Length = 267
Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 72/181 (39%), Gaps = 3/181 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 1 INHNLNAMNAXRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ G D +I++EIT+L +++
Sbjct: 61 SRNSQDSISLIQTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEIN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L I + + T + +
Sbjct: 121 RISQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLTIGDMSAKTLGVSGVSVSDASKATD 180
Query: 181 T 181
+
Sbjct: 181 S 181
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 41/112 (36%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 156 TIGDMSAKTLGVSGVSVSDASKATDSIATIDKALGTVSTERAKLGANQNRLEHTINNLNT 215
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ ++ R+ D DMA E S Q A L+ N + +L L
Sbjct: 216 SSENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLL 267
>gi|332982144|ref|YP_004463585.1| flagellin domain-containing protein [Mahella australiensis 50-1
BON]
gi|332699822|gb|AEE96763.1| flagellin domain protein [Mahella australiensis 50-1 BON]
Length = 280
Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats.
Identities = 42/272 (15%), Positives = 91/272 (33%), Gaps = 5/272 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N AM+A ++L N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNVMAMNAYRQLTVTNNAGAKALEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLAQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + A+ G+++ ++ ++ + D IQ EIT+LQ ++
Sbjct: 63 SRNAQDGISLIQTAEGGLNETHSILQRMRELVVQAANDTNTSEDRTQIQQEITELQKEID 122
Query: 121 DIARGSSFNGENWLRTD--LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
IA + FN + L I + + + + + ++
Sbjct: 123 RIASTTQFNTKTLLNGSLATTGLVFQIGANSSQTIELTIKDMHATALGASSVKVDDIDVE 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+++ L + + + + A A
Sbjct: 183 AASTAVSISAYLSVLDSAIDQVSTERAKLGAYQNRLEHTVANLDTSAENLQAAESRIRDV 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
+ + + A + ++
Sbjct: 243 DMAKEMMEFTRTNILAQAGTAMLAQANAKPQT 274
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 45/118 (38%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
++ + + + +A + +++ +S +D+ I + K+G+ +R+
Sbjct: 163 DMHATALGASSVKVDDIDVEAASTAVSISAYLSVLDSAIDQVSTERAKLGAYQNRLEHTV 222
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + ++ R+ D DMA E + Q L+ N +L L +
Sbjct: 223 ANLDTSAENLQAAESRIRDVDMAKEMMEFTRTNILAQAGTAMLAQANAKPQTVLQLLQ 280
>gi|157690947|ref|YP_001485409.1| flagellin [Bacillus pumilus SAFR-032]
gi|157679705|gb|ABV60849.1| flagellin protein [Bacillus pumilus SAFR-032]
Length = 322
Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 72/203 (35%), Gaps = 4/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ +L N + +++SSGL+++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTLNRLSANNGASQKNMEKLSSGLKINRAGDDAAGLAISEKMRGQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS----KSIQSEITQLQSQL 119
S G S + A+ +++ ++ ++ + GT +I+ EIT L ++
Sbjct: 63 SKNAQDGISLIQTAEGALTETHSILQRVRELVVQAGNTGTQQGEDLTAIKDEITALVDEV 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FNG+ L + D + ++
Sbjct: 123 DGISNRTEFNGKKLLNGTFNGTGTPGTPGTPADSEAGTPEIPATPATDGEALVFQIGANA 182
Query: 180 STDGTERYGLLDRNHKIKVEPQV 202
+ +
Sbjct: 183 TQQIKVNIQDMSAAALGVAGTDG 205
Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 45/121 (37%)
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
V T A +E ++ ++ +D IK +A K+G++ +R+
Sbjct: 202 GTDGKTETGKSVKDIDVSKFETIAADEDGGFDDQLAIVDGAIKQVSAQRSKLGAVQNRLE 261
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + + R+ D DMA E + + Q + L+ N +L L
Sbjct: 262 HTINNLGASSENLTAAESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQQPQNVLQLL 321
Query: 451 R 451
R
Sbjct: 322 R 322
>gi|323498411|ref|ZP_08103407.1| flagellin [Vibrio sinaloensis DSM 21326]
gi|323316484|gb|EGA69499.1| flagellin [Vibrio sinaloensis DSM 21326]
Length = 377
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 70/183 (38%), Gaps = 3/183 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +AM+A + L + + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVAAMTAQRHLNAASTAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ EIT L +L
Sbjct: 64 AVRNANDGISMAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + T+
Sbjct: 124 NRIAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLTMKNMRSDNTMMGGNSYIAENGQD 183
Query: 180 STD 182
+
Sbjct: 184 ANW 186
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 34/362 (9%), Positives = 89/362 (24%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRHLNAASTAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISM 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + +S ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + A S
Sbjct: 135 NKLLNGTFATKSFQIGADNGEAVMLTMKNMRSDNTMMGGNSYIAENGQDANWAVQAGSND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ + + + T G T+ A V
Sbjct: 195 LTINLTDKFGQEQNIEINAKAGDDIEELATYINGQTDLVKASVDQDGQLQLFTDNNKVEG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ +G + +T ++ V+ +D +K + ++G+ +R
Sbjct: 255 EATFGGSLAGDLGIGDAQAVTVDTIDVRSVGGAQQSVAIVDAALKFVDSHRAELGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + + V R+ D D A E+T L+ Q Q + L+ + L
Sbjct: 315 FNHAINNLDNINENVNASKSRIKDTDFAKETTALTKSQILTQASSSVLAQAKQAPNSALG 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|183221256|ref|YP_001839252.1| flagellar filament 35 kDa core protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|167779678|gb|ABZ97976.1| Flagellar filament 35 kDa core protein (Flagellin class B; 35 kDa
antigen) [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 284
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 65/146 (44%), Gaps = 4/146 (2%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
MT I N SA+ A + L + + +++ + +++G+R++ D++ +S+++ ++S A
Sbjct: 1 MTMIINHNISALVAKRALSNTSRDMDKSMEHLATGMRINRPGDDSLGFSVSEKLRSQIRA 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQ 116
L G S + + + + + ++ ++ D K +Q E++QL
Sbjct: 61 LGQAERNTQDGMSFLQVTEGSLDQVNSILQRLRELSVQSANGIYSDEDRKLVQLEVSQLV 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSST 142
++ I + FN L +
Sbjct: 121 EEVERIGTSAEFNKVKPLDGRFSRAN 146
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 35/101 (34%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
N + + + +D I +G+ +R+ L + + +
Sbjct: 180 GNKLTLSTPNKASDSLQVLDDAISKVNRLRSDLGAYYNRLDLTLKSLSNNYVNMVSSESQ 239
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ DADMA+E S Q + V L+ N ++ L
Sbjct: 240 IRDADMATEMVEYSKNQILTKSGVAMLAQANLRPESVVKLL 280
>gi|332798838|ref|YP_004460337.1| flagellin domain-containing protein [Tepidanaerobacter sp. Re1]
gi|332696573|gb|AEE91030.1| flagellin domain protein [Tepidanaerobacter sp. Re1]
Length = 366
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 41/260 (15%), Positives = 90/260 (34%), Gaps = 3/260 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++ ++L N N++ +++SSG R++ A D+AA +I++ M++ L+
Sbjct: 3 INNNIMALNTHRQLSINNTNVQKSLEKLSSGYRINRAGDDAAGLAISEKMRAQIRGLNMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D ++Q E+ QLQS++
Sbjct: 63 SKNAQDGISLIQTAEGALTEVHSILQRMRELAVQAANDTNETVDRDAVQEELAQLQSEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + L L ++ I S+ + + DY ++ T +
Sbjct: 123 RIADTTQFNQKKLLNGSLNANVTDIGASLTAANGISNIKITGAAAGDYSIEVNTTDSTIT 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
++ + +
Sbjct: 183 LSDGTDSQTINYGSVPSDFETKDVTFGSLGITVTINSQIADISADNEFTVDATGQISLMI 242
Query: 241 QAKGIATIPVPLPAAPAAPN 260
A + + + A
Sbjct: 243 GANEGENMTISIGDMRADAF 262
Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 29/203 (14%), Positives = 64/203 (31%)
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
NTT T + + + Y + + T + + +
Sbjct: 163 TGAAAGDYSIEVNTTDSTITLSDGTDSQTINYGSVPSDFETKDVTFGSLGITVTINSQIA 222
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
N T +L + + + + + + + ++ A E V+
Sbjct: 223 DISADNEFTVDATGQISLMIGANEGENMTISIGDMRADAFTGLTSISVSDATAAEAAVTV 282
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
I+ I + K+G+ +R+ + + + ++ R+ D DMA E +
Sbjct: 283 INDAISKVSTERSKLGAYQNRLEHTINNLDTSAENLQSAESRIRDVDMAKEMMEFTKQNI 342
Query: 428 QQQLAVQALSIVNNSTARILSLF 450
Q A L+ N + +L L
Sbjct: 343 LTQAATAMLAQANMAPQTVLKLL 365
>gi|227876882|ref|ZP_03994986.1| flagellin family protein [Mobiluncus mulieris ATCC 35243]
gi|227842526|gb|EEJ52731.1| flagellin family protein [Mobiluncus mulieris ATCC 35243]
Length = 163
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 24 LEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSK 83
L +++SSG R++ AAD+AA +I++ ++S G G S V A+ +++
Sbjct: 39 LAKSLEKLSSGFRINRAADDAAGLAISEGLRSQVGGNRQAVRNAQDGISLVQTAEGALNE 98
Query: 84 AIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGS 140
++ ++ G +I +E+ QL+ +L I + ++FNG N L
Sbjct: 99 VHSILQRMRTLAVQGATDSNSGEARNNINTELNQLREELERIGKVTNFNGTNLLNGSASG 158
Query: 141 STA 143
A
Sbjct: 159 PNA 161
>gi|145966006|dbj|BAF57218.1| flagellin [Clostridium novyi]
Length = 272
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 39/242 (16%), Positives = 82/242 (33%), Gaps = 3/242 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA SI++ M+ L+
Sbjct: 3 INHNMNAMNAHRMMGQNINGAGKAMEKLSSGLRINRAGDDAAGLSISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ + D IQ E +QLQ+++
Sbjct: 63 SRNAQDGISLIQTAEGALNETHAILQRMRELSVQAANDTNKTEDRAMIQKEFSQLQTEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + + FN +N L S + + N ++
Sbjct: 123 RIGKDTQFNKQNLLTGSAKSLDFQVGANAGQVINVKINDMRATALKIDAAKVSITKGANA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + S + + + A + + A
Sbjct: 183 KAAMTAIDTAINTVSDERATLGSIQNRLEHTINSDNNAAENLQAAESRIRDVDMAKEMMQ 242
Query: 241 QA 242
+
Sbjct: 243 FS 244
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/272 (12%), Positives = 65/272 (23%)
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + K ++ + + S
Sbjct: 1 MIINHNMNAMNAHRMMGQNINGAGKAMEKLSSGLRINRAGDDAAGLSISEKMRGQIRGLN 60
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
++ + A A N T +A ++ T
Sbjct: 61 QASRNAQDGISLIQTAEGALNETHAILQRMRELSVQAANDTNKTEDRAMIQKEFSQLQTE 120
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T N M + A + +
Sbjct: 121 ITRIGKDTQFNKQNLLTGSAKSLDFQVGANAGQVINVKINDMRATALKIDAAKVSITKGA 180
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ IDT I + +GSI +R+ + + ++ R+ D DMA E
Sbjct: 181 NAKAAMTAIDTAINTVSDERATLGSIQNRLEHTINSDNNAAENLQAAESRIRDVDMAKEM 240
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ S QQ A L+ N +L L R
Sbjct: 241 MQFSKKNILQQAAQAMLAQANQQPQGVLQLLR 272
>gi|189164103|gb|ABU96039.2| flagellin [Bacillus thuringiensis serovar galleriae]
gi|189164107|gb|ABU96040.2| flagellin [Bacillus thuringiensis serovar galleriae]
gi|189339425|gb|ABD33701.2| flagellin [Bacillus thuringiensis serovar galleriae]
Length = 397
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 36 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 95
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + M+ +++ +++ + ++ E L+ Q+
Sbjct: 96 ANNTQDGISLIRTADSAMNSVSNILLRMRDLANQSANGTNTNENQAALNKEFDALKEQID 155
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
I+ + FN + L +
Sbjct: 156 YISTNTEFNDKKLLDGSNKTIAVQT 180
Score = 96.3 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 40/88 (45%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ IDT +K + +G+ +R+ + +K ++ ++ DADMA E + ++
Sbjct: 310 AIASIDTALKNIASNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMT 369
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + LS N + + L +
Sbjct: 370 KFKILNEAGISMLSQANQTPQMVSKLLQ 397
>gi|317012416|gb|ADU83024.1| flagellin A [Helicobacter pylori Lithuania75]
Length = 510
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 69/505 (13%), Positives = 146/505 (28%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQANSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N +V + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG----------------- 283
Q+ ++ + + + S + + + T
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLRSIDG 304
Query: 284 -----------------NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ TK S AK N D++
Sbjct: 305 RGIEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFT 364
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-ATAAAGKI--- 382
+ ++ + +++ + + T G +
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGSGVTTLRGAMVVI 424
Query: 383 ---GSISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
S + + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|154710458|gb|ABS84298.1| FlkA [Escherichia coli]
Length = 368
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/360 (13%), Positives = 102/360 (28%), Gaps = 4/360 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQL 119
S G S + + + + + I+ + Q+EITQ ++
Sbjct: 64 ASRNANDGISVAQTTEGALGEINNNLQRIRELTVQATNGTNSQSDMESIQAEITQRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+++ + FNG + L D + + S + LD +
Sbjct: 124 DRVSQQTEFNGVSVLGEDKT-LKIQVGANDNQSIDINLKKIDSTVLKLRDLDVVSETQYK 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T + + D + + +K +
Sbjct: 183 DGATTLKGDIKDSTSVQGKFDTTSEAAISFKDGKYYAVVSKSTTTDNNGIYAASVDSDGN 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ V L A T + + S ++ ++ V + +
Sbjct: 243 VTIDASKKVTVDLADAAGDLTKTKVVDEDATAATKTSNPLSKIDDAISDVDSLRSDLGAV 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ ++ + S DS S ++ T +
Sbjct: 303 QNRFDSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQTTQN 362
Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 56/190 (29%)
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
T G+ + + G D A + + N Y +
Sbjct: 179 TQYKDGATTLKGDIKDSTSVQGKFDTTSEAAISFKDGKYYAVVSKSTTTDNNGIYAASVD 238
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
S + K + +S ID I +
Sbjct: 239 SDGNVTIDASKKVTVDLADAAGDLTKTKVVDEDATAATKTSNPLSKIDDAISDVDSLRSD 298
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G++ +R + + + R+ D+D A+E + +S Q QQ L+ N
Sbjct: 299 LGAVQNRFDSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQ 358
Query: 442 STARILSLFR 451
+T +LSL R
Sbjct: 359 TTQNVLSLLR 368
>gi|83647504|ref|YP_435939.1| flagellin-like protein [Hahella chejuensis KCTC 2396]
gi|83635547|gb|ABC31514.1| Flagellin and related hook-associated protein [Hahella chejuensis
KCTC 2396]
Length = 686
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 77/203 (37%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L + + R+SSGLR++ A D+AA +I+ + +
Sbjct: 5 INTNIASLNAQRNLNASQRSGDTALQRLSSGLRINSAKDDAAGLAISTRFDAQIRGTNVA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S A+ +S D + I+ D +++Q E+ QL S++
Sbjct: 65 VRNAGDAISLAQTAEGALSSMKDSLQRIRELSLQSANDTNSTIDREALQEEVDQLISEIE 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L +S ++ + + T + ++
Sbjct: 125 NIAETTNFNGKKLLDGSFQNSVFQTGANLGNTINVSISKLDTSTLGTADTSGISSRTTTT 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
G I + +
Sbjct: 185 ALVVGSTGNEMVAGDIVINGISV 207
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 45/97 (46%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ E + +D ++ T+ ++G+I +R +++ + + R+ DAD
Sbjct: 590 ISTVAGAESALKAVDNALQTVTSKQAELGAIQNRFQNTIANLEVNNENLNSANSRIRDAD 649
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ASE+ LS Q QQ + L+ N ++LSL +
Sbjct: 650 FASETAALSRAQVLQQAGISILAQANARPQQVLSLLQ 686
>gi|332140553|ref|YP_004426291.1| flagellar hook-associated protein FlgL [Alteromonas macleodii str.
'Deep ecotype']
gi|327550575|gb|AEA97293.1| flagellar hook-associated protein FlgL [Alteromonas macleodii str.
'Deep ecotype']
Length = 404
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 41/434 (9%), Positives = 116/434 (26%), Gaps = 49/434 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN + + + +L Q++++SG ++ +D+ + A + + +L+
Sbjct: 3 ISTNQIYDQNIRSILNNQSDLANTQEQLASGKKLLKPSDDPVGAAKALRLTEELDSLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
L + +++ + ++ + ++ + D +I SE+ Q++ ++
Sbjct: 63 QRNNDLVTGSLELQETVLTNVTNSINRARTLAIQAGNGAYSSADRAAISSELKQIKLEIL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
D+ NG A + NG + + + S
Sbjct: 123 DLMNTKDANGNYLYSGYQSGKQAFEFEPSSNGNAVSFNGDQGVNFVQLSDSAKIQSTSSG 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ E + V +++ D + A+ +
Sbjct: 183 FEVFENVQSRYKFTVDPASVVVPTVSEIANQDNFDNFFKANYDATNNDFRVNFLASGQAE 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ T ++ + + + A T + + +
Sbjct: 243 LVNQGTGAVLDSVDFSFGVPFTLQGMKFEANASPGDSFDFSLDAPQNKSMAQTLHELET- 301
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ +++ +
Sbjct: 302 ---------------------------------------------LLSNSSASNDLLEEG 316
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + + +D ++ + IG + + A + + DAD A ST
Sbjct: 317 IADALIGLDNGLEIISLERASIGGRLNIAESISKSNFDLEIAAQASRSSIEDADFAKLST 376
Query: 421 RLSALQTQQQLAVQ 434
+ + A+
Sbjct: 377 EFAKQEAALNAALA 390
>gi|114054919|gb|ABI50059.1| FlaA [Clostridium botulinum]
Length = 267
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 72/181 (39%), Gaps = 3/181 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 2 INHNLNAMNAXRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ G D +I++EIT+L +++
Sbjct: 62 SRNSQDSISLIQTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEIN 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L I + + T + +
Sbjct: 122 RISQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLTIGDMSAKTLGVSGVSVSDASKATD 181
Query: 181 T 181
+
Sbjct: 182 S 182
Score = 83.3 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 41/111 (36%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 157 TIGDMSAKTLGVSGVSVSDASKATDSIATIDKALGTVSTERAKLGANQNRLEHTINNLNT 216
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
+ ++ R+ D DMA E S Q A L+ N + +L L
Sbjct: 217 SSENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQL 267
>gi|17366567|sp|Q56574|FLAC_VIBAN RecName: Full=Flagellin C
gi|1272429|gb|AAB09437.1| flagellin C [Listonella anguillarum]
Length = 377
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 47/365 (12%), Positives = 106/365 (29%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + ++ +R+SSG ++++A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNSASNAQQLSMERLSSGFKINNAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ D +IQ EIT L +L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSSNGSNSKADRVAIQEEITALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L + + I + + N + +
Sbjct: 124 NRIAETTSFGGNKLLNGTFETKSFQIGADNGEAVMLSLNNMRSDNAMMGGKSYQAANGQD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + T
Sbjct: 184 KDWTVKAGANDLTITLTDKRTGEQTINLSAKDGDDIEELATYINGQTDMLKASVDDEGKL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
I + S + T + + + + S
Sbjct: 244 QIFTDSNRIDGVATFGGSLAGELSFQAAKDVTVDTIDVTSVGGSQESVAIVDAALQFVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + +D + +++ K K+ D L ++ + + +
Sbjct: 304 HRAQLGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/362 (10%), Positives = 92/362 (25%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N + + + S +I + + + N ++ +
Sbjct: 15 QRYLNSASNAQQLSMERLSSGFKINNAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + + +S D + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSSNGSNSKADRVAIQEEITALNDELNRIAETTSFGG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A A + + N + T +
Sbjct: 135 NKLLNGTFETKSFQIGADNGEAVMLSLNNMRSDNAMMGGKSYQAANGQDKDWTVKAGAND 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ ++ T + N + T G T+ A V + +
Sbjct: 195 LTITLTDKRTGEQTINLSAKDGDDIEELATYINGQTDMLKASVDDEGKLQIFTDSNRIDG 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G +T +E V+ +D ++ + ++G+ +R
Sbjct: 255 VATFGGSLAGELSFQAAKDVTVDTIDVTSVGGSQESVAIVDAALQFVDSHRAQLGAFQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + + V R+ D D A E+T L+ Q Q + L+ + L
Sbjct: 315 FNHAINNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPNAALG 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|300818653|ref|ZP_07098861.1| bacterial flagellin [Escherichia coli MS 107-1]
gi|30059898|gb|AAP13321.1| FliC [Escherichia coli]
gi|300528825|gb|EFK49887.1| bacterial flagellin [Escherichia coli MS 107-1]
Length = 555
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 3/154 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
++ + FNG N L D A
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTIT 157
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 47/319 (14%), Positives = 92/319 (28%)
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
++ + ++ + +T GT++ +L +
Sbjct: 237 FAAGATGDAYKFNQANNTFTYNTTSTAAELQSYLTPKAGDTATFSVEIGGTKQDVVLASD 296
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
KI + ID + T + A A +
Sbjct: 297 GKITAKDGSKLYIDTTGNLTQNGGGTLEEATLNGLAFNHSGPAAAVQSTITTADGTSIVL 356
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
A TT SA + + + T T +
Sbjct: 357 AGSGDFGTTKTAGAINVTGAVISADALLSASKATGFTSGTYTVGTDGVVKSGGNDVYNKA 416
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ T++TT +D + V + T TDA + + + +D I
Sbjct: 417 DGTGLTTDNTTKYYLQDDGSVTNGSGKAVYADATGKLTTDAETKAETTADPLKALDEAIS 476
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 477 SIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGN 536
Query: 434 QALSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 537 SVLAKANQVPQQVLSLLQG 555
>gi|189164111|gb|ABU96041.2| flagellin [Bacillus thuringiensis serovar galleriae]
Length = 397
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 36 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 95
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + M+ +++ +++ + ++ E L+ Q+
Sbjct: 96 ANNTQDGISLIRTADSAMNSVSNILLRMRDLANQSANGTNTNENQAALNKEFDALKEQID 155
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
I+ + FN + L +
Sbjct: 156 YISTNTEFNDKKLLDGSNKTIAVQT 180
Score = 96.3 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 40/88 (45%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ IDT +K + +G+ +R+ + +K ++ ++ DADMA E + ++
Sbjct: 310 AIASIDTALKNIASNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMT 369
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + LS N + + L +
Sbjct: 370 KFKILNEAGISMLSQANQTPQMVSKLLQ 397
>gi|208434522|ref|YP_002266188.1| flagellin A [Helicobacter pylori G27]
gi|208432451|gb|ACI27322.1| flagellin A [Helicobacter pylori G27]
Length = 510
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 69/505 (13%), Positives = 146/505 (28%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N +V + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESMKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG----------------- 283
Q+ ++ + + + S + + + T
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLRSIDG 304
Query: 284 -----------------NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ TK S AK N D++
Sbjct: 305 RGIEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFT 364
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-ATAAAGKI--- 382
+ ++ + +++ + + T G +
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGSGVTTLRGAMVVI 424
Query: 383 ---GSISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
S + + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|535045|emb|CAA85351.1| flagellin [Escherichia coli]
Length = 565
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 44/369 (11%), Positives = 101/369 (27%), Gaps = 3/369 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
V+ ++ A+ K + +T
Sbjct: 184 KAATISDLAATGAIVTNSSNIVVVTTKFNALDAATAFSKLKDGDSVAVAAQKYTYNASTN 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D A + A+ ++ + + +
Sbjct: 244 DFTTENTVATGTATTDLGATLKAAAGQSQSGTYTFANGKVNFDVDASGNITIGGEKAFLV 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T + ++ + + + + + +
Sbjct: 304 GGALTTNDPTGSTPATMSSLFKAADDKDAAQSSIDFGGKKYEFAGGNSTNGGGVKFKDTV 363
Query: 360 AMEEMVSFI 368
+ + +++ +
Sbjct: 364 SSDALLAQV 372
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/404 (12%), Positives = 126/404 (31%), Gaps = 3/404 (0%)
Query: 52 IMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSE 111
+ SD L+ + + + ++ +++ N + + +
Sbjct: 162 KIDSDTLGLNGFNVNGKGTIANKAATISDLAATGAIVTNSSNIVVVTTKFNALDAATAFS 221
Query: 112 ITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + A+ ++N T + A + +G+ ++ G+ Q T +
Sbjct: 222 KLKDGDSVAVAAQKYTYNASTNDFTTENTVATGTATTDLGATLKAAAGQSQSGTYTFANG 281
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+D+S + T ++ K ++
Sbjct: 282 KVNFDVDASGNITIGGEKAFLVGGALTTNDPTGSTPATMSSLFKAADDKDAAQSSIDFGG 341
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGN---SDIW 288
K A + G ++ A S + + + + + + +
Sbjct: 342 KKYEFAGGNSTNGGGVKFKDTVSSDALLAQVKADSTANNVKITFNNGPLSFTASFQNGVS 401
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR 348
A + + G +T + N DT + ++ K + + +
Sbjct: 402 GSAASNAAYIDSEGELTTTESYNTNYSVDKDTGAVSVTGGSGTGKYAANVGAQAYVGADG 461
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
T+ + A ++ ++ +D I +G+I +R+ + + +
Sbjct: 462 KLTTNTTSTGSATKDPLNALDEAIASIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQS 521
Query: 409 RLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 522 RIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 565
>gi|40950672|gb|AAR97969.1| truncated flagellin [Shigella dysenteriae]
Length = 376
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 80/273 (29%), Gaps = 3/273 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ S + +S A A
Sbjct: 184 KAATVSDLTAAGATGTGPYAVTTNNTALSASDALSRLKTGDTVTTTGSSAAIYTYDAAKG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ + +GT+ S +
Sbjct: 244 NFTTQATVADGDVVNFANTLKPAAGTTASGVYT 276
>gi|189339482|gb|ABD33735.2| flagellin [Bacillus thuringiensis serovar yunnanensis]
Length = 416
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 52/437 (11%), Positives = 117/437 (26%), Gaps = 57/437 (13%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++
Sbjct: 36 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRAR------- 88
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ G+ A + + I A
Sbjct: 89 --------------ENGLGVAANNTQDGMSLI-------------------------RTA 109
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ + N L + S + + + + + +
Sbjct: 110 DSAMNSVSNILLRMRDLANQSANGTNTDDNQKALDKEFSALKEQIDYISKNTEFNDKKLL 169
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + I+ + L + T D K
Sbjct: 170 NGENKTIAIQTLDNADTT-----------KQININLADSSTSALQIDKLTISGKTTDTTK 218
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A + K+ + + T + T S +
Sbjct: 219 TETITVTDDEIKAAKTDIDEFNDAKKALADLKAETSAGKADGSTDDEIKTAVSNFTKSFE 278
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + L K G + + + + +
Sbjct: 279 KIQKFMNDSDIKTVQTEIEKFDAAAPALDKAKGMGIAFTSAMDPKAGTITKAATRQNASD 338
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ ID ++ + +G+ +R+ + +K ++ ++ DADMA E + ++
Sbjct: 339 AIKSIDAALETIASNRATLGATLNRLDFNVNNLKSQSSSMAAAASQIEDADMAKEMSEMT 398
Query: 424 ALQTQQQLAVQALSIVN 440
+ + + LS N
Sbjct: 399 KFKILNEAGISMLSQAN 415
>gi|188588920|ref|YP_001920179.1| flagellin [Clostridium botulinum E3 str. Alaska E43]
gi|251779907|ref|ZP_04822827.1| flagellin [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|188499201|gb|ACD52337.1| flagellin [Clostridium botulinum E3 str. Alaska E43]
gi|243084222|gb|EES50112.1| flagellin [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 270
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 78/194 (40%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNMNAMNAHRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ G D +I++EIT+L +++
Sbjct: 63 SRNSQDSISLIQTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L I + + T + T L ++
Sbjct: 123 RISQQTEFNTQKLLSGGFADKNFQIGANKAQTIKLSIGDMSAKTLGVSGVSVSTATLATA 182
Query: 181 TDGTERYGLLDRNH 194
+ T L +
Sbjct: 183 SIATIDTALGKVST 196
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 41/113 (36%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + + ++ IDT + + K+G+ +R+ + +
Sbjct: 158 SIGDMSAKTLGVSGVSVSTATLATASIATIDTALGKVSTERAKLGANQNRLEHTINNLNT 217
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA E S Q A L+ N + +L L R
Sbjct: 218 SSENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLLR 270
>gi|157691934|ref|YP_001486396.1| flagellin [Bacillus pumilus SAFR-032]
gi|157680692|gb|ABV61836.1| flagellin [Bacillus pumilus SAFR-032]
Length = 299
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 49/139 (35%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ ++ ++ V+ A +E+ + ++ ID I
Sbjct: 161 FQIGANGAQQLSVHIEAMSADKLGVEDKTVSTIKVTDFAEIAADEEGGFNDQLAIIDGAI 220
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
K + K+G++ +R+ + + + + R+ D DMA E + + Q +
Sbjct: 221 KQVSDQRSKLGAVQNRLEHTINNLGASAENLTAAESRIRDVDMAKEMSEFTKNNILSQAS 280
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N +L L R
Sbjct: 281 QAMLAQANQQPQNVLQLLR 299
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 41/291 (14%), Positives = 97/291 (33%), Gaps = 10/291 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ +L N + +++SSGL+++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTLNRLSANNGAGQKNMEKLSSGLKINRAGDDAAGLAISEKMRGQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK----SIQSEITQLQSQL 119
+ G S + A+ +++ ++ ++ + GT + +IQ EI L ++
Sbjct: 63 TKNAQDGISLIQTAEGALTETHSILQRVRELVVQAGNTGTQDETDLGAIQEEIDALVQEI 122
Query: 120 ------RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE 173
I+ + FNG+ L + + I + + I+ +
Sbjct: 123 GNGTDKNGISDRTEFNGKKLLDGTFAAEPEGGEAKKLTFQIGANGAQQLSVHIEAMSADK 182
Query: 174 TVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233
+ D + + + + I +K + +
Sbjct: 183 LGVEDKTVSTIKVTDFAEIAADEEGGFNDQLAIIDGAIKQVSDQRSKLGAVQNRLEHTIN 242
Query: 234 AANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGN 284
A+ + + + A T S++ + + N
Sbjct: 243 NLGASAENLTAAESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQQPQN 293
>gi|16127206|ref|NP_421770.1| flagellin [Caulobacter crescentus CB15]
gi|221236007|ref|YP_002518444.1| flagellin [Caulobacter crescentus NA1000]
gi|13424608|gb|AAK24938.1| flagellin, putative [Caulobacter crescentus CB15]
gi|220965180|gb|ACL96536.1| flagellin [Caulobacter crescentus NA1000]
Length = 424
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 77/447 (17%), Positives = 143/447 (31%), Gaps = 36/447 (8%)
Query: 10 AMSASQ---KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
+++A + L + + L +RVS+G R+ DN A WSI++ M ++ + V+D+
Sbjct: 7 SLNALRGAAALSEADARLSSAGNRVSTGRRIDSPRDNGATWSISRRMATEARSFQVVNDS 66
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIA 123
+ G+S +D+A AG+ + D ++T + K A + D ++ +++ L Q+ +A
Sbjct: 67 LARGASMLDVAAAGVEQIHDFLATAREKALALRDPSLDEPSKLALVADVKMLVDQVNRVA 126
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ F+G+ T +
Sbjct: 127 MQAVFDGKR------------------------------PLADKLTTGSVTYSQTTYNPV 156
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
T V + A+ A
Sbjct: 157 TTAATPASLGGAFVNASGVAAQTFLRDGGATPGRIDLYLDAYGVPDVLEIWQGGARRAAT 216
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
G + P A + + R + +
Sbjct: 217 GQGFVGGGAPVAAGTAVSGRSILSFDYNPASGHDIEFRFNEAGSLAGTAWAVDAIALQPL 276
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
++ + D +++ + + +T A + +
Sbjct: 277 ASARPTTNTTSFTVPDVTTSSATGYDFTSDPNGGSELVTSQPLTAEALDLDTIDWTNVGG 336
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ ++ + AA G +LM D + GVG LVDAD+A ES RL
Sbjct: 337 IFESVEQALNKTRAAGIYFGGRQESFAGLIAQNRLMSDTLATGVGNLVDADLARESARLQ 396
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLF 450
AL+ LA QALSI N+ + +L LF
Sbjct: 397 ALEASASLASQALSIANSQQSWVLGLF 423
>gi|189339498|gb|ABD33775.2| flagellin [Bacillus thuringiensis serovar yosoo]
Length = 401
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 87/205 (42%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++ + +R + DR+SSG R+++A+D+AA +IA M++ L+
Sbjct: 36 INTNINSLRTQEYMRQNQSKMSNSMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVA 95
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + M+ +++ +++ ++ ++Q E +LQ Q+
Sbjct: 96 ANNTQDGMSLIRTADSAMNSVSNILLRMRDIANQSANGTNTDSNKSALQKEFDELQKQIT 155
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L+ D ++ S I + V + + + +
Sbjct: 156 YIADNTQFNDKNLLKEDSEVKIQTLDSSSSEQQIGINLKAVTLEKLGIDKISIGAVAGAG 215
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ D + K + KD
Sbjct: 216 AGAGTKIEQKDIDAVTKGIADLTKD 240
Score = 96.3 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 39/97 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
EK E V ID + +G+ +R+ D +K ++ ++ DAD
Sbjct: 305 AAEKDNALEAVKAIDKALTTVADNRATLGATLNRLDFNVDNLKSQSASMASAASQIEDAD 364
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + ++ + + + LS N + + L +
Sbjct: 365 MAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 401
>gi|294497860|ref|YP_003561560.1| flagellin [Bacillus megaterium QM B1551]
gi|294347797|gb|ADE68126.1| flagellin [Bacillus megaterium QM B1551]
Length = 242
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 75/179 (41%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++ N +++SSG R+++AAD+AA +I++ M+ L
Sbjct: 3 INHNITALNTYRQYNTANNAQAKSMEKLSSGQRINNAADDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + + +++ ++ ++ D IQ E+T L S++
Sbjct: 63 SRNAQDGVSMIQTGEGALNETHSILQRVRELAVQSSSDTNTTDDRAEIQKEVTDLISEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FN + L G++ + + D ++ + + + +D+
Sbjct: 123 RIATDTEFNTQKLLDGTGGNAGKFTFQIGANKDQKIDVTFAKMDSTSLGVKDIDLSVDA 181
Score = 67.5 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 23/54 (42%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ IDT IK + ++G+ +R+ + + + + R+ D D A
Sbjct: 186 AAIDTIDTAIKNVSDERSQLGAKQNRLEHTINNLSTSSENLTAAESRIRDVDYA 239
>gi|237731969|ref|ZP_04562450.1| flagellin [Citrobacter sp. 30_2]
gi|226907508|gb|EEH93426.1| flagellin [Citrobacter sp. 30_2]
Length = 584
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 44/266 (16%), Positives = 80/266 (30%), Gaps = 3/266 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANVKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +S+ + + ++ SIQ+EITQ S++
Sbjct: 64 ASRNANDGISIAQTTEGALSEINNNLQRVRELSVQATNGTNSQSDLDSIQNEITQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L +D A I + + +D+
Sbjct: 124 DRVSGQTQFNGVKVLASDSSMKIQVGANDGETITIDLKEITSSTLGLTGFNVNGKGEVDN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ L V V + + + S N
Sbjct: 184 KAATADSLTLAGFTKGGAVNADGSTTYSKEVPNDAAKAADVLATAKKDSTVDFAGTNTGL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGT 265
A + +
Sbjct: 244 GVAAKAQYAYNADTKSYSFDADNVTN 269
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 45/330 (13%), Positives = 90/330 (27%), Gaps = 1/330 (0%)
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A S++ + T+ + K+ + G + S
Sbjct: 255 ADTKSYSFDADNVTNANALNYLAPKAGDSFSAKVSIGNKTVDVQIGKDGVVKAKDGSDLF 314
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ L P + + + K TT + +
Sbjct: 315 IDLQGNLTQTKASGTETPATWDALIANSDKSDAANLKKVATTITTDAGVVIKSAGGDAAT 374
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
+ ++ S +V + G + V +
Sbjct: 375 NTQIAGAPTAATTSVNIEKATISAAELSKAVGTDDFTLTTGKEEFSVAGGVVTYDNDNTT 434
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK-LAM 361
+ A VG T+ ++ + +G T K A
Sbjct: 435 GPAAAAAFVGQDGKITTTDKEIVNYFAHANGAVTNGTGSTIYQTADGKMTTEAKTKSEAT 494
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
E+ + +D + A +G++ +R + + + R+ DAD A+E +
Sbjct: 495 EDPLKALDNALAKVDALRSDLGAVQNRFDSTITNLGNTVNNLTSARSRIEDADYATEVSN 554
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
+S Q QQ L+ N +T +LSL R
Sbjct: 555 MSRAQILQQAGTSVLAQANQTTQNVLSLLR 584
>gi|317181916|dbj|BAJ59700.1| flagellin A [Helicobacter pylori F57]
Length = 510
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 65/505 (12%), Positives = 139/505 (27%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQANSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N +V + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNQTGVKAYASVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR------------------- 281
Q+ ++ + + + S + + + T
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQNGRLNLRSLDG 304
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
G + S + N T +
Sbjct: 305 RGIEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFT 364
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-----ATAAAGKIGS------------ 384
N + + + + + +G+
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGAGVTTLRGAMVVI 424
Query: 385 -----ISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
+ + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|304310892|ref|YP_003810490.1| Flagellin [gamma proteobacterium HdN1]
gi|301796625|emb|CBL44837.1| Flagellin [gamma proteobacterium HdN1]
Length = 412
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 52/435 (11%), Positives = 123/435 (28%), Gaps = 41/435 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N S + D ++ Q ++S G R+ +D+ SIA ++ A
Sbjct: 3 ISNNQSFSQGVNSMLDQYSSVSYTQLQISEGTRILKPSDDPVGTSIALNLRQQVNAAEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ G +S + +A ++ D++ I++ + D K+I +E+ +L
Sbjct: 63 AKNSGSAASMLKSEEASLTSVNDILGRIRDLLVTAGNGILNYEDRKTIATEMQGRLDELV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A S +G+ ++ + D + + + T
Sbjct: 123 SVANTQSADGKYIFSGARTNTMPITRDAGGNYVYGGDQTNLTVQVNSSVVVKGTDNGSEL 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + SVYD + + G + + +
Sbjct: 183 FMEVPTGNGAFETRQNPLNNGSGVIGPASVYDVAQYLPDTYTVDVFVDGGGVTRYSISDS 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ P + A +
Sbjct: 243 AGGQVVPAPPAVIATDSPEFVNGADIQFNGV----------------------------- 273
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+V V + T+ ++ L + ++ + K
Sbjct: 274 ---------RVAIAGQPVAGDKFTIQPSLKKSVFQTVADAIRDLQLANSSDAMLAHYKNN 324
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + +D I + ++G+ + + + D + + + + + D D A T
Sbjct: 325 VGRALQNVDQAISHTDSFRSQLGTRVNVVESEADINENLVVQAKGALSLVEDLDYAEAIT 384
Query: 421 RLSALQTQQQLAVQA 435
R++ Q A Q+
Sbjct: 385 RMNRQSVALQAAQQS 399
>gi|209695935|ref|YP_002263865.1| flagellin [Aliivibrio salmonicida LFI1238]
gi|208009888|emb|CAQ80201.1| flagellin subunit F [Aliivibrio salmonicida LFI1238]
Length = 385
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/368 (13%), Positives = 108/368 (29%), Gaps = 3/368 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN SAM+A + + + +++SSGL+++ AAD+A+ I+ M + L+
Sbjct: 12 SVNTNISAMTAQRYMNNATAAQADSMEKLSSGLKINSAADDASGLQISNRMTAQTRGLNV 71
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M + +V+ +++ D +++Q E + L +L
Sbjct: 72 AVRNANDGMSIAQTAEGAMKETTNVLQRLRDLSLQSSNGSNTDADREAMQEEASSLTDEL 131
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G + + G+ + I + N
Sbjct: 132 NRIAETTSFAGTRLINGEFGTKSFQIGADSGEAVAMTLNSMRADEATMGGKSYFAEEGRD 191
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ K + T +
Sbjct: 192 INWTVGKENSQFNVQYNDKNGNEQKINIAAKSGDDIEELATYINGQTNELSASVTEKGVL 251
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
TI PL + + N S + + T + I V +
Sbjct: 252 QVFMSGETISSPLTFSGSLANELKMGGESDDTVASMNLTTVGGAQRSIDVIDAALQYVDG 311
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + + + + K++D L + + +
Sbjct: 312 NRASLGAFQNRFESAVNNLTNINENISDSNSQIKDVDFAKETTNLTKNQILTQSSSSILA 371
Query: 360 AMEEMVSF 367
++ +
Sbjct: 372 QAKQAPTA 379
Score = 96.3 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 34/363 (9%), Positives = 78/363 (21%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N TA + S +I + + + +
Sbjct: 23 QRYMNNATAAQADSMEKLSSGLKINSAADDASGLQISNRMTAQTRGLNVAVRNANDGMSI 82
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + ++ D
Sbjct: 83 AQTAEGAMKETTNVLQRLRDLSLQSSNGSNTDADREAMQEEASSLTDELNRIAETTSFAG 142
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A + A N+ + T +
Sbjct: 143 TRLINGEFGTKSFQIGADSGEAVAMTLNSMRADEATMGGKSYFAEEGRDINWTVGKENSQ 202
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + N + T G TN A V S S
Sbjct: 203 FNVQYNDKNGNEQKINIAAKSGDDIEELATYINGQTNELSASVTEKGVLQVFMSGETISS 262
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ + + + + ID ++ +G+ +R
Sbjct: 263 PLTFSGSLANELKMGGESDDTVASMNLTTVGGAQRSIDVIDAALQYVDGNRASLGAFQNR 322
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + + ++ D D A E+T L+ Q Q + L+ + L
Sbjct: 323 FESAVNNLTNINENISDSNSQIKDVDFAKETTNLTKNQILTQSSSSILAQAKQAPTAALG 382
Query: 449 LFR 451
L +
Sbjct: 383 LLK 385
>gi|114054832|gb|ABI50016.1| FlaA [Clostridium botulinum]
Length = 271
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + N +++SSGLR++ A D+AA SI++ M++ L+
Sbjct: 2 INHNLNAMNAXRNMGINTGNSAKAMEKLSSGLRINRAGDDAAGLSISEKMRAQIRGLNQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D +IQ E+T L S++
Sbjct: 62 SRNAQDGISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRTAIQEELTSLTSEID 121
Query: 121 DIARGSSFNGENWLRTD 137
IA + FN + L D
Sbjct: 122 RIASTTQFNEKKLLNGD 138
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 37/93 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + I++ IK + K+G+ +R+ + + ++ R+ D D
Sbjct: 179 VADNGTAKASIDSINSAIKSVSTERSKLGAFQNRLEHTIANLDNASENLQAAESRVRDVD 238
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
MA E S QQ A L+ N + +L
Sbjct: 239 MAKEMMNFSKNNILQQAAQAMLAQANQAPQGVL 271
>gi|310644329|ref|YP_003949088.1| flagellin-like protein [Paenibacillus polymyxa SC2]
gi|309249280|gb|ADO58847.1| Flagellin-like protein [Paenibacillus polymyxa SC2]
Length = 275
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 33/220 (15%), Positives = 78/220 (35%), Gaps = 3/220 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+ ++L N +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAAMNTHRQLAVNTGNTNKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D ++Q E+ +L ++
Sbjct: 63 SKNAQDGISLIQTAEGALNETHSILQRMRELSVQSANDTNTTVDRGALQKEVDELSKEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L I + + T + + +
Sbjct: 123 RISSTTEFNTKKLLDGTASGVVFHIGANTGQNISLSIGSMDASTLGVAQSATSGIDISTQ 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
T ++ + + + + + +
Sbjct: 183 TAADAAISTINAAIETVSGERAKLGANQNRLEHTINNLNT 222
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 39/97 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + A + +S I+ I+ + K+G+ +R+ + + + + R+ D D
Sbjct: 179 ISTQTAADAAISTINAAIETVSGERAKLGANQNRLEHTINNLNTSSENLSAAESRIRDVD 238
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + Q A L+ N +L L R
Sbjct: 239 MAKEMMNQTKNNILAQAAQAMLAQANQQPQGVLQLLR 275
>gi|74273842|gb|ABA01569.1| FlaA [Aeromonas hydrophila]
Length = 304
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 41/195 (21%), Positives = 76/195 (38%), Gaps = 3/195 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + N +L+ R++SGLR++ A D+AA IA + S L
Sbjct: 5 INTNVSSLNAQRNLMNTNKSLDTSYTRLASGLRINSAKDDAAGLQIANRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E +QL +++
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYSQLMTEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A+ ++F G+N L+ S A + R TV +S
Sbjct: 125 RVAKDTTFGGQNLLKGGYVGSFQVGADASQTITFRMTTAFTISGMASATSGSATVATTTS 184
Query: 181 TDGTERYGLLDRNHK 195
+
Sbjct: 185 GEPYSITKTAGTPVS 199
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/304 (11%), Positives = 71/304 (23%)
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + G D +++ ++ I+
Sbjct: 1 MGLYINTNVSSLNAQRNLMNTNKSLDTSYTRLASGLRINSAKDDAAGLQIANRLTSQING 60
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + + +
Sbjct: 61 LDQGNRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYSQLM 120
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
A T N + + S +
Sbjct: 121 TEIDRVAKDTTFGGQNLLKGGYVGSFQVGADASQTITFRMTTAFTISGMASATSGSATVA 180
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
E S ++ + D Y K ++ +D IK + ++G++ +R
Sbjct: 181 TTTSGEPYSITKTAGTPVSSTKHVDHYCGKAPPSRAMANLDYMIKVVDSKRAELGAVQNR 240
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + V R+ DAD A+E+ L+ QQ A LS N LS
Sbjct: 241 FDSTIRNQANVSENVSAARSRIRDADFATETANLTKQNILQQAASTILSQANQRPQSALS 300
Query: 449 LFRG 452
L +G
Sbjct: 301 LLQG 304
>gi|261420587|ref|YP_003254269.1| flagellin domain protein [Geobacillus sp. Y412MC61]
gi|297531381|ref|YP_003672656.1| flagellin domain protein [Geobacillus sp. C56-T3]
gi|319768257|ref|YP_004133758.1| flagellin domain protein [Geobacillus sp. Y412MC52]
gi|261377044|gb|ACX79787.1| flagellin domain protein [Geobacillus sp. Y412MC61]
gi|297254633|gb|ADI28079.1| flagellin domain protein [Geobacillus sp. C56-T3]
gi|317113123|gb|ADU95615.1| flagellin domain protein [Geobacillus sp. Y412MC52]
Length = 275
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 41/255 (16%), Positives = 82/255 (32%), Gaps = 3/255 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++A + L N+ +R+SSGLR++ AAD+AA +I++ M+S L
Sbjct: 3 INHNIQALNAYRNLAANQSNISKNLERLSSGLRINRAADDAAGLAISEKMRSQIRGLQMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ +++ SE QL+ ++
Sbjct: 63 ERNALDAISLIQTAEGALNEVHSILQRMRELAVQAANGTNQDTDREALDSEFQQLKDEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN N L + + + I + K D + +
Sbjct: 123 RIGTDTQFNTMNILASGQNITIQLGPNNGQSLTISWEKQKKDSLGEDKKDISSLDIKQVA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
L + + + + ++T L A
Sbjct: 183 NAQAAIAKLDEAIISVSKTRSKMGAYQNRLEHTINNLTTANENLTAAESRIRDTDMAMEM 242
Query: 241 QAKGIATIPVPLPAA 255
I A
Sbjct: 243 AEFTKNNILTQAAQA 257
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 44/126 (34%)
Query: 326 DSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
++ + L + + ++ + + ++ +D I + K+G+
Sbjct: 149 NNGQSLTISWEKQKKDSLGEDKKDISSLDIKQVANAQAAIAKLDEAIISVSKTRSKMGAY 208
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445
+R+ + + + + R+ D DMA E + Q A L+ N
Sbjct: 209 QNRLEHTINNLTTANENLTAAESRIRDTDMAMEMAEFTKNNILTQAAQAMLAQSNQLPQG 268
Query: 446 ILSLFR 451
IL L +
Sbjct: 269 ILQLLK 274
>gi|30059868|gb|AAP13306.1| FliC [Escherichia coli]
Length = 550
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 51/377 (13%), Positives = 101/377 (26%), Gaps = 5/377 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLSGFNVNGGGAVAN 183
Query: 180 STDGTERYGLLDRN--HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + S A + +A
Sbjct: 184 TAASKADLVAANATVVGNKYTVSAGYDAAKASDLLAGVSDGDTVQATINNGFGTAASATN 243
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ + A+ A + + T ++
Sbjct: 244 YKYDSASKSYSFDTTTASAADVQKYLTPGVGDTAKGTITIDGSAQDVQISSDGKITSSNG 303
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
T + K G + + +TL + ID G + ++
Sbjct: 304 DKLYIDTTGRLTKNGFSASLTEASLSTLAANNTKATTIDIGGTSISFTGNSTTPNTITYS 363
Query: 358 KLAMEEMVSFIDTQIKC 374
+ + D +
Sbjct: 364 VTGAKVDQAAFDKAVST 380
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 49/358 (13%), Positives = 93/358 (25%)
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
G S L +++A+ K S
Sbjct: 193 AANATVVGNKYTVSAGYDAAKASDLLAGVSDGDTVQATINNGFGTAASATNYKYDSASKS 252
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
+ V + T D + + +
Sbjct: 253 YSFDTTTASAADVQKYLTPGVGDTAKGTITIDGSAQDVQISSDGKITSSNGDKLYIDTTG 312
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
T + AAN T I + PNT + + A
Sbjct: 313 RLTKNGFSASLTEASLSTLAANNTKATTIDIGGTSISFTGNSTTPNTITYSVTGAKVDQA 372
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
A + +D+ + + T + + + T T +D
Sbjct: 373 AFDKAVSTSGNDVDFTTAGYSVDGATGAVTKGVAPVYIDNNGALTTSDTVDFYLQDDGSV 432
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ V + TDA + + + +D I +G++ +R+
Sbjct: 433 TNGSGKAVYKDADGKLTTDAETKAATTADPLKALDEAISSIDKFRSSLGAVQNRLDSAVT 492
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 493 NLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 550
>gi|30059920|gb|AAP13332.1| FliC [Escherichia coli]
Length = 572
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 46/416 (11%), Positives = 107/416 (25%), Gaps = 11/416 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSQSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR-DDNGKVQITTIDYYLDPETVLLD 178
++ + FNG N L D A I + + ++ + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSSTLKLTGFNVNGSGSVAN 183
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ E + + F + +
Sbjct: 184 TAATKDELAAAAAAAGTTPAVGTDGVTKYTVDAGLNKATAANVFANLADGAVVDASISNG 243
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
F A + + + + + AA +++ D + + +
Sbjct: 244 FGAAAATDYTYNKATNDFTFNASIAAGAAAGDSNSAALQSFLTPKAGDTANLSVKIGTTS 303
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ + + + L + + + A
Sbjct: 304 VNVVLASDGKITAKDGSALYIDSTGNLTQNSAGTVTAATLDGLTKNHDATGAVGVDITTA 363
Query: 359 LAMEEMVSFIDTQIK-------CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
++ ++ S + D +
Sbjct: 364 DGATISLAGSANAATGTQSGAITLKNVRISADALQSAAKGTVINVDNGADDISVSK 419
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/321 (14%), Positives = 90/321 (28%)
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
T + + + + ++ +Q D + + T D
Sbjct: 252 YTYNKATNDFTFNASIAAGAAAGDSNSAALQSFLTPKAGDTANLSVKIGTTSVNVVLASD 311
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
K + D ++ S T T A ATI +
Sbjct: 312 GKITAKDGSALYIDSTGNLTQNSAGTVTAATLDGLTKNHDATGAVGVDITTADGATISLA 371
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
A A + + A + G S++ T
Sbjct: 372 GSANAATGTQSGAITLKNVRISADALQSAAKGTVINVDNGADDISVSKTGVVTTGGAPTY 431
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ + T +T + + V + TDA + + + +D
Sbjct: 432 TDADGKLTTTNTVDYFLQTDGSVTNGSGKGVYTDAAGKFTTDAATKAATTTDPLKALDDA 491
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I +G+I +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 492 ISQIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQA 551
Query: 432 AVQALSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 552 GNSVLAKANQVPQQVLSLLQG 572
>gi|83647166|ref|YP_435601.1| flagellar hook-associated protein FlgL [Hahella chejuensis KCTC
2396]
gi|83635209|gb|ABC31176.1| Flagellin and related hook-associated protein [Hahella chejuensis
KCTC 2396]
Length = 412
Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats.
Identities = 49/447 (10%), Positives = 119/447 (26%), Gaps = 40/447 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + D+ L+ Q ++SSG RV AD+ + + + +
Sbjct: 3 ISTQQLFNRGLDNILDVTSQLQKTQLQISSGRRVLTPADDPVASTRILQINQELSLIDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I L +++ + + +V+ ++ + ++ + ++Q +L +
Sbjct: 63 KSNINLAENRLSLEDGLLDGVGEVIQRLRELTVQAGDGSQNADDKKFIAAEVQQRLSQLV 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ + G + + G + + D+ +
Sbjct: 123 GMLNTKDPSGEYIFAGFQGKQEPFQLNAAGAYRYVGDEGRRFMQIDANVSVAAGDNGKEV 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + P+ + +
Sbjct: 183 FVNIKSANNTFYTQASPRNTAEPPAIITQGQMIDQELYD--------------------- 221
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
P ++ V + Y + SD + T P
Sbjct: 222 ------------AFYPEDMVVVFNDETDVVPPAPNYSIVQRSDGKPVLNNQRYATGQPIQ 269
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
++ + DT ++ L ++ + A + L
Sbjct: 270 VQGVQFEIIGSPQPGDTFFVQSSEKQGLLTTVERLAEGLEDYQDTPAGRQTLTDLLD--S 327
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ ++G+ + I + + + ++ + L D D A + L+
Sbjct: 328 TLANFTNAETKLLETRSRLGARLNTIDDTKQLHEDVEVLTKEVLSELQDLDYAEAVSNLT 387
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLF 450
Q A Q+ S V + LSLF
Sbjct: 388 LQNFVLQAAQQSYSRVTS-----LSLF 409
>gi|2506429|sp|P21989|FLA2_TREPH RecName: Full=Flagellar filament 33 kDa core protein; AltName:
Full=Class B
gi|155061|gb|AAC28741.1| flagellar protein [Treponema phagedenis]
Length = 286
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM A + L + N +++ +++SSGLR++ A D+A+ ++++ M+S L+
Sbjct: 3 INHNMSAMFAQRTLGNTNLSVQKNMEKLSSGLRINRAGDDASGLAVSEKMRSQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S G S + +A++ + + DV+ I+ D IQ E++QL +++
Sbjct: 63 STNAQNGISFIQVAESYLQETTDVIQRIRELSVQSANGIYSAEDRMYIQVEVSQLVAEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
IA + FNG N L T + F N + + + +
Sbjct: 123 RIASHAQFNGMNMLTGRFARETGENTVTASMWFHIGANMDQRTRAYIGTMTAAALGV 179
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 38/98 (38%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
++ + +D IK +G+ +R+ + + + ++ R+ D
Sbjct: 189 NIDDPEKANRAIGTLDEAIKKINKQRADLGAYQNRLEYTVIGVNVAAENLQAAESRIRDV 248
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DMA E + Q Q L+ N +T +LSL R
Sbjct: 249 DMAKEMVDYTKNQILVQSGTAMLAQANQATQSVLSLLR 286
>gi|256005621|ref|ZP_05430579.1| flagellin domain protein [Clostridium thermocellum DSM 2360]
gi|281418810|ref|ZP_06249829.1| flagellin domain protein [Clostridium thermocellum JW20]
gi|255990379|gb|EEU00503.1| flagellin domain protein [Clostridium thermocellum DSM 2360]
gi|281407894|gb|EFB38153.1| flagellin domain protein [Clostridium thermocellum JW20]
gi|316941855|gb|ADU75889.1| flagellin domain protein [Clostridium thermocellum DSM 1313]
Length = 272
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 37/256 (14%), Positives = 86/256 (33%), Gaps = 3/256 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A +A ++L+ E +++SSG R++ A D+AA SI++ M++ L
Sbjct: 3 INNNIMAYNAHRQLKVNASAQEKSLEKLSSGYRINRAGDDAAGLSISEKMRAQIRGLQMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D +IQ E+ +L +++
Sbjct: 63 SKNAQDGISLIQTAEGALTETHAILQRMRELAVQAANDTNVTKDRSAIQLELNELAAEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN + L + I + + + + + +
Sbjct: 123 RIGETTQFNTQKLLDGTFSARVLQIGANKGETLSIEIGDMTATALHVNADNLSVETSEDA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D E + K + + + + + + + + A +
Sbjct: 183 QDTIELVDQAINIVSGERAKLGAKQNRLEHTIKNLDTAAENLQASESRIRDVDMAQEMMN 242
Query: 241 QAKGIATIPVPLPAAP 256
K +
Sbjct: 243 FTKNNILNQAAIAMLA 258
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 39/102 (38%)
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
+A+ + ++ + +D I + K+G+ +R+ + + ++
Sbjct: 170 NADNLSVETSEDAQDTIELVDQAINIVSGERAKLGAKQNRLEHTIKNLDTAAENLQASES 229
Query: 409 RLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R+ D DMA E + Q A+ L+ N +L L
Sbjct: 230 RIRDVDMAQEMMNFTKNNILNQAAIAMLAQANQVPQGVLQLL 271
>gi|114054826|gb|ABI50013.1| FlaA [Clostridium botulinum]
gi|169950575|gb|ACB05820.1| flagellin [Clostridium botulinum]
Length = 276
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRNMGINTGNSGKAMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D +IQ E+T L S++
Sbjct: 63 SRNSQDGISLIQTAEGALNETHSILQRMRELSVQAANDTNVTVDRDAIQKELTSLTSEID 122
Query: 121 DIARGSSFNGENWLRTDLG 139
IA + FN +N L DLG
Sbjct: 123 RIATTTQFNEKNLLNGDLG 141
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 43/136 (31%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ + M + +T A ++ I+ IK
Sbjct: 141 GTTGAKLQIGANADTALTLEVKIAKMDSTALTITATNVKVGTNADATTSITNINNAIKEV 200
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ +G+ +R+ + + ++ R+ D DMA E S QQ A
Sbjct: 201 STQRSGLGAYQNRLEHTIANLDNASENLQAAESRVRDVDMAKEMMNFSKNNILQQAAQAM 260
Query: 436 LSIVNNSTARILSLFR 451
L+ N + +L L R
Sbjct: 261 LAQANQAPQGVLQLLR 276
>gi|47565428|ref|ZP_00236469.1| flagellin [Bacillus cereus G9241]
gi|47557418|gb|EAL15745.1| flagellin [Bacillus cereus G9241]
Length = 286
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG R++ AAD+AA +IA M++ L
Sbjct: 3 INTNINSMRTQEYMRQNQEKMNTSMNRLSSGKRINSAADDAAGLAIATRMRAKENGLGVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A + ++ +++ +++ D K++Q E QL Q+
Sbjct: 63 SRNTQDGISLIRTADSALNSVSNILLRMRDLAVQSANGTNSVDDQKALQKEFGQLIEQID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
+A + FN L+ +
Sbjct: 123 YVAENTKFNDTALLKGGDAVKIQTHDT 149
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 54/142 (38%)
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ +T ++ T + K+ + T+A + + ++ ++ ID
Sbjct: 145 QTHDTGGQIEITLTDVQKASLKGKDGADKDVALEKLQIGRVGTEANDNNVKPKDAITVID 204
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
IK + +G+ +R+ + ++ ++ DADMA E + ++ +
Sbjct: 205 NIIKGIATSRADLGATLNRLDFNVANLNSQASSMASSASQIEDADMAKEMSEMTKFKILN 264
Query: 430 QLAVQALSIVNNSTARILSLFR 451
+ + LS N + + L +
Sbjct: 265 EAGISMLSQANQTPQMVSKLLQ 286
>gi|288554144|ref|YP_003426079.1| flagellin domain-containing protein Fli [Bacillus pseudofirmus OF4]
gi|288545304|gb|ADC49187.1| flagellin domain-containing protein Fli [Bacillus pseudofirmus OF4]
Length = 380
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 35/219 (15%), Positives = 75/219 (34%), Gaps = 3/219 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++ +++ N + ++++SGLR++ A D+AA +I++ M+ L
Sbjct: 3 INNNIPALNTYRQMGVNQQNGQNAMEKLASGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
S G S + A+ + + ++ ++ + + +Q E+ QL ++
Sbjct: 63 SRNSQDGISLIQTAEGALQETHSILQRMRELAVQSSNDTNNDKDREELQKEVDQLAQEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N + + S I + + V +
Sbjct: 123 RIADNTEFNTKNLMGENGFSGKFHIGANAGQDITLSIDNMTSKALGVNEATASAVDVGDY 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
+ +V GT T
Sbjct: 183 ASVKNNTETEITIEFAALGGGAEISETTAVMSEDGTTIT 221
Score = 110 bits (273), Expect = 7e-22, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 48/120 (40%)
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
+ + ++ I D + + A ++ I++ I+ +A K+G++ +R+
Sbjct: 260 ADAAVVTDITVGAATIDTSKGIDISSSQAAASSAITTINSAIETVSAERSKLGAVQNRLE 319
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + ++ R+ D DMA E ++ Q + L+ N + +L L
Sbjct: 320 HTISNLNNSSENLQAAESRIRDVDMAREVMEMTKNNILSQASQAMLAQANQAPQAVLQLL 379
>gi|284989563|ref|YP_003408117.1| flagellin domain-containing protein [Geodermatophilus obscurus DSM
43160]
gi|284062808|gb|ADB73746.1| flagellin domain protein [Geodermatophilus obscurus DSM 43160]
Length = 277
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 89/256 (34%), Gaps = 4/256 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N +A +A + L + + +++SSGLR++ AAD+AA +I++ +++ G L
Sbjct: 5 VNNNIAAFNAYRNLNVTDGQMSKSLEKLSSGLRINRAADDAAGLAISEGLRAQIGGLKVA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE----RGTDSKSIQSEITQLQSQL 119
G S V A+ +++ ++ +++ TD +E L +L
Sbjct: 65 VRNAQDGISVVQTAEGALTETHSILQRMRDLAVQAANDGAVSSTDKAKANAEFQALAKEL 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
DIA ++FNG L + + + + T + +
Sbjct: 125 DDIATKTTFNGTELLDGSYTTKLFQVGANASETLEVSIVDMSASGTAGLFAGAVGDITTQ 184
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T + K+ E L + + ++ LA + A
Sbjct: 185 GNASTAITAVTGAIEKVSTERAKLGAVQNRLEHKINNLNATVENLAASESRIRDTDMAQE 244
Query: 240 DQAKGIATIPVPLPAA 255
+ + I A
Sbjct: 245 MVSFTRSQILSQAGTA 260
Score = 113 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 38/97 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ + I+ + K+G++ +R+ + + + + + R+ D D
Sbjct: 181 ITTQGNASTAITAVTGAIEKVSTERAKLGAVQNRLEHKINNLNATVENLAASESRIRDTD 240
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + Q Q L+ N + +L L R
Sbjct: 241 MAQEMVSFTRSQILSQAGTAMLAQANQGSQGVLQLLR 277
>gi|317177566|dbj|BAJ55355.1| flagellin A [Helicobacter pylori F16]
gi|317179034|dbj|BAJ56822.1| flagellin A [Helicobacter pylori F30]
gi|332673600|gb|AEE70417.1| flagellin A [Helicobacter pylori 83]
Length = 510
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 64/505 (12%), Positives = 139/505 (27%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQANSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N ++ + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKISSSAGTGIGVLAEVINKNSNQTGVKAYASVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR------------------- 281
Q+ ++ + + + S + + + T
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQNGRLNLRSLDG 304
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
G + S + N T +
Sbjct: 305 RGIEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFT 364
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-----ATAAAGKIGS------------ 384
N + + + + + +G+
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGAGVTTLRGAMVVI 424
Query: 385 -----ISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
+ + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|313904253|ref|ZP_07837631.1| flagellin domain protein [Eubacterium cellulosolvens 6]
gi|313470803|gb|EFR66127.1| flagellin domain protein [Eubacterium cellulosolvens 6]
Length = 329
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 46/369 (12%), Positives = 100/369 (27%), Gaps = 43/369 (11%)
Query: 86 DVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSST 142
++ + T + SIQ E+ +L +++ IA + +NG L TD
Sbjct: 1 SMLQRMTTLATQAANGTYNSTSRASIQKEMDELGNEIDRIANNTDYNGIKPLATDSNKGN 60
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
S + + G + +D T+ + +
Sbjct: 61 TSTVNNDSKLNMTMQIGPTKGEVLDLKGQDMTLKGIFNDLDKVSSSGVSVGTTGLNGVTG 120
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
K + + + ++ A D + PA + +
Sbjct: 121 DKGPQAKLKELIDNKKVDNVQAGKDLTNAVRDAMNRADMKGAASVSVTVSPAGSVSISGG 180
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+G + SV +D
Sbjct: 181 DKITGDGADSVK----------------------------------------AALLDAYD 200
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKI 382
+ +K + + + + +V I + I ++ ++
Sbjct: 201 SLDGVQKSKGSTAEGLSDGKEYIQITSSGVEGDDVTANANRVVKNIQSAIDHVSSYRAEL 260
Query: 383 GSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNS 442
G+ +R+ + +++ + R+ D DMA E + Q A L+ N S
Sbjct: 261 GAKQNRLEHTINNLQVTSENTTAAESRIRDTDMAKEMAAYTKNNILSQAAQSMLAQANQS 320
Query: 443 TARILSLFR 451
+LSL +
Sbjct: 321 GQGVLSLLQ 329
>gi|15616178|ref|NP_244483.1| flagellin [Bacillus halodurans C-125]
gi|544311|sp|Q05203|FLA_BACHD RecName: Full=Flagellin
gi|216262|dbj|BAA00952.1| flagellin [Bacillus sp. C125]
gi|10176240|dbj|BAB07335.1| flagellin [Bacillus halodurans C-125]
Length = 272
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 62/148 (41%), Gaps = 3/148 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N AM+A + + + +++SSGLR++ A D+AA +I++ M++ L
Sbjct: 3 INHNLPAMNAHRNMGINLNQGQKAMEKLSSGLRINRAGDDAAGLAISEKMRAQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
S G S + A+ + + ++ ++ D ++ E QL ++
Sbjct: 63 SRNSQDGISLIQTAEGALDEVHSILQRMRELAVQSSNETNVEQDQAALNDEFQQLVEEIE 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKS 148
I + FN + L + + + +
Sbjct: 123 RIKDTTQFNTQKLLDDTVDTVQLQVGAN 150
Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + ID Q+K + +G++ +R+ + + ++ R+ D D
Sbjct: 176 ITDHTNAQSAIDAIDEQLKAVSEGRSYLGAMQNRLEHTIKNLDNASENLQAAESRIRDVD 235
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + Q + L+ N +L L R
Sbjct: 236 MAKEMMEFTRTNILNQASQAMLAQANQQPQAVLQLLR 272
>gi|84514778|ref|ZP_01002141.1| flagellin [Loktanella vestfoldensis SKA53]
gi|84510937|gb|EAQ07391.1| flagellin [Loktanella vestfoldensis SKA53]
Length = 592
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 49/370 (13%), Positives = 110/370 (29%), Gaps = 3/370 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A+ A+ +N ++E +R+S+G R++ A D+AA +IA + S+ +
Sbjct: 5 IATNTGALMAAASATSVNKDMETSMERLSTGKRINSAKDDAAGVAIASRLTSEIRGTNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G + ++ A+ + ++++ ++ TD ++Q+E+T L S++
Sbjct: 65 IRNAQDGQALINTAEGAHKEVVNILQRMRELAVQSSNDTNDATDRTNLQAEMTALTSEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +++ G+N L + + + G ++ + + +
Sbjct: 125 RIAGATAWAGQNLLDGATPNPASLSTTHTDAKVLSLHIGSGTGAGDTIAVNIKAISAAAL 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G S + + T S A +
Sbjct: 185 GVGGTSSTPTVSATLTGSTAAGTLTPTASGTGGTLVVGGGFQATDTYSVTINGVALSVDA 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ A + + + + AA + +D T
Sbjct: 245 DSTDQYADDKNGIATQLKDEIEAALTTVTTGATAAQRALYGITVADNGSGTLTIAQAGPS 304
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T A S + + A ++
Sbjct: 305 VSNVLDTKAGGSTGTLTKTGAGELTFSGLVATGDSFTVDVDGKTYTVTDAAGFTLDDDGF 364
Query: 361 MEEMVSFIDT 370
+V+ I+
Sbjct: 365 ASNLVAQINA 374
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 48/367 (13%), Positives = 95/367 (25%), Gaps = 6/367 (1%)
Query: 86 DVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
V + TQL+ ++ + R G + A
Sbjct: 232 SVTINGVALSVDADSTDQYADDKNGIATQLKDEIEAALTTVTTGATAAQRALYGITVADN 291
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ + + T + + + V+ +
Sbjct: 292 GSGTLTIAQAGPSVSNVLDTKAGGSTGTLTKTGAGELTFSGLVATGDSFTVDVDGKTYTV 351
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
D + + + A A + AA A + +
Sbjct: 352 TDAAGFTLDDDGFASNLVAQINADGVPG------LTATSAAGVVTITRAAAAFTGVAAAS 405
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL 325
+ + + T+ G + + T + N
Sbjct: 406 TIGAASITENAGTFTVAGAGVGSTFSIDIDGTTVTGTVASGDGFGDTNIGVAAQIAQAIK 465
Query: 326 DSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
D + + ++ IDT + +G++
Sbjct: 466 DQGIKGLTVSVGTGVNADKFTLSRDGSVSIASASDAATAIANIDTALTRVNTQRANLGAV 525
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445
S+R+ + + +E G GR+ DAD A+EST L+ Q QQ + L+ N S
Sbjct: 526 SNRLDNTVSNLTNVVINLEGGRGRIEDADFAAESTSLAKSQILQQASTAMLAQANASKQS 585
Query: 446 ILSLFRG 452
+LSL +G
Sbjct: 586 VLSLLQG 592
>gi|34811863|gb|AAQ82717.1| flagellin A [Helicobacter pylori NCTC 11637]
Length = 510
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 69/505 (13%), Positives = 146/505 (28%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILYTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N +V + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG----------------- 283
Q+ ++ + + + S + + + T
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLRSIDG 304
Query: 284 -----------------NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ TK S AK N D++
Sbjct: 305 RGIEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFT 364
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-ATAAAGKI--- 382
+ ++ + +++ + + T G +
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGSGVTTLRGAMVVI 424
Query: 383 ---GSISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
S + + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILGQSGSYAMSQANTVQQNILRLL 509
>gi|6009851|dbj|BAA85090.1| flagellin [Escherichia coli]
gi|30059926|gb|AAP13335.1| FliC [Escherichia coli]
Length = 605
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 51/372 (13%), Positives = 107/372 (28%), Gaps = 3/372 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI S++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLASIQDEIKSRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + + +
Sbjct: 124 DRVSGQTQFNGVNVLSKDGSLKIQVGANDGQTISIDLKKIDSDTLGLNGFNVNGSGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+V + + + + + A ++ ++
Sbjct: 184 KAATISDLTAQKAVDNGNGTYKVTTSNAALTASQALSKLSDGDTVDIATYAGGTSSTVSY 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + + + + D+ ++T
Sbjct: 244 KYDADAGNFSYNNTANKTSAAAGTLADTLLPAAGQTKTGTYKAATGDVNFNVDATGNLTI 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T T+ + TL L + S + T +T T +
Sbjct: 304 GGQQAYLTTDGNLTTNNSGGAATATLKELFTLAGDGKSLGNGGTATVTLDNTTYNFKAAA 363
Query: 360 AMEEMVSFIDTQ 371
+ + I
Sbjct: 364 NVTDGAGVIAAA 375
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 62/414 (14%), Positives = 113/414 (27%), Gaps = 3/414 (0%)
Query: 39 DAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG 98
A DN + A S + G VDIA + V
Sbjct: 195 KAVDNGNGTYKVTTSNAALTA-SQALSKLSDG-DTVDIATYAGGTSSTVSYKYDADAGNF 252
Query: 99 VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN 158
T +K+ + L L A + D+ + + IG
Sbjct: 253 SYNNTANKTSAA-AGTLADTLLPAAGQTKTGTYKAATGDVNFNVDATGNLTIGGQQAYLT 311
Query: 159 GKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+TT + L + T + L + + + G
Sbjct: 312 TDGNLTTNNSGGAATATLKELFTLAGDGKSLGNGGTATVTLDNTTYNFKAAANVTDGAGV 371
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
+ T+ A A A + GS + +
Sbjct: 372 IAAAGVTYTATVSKDVILAQLQSASQAAATATDGDTVATINYKSGVMIGSATFTNGKGTA 431
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
+ V K ST + DT + + S K
Sbjct: 432 DGMTSGTTPVVATGAKAVYVDGNNELTSTASYDTTYSVNADTGAVKVVSGTGTGKFEAVA 491
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ ++ T+ + A ++ ++ +D I +G+I +R+ +
Sbjct: 492 GADAYVSKDGKLTTETTSAGTATKDPLAALDAAISSIDKFRSSLGAIQNRLDSAVTNLNN 551
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 552 TTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 605
>gi|307546942|ref|YP_003899421.1| flagellin [Halomonas elongata DSM 2581]
gi|307218966|emb|CBV44236.1| K02406 flagellin [Halomonas elongata DSM 2581]
Length = 316
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 77/228 (33%), Gaps = 3/228 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I TN +A+ L +L+ Q+R+SSGLR++ AAD+AA +IA M S L
Sbjct: 1 MSVINTNITALIGQNNLGSAQNSLQQAQERLSSGLRINSAADDAAGQAIANRMTSTVTGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQS 117
+ + G S A+ + + D + I+ D SIQ E+ + S
Sbjct: 61 NQAARNANDGISLAQTAEGALDQVNDNLQRIRELTVQAQNDTNTAQDIDSIQEEVNERLS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + FNG + G++T+ + D L
Sbjct: 121 EIDRVTSQTQFNGRDLFENTGGTATSFSIQVGAKDGETIDISIDSARGAAGGLTAGATDT 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
S + V D V T
Sbjct: 181 SVSGGWNMFNDGGIATGSMDVNTIAGVDRTVDADGFDVLSQTAGGTSN 228
Score = 100 bits (247), Expect = 7e-19, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 45/137 (32%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ D + + V + +S +D ++
Sbjct: 179 DTSVSGGWNMFNDGGIATGSMDVNTIAGVDRTVDADGFDVLSQTAGGTSNALSIVDDRLA 238
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R D I+ ++ R+ DAD A E + ++ Q +Q
Sbjct: 239 AVDEARSNLGAMQNRFETALDNIETTSTNLQSARSRIEDADYAEEVSNMTRAQILEQAGT 298
Query: 434 QALSIVNNSTARILSLF 450
L+ N S +LSL
Sbjct: 299 SILAQANQSPQSVLSLL 315
>gi|4091903|gb|AAC99334.1| flagellin [Leptospira interrogans]
Length = 283
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 32/255 (12%), Positives = 80/255 (31%), Gaps = 3/255 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + L+ ++ +SSG+R++ AAD+A+ ++++ +++ L
Sbjct: 3 INHNLSAVNAHRSLKFNELAVDKTMKALSSGMRINSAADDASGLAVSEKLRTQVNGLRQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + A+ + + +++ I+ D + +Q E++ L ++
Sbjct: 63 ERNTEDGMSFIQTAEGFLEQTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + + ++ + I T+
Sbjct: 123 RIASQAEFNKFKLFEGQFARGSRVASMWFHMGPNQNQRERFYIGTMTSKALKLVKADGRP 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ D + + + L + + D
Sbjct: 183 IAISSPGEANDVIGLADAALTKIMKQRADMGAYYNWLEYTAKGLMGAYENMQASESRIRD 242
Query: 241 QAKGIATIPVPLPAA 255
+ +
Sbjct: 243 ADMAEEVVSLTTKQI 257
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 34/97 (35%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ D + +G+ + + + + ++ R+ DAD
Sbjct: 185 ISSPGEANDVIGLADAALTKIMKQRADMGAYYNWLEYTAKGLMGAYENMQASESRIRDAD 244
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E L+ Q Q L+ N +L L +
Sbjct: 245 MAEEVVSLTTKQILVQSGTAMLAQANMKPNSVLKLLQ 281
>gi|110642029|ref|YP_669759.1| flagellin [Escherichia coli 536]
gi|191173337|ref|ZP_03034867.1| flagellin [Escherichia coli F11]
gi|300982293|ref|ZP_07176002.1| bacterial flagellin [Escherichia coli MS 200-1]
gi|110343621|gb|ABG69858.1| flagellin [Escherichia coli 536]
gi|190906454|gb|EDV66063.1| flagellin [Escherichia coli F11]
gi|300307253|gb|EFJ61773.1| bacterial flagellin [Escherichia coli MS 200-1]
gi|324007297|gb|EGB76516.1| bacterial flagellin [Escherichia coli MS 57-2]
gi|324013477|gb|EGB82696.1| bacterial flagellin [Escherichia coli MS 60-1]
Length = 555
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 3/154 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
++ + FNG N L D A
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTIT 157
Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats.
Identities = 45/319 (14%), Positives = 92/319 (28%)
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
+ ++ + ++ + +T T++ +L +
Sbjct: 237 FAAGATGNAYKFNQANNTFTYNTTSTAAELQSYLTPKAGDTATFSVEIGSTKQDVVLASD 296
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
KI + ID + T + A A +
Sbjct: 297 GKITAKDGSKLYIDTTGNLTQNGGGTLEEATLNGLAFNHSGPAAAVQSTITTADGTSIVL 356
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
A TT SA + + + T +
Sbjct: 357 AGSGDFGTTKTAGAINVTGAVISADALLSASKATGFTSGAYTVGTDGVVKSGGNDVYNKA 416
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ T++TT +D + V ++ T TDA + + + +D I
Sbjct: 417 DGTGLTTDNTTKYYLQDDGSVTNGSGKAVYVDATGKLTTDAETKAATTADPLKALDEAIS 476
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 477 SIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGN 536
Query: 434 QALSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 537 SVLAKANQVPQQVLSLLQG 555
>gi|121596100|ref|YP_987996.1| flagellin domain-containing protein [Acidovorax sp. JS42]
gi|120608180|gb|ABM43920.1| flagellin domain protein [Acidovorax sp. JS42]
Length = 279
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 89/229 (38%), Gaps = 3/229 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I TN S+++A + L +L R+SSGLRV+ A D+AA +IA+ M + ++
Sbjct: 3 STINTNISSLNAQRNLNTSQASLSTSMQRLSSGLRVNSAKDDAAGLAIAERMNTQVRGMN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ + K D + ++ D S+ E L S+
Sbjct: 63 VAIRNANDGVSLAQTAEGALGKVGDSLQRMRELAVQARNSTNSNDDKDSLDKEYQALASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ + G++FNG++ L D G+ T I + D + +
Sbjct: 123 ITRVLGGTTFNGKHILGADAGTLTFQIGANTTADDSIDVVTTDMTGDATITAVTGGKIDN 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
++T T + + + + +K D + IS + +
Sbjct: 183 TATTATLKTVIDNIDTALKTVNSKRADFGAAQNRFDAVISNLQVSVENQ 231
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 46/137 (33%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + T+ D ++ ++ IDT +K
Sbjct: 143 GTLTFQIGANTTADDSIDVVTTDMTGDATITAVTGGKIDNTATTATLKTVIDNIDTALKT 202
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ G+ +R +++ + R++DAD ASE+ LS Q QQ
Sbjct: 203 VNSKRADFGAAQNRFDAVISNLQVSVENQSAARSRIMDADFASETANLSRSQILQQAGTA 262
Query: 435 ALSIVNNSTARILSLFR 451
++ N +LSL R
Sbjct: 263 MVAQANQLPQGVLSLLR 279
>gi|2735927|gb|AAB94024.1| periplasmic flagellin [Leptospira interrogans]
Length = 283
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 32/255 (12%), Positives = 80/255 (31%), Gaps = 3/255 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + L+ ++ +SSG+R++ AAD+A+ ++++ +++ L
Sbjct: 3 INHNLSAVNAHRSLKFNELAVDKTMKALSSGMRINSAADDASGLAVSEKLRTQVNGLRQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + A+ + + +++ I+ D + +Q E++ L ++
Sbjct: 63 ERNTEDGMSFIQTAEGFLEQTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + + ++ + I T+
Sbjct: 123 RIASQAEFNKFKLFEGQFARGSRVASMWFHMGPNQNQRERFYIGTMTSKALKLVKADGRP 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ D + + + L + + D
Sbjct: 183 IAISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRD 242
Query: 241 QAKGIATIPVPLPAA 255
+ +
Sbjct: 243 ADMAEEVVSLTTKQI 257
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ D + +G+ +R+ + + ++ R+ DAD
Sbjct: 185 ISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDAD 244
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E L+ Q Q L+ N +L L +
Sbjct: 245 MAEEVVSLTTKQILVQSGTAMLARANMKPNSVLKLLQ 281
>gi|333003011|gb|EGK22565.1| flagellin [Shigella flexneri VA-6]
Length = 550
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 51/377 (13%), Positives = 102/377 (27%), Gaps = 5/377 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGGGAVAN 183
Query: 180 STDGTERYGLLDRN--HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + S A + +A
Sbjct: 184 TAASKADLVAANATVVGNKYTVSAGYDAAKASDLLAGVSDGDTVQATINNGFGTAASATN 243
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ + A+ A + + T ++
Sbjct: 244 YKYDSASKSYSFDTTTASAADVQKYLTPGVGDTAKGTITIDGSAQDVQISSDGKITASNG 303
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
T + K G+ + +TL + ID G + ++
Sbjct: 304 DKLYIDTTGRLTKNGSGASLTEASLSTLAANNTKATTIDIGGTSISFTGNSTTPDTITYS 363
Query: 358 KLAMEEMVSFIDTQIKC 374
+ + D +
Sbjct: 364 VTGAKVDQAAFDKAVST 380
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/358 (12%), Positives = 93/358 (25%)
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
G S L +++A+ K S
Sbjct: 193 AANATVVGNKYTVSAGYDAAKASDLLAGVSDGDTVQATINNGFGTAASATNYKYDSASKS 252
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
+ V + T D + + +
Sbjct: 253 YSFDTTTASAADVQKYLTPGVGDTAKGTITIDGSAQDVQISSDGKITASNGDKLYIDTTG 312
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
T + AAN T I + P+T + + A
Sbjct: 313 RLTKNGSGASLTEASLSTLAANNTKATTIDIGGTSISFTGNSTTPDTITYSVTGAKVDQA 372
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
A + +++ + + T + + + + T T +D
Sbjct: 373 AFDKAVSTSGNNVDFTTVGYSVNGTTGAVTKGVDSVYVDNNEALTTSDTVDFYLQDDGSV 432
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ V + TDA + + + +D I +G++ +R+
Sbjct: 433 TNGSGKAVYKDADGKLTTDAETKAATTADPLKALDEAISSIDKFRSSLGAVQNRLDSAVT 492
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + + R+ DAD A+E + +S Q Q L+ N ++LSL +G
Sbjct: 493 NLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIILQAGNSVLAKANQVPQQVLSLLQG 550
>gi|86157765|ref|YP_464550.1| flagellin-like [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774276|gb|ABC81113.1| flagellin-like protein [Anaeromyxobacter dehalogenans 2CP-C]
Length = 279
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN ++++A + L +LE R+SSG R++ A D+AA +I+ +++ + +
Sbjct: 3 LSIRTNLASLNAQRNLSSTQTSLESSMSRLSSGYRITRAGDDAAGLAISTKLEAQIRSYN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQ 118
+ G S + +A +++ +V+S ++ G T+ +Q+E QL+++
Sbjct: 63 QAARNANDGLSVIQTTEAALNETSNVLSRLRELAMQAASDGIGATERGYVQAEADQLRAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIA 146
+ IA + ++G L + +
Sbjct: 123 IDRIAAVTKYDGTPLLDGSGTALGFQVG 150
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 44/98 (44%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +S +D ++ + + +G++ +R I+ +A+ R+ DAD
Sbjct: 182 FTTAAGARDALSTLDAALETISRSRADLGAVGNRFQSTIANIQSFAEALSAANSRIRDAD 241
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+A E++RL+ QQ V L+ N + L L G
Sbjct: 242 VAEETSRLARANILQQAGVAVLAQANQAPQLALKLLGG 279
>gi|114054878|gb|ABI50039.1| FlaA [Clostridium botulinum]
Length = 265
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 75/193 (38%), Gaps = 3/193 (1%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L S
Sbjct: 1 NHNLNAMNAXRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQAS 60
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
S + A+ +++ ++ ++ G D ++I++EIT+L +++
Sbjct: 61 RNSQDSISLIQTAEGALTETHSILQRMRELAVQGTNDTNVTADREAIKTEITELNNEINR 120
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I++ + FN + L I + + T + + +
Sbjct: 121 ISQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLSIGDMSAKTLGVSGVSVSXAXXATDS 180
Query: 182 DGTERYGLLDRNH 194
T L +
Sbjct: 181 IXTIDTALGKVST 193
Score = 77.5 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 38/111 (34%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + + + + IDT + + K+G+ +R+ + +
Sbjct: 155 SIGDMSAKTLGVSGVSVSXAXXATDSIXTIDTALGKVSTERAKLGANQNRLXHTINNLNT 214
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
+ ++ R+ DMA E S Q A + N + +L L
Sbjct: 215 SSENLQAAESRVRXVDMAKEMMAFSKNNILNQAAQAMXAQANQAPQGVLQL 265
>gi|30059870|gb|AAP13307.1| FliC [Escherichia coli]
Length = 562
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 77/257 (29%), Gaps = 3/257 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSQSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + + + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSSTLNLTGFNVNGSGSVAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + VS T + + S
Sbjct: 184 TAATKADLTAAQLSAPGAADANGTVTYTVSAGYKESTAADVIASIKDGSAPTSAITATIN 243
Query: 240 DQAKGIATIPVPLPAAP 256
+ + +
Sbjct: 244 NGFGDSSALTSNDYTYD 260
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 53/138 (38%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ T++TT + + V + TDA + + + +D I
Sbjct: 425 DGSLTTDNTTKLYLQKDGSVTNGSGKAVYVEADGDFTTDAATKAATTTDPLKALDEAISQ 484
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G+I +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 485 IDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNS 544
Query: 435 ALSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 545 VLAKANQVPQQVLSLLQG 562
>gi|327441339|dbj|BAK17704.1| flagellin [Solibacillus silvestris StLB046]
Length = 270
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 73/194 (37%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++ + L N +++SSG +V+ A D+AA +I++ M+ L
Sbjct: 3 IQHNISALNTHRNLTANNAQASKNLEKLSSGYKVNRAGDDAAGLAISEKMRGQIRGLDMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ S + A+ +++ ++ ++ D ++Q E+ L S++
Sbjct: 63 TKNAQDSISLIQTAEGALNETHSILQRMRELAVQSSNDTNVTADRTALQKEVDALVSEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L + I + + +G + + L +
Sbjct: 123 RISKNTEFNTQKLLSGGFSTKKFHIGANKDQAISLTISGMGAGKLGISAIKIDAQTLANK 182
Query: 181 TDGTERYGLLDRNH 194
T L +
Sbjct: 183 AISTVNVALEKVST 196
Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 38/96 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + +S ++ ++ + K+G++ +R+ + + + + R+ D D
Sbjct: 174 IDAQTLANKAISTVNVALEKVSTERSKLGAVQNRLEHTVNNLGATSENLTAAESRIRDTD 233
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA E + Q A L+ N +L L
Sbjct: 234 MAKEMMGFTKNNILMQAAQSMLAQANQQPQGVLQLL 269
>gi|38324518|gb|AAR16426.1| flagellin [Pasteurella multocida]
Length = 329
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 99/290 (34%), Gaps = 3/290 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + + +L R+S+G R++ A D+AA IA + S L+
Sbjct: 3 LTVNTNIASLNTQRNLNNSSASLNTSLQRLSTGSRINSAKDDAAGLQIANRLTSQVNGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S A+ + ++ +++ +++ ++ ++ E+ QLQ +
Sbjct: 63 VATKNANDGISLAQTAEGALQQSTNILQRMRDLSLQSANGSNSDSERTALNGEVKQLQKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I+ ++F G L G ++ + + + + Y +
Sbjct: 123 LDRISNTTTFGGRKLLDGSFGVASFQVGSAANEIISVGIDEMSAESLNGTYFKADGGGAV 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ + + + + + A
Sbjct: 183 TAATASGTVDIAIGITGGSAVNVKVDMKGNETAEQAAAKIAAAVNDANVGIGAFTDGAQI 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
+K A + A +T S +G+ + + + + DI
Sbjct: 243 SYVSKASADGTTSAVSGVAITDTGSTGAGTAAGTTTFTEANDTVAKIDIS 292
>gi|261252311|ref|ZP_05944884.1| flagellin protein FlaF [Vibrio orientalis CIP 102891]
gi|260935702|gb|EEX91691.1| flagellin protein FlaF [Vibrio orientalis CIP 102891]
Length = 377
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 47/357 (13%), Positives = 104/357 (29%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + L +R++SG R++ A D+AA I+ ++S L
Sbjct: 4 TVNTNVSAMTAQRHLTNATDLLNQSLERLASGNRINSAKDDAAGLQISNRLESQMRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ +++ +++ + ++Q E+ L +L
Sbjct: 64 AMRNANDGISIMQTAEGAMNETTNLLQRMRDLSLQSANGSNSRAERDALQEEMGALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L SS+ I S + +
Sbjct: 124 NRIAETTSFGGRKLLNGSFSSSSFQIGASSGEAVQVSLKNMRSDSLDMGGFSYIAAGKAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S+ + + Q + T +
Sbjct: 184 SSWQVSQGSQDLTMQYTNAQGQQESINITAKSGDDIEELATYINGQTDKLSASVNEEGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + + + + + V T N + S
Sbjct: 244 QIFMAGKETAGTISFSGGLASELNMNLAGYEAVDNIDISEVGGAQRAVSVLDTALNYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + + + L + K+ D + + + +
Sbjct: 304 HRAELGAMQNRFNHAINNLSNVNENLSASNSRIKDTDYAKETTQMVKQQILQQVSTS 360
Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/375 (11%), Positives = 106/375 (28%), Gaps = 11/375 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
A+ ++ A D+++ ++ + + + +
Sbjct: 13 TAQRHLTNATDLLNQSLERLA-----SGNRINSAKDDAAGLQISNRLESQMRGLDVAMRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + ++ D+ +
Sbjct: 68 ANDGISIMQTAEGAMNETTNLLQRMRDLSLQSANGSNSRAERDALQEEMGALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ S +S I + S +++ + IA
Sbjct: 128 ETTSFGGRKLLNGSFSSSSFQIGASSGEAVQVSLKNMRSDSLDMGGFSYIAAGKADSSWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
+ + + + S DI AT N T + + ++
Sbjct: 188 VSQGSQDLTMQYTNAQGQQESINITAKSGDDIEELATYINGQTDKLSASVNEEGQLQIFM 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+T T S + + + +E + VS +DT +
Sbjct: 248 AGKETAGTISFSGGLASELNMNLAGYEA------VDNIDISEVGGAQRAVSVLDTALNYV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ ++G++ +R + + + + + + R+ D D A E+T++ Q QQ++
Sbjct: 302 DSHRAELGAMQNRFNHAINNLSNVNENLSASNSRIKDTDYAKETTQMVKQQILQQVSTSI 361
Query: 436 LSIVNNSTARILSLF 450
L+ ++L
Sbjct: 362 LAQAKQQPNLAITLL 376
>gi|260682017|ref|YP_003213302.1| flagellin subunit [Clostridium difficile CD196]
gi|260685615|ref|YP_003216748.1| flagellin subunit [Clostridium difficile R20291]
gi|260208180|emb|CBA60508.1| flagellin subunit [Clostridium difficile CD196]
gi|260211631|emb|CBE01876.1| flagellin subunit [Clostridium difficile R20291]
Length = 319
Score = 124 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 74/203 (36%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN SA+ A+ ++ +++SSG+R+ AAD+AA +I++ M++ L
Sbjct: 32 VNTNVSALIANNQMGRNVNAQSKSMEKLSSGVRIKRAADDAAGLAISEKMRAQIKGLDQA 91
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ G S V A+ + + +++ ++ + + I E+ QL+ ++
Sbjct: 92 GRNVQDGISVVQTAEGALEETGNILQRMRTLSVQSSNETNTAEERQKIADELLQLKDEVE 151
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ FNG+ L + + + N +I +
Sbjct: 152 RISSSIEFNGKKLLDGSSTEIRLQVGANFGTNVAGTTNNNNEIKVALVNTSSIMSKAGIT 211
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
+ + + V
Sbjct: 212 SSTIASLNADGTSGTDAAKQMVS 234
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 54/137 (39%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T+ T + + + +T + N D + A ++MVS +D +K
Sbjct: 182 TNVAGTTNNNNEIKVALVNTSSIMSKAGITSSTIASLNADGTSGTDAAKQMVSSLDVALK 241
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ K+G+ +R+ ++ + + V R+ D D+ASE LS + Q +
Sbjct: 242 ELNTSRAKLGAQQNRLESTQNNLNNTIENVTAAESRIRDTDVASEMVNLSKMNILVQASQ 301
Query: 434 QALSIVNNSTARILSLF 450
L+ N +L L
Sbjct: 302 SMLAQANQQPQGVLQLL 318
>gi|152985351|ref|YP_001349632.1| A-type flagellin [Pseudomonas aeruginosa PA7]
gi|3386642|gb|AAC28556.1| flagellin [Pseudomonas aeruginosa]
gi|150960509|gb|ABR82534.1| A-type flagellin [Pseudomonas aeruginosa PA7]
Length = 387
Score = 124 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 38/290 (13%), Positives = 99/290 (34%), Gaps = 3/290 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + + +L R+S+G R++ A D+AA IA + S L+
Sbjct: 3 LTVNTNIASLNTQRNLNNSSASLNTSLQRLSTGSRINSAKDDAAGLQIANRLTSQVNGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S A+ + ++ +++ +++ ++ ++ E+ QLQ +
Sbjct: 63 VATKNANDGISLAQTAEGALQQSTNILQRMRDLSLQSANGSNSDSERTALNGEVKQLQKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I+ ++F G L G ++ + + + + Y +
Sbjct: 123 LDRISNTTTFGGRKLLDGSFGVASFQVGSAANEIISVGIDEMSAESLNGTYFKADGGGAV 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ + + + + + A +
Sbjct: 183 TAATASGTVDIALGITGGSTVNVKVDMKGNETAEQAAAKIAAAVNDANVGIGAFSDGDTI 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
+K A + +T S +G+ + + + + DI
Sbjct: 243 SYVSKASADGTTSAVSGVVITDTGSTGAGAAASTSTFTEANDTVAKIDIS 292
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 46/403 (11%), Positives = 104/403 (25%), Gaps = 16/403 (3%)
Query: 49 IAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI 108
+A + ++ +L+ + S+ ++ + +S + D +
Sbjct: 1 MALTVNTNIASLNT-QRNLNNSSASLNTSLQRLSTGSRI------------NSAKDDAAG 47
Query: 109 QSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
+L SQ+ + + + + +++
Sbjct: 48 LQIANRLTSQVNGLNVATKNANDGISLAQTAEGALQQSTNILQRMRDLSLQSANG---SN 104
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
T L + + + V+ + +
Sbjct: 105 SDSERTALNGEVKQLQKELDRISNTTTFGGRKLLDGSFGVASFQVGSAANEIISVGIDEM 164
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
A G T A T G++ + + + T +
Sbjct: 165 SAESLNGTYFKADGGGAVTAATASGTVDIALGITGGSTVNVKVDMKGNETAEQAAAKIAA 224
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR 348
I + + + S + + + +
Sbjct: 225 AVNDANVGIGAFSDGDTISYVSKASADGTTSAVSGVVITDTGSTGAGAAASTSTFTEAND 284
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
+ + V ID IK A +G++ +R + +K + + V G
Sbjct: 285 TVAKIDISTAKGAQSAVLVIDEAIKQIDAQRADLGAVQNRFDNTINNLKNIGENVSAARG 344
Query: 409 RLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D D A+E+ L+ Q QQ L+ N +LSL R
Sbjct: 345 RIEDTDFAAETANLTKNQVLQQAGTAILAQANQLPQSVLSLLR 387
>gi|328555241|gb|AEB25733.1| flagellin protein [Bacillus amyloliquefaciens TA208]
gi|328913602|gb|AEB65198.1| flagellin protein [Bacillus amyloliquefaciens LL3]
Length = 328
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 47/300 (15%), Positives = 100/300 (33%), Gaps = 3/300 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ S++L + +++SSGLR++ A D+AA +I++ M+S L
Sbjct: 3 INHNIAALNTSRQLNAGSNAASKNMEKLSSGLRINRAGDDAAGLAISEKMRSQIRGLDMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + ++ +++ ++ + T +D +Q E+ QL S++
Sbjct: 63 SKNAQDGISLIQTSEGALNETHSILQRMSELATQAANDTNTDSDRSELQKEMDQLASEVT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L T I + + N +
Sbjct: 123 RISTDTEFNTKKLLDGTAKDLTFQIGANEGQTMSLSINKMDSESLKVGTTYTANTDGSKL 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ L + D + S + K + KAA++
Sbjct: 183 VTADGKEATLVTDGSKGPNGYYDTDDKLVYQADSALAADTKVTKGIDISSSAKAASSALT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
K A A + + + + + T D+ + + ++
Sbjct: 243 TIKTAIDTVSSERAKLGAVQNRLEHTINNLGTSSENLTSAESRIRDVDMASEMMEYTKNN 302
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 30/252 (11%), Positives = 66/252 (26%)
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
+ + + S+ ++T+ T + A + I
Sbjct: 65 NAQDGISLIQTSEGALNETHSILQRMSELATQAANDTNTDSDRSELQKEMDQLASEVTRI 124
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
+ + T N + T++ +
Sbjct: 125 STDTEFNTKKLLDGTAKDLTFQIGANEGQTMSLSINKMDSESLKVGTTYTANTDGSKLVT 184
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
A D K + S + + D + A ++ I
Sbjct: 185 ADGKEATLVTDGSKGPNGYYDTDDKLVYQADSALAADTKVTKGIDISSSAKAASSALTTI 244
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
T I ++ K+G++ +R+ + + + + R+ D DMASE +
Sbjct: 245 KTAIDTVSSERAKLGAVQNRLEHTINNLGTSSENLTSAESRIRDVDMASEMMEYTKNNIL 304
Query: 429 QQLAVQALSIVN 440
Q + L+ N
Sbjct: 305 TQASQAMLAQAN 316
>gi|114054933|gb|ABI50066.1| FlaA [Clostridium botulinum]
Length = 260
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 72/181 (39%), Gaps = 3/181 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 1 INHNLNAMNAXRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ G D +I++EIT+L +++
Sbjct: 61 SRNSQDSISLIQTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEIN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L I + + T + +
Sbjct: 121 RISQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLTIGDMSAKTLGVSGVSVSDASKATD 180
Query: 181 T 181
+
Sbjct: 181 S 181
Score = 77.9 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 32/89 (35%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T + + ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 158 GDMSAKTLGVSGVSVSDASKATDSIATIDKALGTVSTERAKLGANQNRLEHTINNLNTSS 217
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ ++ R+ D DMA E S
Sbjct: 218 ENLQAAESRVRDVDMAKEMMAFSKNNILN 246
>gi|213584107|ref|ZP_03365933.1| flagellin [Salmonella enterica subsp. enterica serovar Typhi str.
E98-0664]
Length = 297
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 31/204 (15%), Positives = 59/204 (28%)
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
A + + K+ V ++MG+ K + T +
Sbjct: 94 AAGVTGADKDNTSLVKLSFEDKNGKVIDGGYAVKMGDDFYAATYDEKTGAITAKTTTYTD 153
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
V T + S + + R E +
Sbjct: 154 GTGVAQTGAVKFGGANGKSEVVTATDGKTYLASDLDKHNFRTGGELKEVNTDKTENPLQK 213
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
ID + +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 214 IDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQI 273
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 274 LQQAGTSVLAQANQVPQNVLSLLR 297
>gi|302875227|ref|YP_003843860.1| flagellin domain-containing protein [Clostridium cellulovorans
743B]
gi|302578084|gb|ADL52096.1| flagellin domain protein [Clostridium cellulovorans 743B]
Length = 276
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N +AM+A + + N +++SSGLR++ A D+A SI++ M++ L+
Sbjct: 2 VINHNLNAMNAQRNMSINNGGAAKSMEKLSSGLRINRAGDDAVGLSISEKMRAQIRGLNQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
S G S + A+ +++ ++ ++ D ++I +EI L +++
Sbjct: 62 ASRNAQDGISLIQTAEGALNETQSILQRMRELAVQAANDTNVTIDRQAIGAEIKTLATEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASI 145
IA + FN +N L L S +
Sbjct: 122 NRIASTTQFNEKNLLNGSLSSPGTGV 147
Score = 84.0 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 39/97 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + +S I+ IK + +G+ +R+ + + ++ R+ D D
Sbjct: 180 ISTNTSATDSISKINDAIKIVSTQRSNLGANQNRLEHTIANLDNASENLQAAESRVRDVD 239
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + QQ A L+ N + +L L R
Sbjct: 240 MAKEMMSFTKNNILQQAAQAMLAQANQAPQNVLQLLR 276
>gi|254473373|ref|ZP_05086770.1| flAgellin a protein [Pseudovibrio sp. JE062]
gi|211957489|gb|EEA92692.1| flAgellin a protein [Pseudovibrio sp. JE062]
Length = 393
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 112/451 (24%), Positives = 173/451 (38%), Gaps = 58/451 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+S+LTN SAM A LR IN ++ Q+R+S+G+RV+DA+DNAAYWSIA MKSDN AL
Sbjct: 1 MSSLLTNSSAMVALTTLRGINDSMATTQNRISTGMRVADASDNAAYWSIATTMKSDNSAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV D++GLG++ VD+A M
Sbjct: 61 SAVKDSLGLGAATVDVAFTAM--------------------------------------D 82
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
S + G+ ++ I + T + + +
Sbjct: 83 QTVDIVSQIKDKLTAATNGTVDRGKIQADIEQLQKQLETIASSATFSGENWLQQDMATDA 142
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ ++ D +V + + + T +
Sbjct: 143 LNKEIAGSFTRDAAGNTQIENIVVDTRTTVLVDTRATAADNTGILTENLMGDAHGTLAMT 202
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + K A G +D KN+
Sbjct: 203 RGDINSLDVPAGAGGDGILRKAVEAAIVKYYDGLDDAAKADFGITDSGTPIADKNATEIA 262
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T+ A G T ++ S +L +
Sbjct: 263 AEVTDRLEALSGTTPTTLEAVSFLDIDISELGNNAVDNGILA------------------ 304
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ +D Q+ T AA ++GS +R+ +Q++F + DA+++G+G+LVDADM +EST
Sbjct: 305 --AYIDVVDGQLSAITDAATELGSAKARVDMQKEFASNLSDAIDRGIGQLVDADMNAEST 362
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
RL ALQTQQQL +QALSI N+ + ILSLFR
Sbjct: 363 RLQALQTQQQLGIQALSIANSGSQNILSLFR 393
>gi|114054931|gb|ABI50065.1| FlaA [Clostridium botulinum]
Length = 266
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 79/193 (40%), Gaps = 3/193 (1%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L S
Sbjct: 1 NHNLNAMNAHRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQAS 60
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
S + A+ +++ ++ ++ G D +I++EIT+L +++
Sbjct: 61 RNSQDSISLIQTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEINR 120
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I++ + FN + L + T I + + T + T L +++
Sbjct: 121 ISKQTEFNTQKLLSGGFSAKTFQIGANKAQTLTLTIGDMSAKTLGVSGVSVSTAALATAS 180
Query: 182 DGTERYGLLDRNH 194
T L +
Sbjct: 181 IETIDTALGKVST 193
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 39/110 (35%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T + + + + IDT + + K+G+ +R+ + +
Sbjct: 157 GDMSAKTLGVSGVSVSTAALATASIETIDTALGKVSTERAKLGANQNRLEHTINNLNTSS 216
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ ++ R+ D DMA E S Q A L+ N + +L L
Sbjct: 217 ENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLL 266
>gi|307314170|ref|ZP_07593780.1| flagellin domain protein [Escherichia coli W]
gi|30059924|gb|AAP13334.1| FliC [Escherichia coli]
gi|306906139|gb|EFN36657.1| flagellin domain protein [Escherichia coli W]
gi|315061223|gb|ADT75550.1| flagellar filament structural protein (flagellin) [Escherichia coli
W]
gi|323186300|gb|EFZ71650.1| flagellin [Escherichia coli 1357]
gi|323378200|gb|ADX50468.1| flagellin domain protein [Escherichia coli KO11]
Length = 564
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 54/358 (15%), Positives = 101/358 (28%), Gaps = 3/358 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
N V + + + +A + + A+
Sbjct: 184 KAATISDLAATGANVTNSSNIVVTTKFNALDAATAFSKLKDGDSVAVAAQKYTYNASTND 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A +G S S + + A + S K +
Sbjct: 244 FTTENTVATGTATTDLGATLKAAAGQSQSGTYTFANGKVNFDVDASGNITIGGEKAFLVG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
TN T + + D+ + Y N T +
Sbjct: 304 GALTTNDPTGSTPATMSSLFKAADDKDAAQSSIDFGGKKYEFAGGNSTNGGGVKFKDT 361
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/387 (12%), Positives = 110/387 (28%), Gaps = 5/387 (1%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
S + A ++ + +++ T K + K S Q + +
Sbjct: 183 NKAATISDLAATGANVTNSSNIVVTTKFNALDAATAFSKLKDGDSVAVAAQKYTYNASTN 242
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+ + K+ G + +
Sbjct: 243 DFTTENTVATGTATTDLGATLKAAAGQSQSGTYTFANGKVNFDVDASGNITIGGE----- 297
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
+ L+ S++ A+ + + + A + +
Sbjct: 298 KAFLVGGALTTNDPTGSTPATMSSLFKAADDKDAAQSSIDFGGKKYEFAGGNSTNGGGVK 357
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
V A A S + K ++ + + A + + G
Sbjct: 358 FKDTVSSDALLAQVKADSTANNVKITFNNGPLSFTASFQNGVSGSAASNAAYIDSEGELT 417
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+T + N DT + ++ K + + + T+ + A ++ +
Sbjct: 418 TTESYNTNYSVDKDTGAVSVTGGSGTGKYAANVGAQAYVGADGKLTTNTTSTGSATKDPL 477
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ +D I +G+I +R+ + + + R+ DAD A+E + +S
Sbjct: 478 NALDEAIASIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKA 537
Query: 426 QTQQQLAVQALSIVNNSTARILSLFRG 452
Q QQ L+ N ++LSL +G
Sbjct: 538 QIIQQAGNSVLAKANQVPQQVLSLLQG 564
>gi|319403778|emb|CBI77362.1| Flagellin [Bartonella rochalimae ATCC BAA-1498]
Length = 395
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 86/450 (19%), Positives = 156/450 (34%), Gaps = 58/450 (12%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
TS+LTN SAM+A Q LR+I+ NL+ +DRVS+GLR+++A++N AYWSI+
Sbjct: 3 TSLLTNKSAMTALQTLRNIDANLDRSKDRVSTGLRINNASENTAYWSIS----------- 51
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
S + MS +D ++ K ++ I L + D
Sbjct: 52 ----------SMMRHDSNTMSAIVDAINLGKEQV-----------GIADTAIGLTKEALD 90
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ S + D+ S+ ++ + I +
Sbjct: 91 DIQKSMVSAREKGSDDISKIQDSVIGNMKNISNAVQSASFGGKNILSNGGQTVGMAGGYR 150
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ + + D ++ G +S + T
Sbjct: 151 REGTAVYVDMIDVGGPELNFGVIGPDGAIDMTQGVLSGIFGTSEGDAIEKGIETFGTAHT 210
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + + + + + D +
Sbjct: 211 KFKELEDVAVKAKTALAKAEAVLAANPEDEAAKNAVQEAKKAVEDADKKVGEGKKEYDKA 270
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+V + + + + +++ +
Sbjct: 271 KGVFQSVLRGMTLADFTGLKGL--------------------------GELHSDIQRMIL 304
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ + + + A KIG+ + +++Q +F+K + D +E G+G LVDADM +ES +
Sbjct: 305 TSVQNTVRDAVNVTLTAGSKIGAAVNLVNIQLNFVKKLLDNIEVGIGALVDADMNAESAK 364
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ALQ QQQL +QALSI N + IL+LFR
Sbjct: 365 LAALQVQQQLGIQALSIANQGSQNILALFR 394
>gi|254239460|ref|ZP_04932782.1| flagellin, FliC [Pseudomonas aeruginosa 2192]
gi|3386644|gb|AAC28557.1| flagellin [Pseudomonas aeruginosa]
gi|126192838|gb|EAZ56901.1| flagellin, FliC [Pseudomonas aeruginosa 2192]
Length = 387
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 99/290 (34%), Gaps = 3/290 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + + +L R+S+G R++ A D+AA IA + S L+
Sbjct: 3 LTVNTNIASLNTQRNLNNSSASLNTSLQRLSTGSRINSAKDDAAGLQIANRLTSQVNGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S A+ + ++ +++ +++ ++ ++ E+ QLQ +
Sbjct: 63 VATKNANDGISLAQTAEGALQQSTNILQRMRDLSLQSANGSNSDSERTALNGEVKQLQKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I+ ++F G L G ++ + + + + Y +
Sbjct: 123 LDRISNTTTFGGRKLLDGSFGVASFQVGSAANEIISVGIDEMSAESLNGTYFKADGGGAV 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ + + + + + A
Sbjct: 183 TAATASGTVDIAIGITGGSAVNVKVDMKGNETAEQAAAKIAAAVNDANVGIGAFTDGAQI 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
+K A + A +T S +G+ + + + + DI
Sbjct: 243 SYVSKASADGTTSAVSGVAITDTGSTGAGTAAGTTTFTEANDTVAKIDIS 292
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 46/403 (11%), Positives = 103/403 (25%), Gaps = 16/403 (3%)
Query: 49 IAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI 108
+A + ++ +L+ + S+ ++ + +S + D +
Sbjct: 1 MALTVNTNIASLNT-QRNLNNSSASLNTSLQRLSTGSRI------------NSAKDDAAG 47
Query: 109 QSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
+L SQ+ + + + + +++
Sbjct: 48 LQIANRLTSQVNGLNVATKNANDGISLAQTAEGALQQSTNILQRMRDLSLQSANG---SN 104
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
T L + + + V+ + +
Sbjct: 105 SDSERTALNGEVKQLQKELDRISNTTTFGGRKLLDGSFGVASFQVGSAANEIISVGIDEM 164
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
A G T A T G++ + + + T +
Sbjct: 165 SAESLNGTYFKADGGGAVTAATASGTVDIAIGITGGSAVNVKVDMKGNETAEQAAAKIAA 224
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR 348
I + + + S + + +
Sbjct: 225 AVNDANVGIGAFTDGAQISYVSKASADGTTSAVSGVAITDTGSTGAGTAAGTTTFTEAND 284
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
+ + V ID IK A +G++ +R + +K + + V G
Sbjct: 285 TVAKIDISTAKGAQSAVLVIDEAIKQIDAQRADLGAVQNRFDNTINNLKNIGENVSAARG 344
Query: 409 RLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D D A+E+ L+ Q QQ L+ N +LSL R
Sbjct: 345 RIEDTDFAAETANLTKNQVLQQAGTAILAQANQLPQSVLSLLR 387
>gi|188494683|ref|ZP_03001953.1| flagellin FliC [Escherichia coli 53638]
gi|30059894|gb|AAP13319.1| FliC [Escherichia coli]
gi|188489882|gb|EDU64985.1| flagellin FliC [Escherichia coli 53638]
Length = 570
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 71/220 (32%), Gaps = 3/220 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSTSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + + +D+
Sbjct: 124 DRVSGQTQFNGVNVLSKDGSMKIQVGANDGETITIDLKKIDSSTLKLTSFNVNGKGAVDN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
+ + V + T +
Sbjct: 184 AKATEADLTAAGFSQGAVVSGNSTWTKSTVTTFNAATATD 223
Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 39/319 (12%), Positives = 87/319 (27%)
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
+ S + S + + + + Y S G+ + + +
Sbjct: 252 YTYNATSKSYSFDATALTNGDGTGATTKVADVLKAYAANGDNTAQISIGGSAQDVKIASD 311
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
+ I A + + + V
Sbjct: 312 GTLTDVNGDALYIGSDGNLTKNQAGGPDAATLDGIFNGANGNAAVDAKITFGSGMTVDFT 371
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
A + T ++ A + + N ++T+ G + G
Sbjct: 372 QASKKVDIKGATVSAEDMDTALTGQAYTVANGAQSFDVAAGGAVTATTGGATVNIGADGE 431
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ T +D + + T+A + + + +D I
Sbjct: 432 LTTATNKTVTETYHEFANGNILDDDGAALYKAADGSLTTEATGKSEVTTDPLKALDDAIA 491
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 492 SVDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGN 551
Query: 434 QALSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 552 SVLAKANQVPQQVLSLLQG 570
>gi|32186918|gb|AAP72264.1| flagellin A [Helicobacter pylori]
Length = 510
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 64/505 (12%), Positives = 139/505 (27%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQANSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N ++ + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKISSSAGTGIGVLAEVINKNSNQTGVKAYASVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR------------------- 281
Q+ ++ + + + S + + + T
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQNGRLNLRSLDG 304
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
G + S + N T +
Sbjct: 305 RGIEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFT 364
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-----ATAAAGKIGS------------ 384
N + + + + + +G+
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGAGVTTLRGAMVVI 424
Query: 385 -----ISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
+ + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|22553062|emb|CAD42899.1| flagellin [Legionella pneumophila serogroup 8]
Length = 327
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 80/204 (39%), Gaps = 3/204 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++++A + L ++ R+SSGLR++ A D+AA +I+Q M + ++
Sbjct: 4 VINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
G S +A+ M + +++ ++ + SIQSEI+QL+S+L
Sbjct: 64 AVRNANDGISLSQVAEGAMQETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA+ + FNG+ L ++ + + + + T + +
Sbjct: 124 ERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFSIGSIKASSIGGIATATGTEVAGA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVL 203
+ I
Sbjct: 184 AATDITIAIGGGAATSINSSANFT 207
>gi|317010824|gb|ADU84571.1| flagellin A [Helicobacter pylori SouthAfrica7]
Length = 510
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 68/505 (13%), Positives = 146/505 (28%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N ++ + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKISSSAGTGIGVLAEVINKNSNQTGVKAYANVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG----------------- 283
Q+ ++ + + + S + + + T
Sbjct: 245 QSGNLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQNGRLNLRSLDG 304
Query: 284 -----------------NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ TK S AK N D++
Sbjct: 305 RGIEIKTDSTNGVPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFT 364
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-ATAAAGKI--- 382
+ ++ + +++ + + T G +
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGAGVTTLRGAMVVI 424
Query: 383 ---GSISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
S + + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|187777159|ref|ZP_02993632.1| hypothetical protein CLOSPO_00704 [Clostridium sporogenes ATCC
15579]
gi|187774087|gb|EDU37889.1| hypothetical protein CLOSPO_00704 [Clostridium sporogenes ATCC
15579]
Length = 289
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM A + + +R++SG+R++ AAD+ A +I++ M++ L
Sbjct: 9 INHNVNAMIAYRNIMINGSLAGKAMERLASGMRINRAADDPAGLAISEKMRAQIRGLEMA 68
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQLR 120
S G S + +A+ G+S+ ++ ++ + +IQ EI +L +
Sbjct: 69 SRNAQDGISMIQVAEGGVSEIQSMLQRMRELAVQAANGTNSPEDLKNIQDEINELTKGID 128
Query: 121 DIARGSSFNGENWLRTDL 138
DIA+G+ FN L +
Sbjct: 129 DIAKGTEFNTIKVLNANA 146
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 44/124 (35%)
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+ K + + + + + + + D I ++ +G+ S+
Sbjct: 162 QSFGVKFRNMNSAALGIKGDKDNYGVDVSTPEKASAAIKVFDDAINKTSSFRSSLGASSN 221
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
+ + ++++ + + R+ DADMA E + QQ+A S V +
Sbjct: 222 VLEHRINYLENTIINLTEAESRIRDADMAKEMMNYTKYSILQQVAQAIFSQVLKQQESTI 281
Query: 448 SLFR 451
L +
Sbjct: 282 QLLK 285
>gi|170761749|ref|YP_001788046.1| flagellin [Clostridium botulinum A3 str. Loch Maree]
gi|169408738|gb|ACA57149.1| flagellin [Clostridium botulinum A3 str. Loch Maree]
Length = 279
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 65/137 (47%), Gaps = 3/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRQMGINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D ++ E+ +LQ ++
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVGVDKNNLDKEVKELQKEIN 122
Query: 121 DIARGSSFNGENWLRTD 137
I+ + FN +N L D
Sbjct: 123 RISSQTQFNTKNLLNGD 139
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 36/89 (40%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+M+ ID I + K+G+ +R+ + + ++ R+ D DMA E
Sbjct: 191 KMIETIDKAINTVSGERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNF 250
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q A L+ N + +L L R
Sbjct: 251 TKTNILTQAAQAMLAQANQAPQGVLQLLR 279
>gi|145306512|gb|ABP57032.1| flagellin [Leptospira interrogans serovar Canicola]
Length = 283
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 65/158 (41%), Gaps = 3/158 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + L+ ++ +SSG+R++ AAD+A+ ++++ +++ L
Sbjct: 3 INHNLSAVNAHRSLKFNELAVDKTMKALSSGMRINSAADDASGLAVSEKLRTQVNGLRQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + A+ + + +++ I+ D + +Q E++ L ++
Sbjct: 63 ERNTEDGMSFIQTAEGFLEQTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN 158
IA + FN + + ++
Sbjct: 123 RIASQAEFNKFKLFEGQFARGSRVASMWFHMGPNQNQR 160
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 34/97 (35%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ D + +G+ +R+ + + ++ R+ DA
Sbjct: 185 ISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDAH 244
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+A E L+ Q Q L+ N +L L +
Sbjct: 245 LAEEVVSLTTKQILVQSGTAMLAQANMKPNSVLKLLQ 281
>gi|169950604|gb|ACB05831.1| flagellin [Clostridium botulinum]
Length = 273
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 73/194 (37%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++ E+ +LQ ++
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELAVQAANDTNVSVDKENLDKEVKELQKEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L + T I + + +S
Sbjct: 123 RISSQTQFNTKGLLDGKAENMTFQIGANSGQTIKLTIATMNTSKLGVGATTITLNSGAAS 182
Query: 181 TDGTERYGLLDRNH 194
G N
Sbjct: 183 ITGMISTIDKAINT 196
Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 39/96 (40%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ ++ M+S ID I +A K+G+ +R+ + + ++ R+ D DM
Sbjct: 178 SGAASITGMISTIDKAINTVSAERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDM 237
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A E + Q A L+ N + + L R
Sbjct: 238 AKEMMNFTKTNILTQAAQAMLAQANQAPQGVFQLLR 273
>gi|297379802|gb|ADI34689.1| Flagellin A [Helicobacter pylori v225d]
Length = 510
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 64/505 (12%), Positives = 139/505 (27%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N ++ + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKISSSAGTGIGVLAEVINKNSNQTGVRAHASVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR------------------- 281
Q+ ++ + + + S + + + T
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQNGRLNLRSLDG 304
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
G + S + N T +
Sbjct: 305 RGIEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFS 364
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-----ATAAAGKIGS------------ 384
N + + + + + +G+
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQNLGAGVTTLRGAMVVI 424
Query: 385 -----ISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
+ + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|322807040|emb|CBZ04614.1| flagellin protein FlaA [Clostridium botulinum H04402 065]
Length = 273
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 79/194 (40%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRQMAINTGNNGKSIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + + +++ ++ ++ D ++Q E+ +LQS++
Sbjct: 63 SRNSQDAISLIQTGEGALNETHSILQRMRELAVQSANDTNVTVDRANLQKEVAELQSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L S I + + T ++ + + +S
Sbjct: 123 RIASQTQFNTKNLLNGSAKSMMFQIGANKDQAIKLTIGAMDTSTLKVASINIGSGVTAAS 182
Query: 181 TDGTERYGLLDRNH 194
G + N
Sbjct: 183 ISGMIKTIDDAINT 196
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 38/95 (40%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ M+ ID I +A K+G+ +R+ + + ++ R+ D DMA
Sbjct: 179 TAASISGMIKTIDDAINTVSAERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMA 238
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + Q A L+ N + +L L R
Sbjct: 239 KEMMNFTKTNILTQAAQAMLAQANQAPQGVLQLLR 273
>gi|149188074|ref|ZP_01866369.1| flagellin [Vibrio shilonii AK1]
gi|148838062|gb|EDL55004.1| flagellin [Vibrio shilonii AK1]
Length = 381
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 75/227 (33%), Gaps = 3/227 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + L +R+SSG +++ A D+AA I+ + + + L
Sbjct: 4 TVNTNVSAMTAQRYLNKSSDALNTSMERLSSGHKINSARDDAAGLQISNRLTAQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M+++ ++ +++ + +I E LQ++L
Sbjct: 64 AMRNANDGISIAQTAEGAMNESTSILQRMRDLAIQSANGTNSPAERVAINEESNALQAEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G ++ I + + I
Sbjct: 124 NRIAETTSFGGRRLLNGSFGEASFQIGANSGEALIMGLTSIRADDFRMGGTTYTANNGKG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + + + + +
Sbjct: 184 ADWRVDNTNNQLDISFTTKSGEAVAINITAKQGDDIEQLATYINGQS 230
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 45/376 (11%), Positives = 104/376 (27%), Gaps = 7/376 (1%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
A+ ++K+ D ++T ++++G + + + S
Sbjct: 13 TAQRYLNKSSDALNTSMERLSSGHKINSARDDAAGLQIS-----NRLTAQSRGLDVAMRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A A+ + + + + +
Sbjct: 68 ANDGISIAQTAEGAMNESTSILQRMRDLAIQSANGTNSPAERVAINEESNALQAELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ ++ S +AS I + ++A + A
Sbjct: 128 ETTSFGGRRLLNGSFGEASFQIGANSGEALIMGLTSIRADDFRMGGTTYTANNGKGADWR 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
N S + A + DI AT N + + ++
Sbjct: 188 VDNTNNQLDISFTTKSGEAVAINITAKQGDDIEQLATYINGQSDKISASVGDNGELQVFV 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
D + + + T + +S ID+ +K
Sbjct: 248 AEPDIDLNQSVTIGGSLATDLDLQTASAAQSTVQDIDM--TSVAGSQNAISIIDSALKYV 305
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ +G+ +R+ + + +++ V+ R+ D D A E+T ++ Q QQ
Sbjct: 306 DSQRADLGAKQNRLSHSINNLANVQENVDASNSRIKDTDFAKETTEMTKNQILQQAGTSI 365
Query: 436 LSIVNNSTARILSLFR 451
L+ +SL +
Sbjct: 366 LAQAKQLPNSAMSLLQ 381
>gi|138896704|ref|YP_001127157.1| flagellin [Geobacillus thermodenitrificans NG80-2]
gi|134268217|gb|ABO68412.1| Flagellin [Geobacillus thermodenitrificans NG80-2]
Length = 275
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 41/255 (16%), Positives = 81/255 (31%), Gaps = 3/255 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++A + L ++ +R+SSGLR++ AAD+AA +I++ M+S L
Sbjct: 3 INHNIQALNAYRNLAANQSSISKNLERLSSGLRINRAADDAAGLAISEKMRSQIRGLQMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ +++ SE QL ++
Sbjct: 63 ERNALDAISLIQTAEGALNEVHSILQRMRELAVQAANGTNQDTDREALDSEFQQLIEEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + + FN N L + S A + D +
Sbjct: 123 RIGKETQFNKMNILAANQSISIQLGANDGQTLTMSWKQQLKTSLGEDEIGISSLDITTVD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T L + + + + ++T L + A
Sbjct: 183 NAQTAISTLDEAIISVSKSRSKMGAYQNRLEHTINNLTTANENLTSAESRIRDTDMAMEM 242
Query: 241 QAKGIATIPVPLPAA 255
I A
Sbjct: 243 AEFTKNNILTQAAQA 257
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 42/146 (28%)
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + + L ++ + +
Sbjct: 129 QFNKMNILAANQSISIQLGANDGQTLTMSWKQQLKTSLGEDEIGISSLDITTVDNAQTAI 188
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
S +D I + + K+G+ +R+ + + + + R+ D DMA E +
Sbjct: 189 STLDEAIISVSKSRSKMGAYQNRLEHTINNLTTANENLTSAESRIRDTDMAMEMAEFTKN 248
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q A L+ N IL L +
Sbjct: 249 NILTQAAQAMLAQSNQLPQGILQLLK 274
>gi|308061934|gb|ADO03822.1| flagellin A [Helicobacter pylori Cuz20]
Length = 510
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 68/505 (13%), Positives = 146/505 (28%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N ++ + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKISSSAGTGIGVLAEVINKNSNQTGVRAHASVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG----------------- 283
Q+ ++ + + + S + + + T
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQNGRLNLRSLDG 304
Query: 284 -----------------NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ TK S AK N D++
Sbjct: 305 RGIEIKTDSVSDGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFS 364
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-ATAAAGKI--- 382
+ ++ + +++ + + T G +
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVLASGNQSLGAGVTTLRGAMVVI 424
Query: 383 ---GSISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
S + + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|90411014|ref|ZP_01219028.1| flagellin [Photobacterium profundum 3TCK]
gi|90328227|gb|EAS44538.1| flagellin [Photobacterium profundum 3TCK]
Length = 382
Score = 124 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 40/237 (16%), Positives = 82/237 (34%), Gaps = 3/237 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L +R+S+G +++ A D+AA I+ + + + L
Sbjct: 4 TVNTNVSAMTAQRYLGQATEATGKSMERLSTGSQINSAKDDAAGLQISNRLMTQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M + ++ +++ D +IQ E+T L+ ++
Sbjct: 64 AVRNANDGISMAQTAEGSMQETTSILQRMRDLSLQSSNGSNSTDDRVAIQEEVTALKDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + + + N + S
Sbjct: 124 NRIAETTSFGGTKLLNGTFGARSFQVGADSGEAVQLSFNDIRADAMNSTSTKGTAGVDSS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+ + V+ + DI+ +G + ++T
Sbjct: 184 WEVSDAMATEDLKINGTAVQIKAGDDIEELATKINGAVGNVNASVSTIQVDDGAGNM 240
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/368 (10%), Positives = 91/368 (24%), Gaps = 7/368 (1%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQL------RDIARGSSFNGENWLRTDLGSST 142
+ T + + S S+I + + S + G S
Sbjct: 15 QRYLGQATEATGKSMERLSTGSQINSAKDDAAGLQISNRLMTQSRGLDVAVRNANDGISM 74
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A A+ + ++ T + +
Sbjct: 75 AQTAEGSMQETTSILQRMRDLSLQSSNGSNSTDDRVAIQEEVTALKDEINRIAETTSFGG 134
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
K ++ + S + + S ++A KG A + + A
Sbjct: 135 TKLLNGTFGARSFQVGADSGEAVQLSFNDIRADAMNSTSTKGTAGVDSSWEVSDAMATED 194
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ + A + S+++ + V
Sbjct: 195 L-KINGTAVQIKAGDDIEELATKINGAVGNVNASVSTIQVDDGAGNMVDKLALQVVADSD 253
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKI 382
+ ++ V+ +D +K + +
Sbjct: 254 QEIKFEGAATVAALGMADAAAGTGGASVQKIDVTSVGGSQQAVAVLDNALKQIDSDRANL 313
Query: 383 GSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNS 442
G+ +R++ + + + + V R+ D D A E+T ++ Q Q + L+ +
Sbjct: 314 GASQNRLNHTINNLNNVNENVSASNSRIRDTDFAKETTEMTKNQILSQASTSILAQAKQA 373
Query: 443 TARILSLF 450
LSL
Sbjct: 374 PQAALSLL 381
>gi|19910969|dbj|BAB87735.1| flagellin protein FliB(A) [Clostridium novyi]
Length = 263
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 3/153 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRMMGQNITGAGKAMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D ++Q E+TQLQS+L
Sbjct: 63 SRNAQDGISLIQTAEGALNETHAILQRMRELAVQTSNDTNTTADRINVQKEVTQLQSELT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
I+ + FN + L T + + +
Sbjct: 123 RISTDTEFNTKKLLNGSAKGVTFQVGANQGQTI 155
Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 18/149 (12%), Positives = 43/149 (28%), Gaps = 2/149 (1%)
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
+ R + +T + S + + + +
Sbjct: 99 NDTNTTADRINVQKEVTQLQSELTRISTDTEFNTKKLLNGSAKGVTFQVGANQGQTIAVD 158
Query: 342 VTLNITR--HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
++ N + + +E ++ I+ I + +GSI +R+ +
Sbjct: 159 ISEMSASALKVNDVSLSSGAKSQEAITKINDAINTVSGERATLGSIQNRLEHTINSDNNA 218
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQ 428
+ ++ R+ D DMA E S
Sbjct: 219 AENLQAAESRVRDVDMAKEMMEFSKKNIL 247
>gi|237796165|ref|YP_002863717.1| flagellin [Clostridium botulinum Ba4 str. 657]
gi|229260653|gb|ACQ51686.1| flagellin [Clostridium botulinum Ba4 str. 657]
Length = 273
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 73/194 (37%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++ E+ +LQ ++
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELAVQAANDTNVSVDKENLDKEVKELQKEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L + T I + + +S
Sbjct: 123 RISSQTQFNTKGLLDGKAENMTFQIGANSGQTIKLTIATMNTSKLGVGATTITLNSGAAS 182
Query: 181 TDGTERYGLLDRNH 194
G N
Sbjct: 183 ITGMISTIDKAINT 196
Score = 86.3 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ ++ M+S ID I +A K+G+ +R+ + + ++ R+ D DM
Sbjct: 178 SGAASITGMISTIDKAINTVSAERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDM 237
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A E + Q A L+ N + +L L R
Sbjct: 238 AKEMMNFTKTNILTQAAQAMLAQANQAPQGVLQLLR 273
>gi|114054790|gb|ABI49996.1| FlaA [Clostridium botulinum]
Length = 273
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
N +AM+A + + N +++SSGLR++ A D+AA SI++ M++ L+ S
Sbjct: 1 NHNLNAMNAHRNMGINTGNSAKAMEKLSSGLRINRAGDDAAGLSISEKMRAQIRGLNQAS 60
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
G S + A+ +++ ++ ++ D +IQ E+T L S++
Sbjct: 61 RNAQDGISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRTAIQEELTSLTSEIDR 120
Query: 122 IARGSSFNGENWLRTD 137
IA + FN + L D
Sbjct: 121 IASTTQFNEKKLLNGD 136
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 39/97 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + I++ IK + K+G+ +R+ + + ++ R+ D D
Sbjct: 177 VADNGTAKASIDSINSAIKSVSTERSKLGAFQNRLEHTIANLDNASENLQAAESRVRDVD 236
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E S QQ A L+ N + +L L R
Sbjct: 237 MAKEMMNFSKNNILQQAAQAMLAQANQAPQGVLQLLR 273
>gi|239905665|ref|YP_002952404.1| flagellin [Desulfovibrio magneticus RS-1]
gi|239795529|dbj|BAH74518.1| flagellin [Desulfovibrio magneticus RS-1]
Length = 606
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 48/362 (13%), Positives = 95/362 (26%), Gaps = 4/362 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N AM++++ L D L R+SSGLR++ AAD+AA ++ ++M+SD L+
Sbjct: 3 LVINHNLMAMNSARNLSDHYGALSTSTQRLSSGLRINSAADDAAGLAVRELMRSDVATLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K I SE + S+
Sbjct: 63 QGVRNANDAISLIQTADGALQIIDEKLIRMKELAEQAATGTYSSDQRIIIDSEFQAMMSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
++ IA + FN L + + + + S + D
Sbjct: 123 IQRIAISTDFNSIKLLDG-SSNPIIELGEQINQSGFGISPLTNSASYGIVEAGGTLYCSD 181
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
S+ + G P +K I + I T T
Sbjct: 182 STNSIYKYDGNKSWTAVSSGLPAGIKLISKYDDNLVCGILTGSGVGVYQYQNSTWTQINT 241
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ ++ ++ + +
Sbjct: 242 NGFGNPNNFGMDSMIEKDGDLYVSTNNPTDGVNIYKYNSGTSWTKINTDGFGDLNNTNAN 301
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ N V + + + +G S + +
Sbjct: 302 LGTSNGKLYASTWNNNGTIVYEYESGTSWKPISQQGFGNGTSALQFTNLDGELYGGASSN 361
Query: 359 LA 360
Sbjct: 362 DG 363
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/321 (12%), Positives = 78/321 (24%)
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
G + A + + TI Y + T S G
Sbjct: 286 KINTDGFGDLNNTNANLGTSNGKLYASTWNNNGTIVYEYESGTSWKPISQQGFGNGTSAL 345
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
+ + E + T ++ + + + +
Sbjct: 346 QFTNLDGELYGGASSNDGAVIYKYTEGGNWEQINSNGFGDGVTGASRIVNFQNELYVGTG 405
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ T + + + S A TS V
Sbjct: 406 GLSPGDIGGVYKYTGNKQWEKINDNGIGNTNNRSITLYSAGKNLYATSYNPTDGVEVFNY 465
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
T +RKD+ + + + + + ID
Sbjct: 466 LEAEDNKLTVQFGTQNRKDIDSYDIPATNSTINTNGLNIQDLNIRTQNGAQYSLERIDNA 525
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I +G+ +R+ I++ + ++ ++ D D+A E T Q Q
Sbjct: 526 IVKKDKIRANLGATQNRLENTVSNIQIQAENLQAAESQISDTDVAEEMTNFVKEQILSQA 585
Query: 432 AVQALSIVNNSTARILSLFRG 452
AV LS N+ L L G
Sbjct: 586 AVAMLSQANSLPKMALQLIEG 606
>gi|108563007|ref|YP_627323.1| flagellin A [Helicobacter pylori HPAG1]
gi|107836780|gb|ABF84649.1| flagellin A [Helicobacter pylori HPAG1]
Length = 510
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 69/505 (13%), Positives = 145/505 (28%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A + S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLHSQASSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N +V + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG----------------- 283
Q+ ++ + + + S + + + T
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLRSIDG 304
Query: 284 -----------------NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ TK S AK N D++
Sbjct: 305 RGIEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFT 364
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC-ATAAAGKI--- 382
+ ++ + +++ + + T G +
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGSGVTTLRGAMVVI 424
Query: 383 ---GSISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
S + + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|30721726|gb|AAP34194.1| FliC [Pseudomonas aeruginosa]
Length = 195
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 46/138 (33%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T S + + + + V ID IK
Sbjct: 58 TSAVSGVVIADTGSTGVGTAAGVAPSATAFAKTNDTVAKIDISTAKGAQSAVLVIDEAIK 117
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + +K + + V GR+ D D A+E+ L+ Q QQ
Sbjct: 118 QIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDFAAETANLTKNQVLQQAGT 177
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 178 AILAQANQLPQSVLSLLR 195
>gi|6009849|dbj|BAA85089.1| flagellin [Escherichia coli]
Length = 565
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 68/209 (32%), Gaps = 3/209 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDV 208
N V +
Sbjct: 184 KAATISDLAATGANVTNSSNIVVTTKFNA 212
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 84/264 (31%)
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
+ S++ A+ + + + A + +
Sbjct: 302 WVGGALTTNDPTGSTPATMSSLFKAADDKDAAQSSIDFGGKKYEFAGGNSTNGGGVKFKD 361
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
V A A S + K ++ + + A + + G +T
Sbjct: 362 TVSSDALLAQVKADSTANNVKITFNNGPLSFTASFQNGVSGSAASNAAYIDSEGELTTTE 421
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ N DT + ++ K + + + T+ + A ++ ++ +
Sbjct: 422 SYNTNYSVDKDTGAVSVTGGSGTGKYAANVGAQAYVGADGKLTTNTTSTGSATKDPLNAL 481
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D I +G+I +R+ + + + R+ DAD A+E + +S Q
Sbjct: 482 DEAIASIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQII 541
Query: 429 QQLAVQALSIVNNSTARILSLFRG 452
QQ L+ N ++LSL +G
Sbjct: 542 QQAGNSVLAKANQVPQQVLSLLQG 565
>gi|169950602|gb|ACB05830.1| flagellin [Clostridium botulinum]
Length = 272
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 72/194 (37%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 2 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ D +++ E+ +LQ ++
Sbjct: 62 PRNSQDAISLIQTAEGALNETHSILQRMRELAVQAANDTNVSVDKENLDKEVKELQKEIN 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L + T I + + +S
Sbjct: 122 RISSQTQFNTKGLLDGKAENMTFQIGANSGQTIKLTIATMNTSKLGVGATTITLNSGAAS 181
Query: 181 TDGTERYGLLDRNH 194
G N
Sbjct: 182 ITGMISTIDKAINT 195
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ ++ M+S ID I +A K+G+ +R+ + + ++ R+ D DM
Sbjct: 177 SGAASITGMISTIDKAINTVSAERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDM 236
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A E + Q A L+ N + +L L R
Sbjct: 237 AKEMMNFTKTNILTQAAQAMLAQANQAPQGVLQLLR 272
>gi|187778695|ref|ZP_02995168.1| hypothetical protein CLOSPO_02290 [Clostridium sporogenes ATCC
15579]
gi|187772320|gb|EDU36122.1| hypothetical protein CLOSPO_02290 [Clostridium sporogenes ATCC
15579]
Length = 276
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + N +++SSGLR++ A D+AA SI++ M++ L+
Sbjct: 3 INHNLNAMNAHRNMGINIGNSAKSMEKLSSGLRINRAGDDAAGLSISEKMRAQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D +I+ E+ L++++
Sbjct: 63 SRNSQDGISLIQTAEGALNETHSILQRMRELGVQAANDTNVTVDRSAIKDELDSLKTEID 122
Query: 121 DIARGSSFNGENWLRTD 137
IA+ + FN +N L
Sbjct: 123 RIAKTTQFNEKNLLNGS 139
Score = 85.6 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 43/111 (38%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
+++ N+ A + + ++ IK + K+G+ +R+ +
Sbjct: 166 SAMDSVSLSINSLAVTNHTSARTTIDSVNKAIKTVSTQRSKLGAFQNRLEHTISNLDNAS 225
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA E S QQ A L+ N + +L L R
Sbjct: 226 ENLQAAESRVRDVDMAKEMMSFSKNNILQQAAQAMLAQANQAPQGVLQLLR 276
>gi|324017935|gb|EGB87154.1| flagellin [Escherichia coli MS 117-3]
Length = 579
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 51/352 (14%), Positives = 100/352 (28%), Gaps = 3/352 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLSGFNVNGGGAVAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + VS + T + LA + AN
Sbjct: 184 TAATKSDLAAAQLLAPGTADANGTVTYTVSAGLKTSTAADVIASLANNAKVNATIANGFG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
T + +GT+ S S + + ++
Sbjct: 244 SPTATDYTYNSATGDFTYSATIAAGTNSGDSNSAQLQSFLTPKAGDTANLNVKIGSTSID 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
++ + + ++D + + K + T
Sbjct: 304 VVLASDGKITAKDGSELFIDVDGNLTKNNAGTVKAATLDALTKNWHTTGTPG 355
Score = 99.8 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 32/235 (13%), Positives = 66/235 (28%)
Query: 218 STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASA 277
+ T A N +S + +
Sbjct: 345 TKNWHTTGTPGAVSTVITTEDETTFTLAGGTDATTSGAITVANARMSAESLQSATKSTGF 404
Query: 278 TYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
T + + + T++TT + +
Sbjct: 405 TVDVGATGNSAGDIKVDSKGIVQQYTGTVFEDAYTKADGSLTTDNTTNLFLQKDGTVTNG 464
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
V ++ + TDA + + + +D I +G++ +R+ +
Sbjct: 465 SGKAVYVSADGNFTTDAETKAATTADPLKALDEAISSIDKFRSSLGAVQNRLDSAVTNLN 524
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 525 NTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 579
>gi|302871575|ref|YP_003840211.1| flagellin domain protein [Caldicellulosiruptor obsidiansis OB47]
gi|302574434|gb|ADL42225.1| flagellin domain protein [Caldicellulosiruptor obsidiansis OB47]
Length = 274
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 40/255 (15%), Positives = 83/255 (32%), Gaps = 3/255 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N AM+ +++ N L +++SSGLR++ A D+AA SI++ M++ L
Sbjct: 3 INNNIMAMNTYRQMGVNNSQLAKSVEKLSSGLRINRAGDDAAGLSISEKMRAQIRGLQQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D ++ E QL S++
Sbjct: 63 SRNAQDGISLIQTAEGALNEVHSILQRMRELAVQAANDTNVTVDRGALNDEFKQLISEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN ++ L+++ ++ A + D +
Sbjct: 123 RIANNTQFNEKDILKSNFTANIQVGANKSQVITLSWKAHTATALGEDAVDISTQTISTYG 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + + + + + + L A
Sbjct: 183 NAQTAIETINKAIVSVSKSRSKMGALQNRLEHTIANLDNAAENLQAAESRIRDVDMAKEM 242
Query: 241 QAKGIATIPVPLPAA 255
I A
Sbjct: 243 MNFTKLNILNQAATA 257
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 46/137 (33%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + + + + + +T + + + I+ I
Sbjct: 138 SNFTANIQVGANKSQVITLSWKAHTATALGEDAVDISTQTISTYGNAQTAIETINKAIVS 197
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ + K+G++ +R+ + + ++ R+ D DMA E + L Q A
Sbjct: 198 VSKSRSKMGALQNRLEHTIANLDNAAENLQAAESRIRDVDMAKEMMNFTKLNILNQAATA 257
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +L L R
Sbjct: 258 MLAQANQLPQAVLQLLR 274
>gi|168183206|ref|ZP_02617870.1| flagellin protein [Clostridium botulinum Bf]
gi|182673706|gb|EDT85667.1| flagellin protein [Clostridium botulinum Bf]
Length = 273
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 72/194 (37%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++ E+ +LQ ++
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELAVQAANDTNVSVDKENLDKEVKELQKEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN + L + T I + + +S
Sbjct: 123 RILSQTQFNTKGLLDGKAENMTFQIGANSGQTIKLTIATMNTSKLGVGATTITLNSGAAS 182
Query: 181 TDGTERYGLLDRNH 194
G N
Sbjct: 183 ITGMISTIDKAINT 196
Score = 87.1 bits (213), Expect = 6e-15, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ ++ M+S ID I +A K+G+ +R+ + + ++ R+ D DM
Sbjct: 178 SGAASITGMISTIDKAINTVSAERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDM 237
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A E + Q A L+ N + +L L R
Sbjct: 238 AKEMMNFTKTNILTQAAQAMLAQANQAPQGVLQLLR 273
>gi|119898824|ref|YP_934037.1| putative flagellin [Azoarcus sp. BH72]
gi|119671237|emb|CAL95150.1| putative flagellin [Azoarcus sp. BH72]
Length = 560
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 49/370 (13%), Positives = 106/370 (28%), Gaps = 8/370 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN + + + ++L + L R+SSGLR++ A D+AA +I++ M + L+
Sbjct: 3 IQTNTATLFSQRQLTQSSQGLATSLQRLSSGLRINSAKDDAAGLAISERMTAQIKGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+ M D + ++ +D ++Q E+ QL +
Sbjct: 63 RRNANDSISLLMTAEGAMGSVSDALQRVRELAVQAANATNSASDKAALQQEVNQLLQGVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FNG+ ++ + + T +
Sbjct: 123 RIGTHTQFNGQKL---FSQGRSSIGGDPDKRAVLDSLQDWAGAATERIRDFYGLQGDGAD 179
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ V + ++ G+ +
Sbjct: 180 MEVNLYEDAAGGVLASVSYVGVDGQGRSLNLTLNIDMADFVPANPPNGGSAPMYNDRIIT 239
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A + + A G + + A + G + + +D
Sbjct: 240 HEMVHAVMGRTMNFASLPSWFKEGAAEYIHGADERVAGDLLGGGTYAANLTAVSGAFAAD 299
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + ++D L ++ + + +AN K A
Sbjct: 300 DVSGSPGYSAGYLAMRFMDRGMGVKAVMARLAAGDTLDQAINSASGGTYAN--EAAFKAA 357
Query: 361 MEEMVSFIDT 370
+ + IDT
Sbjct: 358 VNSAFASIDT 367
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 32/328 (9%), Positives = 77/328 (23%)
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ +G + + + + L + T
Sbjct: 232 MYNDRIITHEMVHAVMGRTMNFASLPSWFKEGAAEYIHGADERVAGDLLGGGTYAANLTA 291
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + D + L + + + T A A+ T+
Sbjct: 292 VSGAFAADDVSGSPGYSAGYLAMRFMDRGMGVKAVMARLAAGDTLDQAINSASGGTYANE 351
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
A+ + S T+ KS + + S
Sbjct: 352 AAFKAAVNSAFASIDTTSQASVTASLKSAFGVDLSNSDTGAIGGADANGGNTYTAASIVA 411
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
+ S + K + +M+ + + +
Sbjct: 412 DSGSFFGFNLKMPEIGGGAGQNEFIFQVGAKGGEDITAMIGAMNIGALGLAGTDLTTSPQ 471
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ +D + ++G++ SR+ ++ + R+ D D A+E+ L
Sbjct: 472 SAIRAVDRALDYVNRQRARVGALQSRMESTISRLENAAENASASRSRIRDTDFAAETANL 531
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLF 450
+ Q + + N L L
Sbjct: 532 TRQTILQNAGIAMTTQANAIPQLALQLL 559
>gi|333004181|gb|EGK23713.1| flagellin [Shigella flexneri K-272]
gi|333017793|gb|EGK37100.1| flagellin [Shigella flexneri K-227]
Length = 550
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 51/377 (13%), Positives = 103/377 (27%), Gaps = 5/377 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGGGAVAN 183
Query: 180 STDGTERYGLLDRN--HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + S A + + +A
Sbjct: 184 TAASKADLVAANATVVGNKYTVSAGYDAAKASDLLAGVSDGDTVQATISNGFGTAASATN 243
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ + A+ A + + T ++
Sbjct: 244 YKYDSASKSYSFDTTTASAADVQKYLTPGVGDTAKGTITIDGSAQDVQISSDGKITASNG 303
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
T + K G+ + +TL + ID G + ++
Sbjct: 304 DKLYIDTTGRLTKNGSGASLTEASLSTLAANNTKATTIDIGGTSISFTGNSTTPDTITYS 363
Query: 358 KLAMEEMVSFIDTQIKC 374
+ + D +
Sbjct: 364 VTGAKVDQAAFDKAVST 380
Score = 99.8 bits (246), Expect = 9e-19, Method: Composition-based stats.
Identities = 47/358 (13%), Positives = 94/358 (26%)
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
G S L +++A+ K S
Sbjct: 193 AANATVVGNKYTVSAGYDAAKASDLLAGVSDGDTVQATISNGFGTAASATNYKYDSASKS 252
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
+ V + T D + + +
Sbjct: 253 YSFDTTTASAADVQKYLTPGVGDTAKGTITIDGSAQDVQISSDGKITASNGDKLYIDTTG 312
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
T + AAN T I + P+T + + A
Sbjct: 313 RLTKNGSGASLTEASLSTLAANNTKATTIDIGGTSISFTGNSTTPDTITYSVTGAKVDQA 372
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
A + +++ + + T + + + + T T +D
Sbjct: 373 AFDKAVSTSGNNVDFTTAGYSVNGTTGAVTKGVDSVYVDNNEALTTSDTVDFYLQDDGSV 432
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ V + TDA + + + +D I +G++ +R+
Sbjct: 433 TNGSGKAVYKDADGKLTTDAETKAATTADPLKALDEAISSIDKFRSSLGAVQNRLDSAVT 492
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 493 NLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 550
>gi|307546943|ref|YP_003899422.1| flagellin [Halomonas elongata DSM 2581]
gi|307218967|emb|CBV44237.1| K02406 flagellin [Halomonas elongata DSM 2581]
Length = 297
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 79/208 (37%), Gaps = 3/208 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I TN +A+ L +L+ Q+R+SSGLR++ AAD+AA +IA M S L
Sbjct: 1 MSVINTNITALIGQNNLSSAQNSLQQAQERLSSGLRINSAADDAAGQAIANRMTSTVTGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQS 117
+ + G S A+ + + D + I+ D SIQ E+ + S
Sbjct: 61 NQAARNANDGISLAQTAEGALDQVNDNLQRIRELTVQAQNDTNTAQDIDSIQEEVNERLS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + FNG G+S + + G I +
Sbjct: 121 EIDRVTSQTEFNGRGLFGDGAGTSFSIQVGAKDGETISISIADSAGDGTSTTSGGWNMHT 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ D + + + + VL+
Sbjct: 181 STGVDVSAQTVGGEARSESTFGFDVLET 208
Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 29/259 (11%), Positives = 68/259 (26%)
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
+ Q + + S + + + A + D + I + V
Sbjct: 38 NSAADDAAGQAIANRMTSTVTGLNQAARNANDGISLAQTAEGALDQVNDNLQRIRELTVQ 97
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ ++ + + +
Sbjct: 98 AQNDTNTAQDIDSIQEEVNERLSEIDRVTSQTEFNGRGLFGDGAGTSFSIQVGAKDGETI 157
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ + T+ S + + + + ++ +D
Sbjct: 158 SISIADSAGDGTSTTSGGWNMHTSTGVDVSAQTVGGEARSESTFGFDVLETDALAVLDNH 217
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I A +G++ +R D I+ ++ R+ DAD A E + ++ Q +Q
Sbjct: 218 IGNVDEARSNLGAMQNRFETALDNIETTSTNLQSARSRIEDADYAEEVSNMTRAQILEQA 277
Query: 432 AVQALSIVNNSTARILSLF 450
L+ N S +LSL
Sbjct: 278 GTSILAQANQSPQSVLSLL 296
>gi|156193234|gb|ABU56002.1| flagellin B [Leptospira interrogans serovar Lai]
Length = 283
Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats.
Identities = 32/255 (12%), Positives = 80/255 (31%), Gaps = 3/255 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + L+ ++ +SSG+R++ AAD+A+ ++++ +++ L
Sbjct: 3 INHNLSAVNAHRSLKFNELAVDKTMKALSSGMRINSAADDASGLAVSEKLRTQVNGLRQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + A+ + + +++ I+ D + +Q E++ L ++
Sbjct: 63 ERNTEDGMSFIQTAEGFLEQTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + + ++ + I T+
Sbjct: 123 RIASQAEFNKFKLFEGQFARGSRVASMWFHMGPNQNQRERFYIGTMTSKALKLVKADGRP 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ D + + + L + + D
Sbjct: 183 IAISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRD 242
Query: 241 QAKGIATIPVPLPAA 255
+ +
Sbjct: 243 ADMAEEVVSLTTKQI 257
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ D + +G+ +R+ + + ++ R+ DAD
Sbjct: 185 ISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDAD 244
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E L+ Q Q L+ N +L L +
Sbjct: 245 MAEEVVSLTTKQILVQSGTAMLAQANMKPNSVLKLLQ 281
>gi|14278871|dbj|BAB58972.1| flagellin [Bacillus subtilis]
Length = 333
Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 83/211 (39%), Gaps = 3/211 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ S++L + + +++SSGLR++ A D+AA +I++ M+S L
Sbjct: 3 INHNIAALNTSRQLNAGSNSAAKNMEKLSSGLRINRAGDDAAGLAISEKMRSQIRGLDMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + ++ +++ ++ + T +D +Q E+ QL S++
Sbjct: 63 SKNAQDGISLIQTSEGALNETHSILQRMSELATQAANDTNTDSDRSELQKEMDQLASEVT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L + T I + + N + + ++
Sbjct: 123 RISTDTEFNTKKLLDGTAQNLTFQIGANEGQTMSLSINKMDSESLKVGTTYTVSNDQNTL 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
T + + + +V K
Sbjct: 183 TSTDGKSTATWADEVTDPDGKVTKAAGYYDT 213
Score = 93.3 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 40/130 (30%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
T + + + D + A ++ I T
Sbjct: 192 TWADEVTDPDGKVTKAAGYYDTDGKVIASEKLAADSKVTKGIDISSSAKAASSALTTIKT 251
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
I ++ K+G++ +R+ + + + + R+ D DMASE + Q
Sbjct: 252 AIDTVSSERAKLGAVQNRLEHTINNLGTSSENLTSAESRIRDVDMASEMMEYTKNNILTQ 311
Query: 431 LAVQALSIVN 440
+ L+ N
Sbjct: 312 ASQAMLAQAN 321
>gi|15596284|ref|NP_249778.1| flagellar hook-associated protein FlgL [Pseudomonas aeruginosa
PAO1]
gi|218892949|ref|YP_002441818.1| flagellar hook-associated protein FlgL [Pseudomonas aeruginosa
LESB58]
gi|9947003|gb|AAG04476.1|AE004539_18 flagellar hook-associated protein type 3 FlgL [Pseudomonas
aeruginosa PAO1]
gi|218773177|emb|CAW28989.1| flagellar hook-associated protein type 3 FlgL [Pseudomonas
aeruginosa LESB58]
Length = 439
Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats.
Identities = 49/435 (11%), Positives = 119/435 (27%), Gaps = 15/435 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + ++ + +L Q +S+G R+ AD+ + + S
Sbjct: 3 ISTIQAFNNSVSGISRNYADLTRTQAEISAGKRLLTPADDPVGAVRLLQLNQEQALNSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
I + + + ++ V+ I+ +D ++ +E+ Q + +L
Sbjct: 63 KSGITAAKNSLQQEETILNSVGTVIHRIREIAVQAGNGGLDASDKNALATELAQREDELL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++ +G+ G + + D G+ ++ +
Sbjct: 123 NLLNSRDASGKYLFSGSQGDTQPFVRNPDGTYSYNGDEGQREVQIASSTFIAISDNGKIL 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + D S+ T + +S L +
Sbjct: 183 FESGSNANRVSTGKDAAGPDASGNPSDSSISLGLVTDKEAYDTVFPSSTPPLASDGVGIH 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ L P + ++ S + AS + ++
Sbjct: 243 FTDAKNYVVYDLKTIPPGYDWSTSDPNPPSFATLASGKIDDNAQTSDFITFGGVKVQIDG 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T + + T+ + + + + A
Sbjct: 303 EPQGGDTFSIKRQPDQEKRSLLNTVSDLRKALLSAEDTPAGNLAI------------RDA 350
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ +S +D+ G+IG+ + E FI + + ++ D D +
Sbjct: 351 VGVAISNLDSSNSQILTGQGRIGARMNVAESTETFIDDVTLVNTAVISQIQDLDYPEALS 410
Query: 421 RLSALQTQQQLAVQA 435
RL+ T A Q+
Sbjct: 411 RLTLQSTIMDAAQQS 425
>gi|323491435|ref|ZP_08096619.1| flagellin [Vibrio brasiliensis LMG 20546]
gi|323314304|gb|EGA67384.1| flagellin [Vibrio brasiliensis LMG 20546]
Length = 377
Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats.
Identities = 48/357 (13%), Positives = 101/357 (28%), Gaps = 3/357 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L L +R+SSG R++ A D+AA I+ ++S L
Sbjct: 4 TVNTNVSAMTAQRHLSKATDLLNQSLERLSSGNRINSAKDDAAGLQISNRLESQMRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S + A+ M++ +++ +++ + ++Q E++ L +L
Sbjct: 64 AMRNANDGISIMQTAEGAMNETTNLLQRMRDLSLQSANGSNSRAERDALQEEMSALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L SS I S + +
Sbjct: 124 NRIAETTSFGGRKLLNGSFSSSAFQIGASSGEAVQVSLKNMRSDSLDMGGFSYIAAGKAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + Q + T +
Sbjct: 184 SNWQVAQGSNTLVMEYTNAQGQQETININAKVGDDIEELATYINGQTDKVSASVNEEGQL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + N S + + + T + S
Sbjct: 244 QIFMAGKQASGTVSFSGSLANQLSMNLAGYEAVDNIDISQAGGAQRAVSIIDTALKYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + + + L + K+ D + + + +
Sbjct: 304 HRAELGAMQNRFNHAINNLSNVNENLSASNSRIKDTDYAKETTQMVKQQILQQVSTS 360
Score = 97.5 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/375 (12%), Positives = 107/375 (28%), Gaps = 11/375 (2%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
A+ +SKA D+++ ++ + + + +
Sbjct: 13 TAQRHLSKATDLLNQSLERL-----SSGNRINSAKDDAAGLQISNRLESQMRGLDVAMRN 67
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ G S A+ + ++ D+ +
Sbjct: 68 ANDGISIMQTAEGAMNETTNLLQRMRDLSLQSANGSNSRAERDALQEEMSALNDELNRIA 127
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K ++ S ++ I + S +++ + IA
Sbjct: 128 ETTSFGGRKLLNGSFSSSAFQIGASSGEAVQVSLKNMRSDSLDMGGFSYIAAGKADSNWQ 187
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A + T + + + DI AT N T + + ++
Sbjct: 188 VAQGSNTLVMEYTNAQGQQETININAKVGDDIEELATYINGQTDKVSASVNEEGQLQIFM 247
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
T S + L + ++ + VS IDT +K
Sbjct: 248 AGKQASGTVSFSGSLAN------QLSMNLAGYEAVDNIDISQAGGAQRAVSIIDTALKYV 301
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ ++G++ +R + + + + + + R+ D D A E+T++ Q QQ++
Sbjct: 302 DSHRAELGAMQNRFNHAINNLSNVNENLSASNSRIKDTDYAKETTQMVKQQILQQVSTSI 361
Query: 436 LSIVNNSTARILSLF 450
L+ L+L
Sbjct: 362 LAQAKQQPNLALTLL 376
>gi|24113299|ref|NP_707809.1| flagellin [Shigella flexneri 2a str. 301]
gi|30063365|ref|NP_837536.1| flagellin [Shigella flexneri 2a str. 2457T]
gi|110805896|ref|YP_689416.1| flagellin [Shigella flexneri 5 str. 8401]
gi|1169702|sp|Q08860|FLIC_SHIFL RecName: Full=Flagellin
gi|391898|dbj|BAA04093.1| flagellin [Shigella flexneri]
gi|24052308|gb|AAN43516.1| flagellin [Shigella flexneri 2a str. 301]
gi|30041617|gb|AAP17345.1| flagellin [Shigella flexneri 2a str. 2457T]
gi|110615444|gb|ABF04111.1| flagellin [Shigella flexneri 5 str. 8401]
gi|281601364|gb|ADA74348.1| Flagellin [Shigella flexneri 2002017]
gi|313650141|gb|EFS14554.1| flagellin [Shigella flexneri 2a str. 2457T]
gi|332756074|gb|EGJ86427.1| flagellin [Shigella flexneri 4343-70]
gi|332757338|gb|EGJ87675.1| flagellin [Shigella flexneri 2747-71]
gi|332757483|gb|EGJ87818.1| flagellin [Shigella flexneri K-671]
gi|332766656|gb|EGJ96860.1| putative flagellin [Shigella flexneri 2930-71]
gi|333003344|gb|EGK22890.1| flagellin [Shigella flexneri K-218]
gi|333017629|gb|EGK36941.1| flagellin [Shigella flexneri K-304]
Length = 550
Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats.
Identities = 51/377 (13%), Positives = 102/377 (27%), Gaps = 5/377 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGGGAVAN 183
Query: 180 STDGTERYGLLDRN--HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + S A + +A
Sbjct: 184 TAASKADLVAANATVVGNKYTVSAGYDAAKASDLLAGVSDGDTVQATINNGFGTAASATN 243
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ + A+ A + + T ++
Sbjct: 244 YKYDSASKSYSFDTTTASAADVQKYLTPGVGDTAKGTITIDGSAQDVQISSDGKITASNG 303
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
T + K G+ + +TL + ID G + ++
Sbjct: 304 DKLYIDTTGRLTKNGSGASLTEASLSTLAANNTKATTIDIGGTSISFTGNSTTPDTITYS 363
Query: 358 KLAMEEMVSFIDTQIKC 374
+ + D +
Sbjct: 364 VTGAKVDQAAFDKAVST 380
Score = 99.8 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 47/358 (13%), Positives = 94/358 (26%)
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
G S L +++A+ K S
Sbjct: 193 AANATVVGNKYTVSAGYDAAKASDLLAGVSDGDTVQATINNGFGTAASATNYKYDSASKS 252
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
+ V + T D + + +
Sbjct: 253 YSFDTTTASAADVQKYLTPGVGDTAKGTITIDGSAQDVQISSDGKITASNGDKLYIDTTG 312
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
T + AAN T I + P+T + + A
Sbjct: 313 RLTKNGSGASLTEASLSTLAANNTKATTIDIGGTSISFTGNSTTPDTITYSVTGAKVDQA 372
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
A + +++ + + T + + + + T T +D
Sbjct: 373 AFDKAVSTSGNNVDFTTAGYSVNGTTGAVTKGVDSVYVDNNEALTTSDTVDFYLQDDGSV 432
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ V + TDA + + + +D I +G++ +R+
Sbjct: 433 TNGSGKAVYKDADGKLTTDAETKAATTADPLKALDEAISSIDKFRSSLGAVQNRLDSAVT 492
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 493 NLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 550
>gi|114054782|gb|ABI49992.1| FlaA [Clostridium botulinum]
gi|114054784|gb|ABI49993.1| FlaA [Clostridium botulinum]
Length = 279
Score = 123 bits (307), Expect = 6e-26, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 89/252 (35%), Gaps = 3/252 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D ++ E+ +LQ ++
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVGVDKNNLDKEVKELQKEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN +N L D+ + + + + + + + + + S
Sbjct: 123 RISSQTQFNTKNLLNGDVTGTGSELTFQIGANSGQTIQLAISAMDVAALGVASDKVTIGS 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + + ++ D
Sbjct: 183 AKKASEITKMIETIDKAINTVSGERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVD 242
Query: 241 QAKGIATIPVPL 252
AK +
Sbjct: 243 MAKEMMNFTKTN 254
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 36/89 (40%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+M+ ID I + K+G+ +R+ + + ++ R+ D DMA E
Sbjct: 191 KMIETIDKAINTVSGERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNF 250
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q A L+ N + +L L R
Sbjct: 251 TKTNILTQAAQAMLAQANQAPQGVLQLLR 279
>gi|296125671|ref|YP_003632923.1| flagellin domain protein [Brachyspira murdochii DSM 12563]
gi|296017487|gb|ADG70724.1| flagellin domain protein [Brachyspira murdochii DSM 12563]
Length = 290
Score = 123 bits (307), Expect = 6e-26, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 77/205 (37%), Gaps = 3/205 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N SA++A + L+ +L ++SSGLR++ A D+A+ ++++ M++ L
Sbjct: 2 VINNNISAINAQRTLKFRQVDLRKDAAQISSGLRINQAGDDASGLAVSEKMRTQIRGLRQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
G S + + + + +++ I+ D +Q E++QL ++
Sbjct: 62 AERNTQDGISFIQTTEGYLEETTNILQRIRELAIQAANGIYTDEDRLYVQIEVSQLVDEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FN N L ST + N + ++ + + L +
Sbjct: 122 DRVASQAQFNKLNMLTGRFARSTGENTPTASMWLHIGANMDERKRVYIGTMNSQALGLKN 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLK 204
+ + K +
Sbjct: 182 PVGPATSATFISVSSPAKANSVIGM 206
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 19/162 (11%), Positives = 49/162 (30%)
Query: 290 RATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRH 349
+ N +T + + ++ + +
Sbjct: 129 QFNKLNMLTGRFARSTGENTPTASMWLHIGANMDERKRVYIGTMNSQALGLKNPVGPATS 188
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
A + + ++ +D + +G+ +R+ + + + + ++ R
Sbjct: 189 ATFISVSSPAKANSVIGMVDEALLKVLKQRSDLGAYQNRLEMTAQGLMVGYENMQASESR 248
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D DMA S +L+ Q Q + L+ N L L +
Sbjct: 249 IRDTDMAEASVKLAKDQILNQANLSMLAQANQLPQGALRLLQ 290
>gi|169950581|gb|ACB05822.1| flagellin [Clostridium botulinum]
Length = 273
Score = 123 bits (307), Expect = 6e-26, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 73/194 (37%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNARRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++ E+ +LQ ++
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELAVQAANDTNVSVDKENLDKEVKELQKEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L + T I + + +S
Sbjct: 123 RISSQTQFNTKGLLDGKAENMTFQIGANSGQTIKLTIATMNTSKLGVGATTITLNSGAAS 182
Query: 181 TDGTERYGLLDRNH 194
G N
Sbjct: 183 ITGMISTIDKAINT 196
Score = 86.7 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ ++ M+S ID I +A K+G+ +R+ + + ++ R+ D DM
Sbjct: 178 SGAASITGMISTIDKAINTVSAERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDM 237
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A E + Q A L+ N + +L L R
Sbjct: 238 AKEMMNFTKTNILTQAAQAMLAQANQAPQGVLQLLR 273
>gi|183598661|ref|ZP_02960154.1| hypothetical protein PROSTU_02068 [Providencia stuartii ATCC 25827]
gi|188020847|gb|EDU58887.1| hypothetical protein PROSTU_02068 [Providencia stuartii ATCC 25827]
Length = 360
Score = 123 bits (307), Expect = 6e-26, Method: Composition-based stats.
Identities = 43/255 (16%), Positives = 74/255 (29%), Gaps = 3/255 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++ L L +R+SSG R++ A D+AA +IA ++ L+
Sbjct: 4 VINTNILSLTTQNNLNRSQSVLGTAIERLSSGSRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S +A+ +++ + + I+ SI+ E+ Q ++
Sbjct: 64 ASRNASDGISMAQVAEGAVNEINENLQRIRELTVQAANGSNSDSDITSIRDEVQQRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I + + FNG L D S S + D+ E V +
Sbjct: 124 DRIYQHTEFNGTQILNGDTVSYQVGAKDGQTISMEMQKMDLDTLGIKDFKDKVEKVSAAA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + K K AT
Sbjct: 184 AGPKEPAGKGTAISVDADNYAVASAGGAKIGTAEIYADKADATKFYIKDTTDNKWYEATK 243
Query: 240 DQAKGIATIPVPLPA 254
D A
Sbjct: 244 DTTTTSGKTEYVKGA 258
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 52/142 (36%)
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
T D++ + + S T + T A + + +D
Sbjct: 219 YADKADATKFYIKDTTDNKWYEATKDTTTTSGKTEYVKGAEITGLGGGTAAKSDALDTLD 278
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
T +K + K+G+ +R+ + + + + R+ DAD A+E + +S Q Q
Sbjct: 279 TALKNVDSYRSKLGAFQNRMQSTINNLNNSVNNLSAARSRIQDADFATEVSNMSRGQILQ 338
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 339 QAGTSVLAQANQVPQGVLSLLR 360
>gi|27363695|ref|NP_759223.1| flagellin [Vibrio vulnificus CMCP6]
gi|27359811|gb|AAO08750.1| Flagellin protein flaE [Vibrio vulnificus CMCP6]
Length = 375
Score = 123 bits (307), Expect = 6e-26, Method: Composition-based stats.
Identities = 42/229 (18%), Positives = 86/229 (37%), Gaps = 3/229 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN SAM A + L + Q +SSG R++ A+D+AA IA + L
Sbjct: 1 MVSLNTNVSAMVAQRHLSTAASQVAETQKNLSSGFRINSASDDAAGMQIANTLHVQTRGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ + A+ + + +++ +++ D +S+Q E+ L+
Sbjct: 61 DVALTNAHSAYAVAETAEGALEEGSEILQRLRSLSLQAANGSNSDEDRQSLQLEVVVLKD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IAR ++F G+N GS + + + ++ N + + + Y +
Sbjct: 121 EVERIARTTTFAGKNLFDGSYGSKSFHLGANSNSISLQLKNMRTHVPEMGGYHYLASEPA 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
D + L + I + D+ ++T
Sbjct: 181 DEDWQVDKESRQLSFTFRDSEGDDQSIKISLKPGDSLEEVATYINSQQN 229
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ++ +DT I+ + +IGS +R+ D ++ + V + GR+ D D
Sbjct: 279 ISSVGGAQLAIAVVDTAIQYLDSHRSEIGSFQNRVEGTMDNLQSINRNVTESKGRIWDTD 338
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A ST L Q QQ L+ + + L
Sbjct: 339 FAKASTALVKSQVLQQATSALLAQAKQAPGSAIGLL 374
>gi|24214719|ref|NP_712200.1| flagellin protein [Leptospira interrogans serovar Lai str. 56601]
gi|26454628|sp|O51941|FLAB_LEPIN RecName: Full=Flagellar filament 35 kDa core protein; AltName:
Full=35 kDa antigen; AltName: Full=Flagellin class B
gi|24195712|gb|AAN49218.1| flagellin protein [Leptospira interrogans serovar Lai str. 56601]
Length = 283
Score = 123 bits (307), Expect = 6e-26, Method: Composition-based stats.
Identities = 32/255 (12%), Positives = 80/255 (31%), Gaps = 3/255 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + L+ ++ +SSG+R++ AAD+A+ ++++ +++ L
Sbjct: 3 INHNLSAVNAHRSLKFNELAVDKTMKALSSGMRINSAADDASGLAVSEKLRTQINGLRQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + A+ + + +++ I+ D + +Q E++ L ++
Sbjct: 63 ERNTEDGMSFIQTAEGFLEQTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + + ++ + I T+
Sbjct: 123 RIASQAEFNKFKLFEGQFARGSRVASMWFHMGPNQNQRERFYIGTMTSKALKLVKADGRP 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ D + + + L + + D
Sbjct: 183 IAISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRD 242
Query: 241 QAKGIATIPVPLPAA 255
+ +
Sbjct: 243 ADMAEEVVSLTTKQI 257
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ D + +G+ +R+ + + ++ R+ DAD
Sbjct: 185 ISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDAD 244
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E L+ Q Q L+ N +L L +
Sbjct: 245 MAEEVVSLTTKQILVQSGTAMLAQANMKPNSVLKLLQ 281
>gi|308175268|ref|YP_003921973.1| flagellin protein [Bacillus amyloliquefaciens DSM 7]
gi|307608132|emb|CBI44503.1| flagellin protein [Bacillus amyloliquefaciens DSM 7]
Length = 328
Score = 123 bits (307), Expect = 6e-26, Method: Composition-based stats.
Identities = 47/300 (15%), Positives = 100/300 (33%), Gaps = 3/300 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ S++L + +++SSGLR++ A D+AA +I++ M+S L
Sbjct: 3 INHNIAALNTSRQLNAGSNAASKNMEKLSSGLRINRAGDDAAGLAISEKMRSQIRGLDMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + ++ +++ ++ + T +D +Q E+ QL S++
Sbjct: 63 SKNAQDGISLIQTSEGALNETHSILQRMSELATQAANDTNTDSDRSELQKEMDQLASEVT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L T I + + N +
Sbjct: 123 RISTDTEFNTKKLLDGTAKDLTFQIGANEGQTMSLSINKMDSESLQVGTTYTANTDGSKL 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ L + D + S + K + KAA++
Sbjct: 183 VTADGKEATLVTDGSKGPNGYYDTDDKLVYQADSALAADTKVTKGIDISSSAKAASSALT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
K A A + + + + + T D+ + + ++
Sbjct: 243 TIKTAIDTVSSERAKLGAVQNRLEHTINNLGTSSENLTSAESRIRDVDMASEMMEYTKNN 302
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/252 (11%), Positives = 66/252 (26%)
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
+ + + S+ ++T+ T + A + I
Sbjct: 65 NAQDGISLIQTSEGALNETHSILQRMSELATQAANDTNTDSDRSELQKEMDQLASEVTRI 124
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
+ + T N + T++ +
Sbjct: 125 STDTEFNTKKLLDGTAKDLTFQIGANEGQTMSLSINKMDSESLQVGTTYTANTDGSKLVT 184
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
A D K + S + + D + A ++ I
Sbjct: 185 ADGKEATLVTDGSKGPNGYYDTDDKLVYQADSALAADTKVTKGIDISSSAKAASSALTTI 244
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
T I ++ K+G++ +R+ + + + + R+ D DMASE +
Sbjct: 245 KTAIDTVSSERAKLGAVQNRLEHTINNLGTSSENLTSAESRIRDVDMASEMMEYTKNNIL 304
Query: 429 QQLAVQALSIVN 440
Q + L+ N
Sbjct: 305 TQASQAMLAQAN 316
>gi|189339494|gb|ABD33768.2| flagellin [Bacillus thuringiensis serovar kumamotoensis]
Length = 399
Score = 123 bits (307), Expect = 6e-26, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 87/205 (42%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++ + +R + DR+SSG R+++A+D+AA +IA M++ L+
Sbjct: 36 INTNINSLRTQEYMRQNQSKMSNSMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVA 95
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + M+ +++ +++ ++ ++Q E +LQ Q+
Sbjct: 96 ANNTQDGMSLIRTADSAMNSVSNILLRMRDIANQSANGTNTDSNKSALQKEFDELQKQIT 155
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L+ D ++ S I + V + + +
Sbjct: 156 YIADNTQFNDKNLLKEDSEVKIQTLDSSSSEQQIGINLKAVTLEKLGIDKISIGAGAGAG 215
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
G + D + K + KD
Sbjct: 216 GAGGTKIEQTDIDAVTKGIADLTKD 240
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 43/140 (30%)
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ + + L EK E V ID
Sbjct: 260 MDPAEATAIDDALNAFKAGTATVDTVKDIQDALKGATLPKATDAAEKDNALEAVKAIDKA 319
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ +G+ +R+ + +K ++ ++ DADMA E + ++ + +
Sbjct: 320 LTTVADNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEA 379
Query: 432 AVQALSIVNNSTARILSLFR 451
+ LS N + + L +
Sbjct: 380 GISMLSQANQTPQMVSKLLQ 399
>gi|157691933|ref|YP_001486395.1| flagellin [Bacillus pumilus SAFR-032]
gi|157680691|gb|ABV61835.1| flagellin [Bacillus pumilus SAFR-032]
Length = 301
Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats.
Identities = 34/280 (12%), Positives = 72/280 (25%)
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
GL + + S +
Sbjct: 22 SANNGASQKNMEKLSSGLKINRAGDDAAGLAISEKMRGQIRGLEMASKNAQDGISLIQTA 81
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
A T + + + V T G + ++ GN
Sbjct: 82 EGALTETHSILQRVRELVVQAGNTGTQDGTDLGAIQEEINNLIKEIGGGTDGNGISDRTE 141
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
+ + T++ ++G + S + + V+
Sbjct: 142 FNGKKLLNGDFETDTLTFQIGANKAQKLDVNIKAMSADKIGTDPTDATKTVSAIKVTDFA 201
Query: 352 TDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
T A + + +D IK + K+G++ +R+ + + + + R+
Sbjct: 202 TIAAGAAGGFNDQLDIVDNAIKQVSDQRSKLGAVQNRLEHTINNLGASSENLTAAESRIR 261
Query: 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D DMA E + + Q + L+ N +L L R
Sbjct: 262 DVDMAKEMSEFTKNNILSQASQAMLAQANQQPQNVLQLLR 301
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 83/291 (28%), Gaps = 3/291 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ +L N + +++SSGL+++ A D+AA +I++ M+ L
Sbjct: 8 INHNIAALNTLNRLSANNGASQKNMEKLSSGLKINRAGDDAAGLAISEKMRGQIRGLEMA 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
S G S + A+ +++ ++ ++ + G +++ +Q ++ ++
Sbjct: 68 SKNAQDGISLIQTAEGALTETHSILQRVRELVVQAGNTG---TQDGTDLGAIQEEINNLI 124
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ + +D + ++ + + D
Sbjct: 125 KEIGGGTDGNGISDRTEFNGKKLLNGDFETDTLTFQIGANKAQKLDVNIKAMSADKIGTD 184
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
K+ + D + +++ N
Sbjct: 185 PTDATKTVSAIKVTDFATIAAGAAGGFNDQLDIVDNAIKQVSDQRSKLGAVQNRLEHTIN 244
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
+ L AA + + + +
Sbjct: 245 NLGASSENLTAAESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQQPQN 295
>gi|114054929|gb|ABI50064.1| FlaA [Clostridium botulinum]
Length = 266
Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 79/193 (40%), Gaps = 3/193 (1%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L S
Sbjct: 1 NHNLNAMNAXRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQAS 60
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
S + A+ +++ ++ ++ G D +I++EIT+L +++
Sbjct: 61 RNSQDSISLIQTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEINR 120
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I++ + FN + L + T I + + T + T L +++
Sbjct: 121 ISKQTEFNTQKLLSGGFSAKTFQIGANKAQTLTLTIGDMSAKTLGVSGVSVSTAALATAS 180
Query: 182 DGTERYGLLDRNH 194
T L +
Sbjct: 181 IETIDTALGKVST 193
Score = 84.4 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 39/110 (35%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T + + + + IDT + + K+G+ +R+ + +
Sbjct: 157 GDMSAKTLGVSGVSVSTAALATASIETIDTALGKVSTERAKLGANQNRLEHTINNLNTSS 216
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ ++ R+ D DMA E S Q A L+ N + +L L
Sbjct: 217 ENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLL 266
>gi|317051726|ref|YP_004112842.1| flagellin domain-containing protein [Desulfurispirillum indicum S5]
gi|316946810|gb|ADU66286.1| flagellin domain protein [Desulfurispirillum indicum S5]
Length = 849
Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats.
Identities = 43/351 (12%), Positives = 109/351 (31%), Gaps = 6/351 (1%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
+N +A+ + L L+ +R+SSG+R++ A+D+A+ +I++ M++ ++
Sbjct: 7 SNATALGSMNALNMHGSPLKNALERISSGIRINQASDDASGMAISEKMRNQIQGINRAIR 66
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDI 122
G S + A+ + + ++ ++ +D + IQ E+ QL +++ I
Sbjct: 67 NSQDGISLIQTAEGALQETTAILQRMRELSVQAATSSINASDRQEIQREVDQLIAEVDRI 126
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ + FN + L + ++ S I + IRD + +L S+
Sbjct: 127 SSSTEFNTKKLLSGEGTATWRSTDPDRISAIIRDRVVSGNYRIDVEAKVGKNQVLKSNIM 186
Query: 183 ---GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G + + + + + + T ++ + A A
Sbjct: 187 VLQPGAYAGDIITSGTLLGDVANNSGVVGIYEADNLRTGTADQRIYKVNVAAASAGAPLI 246
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
V + G+ + + + + G + +
Sbjct: 247 QGMPPEIFSTVGDLGSIMGTYQQPGSQFMITGTEFSDTAVLSSGEMVFSSGINLQAGVHG 306
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
+ + VD + + +
Sbjct: 307 YLEIEFMAGVTIESGATDVDPQGVRIRFIDVKTGNMGDWAMGTLDRSGFID 357
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 44/94 (46%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + + ++ +D I+ ++G+I +R+ + + + +++ R+ D DMA
Sbjct: 753 TEESAAKAITQVDRAIELVNTERSRLGAIGNRLDHTVNNLSVAEQSLQHSESRIRDTDMA 812
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+E + L++ Q + A L+ N ++ L
Sbjct: 813 NEISTLTSKQVLSEAARAMLAQANQMPRGLIQLL 846
>gi|322378874|ref|ZP_08053291.1| flagellin B [Helicobacter suis HS1]
gi|322380401|ref|ZP_08054607.1| flagellin B [Helicobacter suis HS5]
gi|321147191|gb|EFX41885.1| flagellin B [Helicobacter suis HS5]
gi|321148684|gb|EFX43167.1| flagellin B [Helicobacter suis HS1]
Length = 514
Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats.
Identities = 74/514 (14%), Positives = 148/514 (28%), Gaps = 70/514 (13%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A N +L +++SSGLR++ AAD+A+ +IA ++S + +L
Sbjct: 5 INTNVAALNAHTIGVRNNRDLASSLEKLSSGLRINKAADDASGMAIADSLRSQSASLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
V A M + I ++ T+K K + K++QS+I +L +L
Sbjct: 65 IKNANDAIGIVQTADKAMDEQIKILDTVKTKAVQAAQDGQTAETRKALQSDILRLLEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I + + + D
Sbjct: 125 NIANTTSFNGQQLLAGSFSNKEFQIGAYSNTTIKASIGPTGSDKIGHVRFETSAMDRDGM 184
Query: 181 --------------TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ +K+ + V + +T +
Sbjct: 185 EVSAGAKNLQEVTLNFRQANAVNDFKIESVKISTSAGTGLGALVEVINKNSNTLGVRATA 244
Query: 227 TSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD 286
T + + N G + SV +
Sbjct: 245 TVMGTGGEPVQSGTVKGLTINGVMIGTINDVKRNDRDGRLINAINSVKERTGVEAYIDIS 304
Query: 287 IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI 346
+ + + +++ G ++ + + + + D+ +++
Sbjct: 305 GRINLKSTDGRAISVHAISASGKVFGGGNFAGISGNAHAIIGRLTLIKQDARDIVISGIN 364
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
H + + I A G ++ Q +F K + V
Sbjct: 365 YSHIGLHSAQGIAEYSVNLRAIRGVFD--ANVASASGGNANAAQAQLNF-KGIGAGVTSL 421
Query: 407 VGRLVDADMASESTRLSALQTQQQLA-VQA------------------------------ 435
G +V DMA ES R+ + + L VQ
Sbjct: 422 RGAMVVMDMA-ESARVQLDKIRSDLGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAE 480
Query: 436 ------------------LSIVNNSTARILSLFR 451
++ N +L L +
Sbjct: 481 ESASFSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|332093116|gb|EGI98180.1| flagellin domain protein [Shigella boydii 5216-82]
Length = 239
Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 70/209 (33%), Gaps = 3/209 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + + + +
Sbjct: 124 DRVSGQTQFNGVNVLSKDGSMKIQVGANDGETITIDLKKIDSDTLNLAGFNVNGKGSVAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ ++ L V +
Sbjct: 184 TAATSDDLKLAGFTKGTTDTNGVTAYTNT 212
>gi|30721708|gb|AAP34185.1| FliC [Pseudomonas aeruginosa]
Length = 194
Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 46/138 (33%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T S + + + + V ID IK
Sbjct: 57 TSAVSGVVIADTGSTGVGTAAGVTPSATAFAKTNDTVAKIDISTAKGAQSAVLVIDEAIK 116
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + +K + + V GR+ D D A+E+ L+ Q QQ
Sbjct: 117 QIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDFAAETANLTKNQVLQQAGT 176
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 177 AILAQANQLPQSVLSLLR 194
>gi|92114108|ref|YP_574036.1| flagellin-like protein [Chromohalobacter salexigens DSM 3043]
gi|91797198|gb|ABE59337.1| flagellin-like protein [Chromohalobacter salexigens DSM 3043]
Length = 356
Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats.
Identities = 59/350 (16%), Positives = 107/350 (30%), Gaps = 3/350 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +AM Q L L +R+SSGLR++ AAD+AA +IA M S L
Sbjct: 1 MAVINTNITAMIGQQNLSQSQSALSTSMERLSSGLRINSAADDAAGQAIANRMSSQITGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQS 117
S G S + +++ D + ++ + SIQ EI Q
Sbjct: 61 SQAQRNANDGISVAQTTEGALNQVNDNLQRVRELTVQAQNGTNSQEDLDSIQDEINQRLG 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ I+ +SFNG + L +D S ++ + + + + +
Sbjct: 121 EIDRISEETSFNGVDVLASDQEISIQVGSEDGQTITMNLQEVNAETLGLSNFDVSDRAES 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
S+ + + D Y S + + + A
Sbjct: 181 VSAGGYDSGSTVAADDATFSFTDSTGAVSDFDGYSVVENDSGTFVRDDQGNYYDATMSVA 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ D + T +T + + + ++ R + R + +
Sbjct: 241 SADTSSVGVTFDSDSALTADELSTNGLSPLADIDAAISNVDSQRSELGAMQNRFDSAITN 300
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT 347
S S+ Y D S ++ L
Sbjct: 301 LSTTETNLSSARSRIEDADYADEVSNMTRNQILQQAGTSVLAQANQLPQN 350
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/351 (13%), Positives = 89/351 (25%)
Query: 100 ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
+ Q ++Q QS L S D + A +
Sbjct: 5 NTNITAMIGQQNLSQSQSALSTSMERLSSGLRINSAADDAAGQAIANRMSSQITGLSQAQ 64
Query: 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
+ I E L + + L + + L I + G I
Sbjct: 65 RNANDGISVAQTTEGALNQVNDNLQRVRELTVQAQNGTNSQEDLDSIQDEINQRLGEIDR 124
Query: 220 KKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ + L + Q + + T ++ S + +
Sbjct: 125 ISEETSFNGVDVLASDQEISIQVGSEDGQTITMNLQEVNAETLGLSNFDVSDRAESVSAG 184
Query: 280 IRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGY 339
S + T + S ++ V + +
Sbjct: 185 GYDSGSTVAADDATFSFTDSTGAVSDFDGYSVVENDSGTFVRDDQGNYYDATMSVASADT 244
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
S V + + A ++ ID I + ++G++ +R +
Sbjct: 245 SSVGVTFDSDSALTADELSTNGLSPLADIDAAISNVDSQRSELGAMQNRFDSAITNLSTT 304
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ R+ DAD A E + ++ Q QQ L+ N LSL
Sbjct: 305 ETNLSSARSRIEDADYADEVSNMTRNQILQQAGTSVLAQANQLPQNALSLL 355
>gi|149188076|ref|ZP_01866371.1| flagellin [Vibrio shilonii AK1]
gi|148838064|gb|EDL55006.1| flagellin [Vibrio shilonii AK1]
Length = 382
Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats.
Identities = 41/232 (17%), Positives = 78/232 (33%), Gaps = 3/232 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R+SSG +++ A D+AA IA + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNAAENTQKSMERLSSGYKINSAKDDAAGLQIANRLNVQSRGLDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M + +++ +++ + +IQ E+T L +L
Sbjct: 64 AVKNANDGISIAQTAEGAMDETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G L G+ + I + + + N +
Sbjct: 124 NRIAETTSFGGNRLLNGTYGTQSFQIGSNSGEAVMLSMNDMRSDNAQMGGSSYKAANAKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ L + K + + T
Sbjct: 184 ESWTVGAGATLTIDLNDKAGNAMTQIAITGKEGDDIEQLATYINGQTDQVQA 235
Score = 99.4 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 47/385 (12%), Positives = 104/385 (27%), Gaps = 7/385 (1%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ S + A+ ++ A + ++ + + +
Sbjct: 4 NVNTNVSAM-TAQRYLNNAAENTQKSMERL-----SSGYKINSAKDDAAGLQIANRLNVQ 57
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + G S A A+ + ++ + +
Sbjct: 58 SRGLDMAVKNANDGISIAQTAEGAMDETTNILQRMRDLSLQSANGSNSKAERVAIQEEVT 117
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
+ ++ + S I + + S +++ NA +
Sbjct: 118 ALNDELNRIAETTSFGGNRLLNGTYGTQSFQIGSNSGEAVMLSMNDMRSDNAQMGGSSYK 177
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A A T + K+ + DI AT N T +
Sbjct: 178 AANAKDESWTVGAGATLTIDLNDKAGNAMTQIAITGKEGDDIEQLATYINGQTDQVQASV 237
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ E+ + S + N +E V
Sbjct: 238 DEDG-ALQIFASSNGEADSASLTFGGSLAGGSELDLSGAASAVSVNDINVTSVGGAQESV 296
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ +D +K + ++G+ +R + + + + + V R+ D D A E+T ++
Sbjct: 297 AILDAALKYVDSNRAELGAFQNRFNHAINNLDNINENVNASKSRIEDTDYAKETTAMTKN 356
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q QQ + L+ S + LSL
Sbjct: 357 QILQQASTSILAQAKQSPSAALSLL 381
>gi|37679159|ref|NP_933768.1| flagellin [Vibrio vulnificus YJ016]
gi|37197901|dbj|BAC93739.1| polar flagellin FlaE [Vibrio vulnificus YJ016]
Length = 375
Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 86/229 (37%), Gaps = 3/229 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN SAM A + L + Q +SSG R++ A+D+AA IA + L
Sbjct: 1 MVSLNTNVSAMVAQRHLSTAASQVAETQKNLSSGFRINSASDDAAGMQIANTLHVQTRGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ + A+ + + +++ +++ D +S+Q E+ L+
Sbjct: 61 DVALTNAHSAYAVAETAEGALEEGSEILQRLRSLSLQAANGSNSDEDRQSLQLEVVVLKD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IAR ++F G+N GS + + + ++ N + I + Y +
Sbjct: 121 EVERIARTTTFAGKNLFDGSYGSKSFHLGANSNSISLQLKNMRTHIPEMGGYHYLASEPA 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
D + L + I + D+ ++T
Sbjct: 181 DEDWQVDKESRQLSFTFRDSEGDDQSIKISLKPGDSLEEVATYINSQQN 229
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ++ +DT I+ + +IGS +R+ D ++ + V + GR+ D D
Sbjct: 279 ISSVGGAQLAIAVVDTAIQYLDSHRSEIGSFQNRVEGTMDNLQSINRNVTESKGRIWDTD 338
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A ST L Q QQ L+ + + L
Sbjct: 339 FAKASTALVKSQVLQQATSALLAQAKQAPGSAIGLL 374
>gi|191168280|ref|ZP_03030073.1| flagellin FliC [Escherichia coli B7A]
gi|209919345|ref|YP_002293429.1| flagellin [Escherichia coli SE11]
gi|190901652|gb|EDV61408.1| flagellin FliC [Escherichia coli B7A]
gi|209912604|dbj|BAG77678.1| flagellar protein FliC [Escherichia coli SE11]
Length = 579
Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats.
Identities = 51/352 (14%), Positives = 100/352 (28%), Gaps = 3/352 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLSGFNVNGGGAVAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + VS + T + LA + AN
Sbjct: 184 TAATKSDLAAAQLLAPGTADANGTVTYTVSAGLKTSTAADVIASLANNAKVNATIANGFG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
T + +GT+ S S + + ++
Sbjct: 244 SPTATDYTYNSATGDFTYSATIAAGTNSGDSNSAQLQSFLTPKAGDTANLNVKIGSTSID 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
++ + + ++D + + K + T
Sbjct: 304 VVLASDGKITAKDGSELFIDVDGNLTQNNAGTVKAATLDALTKNWHTTGTPG 355
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/235 (13%), Positives = 66/235 (28%)
Query: 218 STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASA 277
+ T A N +S + +
Sbjct: 345 TKNWHTTGTPGAVSTVITTEDETTFTLAGGTDATTSGAITVANARMSAESLQSATKSTGF 404
Query: 278 TYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
T + + + T++TT + +
Sbjct: 405 TVDVGATGNSAGDIKVDSKGIVQQYTGTVFEDAYTKADGSLTTDNTTNLFLQKDGTVTNG 464
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
V ++ + TDA + + + +D I +G++ +R+ +
Sbjct: 465 SGKAVYVSADGNFTTDAETKAATTADPLKALDEAISSIDKFRSSLGAVQNRLDSAVTNLN 524
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 525 NTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 579
>gi|114054923|gb|ABI50061.1| FlaA [Clostridium botulinum]
Length = 266
Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 71/180 (39%), Gaps = 3/180 (1%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L S
Sbjct: 1 NHNLNAMNAXRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQAS 60
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
S + A+ +++ ++ ++ G D +I++EIT+L +++
Sbjct: 61 RNSQDSISLIQTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEINR 120
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I++ + FN + L I + + T + + +
Sbjct: 121 ISQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLTIGDMSAKTLGVSGVSVSDASKATDS 180
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 41/112 (36%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 155 TIGDMSAKTLGVSGVSVSDASKATDSIATIDKALGTVSTERAKLGANQNRLEHTINNLNT 214
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ ++ R+ D DMA E S Q A L+ N + +L L
Sbjct: 215 SSENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLL 266
>gi|317404789|gb|EFV85170.1| flagellin [Achromobacter xylosoxidans C54]
Length = 381
Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats.
Identities = 45/266 (16%), Positives = 76/266 (28%), Gaps = 3/266 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI ++ A L V +R+SSGLR++ AAD+AA SIA +
Sbjct: 68 MPSIRNQALSLRARTNLGKSESAQGVAMERLSSGLRINHAADDAAGESIAGHFTAQLRGQ 127
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQS 117
+ G S + + + + I+ D ++IQ+EI Q +
Sbjct: 128 HQAARNANDGISLAQTIEGALGEMGRSLQRIRELAVQSQNGTLSLDDLQAIQAEIDQHLA 187
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ I+ + FN + L D+ I + +D L
Sbjct: 188 EIERISHQTRFNNLDVLAQDVDIPLQIGVNDGDTIDINTRRVDTKTLELDRIDVVHDPRL 247
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ D T D + T A++ +
Sbjct: 248 GGAVDRTVIDTEPDPAPTAPPPAVAPPPAIAPPTTTATLNMRSGSTTLTMFQAFMVRYDF 307
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTS 263
P P T
Sbjct: 308 NGATYYNAQVHDFPTPGVIVNYQVTP 333
>gi|269976129|ref|ZP_06183127.1| flagellin [Mobiluncus mulieris 28-1]
gi|269935675|gb|EEZ92211.1| flagellin [Mobiluncus mulieris 28-1]
Length = 461
Score = 123 bits (307), Expect = 8e-26, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 50/144 (34%)
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
+A + T ID+ + + + + + +++
Sbjct: 318 MAHSITSLADKKTAGQDDVHVPLKAFGIDNNEITDVDKLVFKDDALTVVDHDSAQNLINV 377
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+D +I + A IG+I +R + + + + R+ D DMA E + + Q
Sbjct: 378 LDRKISSVSTARANIGAIQNRFEHTITNLNVAVENLAASESRIRDTDMAQEMMQFTRNQI 437
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
Q L+ N +LSL R
Sbjct: 438 LSQAGTSMLAQANQVPQGVLSLLR 461
>gi|293604979|ref|ZP_06687376.1| flagellin [Achromobacter piechaudii ATCC 43553]
gi|292816807|gb|EFF75891.1| flagellin [Achromobacter piechaudii ATCC 43553]
Length = 557
Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats.
Identities = 45/367 (12%), Positives = 94/367 (25%), Gaps = 3/367 (0%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN+ ++ A L +L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 3 AVINTNYLSLVAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGMAIANRFTANVKGLT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQ 118
+ G S + S+ + ++ + S+Q EI Q S
Sbjct: 63 QAARNANDGISLAQTTEGAASEVNTHLQRVRELSVQASNGSYSQEQLNSMQDEINQRLSD 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ I++ + FNG L T + + + + + T + +
Sbjct: 123 IDRISQQTDFNGVKVLSDSAKPLTLQVGANDGETITLNLSEISVKTLGLDGFNVNGSGVT 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ T + V D + ++ SG
Sbjct: 183 QNRSATVSDLQAAGGVAAGNDWTVTTTHKAVSADQAFGKLQNGNTVSVGSGTAATTYTYD 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
T AA S + + + + +
Sbjct: 243 ATNKNFTFTDKSASNAAAITTLANSLRPATGTTTATYTHNNGGSTEFQVDATGKVTIGGQ 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ + + + S +
Sbjct: 303 DAFLDAAGNLTTNNASATAATLNTVLTATANTGAAGASSVSIGGKTYNSTGTANALSFTN 362
Query: 359 LAMEEMV 365
+ +
Sbjct: 363 TIASDAL 369
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/353 (11%), Positives = 94/353 (26%)
Query: 99 VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN 158
T + ++ GS + + KS +
Sbjct: 205 TVTTTHKAVSADQAFGKLQNGNTVSVGSGTAATTYTYDATNKNFTFTDKSASNAAAITTL 264
Query: 159 GKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
T ST+ ++ + A+
Sbjct: 265 ANSLRPATGTTTATYTHNNGGSTEFQVDATGKVTIGGQDAFLDAAGNLTTNNASATAATL 324
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
+GA ++ + + L + + + + + +
Sbjct: 325 NTVLTATANTGAAGASSVSIGGKTYNSTGTANALSFTNTIASDALLANVKANANASVTLG 384
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
+ + + ++ G +T +T T+ S
Sbjct: 385 QGITSATLTFATGDSTDTYVDGKGEFTTTKTYDTTYTVDPNTGKATVKSGTGTGDYAPKV 444
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ +N + T+ ++ + + +D G++G++ +R+ +
Sbjct: 445 GAEAKVNSSGVLTTENTSKGTKTSDPMKTLDAAFTKLDKLTGELGAVQNRLESTIANLNN 504
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + R+ DAD A+E + +S Q QQ L+ N +LSL R
Sbjct: 505 VVNNLSNARSRIQDADYATEVSNMSKAQILQQAGTSVLAQANQVPQTVLSLLR 557
>gi|313755745|gb|ADR77819.1| flagellin [Salmonella enterica subsp. enterica serovar Typhi]
Length = 347
Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 64/164 (39%), Gaps = 3/164 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +I+ ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ D + I+ S SIQ EITQ S++
Sbjct: 64 ASRNANDGISLAQTTEGALNEVNDNLQNIRRLTVQAQNGSNSSSDLKSIQDEITQRMSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
I+ + FNG L +D + A I
Sbjct: 124 NRISEQTDFNGVKVLSSDQKLTIQVGANDGETIDIDLQKIDSTK 167
Score = 113 bits (281), Expect = 8e-23, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 50/139 (35%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ + T D + ++ T A + M + ++ +D +
Sbjct: 209 FSGKDATGKDTFYVETTDKGVKTYKEATIAEDGTTGKAKITEGTTDVKMADPLATLDKAL 268
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+G++ +R + + + + R+ DAD A+E + +S QQ
Sbjct: 269 SQVDGLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEVSNMSRANILQQAG 328
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N +T +LSL R
Sbjct: 329 TSVLAQANQTTQNVLSLLR 347
>gi|514988|dbj|BAA06987.1| flagellin [Serratia marcescens]
Length = 348
Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 71/203 (34%), Gaps = 3/203 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L +L +R+SSGLR++ A D+AA +I+ ++ L+
Sbjct: 4 VINTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISDRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ D + I+ + SIQ EITQ S++
Sbjct: 64 ASRNANDGISLAQTTEGALNEVNDNLQNIRRLTVQAQNGSNSTSDLKSIQDEITQRMSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FNG L +D + A I T + + +
Sbjct: 124 NRISEQTDFNGVKVLSSDQKLTIQVGANDGETIDIDLQGLTGFDVTENGTKIGSAIADKA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQV 202
+ +
Sbjct: 184 MVKDDTGTDVAFDLGESFQTGGA 206
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T T+ + T I + +++ ++ +D +
Sbjct: 211 TLVSGKTKDGKEGYYIQTTDAATGAKTYATAKIDDKGVVTKGADVTDVKDPLATLDKALA 270
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ +R + + + R+ DAD A+E + +S QQ
Sbjct: 271 QVDGLRSSLGAVQNRFDSVISNLNSTVNNLSASQSRIQDADYATEVSNMSRAHILQQAGT 330
Query: 434 QALSIVNNSTARILSLFR 451
L+ N ST +LSL R
Sbjct: 331 SVLAQANQSTQNVLSLLR 348
>gi|121997312|ref|YP_001002099.1| flagellar hook-associated protein 3 [Halorhodospira halophila SL1]
gi|121588717|gb|ABM61297.1| flagellar hook-associated protein 3 [Halorhodospira halophila SL1]
Length = 420
Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats.
Identities = 42/434 (9%), Positives = 104/434 (23%), Gaps = 33/434 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T+H +A Q + + Q ++SSG RV +D+ + +K +L
Sbjct: 3 VSTSHMQNTAVQNMTGQQSEINDTQTQLSSGRRVLRPSDDPTSAARTLDLKRATESLERF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ L +++ ++++ + +A + + I+ D I SEI + QL
Sbjct: 63 NRNGDLARTRLSMSESALEQAGNELQRIRELTVQAANGTQDASTRSYIASEIEERYKQLV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++ NGE + + D ++
Sbjct: 123 ELGNSRDGNGEYLFSGSRTRTQPFNMGTDGHVTYHGDQNSREVRIGPGRQIGVDHS-GFD 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + V + +
Sbjct: 182 AFMKVPDGNGQYQAFQGEGNRGTGVVSVVDGKVRSPTAEQYRIRFAEDEDGNTRYAVQRT 241
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ P + + +R+ +
Sbjct: 242 DNPEDENAWEWVGTEDGGPPAVEDAPLYEPGATIEVDDGVRVKIEGHPEPGEDGDGDFFT 301
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ S + ++
Sbjct: 302 ITGSRSQSIFATVNELIGALKEGEGPDFRNAAD--------------------------- 334
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ +D ++ +IG+ S + ++ + +++ D D A +
Sbjct: 335 --RALGDLDLAMENTYRVRSEIGARLSTLDSEKASNEAAIIDLKQATSDERDLDYAEATG 392
Query: 421 RLSALQTQQQLAVQ 434
R + T + A
Sbjct: 393 RFNQELTGLEAAQS 406
>gi|114054893|gb|ABI50046.1| FlaA [Clostridium botulinum]
gi|114054907|gb|ABI50053.1| FlaA [Clostridium botulinum]
Length = 265
Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 71/180 (39%), Gaps = 3/180 (1%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L S
Sbjct: 1 NHNLNAMNARRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQAS 60
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
S + A+ +++ ++ ++ G D +I++EIT+L +++
Sbjct: 61 RNSQDSISLIQTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEINR 120
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I++ + FN + L I + + T + + +
Sbjct: 121 ISQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLTIGDMSAKTLGVSGVSVSDASKATDS 180
Score = 83.3 bits (203), Expect = 9e-14, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 41/111 (36%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 155 TIGDMSAKTLGVSGVSVSDASKATDSIATIDKALGTVSTERAKLGANQNRLEHTINNLNT 214
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
+ ++ R+ D DMA E S Q A L+ N + +L L
Sbjct: 215 SSENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQL 265
>gi|23100182|ref|NP_693649.1| flagellin [Oceanobacillus iheyensis HTE831]
gi|22778414|dbj|BAC14683.1| flagellin [Oceanobacillus iheyensis HTE831]
Length = 338
Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats.
Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 3/259 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A ++L ++ +++SSGL+++ A D+AA +I++ M+ L
Sbjct: 3 INHNISALNAHRQLGANQGGVQGSLEKLSSGLQINKAGDDAAGLAISEKMRGQINGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ G S + A+ +++ ++ ++ D +Q E+ QL ++
Sbjct: 63 TKNAQDGISLIQTAEGALNETHSILQRMRELAVQSSSDTNTEADRAELQKEVDQLAEEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L D ++ A S I + +
Sbjct: 123 RISSDTEFNTQTLLDGDFSATFQIGANSGQNISISVGEMSAGALKVGDTYTATSATEIEF 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+DG+ N + + DV A +
Sbjct: 183 SDGSTATFEDAINVGDDLSGTPATEDDVQAAGYYDGAGNLVVAADEAFAADTTGSVGINI 242
Query: 241 QAKGIATIPVPLPAAPAAP 259
+ A + +
Sbjct: 243 SNRDQADAAITTIDSAIQT 261
Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats.
Identities = 28/209 (13%), Positives = 63/209 (30%)
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
T+ +A SG + S S ++ + S S
Sbjct: 130 FNTQTLLDGDFSATFQIGANSGQNISISVGEMSAGALKVGDTYTATSATEIEFSDGSTAT 189
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
+ ++ + + D + T + + + +
Sbjct: 190 FEDAINVGDDLSGTPATEDDVQAAGYYDGAGNLVVAADEAFAADTTGSVGINISNRDQAD 249
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
++ ID+ I+ +A +G++ +R+ + + + + R+ D DMA E
Sbjct: 250 AAITTIDSAIQTVSAQRSNLGAVQNRLEHTINNLGTSAENLTAAESRIRDVDMAKEMMEF 309
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q A L+ N +L L +
Sbjct: 310 TKNNILSQAAQSMLAQANQQPQGVLQLLQ 338
>gi|256833250|ref|YP_003161977.1| flagellin domain-containing protein [Jonesia denitrificans DSM
20603]
gi|256686781|gb|ACV09674.1| flagellin domain protein [Jonesia denitrificans DSM 20603]
Length = 304
Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 101/274 (36%), Gaps = 3/274 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI N +A+++ + L + +L +++SSG R++ AAD+AA +I++ ++S G L
Sbjct: 3 LSINQNIAAVNSYRNLANTQNDLSKSLEKLSSGFRINRAADDAAGLAISEGLRSQVGGLK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
+ G S V A+ +++ ++ +++ K+I +E TQL S+
Sbjct: 63 VAARNAQDGISVVQTAEGALTETHAILQRLRDLAVQGANDSNNTEARKNIVTEATQLVSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I ++FNG L + A+ + + I L V+
Sbjct: 123 LTRIGESTNFNGTKLLDGGAAAGVATPGTDAYELNFQVGADGNTNSAITVDLKNAHVIGV 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ ++ + ++ + + I+ + ++T N
Sbjct: 183 AEALTVRQWDGGADDWAAAAGAELDFSTHTAAQASITAINAQIESVSTARAELGAYQNRF 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
K I L A+ + T +
Sbjct: 243 EHTIKNINVAVENLSASESRIRDTDMAQEMVQFT 276
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 42/97 (43%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ A + ++ I+ QI+ + A ++G+ +R I + + + R+ D D
Sbjct: 208 FSTHTAAQASITAINAQIESVSTARAELGAYQNRFEHTIKNINVAVENLSASESRIRDTD 267
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + + Q Q L+ N +LSL R
Sbjct: 268 MAQEMVQFTRAQILSQAGTAMLAQANQIPQGVLSLLR 304
>gi|170019739|ref|YP_001724693.1| flagellin [Escherichia coli ATCC 8739]
gi|169754667|gb|ACA77366.1| flagellin domain protein [Escherichia coli ATCC 8739]
Length = 572
Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 67/207 (32%), Gaps = 3/207 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSQSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + + + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSSTLKLTGFNVNGSGSVAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDI 206
+ +
Sbjct: 184 TAATKADLAAAAIGTPGAADSTGAIAY 210
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 56/140 (40%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
NT + T++TT + + V + TDA + + ++ +D I
Sbjct: 433 NTDGTLTTDNTTKLYLQKDGSVTNGSGKAVYVEADGDFTTDAATKAATTTDPLAALDDAI 492
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+G+I +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 493 SQIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAG 552
Query: 433 VQALSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 553 NSVLAKANQVPQQVLSLLQG 572
>gi|197122922|ref|YP_002134873.1| flagellin domain protein [Anaeromyxobacter sp. K]
gi|196172771|gb|ACG73744.1| flagellin domain protein [Anaeromyxobacter sp. K]
Length = 279
Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN ++++A + L LE R+SSG R++ A D+AA +I+ +++ + +
Sbjct: 3 LSIRTNIASLNAQRNLSTTQTALESSMSRLSSGYRITRAGDDAAGLAISTKLEAQIRSYN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQ 118
+ G S + +A +++ +V+S ++ G T+ +Q+E QL+++
Sbjct: 63 QAARNANDGLSVIQTTEAALNETSNVLSRLRELAMQAASDGIGDTERGYVQAEADQLRAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIA 146
+ IA + ++G L + +
Sbjct: 123 IDRIAAVTKYDGTPLLDGTGSALGFQVG 150
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 44/98 (44%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +S +D ++ + + +G++ +R I+ +A+ R+ DAD
Sbjct: 182 FTTATGARDALSTLDAAMETISRSRADLGAVGNRFQSTIANIQSFAEALSAANSRIRDAD 241
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+A E++RL+ QQ V L+ N + L L G
Sbjct: 242 VAEETSRLARANILQQAGVAVLAQANQTPQLALKLLGG 279
>gi|30059878|gb|AAP13311.1| FliC [Escherichia coli]
Length = 576
Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 67/207 (32%), Gaps = 3/207 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSQSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + + + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSSTLKLTGFNVNGSGSVAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDI 206
+ +
Sbjct: 184 TAATKADLAAAAIGTPGAADSTGAIAY 210
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 56/140 (40%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
NT + T++TT + + V + TDA + + ++ +D I
Sbjct: 437 NTDGTLTTDNTTKLYLQKDGSVTNGSGKAVYVEADGDFTTDAATKAATTTDPLAALDDAI 496
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+G+I +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 497 SQIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAG 556
Query: 433 VQALSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 557 NSVLAKANQVPQQVLSLLQG 576
>gi|6941882|gb|AAF32260.1|AF169321_1 flagellin [Escherichia coli]
Length = 550
Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats.
Identities = 51/377 (13%), Positives = 101/377 (26%), Gaps = 5/377 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLSGFNVNGGGSVAN 183
Query: 180 STDGTERYGLLDRN--HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + S A + +A
Sbjct: 184 TAASKADLVAANATVVGNKYTVSAGYDAAKASDLLAGVSDGDTVQATINNGFGTAASATN 243
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ + A+ A + + T ++
Sbjct: 244 YKYDSASKSYSFDTTTASAADVQKYLTPGVGDTAKGTITIDGSAQDVQISSDGKITASNG 303
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
T + K G+ + +TL + ID G + ++
Sbjct: 304 DKLYIDTTGRLTKNGSGASLTEASLSTLAANDTKATTIDIGGTSISFTGNSTTPDTITYS 363
Query: 358 KLAMEEMVSFIDTQIKC 374
+ + D +
Sbjct: 364 VTGAKVDQAAFDKAVST 380
Score = 99.4 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 47/358 (13%), Positives = 94/358 (26%)
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
G S L +++A+ K S
Sbjct: 193 AANATVVGNKYTVSAGYDAAKASDLLAGVSDGDTVQATINNGFGTAASATNYKYDSASKS 252
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
+ V + T D + + +
Sbjct: 253 YSFDTTTASAADVQKYLTPGVGDTAKGTITIDGSAQDVQISSDGKITASNGDKLYIDTTG 312
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
T + AAN T I + P+T + + A
Sbjct: 313 RLTKNGSGASLTEASLSTLAANDTKATTIDIGGTSISFTGNSTTPDTITYSVTGAKVDQA 372
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
A + +++ + + T + + + + T T +D
Sbjct: 373 AFDKAVSTSGNNVDFTTAGYSVNGTTGAVTKGGNSVYVDNNGALTTSDTVDFYLQDDGSV 432
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ V + TDA + + + +D I +G++ +R+
Sbjct: 433 TNGSGKAVYKDADGKLTTDAETKAATTADXLKALDEAISSIDKFRSSLGAVQNRLDSAVT 492
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 493 NLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 550
>gi|188527549|ref|YP_001910236.1| flagellin A [Helicobacter pylori Shi470]
gi|188143789|gb|ACD48206.1| flagellin A [Helicobacter pylori Shi470]
gi|308063608|gb|ADO05495.1| flagellin A [Helicobacter pylori Sat464]
Length = 510
Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats.
Identities = 66/505 (13%), Positives = 139/505 (27%), Gaps = 58/505 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +AM+A + L+ +R+SSGLR++ AAD+A+ ++A ++S +L
Sbjct: 5 VNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQANSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + +A M + + ++ T+K K T + K+IQS+I +L L
Sbjct: 65 IANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +++NG+ L + + S + ++ S
Sbjct: 125 NIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALITASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ N ++ + + I+ + + A + +
Sbjct: 185 DISLTFKQVDGVNDVTLESVKISSSAGTGIGVLAEVINKNSNQTGVRAYANVITTSDVAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR------------------- 281
Q+ ++ + + + S + + + T
Sbjct: 245 QSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQNGRLNLRSLDG 304
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
G + S + N T +
Sbjct: 305 RGIEIKTDSTSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFS 364
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC----------------ATAAAGKI--- 382
N + + + + T G +
Sbjct: 365 AIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVLASGNQSLGAGVTTLRGAMVVI 424
Query: 383 ---GSISSRIHLQEDFIKLMRDAVEKGVGRL--------------VDADMASESTRLSAL 425
S + + +++ + V + D D A ES +
Sbjct: 425 DIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKN 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q A+S N IL L
Sbjct: 485 NILAQSGSYAMSQANTVQQNILRLL 509
>gi|254234223|ref|ZP_04927546.1| flagellar hook-associated protein type 3 FlgL [Pseudomonas
aeruginosa C3719]
gi|126166154|gb|EAZ51665.1| flagellar hook-associated protein type 3 FlgL [Pseudomonas
aeruginosa C3719]
Length = 439
Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats.
Identities = 49/435 (11%), Positives = 119/435 (27%), Gaps = 15/435 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + ++ + +L Q +S+G R+ AD+ + + S
Sbjct: 3 ISTIQAFNNSVSGISRNYADLTRTQAEISAGKRLLTPADDPVGAVRLLQLNQEQALNSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
I + + + ++ V+ I+ +D ++ +E+ Q + +L
Sbjct: 63 KSGITAAKNSLQQEETILNSVGTVIHRIREIAVQAGNGGLDASDKNALATELAQREDELL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++ +G+ G + + D G+ ++ +
Sbjct: 123 NLLNSRDASGKYLFSGSQGDTQPFVRNPDGTYSYNGDEGQREVQIASSTFIAISDNGKIL 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + D S+ T + +S L +
Sbjct: 183 FESGSNANRVSTGKGAAGLDASGNPSDSSISLGLVTDKEAYDTVFPSSTPPLASDGVGIH 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ L P + ++ S + AS + ++
Sbjct: 243 FTDAKNYVVYDLKTIPPGYDWSTSDPNPPSFATLASGKIDDNAQTSDFITFGGVKVQIDG 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T + + T+ + + + + A
Sbjct: 303 EPQGGDTFSIKRQPDQEKRSLLNTVSDLRKALLSAEDTPAGNLAI------------RDA 350
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ +S +D+ G+IG+ + E FI + + ++ D D +
Sbjct: 351 VGVAISNLDSSNSQILTGQGRIGARMNVAESTETFIDDVTLVNTAVISQIQDLDYPEALS 410
Query: 421 RLSALQTQQQLAVQA 435
RL+ T A Q+
Sbjct: 411 RLTLQSTIMDAAQQS 425
>gi|116049016|ref|YP_792182.1| flagellar hook-associated protein FlgL [Pseudomonas aeruginosa
UCBPP-PA14]
gi|296390549|ref|ZP_06880024.1| flagellar hook-associated protein FlgL [Pseudomonas aeruginosa
PAb1]
gi|115584237|gb|ABJ10252.1| flagellar hook-associated protein type 3 FlgL [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 439
Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats.
Identities = 49/435 (11%), Positives = 119/435 (27%), Gaps = 15/435 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + ++ + +L Q +S+G R+ AD+ + + S
Sbjct: 3 ISTIQAFNNSVSGISRNYADLTRTQAEISAGKRLLTPADDPVGAVRLLQLNQEQALNSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
I + + + ++ V+ I+ +D ++ +E+ Q + +L
Sbjct: 63 KSGITAAKNSLQQEETILNSVGTVIHRIREIAVQAGNGGLDASDKNALATELAQREDELL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++ +G+ G + + D G+ ++ +
Sbjct: 123 NLLNSRDASGKYLFSGSQGDTQPFVRNPDGTYSYNGDEGQREVQIASSTFIAISDNGKIL 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + D S+ T + +S L +
Sbjct: 183 FESGSNANRVSTGKDAAGLDASGNPSDSSISLGLVTDKEAYDTVFPSSTPPLASDGVGIH 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ L P + ++ S + AS + ++
Sbjct: 243 FTDAKNYVVYDLKTIPPGYDWSTSDPNPPSFATLASGKIDDNAQTSDFITFGGVKVQIDG 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T + + T+ + + + + A
Sbjct: 303 EPQGGDTFSIKRQPDQEKRSLLNTVSDLRKALLSAEDTPAGNLAI------------RDA 350
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ +S +D+ G+IG+ + E FI + + ++ D D +
Sbjct: 351 VGVAISNLDSSNSQILTGQGRIGARMNVAESTETFIDDVTLVNTAVISQIQDLDYPEALS 410
Query: 421 RLSALQTQQQLAVQA 435
RL+ T A Q+
Sbjct: 411 RLTLQSTIMDAAQQS 425
>gi|30059892|gb|AAP13318.1| FliC [Escherichia coli]
Length = 579
Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats.
Identities = 50/352 (14%), Positives = 101/352 (28%), Gaps = 3/352 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + + + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLSGFNVNGSGAVAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + V + T + LA + AN
Sbjct: 184 TAATKSDLAAAQLLAPGTADANGTVTYTVGAGLKTSTAADVIASLANNAKVNATIANGFG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
T + +GT+ S S + + ++
Sbjct: 244 SPTATDYTYNSATGDFTYSATIAAGTNSGDSNSAQLQSFLTPKAGDTANLNVKIGSTSID 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
++ + + ++D + + K + T +
Sbjct: 304 VVLASDGKITAKDGSELFIDVDGNLTQNNAGTVKAATLDALTKNWHTTGTPS 355
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/235 (14%), Positives = 66/235 (28%)
Query: 218 STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASA 277
+ T S A N +S + +
Sbjct: 345 TKNWHTTGTPSAVSTVITTEDETTFTLAGGTDATTSGAITVANARMSAESLQSATKSTGF 404
Query: 278 TYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
T + + T++TT + +
Sbjct: 405 TVDVGATGTSAGDIKVDSKGIVQQHTGTGFEDAYTKADGSLTTDNTTNLFLQKDGTVTNG 464
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
V ++ + TDA + + + +D I +G++ +R+ +
Sbjct: 465 SGKAVYVSADGNFTTDAETKAATTADPLKALDEAISSIDKFRSSLGAVQNRLDSAVTNLN 524
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 525 NTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 579
>gi|218684449|gb|ACL01077.1| flagellin [Pseudomonas putida]
Length = 598
Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 70/205 (34%), Gaps = 3/205 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++MS + L L R+SSGL+++ A D+AA I+ + + LS
Sbjct: 3 LTVNTNITSMSVQKNLNKSPDALGTTMGRLSSGLKINSAKDDAAGLQISNRLTTQIKGLS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S A+ M+ + ++M ++ D S+Q E T L +
Sbjct: 63 VAVKNASDGISIAQTAEGAMATSGNIMQRMRELALQSANGSNSDDDRASMQQEFTALSGE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA ++F G N L S+ + + S Y +
Sbjct: 123 LTRIANTTTFGGRNLLDGTFSGSSFQVGANSNESISFGMKDVSATAMKGNYNEASVAGGV 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVL 203
++ +
Sbjct: 183 ATLQASVTGAAGKFGTNNAGSTSAS 207
>gi|220917714|ref|YP_002493018.1| flagellin domain protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955568|gb|ACL65952.1| flagellin domain protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 279
Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN ++++A + L LE R+SSG R++ A D+AA +I+ +++ + +
Sbjct: 3 LSIRTNIASLNAQRNLSTTQTALESSMSRLSSGYRITRAGDDAAGLAISTKLEAQIRSYN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQ 118
+ G S + +A +++ +V+S ++ G T+ +Q+E QL+++
Sbjct: 63 QAARNANDGLSVIQTTEAALNETSNVLSRLRELAMQAASDGIGDTERGYVQAEADQLRAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIA 146
+ IA + ++G L + +
Sbjct: 123 IDRIAAVTKYDGTPLLDGTGTALGFQVG 150
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 44/98 (44%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +S +D ++ + + +G++ +R I+ +A+ R+ DAD
Sbjct: 182 FTTATGARDALSTLDAAMETISRSRADLGAVGNRFQSTIANIQSFAEALSAANSRIRDAD 241
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+A E++RL+ QQ V L+ N + L L G
Sbjct: 242 VAEETSRLARANILQQAGVAVLAQANQTPQLALKLLGG 279
>gi|170760028|ref|YP_001788047.1| flagellin [Clostridium botulinum A3 str. Loch Maree]
gi|169407017|gb|ACA55428.1| flagellin [Clostridium botulinum A3 str. Loch Maree]
Length = 279
Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats.
Identities = 36/252 (14%), Positives = 88/252 (34%), Gaps = 3/252 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D ++ E+ +LQ ++
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVGVDKSNLDKEVKELQKEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN +N L D+ + + + + + + T + S
Sbjct: 123 RISSQTQFNTKNLLNGDVTGAGKELTFQIGANSGQTITLSIGTMNSKTLGVGATTVTIGS 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + + ++ D
Sbjct: 183 DKTASDITKMIATIDTAINKVSGERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVD 242
Query: 241 QAKGIATIPVPL 252
AK +
Sbjct: 243 MAKEMMNFTKTN 254
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 40/105 (38%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ + +M++ IDT I + K+G+ +R+ + + ++
Sbjct: 175 ATTVTIGSDKTASDITKMIATIDTAINKVSGERAKLGANQNRLEHTIANLDNSAENLQAA 234
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D DMA E + Q A L+ N + +L L R
Sbjct: 235 ESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQANQAPQGVLQLLR 279
>gi|45657752|ref|YP_001838.1| flagellin protein [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|73919363|sp|Q72R59|FLAB_LEPIC RecName: Full=Flagellar filament 35 kDa core protein; AltName:
Full=Flagellin class B
gi|45600992|gb|AAS70475.1| flagellin protein [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
Length = 283
Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats.
Identities = 32/255 (12%), Positives = 80/255 (31%), Gaps = 3/255 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + L+ ++ +SSG+R++ AAD+A+ ++++ +++ L
Sbjct: 3 INHNLSAVNAHRSLKFNELAVDKTMKALSSGMRINSAADDASGLAVSEKLRTQVNGLRQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + A+ + + +++ I+ D + +Q E++ L ++
Sbjct: 63 ERNTEDGMSFIQTAEGFLEQTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + + ++ + I T+
Sbjct: 123 RIASQAEFNKFKLFEGQFARGSRVASMWFHMGPNQNQRERFYIGTMTSKALKLVKADGRP 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ D + + + L + + D
Sbjct: 183 IAISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRD 242
Query: 241 QAKGIATIPVPLPAA 255
+ +
Sbjct: 243 ADMAEEVVSLTTKQI 257
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ D + +G+ +R+ + + ++ R+ DAD
Sbjct: 185 ISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDAD 244
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E L+ Q Q L+ N +L L +
Sbjct: 245 MAEEVVSLTTKQILVQSGTAMLAQANMKPNSVLKLLQ 281
>gi|170760635|ref|YP_001785573.1| flagellin protein [Clostridium botulinum A3 str. Loch Maree]
gi|169407624|gb|ACA56035.1| flagellin protein [Clostridium botulinum A3 str. Loch Maree]
Length = 283
Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM A + + +R++SG+R++ A+D+ A +I++ M++ L
Sbjct: 3 INHNVNAMIAYRNIMINGALAGKAMERLASGMRINRASDDPAGLAISEKMRAQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + G S + +A+ G+ + ++ ++ D K+IQ EI QL +
Sbjct: 63 SRNVQDGISMIQVAEGGVKEIQSMLQRMRELAVQAANGTNSPEDRKNIQDEINQLTKGID 122
Query: 121 DIARGSSFNGENWLRTDL 138
DIA G+ FN L +
Sbjct: 123 DIANGTEFNTIKLLNANA 140
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + D I ++ +G+ S+ + + ++++ + + R+ DAD
Sbjct: 183 VSTSEKASAAIKVFDDAINKTSSFMSSLGASSNMLEHRINYLENTIGNLTEAESRIRDAD 242
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + QQ+A S V + L +
Sbjct: 243 MAKEMMNYTKYSVLQQVAQAIFSQVLKQQESTIQLLK 279
>gi|312127304|ref|YP_003992178.1| flagellin domain-containing protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311777323|gb|ADQ06809.1| flagellin domain protein [Caldicellulosiruptor hydrothermalis 108]
Length = 272
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 37/256 (14%), Positives = 79/256 (30%), Gaps = 3/256 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++ +L N L +++SSG+R++ A D+AA +I++ M+ L+
Sbjct: 3 INNNVQALNTYNRLTINNDMLSKSLEKLSSGMRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ D +++Q+E+ QL ++
Sbjct: 63 IRNAQDGISLIQTAEGALNETHSILQRMRELAVQAANDTNTAEDRQALQAEVDQLVKEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + L SS+ S+
Sbjct: 123 RIANTTQFNTKTLLDGSYSSSSLVFQIGANKDQNIGLTIASAKAADLGVDTINITDQTSA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + +S + A + + A
Sbjct: 183 NQAISTIDGAIGKVSSIRAKLGAYQNRLEHTINNLGVSAENLTAAESRIRDVDMAKEMMA 242
Query: 241 QAKGIATIPVPLPAAP 256
K +
Sbjct: 243 YTKNNILMQAATAMLA 258
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 42/102 (41%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
+T ++ + + +S ID I ++ K+G+ +R+ + + + + + R
Sbjct: 171 VDTINITDQTSANQAISTIDGAIGKVSSIRAKLGAYQNRLEHTINNLGVSAENLTAAESR 230
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D DMA E + Q A L+ N +L L R
Sbjct: 231 IRDVDMAKEMMAYTKNNILMQAATAMLAQANQLPQAVLQLLR 272
>gi|157159035|ref|YP_001463228.1| flagellin [Escherichia coli E24377A]
gi|157081065|gb|ABV20773.1| flagellin FliC [Escherichia coli E24377A]
Length = 579
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 51/352 (14%), Positives = 100/352 (28%), Gaps = 3/352 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLSGFNVNGGGAVAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + VS + T + LA + AN
Sbjct: 184 TAATKSDLAAAQLLAPGTADANGTVTYTVSAGLKTSTAADVIASLANNAKVNATIANGFG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
T + +GT+ S S + + ++
Sbjct: 244 SPTATDYTYNSATGDFTYSATIAAGTNSGDSNSAQLQSFLTPKAGDTANLNVKIGSTSID 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
++ + + ++D + + K + T
Sbjct: 304 VVLASDGKITAKDGSELFIDVDGNLTQNNAGTVKAATLDALTKNWHTTGTPG 355
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/235 (13%), Positives = 67/235 (28%)
Query: 218 STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASA 277
+ T A N +S + +
Sbjct: 345 TKNWHTTGTPGAVSTVITTEDETTFTLAGGTNATTSGAITVANARMSAESLQSATKSTGF 404
Query: 278 TYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
T + + + T++TT + +
Sbjct: 405 TVDVGATGNSAGDIKVDSKGIVQQYTGTVFEDAYTKADGSLTTDNTTNLFLQKDGTVTNG 464
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
V ++ + TDA + +++ +D I +G++ +R+ +
Sbjct: 465 SGKAVYVSADGNFTTDAETKAATTADLLKALDEAISSIDKFRSSLGAVQNRLDSAVTNLN 524
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 525 NTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 579
>gi|114054921|gb|ABI50060.1| FlaA [Clostridium botulinum]
Length = 265
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 71/180 (39%), Gaps = 3/180 (1%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L S
Sbjct: 1 NHNLNAMNAXRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQAS 60
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
S + A+ +++ ++ ++ G D +I++EIT+L +++
Sbjct: 61 RNSQDSISLIQTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEINR 120
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I++ + FN + L I + + T + + +
Sbjct: 121 ISQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLTIGDMSAKTLGVSGVSVSDASKATDS 180
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 41/109 (37%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T + + ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 157 GDMSAKTLGVSGVSVSDASKATDSIATIDKALGTVSTERAKLGANQNRLEHTINNLNTSS 216
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
+ ++ R+ D DMA E S Q A L+ N + +L L
Sbjct: 217 ENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQL 265
>gi|261420577|ref|YP_003254259.1| flagellin [Geobacillus sp. Y412MC61]
gi|319768247|ref|YP_004133748.1| flagellin domain protein [Geobacillus sp. Y412MC52]
gi|261377034|gb|ACX79777.1| flagellin domain protein [Geobacillus sp. Y412MC61]
gi|317113113|gb|ADU95605.1| flagellin domain protein [Geobacillus sp. Y412MC52]
Length = 327
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 94/300 (31%), Gaps = 3/300 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++L N +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTYRQLTTNTTNASKSIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLEQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ T D + +Q E QL S++
Sbjct: 63 SRNAQDGISLIQTAEGALNEVHSILQRMRELATQAANSTNTQADREQLQKEFNQLTSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN + L ++ ++ + + + + L T +S
Sbjct: 123 RIGNTTEFNTQKLLNGNVSGASPIKLQIGANTNQSFEIKIFDMRAQALGLAGTTAGSKAS 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + +S + A A
Sbjct: 183 GLGAATTSNGTSVSNELKVGISNATFTSGTTNQLTDVSNASTPEYALNIMSFSGATAAIS 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ A + + + + A + T D+ + +
Sbjct: 243 KIDIAINTVSTERARLGSYQNRLEHTINNLDTSAENLTAAESRIRDVDMAKEMMEFTKQN 302
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 40/137 (29%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + + + N + +S ID I
Sbjct: 191 NGTSVSNELKVGISNATFTSGTTNQLTDVSNASTPEYALNIMSFSGATAAISKIDIAINT 250
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ ++GS +R+ + + + + R+ D DMA E + Q A
Sbjct: 251 VSTERARLGSYQNRLEHTINNLDTSAENLTAAESRIRDVDMAKEMMEFTKQNILTQAAQS 310
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +L L R
Sbjct: 311 MLAQANQQPQSVLQLLR 327
>gi|114054897|gb|ABI50048.1| FlaA [Clostridium botulinum]
Length = 268
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 74/194 (38%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 1 INHNLNAMNAXRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ ++ ++ ++ G D +I++EIT+L +++
Sbjct: 61 SRNSQDSISLIQTAEGAXTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEIN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L I + + T + +
Sbjct: 121 RISQQTEFNTQKLLSGGFXDKNFQIGANKAQTIKLXIGDMSAKTLGVSGVSVSDAXXATD 180
Query: 181 TDGTERYGLLDRNH 194
+ T L +
Sbjct: 181 SIATIDTALGTVST 194
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 42/111 (37%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T + + ++ + ++ IDT + + K+G+ +R+ + +
Sbjct: 158 GDMSAKTLGVSGVSVSDAXXATDSIATIDTALGTVSTERAKLGANQNRLEHTINNLNTSS 217
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ DMA E S Q A L+ N + +L L R
Sbjct: 218 ENLQAAESRVRXVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLLR 268
>gi|78044274|ref|YP_359828.1| flagellin [Carboxydothermus hydrogenoformans Z-2901]
gi|77996389|gb|ABB15288.1| flagellin [Carboxydothermus hydrogenoformans Z-2901]
Length = 275
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++A + L + L+ +++SSGLR++ A D+AA +I++ +++ L+
Sbjct: 5 INNNIEALNAWRALNSTSNALQKSMEKLSSGLRINRAGDDAAGLAISEKLRAQIRGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
G S + A+ G+S+ +++ ++ D +I +E+ QL +++
Sbjct: 65 IRNAQDGISLIQTAEGGLSEIQNILQRMRELGVQAANGTLNNQDISAITTELNQLFNEID 124
Query: 121 DIARGSSFNGENWLRTDLG 139
IA + FN +N L G
Sbjct: 125 RIAGATEFNTKNLLAVSTG 143
Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 43/97 (44%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
N+ + +S +D+ ++ + +GSI +R+ + + + + R+ D D
Sbjct: 179 INDNASASAFISKVDSALQKVSTYRANLGSIQNRLEHTIANLGIASENLSASESRIRDVD 238
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA+E + Q QQ V L+ N + +L L R
Sbjct: 239 MAAEMMNFTKNQILQQAGVAILAQANQAPQAVLQLLR 275
>gi|238920297|ref|YP_002933812.1| flagellin [Edwardsiella ictaluri 93-146]
gi|182342507|gb|ACB87392.1| flagellin 2 [Edwardsiella ictaluri]
gi|238869866|gb|ACR69577.1| flagellin [Edwardsiella ictaluri 93-146]
Length = 347
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 3/153 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN ++ A L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 3 LVINTNILSLEAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANINGLT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQ 118
S G S + +++ D + I+ SIQ EITQ +
Sbjct: 63 QASRNANDGISLAQTTEGALNEVNDNLQNIRRLAVQAQNGTNSESDLQSIQDEITQRLDE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
+ I+ + FNG L D + A
Sbjct: 123 INRISAQTDFNGVKVLSKDQSLTIQVGADDGQT 155
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 29/203 (14%), Positives = 60/203 (29%)
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
+ + A + +S + + G + + G +
Sbjct: 145 TIQVGADDGQTIGINLRKMDAGTLGLSSFSVMTKGTRVGDAVSVGTMVTPTAGGKMVAVK 204
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
A T + + S + I + ++ ++ +
Sbjct: 205 APAAGTLVSGTSAAGQAGYYIKNTDAKTGVVSYTSATIGADGSVAVGKPVTDLQTPLATL 264
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + +G++ +R + + R+ DAD A+E + +S Q
Sbjct: 265 DKALSQVDDLRSGLGAVQNRFDSVISNLDSTVTNLSASRSRIQDADYATEVSDMSRAQIL 324
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N ST +LSL R
Sbjct: 325 QQAGTAVLAKANQSTQNVLSLLR 347
>gi|298530884|ref|ZP_07018286.1| flagellin domain protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298510258|gb|EFI34162.1| flagellin domain protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 803
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 4/143 (2%)
Query: 1 MT-SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M+ +I N AM+A + L +L R+SSGLRV AAD+AA ++ ++M++D A
Sbjct: 1 MSLTINHNPMAMNAQRNLESHYGDLATSTRRLSSGLRVDTAADDAAGLAVRELMRADIAA 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQ 116
++ G S + A + + + +K I E Q++
Sbjct: 61 MNQGVRNANDGISAIQTADGSLEVIDNKLIRMKELAEQAATGTYTQEQRDVIDGEFQQMK 120
Query: 117 SQLRDIARGSSFNGENWLRTDLG 139
+++ IA + FN + + +L
Sbjct: 121 AEINRIANQTEFNQQKLINGNLS 143
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/368 (9%), Positives = 88/368 (23%), Gaps = 12/368 (3%)
Query: 91 IKNKITAGVERGTDSKSIQS-EITQLQSQLRDIARGSSFNG--------ENWLRTDLGSS 141
++ + S S E Q+ + +++ F +
Sbjct: 437 MRALTQQINDETDLEASYSSSEDGQITIEGENVSNAIDFYHSQSLVYEERTIENLTNEIN 496
Query: 142 TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
+ I ++ + D D L+D+ + D +
Sbjct: 497 PDASGNETFHININGESFTYTTESGDTDEDVIEGLVDAINESETYTASYDSDDDEMTIQG 556
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
+S ++ + ++ A +
Sbjct: 557 AATSDIAVYELSSDEVTYTVDSGESGENTVEITDGPLWEGAVYALDVGSGSVDNLERYEY 616
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
T + A A I + + + + +
Sbjct: 617 TVQDGDDYEDIMRALAEQISVDDHIDDAYFDEDEGVIVLQDSNIESGETWAELQASDRLD 676
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ + + + L + + ID I+
Sbjct: 677 GDIEINNPSATLVDPNLQEDAEEFDN---HINEVKPTLYAQNALEEIDAAIEIKDRIRAD 733
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G+ +R+ +++ + ++ R+ D D+A E T+ + Q Q A L+ N
Sbjct: 734 LGAYQNRLDNTVSNLQIQAENLQAAESRISDVDVAHEMTQFTRNQVLSQGATAMLAQANT 793
Query: 442 STARILSL 449
+ L
Sbjct: 794 LPQMAMQL 801
>gi|322804511|emb|CBZ02062.1| flagellin protein FlaA [Clostridium botulinum H04402 065]
Length = 283
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 75/174 (43%), Gaps = 3/174 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM A + + +R++SG+R++ A+D+ A +I++ M++ L
Sbjct: 3 INHNVNAMIAYRNIMINGALAGKAMERLASGMRINRASDDPAGLAISEKMRAQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + G S + +A+ G+ + ++ ++ D K+IQ EI QL +
Sbjct: 63 SRNVQDGISMIQVAEGGVKEIQSMLQRMRELAVQAANGTNSPEDRKNIQDEIDQLTRGID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
DIA+G+ FN L ++ + + + + ++ +T
Sbjct: 123 DIAKGTEFNTIKLLNANVTDAGEVKLQIGANEGQFFGVKLQNMNSAALGINGDT 176
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 44/117 (37%)
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + +N + + + D I A++ +G+ S+ + + +
Sbjct: 163 QNMNSAALGINGDTDKDGVDVSTSEKASAAIKVFDDAINKASSFMSSLGASSNMLEHRIN 222
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+++ + + R+ DADMA + + QQ+A S V + L +
Sbjct: 223 YLENTIGNLTEAESRIRDADMAKKMMNYTKYSVLQQVAQAIFSQVLKQQESTIQLLK 279
>gi|323340178|ref|ZP_08080442.1| flagellin family protein [Lactobacillus ruminis ATCC 25644]
gi|323092369|gb|EFZ34977.1| flagellin family protein [Lactobacillus ruminis ATCC 25644]
Length = 393
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 56/169 (33%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN AM A N R+SSG R++ AD+ A IA M L
Sbjct: 44 INTNVDAMRAYSNYATWNAAKSKSLLRISSGKRINSFADDPAGACIAVKMGVQVSGLKVA 103
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ +++ D +I E L+ ++
Sbjct: 104 KRNAQDGISLIQTAEGALNETHSILGRMRDLAVQAANGTLTYEDRAAIDKEFQALRQEID 163
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I S FN N L T + + + + +
Sbjct: 164 RIGNSSQFNTINLLDGSRNKITLQVGANAGQTMDVELSDMRFDAIFKTT 212
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 35/87 (40%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+++ +D I + +G+ + + ++++ + R+ D D+A E +
Sbjct: 298 VMNQVDKAISTVSLQRAGLGATQNALQHTINYLENSAINLSDAQSRIEDCDIAEEMMNFT 357
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLF 450
Q+A L+ N+ +L L
Sbjct: 358 KANLMSQVAAAMLAQANSEPNTVLMLL 384
>gi|220934401|ref|YP_002513300.1| flagellar hook-associated protein 3 [Thioalkalivibrio sp. HL-EbGR7]
gi|219995711|gb|ACL72313.1| flagellar hook-associated protein 3 [Thioalkalivibrio sp. HL-EbGR7]
Length = 400
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 40/422 (9%), Positives = 107/422 (25%), Gaps = 53/422 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + ++D L Q ++ +G R+ +D+ + A +S
Sbjct: 3 VSTTQIFRNGIGAIQDNQQGLARTQLQLGTGKRILSPSDDPSGAVQALQFRSSVEKTEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ ++ +++ ++ + + ++ G + I EI Q+ +L
Sbjct: 63 QRNGNIVEQRLRLSETILTSVGEGLQRVRELAVQGNNGSQTNETRRYIAGEIRQILDELV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++ NGE + + F D+G+ ++ +
Sbjct: 123 QLSNTRDANGEYIYAGLTSLTQPFSPGAGGEVFYNGDDGQRRLQISPVRQLAIGDSGQAV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
SV D + +
Sbjct: 183 FMDIPTGNGTFVVRDDPGNTGGGVIDAGSVIDFNAWQADTY------------------- 223
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ S + + S + + + +
Sbjct: 224 -----------------------------TISFSEVGGELFYEVSGGGLPPVSTPFVEGE 254
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
++ T D+ + + +DL + +T + N +
Sbjct: 255 AIRFAGIETRIQGTPADGDSFTLSPSENQDLFATYRQLAEALEAPVTDTPSRARLNNAVN 314
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ +D + +GS + Q + + + + + + D D A +
Sbjct: 315 R--ALVNLDQALGNILDTRASVGSRLKTVENQRNINEDVLLQLRTTLSEIEDLDYAEAIS 372
Query: 421 RL 422
R
Sbjct: 373 RF 374
>gi|189164099|gb|ABU96038.2| flagellin [Bacillus thuringiensis serovar kenyae]
gi|189339456|gb|ABD33724.2| flagellin [Bacillus thuringiensis serovar kenyae]
Length = 400
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M+S G L+
Sbjct: 36 INTNINSMRTQEYMRQNQAKMSNSMDRLSSGKRINNASDDAAGLAIATRMRSREGGLNVA 95
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S + A + ++ +++ +++ + ++Q E QL+ Q++
Sbjct: 96 ARNTEDGMSLIRTADSALNSVSNILLRMRDLANQSASGTNTDKNQAAMQKEFDQLKEQIQ 155
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGS 152
IA + FN + L + S +
Sbjct: 156 YIADNTEFNDKKLLDGSNSTINIQTLDSHDKN 187
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/308 (9%), Positives = 85/308 (27%)
Query: 144 SIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
++A + + L + + + + +
Sbjct: 93 NVAARNTEDGMSLIRTADSALNSVSNILLRMRDLANQSASGTNTDKNQAAMQKEFDQLKE 152
Query: 204 KDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTS 263
+ ++ +T + L + + + + + ++
Sbjct: 153 QIQYIADNTEFNDKKLLDGSNSTINIQTLDSHDKNKQITISLDSASLKNLDIKDLAIGSA 212
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
+ + + S + +D V A + S ++
Sbjct: 213 TINQTDLDTATNSMKRLATPATDGKVLAQDIADAKAAFNKVQSAYTPAEVDKIQDAFKAY 272
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+ K+ D + +N K V ID I+ ++ +G
Sbjct: 273 DKLAADPASKDTDIADAAKNVNTVFGTLATPTATKFDPSSAVEKIDKAIETIASSRATLG 332
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
+ +R+ +K +++ ++ DADMA E + ++ + + + LS N +
Sbjct: 333 ATLNRLDFNVTNLKSQENSMAASASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTP 392
Query: 444 ARILSLFR 451
+ L +
Sbjct: 393 QMVSKLLQ 400
>gi|170754353|ref|YP_001779875.1| flagellin protein [Clostridium botulinum B1 str. Okra]
gi|169119565|gb|ACA43401.1| flagellin protein [Clostridium botulinum B1 str. Okra]
Length = 283
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 72/178 (40%), Gaps = 3/178 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM A + + +R++SG+R++ A+D+ A +I++ M++ L
Sbjct: 3 INHNVNAMIAYRNIMINGALAGKAMERLASGMRINRASDDPAGLAISEKMRAQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + G S + +A+ G+ + ++ ++ D K+IQ EI QL +
Sbjct: 63 SRNVQDGISMIQVAEGGVKEIQSMLQRMRELAVQAANGTNSPEDRKNIQDEIDQLTRGID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
DIA G+ FN L + + + + + ++ T
Sbjct: 123 DIANGTEFNTIKLLNANAADAGEVKLQIGANEGQFFGVKLQNMNSEALGINGNTNKYG 180
Score = 83.6 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 42/117 (35%)
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + +N + + + D I A++ G+ S+ + + +
Sbjct: 163 QNMNSEALGINGNTNKYGVDVSTAEKESAAIKVFDDAINKASSFMSSPGASSNMLEHRIN 222
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+++ + + R+ DADMA E + QQ+A S V + L +
Sbjct: 223 YLENTIGNLTEAESRIRDADMAKEMMNYTKYSVLQQVAQAIFSQVLKQQESTIQLLK 279
>gi|12697206|emb|CAC28252.1| flagellin [Escherichia coli]
gi|30059900|gb|AAP13322.1| FliC [Escherichia coli]
Length = 570
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 71/220 (32%), Gaps = 3/220 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + + +D+
Sbjct: 124 DRVSGQTQFNGVNVLSKDGSMKIQVGANDGETITIDLKKIDSSTLKLTSFNVNGKGAVDN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
+ + V + T +
Sbjct: 184 AKATEADLTAAGFSQSAVVSGNSTWTKSTVTTFNAATATD 223
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/319 (12%), Positives = 89/319 (27%)
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
+ S + S + + + + Y S G+ + + +
Sbjct: 252 YTYNATSKSYSFDATALTNGDGTAGSTKVADVLKAYAANGDNTAQISIGGSAQEVKIASD 311
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
+ I +A + + + V
Sbjct: 312 GTLTDTNGDALYIGADGNLTKNQAGGPAAATLDGIFNGANGHDAVDAKITFGSGMTVDFT 371
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+ T ++ + A + + N ++T+ G + G
Sbjct: 372 QVSNNVDIKGATVSAEDMNTALTGQAYTVANGAQSYDVAADGAVTATTGGATVNIGAEGE 431
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ T +D + + T+A + A + + +D I
Sbjct: 432 LTTAANKTVTETYHEFANGNILDDDGAALYKAADGSLTTEATGKSEATTDPLKALDDAIA 491
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 492 SVDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGN 551
Query: 434 QALSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 552 SVLAKANQVPQQVLSLLQG 570
>gi|114054925|gb|ABI50062.1| FlaA [Clostridium botulinum]
gi|114054927|gb|ABI50063.1| FlaA [Clostridium botulinum]
Length = 265
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 71/179 (39%), Gaps = 3/179 (1%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L S
Sbjct: 1 HNLNAMNAHRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQASR 60
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDI 122
S + A+ +++ ++ ++ G D +I++EIT+L +++ I
Sbjct: 61 NSQDSISLIQTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEINRI 120
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
++ + FN + L I + + T + + +
Sbjct: 121 SQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLTIGDMSAKTLGVSGVSVSDASKATDS 179
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 41/112 (36%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 154 TIGDMSAKTLGVSGVSVSDASKATDSIATIDKALGTVSTERAKLGANQNRLEHTINNLNT 213
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ ++ R+ D DMA E S Q A L+ N + +L L
Sbjct: 214 SSENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLL 265
>gi|226326177|ref|ZP_03801695.1| hypothetical protein PROPEN_00019 [Proteus penneri ATCC 35198]
gi|225205423|gb|EEG87777.1| hypothetical protein PROPEN_00019 [Proteus penneri ATCC 35198]
Length = 285
Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 41/94 (43%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+A E+ +S +D + +G++ +R+ + + + R+ DAD A+
Sbjct: 192 DIANEQPLSTLDKLFSKVDSLRSAMGAVQNRLDSTIANLGNTVNNLTASRSRIEDADYAT 251
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + +S Q QQ L+ N +LSL R
Sbjct: 252 EVSNMSKGQILQQAGTSVLAQANQMPQNVLSLLR 285
>gi|189339429|gb|ABD33702.2| flagellin [Bacillus thuringiensis serovar canadensis]
Length = 397
Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 36 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 95
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + M+ +++ +++ + ++ E L+ Q+
Sbjct: 96 ANNTQDGISLIRTADSAMNSVSNILLRMRDLANQSANGTNTNENQAALNKEFDALKEQID 155
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
I+ + FN + L +
Sbjct: 156 YISTNTEFNDKKLLDGSNKTIAVQT 180
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 51/150 (34%)
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
V + E+ D K + + + + K
Sbjct: 248 MKEFDKVKPFMSADDVKKIETKLEDYNKANDAGAQTAAQALGKEFATLTKLETTDLKANA 307
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ IDT +K + +G+ +R+ + +K ++ ++ DADMA E +
Sbjct: 308 SGAIASIDTALKNIASNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSE 367
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + + + LS N + + L +
Sbjct: 368 MTKFKILNEAGISMLSQANQTPQMVSKLLQ 397
>gi|12657818|gb|AAK01040.1|AF320637_1 endoflagellar core protein [Leptospira biflexa serovar Patoc]
Length = 282
Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 72/172 (41%), Gaps = 3/172 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ A + L+ + NL +++SSG+R++ A D+A+ ++++ M++ L
Sbjct: 3 INHNVSAIFAHRTLKSNDANLSKDIEKLSSGMRINKAGDDASGLAVSEKMRAQIAGLRRA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + A+ + + +++ ++ D + IQ E++QL ++
Sbjct: 63 EQNTEDGMSLIQTAEGYLQETHEIVQRVRVLAVQAANGIYSEEDRQQIQVEVSQLVDEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
IA + FN L + + +V I T++
Sbjct: 123 RIASQAEFNKMKLLTGAFARLNPTASMWFHIGANMHQRERVYIETMNTAALG 174
Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 40/115 (34%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + L + + ++ D ++ + +G+ +R+ +
Sbjct: 168 MNTAALGLRNPTVLTFISLSTAGKANSVIGLCDDALRVISKQRADLGAYYNRMEHAAKGL 227
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R+ D DMA + T + Q Q A L+ N + ++ L +
Sbjct: 228 MNAYENTQASESRIRDTDMAEQMTSFTRYQILTQAATSMLAQANMKSQSVMRLLQ 282
>gi|239828334|ref|YP_002950958.1| flagellin [Geobacillus sp. WCH70]
gi|239808627|gb|ACS25692.1| flagellin domain protein [Geobacillus sp. WCH70]
Length = 339
Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 87/273 (31%), Gaps = 3/273 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++L +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTYRQLTIGQNAATKNMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLEQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ GTD IQ EI QL S++
Sbjct: 63 SRNAQDGISLIQTAEGALNEVHSILQRMRELAVQAANDTNTGTDRDEIQKEINQLTSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN + L ++ S + D +
Sbjct: 123 RIGNTTEFNTQKLLNGTRTTTPLSTPAGATQNGGNDPQSAGATQNGGNDPQSAGATQNGG 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D + + + + S + I+ + + S
Sbjct: 183 NDPQSAGATQNGGNDPQSAGATQNGGNDSQSAGTIEITLQIGANQSQSLTIDIQDMRARA 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
A + T+ + + V
Sbjct: 243 LGITGTAGTSGFTATNTVTDGTNNDTVEAALDV 275
Score = 60.5 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/240 (7%), Positives = 55/240 (22%)
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+ T+ + + T+ +T +
Sbjct: 97 AANDTNTGTDRDEIQKEINQLTSEINRIGNTTEFNTQKLLNGTRTTTPLSTPAGATQNGG 156
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
A +A A N + + + + + + + +
Sbjct: 157 NDPQSAGATQNGGNDPQSAGATQNGGNDPQSAGATQNGGNDPQSAGATQNGGNDSQSAGT 216
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
I + + + + + + N +
Sbjct: 217 IEITLQIGANQSQSLTIDIQDMRARALGITGTAGTSGFTATNTVTDGTNNDTVEAALDVS 276
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ I I +A K+G+ +R+ + + + ++ R+ D D A
Sbjct: 277 NAANASAAITRIQIAIDRVSAERSKLGAYQNRLEHTINNLSTSAENLQAAESRIRDVDYA 336
>gi|90579918|ref|ZP_01235726.1| flagellin [Vibrio angustum S14]
gi|90438803|gb|EAS63986.1| flagellin [Vibrio angustum S14]
Length = 514
Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 60/409 (14%), Positives = 122/409 (29%), Gaps = 3/409 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I TN +AM+A + L + ++ ++SSGLR++ A D+AA I+ + + L+
Sbjct: 4 TINTNVTAMTAQRNLNSASSSVADSMQKLSSGLRINSAKDDAAGLQISNRLTNQTNGLNV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M ++ +M ++ D +++Q E+ QLQS++
Sbjct: 64 AMRNANDGVSMAQTAEGAMQESTTIMERMRELALQSANGSNSDKDREAMQKEMGQLQSEM 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G+N L GS + I + + Y + +
Sbjct: 124 NRIADTTSFGGQNLLDGSFGSKSFQIGANANETQELGLMDVSSHALGRDYKNLDAGPNAV 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G + I Q + D ++ +
Sbjct: 184 ELKNGSSTGNETFSLNINGNSQSVDITKDMTADDLQNKLNNIDGVSDIAVTETTRETTAA 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A N + S +A AT + +
Sbjct: 244 TAGTSTVSGLAMNGAETVDFNIGGQSISLASADLADQATLQAKLETVFDGSGNITLTANG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + A T + + +G + + T+ +
Sbjct: 304 SGDGFSISSADGSEVAIEATVAGTNAGTTATIAGADGTGTQALAGDATKTGTSITTGGVA 363
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
A+ E +D + I +++ + + A
Sbjct: 364 AVTEKAFSVDFSGMKVDTSVASIEYSTTKFDGTAETQAMNIGAATTTES 412
Score = 97.1 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 33/259 (12%), Positives = 69/259 (26%)
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
N V+ + +T + KL T G +
Sbjct: 255 MNGAETVDFNIGGQSISLASADLADQATLQAKLETVFDGSGNITLTANGSGDGFSISSAD 314
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+G+ + A T + D T+ + +
Sbjct: 315 GSEVAIEATVAGTNAGTTATIAGADGTGTQALAGDATKTGTSITTGGVAAVTEKAFSVDF 374
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
S + K ++ T + + + ++ +D
Sbjct: 375 SGMKVDTSVASIEYSTTKFDGTAETQAMNIGAATTTESVASLDLSTAEGAQNAINVLDAA 434
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
++ +IG+ +R++ + + + V R+ D D ASE+ ++ Q QQ
Sbjct: 435 MEQVDEKRAEIGAFQNRMNHTMSNLANINENVNASNSRIKDVDFASETINMTKGQILQQA 494
Query: 432 AVQALSIVNNSTARILSLF 450
L+ LSL
Sbjct: 495 GTSILAQAKQIPQAALSLL 513
>gi|302875231|ref|YP_003843864.1| flagellin domain-containing protein [Clostridium cellulovorans
743B]
gi|302578088|gb|ADL52100.1| flagellin domain protein [Clostridium cellulovorans 743B]
Length = 274
Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + N + +++SSGLR++ A D+AA SI++ M++ L+
Sbjct: 3 INHNLNAMNAQRNMSINNGSAAKSMEKLSSGLRINRAGDDAAGLSISEKMRAQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D +I+SEI L +++
Sbjct: 63 SRNAQDGISLIQTAEGALNETQSILQRMRELAVQAANDTNVAVDRSAIKSEIDTLTTEID 122
Query: 121 DIARGSSFNGENWLRTD 137
IA+ + FN +N L
Sbjct: 123 RIAKTTQFNEKNLLTGS 139
Score = 83.3 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ I++ IK + +G+ +R+ + + ++ R+ D D
Sbjct: 178 VASNGVATAAITSINSAIKTVSTQRSSLGANQNRLEHTIANLDNASENLQAAESRVRDVD 237
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + QQ A L+ N + +L L R
Sbjct: 238 MAKEMMSFTKNNILQQAAQAMLAQANQAPQNVLQLLR 274
>gi|138896693|ref|YP_001127146.1| flagellin protein FliB [Geobacillus thermodenitrificans NG80-2]
gi|134268206|gb|ABO68401.1| Flagellin protein FliB(S) [Geobacillus thermodenitrificans NG80-2]
Length = 342
Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 45/321 (14%), Positives = 100/321 (31%), Gaps = 3/321 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++L +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTYRQLTIGQGAAAKNMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLEQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ + +S +IQ EI QL++++
Sbjct: 63 SRNAQDAISLIQTAEGALNETHSMLQRMRELVVQANNGTNNSDDLQAIQDEINQLKTEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
D+A + FN + L G S + + + I Y ++
Sbjct: 123 DLANRTEFNTKKLLNGSFGVKLDSSSTATGLTNIPGAVDVSSAAKNTTYTITVDESDNTI 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + + + + + ST + N+
Sbjct: 183 TIDDGNNNSQTIAVADVKDVKGVLNFSSLGIKINLANSTDFTASNINGQTIVTNNNSQEL 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
G + T GT+ K + ++ + K
Sbjct: 243 IQIGANKDQTLALSFNDMRATALGTATVKVNDIDVTSGTQTFNERLDAIDEAIKQVSAER 302
Query: 301 PGYTNSTVAKVGNTHYYVDTE 321
+ + +
Sbjct: 303 SKMGAAQNRLEHTINNLGTSA 323
Score = 67.1 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/288 (13%), Positives = 84/288 (29%)
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
+ S A A S+I + N + L + +++D +
Sbjct: 52 MRGQIRGLEQASRNAQDAISLIQTAEGALNETHSMLQRMRELVVQANNGTNNSDDLQAIQ 111
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
K ++ + + +G+ K +T +G A T
Sbjct: 112 DEINQLKTEITDLANRTEFNTKKLLNGSFGVKLDSSSTATGLTNIPGAVDVSSAAKNTTY 171
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
+ + + G + S++ +VA + N + T +
Sbjct: 172 TITVDESDNTITIDDGNNNSQTIAVADVKDVKGVLNFSSLGIKINLANSTDFTASNINGQ 231
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
V N + + + D + + + + D + E + I
Sbjct: 232 TIVTNNNSQELIQIGANKDQTLALSFNDMRATALGTATVKVNDIDVTSGTQTFNERLDAI 291
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
D IK +A K+G+ +R+ + + + + R+ D D A
Sbjct: 292 DEAIKQVSAERSKMGAAQNRLEHTINNLGTSAENLTAAESRIRDVDYA 339
>gi|170791519|gb|ACB38401.1| flagellin A [Aeromonas bestiarum]
Length = 303
Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 3/192 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + N +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNLMNTNKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E QL +++
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYDQLMTEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A ++F G+N L+ S A + R V +S
Sbjct: 125 RVAGDTTFGGQNLLKGGYVGSFQVGADAGQTITFRMTTAFTISGMASATSGSAAVTTTTS 184
Query: 181 TDGTERYGLLDR 192
+
Sbjct: 185 GEPYLVTKTAGT 196
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 67/239 (28%)
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + T GA + + +
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYDQLMTEID 124
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ G + + + +D G T + T + + ++ +
Sbjct: 125 RVAGDTTFGGQNLLKGGYVGSFQVGADAGQTITFRMTTAFTISGMASATSGSAAVTTTTS 184
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + + + ++ +D IK + ++G++ +R
Sbjct: 185 GEPYLVTKTAGTPVSSTSMSSIAAASSAQSAMANLDYMIKVVDSKRAELGAVQNRFDSTI 244
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + V R+ DAD A E+ L+ QQ A LS N LSL +G
Sbjct: 245 RNQANVSENVSAARSRIRDADFAIETANLTKQNILQQAASTILSQANQRPQSALSLLQG 303
>gi|16901500|gb|AAL30168.1|AF345851_1 flagellin [Escherichia coli]
Length = 564
Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 54/358 (15%), Positives = 101/358 (28%), Gaps = 3/358 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
N V + + + +A + + A+
Sbjct: 184 KAATISDLAATGANVTNSSNIVVTTKFNALDAATAFSKLKDGDSVAVAAQKYTYNASTND 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A +G S S + + A + S K +
Sbjct: 244 FTTENTVATGTATTDLGATLKAAAGQSQSGTYTFANGKVNFDVDASGNITIGGEKAFLVG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
TN T + + D+ + Y N T +
Sbjct: 304 GALTTNDPTGSTSATMSSLFKAADDKDAAQSSIDFGGKKYEFAGGNSTNGGGVKFKDT 361
Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats.
Identities = 48/387 (12%), Positives = 110/387 (28%), Gaps = 5/387 (1%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
S + A ++ + +++ T K + K S Q + +
Sbjct: 183 NKAATISDLAATGANVTNSSNIVVTTKFNALDAATAFSKLKDGDSVAVAAQKYTYNASTN 242
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+ + K+ G + +
Sbjct: 243 DFTTENTVATGTATTDLGATLKAAAGQSQSGTYTFANGKVNFDVDASGNITIGGE----- 297
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
+ L+ S++ A+ + + + A + +
Sbjct: 298 KAFLVGGALTTNDPTGSTSATMSSLFKAADDKDAAQSSIDFGGKKYEFAGGNSTNGGGVK 357
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
V A A S + K ++ + + A + + G
Sbjct: 358 FKDTVSSDALLAQVKADSTANNVKITFNNGPLSFTASFQNGVSGSAASNAAYIDSEGELT 417
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+T + N DT + ++ K + + + T+ + A ++ +
Sbjct: 418 TTESYNTNYSVDKDTGAVSVTGGSGTGKYAANVGAQAYVGADGKLTTNTTSTGSATKDPL 477
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ +D I +G+I +R+ + + + R+ DAD A+E + +S
Sbjct: 478 NALDEAIASIDKFRSSLGAIQNRLDSAVTNLNNTSTNLSEAQSRIQDADYATEVSNMSKA 537
Query: 426 QTQQQLAVQALSIVNNSTARILSLFRG 452
Q QQ L+ N ++LSL +G
Sbjct: 538 QIIQQAGNSVLAKANQVPQQVLSLLQG 564
>gi|116328029|ref|YP_797749.1| endoflagellar filament core protein [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116331518|ref|YP_801236.1| endoflagellar filament core protein [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|4091907|gb|AAC99336.1| flagellin [Leptospira borgpetersenii]
gi|116120773|gb|ABJ78816.1| Endoflagellar filament core protein [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116125207|gb|ABJ76478.1| Endoflagellar filament core protein [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 283
Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 31/255 (12%), Positives = 80/255 (31%), Gaps = 3/255 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+++ + L+ ++ +SSG+R++ AAD+A+ ++++ +++ L
Sbjct: 3 INHNLSAVNSHRSLKFNELAVDKTMKALSSGMRINSAADDASGLAVSEKLRTQINGLRQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + A+ + + +++ I+ D + +Q E++ L ++
Sbjct: 63 ERNTEDGMSFIQTAEGFLEQTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + + ++ + I T+
Sbjct: 123 RIASQAEFNKFKLFEGQFARGSRVASMWFHMGPNQNQRERFYIGTMTSKALKLVKADGRP 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ D + + + L + + D
Sbjct: 183 IAISSPGEANDVIGLADAALTRIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRD 242
Query: 241 QAKGIATIPVPLPAA 255
+ +
Sbjct: 243 ADMAEEVVSLTTKQI 257
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ D + +G+ +R+ + + ++ R+ DAD
Sbjct: 185 ISSPGEANDVIGLADAALTRIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDAD 244
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E L+ Q Q L+ N +L L +
Sbjct: 245 MAEEVVSLTTKQILVQSGTAMLAQANMKPNSVLKLLQ 281
>gi|300869853|ref|YP_003784724.1| flagellar protein FlaB2 [Brachyspira pilosicoli 95/1000]
gi|300687552|gb|ADK30223.1| flagellar protein, FlaB2 [Brachyspira pilosicoli 95/1000]
Length = 290
Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 77/205 (37%), Gaps = 3/205 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N SA++A + L+ +L ++SSG+R++ A D+A+ ++++ M++ L
Sbjct: 2 VINNNISAINAQRTLKFRQVDLRKDAAQISSGMRINQAGDDASGLAVSEKMRTQIRGLRQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
G S + + + + +++ I+ D +Q E++QL ++
Sbjct: 62 AERNTQDGISFIQTTEGYLEETTNILQRIRELAIQAANGIYTDEDRLYVQIEVSQLVDEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FN N L ST + N + ++ + + L +
Sbjct: 122 DRVASQAQFNKLNMLTGRFARSTGENTPTASMWLHIGANMDERKRVYIGTMNSQALGLKN 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLK 204
+ + K +
Sbjct: 182 PVGPATTATFISVSSPNKANTVIGM 206
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 19/162 (11%), Positives = 49/162 (30%)
Query: 290 RATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRH 349
+ N +T + + ++ + +
Sbjct: 129 QFNKLNMLTGRFARSTGENTPTASMWLHIGANMDERKRVYIGTMNSQALGLKNPVGPATT 188
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
A + + ++ +D + +G+ +R+ + + + + ++ R
Sbjct: 189 ATFISVSSPNKANTVIGMVDEALLKVLKQRADLGAYQNRLEMTAQGLMVGFENMQASESR 248
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D DMA S +L+ Q Q + L+ N L L +
Sbjct: 249 IRDTDMAEASVKLAKDQILNQANLSMLAQANQLPQGALRLLQ 290
>gi|121596099|ref|YP_987995.1| flagellin domain-containing protein [Acidovorax sp. JS42]
gi|120608179|gb|ABM43919.1| flagellin domain protein [Acidovorax sp. JS42]
Length = 279
Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 44/229 (19%), Positives = 86/229 (37%), Gaps = 3/229 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I TN S+++A + L +L R+SSGLRV+ A D+AA +IA+ M + ++
Sbjct: 3 STINTNISSLNAQRNLNTSQASLSTSMQRLSSGLRVNSAKDDAAGLAIAERMNTQVRGMN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ + K D + ++ D S+ E L S+
Sbjct: 63 VAIRNANDGVSLAQTAEGALGKVGDSLQRMRELAVQARNSTNSNDDKDSLDKEYQALASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ + G++FNG++ L D G+ T I + D + +
Sbjct: 123 ITRVLGGTTFNGKHILGADAGTLTFQIGANTTADDTIDVVTTNMKVDTTITAVTGGTIDN 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
++ + + + + + D + IS + +
Sbjct: 183 TADTAALKAVIDNIDTALDTVNSKRADFGAAQNRFDAVISNLQVSVENQ 231
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 47/137 (34%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + + T+ D + A++ ++ IDT +
Sbjct: 143 GTLTFQIGANTTADDTIDVVTTNMKVDTTITAVTGGTIDNTADTAALKAVIDNIDTALDT 202
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ G+ +R +++ + R++DAD A+E+ LS Q QQ
Sbjct: 203 VNSKRADFGAAQNRFDAVISNLQVSVENQSAARSRIMDADFAAETANLSRAQILQQAGTA 262
Query: 435 ALSIVNNSTARILSLFR 451
++ N +L L +
Sbjct: 263 MVAQANQLPQTVLKLLQ 279
>gi|16080589|ref|NP_391416.1| flagellin [Bacillus subtilis subsp. subtilis str. 168]
gi|221311487|ref|ZP_03593334.1| flagellin [Bacillus subtilis subsp. subtilis str. 168]
gi|221315814|ref|ZP_03597619.1| flagellin [Bacillus subtilis subsp. subtilis str. NCIB 3610]
gi|221320729|ref|ZP_03602023.1| flagellin [Bacillus subtilis subsp. subtilis str. JH642]
gi|221325014|ref|ZP_03606308.1| flagellin [Bacillus subtilis subsp. subtilis str. SMY]
gi|120287|sp|P02968|FLA_BACSU RecName: Full=Flagellin
gi|142909|gb|AAA22437.1| flagellin [Bacillus subtilis]
gi|143033|gb|AAA22509.1| flagellin [Bacillus subtilis]
gi|1762343|gb|AAC44951.1| flagellin [Bacillus subtilis subsp. subtilis str. 168]
gi|2636062|emb|CAB15553.1| flagellin protein [Bacillus subtilis subsp. subtilis str. 168]
Length = 304
Score = 122 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/296 (15%), Positives = 99/296 (33%), Gaps = 5/296 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ +L N + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTLNRLSSNNSASQKNMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI-----QSEITQLQSQ 118
S G S + A+ +++ ++ ++ + GT K+ Q EI+ L +
Sbjct: 63 SKNSQDGISLIQTAEGALTETHAILQRVRELVVQAGNTGTQDKATDLQSIQDEISALTDE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ I+ + FNG+ L TA+ A F N QI+ + + + +
Sbjct: 123 IDGISNRTEFNGKKLLDGTYKVDTATPANQKNLVFQIGANATQQISVNIEDMGADALGIK 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ ++ K D+ + ++++ N
Sbjct: 183 EADGSIAALHSVNDLDVTKFADNAADTADIGFDAQLKVVDEAINQVSSQRAKLGAVQNRL 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
++ L AA + + + +
Sbjct: 243 EHTINNLSASGENLTAAESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQQPQN 298
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 58/166 (34%)
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
D + T ++ K+ I + +S+ L+
Sbjct: 139 DGTYKVDTATPANQKNLVFQIGANATQQISVNIEDMGADALGIKEADGSIAALHSVNDLD 198
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+T+ A+ A + + + +D I ++ K+G++ +R+ + + + +
Sbjct: 199 VTKFADNAADTADIGFDAQLKVVDEAINQVSSQRAKLGAVQNRLEHTINNLSASGENLTA 258
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D DMA E + + Q + L+ N +L L R
Sbjct: 259 AESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQQPQNVLQLLR 304
>gi|242392304|dbj|BAH80325.1| flagellin [Bacillus sp. Kps3]
Length = 378
Score = 122 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 79/220 (35%), Gaps = 3/220 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++L +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTYRQLTIGQGAAAKNMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++ E+ QL++++
Sbjct: 63 SKNSQDAISLIQTAEGALNETHAILQRMRELAVQASNGTNTDEDRQALNEEVQQLKTEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN + L GS+ A + + + + +
Sbjct: 123 RIGTQTEFNTQKLLDGTFGSTVDQDATNTTALTVTGVATITTSGGLKADTYTISWNATDN 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ G + I +DA+ T
Sbjct: 183 VYELQDSGGAVIGKAKDLAADGAGSITFMGWDATNNKDTG 222
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 33/284 (11%), Positives = 66/284 (23%)
Query: 168 YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
T + E L + T+
Sbjct: 95 VQASNGTNTDEDRQALNEEVQQLKTEITRIGTQTEFNTQKLLDGTFGSTVDQDATNTTAL 154
Query: 228 SGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
+ + + TI + G K+ +AA
Sbjct: 155 TVTGVATITTSGGLKADTYTISWNATDNVYELQDSGGAVIGKAKDLAADGAGSITFMGWD 214
Query: 288 WVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT 347
+ + + V S ++
Sbjct: 215 ATNNKDTGVSLITVTTNGAYTLQSLDGSDIVIKGSANNFQIGSNQGQVMGLSIGDMTASG 274
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
+T A + + ++ ID IK + K+G+ +R+ + + + +
Sbjct: 275 LAVDTVAVDTYDNAQSAIASIDNAIKLVSQERSKLGAYQNRLEHTINNLGTAAENLTAAE 334
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D DMA E + Q A L+ + +L L R
Sbjct: 335 SRIRDVDMAKEMMEFTKNNILTQAAQAMLAQSSQIPQAVLQLLR 378
>gi|237793558|ref|YP_002861110.1| flagellin protein [Clostridium botulinum Ba4 str. 657]
gi|229262016|gb|ACQ53049.1| flagellin protein [Clostridium botulinum Ba4 str. 657]
Length = 283
Score = 122 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 78/204 (38%), Gaps = 3/204 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM A + + +R++SG+R++ A+D+ A +I++ M++ L
Sbjct: 3 INHNVNAMIAYRNIMINGALAGKAMERLASGMRINRASDDPAGLAISEKMRAQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + G S + +A+ G+ + ++ ++ D K+IQ EI QL +
Sbjct: 63 SRNVQDGISMIQVAEGGVKEIQSMLQRMRELAVQAANGTNSPEDRKNIQDEIDQLTRGID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
DIA+G+ FN L + + + + + ++ T
Sbjct: 123 DIAKGTEFNTIKLLNVNATDAGEVKLQIGANEGQFFGVKLQNMNSAALGINGNTDKDGVD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLK 204
+E+ + +
Sbjct: 183 VSTSEKASAAIKVFDDAINKASSF 206
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 44/117 (37%)
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + +N + + + D I A++ +G+ S+ + + +
Sbjct: 163 QNMNSAALGINGNTDKDGVDVSTSEKASAAIKVFDDAINKASSFMSSLGASSNMLEHRIN 222
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+++ + + R+ DADMA E + QQ+A S V + L +
Sbjct: 223 YLENTIGNLTEAESRIRDADMAKEMMNYTKYSVLQQVAQTIFSQVLKQQESTIQLLK 279
>gi|168182150|ref|ZP_02616814.1| flagellin protein [Clostridium botulinum Bf]
gi|182674663|gb|EDT86624.1| flagellin protein [Clostridium botulinum Bf]
Length = 283
Score = 122 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 78/204 (38%), Gaps = 3/204 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM A + + +R++SG+R++ A+D+ A +I++ M++ L
Sbjct: 3 INHNVNAMIAYRNIMINGALAGKAMERLASGMRINRASDDPAGLAISEKMRAQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + G S + +A+ G+ + ++ ++ D K+IQ EI QL +
Sbjct: 63 SRNVQDGISMIQVAEGGVKEIQSMLQRMRELAVQAANGTNSPEDRKNIQDEIDQLTRGID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
DIA+G+ FN L + + + + + ++ T
Sbjct: 123 DIAKGTEFNTIKLLNVNATDAGEVKLQIGANEGQFFGVKLQNMNSAALGINGNTDKDGVD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLK 204
+E+ + +
Sbjct: 183 VSTSEKASAAIKVFDDAINKASSF 206
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 44/117 (37%)
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + +N + + + D I A++ +G+ S+ + + +
Sbjct: 163 QNMNSAALGINGNTDKDGVDVSTSEKASAAIKVFDDAINKASSFMSSLGASSNMLEHRIN 222
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+++ + + R+ DADMA E + QQ+A S V + L +
Sbjct: 223 YLENTIGNLTEAESRIRDADMAKEMMNYTKYSVLQQVAQAIFSQVLKQQESTIQLLK 279
>gi|153954729|ref|YP_001395494.1| flagellin, subunit protein B [Clostridium kluyveri DSM 555]
gi|219855193|ref|YP_002472315.1| hypothetical protein CKR_1850 [Clostridium kluyveri NBRC 12016]
gi|146347587|gb|EDK34123.1| Flagellin, subunit protein B [Clostridium kluyveri DSM 555]
gi|219568917|dbj|BAH06901.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 276
Score = 122 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 39/225 (17%), Positives = 82/225 (36%), Gaps = 3/225 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA SI++ M++ L+
Sbjct: 3 INHNLNAMNAHRQMGINTGNGAKSMEKLSSGLRINRAGDDAAGLSISEKMRAQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D ++ E+ QL ++
Sbjct: 63 SRNSQDGISLIQTAEGALNETHSILQRMRELAVQSASDTNVTVDRSALNDEMGQLIDEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN ++ L+T A + I ++ + ++ S
Sbjct: 123 RIANATQFNEQDILKTAQTLDIQVGANNDSNQRITLSWKAQTKASLGEDAINISAVVVSD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+ + I V K +
Sbjct: 183 KTSAQSAITKINSAIISVSKSRSKMGSYQNRLEHTIANLDNSSEN 227
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/273 (11%), Positives = 75/273 (27%)
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + + K + +G + A+
Sbjct: 4 NHNLNAMNAHRQMGINTGNGAKSMEKLSSGLRINRAGDDAAGLSISEKMRAQIRGLNQAS 63
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ GI+ I A + S + + + + +
Sbjct: 64 RNSQDGISLIQTAEGALNETHSILQRMRELAVQSASDTNVTVDRSALNDEMGQLIDEIDR 123
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ + DS + + + + + ++K
Sbjct: 124 IANATQFNEQDILKTAQTLDIQVGANNDSNQRITLSWKAQTKASLGEDAINISAVVVSDK 183
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+ + ++ I++ I + + K+GS +R+ + + ++ R+ D DMASE
Sbjct: 184 TSAQSAITKINSAIISVSKSRSKMGSYQNRLEHTIANLDNSSENLQAAESRVRDVDMASE 243
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ QQ A L+ N +L L R
Sbjct: 244 MMNYTKNNILQQAAQAMLAQANQEPQGVLQLLR 276
>gi|170791555|gb|ACB38419.1| flagellin A [Aeromonas bestiarum]
Length = 303
Score = 122 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 3/192 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + N +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNLMNTNKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E QL +++
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYDQLMTEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A ++F G+N L+ S A + R V +S
Sbjct: 125 RVAGDTTFGGQNLLQGGYVGSFQVGADAGQTITFRMTTAFTISGMASATSGSAAVTTTTS 184
Query: 181 TDGTERYGLLDR 192
+
Sbjct: 185 GEPYLVTKTAGT 196
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 66/239 (27%)
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + T GA + + +
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYDQLMTEID 124
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ G + + + +D G T + T + + ++ +
Sbjct: 125 RVAGDTTFGGQNLLQGGYVGSFQVGADAGQTITFRMTTAFTISGMASATSGSAAVTTTTS 184
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + + + ++ +D IK ++G++ +R
Sbjct: 185 GEPYLVTKTAGTPVSSTSMSSIAAASSAQSAMANLDYMIKVVDGKRAELGAVQNRFDSTI 244
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + V R+ DAD A E+ L+ QQ A LS N LSL +G
Sbjct: 245 RNQANVSENVSAARSRIRDADFAIETANLTKQNILQQAASTILSQANQRPQSALSLLQG 303
>gi|260505559|gb|ACX42258.1| flagellin [Paenibacillus dendritiformis]
Length = 271
Score = 122 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 68/179 (37%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A + L N + +++SSG R++ AAD+AA +I++ M+ G ++
Sbjct: 5 INTNVGAINAHRNLGMNNTAMGKTMEKLSSGFRINRAADDAAGLAISEKMRFQIGGMNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ + D ++ Q E+ L +++
Sbjct: 65 MRNAQDGISLIQTAEGALTEVHSMLQRLNTLANQSATGTYDEKDRENTQKEVDALLAEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+IA + FNG L S ++ S
Sbjct: 125 NIASSTKFNGIELLSKTGKVSFQIGVTKDNVLTADLAKMDTNALKLNGLSIGTQTNASS 183
Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 38/96 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ I+ I + G++ +R+ + + + + + R+ +AD
Sbjct: 175 IGTQTNASSALAKIEAAINQVSEQRASFGAVQNRLEHTINNLGVTAENLSASESRIRNAD 234
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA E T + Q Q L+ N++ +L L
Sbjct: 235 MAKEMTDFTRNQILVQAGTAMLAQANSAPQSVLKLL 270
>gi|88683097|emb|CAJ77154.1| flagellin [Escherichia coli]
Length = 546
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 50/379 (13%), Positives = 98/379 (25%), Gaps = 4/379 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + ++ +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSSMSTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQSSTGTNSQSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D + + + D T + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMK-IQVGANDGQTITIDLKQIDSNTLKLSGFNVNGKGGVA 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ T + + + + A
Sbjct: 183 NAVATAADMTAAGFTLAGNTYTGSAGFKAASSADVLGSLANGDTVLSAGTVADGLSGAAN 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A A + ++ I D+ + +
Sbjct: 243 TYTYDKANDKFTFGVTGATSAQVLSYLNPSAGDTTSATVTIGTTKQDVIIAKDGTLTAKD 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
D + TL + S+ T + +
Sbjct: 303 DGAALYLDTTGNLTKNSAGTPPVATLAGXQANGGGTAIASSITTASGETLTLAGGTAGTI 362
Query: 360 AMEEMVSFIDTQIKCATAA 378
+ D A AA
Sbjct: 363 DVTNASISADKLQSGAAAA 381
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/309 (11%), Positives = 88/309 (28%)
Query: 144 SIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
S A + +D +T + + + + + +
Sbjct: 238 SGAANTYTYDKANDKFTFGVTGATSAQVLSYLNPSAGDTTSATVTIGTTKQDVIIAKDGT 297
Query: 204 KDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTS 263
+ K + + A + + +
Sbjct: 298 LTAKDDGAALYLDTTGNLTKNSAGTPPVATLAGXQANGGGTAIASSITTASGETLTLAGG 357
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
+ + SA ++ G + +T ++ + N + + + T +T
Sbjct: 358 TAGTIDVTNASISADKLQSGAAAAGYTTSTGYAVDNAGAVKNGAADVYVDNNAALTTTNT 417
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+ + + + TDA A + + +D I +G
Sbjct: 418 ATYFVQTDGSITNGSGKVAHKDANGKITTDAQTATTATTDPLKALDDAISSIDKFRSSLG 477
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
++ +R+ + + + R+ DAD A+E + +S Q QQ L+ N
Sbjct: 478 AVQNRLSSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVP 537
Query: 444 ARILSLFRG 452
++LSL +G
Sbjct: 538 QQVLSLXQG 546
>gi|320157097|ref|YP_004189476.1| flagellin protein FlaE [Vibrio vulnificus MO6-24/O]
gi|319932409|gb|ADV87273.1| flagellin protein FlaE [Vibrio vulnificus MO6-24/O]
Length = 375
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 86/229 (37%), Gaps = 3/229 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN SAM A + L + Q +SSG R++ A+D+AA IA + L
Sbjct: 1 MVSLNTNVSAMVAQRHLSTAASQVAETQKNLSSGFRINSASDDAAGMQIANTLHVQTRGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ + A+ + + +++ +++ D +S+Q E+ L+
Sbjct: 61 DVALTNAHSAYAVAETAEGALEEGSEILQRLRSLSLQAANGSNSDDDRQSLQLEVVVLKD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IAR ++F G+N GS + + + ++ N + I + Y +
Sbjct: 121 EVERIARTTTFAGKNLFDGSYGSKSFHLGANSNSISLQLKNMRTHIPEMGGYHYLASEPA 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
D + L + I + D+ ++T
Sbjct: 181 DDDWQVDKESRQLSFTFRDSEGDDQSIKISLKPGDSLEEVATYINSQQN 229
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ++ +DT I+ + +IGS +R+ D ++ + V + GR+ D D
Sbjct: 279 ISSVGGAQLAIAVVDTAIQYLDSHRSEIGSFQNRVEGTMDNLQSINRNVTESKGRIWDTD 338
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A ST L Q QQ L+ + + L
Sbjct: 339 FAKASTALVKSQVLQQATSALLAQAKQAPGSAIGLL 374
>gi|183220976|ref|YP_001838972.1| flagellar filament core protein FlaB [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189911071|ref|YP_001962626.1| endoflagellar filament core protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167775747|gb|ABZ94048.1| Endoflagellar filament core protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167779398|gb|ABZ97696.1| Flagellar filament core protein FlaB [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 282
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 72/172 (41%), Gaps = 3/172 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ A + L+ + NL +++SSG+R++ A D+A+ ++++ M++ L
Sbjct: 3 INHNVSAIFAHRTLKSNDANLSKDIEKLSSGMRINKAGDDASGLAVSEKMRTQIAGLRRA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + A+ + + +++ ++ D + IQ E++QL ++
Sbjct: 63 EQNTEDGMSLIQTAEGYLQETHEIVQRVRVLAVQAANGIYSEEDRQQIQVEVSQLVDEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
IA + FN L + + +V I T++
Sbjct: 123 RIASQAEFNKMKLLTGAFARLNPTASMWFHIGANMHQRERVYIETMNTAALG 174
Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 40/115 (34%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + L + + ++ D ++ + +G+ +R+ +
Sbjct: 168 MNTAALGLRNPTVLTFISLSTAGKANSVIGLCDDALRVISKQRADLGAYYNRMEHAAKGL 227
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R+ D DMA + T + Q Q A L+ N + ++ L +
Sbjct: 228 MNAYENTQASESRIRDTDMAEQMTSFTRYQILTQAATSMLAQANMKSQSVMRLLQ 282
>gi|405545|gb|AAA62843.1| flagellin [Pseudomonas putida]
Length = 688
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 72/205 (35%), Gaps = 3/205 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++MS + L + L R+SSGL+++ A D+AA I+ + + LS
Sbjct: 3 LTVNTNITSMSVQKNLNKSSDALGTTMGRLSSGLKINSAKDDAAGLQISNRLTTQIKGLS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S A+ M+ + ++M ++ D S+Q E T L +
Sbjct: 63 VAVKNANDGISIAQTAEGAMATSGNIMQRMRELALQSANGSNSDDDRASMQQEFTALSGE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA ++F G N L S+ + + S + Y +
Sbjct: 123 LTRIANTTTFGGRNLLDGTFSGSSFQVGANSNESISFGMKDVSATSMKGNYNEASVAGGV 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVL 203
++ +
Sbjct: 183 ATLQASVTGAAGKFGTNNAGSTSAS 207
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/329 (10%), Positives = 85/329 (25%)
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ + ++ ++ +T
Sbjct: 359 VTASIDSATGQLKLNSAAGFDVGGTAGTLTGLGLTAGSVAIAPQTTGLASAASIDINGTT 418
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ LD + + + T++ +
Sbjct: 419 FNFAQGDDLDAIVDNINNNGAGAVGSGTALTGVTAKNDNGRLVLTSANGQDIKLDNGSGV 478
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A V L + + TS S + M + + A + S
Sbjct: 479 TGQGALAAVGLNSGTTKAGLVADTSISLNGVEVKFKKGDDMDSIAASINAASTGVNASVV 538
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
S+ + + + L + + + +
Sbjct: 539 VNAGSSTLSLFADQDITVADGSNGTGLARRAGSDCCCRQTSALEMESTVSNLNITDAQSA 598
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ + +D ++ + ++G++ +R ++ + + R+ DAD A+E+
Sbjct: 599 QQAIQVLDGAMQSLDSQRSQLGAVQNRFDSTVANLQSISENSTAARSRIQDADFAAETAE 658
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
LS QT QQ + LS N + +L L
Sbjct: 659 LSKQQTLQQASTAILSQANQLPSSVLKLL 687
>gi|170791575|gb|ACB38429.1| flagellin A [Aeromonas popoffii]
Length = 289
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 76/204 (37%), Gaps = 3/204 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + + +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNMTNSTKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D +++Q E+ QL +++
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSAKDREALQKEVDQLGAEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++F G L G + A + + + +T + S
Sbjct: 125 RIAGATTFAGTKLLDGSFGGTFQVGADANQTIGFSLSQKDGFSISGIATVAGKTAIFKSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLK 204
+ + +
Sbjct: 185 STAKGIDISSQSEAQKVLGAVDSM 208
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 44/115 (38%)
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
A + + ++++ +D+ ++ ++G++ +R+
Sbjct: 175 AGKTAIFKSGSTAKGIDISSQSEAQKVLGAVDSMLEVVDGKRAELGAVQNRLDSTIRNQA 234
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + V R+ DAD A+E+ ++ QQ A LS N L L +G
Sbjct: 235 NISENVSAARSRIRDADFATETANMTKQNILQQAASSVLSQANQRPQAALQLLQG 289
>gi|193071144|ref|ZP_03052068.1| flagellin subunit [Escherichia coli E110019]
gi|192955539|gb|EDV86018.1| flagellin subunit [Escherichia coli E110019]
Length = 670
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 53/386 (13%), Positives = 113/386 (29%), Gaps = 4/386 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSTSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR-DDNGKVQITTIDYYLDPETVLLD 178
++ + FNG N L D A I + + ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLSKDGSMKIQVGANDGETITIDLKKIDSDTLNLAGFNVNGKGSVAN 183
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ + +S A + + A
Sbjct: 184 TAATSDDLKLAGFTKGTTDTNGVTAYTNTISNDKAKASDLLANITDGSVITGGGANAFGV 243
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ + A ++ T +P+ S+ +++
Sbjct: 244 AAKNGYTYDAASKSYSFAADGADSAKTLSIINPNTGDSSQATVTIGGKEQKVNISQDGKI 303
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ + + + T + L DS ++ T T
Sbjct: 304 TAADDNATLYLDKQGNLTKTNAGNDTAATWDGLISNSDSTGAVPVGVATTITITSGTASG 363
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGS 384
++++ + I T A G +
Sbjct: 364 MSVQSAGAGIQTSTNSQILAGGAFAA 389
Score = 96.3 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 50/143 (34%)
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
V + + + +S + T+A + + + +D
Sbjct: 528 YVEDGALSANATKDVTYFEQKNGAITNSTGGTIYETADGKLTTEATTASSSTADPLKALD 587
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
I +G++ +R+ + + + R+ DAD A+E + +S Q Q
Sbjct: 588 EAISSIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQ 647
Query: 430 QLAVQALSIVNNSTARILSLFRG 452
Q L+ N ++LSL +G
Sbjct: 648 QAGNSVLAKANQVPQQVLSLLQG 670
>gi|76579086|gb|ABA48561.1| flagellin [Burkholderia pseudomallei 1710b]
Length = 482
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 67/454 (14%), Positives = 133/454 (29%), Gaps = 69/454 (15%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 95 MLGINSNINSLVAQQNLNGSQGALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGL 154
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A +G++ + + I+ +D+ ++Q E+ Q S
Sbjct: 155 NQGVSNANDGVSILQTASSGLTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVAQQIS 214
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG+N L G+ + + +V + D + I + L
Sbjct: 215 EVNRIASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVDLTQSMSAAKIGGGMVQTGQTL 274
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + G + E + A
Sbjct: 275 GTIKVAIDSSGAAWSSGSTGQETT---------------QINVVSDGKGGFTFTDQNNQA 319
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
A AA + + S S + A SAT + +
Sbjct: 320 LSSTAVTAVFGSSTAGTGTAASPSFQTLALSTSATSALSATDQANATAMVAQINAVNKPQ 379
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
T ++ + +T + + L + ++ T N
Sbjct: 380 TVSNLDISTQTGAYQAMVSIDNALATVNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQS 439
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ + D + A + +
Sbjct: 440 Q------IQSADFAQETANLSRAQ------------------------------------ 457
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
QQ + L+ N+ ++L L +
Sbjct: 458 ---------VLQQAGISVLAQANSLPQQVLKLLQ 482
>gi|218705418|ref|YP_002412937.1| flagellin [Escherichia coli UMN026]
gi|293405409|ref|ZP_06649401.1| flagellin [Escherichia coli FVEC1412]
gi|298381053|ref|ZP_06990652.1| flagellin [Escherichia coli FVEC1302]
gi|300899178|ref|ZP_07117455.1| bacterial flagellin [Escherichia coli MS 198-1]
gi|30059874|gb|AAP13309.1| FliC [Escherichia coli]
gi|218432515|emb|CAR13408.1| FliC Flagellin [Escherichia coli UMN026]
gi|284921836|emb|CBG34909.1| flagellin [Escherichia coli 042]
gi|291427617|gb|EFF00644.1| flagellin [Escherichia coli FVEC1412]
gi|298278495|gb|EFI20009.1| flagellin [Escherichia coli FVEC1302]
gi|300357192|gb|EFJ73062.1| bacterial flagellin [Escherichia coli MS 198-1]
Length = 554
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 55/368 (14%), Positives = 106/368 (28%), Gaps = 9/368 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I L+ ++
Sbjct: 124 DRVSGQTQFNGVNVLSKDGSMKIQVGANDGETITIDL------KKIDSDTLNLAGFNVNG 177
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ L +K++ + V+ Y A +++ L +G +
Sbjct: 178 EGETANTAATLKDMVGLKLDNTGVTTAGVNRYIADKAVASSTDILNAVAGVDGSKVSTEA 237
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D G A P+ T S S + A+ G + + +
Sbjct: 238 DVGFGAAAPGTPVEYTYHKDTNTYTASASVDATQLAAFLNPEAGGTTAATVSIGNGTTAQ 297
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + D+ + L
Sbjct: 298 EQKVIIAKDGSLTAADDGAALYLDDTGNLSKTNAGTDTQAKLSDLMANNANAKTVITTDK 357
Query: 360 AMEEMVSF 367
+
Sbjct: 358 GTFTANTT 365
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/354 (14%), Positives = 97/354 (27%), Gaps = 1/354 (0%)
Query: 99 VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN 158
G + + L +A G++ +
Sbjct: 202 TTAGVNRYIADKAVASSTDILNAVAGVDGSKVSTEADVGFGAAAPGTPVEYTYHKDTNTY 261
Query: 159 GKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+T T G + KV + + A+ +
Sbjct: 262 TASASVDATQLAAFLNPEAGGTTAATVSIGNGTTAQEQKVIIAKDGSLTAADDGAALYLD 321
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
T +G +A + A + NTT S + A
Sbjct: 322 DTGNLSKTNAGTDTQAKLSDLMANNANAKTVITTDKGTFTANTTKFDGVDISVDASTFAN 381
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
++ V T + T + G S G D E +
Sbjct: 382 AVKNETYTATVGVTLPATYTVNNGTAASAYLVDGKVSKTPAEYFAQADG-TITSGENAAT 440
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ ++ + T+ +E A ++ +D I +G+I +R+ +
Sbjct: 441 SKAIYVSANGNLTTNTTSESEATTNPLAALDDAIASIDKFRSSLGAIQNRLDSAVTNLNN 500
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 501 TTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 554
>gi|162418942|ref|YP_001606496.1| phase-1 flagellin [Yersinia pestis Angola]
gi|162351757|gb|ABX85705.1| phase-1 flagellin [Yersinia pestis Angola]
Length = 225
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 35/91 (38%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + +D IK +G++ +R + + R+ DAD A+E
Sbjct: 134 ATASPLETLDDAIKQVDGLRSSLGAVQNRFESAVTNLNNTVTNLTSARSRIEDADYATEV 193
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ +S Q QQ LS N +LSL
Sbjct: 194 SNMSRAQILQQAGTSVLSQANQVPQTVLSLL 224
>gi|116328028|ref|YP_797748.1| endoflagellar filament core protein [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116331519|ref|YP_801237.1| endoflagellar filament core protein [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|116120772|gb|ABJ78815.1| Endoflagellar filament core protein [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116125208|gb|ABJ76479.1| Endoflagellar filament core protein [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 281
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 68/158 (43%), Gaps = 3/158 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A+++ + L+ N + + +SSG+R++ A D+A+ ++++ M++ L
Sbjct: 3 INHNLAAINSHRVLKFQNNEVAKNMETLSSGMRINRAGDDASGLAVSEKMRTQVKGLRQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + + + + D++ I+ D + IQ E++QL ++
Sbjct: 63 ERNTEDGMSLIQTTEGYLQETNDIIQRIRVLAIQSSNGIYSAEDRQMIQVEVSQLVDEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN 158
IA + FN L+ D + + + +
Sbjct: 123 RIASQAEFNKMALLQGDFARGSRTSSMWFHIGPNQHQR 160
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 35/96 (36%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + + +D + +G+ +R+ + + + ++ R+ D DM
Sbjct: 186 STAEFANDSIGVLDDALMKINKQRANLGAYFNRLEHASKGLMVAYENIQASESRIRDTDM 245
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A E+ + Q Q L+ N +L L R
Sbjct: 246 AEETVAFTKNQILVQSGTAMLAQANVRPQSVLQLLR 281
>gi|196249397|ref|ZP_03148095.1| flagellin domain protein [Geobacillus sp. G11MC16]
gi|196211154|gb|EDY05915.1| flagellin domain protein [Geobacillus sp. G11MC16]
Length = 253
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 69/181 (38%), Gaps = 3/181 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++L +++SSGLR++ A D+AA SI++ M+ L
Sbjct: 3 INHNIAALNTYRQLTIGQNVAAKNMEKLSSGLRINRAGDDAAGLSISEKMRGQIRGLEQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ G S + A+ G+++A ++ ++ D ++IQ E QL L
Sbjct: 63 ARNAQDGISLIQTAEGGLNEAHAILQRMRELAVQAANDTNTTEDRQAIQDEANQLAKDLN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + L G + +G+ D +
Sbjct: 123 RIANNTEFNTQKLLNGTGGPNDNGSFVFQVGANQDQTITLTIGDMTAGTGLSVATGDDET 182
Query: 181 T 181
Sbjct: 183 A 183
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 41/133 (30%)
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
D+ A T G+ + V + +G S+ T
Sbjct: 118 AKDLNRIANNTEFNTQKLLNGTGGPNDNGSFVFQVGANQDQTITLTIGDMTAGTGLSVAT 177
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
+ D + ++ ID IK +A K+G+ +R+ + + + +
Sbjct: 178 GDDETADAIDISSNSTTATAAITTIDQAIKKVSAERSKLGAYQNRLEYSINNLNTSAENL 237
Query: 404 EKGVGRLVDADMA 416
R+ D D A
Sbjct: 238 TAAESRIRDVDYA 250
>gi|297583339|ref|YP_003699119.1| flagellin domain-containing protein [Bacillus selenitireducens
MLS10]
gi|297141796|gb|ADH98553.1| flagellin domain protein [Bacillus selenitireducens MLS10]
Length = 270
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 36/262 (13%), Positives = 89/262 (33%), Gaps = 3/262 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++ +++ ++ +++SSGLR++ A D+AA +I++ M++ L
Sbjct: 3 INNNIPALNTHRQMGINQNAMQNSMEKLSSGLRINRAGDDAAGLAISEKMRAQINGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + A+ +++ D++ ++ D +Q E+ L ++
Sbjct: 63 SRNAQDGISLIQTAEGALNETHDILQRMREISVQSANDTNTDDDRAELQKELDALIEEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ + FN + L + I + S L
Sbjct: 123 RIAQNTEFNTQELLDGTYDAKEFHIGANETQSITISIGDMQAAALGIDSLSINDQASADG 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + D + + + ++ ++ + + + +
Sbjct: 183 AIATLDAAIKDVSSERADLGAIQNRLEHTISNLDNASENLSAAESRIRDVDMASEMMEMT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTT 262
+A ++ + A +
Sbjct: 243 RANILSQASQSMLAQANQQPQS 264
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 41/96 (42%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
N++ + + ++ +D IK ++ +G+I +R+ + + + R+ D D
Sbjct: 174 INDQASADGAIATLDAAIKDVSSERADLGAIQNRLEHTISNLDNASENLSAAESRIRDVD 233
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MASE ++ Q + L+ N +L L
Sbjct: 234 MASEMMEMTRANILSQASQSMLAQANQQPQSVLQLL 269
>gi|3377710|gb|AAC28094.1| flagellin subunit [Escherichia coli]
gi|30059860|gb|AAP13302.1| FliC [Escherichia coli]
Length = 670
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 53/386 (13%), Positives = 113/386 (29%), Gaps = 4/386 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR-DDNGKVQITTIDYYLDPETVLLD 178
++ + FNG N L D A I + + ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLSKDGSMKIQVGANDGETITIDLKKIDSDTLNLAGFNVNGKGSVAN 183
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ + +S A + + A
Sbjct: 184 TAATSDDLKLAGFTKGTTDTNGVTAYTNTISNDKAKASDLLANITDGSVITGGGANAFGV 243
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ + A ++ T +P+ S+ +++
Sbjct: 244 AAKNGYTYDAASKSYSFAADGADSAKTLSIINPNTGDSSQATVTIGGKEQKVNISQDGKI 303
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ + + + T + L DS ++ T T
Sbjct: 304 TAADDNATLYLDKQGNLTKTNAGNDTAATWDGLISNSDSTGAVPVGVATTITITSGTASG 363
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGS 384
++++ + I T A G +
Sbjct: 364 MSVQSAGAGIQTSTNSQILAGGAFAA 389
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 50/143 (34%)
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
V + + + +S + T+A + + + +D
Sbjct: 528 YVEDGALSANATKDVTYFEQKNGAITNSTGGTIYETADGKLTTEATTASSSTADPLKALD 587
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
I +G++ +R+ + + + R+ DAD A+E + +S Q Q
Sbjct: 588 EAISSIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQ 647
Query: 430 QLAVQALSIVNNSTARILSLFRG 452
Q L+ N ++LSL +G
Sbjct: 648 QAGNSVLAKANQVPQQVLSLLQG 670
>gi|217959243|ref|YP_002337791.1| flagellin [Bacillus cereus AH187]
gi|217063875|gb|ACJ78125.1| flagellin [Bacillus cereus AH187]
Length = 373
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S+ G S + A + ++ +++ +++ + ++Q E +L+ Q++
Sbjct: 63 SNNTQDGMSLIRTADSALNSVSNILLRMRDLANQSANGTNTNENKAAMQKEFGELKEQIK 122
Query: 121 DIARGSSFNGENWLRTDLG 139
IA + FN ++ L D G
Sbjct: 123 YIAENTQFNDQHLLNADKG 141
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 59/181 (32%)
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ G D+ V+A YTNS K + ++T + K
Sbjct: 193 NATMDRLDATVPGTRDVDVQAAKDAFDKVKGFYTNSDSVKAIERAFEDYATASTAGTAKA 252
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
+ N T ++ ID +K +G+ +R+
Sbjct: 253 DAATAIKAAFDLAANKVGKPATGGAQGSANSLGAITKIDAALKTVADNRATLGATLNRLD 312
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ +K ++ ++ DADMA E + ++ + + + LS N + + L
Sbjct: 313 FNVNNLKSQASSMAAAASQVEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLL 372
Query: 451 R 451
+
Sbjct: 373 Q 373
>gi|19910971|dbj|BAB87737.1| flagellin protein FliA(B) [Clostridium novyi]
Length = 265
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 39/242 (16%), Positives = 83/242 (34%), Gaps = 3/242 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + +++SSGLR++ A D+AA SI++ M+ L+
Sbjct: 3 INHNMNAMNAHRMMGQNINGAGKAMEKLSSGLRINRAGDDAAGLSISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G+S + A+ +++ ++ ++ + D IQ E +QLQ+++
Sbjct: 63 SRNAQDGTSLIQTAEGALNETHAILQRMRELSVQAANDTNKTEDRAMIQKEFSQLQTEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + + FN +N L S + + N ++
Sbjct: 123 RIGKDTQFNKQNLLTGSAKSLDFQVGANAGQVINVKINDMRATALKIDAAKVSITKGANA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + S + + + A + + A
Sbjct: 183 KAAMTAIDTAINTVSDERATLGSIQNRLEHTINSDNNAAENLQAAESRIRDVDMAKEMMQ 242
Query: 241 QA 242
+
Sbjct: 243 FS 244
Score = 73.2 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/249 (10%), Positives = 55/249 (22%)
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + K ++ + + S
Sbjct: 1 MIINHNMNAMNAHRMMGQNINGAGKAMEKLSSGLRINRAGDDAAGLSISEKMRGQIRGLN 60
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
++ + A A N T +A ++ T
Sbjct: 61 QASRNAQDGTSLIQTAEGALNETHAILQRMRELSVQAANDTNKTEDRAMIQKEFSQLQTE 120
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T N M + A + +
Sbjct: 121 ITRIGKDTQFNKQNLLTGSAKSLDFQVGANAGQVINVKINDMRATALKIDAAKVSITKGA 180
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ IDT I + +GSI +R+ + + ++ R+ D DMA E
Sbjct: 181 NAKAAMTAIDTAINTVSDERATLGSIQNRLEHTINSDNNAAENLQAAESRIRDVDMAKEM 240
Query: 420 TRLSALQTQ 428
+ S
Sbjct: 241 MQFSKKNIL 249
>gi|220932544|ref|YP_002509452.1| flagellin domain protein [Halothermothrix orenii H 168]
gi|219993854|gb|ACL70457.1| flagellin domain protein [Halothermothrix orenii H 168]
Length = 282
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 76/207 (36%), Gaps = 3/207 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM+A + L+ + + +++SSG R++ AAD+AA +I++ M++ L+
Sbjct: 3 INHNISAMNAYRNLQFNDVKMGKTMEKLSSGYRINRAADDAAGLAISEKMRAQITGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S V A+ +++ +++ ++ D + +E+T+L +++
Sbjct: 63 IRNAQDGISLVQSAEGALTEVHSMLNRMRELAVQAANDTNTDEDRAHLNAEVTELINEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN L +S A IG + + + + +
Sbjct: 123 RIGSQTEFNEMQVLNGSFDASAGGTAIFHIGPNANQTINVNVASMNANAIGSTADVANLA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDID 207
+
Sbjct: 183 AISISTQSNAEIALDSIDTAINQISQQ 209
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 29/276 (10%), Positives = 83/276 (30%)
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ + ++ + ++ + + A IS K T ++
Sbjct: 6 NISAMNAYRNLQFNDVKMGKTMEKLSSGYRINRAADDAAGLAISEKMRAQITGLNQAIRN 65
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A + + + + + + + + A I
Sbjct: 66 AQDGISLVQSAEGALTEVHSMLNRMRELAVQAANDTNTDEDRAHLNAEVTELINEINRIG 125
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA 354
+ + + + + ++ + ++ + + +
Sbjct: 126 SQTEFNEMQVLNGSFDASAGGTAIFHIGPNANQTINVNVASMNANAIGSTADVANLAAIS 185
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + E + IDT I + K+G++ +R+ + + + ++ ++ R+ DAD
Sbjct: 186 ISTQSNAEIALDSIDTAINQISQQRAKLGAVQNRLEHTVNNLNVTKENLQAAESRIRDAD 245
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA+E + + Q Q L+ N +L L
Sbjct: 246 MAAEMMKFTKQQILVQAGTAMLAQANAKPQAVLQLL 281
>gi|300951548|ref|ZP_07165381.1| bacterial flagellin [Escherichia coli MS 116-1]
gi|300956560|ref|ZP_07168842.1| bacterial flagellin [Escherichia coli MS 175-1]
gi|300316660|gb|EFJ66444.1| bacterial flagellin [Escherichia coli MS 175-1]
gi|300449175|gb|EFK12795.1| bacterial flagellin [Escherichia coli MS 116-1]
gi|323940414|gb|EGB36605.1| flagellin [Escherichia coli E482]
Length = 670
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 53/386 (13%), Positives = 113/386 (29%), Gaps = 4/386 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR-DDNGKVQITTIDYYLDPETVLLD 178
++ + FNG N L D A I + + ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLSKDGSMKIQVGANDGETITIDLKKIDSDTLNLAGFNVNGKGSVAN 183
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ + +S A + + A
Sbjct: 184 TAATSDDLKLAGFTKGTTDTNGVTAYTNTISNDKAKASDLLANITDGSVITGGGANAFGV 243
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ + A ++ T +P+ S+ +++
Sbjct: 244 AAKNGYTYDAASKSYSFAADGADSAKTLSIINPNTGDSSQATVTIGGKEQKVNISQDGKI 303
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ + + + T + L DS ++ T T
Sbjct: 304 TAADDNATLYLDKQGNLTKTNAGNDTAATWDGLISNSDSTGAVPVGVATTITITSGTASG 363
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGS 384
++++ + I T A G +
Sbjct: 364 MSVQSAGAGIQTSTNSQILAGGAFAA 389
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 50/143 (34%)
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
V + + + +S + T+A + + + +D
Sbjct: 528 YVEDGALSANATKDVTYFEQKNGAITNSTGGTIYETADGKLTTEATTASSSTADPLKALD 587
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
I +G++ +R+ + + + R+ DAD A+E + +S Q Q
Sbjct: 588 EAISSIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQ 647
Query: 430 QLAVQALSIVNNSTARILSLFRG 452
Q L+ N ++LSL +G
Sbjct: 648 QAGNSVLAKANQVPQQVLSLLQG 670
>gi|183221515|ref|YP_001839511.1| flagellar filament 35 kDa core protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|167779937|gb|ABZ98235.1| Flagellar filament 35 kDa core protein (Flagellin class B; 35kDa
antigen) [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 281
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 70/158 (44%), Gaps = 3/158 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A+++ + L+ N + +++SSG+R++ A D+A+ ++++ M++ L
Sbjct: 3 INHNLAAINSHRVLKFQNEEVSKNMEKLSSGMRINRAGDDASGLAVSEKMRTQVNGLRQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + + + ++ D++ I+ D + IQ E++QL ++
Sbjct: 63 ERNTEDGMSLIQTTEGFLQESNDIIQRIRTLAIQSSNGIYTEEDRQMIQVEVSQLIDEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN 158
IA + FN N L+ D + + +
Sbjct: 123 RIASQAEFNKMNLLQGDFARGSRATSMWFHIGPNMHQR 160
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 36/96 (37%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + + +D + + +G+ +R+ + + + R+ DADM
Sbjct: 186 STADKSNDAIGTLDAALTRISKQRANLGAYFNRLEHAAKGLMNAYENTQASESRIRDADM 245
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A E+ + Q Q L+ N +LSL R
Sbjct: 246 AEETVAFTKNQILVQSGTAMLAQANVRPQGVLSLLR 281
>gi|238796921|ref|ZP_04640425.1| Flagellin [Yersinia mollaretii ATCC 43969]
gi|238719181|gb|EEQ10993.1| Flagellin [Yersinia mollaretii ATCC 43969]
Length = 373
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/369 (14%), Positives = 106/369 (28%), Gaps = 3/369 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L +L R+SSG+R++ A D+AA +I+ ++ L+
Sbjct: 4 VINTNSLSLVAQNNLNKSQSSLGTAIQRLSSGVRINSAKDDAAGQAISNRFTANITGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
S G S + +++ D + I+ D KSIQ EI +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEVNDNLQNIRRLTAQAQNGTNSESDRKSIQDEINARMAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FNG L D S A I + +D +
Sbjct: 124 NRISEQTEFNGVKVLSKDQTLSIQVGANDGQTIDIALSQMNAETLGMDGFDITAATAGAK 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + D +G IS + T A +
Sbjct: 184 AITAGTEVTDGTSTVTLDAAAIKDMKEAAFGVDGTGEISLVTDETGATFYAAVGKEKDGT 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + V P + + + + A +
Sbjct: 244 EVSTSLTATFVAEVPGPPVVPASVTFAKDADLTTDQLDAMKGPLKTIDEAMAKVDELRSG 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
N + + N + V+ + + D + + T
Sbjct: 304 LGAAQNRFDSVISNLNSTVNNLTESRSRILDADFASEVSNMSRANILQSAGITVLAQANQ 363
Query: 360 AMEEMVSFI 368
+ ++S +
Sbjct: 364 VPQNVLSLL 372
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 40/97 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ AM+ + ID + +G+ +R + + + + R++DAD
Sbjct: 277 TDQLDAMKGPLKTIDEAMAKVDELRSGLGAAQNRFDSVISNLNSTVNNLTESRSRILDAD 336
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ASE + +S Q + L+ N +LSL R
Sbjct: 337 FASEVSNMSRANILQSAGITVLAQANQVPQNVLSLLR 373
>gi|170791549|gb|ACB38416.1| flagellin A [Aeromonas salmonicida subsp. pectinolytica]
Length = 303
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 41/195 (21%), Positives = 74/195 (37%), Gaps = 3/195 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + N +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNLMNTNKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E TQL +++
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYTQLMTEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A+ ++F G+N L S A + R V SS
Sbjct: 125 RVAKDTTFGGQNLLNGGYVGSFQVGADAGQTITFRMTTAFTISGMASATSGSAEVTTTSS 184
Query: 181 TDGTERYGLLDRNHK 195
+
Sbjct: 185 GEPYLVTPKPGTAVT 199
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 69/239 (28%)
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + T GA + + + +
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYTQLMTEID 124
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ G + + + +D G T + T + + ++
Sbjct: 125 RVAKDTTFGGQNLLNGGYVGSFQVGADAGQTITFRMTTAFTISGMASATSGSAEVTTTSS 184
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ A+ + + + ++ +D IK + ++G++ +R
Sbjct: 185 GEPYLVTPKPGTAVTSASMSSIQAASSAQSAMANLDYMIKVVDSKRAELGAVQNRFDSTI 244
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + V R+ DAD A+E+ L+ QQ A LS N LSL +G
Sbjct: 245 RNQANISENVSAARSRIRDADFATETANLTKQNILQQAASTILSQANQRPQSALSLLQG 303
>gi|77918719|ref|YP_356534.1| flagellin/flagellar hook-associated protein [Pelobacter
carbinolicus DSM 2380]
gi|77544802|gb|ABA88364.1| flagellin/flagellar hook-associated protein [Pelobacter
carbinolicus DSM 2380]
Length = 276
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 72/182 (39%), Gaps = 3/182 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I TN +++ + L L R+SSGLR++ A D+AA +I+ M S ++
Sbjct: 4 TINTNVQSLNTQRSLSKSQNALGKSMQRLSSGLRINSAKDDAAGLAISDRMSSQIKGMNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S A+ + + +++ ++ D ++ SE ++L S+L
Sbjct: 64 AVRNANDAISFSQTAEGALGEMTNILQRMRELSVQSANATNSTDDRTALNSEFSELSSEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I + FNG+ L SS A++ + + + + LD +
Sbjct: 124 DRIVDTTKFNGQKLLDGTYASSNAAVFQVGANAGEKISVAIGNVDVSALGLDAAAITTAG 183
Query: 180 ST 181
+
Sbjct: 184 NA 185
Score = 99.8 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 33/224 (14%), Positives = 67/224 (29%)
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
+ I A A T+ + SV ++ +
Sbjct: 53 RMSSQIKGMNQAVRNANDAISFSQTAEGALGEMTNILQRMRELSVQSANATNSTDDRTAL 112
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR 348
++ S D + + + + E S
Sbjct: 113 NSEFSELSSELDRIVDTTKFNGQKLLDGTYASSNAAVFQVGANAGEKISVAIGNVDVSAL 172
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
+ A ++ ID + + G +G+ +R + + + +
Sbjct: 173 GLDAAAITTAGNASTSITAIDGALNSVDSLRGTLGAKQNRFESTIANLNNVSENLSAARS 232
Query: 409 RLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
R+VDAD+A+E++ ++ + QQ V L+ N S+ LSL G
Sbjct: 233 RIVDADIATETSEMTKMNILQQAGVSILAQANQSSQLALSLIGG 276
>gi|160878473|ref|YP_001557441.1| flagellin domain-containing protein [Clostridium phytofermentans
ISDg]
gi|160427139|gb|ABX40702.1| flagellin domain protein [Clostridium phytofermentans ISDg]
Length = 278
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 83/266 (31%), Gaps = 3/266 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N ++ + S++L NL +++SSG R++ A D+AA SI++ M+ L
Sbjct: 3 IQHNMTSANTSRQLGITTGNLAKSSEKLSSGYRINRAGDDAAGLSISEKMRGQIRGLEQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D SI +E+ QL ++
Sbjct: 63 STNAQDGISLIQTAEGALNEVHSIVQRMRELTVQASNDTYVDEDRTSISNEMKQLSKEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN D + + ++ +
Sbjct: 123 RIGTDTEFNTLKLFAADNTKYNFQVGANSDQLIEVTMKQISAAKLGIDDAKIADIVGTAG 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
GT+ L+D + + +V + A A T
Sbjct: 183 KTGTDITKLIDTVNSGLTIVSAFRSDLGAVQNRLEHTIANADNTAENLQASESRIRDTNM 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTS 266
+ + + A
Sbjct: 243 AKEMVKYSKDNILQQAAQSMLAQANQ 268
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 42/95 (44%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ +++ +++ + +A +G++ +R+ + ++ R+ D +MA
Sbjct: 184 TGTDITKLIDTVNSGLTIVSAFRSDLGAVQNRLEHTIANADNTAENLQASESRIRDTNMA 243
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + S QQ A L+ N ST +LSL R
Sbjct: 244 KEMVKYSKDNILQQAAQSMLAQANQSTQGVLSLLR 278
>gi|302339095|ref|YP_003804301.1| flagellin domain protein [Spirochaeta smaragdinae DSM 11293]
gi|301636280|gb|ADK81707.1| flagellin domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 286
Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 76/200 (38%), Gaps = 3/200 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ + +L+ N + +++SSGLR++ A D+A+ ++++ M+S L+
Sbjct: 3 INHNMSAVFSQNRLKISNNAVSKNMEKLSSGLRINRAGDDASGLAVSEKMRSQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S G S + + + + D++ ++ D IQ EI+QL ++
Sbjct: 63 SRNASNGISFIQSTEGYLQETQDILHRMRELSVQSANGIYSDEDRMQIQVEISQLVDEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG N L + + F N + + + + +
Sbjct: 123 RIASHAQFNGMNMLTGRFARESGENTVTASMWFHIGANMDQRERVFIGTMTSAALGVRNI 182
Query: 181 TDGTERYGLLDRNHKIKVEP 200
+ +
Sbjct: 183 GTNEILTIETPEDANRAIGT 202
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 36/94 (38%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ +D+ +K +G+ +R+ I + + ++ R+ D DMA
Sbjct: 192 TPEDANRAIGTLDSALKSVNKQRADLGAYQNRLEHAVKGIDVASENLQAAESRIRDTDMA 251
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
E + + Q Q LS N T +L LF
Sbjct: 252 DEMVKYTKNQILVQAGTAMLSQANMKTQSVLQLF 285
>gi|14278884|dbj|BAB58978.1| flagellin [Bacillus subtilis]
Length = 306
Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 71/185 (38%), Gaps = 3/185 (1%)
Query: 9 SAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
+A++ S++L + + +++SSGLR++ A D+AA +I++ M+S L S
Sbjct: 1 AALNTSRQLNAGSNSAAKNMEKLSSGLRINRAGDDAAGLAISEKMRSQIRGLDMASKNAQ 60
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARG 125
G S + ++ +++ ++ + T +D +Q E+ QL S++ I+
Sbjct: 61 DGISLIQTSEGALNETHSILQRMSELATQAANDTNTDSDRFELQKEMDQLASEVTRISTD 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+ FN + L T I + + N + +
Sbjct: 121 TEFNTKKLLDGTAKRLTFQIGANEGQTMSLSINKMDSESLKVGTTYTAQADGTLKSGDGT 180
Query: 186 RYGLL 190
Sbjct: 181 STATW 185
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 30/70 (42%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ I T I ++ K+G++ +R+ + + + + R+ D DMASE +
Sbjct: 237 LTTIKTAIDTVSSERAKLGAVQNRLEHTINNLGTSSENLTSAESRIRDVDMASEMMEYTK 296
Query: 425 LQTQQQLAVQ 434
Q +
Sbjct: 297 NNILTQASQA 306
>gi|4091905|gb|AAC99335.1| flagellin [Leptospira interrogans]
Length = 283
Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats.
Identities = 30/255 (11%), Positives = 80/255 (31%), Gaps = 3/255 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N S++++ + L+ ++ +SSG+R++ AAD+A+ ++++ +++ L
Sbjct: 3 INHNLSSVNSHRSLKFNELAVDKTMKALSSGMRINSAADDASGLAVSEKLRTQVNGLRQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + A+ + + +++ I+ D + +Q E++ L ++
Sbjct: 63 ERNTEDGMSFIQTAEGFLEQTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + + ++ + I T+
Sbjct: 123 RIASQAEFNKFKLFEGQFARGSRVASMWFHMGPNQNQRERFYIGTMTSKALKLVKADGRP 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ D + + + L + + D
Sbjct: 183 IAISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRD 242
Query: 241 QAKGIATIPVPLPAA 255
+ +
Sbjct: 243 ADMAEEVVSLTTKQI 257
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ D + +G+ +R+ + + ++ R+ DAD
Sbjct: 185 ISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDAD 244
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E L+ Q Q L+ N +L L +
Sbjct: 245 MAEEVVSLTTKQILVQSGTAMLAQANMKPNSVLKLLQ 281
>gi|170791569|gb|ACB38426.1| flagellin A [Aeromonas popoffii]
Length = 289
Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 75/204 (36%), Gaps = 3/204 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + + +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNMTNSTKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D +++Q E+ QL +++
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSAKDREALQKEVDQLGAEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++F G L G + A + + + + + S
Sbjct: 125 RIAGATTFAGTKLLDGSFGGTFQVGADANQTIRFSLSQKDGFSISGIATVAGKAAIFVSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLK 204
+ + +
Sbjct: 185 STAKGIDVSTQTKAQDVLGAVDAM 208
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 42/98 (42%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ++++ +D ++ ++G++ +R+ + + V R+ DAD
Sbjct: 192 VSTQTKAQDVLGAVDAMLEVVDGKRAELGAVQNRLDSTIRNQANISENVSAARSRIRDAD 251
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
A+E+ ++ QQ A LS N L L +G
Sbjct: 252 FATETANMTKQNILQQAASSVLSQANQRPQAALQLLQG 289
>gi|294636856|ref|ZP_06715189.1| flagellin [Edwardsiella tarda ATCC 23685]
gi|291089931|gb|EFE22492.1| flagellin [Edwardsiella tarda ATCC 23685]
Length = 350
Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 3/148 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L L +R+SSGLR++ A D+AA +I+ ++ L+
Sbjct: 4 VINTNSLSLMAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAISNRFTANINGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + I+ S SIQ EITQ ++
Sbjct: 64 ASRNANDGISLAQTTEGALNEVNNNLQNIRRLSVQAQNGSNSSSDLQSIQDEITQRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAK 147
I++ + FNG L D + A
Sbjct: 124 DRISQQTDFNGVKVLSKDQKLTIQVGAN 151
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 46/138 (33%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T + + V + ++ ++ +D +
Sbjct: 213 TLVSGTDKDGNAGYYIKTVAAGGATTYKVATIDKTTGKATPGADVTDVKTPLATLDKALS 272
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ +R + + + + R+ DAD A+E + +S Q QQ
Sbjct: 273 QVDQLRSGLGAVQNRFDSVINNLNSTVNNLSASRSRIQDADYATEVSNMSRAQILQQAGT 332
Query: 434 QALSIVNNSTARILSLFR 451
L+ N ST +LSL R
Sbjct: 333 SVLAQANQSTQNVLSLLR 350
>gi|257456455|ref|ZP_05621651.1| flagellar filament 34.5 kDa core protein [Treponema vincentii ATCC
35580]
gi|257446115|gb|EEV21162.1| flagellar filament 34.5 kDa core protein [Treponema vincentii ATCC
35580]
Length = 262
Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 3/200 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM A + + N + + +++SSGLR++ A D+A+ ++++ M+S L+
Sbjct: 3 INHNMSAMFAQRTVGQTNVSTQKNIEKLSSGLRINRAGDDASGLAVSEKMRSQIRGLNRA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S G S + +A+A + + DVM I+ D IQ E++QL +++
Sbjct: 63 SANAQDGISFIQVAEAYLQETTDVMQRIRELSVQSSNGIYSAEDRLYIQVEVSQLVAEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG N L T + F N ++ + + + +
Sbjct: 123 RIASHAQFNGMNMLTGRFARETGENTVTASMWFHIGANMDQRVRAYVGTMTAKALGVRDI 182
Query: 181 TDGTERYGLLDRNHKIKVEP 200
D + +
Sbjct: 183 GDESILTIDTPETANRAIGT 202
Score = 74.0 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +D IK +G+ +R+ + I + + ++ R+ D D
Sbjct: 190 IDTPETANRAIGTLDEAIKKINKQRADLGAYQNRLEMSVVGINVAAENLQASESRIRDVD 249
Query: 415 MASESTRLSALQT 427
MA E + QT
Sbjct: 250 MAKEMVEYTRNQT 262
>gi|125659376|dbj|BAF46892.1| flagellin [Escherichia coli]
Length = 622
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 54/380 (14%), Positives = 108/380 (28%), Gaps = 10/380 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + ++ +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSSMSTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQSSTGTNSESDLNSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGETITIDLKKIDSSTLNLTGFNVNGKGSVSN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ T+ L S + K + A +F
Sbjct: 184 TAATTDTLKLAGFTAGATPAADGTVT-------YSKDVDNAKAAASNVLAAAKNGDTISF 236
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G + + S + + + + +
Sbjct: 237 AGNNGTGITATAGTYTYNKASDSYSFSATAASKDSLLSMLAPNAGDSFTASVSIGGKAQD 296
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ T+ Y+D + + M + T T ++
Sbjct: 297 VNVSKDGTITTTDGKSLYLDQKGNLTQTGSGTTIAATWDNLMANTDTTGVDATSGHSAAT 356
Query: 360 AMEEMVSFIDTQIKCATAAA 379
A++ ++ D I A A
Sbjct: 357 AVKTIIKVKDMTITSAGGNA 376
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 39/291 (13%), Positives = 75/291 (25%)
Query: 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKK 221
T + +S K + V+ A +
Sbjct: 332 ATWDNLMANTDTTGVDATSGHSAATAVKTIIKVKDMTITSAGGNAQVATDKAYNDKYAAR 391
Query: 222 FKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR 281
T+ AA+ A A + + + S K A ++ +
Sbjct: 392 IVAGDTAAQADTAADTAEATATTTAVANTTADVSGVTISASQMASILKDKDFALNSGTTQ 451
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
+ T + D T + S
Sbjct: 452 YAVTGSTGAVTYDPDTDPAATGDIVSAYVDDAGTLTTDANKTVKYYAHTNGSVTNDSGSA 511
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ T+A + +D I +G++ +R+ +
Sbjct: 512 IYATEAGKLTTEASTAAETTANPLKALDDAISQIDKFRSSLGAVQNRLDSAVTNLNNTTT 571
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 572 NLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 622
>gi|255654328|ref|ZP_05399737.1| flagellin subunit [Clostridium difficile QCD-23m63]
gi|296452617|ref|ZP_06894311.1| flagellin protein [Clostridium difficile NAP08]
gi|296880971|ref|ZP_06904917.1| flagellin protein [Clostridium difficile NAP07]
gi|296258578|gb|EFH05479.1| flagellin protein [Clostridium difficile NAP08]
gi|296427992|gb|EFH13893.1| flagellin protein [Clostridium difficile NAP07]
Length = 290
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 75/203 (36%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN SA+ A+ ++ +++SSG+R+ AAD+AA +I++ M++ L
Sbjct: 3 VNTNVSALIANNQMGRNVSAQSKSMEKLSSGVRIKRAADDAAGLAISEKMRAQIKGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ G S V A+ + + +++ ++ + + I E+ QL+ ++
Sbjct: 63 GRNVQDGISVVQTAEGALEETGNILQRMRTLSVQSSNETNTAEERQKIADELLQLKDEVE 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ FNG+ L + + + N +I +
Sbjct: 123 RISSSIEFNGKKLLDGSSTEIRLQVGANFGTNVAGTTNNNNEIKVALVNTSSIMSKAGIT 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
+ + + + V
Sbjct: 183 SSTIASLNVDGASGTDAAKQMVS 205
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 54/137 (39%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T+ T + + + +T + N D + A ++MVS +D +K
Sbjct: 153 TNVAGTTNNNNEIKVALVNTSSIMSKAGITSSTIASLNVDGASGTDAAKQMVSSLDVALK 212
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ K+G+ +R+ ++ + + V R+ D D+ASE LS + Q +
Sbjct: 213 ELNTSRAKLGAQQNRLESTQNNLNNTIENVTAAESRIRDTDVASEMVNLSKMNILVQASQ 272
Query: 434 QALSIVNNSTARILSLF 450
L+ N +L L
Sbjct: 273 SMLAQANQQPQGVLQLL 289
>gi|9211052|gb|AAF85764.1| flagellin [Escherichia coli]
Length = 554
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 55/368 (14%), Positives = 106/368 (28%), Gaps = 9/368 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I L+ ++
Sbjct: 124 DRVSGQTQFNGVNVLSKDGSMKIQVGANDGETITIDL------KKIDSDTLNLAGFNVNG 177
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ L +K++ + V+ Y A +++ L +G +
Sbjct: 178 EGETANTAATLKDMVGLKLDNTGVTTAGVNRYIADKAVASSTDILNAVAGVDGSKVSTEA 237
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D G A P+ T S S + A+ G + + +
Sbjct: 238 DVGFGAAAPGTPVEYTYHKDTNTYTASASVDATQLAAFLNPEAGGTTAATVSIGNGTTAQ 297
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + D+ + L
Sbjct: 298 EQKVIIAKDGSLTAADDGAALYLDDTGNLSKTNAGTDTQAKLSDLMANNANAKTVITTDK 357
Query: 360 AMEEMVSF 367
+
Sbjct: 358 GTFTANTT 365
Score = 95.6 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 51/354 (14%), Positives = 97/354 (27%), Gaps = 1/354 (0%)
Query: 99 VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN 158
G + + L +A G++ +
Sbjct: 202 TTAGVNRYIADKAVASSTDILNAVAGVDGSKVSTEADVGFGAAAPGTPVEYTYHKDTNTY 261
Query: 159 GKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+T T G + KV + + A+ +
Sbjct: 262 TASASVDATQLAAFLNPEAGGTTAATVSIGNGTTAQEQKVIIAKDGSLTAADDGAALYLD 321
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
T +G +A + A + NTT S + A
Sbjct: 322 DTGNLSKTNAGTDTQAKLSDLMANNANAKTVITTDKGTFTANTTKFDGVDISVDASTFAN 381
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
++ V T + T + G S G D E +
Sbjct: 382 AVKNETYTATVGVTLPATYTVNNGTAASAYLVDGKVSKTPAEYFAQADG-TITSGENAAT 440
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ ++ + T+ +E A ++ +D I +G+I +R+ +
Sbjct: 441 SKAIYVSANGNLTTNTTSESEATTNPLAALDDAIASIDKFRSSLGAIQNRLDSAVTNLNN 500
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 501 TTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLQQG 554
>gi|251770880|gb|EES51466.1| flagellin domain protein [Leptospirillum ferrodiazotrophum]
Length = 275
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 35/224 (15%), Positives = 71/224 (31%), Gaps = 3/224 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N ++M+A L + L +R+SSG RV+ AD+ A ++I+Q M + +A
Sbjct: 6 INDNIASMNAQYNLNETQRALAKHINRLSSGYRVNSPADDPAGYAISQRMGGQVKSYAAS 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKS---IQSEITQLQSQLR 120
GSS + A + ++ ++ K + E L+S++
Sbjct: 66 IRNANDGSSLLQTANGALQTDNTIILKMRQLAIEAANSTYSPKDLKVLNQEYQHLKSEIT 125
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ + FNG L + S + + + +
Sbjct: 126 RIAKVTDFNGMKLLDGSHPDFKFQVGIYTTFSDRLHVKMGKVDANALGIGGTDILNRNDA 185
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
++ + + +T +
Sbjct: 186 KHSVDQLDKALDKINGLQGNIGAIQDRMEWTIRNLNTATTNVQA 229
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 32/122 (26%)
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ + + V +D + G IG+I R
Sbjct: 153 YTTFSDRLHVKMGKVDANALGIGGTDILNRNDAKHSVDQLDKALDKINGLQGNIGAIQDR 212
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + V+ + D D A E+ R + Q Q L+ N +
Sbjct: 213 MEWTIRNLNTATTNVQASRAGIRDVDFAGETARFTKRQILSQSGAAVLAQSNLIPQAAIK 272
Query: 449 LF 450
L
Sbjct: 273 LL 274
>gi|149928411|ref|ZP_01916649.1| flagellin-like protein [Limnobacter sp. MED105]
gi|149928467|ref|ZP_01916702.1| flagellin-like protein [Limnobacter sp. MED105]
gi|149822801|gb|EDM82052.1| flagellin-like protein [Limnobacter sp. MED105]
gi|149822863|gb|EDM82111.1| flagellin-like protein [Limnobacter sp. MED105]
Length = 287
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 75/206 (36%), Gaps = 3/206 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++++A + L L R+SSGLRV+ A D+AA +IA+ M++
Sbjct: 1 MLGINTNVASLTAQKNLSGSGMGLNNSIARLSSGLRVNSAKDDAAGLAIAERMQAQIRGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQS 117
G S + +A M K D + ++ TD ++ E T+L +
Sbjct: 61 DVAGRNANDGISLLQVADGAMGKISDNLQRMRELAVQAKNGTLNPTDRVNLNREYTELAN 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ I GS+FNG N + + + S + N + L
Sbjct: 121 EVDRIVTGSTFNGNNLFDAANQTLSFQVGTGNAVSDTLELNLTDDGLSTGNDLTTIMTNG 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVL 203
+ N ++
Sbjct: 181 AADIQTNLGAITDVANATTAIDTLDA 206
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 47/138 (34%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T V + L D M N A + + +D I
Sbjct: 150 TGNAVSDTLELNLTDDGLSTGNDLTTIMTNGAADIQTNLGAITDVANATTAIDTLDASID 209
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
T +G+ SR+ F + ++ GR++DAD A E+ L+ Q QQ
Sbjct: 210 AITGIRAVVGAGQSRLEQVAAFADVSSTNLQAARGRIMDADFAKETANLTRSQILQQAGT 269
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL +
Sbjct: 270 AMLAQANQLPNNVLSLLQ 287
>gi|326789958|ref|YP_004307779.1| flagellin domain protein [Clostridium lentocellum DSM 5427]
gi|326540722|gb|ADZ82581.1| flagellin domain protein [Clostridium lentocellum DSM 5427]
Length = 283
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A+ A + + I+ V ++SSGLR++ AAD+AA +I++ M++ L+
Sbjct: 3 INHNIAALRAFRYGKQISAQQMKVMTQLSSGLRINSAADDAAGLAISERMRAQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ ++ +++ I+ + ++Q E+ +L ++
Sbjct: 63 SRNAQDGISLIQTAEGATNEVHSILNRIRELAVQSANGTYTDEERNNMQFEVDELLKEIG 122
Query: 121 DIARGSSFNGENW 133
+I++ + FN +
Sbjct: 123 NISKNTEFNKMSL 135
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 36/116 (31%)
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
N + + + ID + + K+G+ +R+ +
Sbjct: 163 MELEIGSMTTNALGINGLSIATAGDAQNAIDVIDEAVNRTSKTRSKLGAYQNRLEHTINN 222
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + + R+ D DMA + L+ Q R+L+L +
Sbjct: 223 LENQAENLTAAESRIRDVDMAKAMMEYARLEILSQANTFIQMQSIKQGERVLALLK 278
>gi|172058450|ref|YP_001814910.1| flagellin domain-containing protein [Exiguobacterium sibiricum
255-15]
gi|171990971|gb|ACB61893.1| flagellin domain protein [Exiguobacterium sibiricum 255-15]
Length = 275
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ KL ++++SGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNITALNTHNKLSAATAAQGKSMEKLASGLRINKAGDDAAGLAISEKMRGQVRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S G S + A+ +++ D++ ++ D +I++E +L +++
Sbjct: 63 SRNAQDGISMIQTAEGALNETHDILQRMRELSVQASNGTNNTEDLAAIKAEGDELVTEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKS 148
IA + FNG++ + + I +
Sbjct: 123 RIASSTKFNGKDLISSAAVDVDLQIGAN 150
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 36/89 (40%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ IDT I + A +G+ +R+ + +K + + R+ D DMA E
Sbjct: 187 ASTAKIDTAIGKVSTARSYLGANQNRLEHTINNLKTSSENLTAAESRIRDVDMAKEMMNQ 246
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q A L+ N + +L L R
Sbjct: 247 TKNSILGQAAQAMLAQSNQTPQGVLQLLR 275
>gi|117923377|ref|YP_863994.1| flagellin domain-containing protein [Magnetococcus sp. MC-1]
gi|117607133|gb|ABK42588.1| flagellin domain protein [Magnetococcus sp. MC-1]
Length = 272
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A +KL + +L R+SSGLR++ A D+AA +I M S L+
Sbjct: 5 INTNVASLNAQRKLTKSSDDLSTTFARLSSGLRINSARDDAAGLAITNRMTSQIRGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S +A+ + + + + I+ +D ++ E+ Q+ ++++
Sbjct: 65 VRNANDGISVAQVAEGALDETTNALQRIRELAVQSANAIYNSSDRLNLDKEVDQMLAEIQ 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
I+ + FN N L + +
Sbjct: 125 RISDDTQFNKLNVLDGTYVGQKFQVGAFSGQTI 157
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 36/86 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + E ++ +D + + +G+I SR + + + + R+ DAD
Sbjct: 176 ISTQAGAEAALALVDNALDSISDVRANLGAIQSRFSAVIGNLSNVVENMSAARSRIQDAD 235
Query: 415 MASESTRLSALQTQQQLAVQALSIVN 440
+A+E+ L+ QQ L+ N
Sbjct: 236 IAAETANLTKTSILQQAGTAVLAQAN 261
>gi|125659361|dbj|BAF46880.1| flagellin [Escherichia coli]
Length = 349
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 3/180 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S A+ +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTAEGALSEINNNLQRIRELTVQASTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + A I + + +
Sbjct: 124 DRVSGQTQFNGVNVLSKNDSMKIQIGANDNQTISIGLQQIDSTTLNLKGFTVSGMADFSA 183
Score = 96.3 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 47/137 (34%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ ST + +T A A + + +D I
Sbjct: 213 TDTASNSTKYAVVDSATGKYMEATVAITGTAAAVTVGAAEVAGAATADPLKALDAAIAKV 272
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 273 DKFRSSLGAVQNRLDFAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 332
Query: 436 LSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 333 LAKANQVPQQVLSLLQG 349
>gi|120613067|ref|YP_972745.1| flagellar hook-associated protein 3 [Acidovorax citrulli AAC00-1]
gi|120591531|gb|ABM34971.1| flagellar hook-associated protein 3 [Acidovorax citrulli AAC00-1]
Length = 428
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 63/442 (14%), Positives = 126/442 (28%), Gaps = 35/442 (7%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+A + L L +Q+ ++SG RV A+D+ + A+ + + + A+
Sbjct: 15 NALRNLSQRQTALSNLQENLTSGKRVVRASDDPVAAAQAERAITRISRVQSEQRALENAR 74
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSF 128
+ V A++ + +A+D++ ++ I + D K+I +++ L+ QL D+
Sbjct: 75 NTVTQAESTLGQAVDIVQELRQLIVSAGGGSLKPQDRKTIMNQVQGLREQLSDMVNRKDT 134
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
NG L + + Q + L + +R G
Sbjct: 135 NGLPLLGALGSALAPFLGPQSGSPDYSFAGLPGQASGSATSLPLSLDGESAFMFQPKRDG 194
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
+ + + L V + + + + G T T
Sbjct: 195 VYTASVSDIPTGRALTTDGVKAVNTALVTGDDYQIVFSGVGPGATPGTTTATYTITNTTT 254
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
V + I
Sbjct: 255 GVASAPVTVPDFPADKPVSIAVTGIPGVTFNITGT------------------------- 289
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ + S L S+ +++ A+ + ++ I
Sbjct: 290 --PVKQNDGTYSFSPANGDTISLKPSASIFSSIDQAVRDIGGASNSNAAAQAVGQALNNI 347
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D ++ G G + +R D +E R D DM + QT
Sbjct: 348 DIGLERIHNMRGYAGELLNRADRITGDQGKRADQLEADRSRAEDLDMIKGISDFQNNQTG 407
Query: 429 QQLAVQALSIVNNSTARILSLF 450
Q A+Q+ + V LSLF
Sbjct: 408 YQAALQSYAQVQK-----LSLF 424
>gi|301165450|emb|CBW25021.1| putative flagellin FliC [Bacteriovorax marinus SJ]
Length = 277
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 31/203 (15%), Positives = 76/203 (37%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++A + L ++ ++++SG R++ A+D+AA +I++ +K++
Sbjct: 5 INTNVQSLAAQRSLGNVKEEQGTNLEKMASGSRINKASDDAAGLAISEKLKANIRGSQQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
G G S + A+ G+++ +++ ++ + + E L ++
Sbjct: 65 KRNAGDGISMIQTAEGGLNEVSNILVRLRELSVQAASDTVGDQERQFSDLEFQNLVQEVD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG + L + ++ + R + + + S
Sbjct: 125 RIAGSTKFNGRDLLTGEGETADFQVGIMNDDFNDRISYRPQDSAATTDAIGIAGLSVGSK 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
E +D +
Sbjct: 185 EGAQENLENIDAALNKINGNRAS 207
Score = 94.4 bits (232), Expect = 4e-17, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 36/95 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
K +E + ID + +G++ +R+ + + + + R+ D D
Sbjct: 181 VGSKEGAQENLENIDAALNKINGNRASLGALQNRLQSTISNLDVKTENLSSANSRIRDTD 240
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
+A S+ L+ + L+ N+S L L
Sbjct: 241 IAQTSSELTKANILTSASTSVLAQANSSQNAALKL 275
>gi|301018227|ref|ZP_07182742.1| bacterial flagellin [Escherichia coli MS 69-1]
gi|300399814|gb|EFJ83352.1| bacterial flagellin [Escherichia coli MS 69-1]
Length = 548
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 50/387 (12%), Positives = 107/387 (27%), Gaps = 6/387 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSTSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D + + + D T + +
Sbjct: 124 DRVSGQTQFNGVNVLSKDGSMK-IQVGANDGETITIDLKKIDSDTLGLNGFNVNGKGETA 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+T T + + AS + A
Sbjct: 183 NTAATLKDMSGFTAAAAPGGTVGVTQYTDKSAVASSVDILNAVAGTDGNKVTTSADVGFG 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + + +A + ++ + + + + +
Sbjct: 243 TPAAAVTYTYNKDTNSYSAASDDISSANLAAFLNPQAGDTTKATVTIGGKDQDVNIDKSG 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + + D++ L K + + T +
Sbjct: 303 NLTAADDGAVLYMDATGNLTKNNAGGDTQATLAKLATATGAKAATIQTDKGTFTSDGTTF 362
Query: 360 AMEEMVSFIDTQIKCA--TAAAGKIGS 384
M +T +G+
Sbjct: 363 DGASMSIDANTFANAVKNDTYTATVGA 389
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/315 (11%), Positives = 82/315 (26%)
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
S+ + + + + + +
Sbjct: 234 TTSADVGFGTPAAAVTYTYNKDTNSYSAASDDISSANLAAFLNPQAGDTTKATVTIGGKD 293
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ + K +++ D + T + A A +
Sbjct: 294 QDVNIDKSGNLTAADDGAVLYMDATGNLTKNNAGGDTQATLAKLATATGAKAATIQTDKG 353
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ T S S+ A+ + N K + T
Sbjct: 354 TFTSDGTTFDGASMSIDANTFANAVKNDTYTATVGAKTYSVTTGSAAADTAYMSNGVLSD 413
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
E + +V TD ++ + + ++ +D I
Sbjct: 414 TPPTYYAQADGSITTTEDAAAGKLVYKGSDGKLTTDTTSKAESTSDPLAALDDAISQIDK 473
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G++ +R+ + + + R+ DAD A+E + +S Q QQ L+
Sbjct: 474 FRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLA 533
Query: 438 IVNNSTARILSLFRG 452
N ++LSL +G
Sbjct: 534 KANQVPQQVLSLLQG 548
>gi|330911731|gb|EGH40241.1| flagellar biosynthesis protein FliC [Escherichia coli AA86]
Length = 349
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 3/180 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S A+ +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTAEGALSEINNNLQRIRELTVQASTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + A I + + +
Sbjct: 124 DRVSGQTQFNGVNVLSKNDSMKIQIGANDNQTISIGLQQIDSTTLNLKGFTVSGMADFSA 183
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 48/137 (35%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ ST + ++T A A + + +D I
Sbjct: 213 TDTASNSTEYAVVDSATGKYMEATVLITGTAAAVTVGAAEVAGAATADPLKALDAAIAKV 272
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 273 DKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 332
Query: 436 LSIVNNSTARILSLFRG 452
LS N ++LSL +G
Sbjct: 333 LSKANQVPQQVLSLLQG 349
>gi|300904811|ref|ZP_07122637.1| bacterial flagellin [Escherichia coli MS 84-1]
gi|301305264|ref|ZP_07211361.1| bacterial flagellin [Escherichia coli MS 124-1]
gi|300403238|gb|EFJ86776.1| bacterial flagellin [Escherichia coli MS 84-1]
gi|300839470|gb|EFK67230.1| bacterial flagellin [Escherichia coli MS 124-1]
gi|315257246|gb|EFU37214.1| bacterial flagellin [Escherichia coli MS 85-1]
Length = 349
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 3/180 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S A+ +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTAEGALSEINNNLQRIRELTVQASTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + A I + + +
Sbjct: 124 DRVSGQTQFNGVNVLSKNDSMKIQIGANDNQTISIGLQQIDSTTLNLKGFTVSGMADFSA 183
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 49/137 (35%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ ST + ++T A + A + + +D I
Sbjct: 213 TDTASNSTKYAVVDSATGKYMEATVVITGTAAAVTVGAAEVARAATADPLKALDAAIAKV 272
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 273 DKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 332
Query: 436 LSIVNNSTARILSLFRG 452
LS N ++LSL +G
Sbjct: 333 LSKANQVPQQVLSLLQG 349
>gi|56383043|emb|CAE53943.1| flagellin [Escherichia coli]
Length = 349
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 3/180 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S A+ +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTAEGALSEINNNLQRIRELTVQASTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + A I + + +
Sbjct: 124 DRVSGQTQFNGVNVLSKNDSMKIQIGANDNQTISIGLQQIDSTTLNLKGFTVSGMADFSA 183
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 48/137 (35%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ ST + ++T A A + + +D I
Sbjct: 213 TDTASNSTKYAVVDSATGKYMEATVVITGTAAAVTVGAAEVAGAATADPLKALDAAIAKV 272
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 273 DKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 332
Query: 436 LSIVNNSTARILSLFRG 452
LS N ++LSL +G
Sbjct: 333 LSKANQVPQQVLSLLQG 349
>gi|218695530|ref|YP_002403197.1| Flagellin [Escherichia coli 55989]
gi|331647516|ref|ZP_08348608.1| bacterial flagellin N-terminus subfamily [Escherichia coli M605]
gi|331657968|ref|ZP_08358930.1| bacterial flagellin N-terminus subfamily [Escherichia coli TA206]
gi|331683475|ref|ZP_08384076.1| bacterial flagellin N-terminus subfamily [Escherichia coli H299]
gi|6009833|dbj|BAA85081.1| flagellin [Escherichia coli]
gi|30059850|gb|AAP13297.1| FliC [Escherichia coli]
gi|56383039|emb|CAE53941.1| flagellin [Escherichia coli]
gi|218352262|emb|CAU98018.1| Flagellin [Escherichia coli 55989]
gi|331043240|gb|EGI15378.1| bacterial flagellin N-terminus subfamily [Escherichia coli M605]
gi|331056216|gb|EGI28225.1| bacterial flagellin N-terminus subfamily [Escherichia coli TA206]
gi|331079690|gb|EGI50887.1| bacterial flagellin N-terminus subfamily [Escherichia coli H299]
Length = 349
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 3/180 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S A+ +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTAEGALSEINNNLQRIRELTVQASTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + A I + + +
Sbjct: 124 DRVSGQTQFNGVNVLSKNDSMKIQIGANDNQTISIGLQQIDSTTLNLKGFTVSGMADFSA 183
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 48/137 (35%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ ST + ++T A A + + +D I
Sbjct: 213 TDTASNSTKYAVVDSATGKYMEATVVITGTAAAVTVGAAEVAGAATADPLKALDAAIAKV 272
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 273 DKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 332
Query: 436 LSIVNNSTARILSLFRG 452
LS N ++LSL +G
Sbjct: 333 LSKANQVPQQVLSLLQG 349
>gi|238782810|ref|ZP_04626839.1| Flagellin [Yersinia bercovieri ATCC 43970]
gi|238716233|gb|EEQ08216.1| Flagellin [Yersinia bercovieri ATCC 43970]
Length = 380
Score = 121 bits (301), Expect = 4e-25, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 88/300 (29%), Gaps = 3/300 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L +L +R+SSGLR++ A D+AA +I+ + LS
Sbjct: 4 VINTNSLSLVAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTASINGLSQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ D + I+ +D +SIQ EI +++
Sbjct: 64 ASRNANDGISLAQTTEGALNEVNDNLQNIRRLTLQAQNGTNSDSDRQSIQDEIDARLAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FNG L D S + I + + +
Sbjct: 124 NRISEQTEFNGVKVLSKDQSLSIQVGSNDGQTISIDLSKMDATTLNMADFNVASSESSVE 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + K + + + + +F
Sbjct: 184 GFTIKQVSAGMTLEGKDGTDDVSVTLTATDIAAMEEEAFGVGGSGTVHMITDDTTGDISF 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ N T + + A+ + AT +++
Sbjct: 244 VAIGQKSDGTEVSINLDTTFNFTDTEVTFAAGTAASDTDLEMIAGGTSTQLATIDEALSM 303
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/390 (11%), Positives = 94/390 (24%), Gaps = 22/390 (5%)
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
+ + S + A +S + + D + Q+ + + +
Sbjct: 13 VAQNNLNKSQSSLGTAIERLSSGLRI------------NSAKDDAAGQAISNRFTASING 60
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+++ S + + + + R T
Sbjct: 61 LSQASRNANDGISLAQTTEGALNEVNDNLQNIRRLT----------LQAQNGTNSDSDRQ 110
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ E + V D S +I T S K T +
Sbjct: 111 SIQDEIDARLAEINRISEQTEFNGVKVLSKDQSLSIQVGSNDGQTISIDLSKMDATTLNM 170
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A ++G + + + + +
Sbjct: 171 ADFNVASSESSVEGFTIKQVSAGMTLEGKDGTDDVSVTLTATDIAAMEEEAFGVGGSGTV 230
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ T S + + T ++TD
Sbjct: 231 HMITDDTTGDISFVAIGQKSDGTEVSINLDTTFNFTDTEVTFAAGTAASDTDLEMIAGGT 290
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ ID + +G+ +R + + ++ R++DAD ASE +
Sbjct: 291 STQLATIDEALSMVDGLRSSLGASQNRFASVISNLNSTVNNLQDARSRILDADFASEVSE 350
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
+S Q + L+ N +LSL R
Sbjct: 351 MSRANILQSAGISVLAQANQVPQNVLSLLR 380
>gi|114054915|gb|ABI50057.1| FlaA [Clostridium botulinum]
Length = 264
Score = 121 bits (301), Expect = 4e-25, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 71/178 (39%), Gaps = 3/178 (1%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L S
Sbjct: 1 NLNAMNAXRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQASRN 60
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIA 123
S + A+ +++ ++ ++ G D +I++EIT+L +++ I+
Sbjct: 61 SQDSISLIQTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEINRIS 120
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ + FN + L I + + T + + +
Sbjct: 121 QQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLTIGDMSAKTLGVSGVSVSDASKATDS 178
Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 41/112 (36%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 153 TIGDMSAKTLGVSGVSVSDASKATDSIATIDKALGTVSTERAKLGANQNRLEHTINNLNT 212
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ ++ R+ D DMA E S Q A L+ N + +L L
Sbjct: 213 SSENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLL 264
>gi|83647506|ref|YP_435941.1| flagellin-like protein [Hahella chejuensis KCTC 2396]
gi|83635549|gb|ABC31516.1| Flagellin and related hook-associated protein [Hahella chejuensis
KCTC 2396]
Length = 683
Score = 121 bits (301), Expect = 4e-25, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 67/160 (41%), Gaps = 3/160 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L + + R+SSGLR++ A D+AA +I+ S LS
Sbjct: 5 INTNIASINAQRNLNNSQSANQTALARLSSGLRINSARDDAAGLAISTRFTSQVRGLSVA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
G S A+ + + + I++ G D K++ E+ QL +++
Sbjct: 65 IRNAGDAVSLSQTAEGALGAMSENLLRIRDLALQSANATNSGLDRKALNEEVRQLLQEIK 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
++ ++FNG L T I + S G
Sbjct: 125 RVSDQTNFNGTKLLDGTFTDVTFQIGANEGESVTFGIEGA 164
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/323 (10%), Positives = 86/323 (26%)
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ + + G S S + + G+ +
Sbjct: 350 ISRDGSAIGLDTTTGNIGNAGLSVGSFSGNNSGAISDQVDANPFAAGDLVINGVPIGPTQ 409
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ D + V + D V + + TI + ++ + N
Sbjct: 410 TNFDTSSSTQTDSSAIAKAVAINKVSDQTGVVAEVNDTIQNATALVTGSAQNFNFQINGV 469
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ V + + + + A ++Y + + ++ + ++ T
Sbjct: 470 QINISYGSNDTVADVQRTVITAINNKSGQTGVQAEAFGSSYRMIADDGRNIQISNASTTT 529
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
S G + K + + + + +
Sbjct: 530 SLIGLGTVDTVTASTITLLSAGAIELDTLTGQIEKSGFEVGTYGSNSTGQLVQNIDISSV 589
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+S +D + +G+I +R + + + R+ DAD A+E
Sbjct: 590 DGAILALSAVDNALNTINFQRANLGAIQNRFESTISNQAIASENLTAANSRIRDADFAAE 649
Query: 419 STRLSALQTQQQLAVQALSIVNN 441
+ LS Q Q + L+ N
Sbjct: 650 TAELSRTQVLQSAGLSILAQANA 672
>gi|24214717|ref|NP_712198.1| endoflagellar filament core protein [Leptospira interrogans serovar
Lai str. 56601]
gi|45657753|ref|YP_001839.1| flagellin protein [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|24195710|gb|AAN49216.1| endoflagellar filament core protein [Leptospira interrogans serovar
Lai str. 56601]
gi|45600993|gb|AAS70476.1| flagellin protein [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
Length = 281
Score = 121 bits (301), Expect = 4e-25, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 68/158 (43%), Gaps = 3/158 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A+++ + L+ N + + +SSG+R++ A D+A+ ++++ M++ L
Sbjct: 3 INHNLAAINSHRVLKFQNNEVAKNMETLSSGMRINRAGDDASGLAVSEKMRTQVKGLRQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + + + + D++ I+ D + IQ E++QL ++
Sbjct: 63 ERNTEDGMSLIQTTEGYLQETNDIIQRIRVLAIQSSNGIYSAEDRQMIQVEVSQLVDEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN 158
IA + FN L+ D + + + +
Sbjct: 123 RIASQAEFNKMALLQGDFARGSRTSSMWFHIGPNQHQR 160
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 35/96 (36%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + + +D + +G+ +R+ + + + ++ R+ D DM
Sbjct: 186 STAEFANDAIGTLDDALMKINKQRANLGAYFNRLEHASKGLMVAYENIQASESRIRDTDM 245
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A E+ + Q Q L+ N +L L R
Sbjct: 246 AEETVAFTKNQILVQSGTAMLAQANVRPQSVLQLLR 281
>gi|293410282|ref|ZP_06653858.1| flagellin [Escherichia coli B354]
gi|291470750|gb|EFF13234.1| flagellin [Escherichia coli B354]
Length = 561
Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 49/374 (13%), Positives = 106/374 (28%), Gaps = 11/374 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSQSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITI--------DLKKIDSSTLKLTGFNV 175
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + +T + +T
Sbjct: 176 NGKAAVDNAKATDANLTTAGFTQGVVDSNGNSTWTKSTTTNFDAATAVNVLAAVKDGSTI 235
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + +A ++T + + + A A G S
Sbjct: 236 NYTGTGNGLGIAATSAYTYHDSTKSYTFDSTGAAVAGAASSLQGTFGTDTNTAKITIDGS 295
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ K+ +T +T + K+ + L + +
Sbjct: 296 AQEVNIAKDGKITDTDGKALYIDSTGNLTKNGSDTLIQATLNDVLTGANSVDDTRIDFDS 355
Query: 360 AMEEMVSFIDTQIK 373
M + +++ +
Sbjct: 356 GMSVTLDKVNSTVD 369
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/380 (12%), Positives = 106/380 (27%), Gaps = 5/380 (1%)
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+ ++ + + + + + + +A + N+ T
Sbjct: 182 DNAKATDANLTTAGFTQGVVDSNGNSTWTKSTTTNFDAATAVNVLAAVKDGSTINYTGTG 241
Query: 138 LGSSTASIAKSVI-----GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
G A+ + V T + ++
Sbjct: 242 NGLGIAATSAYTYHDSTKSYTFDSTGAAVAGAASSLQGTFGTDTNTAKITIDGSAQEVNI 301
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
K+ K + + + AT + A + + + + V L
Sbjct: 302 AKDGKITDTDGKALYIDSTGNLTKNGSDTLIQATLNDVLTGANSVDDTRIDFDSGMSVTL 361
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+ + T + + + + + + N T N++ + N V G
Sbjct: 362 DKVNSTVDITGASISAAAMTNELTGKAYTVVNGAESYAVATNNTVKTTADAKNVYVDASG 421
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
T D + V T+ ++ A ++ +D I
Sbjct: 422 KLTTDDKATVTETYHEFANGNIYDDKGAAVYAAADGSLTTETTSKSEATANPLAALDDAI 481
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+G+I +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 482 SQIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAG 541
Query: 433 VQALSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 542 NSVLAKANQVPQQVLSLLQG 561
>gi|157691932|ref|YP_001486394.1| flagellin [Bacillus pumilus SAFR-032]
gi|157680690|gb|ABV61834.1| flagellin [Bacillus pumilus SAFR-032]
Length = 305
Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 41/120 (34%)
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
V L+ ++ + +D IK + K+G++ +R+
Sbjct: 186 ADGTLKADHAVADIDVTQFADPTAAGALSFDDQLDIVDGAIKQVSDQRSKLGAVQNRLEH 245
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + + R+ D DMA E + + Q + L+ N +L L R
Sbjct: 246 TINNLGASGENLTAAESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQQPQNVLQLLR 305
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 64/146 (43%), Gaps = 10/146 (6%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ +L N + +++SSGL+++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTLNRLSANNGASQKNMEKLSSGLKINRAGDDAAGLAISEKMRGQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS----KSIQSEITQLQSQL 119
+ G S + A+ +++ ++ ++ + GT +IQ EI L ++
Sbjct: 63 TKNAQDGISLIQTAEGALTETHSILQRVRELVVQAGNTGTQDGTDLGAIQEEIANLVQEI 122
Query: 120 ------RDIARGSSFNGENWLRTDLG 139
I+ + FNG+ L
Sbjct: 123 GDGSGKNGISDRTEFNGKKLLDGTFS 148
>gi|114054913|gb|ABI50056.1| FlaA [Clostridium botulinum]
Length = 256
Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 71/180 (39%), Gaps = 3/180 (1%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L S
Sbjct: 1 NHNLNAMNARRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQAS 60
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
S + A+ +++ ++ ++ G D +I++EIT+L +++
Sbjct: 61 RNSQDSISLIQTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEINR 120
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I++ + FN + L I + + T + + +
Sbjct: 121 ISQQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLTIGDMSAKTLGVSGVSVSDASKATDS 180
Score = 77.1 bits (187), Expect = 6e-12, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 32/89 (35%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T + + ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 157 GDMSAKTLGVSGVSVSDASKATDSIATIDKALGTVSTERAKLGANQNRLEHTINNLNTSS 216
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ ++ R+ D DMA E S
Sbjct: 217 ENLQAAESRVRDVDMAKEMMAFSKNNILN 245
>gi|42524710|ref|NP_970090.1| flagellin [Bdellovibrio bacteriovorus HD100]
gi|39576920|emb|CAE78149.1| flagellin [Bdellovibrio bacteriovorus HD100]
gi|48927379|emb|CAG38106.1| flagellin [Bdellovibrio bacteriovorus]
Length = 277
Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 34/202 (16%), Positives = 77/202 (38%), Gaps = 3/202 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +A++A + L + +++SG R++ AAD+AA +I++ +K+ + +
Sbjct: 5 VTTNIAALNAQRNLAGSQRIVNDSMAKLASGSRINKAADDAAGLAISEGLKAQIRSAAQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
G S + A+ G+++ +++ ++ T+ + E+TQL S+++
Sbjct: 65 QRNANDGISMIQTAEGGLNEVGNIIVRLRELAIQSASDTVGETERGMLNKEVTQLTSEMQ 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ +++ L + R + L E + S
Sbjct: 125 RIAKSTTWGTTKLLDGSAPKFDFQVGIGNDDFADRISFNAGEHAATLDALGLEGLDFSSK 184
Query: 181 TDGTERYGLLDRNHKIKVEPQV 202
LD +
Sbjct: 185 EGAQTALKRLDDAQTNVSGTRA 206
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 38/96 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ K + + +D + +G++ +R+ D + + ++ + R+ D D
Sbjct: 181 FSSKEGAQTALKRLDDAQTNVSGTRAYLGALQNRLTSTVDNLGVTQENLSAANSRIRDTD 240
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+A+ S+ + Q LS N + L L
Sbjct: 241 VATASSEMVRNNILLQAGTSILSQANQANQLALKLI 276
>gi|213583536|ref|ZP_03365362.1| flagellin [Salmonella enterica subsp. enterica serovar Typhi str.
E98-0664]
Length = 201
Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 3/148 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAK 147
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGAN 151
>gi|315127344|ref|YP_004069347.1| flagellin domain-containing protein [Pseudoalteromonas sp. SM9913]
gi|315015858|gb|ADT69196.1| flagellin domain-containing protein [Pseudoalteromonas sp. SM9913]
Length = 389
Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 45/381 (11%), Positives = 92/381 (24%), Gaps = 25/381 (6%)
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
G ++Q E+ LQ +L IA + F G + L G+ + + +
Sbjct: 8 SANGSNDADARAALQKEVGALQQELTRIAETTKFGGTSLLDGSFGTKQFQVGSNANETIN 67
Query: 155 RDDNGKVQIT-------------------------TIDYYLDPETVLLDSSTDGTERYGL 189
+ + +TV ++
Sbjct: 68 VSLRDVSADAIGANEIKGGATSTVSALGDVQTVALSANVATSAQTVNINGVDIEVAASSG 127
Query: 190 LDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIP 249
+ + I G
Sbjct: 128 AAAIADKINSSGAGVNAQAKLTTTIAGIDASSSSTIEIKKGGTAIDKYDLGTFGGDMARL 187
Query: 250 VPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+GS S + G D ++ S G + +
Sbjct: 188 AKDMQEDGYDAVYDEAAGSISFTATDIDGIDVTGAGDTSGFTIENKAVASTAGSLSLSAE 247
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
++ + T +D + + + + ++ ID
Sbjct: 248 LNLSSADKIGISGTKVDEIFGSDASTIDSTGGSSALTSVETIDISGATSAGAQNAINTID 307
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ A +G++ +R + + + V R+ D D A+E+ +L+ Q Q
Sbjct: 308 AALAQIDAQRADLGAVQNRFGFTIANLANVSENVSASKSRIEDTDYAAETAKLTKNQIMQ 367
Query: 430 QLAVQALSIVNNSTARILSLF 450
Q L+ N LSL
Sbjct: 368 QAGTTILAQSNQLPQAALSLL 388
>gi|254500522|ref|ZP_05112673.1| Bacterial flagellin N-terminus domain protein [Labrenzia alexandrii
DFL-11]
gi|222436593|gb|EEE43272.1| Bacterial flagellin N-terminus domain protein [Labrenzia alexandrii
DFL-11]
Length = 496
Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 79/495 (15%), Positives = 151/495 (30%), Gaps = 45/495 (9%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I+ + + L+ E Q+R+++GL+V+ A DN + AQ + G L
Sbjct: 1 MPDIVLSSAVRDNLLSLKKTAAFQETTQNRLATGLKVNSALDNPNSYFTAQSLNDRAGDL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQ 118
S + D +G + A G++ ++ + K + + + + Q
Sbjct: 61 SNLLDNMGQAVQTLRAADDGITSITKLVESAKAIANQALQTSSEYERRQFAVQYNAILEQ 120
Query: 119 LRDIARGSSFNGENWLRTDLGS--STASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+ D+A+ S + G+N L + + + D + T D T
Sbjct: 121 IEDMAKDSGYKGKNLLAGAGNELEVIFNEDSTSNLTVNPVDFTDTTLDTGLNLDDLATGA 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+S+ ++ + + + T + +
Sbjct: 181 SGTSSFNMYGGSAQLTLTGLQASSNLTDLAAFADNNHVMVTDGSTTTTLTVGVDIVTVQD 240
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
+ T S A G T +
Sbjct: 241 YVDALDDLSGVHASFDETTDSITLVTGLNSNITVTKDANGGGSTSDGGITAGATTLTATA 300
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTT-------------------------------- 324
++S S K G+T D
Sbjct: 301 LSSTATLITSGGFKAGDTITITDGNGFEPASLEIDEETTVDDLVKLINNVKGLDATFSGG 360
Query: 325 ---------LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
D D + + + A + +E ++ I+ +
Sbjct: 361 SISLIGEVSFDITSDNADFNRMRLASTSGTVALGATASEFKTDTDIERVLQAINASLDEL 420
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+A +G+ S + ++ DF + + + +E G G L ADM E + ALQT+QQL+ A
Sbjct: 421 RNSARSLGTALSTVEIRTDFTQNIINTLEVGAGDLTIADMNEEGANMLALQTRQQLSSTA 480
Query: 436 LSIVNNSTARILSLF 450
LS+ N + +LSLF
Sbjct: 481 LSLANQAEQSVLSLF 495
>gi|51894110|ref|YP_076801.1| flagellin [Symbiobacterium thermophilum IAM 14863]
gi|51857799|dbj|BAD41957.1| flagellin [Symbiobacterium thermophilum IAM 14863]
Length = 275
Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 81/209 (38%), Gaps = 3/209 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + L + + +++SSG RV+ AAD+AA ++++ M++ L+
Sbjct: 3 INTNLAALNAWRALTINHGAMTKSLEKLSSGYRVNRAADDAAGLAVSEKMRAQIRGLNMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
G S + A+ G K D++ ++ D + + E QL ++
Sbjct: 63 VRNAQDGVSLIQTAEGGAQKIQDMLQRMRELAVQAASDTLDDPDRQLLNKEFAQLIEEIE 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A ++FN + L D S+T I D D L + + +
Sbjct: 123 RTANSTTFNEKELLNADAASATFDIHVGPGADPDNDVITLQMADLTDTGLKISELTISTK 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+D T LD + +
Sbjct: 183 SDATTAISTLDNAIDTVSSTRATFGAYQN 211
Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 52/139 (37%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
N T + D ++ + + + + K +S +D I
Sbjct: 137 NADAASATFDIHVGPGADPDNDVITLQMADLTDTGLKISELTISTKSDATTAISTLDNAI 196
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++ G+ +R+ + +K+ + + R+ DADMA E + Q QQ +
Sbjct: 197 DTVSSTRATFGAYQNRLEGAIETLKIQAENLTAAESRIRDADMALEMATFTKYQILQQAS 256
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N ST ILSL R
Sbjct: 257 TAMLAQANMSTQSILSLLR 275
>gi|146296690|ref|YP_001180461.1| flagellin domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410266|gb|ABP67270.1| flagellin domain protein [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 273
Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++ +L N L +++SSG+R++ A D+AA +I++ M+ L+
Sbjct: 3 INNNIQALNTYNRLTINNDMLSKSLEKLSSGMRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+ +++ ++ ++ D ++Q+E+ QL++++
Sbjct: 63 IRNAQDAISLIQTAEGALNETHSILQRMRELAVQAANDTNTDDDRNALQAEVDQLKAEID 122
Query: 121 DIARGSSFNGENWLRT 136
IA + FN + L
Sbjct: 123 RIASTTQFNTKTLLNG 138
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 38/97 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + +S ID IK + K G+ +R+ + + + + + R+ D D
Sbjct: 177 VAAQTSANKAISTIDNAIKYVSEVRAKFGAYQNRLEHTINNLGVASENLTAAESRIRDVD 236
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + Q A L+ N +L L R
Sbjct: 237 MAKEMMAFTKNNILMQAATAMLAQANQLPQAVLQLLR 273
>gi|307691096|ref|ZP_07633542.1| flagellin domain-containing protein [Clostridium cellulovorans
743B]
Length = 143
Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N +AM+A + + N N +++SSGLR++ A D+AA SI++ M++ L+ S
Sbjct: 1 HNLNAMNAQRNMGINNGNAAKSMEKLSSGLRINRAGDDAAGLSISEKMRAQIRGLNQASR 60
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDI 122
G S + A+ +++ ++ ++ D +I+SE+ L +++ I
Sbjct: 61 NAQDGISLIQTAEGALNETQSILQRMRELAVQASNDTNVAVDRSAIKSELDTLTTEIDRI 120
Query: 123 ARGSSFNGENWLRTD 137
A+ + FN +N L
Sbjct: 121 AKTTQFNEKNLLTGS 135
>gi|260899316|ref|ZP_05907711.1| polar flagellin E [Vibrio parahaemolyticus AQ4037]
gi|308110204|gb|EFO47744.1| polar flagellin E [Vibrio parahaemolyticus AQ4037]
Length = 374
Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 70/194 (36%), Gaps = 3/194 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN +AM + L Q +SSG R++ A+D+AA I+ + +
Sbjct: 1 MVSLNTNVAAMMTQRHLSQAADQNVESQRNLSSGYRINSASDDAAGLQISNTLHVQTRGI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
S A+ + ++ D++ +++ D KS+Q E+ LQ
Sbjct: 61 DVALRNAHDAYSVAQTAEGALHESSDILQRLRSLGLQAANGSHEQDDRKSLQQEVIALQD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L +A ++F +N GS + I + + N + I + L
Sbjct: 121 ELDRVAITTTFADKNLFNGSYGSQSFHIGANANSISLALRNMRTHIPEMGGQHYLGDSLD 180
Query: 178 DSSTDGTERYGLLD 191
+
Sbjct: 181 KDWRVTRDNQQFAF 194
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/371 (10%), Positives = 89/371 (23%)
Query: 80 GMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
++ + M T ++ A + +++ S + S R
Sbjct: 3 SLNTNVAAMMTQRHLSQAADQNVESQRNLSSGYRINSASDDAAGLQISNTLHVQTRGIDV 62
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + + + S + +
Sbjct: 63 ALRNAHDAYSVAQTAEGALHESSDILQRLRSLGLQAANGSHEQDDRKSLQQEVIALQDEL 122
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+V + + + + + A L +
Sbjct: 123 DRVAITTTFADKNLFNGSYGSQSFHIGANANSISLALRNMRTHIPEMGGQHYLGDSLDKD 182
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + + + + V + T + A V H
Sbjct: 183 WRVTRDNQQFAFEYQDNEGQAQSKVLTLKVGDNLEEVATYINAQQSVVDASVTQDHQLQF 242
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
ST K + + + + + + +D IK +
Sbjct: 243 FISTLNAPEGITWKGNFADEMDIGSGELVTVDDLDMSTVGGAQLAIGVVDAAIKYVDSHR 302
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+IG +R+ D + + +V + GR+ D D A EST + Q Q L+
Sbjct: 303 SEIGGFQNRVSGTIDNLNTINRSVSESKGRIRDTDFARESTVMVRSQVLQDATTALLAQA 362
Query: 440 NNSTARILSLF 450
+ L L
Sbjct: 363 KQRPSSALGLL 373
>gi|257095352|ref|YP_003168993.1| flagellar hook-associated protein 3 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047876|gb|ACV37064.1| flagellar hook-associated protein 3 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 446
Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats.
Identities = 45/433 (10%), Positives = 125/433 (28%), Gaps = 7/433 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN + + ++ L +Q+++SS R+ AD+ + A + G +
Sbjct: 3 ISTNQIYSAGVRSIQRNQEQLAKLQNQISSDRRMLTPADDPVASARALTITQAKGLTAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQSQLR 120
+ S ++ + + ++ D++ + ++++ +D ++I +E+ ++
Sbjct: 63 VENQRDASDRLGLVDSQLTSLTDLLQSARSRVVQASNTILGDSDRQAIAAELAARFDEML 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + G+ +T + + + + + S
Sbjct: 123 GIANSRNAQGDYLFAGYQSETTPFARSAAVSPASSSISYFGDDGQQLLQVATSQQMATSV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + N + ++ + + + T
Sbjct: 183 AGSELFMNVPEGNGTFAMTAGRTVTGSPNLGSGLMDSGSVLDQAMWRNALNTFPWQGTES 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ I V + TS P+ A + A +
Sbjct: 243 RGLQIQFSSVAGVS----QYQLFDTSTPAPPAAALPPIAVSDPQPFTPGMAVRLATTAPP 298
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
A+V + D ++ T+ + + L ++T
Sbjct: 299 AAVATDFGAQVVISGSPADDDAFTIKPSINKSVFQTMQEIIDLLQAPLASSTARTAFSGD 358
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ++ +D + + +G+ + + ++ + L D D A +
Sbjct: 359 LAAHLTNLDQALGNVSRVQSSVGARLQELEALSSNASAVDIQYQQTLSDLQDLDYAQAIS 418
Query: 421 RLSALQTQQQLAV 433
+ Q + A
Sbjct: 419 DFTRQQVALEAAQ 431
>gi|318604267|emb|CBY25765.1| flagellin protein FlaA [Yersinia enterocolitica subsp. palearctica
Y11]
Length = 433
Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats.
Identities = 56/452 (12%), Positives = 131/452 (28%), Gaps = 24/452 (5%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI A A++ L ++S+GLR+ A D+AA IA + + +
Sbjct: 3 LSINDQSQAFIAAKALNKSQNMYNKSTSQLSTGLRILSAKDDAAGSQIAAGLNAAITGQN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
S+ ++ A ++ + +++ +K T D ++ +E L +
Sbjct: 63 VALRNNSQSSAMLEAANGALAGSDGILNRMKELATQAANATNGAEDRAALNAEFKSLGEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L+ ++F GK+ T +++
Sbjct: 123 LQSTLEKTTFGDGTLFAAG---------------------GKLDGKLTFQTGASATDVIE 161
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + V Q + ++ +S + K+ A A
Sbjct: 162 IDLSKGVKGLMDTVAGTATVGDQNGNAVQKELFKLEKALSDAEAKVQPHKNATAIAKAEY 221
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ A A + + V + + +
Sbjct: 222 KAEFDAEMLKNPAASTAGAPSTAAQIKAAEDAAHVVVKGLDSTIAATQAMIDYFAGLPAP 281
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
T + + + Y +ST + + + + ++
Sbjct: 282 VTIASTTTLMKQGQLEQYNEHLDSTIKNEVGTAEYNLQKMKDTNPDYRSAGIASLNLDDT 341
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+ +E ++ + I ++ + + +R+ D + MRD +++AD +
Sbjct: 342 KSAQEAITTLTKAIGSYSSVTASLAAGINRLGYSSDNLTNMRDGNMAAKDSIMNADAVAA 401
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLF 450
ST + ++ALS + LF
Sbjct: 402 STAQNTAMLLMNSGIKALSKNTQMGQMVAQLF 433
>gi|238920295|ref|YP_002933810.1| flagellin [Edwardsiella ictaluri 93-146]
gi|182342508|gb|ACB87393.1| flagellin 3 [Edwardsiella ictaluri]
gi|238869864|gb|ACR69575.1| flagellin [Edwardsiella ictaluri 93-146]
Length = 352
Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 3/152 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNILSLQAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANINGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ D + I+ SIQ EITQ ++
Sbjct: 64 ASRNANDGISLAQTTEGALNEVNDNLQNIRRLTVQAQNGSNSESDLQSIQDEITQRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
I+ + FNG L D + A
Sbjct: 124 NRISAQTDFNGVKVLSKDQTLTIQVGADDGQT 155
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/314 (11%), Positives = 78/314 (24%)
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ + +++ F + NG Q + + + + R ++
Sbjct: 39 NSAKDDAAGQAIANRFTANINGLTQASRNANDGISLAQTTEGALNEVNDNLQNIRRLTVQ 98
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ + D+ T + + + + DQ I
Sbjct: 99 AQNGSNSESDLQSIQDEITQRLDEINRISAQTDFNGVKVLSKDQTLTIQVGADDGQTIGI 158
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
S + + T
Sbjct: 159 NLRQIDAGKLGLSTFSVMTKGTRVGDAVAAGTMVPATVGGKMVAVKAPAAGTGGATTSLV 218
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
T + + +I A ++ ++ +D +
Sbjct: 219 SGTSKDGQAGYYIKTVDAKGAATYTEASIGADGTVKAGAAVTDLQTPLATLDKALSQVDD 278
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G++ +R + + R+ DAD A+E + +S Q QQ L+
Sbjct: 279 LRSGLGAVQNRFDSVISNLDSTVTNLSASRSRIQDADYATEVSDMSRAQILQQAGTAVLA 338
Query: 438 IVNNSTARILSLFR 451
N ST +LSL R
Sbjct: 339 KANQSTQNVLSLLR 352
>gi|251772400|gb|EES52967.1| flagellin domain protein [Leptospirillum ferrodiazotrophum]
Length = 275
Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 72/226 (31%), Gaps = 3/226 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N ++++A L + L +R+SSG RV+ AD+ A +SI+Q M + +
Sbjct: 4 LVINDNIASLNAQYNLNETQRALAKHINRLSSGYRVNSPADDPAGYSISQRMGGQVKSYA 63
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKS---IQSEITQLQSQ 118
A GSS + A + ++ ++ K + E L+S+
Sbjct: 64 AAIRNANDGSSLLQTANGALQTDNTIILKMRQLAIEAANSTYSPKDLKVLNQEYQHLKSE 123
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IAR + FNG L + S + + + +
Sbjct: 124 ITRIARVTDFNGMKLLDGSHQDFKFHVGIYTTFSDRLHVKMGKVDASALGIGGTDILNRN 183
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
+ ++ + + +T +
Sbjct: 184 DAKHSVDQLDKALDRINELQGNIGAIQDRMEWTIRNLNTATTNVQA 229
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 32/122 (26%)
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ + + V +D + G IG+I R
Sbjct: 153 YTTFSDRLHVKMGKVDASALGIGGTDILNRNDAKHSVDQLDKALDRINELQGNIGAIQDR 212
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + V+ + D D A E+ R + Q Q L+ N +
Sbjct: 213 MEWTIRNLNTATTNVQASRAGIRDVDFAGETARFTKRQILSQSGAAVLAQSNLIPQAAIK 272
Query: 449 LF 450
L
Sbjct: 273 LL 274
>gi|59712686|ref|YP_205462.1| flagellin [Vibrio fischeri ES114]
gi|197335032|ref|YP_002156878.1| flagellin [Vibrio fischeri MJ11]
gi|59480787|gb|AAW86574.1| flagellin FlaF [Vibrio fischeri ES114]
gi|197316522|gb|ACH65969.1| flagellin [Vibrio fischeri MJ11]
Length = 377
Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats.
Identities = 49/365 (13%), Positives = 107/365 (29%), Gaps = 3/365 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN SAM+A + + + +++SSG +++ AAD+A+ I+ M + + L+
Sbjct: 4 SVNTNISAMTAQRYMNNATAAQTDSMEKLSSGSKINSAADDASGLQISNRMTAQSRGLNV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M + +V+ +++ D ++Q E + L +L
Sbjct: 64 AVRNAHEGMSITQTAEGAMKETTNVLQRLRDLSLQSANGSNTDADRAAMQEEASSLTDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF G + + G+ + I + N
Sbjct: 124 NRIAETTSFAGTRLINGEFGTKSFQIGADSGEAVAVTLNSMRADEATMGGKSYFAEEGRD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + T + +
Sbjct: 184 INWKVGAENTQFNVSYNDKNGNAQEINITAKTGDDIEELATYINGQTNELSASVTEDGVL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
TI PL + + N S + T + I V + S
Sbjct: 244 QVFMSGETISSPLEFSGSLANELKMGGESDDTVASMDLTTVGGAQRSIDVIDAALEYVDS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + + + + K+ D L ++ + + +
Sbjct: 304 NRASLGAIQNRFDSAIKNLTNINENISDSNSQIKDTDFAKETTNLTKSQILSQSSSSILA 363
Query: 360 AMEEM 364
++
Sbjct: 364 QAKQA 368
Score = 79.8 bits (194), Expect = 9e-13, Method: Composition-based stats.
Identities = 36/362 (9%), Positives = 80/362 (22%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
N TA + S S+I + + ++ +
Sbjct: 15 QRYMNNATAAQTDSMEKLSSGSKINSAADDASGLQISNRMTAQSRGLNVAVRNAHEGMSI 74
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + ++ D
Sbjct: 75 TQTAEGAMKETTNVLQRLRDLSLQSANGSNTDADRAAMQEEASSLTDELNRIAETTSFAG 134
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + A + A N+ + +
Sbjct: 135 TRLINGEFGTKSFQIGADSGEAVAVTLNSMRADEATMGGKSYFAEEGRDINWKVGAENTQ 194
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ S + N + T G TN A V S S
Sbjct: 195 FNVSYNDKNGNAQEINITAKTGDDIEELATYINGQTNELSASVTEDGVLQVFMSGETISS 254
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ + + + + ID ++ + +G+I +R
Sbjct: 255 PLEFSGSLANELKMGGESDDTVASMDLTTVGGAQRSIDVIDAALEYVDSNRASLGAIQNR 314
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + ++ D D A E+T L+ Q Q + L+ + +S
Sbjct: 315 FDSAIKNLTNINENISDSNSQIKDTDFAKETTNLTKSQILSQSSSSILAQAKQAPNAAVS 374
Query: 449 LF 450
L
Sbjct: 375 LL 376
>gi|114054909|gb|ABI50054.1| FlaA [Clostridium botulinum]
Length = 263
Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 71/178 (39%), Gaps = 3/178 (1%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N +AM+A + + +++SSGLR++ A D+AA +I++ M+ L S
Sbjct: 1 NLNAMNAXRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQASRN 60
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIA 123
S + A+ +++ ++ ++ G D +I++EIT+L +++ I+
Sbjct: 61 SQDSISLIQTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEINRIS 120
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ + FN + L I + + T + + +
Sbjct: 121 QQTEFNTQKLLSGGFKDKNFQIGANKAQTIKLTIGDMSAKTLGVSGVSVSDASKATDS 178
Score = 83.3 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 41/111 (36%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 153 TIGDMSAKTLGVSGVSVSDASKATDSIATIDKALGTVSTERAKLGANQNRLEHTINNLNT 212
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
+ ++ R+ D DMA E S Q A L+ N + +L L
Sbjct: 213 SSENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQL 263
>gi|294636859|ref|ZP_06715191.1| flagellin [Edwardsiella tarda ATCC 23685]
gi|291089920|gb|EFE22481.1| flagellin [Edwardsiella tarda ATCC 23685]
Length = 376
Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 3/148 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L L +R+SSGLR++ A D+AA +I+ ++ L+
Sbjct: 29 VINTNSLSLMAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAISNRFTANINGLTQ 88
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ + + I+ S SIQ EITQ ++
Sbjct: 89 ASRNANDGISLAQTTEGALNEVNNNLQNIRRLSVQAQNGSNSSSDLQSIQDEITQRLGEI 148
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAK 147
I++ + FNG L D + A
Sbjct: 149 DRISQQTDFNGVKVLSKDQKLTIQVGAN 176
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 47/137 (34%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + + +I + ++ ++ +D +
Sbjct: 240 VVSGTDKDGKAGYYVKAVNDTTGEVTYNKASIADDGAVTTGAKVTDIKTPLATLDKALSQ 299
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G++ +R + + + + R+ DAD A+E + +S Q QQ
Sbjct: 300 VDQLRSGLGAVQNRFDSVINNLNSTVNNLSASRSRIQDADYATEVSNMSRAQILQQAGTS 359
Query: 435 ALSIVNNSTARILSLFR 451
L+ N ST +LSL R
Sbjct: 360 VLAQANQSTQNVLSLLR 376
>gi|153937953|ref|YP_001389605.1| flagellin protein [Clostridium botulinum F str. Langeland]
gi|152933849|gb|ABS39347.1| flagellin protein [Clostridium botulinum F str. Langeland]
gi|295317699|gb|ADF98076.1| flagellin protein [Clostridium botulinum F str. 230613]
Length = 283
Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 73/178 (41%), Gaps = 3/178 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM A + + +R++SG+R++ A+D+ A +I++ M++ L
Sbjct: 3 INHNMNAMIAYRNIMINGALAGKAMERLASGMRINRASDDPAGLAISEKMRAQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + G S + +A+ G+ + ++ ++ + K+IQ EI QL +
Sbjct: 63 SRNVQDGISMIQVAEGGVREIQSMLQRMRELAVQAANGTNSPEERKNIQDEIDQLTRGID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
DIA+G+ FN L + + + + + ++ T
Sbjct: 123 DIAKGTEFNTIKLLNANATDAGEIKLQIGANEGQFFGVKLQNMNSEALGINGNTNKYG 180
Score = 83.3 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 43/117 (36%)
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + +N + + + D I A++ +G+ S+ + + +
Sbjct: 163 QNMNSEALGINGNTNKYGVDVSTAEKASAAIKVFDDAINKASSFMSSLGASSNMLEHRIN 222
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+++ + + R+ +ADMA E + QQ+A S V + L +
Sbjct: 223 YLENTIGNLTEAESRIRNADMAKEMMNYTKYSVLQQVAQAIFSQVLKQQESTIQLLK 279
>gi|26991067|ref|NP_746492.1| flagellin FliC [Pseudomonas putida KT2440]
gi|24986101|gb|AAN69956.1|AE016634_5 flagellin FliC [Pseudomonas putida KT2440]
Length = 687
Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 72/205 (35%), Gaps = 3/205 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++MS + L + L R+SSGL+++ A D+AA I+ + + LS
Sbjct: 3 LTVNTNITSMSVQKNLNKSSDALGTTMGRLSSGLKINSAKDDAAGLQISNRLTTQIKGLS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S A+ M+ + ++M ++ D S+Q E T L +
Sbjct: 63 VAVKNANDGISIAQTAEGAMATSGNIMQRMRELALQSANGSNSDDDRASMQQEFTALSGE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA ++F G N L S+ + + S + Y +
Sbjct: 123 LTRIANTTTFGGRNLLDGTFSGSSFQVGANSNESISFGMKDVSATSMKGNYNEASVAGGV 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVL 203
++ +
Sbjct: 183 ATLQASVTGAAGKFGTNNAGSTSAS 207
Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 47/113 (41%)
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
+ + + + + ++ + +D ++ + ++G++ +R ++
Sbjct: 574 AGKTSAVEMESTVSNLNITDAQSAQQAIQVLDGAMQSLDSQRSQLGAVQNRFDSTVANLQ 633
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + R+ DAD A+E+ LS QT QQ + LS N + +L L
Sbjct: 634 SISENSTAARSRIQDADFAAETAELSKQQTLQQASTAILSQANQLPSSVLKLL 686
>gi|14278900|dbj|BAB58986.1| flagellin [Bacillus subtilis]
Length = 306
Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 71/185 (38%), Gaps = 3/185 (1%)
Query: 9 SAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
+A++ S++L + + +++SSGLR++ A D+AA +I++ M+S L S
Sbjct: 1 AALNTSRQLNAGSNSAAKNMEKLSSGLRINRAGDDAAGLAISEKMRSQIRGLDMASKNAQ 60
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARG 125
G S + ++ +++ ++ + T +D +Q E+ QL S++ I+
Sbjct: 61 DGISLIQTSEGALNETHSILQRMSELATQAANDTNTDSDRSELQKEMDQLSSEVTRISTD 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+ FN + L T I + + N + +
Sbjct: 121 TEFNTKKLLDGTAKDLTFQIGANEGQTMTLSINKMDSESLKVGTTYTAQADGTLKSGDGN 180
Query: 186 RYGLL 190
Sbjct: 181 STATW 185
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 30/70 (42%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ I T I ++ K+G++ +R+ + + + + R+ D DMASE +
Sbjct: 237 LTTIKTAIDTVSSERAKLGAVQNRLEHTINNLGTSSENLTSAESRIRDVDMASEMMEYTK 296
Query: 425 LQTQQQLAVQ 434
Q +
Sbjct: 297 NNILTQASQA 306
>gi|301645557|ref|ZP_07245488.1| bacterial flagellin [Escherichia coli MS 146-1]
gi|30059906|gb|AAP13325.1| FliC [Escherichia coli]
gi|301076183|gb|EFK90989.1| bacterial flagellin [Escherichia coli MS 146-1]
Length = 561
Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats.
Identities = 49/374 (13%), Positives = 106/374 (28%), Gaps = 11/374 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSQSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITI--------DLKKIDSSTLKLTGFNV 175
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + +T + +T
Sbjct: 176 NGKAAVDNAKATDANLTTAGFTQGVVDSNGNSTWTKSTTTNFDAATAVNVLAAVKDGSTI 235
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + +A ++T + + + A A G S
Sbjct: 236 NYTGTGNGLGIAATSAYTYHDSTKSYTFDSTGAAVAGAASSLQGTFGTDTNTAKITIDGS 295
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ K+ +T +T + K+ + L + +
Sbjct: 296 AQEVNIAKDGKITDTDGKALYIDSTGNLTKNGSDTLTQATLNDVLTGANSVDDTRIDFDS 355
Query: 360 AMEEMVSFIDTQIK 373
M + +++ +
Sbjct: 356 GMSVTLDKVNSTVD 369
Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/380 (12%), Positives = 106/380 (27%), Gaps = 5/380 (1%)
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+ ++ + + + + + + +A + N+ T
Sbjct: 182 DNAKATDANLTTAGFTQGVVDSNGNSTWTKSTTTNFDAATAVNVLAAVKDGSTINYTGTG 241
Query: 138 LGSSTASIAKSVI-----GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
G A+ + V T + ++
Sbjct: 242 NGLGIAATSAYTYHDSTKSYTFDSTGAAVAGAASSLQGTFGTDTNTAKITIDGSAQEVNI 301
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
K+ K + + + AT + A + + + + V L
Sbjct: 302 AKDGKITDTDGKALYIDSTGNLTKNGSDTLTQATLNDVLTGANSVDDTRIDFDSGMSVTL 361
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+ + T + + + + + + N T N++ + N V G
Sbjct: 362 DKVNSTVDITGASISAAAMTNELTGKAYTVVNGAESYAVATNNTVKTTADAKNVYVDASG 421
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
T D + V T+ ++ A ++ +D I
Sbjct: 422 KLTTDDKATVTETYHEFANGNIYDDKGAAVYAAADGSLTTETTSKSEATANPLAALDDAI 481
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+G+I +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 482 SQIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAG 541
Query: 433 VQALSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 542 NSVLAKANQVPQQVLSLLQG 561
>gi|302876239|ref|YP_003844872.1| flagellin domain-containing protein [Clostridium cellulovorans
743B]
gi|302579096|gb|ADL53108.1| flagellin domain protein [Clostridium cellulovorans 743B]
Length = 274
Score = 120 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + N N +++SSGLR++ A D+AA SI++ M++ L
Sbjct: 3 INHNMNAMNAQRNMGINNSNAAKSMEKLSSGLRINRAGDDAAGLSISEKMRAQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ G+++ ++ ++ G D +I++E+ L +++
Sbjct: 63 SRNAQDGISLIQTAEGGLNETQSILQRMRELAVQGANDTNANVDRAAIKAEMDTLTTEID 122
Query: 121 DIARGSSFNGENWLRTD 137
IA+ + FN + L
Sbjct: 123 RIAKTTEFNEKKLLNGS 139
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
A ++ I+ IK + +G+ +R+ + + ++ R+ D D
Sbjct: 178 VGTNSAAATAITKINDAIKAVSTQRSALGATQNRLEHTISNLNNASENLQAAESRIRDVD 237
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + QQ A LS N + +L L +
Sbjct: 238 MAKEMMHFTKNNVLQQAAQSMLSQANQAPQNVLQLLK 274
>gi|153840356|ref|ZP_01993023.1| polar flagellin E [Vibrio parahaemolyticus AQ3810]
gi|149745981|gb|EDM57111.1| polar flagellin E [Vibrio parahaemolyticus AQ3810]
Length = 374
Score = 120 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 69/194 (35%), Gaps = 3/194 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN +AM + L Q +SSG R++ A+D+AA I+ + +
Sbjct: 1 MVSLNTNVAAMMTQRHLSQAADQNVESQRNLSSGYRINSASDDAAGLQISNTLHVQTRGI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
S A+ + ++ D++ +++ D S+Q E+ LQ
Sbjct: 61 DVALRNAHDAYSVAQTAEGALHESSDILQRLRSLGLQAANGSHEQDDRTSLQQEVIALQD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L +A ++F +N GS + I + + N + I + L
Sbjct: 121 ELDRVAITTTFADKNLFNGSYGSQSFHIGANANSISLTLRNMRTHIPEMGGQHYLGDSLD 180
Query: 178 DSSTDGTERYGLLD 191
+
Sbjct: 181 KDWRVTRDNQQFAF 194
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/371 (10%), Positives = 87/371 (23%)
Query: 80 GMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
++ + M T ++ A + +++ S + S R
Sbjct: 3 SLNTNVAAMMTQRHLSQAADQNVESQRNLSSGYRINSASDDAAGLQISNTLHVQTRGIDV 62
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + + + S +
Sbjct: 63 ALRNAHDAYSVAQTAEGALHESSDILQRLRSLGLQAANGSHEQDDRTSLQQEVIALQDEL 122
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+V + + + + + L +
Sbjct: 123 DRVAITTTFADKNLFNGSYGSQSFHIGANANSISLTLRNMRTHIPEMGGQHYLGDSLDKD 182
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + + + + V + T + A V H
Sbjct: 183 WRVTRDNQQFAFEYRDNEGQAQSKALTLKVGDNLEEVATYINAQQSVVDASVTQDHQLQF 242
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
ST K + + + + + + +D IK +
Sbjct: 243 FTSTLNAPEGVTWKGNFADEMDIGSGELVTVDDLDMSTVGGAQLAIGVVDAAIKYVDSHR 302
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+IG +R+ D + + +V + GR+ D D A EST + Q Q L+
Sbjct: 303 SEIGGFQNRVSGTIDNLNTINRSVSESKGRIRDTDFARESTVMVRSQVLQDATTALLAQA 362
Query: 440 NNSTARILSLF 450
+ L L
Sbjct: 363 KQRPSSALGLL 373
>gi|196039142|ref|ZP_03106449.1| flagellin protein [Bacillus cereus NVH0597-99]
gi|196030287|gb|EDX68887.1| flagellin protein [Bacillus cereus NVH0597-99]
Length = 367
Score = 120 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++ + +R + DR+SSG R+++A+D+AA +IA M++ L+
Sbjct: 3 INTNINSLRTQEYMRQNQSKMSNSMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + M+ +++ +++ ++ ++Q E +LQ Q+
Sbjct: 63 ANNTQDGMSLIRTADSAMNSVSNILLRMRDIANQSANGTNTDSNKSALQKEFDELQKQIT 122
Query: 121 DIARGSSFNGENWLRTDL 138
IA + FN +N L+ D
Sbjct: 123 YIADNTQFNDKNLLKEDS 140
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/365 (9%), Positives = 96/365 (26%)
Query: 87 VMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
+ + I + T R SK S + + A + R S ++A
Sbjct: 3 INTNINSLRTQEYMRQNQSKMSNSMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVA 62
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + + + + + + + + +
Sbjct: 63 ANNTQDGMSLIRTADSAMNSVSNILLRMRDIANQSANGTNTDSNKSALQKEFDELQKQIT 122
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
++ + K +++ A L +
Sbjct: 123 YIADNTQFNDKNLLKEDSEVKIQTLDSSSSEQQIGINLKAVTLEKLGIDKISIGAAGAAG 182
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
G+ + + + N + +K++ + + + +
Sbjct: 183 GAAAAAKIEQKDIDAVNNGIGKLTKDSKDADITAIKEAFDKIKVGMDPAQVTAIDDALKA 242
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
++ + L EK E V ID + +G+
Sbjct: 243 FKEGSATDDIVTDIKDALKGATLPKATDAAEKDNALEAVKAIDKALTTVADNRATLGATL 302
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R+ + +K ++ ++ DADMA E + ++ + + + LS N + +
Sbjct: 303 NRLDFNVNNLKSQSASMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMV 362
Query: 447 LSLFR 451
L +
Sbjct: 363 SKLLQ 367
>gi|511892|gb|AAA68044.1| flagellar protein [Brachyspira hyodysenteriae]
Length = 290
Score = 120 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 77/205 (37%), Gaps = 3/205 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N SA++A + L+ +L+ +SSG+R++ A D+A+ ++++ M++ L
Sbjct: 2 VINNNISAINAQRTLKFRQVDLKKDSAMISSGMRINQAGDDASGLAVSEKMRTQIRGLRM 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
G S + + + + +++ I+ D +Q E++QL ++
Sbjct: 62 AERNTQDGISFIQTTEGYLEETTNILQRIRELAIQAANGIYTDEDRLYVQIEVSQLVDEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + FN N L ST + N + ++ + + L +
Sbjct: 122 DRVASQAQFNKLNMLTGRFARSTGENTPTASMWLHIGANMDERKRVYIGTMNSQALGLKN 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLK 204
+ + K +
Sbjct: 182 PVGPAVTATFISVSSPAKANSVIGM 206
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 19/162 (11%), Positives = 49/162 (30%)
Query: 290 RATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRH 349
+ N +T + + ++ + +
Sbjct: 129 QFNKLNMLTGRFARSTGENTPTASMWLHIGANMDERKRVYIGTMNSQALGLKNPVGPAVT 188
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
A + + ++ +D + +G+ +R+ + + + + ++ R
Sbjct: 189 ATFISVSSPAKANSVIGMVDEALLKVLKQRSDLGAYQNRLEMTAQGLMVGFENMQASESR 248
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D DMA S +L+ Q Q + L+ N L L +
Sbjct: 249 IRDTDMAEASVKLAKDQILNQANLSMLAQANQLPQGALRLLQ 290
>gi|42522024|ref|NP_967404.1| flagellin [Bdellovibrio bacteriovorus HD100]
gi|39574555|emb|CAE78397.1| flagellin [Bdellovibrio bacteriovorus HD100]
Length = 277
Score = 120 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 74/179 (41%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + L N N R++SG+R++ AAD+AA +I++ +K L
Sbjct: 5 IGTNVAALNAQKNLYMTNINANRSMARLASGMRINQAADDAAGLAISENLKGQIRGLRQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ G S V +A+ +++ +++ ++ T+ K + E QL+S+++
Sbjct: 65 NRNANDGISLVQVAEGSLNEVSNMLIRLRELGVQASSDTIGETERKFLDVEYQQLKSEIQ 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I + FNG L G + + R L + +
Sbjct: 125 RITESTVFNGYELLNGTGGMIDIQVGVNNDAFRDRISFNAGAANASIDALGLTAENVGT 183
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 38/97 (39%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
K + + + ID + A G++ +R+ + + + + + R+ D
Sbjct: 180 NVGTKESAQLSLGTIDQALTSVNAIRANFGALQNRLQSTSNNLLIADENLSAANSRIRDT 239
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D+A+E++ ++ Q V L N S L L
Sbjct: 240 DVAAETSEMTRNNILLQAGVSVLGQANQSQQLALKLL 276
>gi|169950589|gb|ACB05824.1| flagellin [Clostridium botulinum]
Length = 275
Score = 120 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 1 TIINHNLNAMNARRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLN 60
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQ 118
S S + A+ +++ ++ ++ D +++Q E+ +LQS+
Sbjct: 61 QASRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSE 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIA 146
+ IA + FN ++ + + ++
Sbjct: 121 INRIASQTQFNTKSLINGAVSEDAKAMT 148
Score = 86.3 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 49/133 (36%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D ++ T + + I + + N + + + ++ ID+ I +
Sbjct: 143 DAKAMTFQIGANSGQTIKLTIGSMDAKTLKVDNIKLDDTAANITKQIATIDSAINSVSKE 202
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 203 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 262
Query: 439 VNNSTARILSLFR 451
N + +L L R
Sbjct: 263 ANQAPQGVLQLLR 275
>gi|56383041|emb|CAE53942.1| flagellin [Escherichia coli]
Length = 349
Score = 120 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 3/180 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S A+ +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTAEGALSEINNNLQRIRELTVQASTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + A I + + +
Sbjct: 124 DRVSGQTQFNGVNVLSKNDLMKIQIGANDNETISIGLQQIDSTTLNLKGFTVSGMADFSA 183
Score = 96.3 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 47/137 (34%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ ST + +T A A + + +D I
Sbjct: 213 TDTASNSTKYAVVDSATGKYMKATVAITNTAAEVTVGPAEVAGAATADPLKALDAAIAKV 272
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 273 DKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 332
Query: 436 LSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 333 LAKANQVPQQVLSLLQG 349
>gi|109899393|ref|YP_662648.1| flagellin-like [Pseudoalteromonas atlantica T6c]
gi|109701674|gb|ABG41594.1| flagellin-like protein [Pseudoalteromonas atlantica T6c]
Length = 274
Score = 120 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN S+++A ++L + +L +R+SSG R++ AAD+AA I + + L
Sbjct: 5 VNTNVSSLNAQRQLFNSANSLNTSFERLSSGFRINRAADDAAGLQITDRLTTQVQGLDQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ S A+ + + + I+ D ++Q E++ L+S++
Sbjct: 65 ARNANDAISLTQTAEGALGEVTSSLQRIRQLAVQSQNGINSEADRVALQKEVSALKSEIT 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
I+ S F + L+ D + A
Sbjct: 125 RISTDSQFGTTDILKGDFSAKFLVGAN 151
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 37/100 (37%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I I +G++ +R + + + V R+
Sbjct: 174 DDVNVDTVEGASAALTAISEAISSVGGVRADLGALQNRFQSTIRNLSNISENVSGARSRI 233
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D D ASE+ L+ Q QQ ++ LS N LSL
Sbjct: 234 RDTDFASETAELTRNQIIQQASLTVLSQANQRPQSALSLL 273
>gi|169950596|gb|ACB05827.1| flagellin [Clostridium botulinum]
Length = 275
Score = 120 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAVNDTNVTVDRENLQKEVAELQSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA + FN ++ + + ++
Sbjct: 123 RIASQTQFNTKSLINGAVSEDAKAMT 148
Score = 86.7 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 49/133 (36%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D ++ T + + I + + N + + + ++ ID+ I +
Sbjct: 143 DAKAMTFQIGANSGQTIKLTIGSMDAKTLKVDNIKLDDTAANITKQIATIDSAINSVSKE 202
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 203 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 262
Query: 439 VNNSTARILSLFR 451
N + +L L R
Sbjct: 263 ANQAPQGVLQLLR 275
>gi|157161394|ref|YP_001458712.1| putative flagellin [Escherichia coli HS]
gi|157067074|gb|ABV06329.1| putative flagellin [Escherichia coli HS]
Length = 349
Score = 120 bits (299), Expect = 6e-25, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 3/180 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S A+ +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTAEGALSEINNNLQRIRELTVQASTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + A I + + +
Sbjct: 124 DRVSGQTQFNGVNVLSKNDSMKIQIGANDNQTISIGLQQIDSTTLNLKGFTVSGMADFSA 183
Score = 96.3 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 47/137 (34%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ ST + +T A A + + +D I
Sbjct: 213 TDTASNSTKYAVVDSATGKYMEATVAITGTAAAVTVGAAEVAGAATADPLKALDAAIAKV 272
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 273 DKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 332
Query: 436 LSIVNNSTARILSLFRG 452
LS N ++LSL +G
Sbjct: 333 LSKANQVPQQVLSLLQG 349
>gi|225181627|ref|ZP_03735068.1| flagellin domain protein [Dethiobacter alkaliphilus AHT 1]
gi|225167735|gb|EEG76545.1| flagellin domain protein [Dethiobacter alkaliphilus AHT 1]
Length = 276
Score = 120 bits (299), Expect = 6e-25, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 85/267 (31%), Gaps = 3/267 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N AM+ ++L N + +++SSG R++ A D+AA SI++ M+ L
Sbjct: 3 INNNIMAMNTHRQLSINNNSGANSMEKLSSGFRINRAGDDAAGLSISEKMRGQIRGLQQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ + +A ++ ++ D SI+ E+ +L+ +L
Sbjct: 63 SRNAQDGISMIQTAEGSLQEAHAILQRMRELSVQAANDTNVAADRTSIKDELDELKLELT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN EN L G++ + + V+ S
Sbjct: 123 RINNNTQFNTENVLDGTAGTAGKVNLLVGANKGEEMELDLTIKGIKLDDVISSLVVDVSD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+D + + L V K + +
Sbjct: 183 SDKAQDFVELVNTAITDVSAGRSKLGAWQNRLEHTIKNLDNAAENLQAAESRIRDVDMAK 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSG 267
+ + A+ A +
Sbjct: 243 EMMDFTKANILQQASTAMLAQANMAPQ 269
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 40/96 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ ++ V ++T I +A K+G+ +R+ + + ++ R+ D D
Sbjct: 180 VSDSDKAQDFVELVNTAITDVSAGRSKLGAWQNRLEHTIKNLDNAAENLQAAESRIRDVD 239
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA E + QQ + L+ N + +L L
Sbjct: 240 MAKEMMDFTKANILQQASTAMLAQANMAPQSVLQLL 275
>gi|40994711|emb|CAD60547.1| flagellin [Escherichia coli]
Length = 349
Score = 120 bits (299), Expect = 6e-25, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 3/180 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S A+ +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTAEGALSEINNNLQRIRELTVQASTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + A I + + +
Sbjct: 124 DRVSGQTQFNGVNVLSKNDSMKIQIGANDNQTISIGLQQIDSTTLNLKGFTVSGMADFSA 183
Score = 96.3 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 47/137 (34%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ ST + +T A A + + +D I
Sbjct: 213 TDTASNSTKYAVVDSATGKYMEATVAITGTAAAVTVGAAEVAGAATADPLKALDAAIAKV 272
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 273 DKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 332
Query: 436 LSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 333 LAKANQVPQQVLSLLQG 349
>gi|109899392|ref|YP_662647.1| flagellin-like [Pseudoalteromonas atlantica T6c]
gi|109701673|gb|ABG41593.1| flagellin-like protein [Pseudoalteromonas atlantica T6c]
Length = 276
Score = 120 bits (299), Expect = 6e-25, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 3/160 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN S+++A+++L N NL +R+SSG R++ A D+AA I+ + + L+
Sbjct: 5 VNTNVSSLNATRQLFTSNNNLNTAFERLSSGFRINSAKDDAAGLQISNRLTTQVLGLNMA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQSQLR 120
G S A+ + + + I+ D ++Q E+ L+ ++
Sbjct: 65 VRNANDGISLAQTAEGALGEVTTALQRIRVLAVQAQNGINASADRLALQKEVDALKFEMS 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
IA S F G N L S+ A +
Sbjct: 125 RIAATSQFGGVNILSGGFSSAFLVGANPGQTISVNISRAN 164
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 29/215 (13%), Positives = 54/215 (25%)
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
I + A A T+ + +V A + +
Sbjct: 62 NMAVRNANDGISLAQTAEGALGEVTTALQRIRVLAVQAQNGINASADRLALQKEVDALKF 121
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
S V + + S + +
Sbjct: 122 EMSRIAATSQFGGVNILSGGFSSAFLVGANPGQTISVNISRANGYGPEGLFEGEIISVAT 181
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ + + I A +G+I +R + + + V R+ D D A
Sbjct: 182 EAQASRAMVAVLEAISVIDAKRADLGAIQNRFQSTIRNLSNISENVSAARSRIRDTDFAV 241
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
E+ L+ Q QQ ++ L N L L +G
Sbjct: 242 ETAELTRWQIIQQASITVLGQANQRPQSALQLLQG 276
>gi|28897565|ref|NP_797170.1| flagellin [Vibrio parahaemolyticus RIMD 2210633]
gi|260364622|ref|ZP_05777224.1| polar flagellin E [Vibrio parahaemolyticus K5030]
gi|260878273|ref|ZP_05890628.1| polar flagellin E [Vibrio parahaemolyticus AN-5034]
gi|260898103|ref|ZP_05906599.1| polar flagellin E [Vibrio parahaemolyticus Peru-466]
gi|29840875|sp|Q9ZBA2|FLAE_VIBPA RecName: Full=Polar flagellin E
gi|28805777|dbj|BAC59054.1| polar flagellin FlaE [Vibrio parahaemolyticus RIMD 2210633]
gi|308086106|gb|EFO35801.1| polar flagellin E [Vibrio parahaemolyticus Peru-466]
gi|308090116|gb|EFO39811.1| polar flagellin E [Vibrio parahaemolyticus AN-5034]
gi|308115112|gb|EFO52652.1| polar flagellin E [Vibrio parahaemolyticus K5030]
Length = 374
Score = 120 bits (299), Expect = 6e-25, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 70/194 (36%), Gaps = 3/194 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN +AM + L Q +SSG R++ A+D+AA I+ + +
Sbjct: 1 MVSLNTNVAAMMTQRHLSQAADQNVESQRNLSSGYRINSASDDAAGLQISNTLHVQTRGI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
S A+ + ++ D++ +++ D KS+Q E+ LQ
Sbjct: 61 DVALRNAHDAYSVAQTAEGALHESSDILQRLRSLGLQAANGSHEQDDRKSLQQEVIALQD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L +A ++F +N GS + I + + N + I + L
Sbjct: 121 ELDRVAITTTFADKNLFNGSYGSQSFHIGANANSISLALRNMRTHIPEMGGQHYLGDSLD 180
Query: 178 DSSTDGTERYGLLD 191
+
Sbjct: 181 KDWRVTRDNQQFAF 194
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/371 (10%), Positives = 89/371 (23%)
Query: 80 GMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
++ + M T ++ A + +++ S + S R
Sbjct: 3 SLNTNVAAMMTQRHLSQAADQNVESQRNLSSGYRINSASDDAAGLQISNTLHVQTRGIDV 62
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + + + S + +
Sbjct: 63 ALRNAHDAYSVAQTAEGALHESSDILQRLRSLGLQAANGSHEQDDRKSLQQEVIALQDEL 122
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+V + + + + + A L +
Sbjct: 123 DRVAITTTFADKNLFNGSYGSQSFHIGANANSISLALRNMRTHIPEMGGQHYLGDSLDKD 182
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + + + + V + T + A V H
Sbjct: 183 WRVTRDNQQFAFEYQDNEGQAQSKVLTLKVGDNLEEVATYINAQQSVVDASVTQDHQLQF 242
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
ST K + + + + + + +D IK +
Sbjct: 243 FTSTLNAPEGITWKGNFADEMDIGSGELVTVDDLDMSTVGGAQLAIGVVDAAIKYVDSHR 302
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+IG +R+ D + + +V + GR+ D D A EST + Q Q L+
Sbjct: 303 SEIGGFQNRVSGTIDNLNTINRSVSESKGRIRDTDFARESTVMVRSQVLQDATTALLAQA 362
Query: 440 NNSTARILSLF 450
+ L L
Sbjct: 363 KQRPSSALGLL 373
>gi|295401176|ref|ZP_06811149.1| flagellin domain protein [Geobacillus thermoglucosidasius C56-YS93]
gi|294976769|gb|EFG52374.1| flagellin domain protein [Geobacillus thermoglucosidasius C56-YS93]
Length = 238
Score = 120 bits (299), Expect = 6e-25, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 70/194 (36%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++ ++L N +++SSG R++ A D+AA +I++ M+ L
Sbjct: 3 IQHNISALNTYRQLSFNNTQAAKNLEKLSSGYRINRAGDDAAGLAISEKMRGQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D K+IQ EI L S++
Sbjct: 63 SKNAQDGISLIQTAEGALNETHAILQRMRELAVQAANDTNVTADRKAIQDEINALVSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + L I + S L ++
Sbjct: 123 RIAANTEFNTQKLLDGTFSGKAFQIGANSGQSITLTIATMNATALGVNALKVTNAASANN 182
Query: 181 TDGTERYGLLDRNH 194
+ +
Sbjct: 183 AITKINNAIEKVST 196
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 25/62 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ I+ I+ + K+G++ +R+ + + + + R+ D D
Sbjct: 174 VTNAASANNAITKINNAIEKVSTERSKLGAVQNRLEHTINNLGATAENLTAAESRIRDVD 233
Query: 415 MA 416
A
Sbjct: 234 YA 235
>gi|189339466|gb|ABD33726.2| flagellin [Bacillus thuringiensis serovar ostriniae]
Length = 406
Score = 120 bits (299), Expect = 6e-25, Method: Composition-based stats.
Identities = 45/284 (15%), Positives = 94/284 (33%), Gaps = 3/284 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 36 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 95
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + ++ +++ +++ G + K++ E + L+ Q+
Sbjct: 96 ANNTQDGMSLIRTADSALNSVSNILLRMRDIANQSANGTNTGDNQKALDKEFSALKEQID 155
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L D S + + + N T
Sbjct: 156 YISKNTEFNDKKLLNGDNKSIAIQTLDNADTAKQININLADSSTKALNIDTLSIAGTTDK 215
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T L D + D+ + K T+ + +
Sbjct: 216 TITITAKDLTDNKTTLDALKTAKDDLAKLDDKSDQATIDKAVDAFKTAFNNVDKNLLSDK 275
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGN 284
+GI A + + + G
Sbjct: 276 AIEGITEKMTAFDGTHTAAAAIGAAYTEPTAADIKKSAPNASGA 319
Score = 95.6 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 46/134 (34%)
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
D + + + + + T D + ID ++ +
Sbjct: 273 SDKAIEGITEKMTAFDGTHTAAAAIGAAYTEPTAADIKKSAPNASGAIKSIDAALETIAS 332
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G+ +R+ + +K ++ ++ DADMA E + ++ + + + LS
Sbjct: 333 NRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGISMLS 392
Query: 438 IVNNSTARILSLFR 451
N + + L +
Sbjct: 393 QANQTPQMVSKLLQ 406
>gi|306814253|ref|ZP_07448419.1| flagellin [Escherichia coli NC101]
gi|305852412|gb|EFM52863.1| flagellin [Escherichia coli NC101]
Length = 548
Score = 120 bits (299), Expect = 6e-25, Method: Composition-based stats.
Identities = 51/387 (13%), Positives = 108/387 (27%), Gaps = 6/387 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D + + + D T + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMK-IQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGETA 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+T T + + AS A + A
Sbjct: 183 NTAATLKDMSGFTAAAAPGGTVGVTQYTDKSAVASSVDILNAVAGADGNKVTTSADVGFG 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + + +A + ++ + + + + +
Sbjct: 243 TPAAAVTYTYNKDTNSYSAASDDISSANLAAFLNPQAGDTTKATVTIGGKDQDVNIDKSG 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + + D++ L K + + T +
Sbjct: 303 NLTAADDGAVLYMDATGNLTKNNAGGDTQATLAKLATATGAKAATIQTDKGTFTSDGTAF 362
Query: 360 AMEEMVSFIDTQIKCA--TAAAGKIGS 384
M +T +G+
Sbjct: 363 DGASMSIDANTFANAVKNDTYTATVGA 389
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/315 (11%), Positives = 81/315 (25%)
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
S+ + + + + + +
Sbjct: 234 TTSADVGFGTPAAAVTYTYNKDTNSYSAASDDISSANLAAFLNPQAGDTTKATVTIGGKD 293
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ + K +++ D + T + A A +
Sbjct: 294 QDVNIDKSGNLTAADDGAVLYMDATGNLTKNNAGGDTQATLAKLATATGAKAATIQTDKG 353
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ S S+ A+ + N K + T
Sbjct: 354 TFTSDGTAFDGASMSIDANTFANAVKNDTYTATVGAKTYSVTTGSAAADTAYMSNGVLSD 413
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
E + +V TD ++ + + ++ +D I
Sbjct: 414 TPPTYYAQADGSITTTEDAAAGKLVYKGSDGKLTTDTTSKAESTSDPLAALDDAISQIDK 473
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G++ +R+ + + + R+ DAD A+E + +S Q QQ L+
Sbjct: 474 FRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLA 533
Query: 438 IVNNSTARILSLFRG 452
N ++LSL +G
Sbjct: 534 KANQVPQQVLSLLQG 548
>gi|205375054|ref|ZP_03227845.1| flagellin [Bacillus coahuilensis m4-4]
Length = 285
Score = 120 bits (299), Expect = 6e-25, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 82/219 (37%), Gaps = 4/219 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++L N +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTHRQLNGANDASANSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK----SIQSEITQLQSQL 119
S S + + +++ D++ ++ + GT+ +IQ EI +L +++
Sbjct: 63 SRNSQDAISLIQTGEGALNETHDILQRMRELVVQAGNTGTNETEDLQAIQDEIAELINEV 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I + FNG+ L S + ++ + ++ +
Sbjct: 123 DGIGDRTQFNGKTLLDGSWDGSAGDGSDDLVFQIGANKTQQLTLNLNSMKAADLGTTTTI 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
S + + ++ + + + +
Sbjct: 183 SAIDVTDFTTTSFDDQLAGIDEAINSVSAERSKMGAYQN 221
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 39/95 (41%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ ++ ++ ID I +A K+G+ +R+ + + + + R+ D DMA
Sbjct: 191 TTTSFDDQLAGIDEAINSVSAERSKMGAYQNRLDHTINNLGTSSENLTAAESRIRDVDMA 250
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + Q + L+ N + +L L R
Sbjct: 251 KEMMNQTKESILAQASQAMLAKANQAPQGVLQLLR 285
>gi|254973900|ref|ZP_05270372.1| flagellin subunit [Clostridium difficile QCD-66c26]
gi|255091285|ref|ZP_05320763.1| flagellin subunit [Clostridium difficile CIP 107932]
gi|255312944|ref|ZP_05354527.1| flagellin subunit [Clostridium difficile QCD-76w55]
gi|255515703|ref|ZP_05383379.1| flagellin subunit [Clostridium difficile QCD-97b34]
gi|255648797|ref|ZP_05395699.1| flagellin subunit [Clostridium difficile QCD-37x79]
gi|306518914|ref|ZP_07405261.1| flagellin subunit [Clostridium difficile QCD-32g58]
gi|261863729|gb|ACY01338.1| flagellin [Clostridium difficile]
gi|261863731|gb|ACY01339.1| flagellin [Clostridium difficile]
Length = 290
Score = 120 bits (299), Expect = 6e-25, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 74/203 (36%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN SA+ A+ ++ +++SSG+R+ AAD+AA +I++ M++ L
Sbjct: 3 VNTNVSALIANNQMGRNVNAQSKSMEKLSSGVRIKRAADDAAGLAISEKMRAQIKGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ G S V A+ + + +++ ++ + + I E+ QL+ ++
Sbjct: 63 GRNVQDGISVVQTAEGALEETGNILQRMRTLSVQSSNETNTAEERQKIADELLQLKDEVE 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ FNG+ L + + + N +I +
Sbjct: 123 RISSSIEFNGKKLLDGSSTEIRLQVGANFGTNVAGTTNNNNEIKVALVNTSSIMSKAGIT 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
+ + + V
Sbjct: 183 SSTIASLNADGTSGTDAAKQMVS 205
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 54/137 (39%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T+ T + + + +T + N D + A ++MVS +D +K
Sbjct: 153 TNVAGTTNNNNEIKVALVNTSSIMSKAGITSSTIASLNADGTSGTDAAKQMVSSLDVALK 212
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ K+G+ +R+ ++ + + V R+ D D+ASE LS + Q +
Sbjct: 213 ELNTSRAKLGAQQNRLESTQNNLNNTIENVTAAESRIRDTDVASEMVNLSKMNILVQASQ 272
Query: 434 QALSIVNNSTARILSLF 450
L+ N +L L
Sbjct: 273 SMLAQANQQPQGVLQLL 289
>gi|48927385|emb|CAG38109.1| flagellin [Bdellovibrio bacteriovorus]
Length = 277
Score = 120 bits (299), Expect = 6e-25, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 74/179 (41%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + L N N R++SG+R++ AAD+AA +I++ +K L
Sbjct: 5 IGTNVAALNAQKNLYMTNINANRSMARLASGMRINQAADDAAGLAISENLKGQIRGLRQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ G S V +A+ +++ +++ ++ T+ K + E QL+S+++
Sbjct: 65 NRNANDGISLVQVAEGSLNEVSNMLIRLRELGVQASSDTIGETERKFLDVEYQQLKSEIQ 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I + FNG L G + + R L + +
Sbjct: 125 RITESTVFNGYELLNGTGGMIDIQVGVNNDAFRDRISFNAGAANASIDALGLTAENVGT 183
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 38/96 (39%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
K + + + ID + A G++ +R+ + + + + + R+ D
Sbjct: 180 NVGTKESAQLSLGTIDQALTSVNAIRANFGALQNRLQSTSNNLLIADENLSAANSRIRDT 239
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
D+A+E++ ++ Q V L N S L L
Sbjct: 240 DVAAETSEMTRNNILLQAGVSVLGQANQSQQLALKL 275
>gi|307701601|ref|ZP_07638618.1| bacterial flagellin N-terminal domain protein [Mobiluncus mulieris
FB024-16]
gi|307613280|gb|EFN92532.1| bacterial flagellin N-terminal domain protein [Mobiluncus mulieris
FB024-16]
Length = 508
Score = 120 bits (299), Expect = 6e-25, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+S+ TN A+ A + + + + L +++SG R+++ D+AA ++A+ M+S
Sbjct: 230 SSLNTNVMALQAYRNMANAHKILNDSLLKLTSGERINNPGDDAAGLALAENMRSQLLGSK 289
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT--DSKSIQSEITQLQSQL 119
G S V A+ + +++ ++ G +I +E+ ++ ++
Sbjct: 290 QAVRNAQDGISLVQTAEGVLGTVHNMLQRMRVLAVQGASDSNQDQRGNIVTEMDSIRVEI 349
Query: 120 RDIARGSSFNGENW 133
I + G
Sbjct: 350 GRIGEATEVLGRKI 363
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 40/105 (38%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ A + + ID QI+ + A +G++ SR + + + + +
Sbjct: 401 HAQLGEIPQDASHEAFQGAIVNIDGQIEVISTARATLGAVMSRFENTINTLNVTVENLAA 460
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
GR+ D D +ES + Q + +S + +LSL
Sbjct: 461 ARGRIQDTDFTTESAEYMRGRILTQSSHAVMSQALLAPRGVLSLL 505
>gi|47565426|ref|ZP_00236467.1| flagellin [Bacillus cereus G9241]
gi|47557416|gb|EAL15743.1| flagellin [Bacillus cereus G9241]
Length = 307
Score = 120 bits (299), Expect = 6e-25, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 77/224 (34%), Gaps = 3/224 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG R+++AAD+AA +IA M+S L
Sbjct: 3 INTNINSMRTQEYMRQNQEKMNTSMNRLSSGKRINNAADDAAGLAIATRMRSQENGLGVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S G S + A + ++ +++ +++ GTD +++ E QL Q+
Sbjct: 63 SRNTQDGISLIRTADSALNSVSNILLRMRDLAVQSANGTNSGTDREALDKEFGQLVQQID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L + I S + + ++ ++
Sbjct: 123 YISTNTKFNDISVLSGATKNGAPEIDNSTKKTKDLTVSIVTDSNGGKMDVNLASIKTTDL 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
D + +
Sbjct: 183 GLSKSTTTTTTDPGSGDDVTSTTVAPISISADTTAKAAITAIDN 226
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 34/300 (11%), Positives = 84/300 (28%)
Query: 152 SFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ +R Q + + L +++ + L +
Sbjct: 8 NSMRTQEYMRQNQEKMNTSMNRLSSGKRINNAADDAAGLAIATRMRSQENGLGVASRNTQ 67
Query: 212 DASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
D I T L + S L+ + A G + +
Sbjct: 68 DGISLIRTADSALNSVSNILLRMRDLAVQSANGTNSGTDREALDKEFGQLVQQIDYISTN 127
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
+ + + + T D + T + G + + TT
Sbjct: 128 TKFNDISVLSGATKNGAPEIDNSTKKTKDLTVSIVTDSNGGKMDVNLASIKTTDLGLSKS 187
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ + + + + ++ ID +K T++ +G++ +R
Sbjct: 188 TTTTTTDPGSGDDVTSTTVAPISISADTTAKAAITAIDNAMKSLTSSRADLGAMLNRFDF 247
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ ++ DADMA E + ++ + + + LS N + + L +
Sbjct: 248 NVGNLNSQASSMASSASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 307
>gi|148380689|ref|YP_001255230.1| flagellin [Clostridium botulinum A str. ATCC 3502]
gi|153930899|ref|YP_001384973.1| flagellin [Clostridium botulinum A str. ATCC 19397]
gi|153936556|ref|YP_001388443.1| flagellin [Clostridium botulinum A str. Hall]
gi|226950143|ref|YP_002805234.1| flagellin [Clostridium botulinum A2 str. Kyoto]
gi|114054846|gb|ABI50023.1| FlaA [Clostridium botulinum]
gi|114054850|gb|ABI50025.1| FlaA [Clostridium botulinum]
gi|148290173|emb|CAL84292.1| flagellin [Clostridium botulinum A str. ATCC 3502]
gi|152926943|gb|ABS32443.1| flagellin [Clostridium botulinum A str. ATCC 19397]
gi|152932470|gb|ABS37969.1| flagellin [Clostridium botulinum A str. Hall]
gi|226842017|gb|ACO84683.1| flagellin [Clostridium botulinum A2 str. Kyoto]
Length = 275
Score = 120 bits (299), Expect = 6e-25, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I+ + FN ++ + + ++
Sbjct: 123 RISSQTQFNTKSLINGAVSEDAKAMT 148
Score = 86.7 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 47/133 (35%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D ++ T + + I + + + + + ++ ID I +
Sbjct: 143 DAKAMTFQIGANSGQTIKLTIGSMDAKTLKVDKIKLDDTAANVTKQIATIDNAINSVSKE 202
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 203 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 262
Query: 439 VNNSTARILSLFR 451
N + +L L R
Sbjct: 263 ANQAPQGVLQLLR 275
>gi|6606502|gb|AAF19180.1|AF198617_4 FlaB [Aeromonas caviae]
Length = 305
Score = 120 bits (299), Expect = 6e-25, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 71/177 (40%), Gaps = 3/177 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + + +++ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNTSSLNAQRNLMNTSKSMDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E+ QL +++
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSDKDRAALQKEVNQLGAEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
I++ ++F G L + A + + T+ +
Sbjct: 125 RISKDTTFAGTKLLDGNYSGKFQVGADANQTIGFSLSQAGGFSISGIAKAAGTTIDI 181
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 51/136 (37%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
TT+D + + + + ++ A + + + + +++ D ++
Sbjct: 169 SGIAKAAGTTIDIVSGPAGSVTTATGISLIFVSGSAGGISISTQSKAQAVLAAADAMLEV 228
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
++G++ +R+ + + V R+ DA+ A+E+ ++ QQ A
Sbjct: 229 VDGKRAELGAVQNRLDSTIRNQANISENVSAARSRIRDANFATETANMTKHNILQQAASS 288
Query: 435 ALSIVNNSTARILSLF 450
L+ N L L
Sbjct: 289 ILAQANQRPQSALQLL 304
>gi|296330256|ref|ZP_06872737.1| flagellin [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305676139|ref|YP_003867811.1| flagellin [Bacillus subtilis subsp. spizizenii str. W23]
gi|296152524|gb|EFG93392.1| flagellin [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305414383|gb|ADM39502.1| flagellin [Bacillus subtilis subsp. spizizenii str. W23]
Length = 275
Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats.
Identities = 40/254 (15%), Positives = 84/254 (33%), Gaps = 6/254 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ +L N + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTLNRLGSNNGAAQKNMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK----SIQSEITQLQSQL 119
S G S + A+ +++ ++ ++ GT +I+ E+ L ++
Sbjct: 63 SKNSQDGISLIQTAEGALTETHAILQRMRELTVQAGNTGTQQAEDLGAIKDEMDALIEEI 122
Query: 120 RDIARGSSFNGENWLRTDLGS--STASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
I+ + FNG+ L + T I + + LD
Sbjct: 123 DGISNRTEFNGKKLLDGTNSTDGFTFQIGANAGQQLNVKIDSMSSTALGVNALDVTDFAA 182
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ D + + + + S + A + + A
Sbjct: 183 TAFDDQLKSIDTAINTVSTQRAKLGAVQNRLEHTINNLGASGENLTAAESRIRDVDMAKE 242
Query: 238 TFDQAKGIATIPVP 251
+ K
Sbjct: 243 MSEFTKNNILSQAS 256
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 39/95 (41%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
A ++ + IDT I + K+G++ +R+ + + + + R+ D DMA
Sbjct: 181 AATAFDDQLKSIDTAINTVSTQRAKLGAVQNRLEHTINNLGASGENLTAAESRIRDVDMA 240
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + + Q + L+ N +L L R
Sbjct: 241 KEMSEFTKNNILSQASQAMLAQANQQPQNVLQLLR 275
>gi|312135418|ref|YP_004002756.1| flagellin domain-containing protein [Caldicellulosiruptor
owensensis OL]
gi|311775469|gb|ADQ04956.1| flagellin domain protein [Caldicellulosiruptor owensensis OL]
Length = 272
Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++ +L N L +++SSG+R++ A D+AA +I++ M+ L+
Sbjct: 3 INNNVQALNTYNRLTINNDALAKSLEKLSSGMRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ D +++QSE+ QL ++
Sbjct: 63 IRNAQDGISLIQTAEGALNETHSILQRMRELAVQAANDTNTDADRQALQSEVDQLVREID 122
Query: 121 DIARGSSFNGENWLRTD 137
IA + FN + L
Sbjct: 123 RIATTTQFNTKTLLDGT 139
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 28/239 (11%), Positives = 63/239 (26%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ S + + A A N T
Sbjct: 34 MRINRAGDDAAGLAISEKMRGQIRGLNQAIRNAQDGISLIQTAEGALNETHSILQRMREL 93
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+A +++ + +T + +
Sbjct: 94 AVQAANDTNTDADRQALQSEVDQLVREIDRIATTTQFNTKTLLDGTVASTGLVFHIGANI 153
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + T + + + + + +S ID+ I+ + K+G+ +R+
Sbjct: 154 DQNITLTISDTQASALGLSGISISTQASANAAISTIDSAIQYISGVRAKLGAYQNRLEHT 213
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + + + R+ D DMA E + Q A L+ N +L L R
Sbjct: 214 INNLGVSSENLTAAESRIRDVDMAKEMMAFTKNNILMQAATAMLAQANQLPQAVLQLLR 272
>gi|149928173|ref|ZP_01916419.1| flagellin-like protein [Limnobacter sp. MED105]
gi|149823158|gb|EDM82396.1| flagellin-like protein [Limnobacter sp. MED105]
Length = 297
Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 75/206 (36%), Gaps = 3/206 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++++A + L L R+SSGLRV+ A D+AA +IA+ M++
Sbjct: 11 MLGINTNVASLTAQKNLSGSGMGLNNSIARLSSGLRVNSAKDDAAGLAIAERMQAQIRGF 70
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQS 117
G S + +A M K D + ++ TD ++ E T+L +
Sbjct: 71 DVAGRNANDGISLLQVADGAMGKISDNLQRMRELAVQAKNGTLNPTDRVNLNREYTELAN 130
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ I GS+FNG N + + + S + N + L
Sbjct: 131 EVDRIVTGSTFNGNNLFDAANQTLSFQVGTGNAVSDTLELNLTDDGLSTGNDLTTIMTNG 190
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVL 203
+ N ++
Sbjct: 191 AADIQTNLGAITDVANATTAIDTLDA 216
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 47/138 (34%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T V + L D M N A + + +D I
Sbjct: 160 TGNAVSDTLELNLTDDGLSTGNDLTTIMTNGAADIQTNLGAITDVANATTAIDTLDASID 219
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
T +G+ SR+ F + ++ GR++DAD A E+ L+ Q QQ
Sbjct: 220 AITGIRAVVGAGQSRLEQVAAFADVSSTNLQAARGRIMDADFAKETANLTRSQILQQAGT 279
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL +
Sbjct: 280 AMLAQANQLPNNVLSLLQ 297
>gi|30059854|gb|AAP13299.1| FliC [Escherichia coli]
Length = 548
Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 3/154 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
++ + FNG N L D A
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTIT 157
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/315 (11%), Positives = 80/315 (25%)
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
S+ + + + + + +
Sbjct: 234 TTSADVGFGTPAAAVTYTYNKDTNSYSAASDDISSANLAAFLNPQAGDTTKATVTIGGKD 293
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ + K +++ D + T + A A +
Sbjct: 294 QDVNIDKSGNLTAADDGAVLYMDATGNLTKNNAGGDTQATLAKLATATGAKAATIQTDKG 353
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ S S+ + + N K + T
Sbjct: 354 TFTSDGTAFDGASMSIDTNTFANAVKNDTYTATVGAKTYSVTTGSAAADTAYMSNGVLSD 413
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
E + +V TD ++ + + ++ +D I
Sbjct: 414 TPPTYYAQADGSITTTEDAAAGKLVYKGSDGKLTTDTTSKAESTSDPLAALDDAISQIDK 473
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G++ +R+ + + + R+ DAD A+E + +S Q QQ L+
Sbjct: 474 FRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLA 533
Query: 438 IVNNSTARILSLFRG 452
N ++LSL +G
Sbjct: 534 KANQVPQQVLSLLQG 548
>gi|148266105|ref|YP_001232811.1| flagellin domain-containing protein [Geobacter uraniireducens Rf4]
gi|146399605|gb|ABQ28238.1| flagellin domain protein [Geobacter uraniireducens Rf4]
Length = 276
Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 3/149 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++A + L +L R+SSGLR++ AAD+AA +I++ MK+ +++
Sbjct: 3 LTVNTNIASLNAQRNLSITQVSLNKSLQRLSSGLRINSAADDAAGLAISEGMKAQIRSMN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S V +A+ +++ +V+ ++ T T + E QL+S+
Sbjct: 63 QAVRNANDGVSLVQVAEGALNEVSNVLGRMRELTTQAATNTLTATQRSYVNGEYLQLKSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAK 147
+ IA + FNG L++ +
Sbjct: 123 ITRIANATDFNGTKLLQSAKSVAIQVGTG 151
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 39/87 (44%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ ID I + +G+I +R+ + +++ + R+ DAD+A+E+ ++
Sbjct: 190 LAVIDKAINSVSKQRASLGAIQNRLQSTINNLQVASENTSAAQSRIADADVAAETANMTR 249
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q L+ N + LSL R
Sbjct: 250 ANILVQAGTAILAQANQAPQAALSLLR 276
>gi|307718465|ref|YP_003873997.1| flagellar filament 41 kDa core protein [Spirochaeta thermophila DSM
6192]
gi|306532190|gb|ADN01724.1| flagellar filament 41 kDa core protein [Spirochaeta thermophila DSM
6192]
Length = 282
Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ A++ L + + + +++SSGLR++ AAD+AA +I++ M+S L+
Sbjct: 3 INHNMSALYANRTLAERDTAITKNIEKLSSGLRITRAADDAAGLAISEKMRSQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ I S + + + + D++ ++ D IQ E++QL ++
Sbjct: 63 ARNIQDAVSFIQTTEGYLQETQDILHRLRELSVQAANGIYSDEDRLQIQVEVSQLVDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FNG N L + +G+ + T L
Sbjct: 123 RIASHAQFNGMNLLTGGFAPNGPRSLTIQVGANMDQQERIYIGTMTAEALLGGQNAGAG 181
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 46/133 (34%)
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
+D ++ + + +++ + + + +DT ++ +
Sbjct: 149 TIQVGANMDQQERIYIGTMTAEALLGGQNAGAGALVSISTPEDANRTIGQVDTALRIVSK 208
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G+ +R + + + + ++ R+ D DMASE Q Q L+
Sbjct: 209 QRADLGAYQNRFEMAWKGVSVAAENIQAAESRIRDVDMASEMVEYVKNQILTQANTAMLA 268
Query: 438 IVNNSTARILSLF 450
N T +L L
Sbjct: 269 QANMKTQSVLQLL 281
>gi|332305624|ref|YP_004433475.1| flagellin domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332172953|gb|AEE22207.1| flagellin domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 274
Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN S+++A ++L + +L +R+SSG R++ AAD+AA I + + L
Sbjct: 5 VNTNVSSLNAQRQLFNSASSLNTSFERLSSGFRINRAADDAAGLQITDRLTTQIQGLDQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ S A+ + + + I+ D ++Q E++ L+S++
Sbjct: 65 ARNANDAISLTQTAEGALGEVTSSLQRIRQLAVQSQNGINSSADRVALQKEVSALKSEIT 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
I+ S F + L + A
Sbjct: 125 RISTDSQFGTTDILDGTFSAKFLVGAN 151
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 38/102 (37%)
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
+ + + ++ I I +G++ +R + + + V
Sbjct: 172 NIDDLNIDTVEGASAALTAISEAISSVGGVRADLGALQNRFQSTIRNLSNISENVSGARS 231
Query: 409 RLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R+ D D ASE+ L+ Q QQ ++ LS N LSL
Sbjct: 232 RIRDTDFASETAELTRNQIIQQASLTVLSQANQRPQSALSLL 273
>gi|189339440|gb|ABD33708.2| flagellin [Bacillus thuringiensis serovar monterrey]
Length = 394
Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 87/273 (31%), Gaps = 3/273 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 36 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 95
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + M+ +++ +++ + ++ E L+ Q+
Sbjct: 96 ANNTQDGMSLIRTADSAMNSVSNILLRMRDLANQSANGTNTNENQAALNKEFDALKEQIN 155
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L + + S D T + +
Sbjct: 156 YISTNTEFNDKKLLDGSNKTIAIQTLDNADTSKKIDIKLADVSTESLKIDKLKIGGVSKE 215
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + + LK + + + T
Sbjct: 216 TTDAVSETFTKLSTTKTTDKDALKAEVEAAMKEFDKVKGAMSTEDAKAVTDKLGLFNTAA 275
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
I AA + T + SV
Sbjct: 276 AGTDDTAIATAAKNLGAAFDKTKVNMADPNASV 308
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 20/149 (13%), Positives = 47/149 (31%)
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
K + + L D A
Sbjct: 246 MKEFDKVKGAMSTEDAKAVTDKLGLFNTAAAGTDDTAIATAAKNLGAAFDKTKVNMADPN 305
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
V+ ID+ ++ + +G+ +R+ + +K + ++ ++ DADMA E + +
Sbjct: 306 ASVAAIDSALENIASNRATLGATLNRLDFNVNNLKSQQSSMASAASQIEDADMAKEMSEM 365
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + + LS N + + L +
Sbjct: 366 TKFKILNEAGISMLSQANQTPQMVSKLLQ 394
>gi|114054828|gb|ABI50014.1| FlaA [Clostridium botulinum]
Length = 272
Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 1 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 61 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I+ + FN ++ + + ++
Sbjct: 121 RISSQTQFNTKSLINGAVSEDAKAMT 146
Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 46/132 (34%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D ++ T + + I + + + + + ++ ID I +
Sbjct: 141 DAKAMTFQIGANSGQTIKLTIGSMDAKTLKVDKIKLDDTAANVTKQIATIDNAINSVSKE 200
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 201 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 260
Query: 439 VNNSTARILSLF 450
N + +L L
Sbjct: 261 ANQAPQGVLQLL 272
>gi|332994155|gb|AEF04210.1| flagellar hook-associated protein FlgL [Alteromonas sp. SN2]
Length = 407
Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats.
Identities = 52/450 (11%), Positives = 123/450 (27%), Gaps = 51/450 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ + + + + L Q+++++G R+ AD+ + + + L+
Sbjct: 3 ISTSQVYDQSIRSIMENQEGLVKTQEQLATGKRIITPADDPVGAAKVLRLTEELDGLTQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
L + ++ +A ++ + ++ + + D ++I +E+ Q++ ++
Sbjct: 63 QRNNDLVTGSLEQQEAVLTNITNSINRARTLVVQAGSGILDDPDKRAIGAELEQIKLEIF 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
D+ +G ++ A +G ++ I + +
Sbjct: 123 DLMNTQDADGNYMYAGYQSANQAFTYNPASSGNAITFSGDAGVSFIQLSSSSKIQSTSNG 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ E L++
Sbjct: 183 YEVFENVLSRFDFSVTGSTVADLQN----------------------------------- 207
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
V S + ++ G + + T T
Sbjct: 208 --------TVVKEQGTFDTFFNKNYDPVTSANNDYQVEFLASGEAQLTNTGTGAVVGTVG 259
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ K T S K+ + I + D + A
Sbjct: 260 YTSGSPFTIKGMQFEASAAVGDTINFSLDAPEKKSMAQSLHEIQTILMDSTIDDSALQEA 319
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + + +D ++ + IGS + + M A + + D D A ST
Sbjct: 320 IADSLVGLDNGLEKISLERASIGSRLNIAESTYESNLDMEIAAKASRSSIQDVDYAEAST 379
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ +T A+ V LSLF
Sbjct: 380 EFAKQETALNAALATFPQV-----SNLSLF 404
>gi|215487128|ref|YP_002329559.1| flagellin [Escherichia coli O127:H6 str. E2348/69]
gi|312967124|ref|ZP_07781342.1| flagellin [Escherichia coli 2362-75]
gi|215265200|emb|CAS09589.1| flagellar filament structural protein (flagellin) [Escherichia coli
O127:H6 str. E2348/69]
gi|312288588|gb|EFR16490.1| flagellin [Escherichia coli 2362-75]
Length = 548
Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 3/154 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
++ + FNG N L D A
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTIT 157
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/315 (11%), Positives = 81/315 (25%)
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
S+ + + + + + +
Sbjct: 234 TTSADVGFGTPAAAVTYTYNKDTNSYSAASDDISSANLAAFLNPQARDTTKATVTIGGKD 293
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ + K +++ D + T + A A +
Sbjct: 294 QDVNIDKSGNLTAADDGAVLYMDATGNLTKNNAGGDTQATLAKVATATGAKAATIQTDKG 353
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ S S+ A+ + N K + T
Sbjct: 354 TFTSDGTAFDGASMSIDANTFANAVKNDTYTATVGAKTYSVTTGSAAADTAYMSNGVLSD 413
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
E + +V TD ++ + + ++ +D I
Sbjct: 414 TPPTYYAQADGSITTTEDAAAGKLVYKGSDGKLTTDTTSKAESTSDPLAALDDAISQIDK 473
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G++ +R+ + + + R+ DAD A+E + +S Q QQ L+
Sbjct: 474 FRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLA 533
Query: 438 IVNNSTARILSLFRG 452
N ++LSL +G
Sbjct: 534 KANQVPQQVLSLLQG 548
>gi|167628876|ref|YP_001679375.1| flagellin protein flic [Heliobacterium modesticaldum Ice1]
gi|167591616|gb|ABZ83364.1| flagellin protein flic [Heliobacterium modesticaldum Ice1]
Length = 319
Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats.
Identities = 37/364 (10%), Positives = 90/364 (24%), Gaps = 48/364 (13%)
Query: 91 IKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
++ D + +Q+E+ QL+ ++ I + FN + L +
Sbjct: 1 MRELAVQATNDTNTDSDRRELQNEVKQLKLEIDRIGNTTEFNTKKLLEGSAAGPREKVDG 60
Query: 148 SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
+I +
Sbjct: 61 V---------------------------------------------VQINNNSSLKLSGL 75
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
++ D I + + D + + + +
Sbjct: 76 KALQDMFKNIGEGQAAASGVKINGAVILVREKDTSGASMSTGDFAIYTNSGGRLAGSDTT 135
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
+ S + ++ + +++ T N + +
Sbjct: 136 FLNISASGIRLGSQITANSAAQALQISAALSGMKVGETITFVFGKNEDAKNVLSGSMMFQ 195
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+ + + K + I I+ +A +G++ +
Sbjct: 196 IGANAGQTTFAAINDMRVKALDLSGVDISSKWGAAVAIERIQQAIEKVSAQRSLLGALQN 255
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
R+ + + ++ R+ D DMA E + L QQ + L+ N + +L
Sbjct: 256 RLEYTIRNVDTAAENIQASESRIRDVDMAKEMMNFTRLNILQQASNSMLAQANQAPQNVL 315
Query: 448 SLFR 451
SL R
Sbjct: 316 SLLR 319
>gi|4204100|gb|AAD10273.1| polar flagellin [Vibrio parahaemolyticus]
Length = 374
Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 72/205 (35%), Gaps = 3/205 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN +AM + L Q +SSG R++ A+D+AA I+ + +
Sbjct: 1 MVSLNTNVAAMMTQRHLSQAADQNVESQRNLSSGYRINSASDDAAGLQISNTLHVQTRGI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
S A+ + ++ D++ +++ D S+Q E+ LQ
Sbjct: 61 DVALRNAHDAYSVAQTAEGALHESSDILQRLRSLGLQAANGSHEQDDRTSLQQEVIALQD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L +A ++F +N GS + I + + N + I + L
Sbjct: 121 ELDRVAITTTFADKNLFNGSYGSQSFHIGANANSISLTLRNMRTHIPEMGGQHYLGDSLD 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQV 202
+ + + Q
Sbjct: 181 KDWRVTRDNQQFAFEYQDNEGQTQS 205
Score = 89.8 bits (220), Expect = 9e-16, Method: Composition-based stats.
Identities = 39/371 (10%), Positives = 89/371 (23%)
Query: 80 GMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
++ + M T ++ A + +++ S + S R
Sbjct: 3 SLNTNVAAMMTQRHLSQAADQNVESQRNLSSGYRINSASDDAAGLQISNTLHVQTRGIDV 62
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + + + S +
Sbjct: 63 ALRNAHDAYSVAQTAEGALHESSDILQRLRSLGLQAANGSHEQDDRTSLQQEVIALQDEL 122
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+V + + + + + L +
Sbjct: 123 DRVAITTTFADKNLFNGSYGSQSFHIGANANSISLTLRNMRTHIPEMGGQHYLGDSLDKD 182
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + + + + V + + T + A V H
Sbjct: 183 WRVTRDNQQFAFEYQDNEGQTQSEALTLKVGDSLEEVATYINAQQSVVDASVTQDHQLQF 242
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
ST K + + + + + +S +D IK +
Sbjct: 243 FTSTLNAPEGVTWKGNFADEMDIGSGELVTVDDLDMSTVRGAQLAISVVDAAIKYVDSHR 302
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+IG +R+ D + + +V + GR+ D D A EST + Q Q L+
Sbjct: 303 SEIGGFQNRVSGTIDNLNTINRSVLESKGRIRDTDFARESTEMVRSQVLQDATTALLAQA 362
Query: 440 NNSTARILSLF 450
+ L L
Sbjct: 363 KQRPSSALGLL 373
>gi|47565427|ref|ZP_00236468.1| flagellin [Bacillus cereus G9241]
gi|47557417|gb|EAL15744.1| flagellin [Bacillus cereus G9241]
Length = 284
Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 3/181 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG R++ AAD+AA +IA M++ L
Sbjct: 3 INTNVNSMRTQEYMRQNQEKMNTSMNRLSSGKRINSAADDAAGLAIATRMRAKENGLGVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S G S + A + ++ +++ +++ G D +I E QL +Q+
Sbjct: 63 SRNTQDGISLIRTADSALNSVSNILLRMRDLAVQSANGTNSGDDRTAIDKEFGQLINQID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ ++FNG L + + S I DD G I+ + + L +
Sbjct: 123 YIAKNTAFNGTTLLNGSKDADDKPVKTSSIAIKTYDDGGAADISITLASANAVDLGLATE 182
Query: 181 T 181
Sbjct: 183 A 183
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 45/105 (42%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
A+ + +++++ IDT++K + +G+ +R+ + ++
Sbjct: 180 ATEASGTLTPTSVTAKDIITTIDTKLKDIATSRADLGATLNRLDFNVANLNSQASSMASS 239
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ DADMA E + ++ + + + LS N + + L +
Sbjct: 240 ASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 284
>gi|261863741|gb|ACY01344.1| flagellin [Clostridium difficile]
Length = 290
Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 75/203 (36%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN SA+ A+ ++ +++SSG+R+ AAD+AA +I++ M++ L
Sbjct: 3 VNTNVSALIANNQMGRNVSAQSKSMEKLSSGVRIKRAADDAAGLAISEKMRAQIKGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ G S V A+ + + +++ ++ + + I E+ QL+ ++
Sbjct: 63 GRNVQDGISVVQTAEGALEETGNILQRMRTLSLQSSNETNTAEERQKIADELLQLKDEVE 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ FNG+ L + + + N +I +
Sbjct: 123 RISSSIEFNGKKLLDGSSTEIRLQVGANYGTNVAGTTNNNNEIKVALVNTSSIMSKAGIT 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
+ + + + V
Sbjct: 183 SSTIASLNVDGASGTDAAKQMVS 205
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 54/140 (38%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
T+ T + + + +T + N D + A ++MVS +D
Sbjct: 150 NYGTNVAGTTNNNNEIKVALVNTSSIMSKAGITSSTIASLNVDGASGTDAAKQMVSSLDI 209
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+K + K+G+ +R+ ++ + + V R+ D D+ASE LS + Q
Sbjct: 210 ALKELNTSRAKLGAQQNRLESTQNNLNNTIENVTAAESRIRDTDVASEMVNLSKMNILVQ 269
Query: 431 LAVQALSIVNNSTARILSLF 450
+ L+ N +L L
Sbjct: 270 ASQSMLAQANQQPQGVLQLL 289
>gi|89092143|ref|ZP_01165098.1| Flagellin-like [Oceanospirillum sp. MED92]
gi|89083878|gb|EAR63095.1| Flagellin-like [Oceanospirillum sp. MED92]
Length = 415
Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats.
Identities = 51/437 (11%), Positives = 116/437 (26%), Gaps = 39/437 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T ++ + + ++ Q ++S+G +V +D+ + Q K +
Sbjct: 3 ISTQQVFLNNIDNISKTSADVFKTQQQLSTGKKVLQPSDDPLASAQIQKFKKEIARTEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ I + ++ + + + + + ++ G TD +I SE+ Q+ L
Sbjct: 63 NSNIEVSERRLQLEENTIEQINNQSIRLRELTIQGKTGTLNDTDRAAIASEVDQIIKSLD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ GE + G + G ++ + + + + +
Sbjct: 123 GLMNTKDVQGEFLFSGNKGFTEPYTIDPRTGRYVFNGDDGQRFLQVGPETKVASTDSGFD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T I Q + ++ DA + ++ L T + T
Sbjct: 183 IFETVPKVSGYVIADINQTSQQIASNEIKDADAFDAFTVERGALQITFNDGAGTFSVTDS 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
Q P + K
Sbjct: 243 QTPPQPVSSDDTPPVVLTNVAFNDGDVIKVAGT--------------------------- 275
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
VGN + L +D + + T D +NE++
Sbjct: 276 -------ELTVGNITADSTITVDAISQHNILNTALDLKAELENADFTTQEGKDKFNERMD 328
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ + + IG + + Q + + D D +
Sbjct: 329 H--ILENLSGIEELNVGTRANIGGRLNTLEQQMSVNTDYELFTTESLSAFEDLDYNEAIS 386
Query: 421 RLSALQTQQQLAVQALS 437
+ QT Q A + +
Sbjct: 387 QFQLQQTVLQAAYSSFA 403
>gi|30059918|gb|AAP13331.1| FliC [Escherichia coli]
Length = 568
Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 80/273 (29%), Gaps = 3/273 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ S + +S A A
Sbjct: 184 KAATVSDLTAAGATGTGPYAVTTNNTALSASDALSRLKTGDTVTTTGSSAAIYTYDAAKG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ + +GT+ S +
Sbjct: 244 NFTTQATVADGDVVNFANTLKPAAGTTASGVYT 276
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 39/317 (12%), Positives = 95/317 (29%)
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
D + + + +D + +
Sbjct: 252 ADGDVVNFANTLKPAAGTTASGVYTRSTGDVKFDVDANGDVTIGGKAAYLDATGNLSTNN 311
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + T + + T + + T+ + T+ + +A
Sbjct: 312 PGIASSAKLSDLFASGSTLATTGSIQLSGTTYNFGAAATSGVTYTKTVSADTVLSTVQSA 371
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A +G + + + ++ N++ + + T ++ N
Sbjct: 372 ATANTAVTGATIKYNTGIQSATASFGGVNTNGAGNSNDTYTDADKELTTTASYTINYNVD 431
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
T + + K + + +N T T+ + A ++ ++ +D I
Sbjct: 432 KDTGTVTVASNGAGATGKFAATVGAQAYVNSTGKLTTETTSAGTATKDPLAALDEAISSI 491
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G+I +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 492 DKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 551
Query: 436 LSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 552 LAKANQVPQQVLSLLQG 568
>gi|284810836|gb|ADB96214.1| FliC* [Yersinia enterocolitica]
Length = 369
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 71/209 (33%), Gaps = 3/209 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + + +
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTATDSSYDFQVGSKDNEQISIAIGKSSGWNLATAKADGTS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + +
Sbjct: 181 TDTVNTYAFTKKAALDTAQTDYDTANTAY 209
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 36/92 (39%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ ID +K +G+ +R + + + R+ DAD ++E
Sbjct: 278 TGTTPLADIDKALKAVDTQRSVLGASQNRFESTITNLNNTVNNLTSARSRIQDADYSTEV 337
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 338 SNMSRAQILQQAGTSVLAQANQVPQTVLSLLR 369
>gi|170791571|gb|ACB38427.1| flagellin A [Aeromonas popoffii]
gi|170791573|gb|ACB38428.1| flagellin A [Aeromonas popoffii]
gi|170791577|gb|ACB38430.1| flagellin A [Aeromonas popoffii]
Length = 303
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 77/203 (37%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + N +L+ R++SGLR++ A D+AA IA + S L
Sbjct: 5 INTNVSSLNAQRNLMNTNKSLDTSYTRLASGLRINSAKDDAAGLQIANRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E TQL +++
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYTQLMTEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A+ ++F G+N L+ S A + R TV +S
Sbjct: 125 RVAKDTTFGGQNLLKGGYVGSFQVGADAGQTITFRMTTAFTISGMASATSGSATVTTTTS 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
+ +
Sbjct: 185 GEPYTVTRTAGTPVSSTSMSTIT 207
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 68/239 (28%)
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + T GA + + + +
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYTQLMTEID 124
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ G + + + +D G T + T + + ++ +
Sbjct: 125 RVAKDTTFGGQNLLKGGYVGSFQVGADAGQTITFRMTTAFTISGMASATSGSATVTTTTS 184
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + + ++ +D IK + ++G++ +R
Sbjct: 185 GEPYTVTRTAGTPVSSTSMSTITAASSAQSAMANLDYMIKVVDSKRAELGAVQNRFDSTI 244
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + V R+ DAD A+E+ L+ QQ A LS N LSL +G
Sbjct: 245 RNQANVSENVSAARSRIRDADFATETANLTKQNILQQAASTILSQANQRPQSALSLLQG 303
>gi|328543144|ref|YP_004303253.1| Bacterial flagellin N-terminus domain protein [polymorphum gilvum
SL003B-26A1]
gi|326412890|gb|ADZ69953.1| Bacterial flagellin N-terminus domain protein [Polymorphum gilvum
SL003B-26A1]
Length = 501
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 70/500 (14%), Positives = 149/500 (29%), Gaps = 50/500 (10%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ + + L++ + Q+R+++GL+V+ A DN + A + L
Sbjct: 1 MSDIVLSSAVRENLLSLKNTASLMSTTQNRLATGLKVNTALDNPNSYFTAAGLNDRAKDL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQ 118
+ + D +G + A G++ ++ + K + + K L SQ
Sbjct: 61 NNLLDNMGQAVQTIKAADNGITSITKLVESAKAIANQALQTQSEYERKVYAERYNDLLSQ 120
Query: 119 LRDIARGS--------------------------------SFNGENWLRTDLGSSTASIA 146
+ +AR + F A+ +
Sbjct: 121 IETLARDASYKGKNLLAGAGNDLTVIFNEDSTSNLKIKPVDFTDTTLENGLALYDLATGS 180
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + + +T + D + ++ D
Sbjct: 181 GATSSFSLAAGKTTLDLTGLQASSDLTDLADWANGDVVTITDGTTSKTFTVGSGPGQIRT 240
Query: 207 DVSV----------------YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
T+ + + S + A V
Sbjct: 241 VQDYVNAINSLGGLKASFDEGTDQITVVSGMASGLSLSISKDAAGGGNATNGGIGTGTTV 300
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
A A T + + G + V + + + TT +
Sbjct: 301 LTTTAMTANATLTSSGGYQVGDVLRIVDGNGYEAAALEISETTTVDDLVKLINGVKGLKA 360
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ + + + + + + A + + +E + I+
Sbjct: 361 GFSAGTISLIGDISFNLKSNNNDFNVGDLATTDGTVKLTAVDSDFKDDTDIERTLQAINA 420
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ + A G++ S + +++ F + + +E G G L ADM E + ALQT+QQ
Sbjct: 421 ALATLRSTASSFGTMLSTVEIRQKFTGQLINTLEVGAGALTIADMNQEGANMLALQTRQQ 480
Query: 431 LAVQALSIVNNSTARILSLF 450
L+ ALS+ N + +LSLF
Sbjct: 481 LSSTALSLANQAEQSVLSLF 500
>gi|312622128|ref|YP_004023741.1| flagellin domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202595|gb|ADQ45922.1| flagellin domain protein [Caldicellulosiruptor kronotskyensis 2002]
Length = 272
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++ +L N L +++SSG+R++ A D+AA +I++ M+ L+
Sbjct: 3 INNNVQALNTYNRLTINNDALAKSLEKLSSGMRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ D +++QSE+ QL ++
Sbjct: 63 IRNAQDGISLIQTAEGALNETHSILQRMRELAVQAANDTNTDADRQALQSEVDQLVKEID 122
Query: 121 DIARGSSFNGENWLRTD 137
IA + FN + L
Sbjct: 123 RIATTTQFNTKALLDGT 139
Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats.
Identities = 28/239 (11%), Positives = 63/239 (26%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ S + + A A N T
Sbjct: 34 MRINRAGDDAAGLAISEKMRGQIRGLNQAIRNAQDGISLIQTAEGALNETHSILQRMREL 93
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+A +++ + +T + +
Sbjct: 94 AVQAANDTNTDADRQALQSEVDQLVKEIDRIATTTQFNTKALLDGTVATTGLVFHIGANI 153
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + T + + + + + +S ID+ I+ + K+G+ +R+
Sbjct: 154 NQNITLTISDTQASALGLSGISISTQASANAAISTIDSAIQYISGVRAKLGAYQNRLEHT 213
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + + + R+ D DMA E + Q A L+ N +L L R
Sbjct: 214 INNLGVSSENLTAAESRIRDVDMAKEMMAFTKNNILMQAATAMLAQANQLPQAVLQLLR 272
>gi|228920470|ref|ZP_04083815.1| Flagellin [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228839100|gb|EEM84396.1| Flagellin [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 373
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++ + +R + DR+SSG R+++A+D+AA +IA MK+ G L+
Sbjct: 8 INTNINSLRTQEYMRQNQSKMSTAMDRLSSGKRINNASDDAAGLAIATRMKARQGGLNVA 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S + A + ++ +++ +++ T+ ++Q E TQL+ Q+
Sbjct: 68 ARNTQDGISLIRTADSALNSVSNILLRMRDLANQSATGTNTDTNKVALQKEFTQLKEQIN 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
IA + FN +N L
Sbjct: 128 YIAANTQFNDKNLLDGSSDQIKIQT 152
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 41/112 (36%)
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
I++ A V ID +K +G+ +R+ +K
Sbjct: 262 QTSFDTISKSATMPKAAADADALGAVKQIDVALKTIADNQATLGATLNRLEFNVTNLKSQ 321
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+++ ++ DADMA E + ++ + + + LS N + + L +
Sbjct: 322 ENSMASSASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 373
>gi|169950573|gb|ACB05819.1| flagellin [Clostridium botulinum]
Length = 275
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+ V
Sbjct: 3 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQV 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA + FN ++ + + ++
Sbjct: 123 RIASQTQFNTKSLINGAVSEDAKAMT 148
Score = 86.7 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 49/133 (36%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D ++ T + + I + + N + + + ++ ID+ I +
Sbjct: 143 DAKAMTFQIGANSGQTIKLTIGSMDAKTLKVDNIKLDDTAANITKQIATIDSAINSVSKE 202
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 203 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 262
Query: 439 VNNSTARILSLFR 451
N + +L L R
Sbjct: 263 ANQAPQGVLQLLR 275
>gi|114054868|gb|ABI50034.1| FlaA [Clostridium botulinum]
Length = 228
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 1 INXNLNAMNAHRNMGINXGNSGKAMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D +IQ E+T L S++
Sbjct: 61 SRNSQDGISLIQTAEGALNETHSILQRMRELSVQAANDTNVTVDRDAIQKELTSLTSEID 120
Query: 121 DIARGSSFNGENWLRTDLG 139
IA + FN +N L DLG
Sbjct: 121 RIATTTQFNEKNLLNGDLG 139
Score = 48.2 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 8/67 (11%), Positives = 22/67 (32%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
M + +T A ++ I+ IK + +G+ +R+ +
Sbjct: 162 AKMDSTALTITATNVKVGTNADATTSITNINNAIKEVSTQRSGLGAYQNRLEHTIANLDN 221
Query: 399 MRDAVEK 405
+ ++
Sbjct: 222 ASENLQA 228
>gi|238788343|ref|ZP_04632137.1| Flagellin [Yersinia frederiksenii ATCC 33641]
gi|238723589|gb|EEQ15235.1| Flagellin [Yersinia frederiksenii ATCC 33641]
Length = 383
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 3/229 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + + + + +
Sbjct: 121 EINRVTQQTDFNGIKVLDNRTATDSTYDFQVGAQDAQTIGIKIGASSGWNLAAANADGTS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
S + + + + ++ +T
Sbjct: 181 SDSINEYKFTTTPGLKTAQDAVKTATTAAATAEKAYNDALAVDPDTTST 229
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 38/97 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ A ++ ID +K +G+ +R + + + R+ DAD
Sbjct: 287 ADGTAAGTTPLADIDKALKAVDTQRSVLGASQNRFESTITNLNNTTNNLTSARSRIQDAD 346
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++E + +S Q QQ L+ N +LSL R
Sbjct: 347 YSTEVSNMSRAQILQQAGTSVLAQANQVPQTVLSLLR 383
>gi|170791533|gb|ACB38408.1| flagellin A [Aeromonas hydrophila subsp. dhakensis]
Length = 303
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 77/203 (37%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + N +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNLMNTNKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E TQL +++
Sbjct: 65 NRNANDGISVAQTAEGAMDEITSMLQRMRTLAQQSANGSNNTDDRTALQQEYTQLMTEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A+ ++F G+N L+ S A + R TV ++
Sbjct: 125 RVAKDTTFGGQNLLKGGYVGSFQVGADAGQTITFRMTTAFSISGMASATSGSATVATTTT 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
+ +
Sbjct: 185 GEPYTITRTAGTPVTSTSMSTIT 207
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/239 (12%), Positives = 68/239 (28%)
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + T GA + + + +
Sbjct: 65 NRNANDGISVAQTAEGAMDEITSMLQRMRTLAQQSANGSNNTDDRTALQQEYTQLMTEID 124
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ G + + + +D G T + + + + ++ +
Sbjct: 125 RVAKDTTFGGQNLLKGGYVGSFQVGADAGQTITFRMTTAFSISGMASATSGSATVATTTT 184
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + + ++ +D IK + ++G++ +R
Sbjct: 185 GEPYTITRTAGTPVTSTSMSTITAASSAQSAMANLDYMIKVVDSKRAELGAVQNRFDSTI 244
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + V R+ DAD A+E+ L+ QQ A LS N LSL +G
Sbjct: 245 RNQANVSENVSAARSRIRDADFATETANLTKQNILQQAASTILSQANQRPQSALSLLQG 303
>gi|168183205|ref|ZP_02617869.1| flagellin protein [Clostridium botulinum Bf]
gi|237796166|ref|YP_002863718.1| flagellin [Clostridium botulinum Ba4 str. 657]
gi|169950569|gb|ACB05817.1| flagellin [Clostridium botulinum]
gi|169950584|gb|ACB05823.1| flagellin [Clostridium botulinum]
gi|169950592|gb|ACB05825.1| flagellin [Clostridium botulinum]
gi|169950594|gb|ACB05826.1| flagellin [Clostridium botulinum]
gi|169950600|gb|ACB05829.1| flagellin [Clostridium botulinum]
gi|169950606|gb|ACB05832.1| flagellin [Clostridium botulinum]
gi|182673612|gb|EDT85573.1| flagellin protein [Clostridium botulinum Bf]
gi|229263816|gb|ACQ54849.1| flagellin [Clostridium botulinum Ba4 str. 657]
Length = 275
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA + FN ++ + + ++
Sbjct: 123 RIASQTQFNTKSLINGAVSEDAKAMT 148
Score = 86.3 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 49/133 (36%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D ++ T + + I + + N + + + ++ ID+ I +
Sbjct: 143 DAKAMTFQIGANSGQTIKLTIGSMDAKTLKVDNIKLDDTAANITKQIATIDSAINSVSKE 202
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 203 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 262
Query: 439 VNNSTARILSLFR 451
N + +L L R
Sbjct: 263 ANQAPQGVLQLLR 275
>gi|42522199|ref|NP_967579.1| flagellin [Bdellovibrio bacteriovorus HD100]
gi|39574730|emb|CAE78572.1| flagellin [Bdellovibrio bacteriovorus HD100]
gi|48927377|emb|CAG38105.1| flagellin [Bdellovibrio bacteriovorus]
Length = 277
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 80/203 (39%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN SA++A + + + + +++SG R++ AAD+AA +I++ +KS +L
Sbjct: 5 ISTNVSAINAQRTMVNSQREIGKSMSQLASGSRINKAADDAAGLAISENLKSQIRSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
S G S V A+ G+S+ ++++ ++ T+ + E+ QL+S+ +
Sbjct: 65 SRNANDGISMVQTAEGGLSEISNILTRMRELGVQASSDTIGDTERGFLDKEVQQLKSEAQ 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + + F L S + + R + L + S
Sbjct: 125 RITQTTRFGTTKLLDGSGDSFDFQVGINNDPEADRISFNAGETNASTSSLGIDGFDFSSK 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
T + +D +
Sbjct: 185 TGAQDALAAIDTAQSQVNGYRAN 207
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 46/126 (36%)
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+++ + + + + + ++ K ++ ++ IDT +G+
Sbjct: 151 INNDPEADRISFNAGETNASTSSLGIDGFDFSSKTGAQDALAAIDTAQSQVNGYRANLGA 210
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
+ +R+ D + + + + R+ D D+A+ + + Q Q LS N
Sbjct: 211 LQNRLQSTVDNLGVQHENISAANSRIRDTDVAAATAETTRNQVLLQANTSVLSQANAMPN 270
Query: 445 RILSLF 450
L L
Sbjct: 271 SALRLI 276
>gi|284810833|gb|ADB96212.1| FliC [Yersinia enterocolitica]
Length = 369
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 71/209 (33%), Gaps = 3/209 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + + +
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTATDSSYDFQVGSKDNEQISIAIGKSSGWNLATAKADGTS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + +
Sbjct: 181 TDTVNTYAFTKKAALDTAQTDYDTANTAY 209
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 36/92 (39%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ ID +K +G+ +R + + + R+ DAD ++E
Sbjct: 278 TGTTPLADIDKALKAVDTQRSVLGASQNRFESTITNLNNTVNNLTSARSRIQDADYSTEV 337
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +S Q QQ L+ N +LSL R
Sbjct: 338 SNMSRAQILQQAGTSVLAQANQVPQTVLSLLR 369
>gi|255099403|ref|ZP_05328380.1| flagellin subunit [Clostridium difficile QCD-63q42]
gi|255305260|ref|ZP_05349432.1| flagellin subunit [Clostridium difficile ATCC 43255]
gi|261863727|gb|ACY01337.1| flagellin [Clostridium difficile]
gi|261863733|gb|ACY01340.1| flagellin [Clostridium difficile]
gi|261863735|gb|ACY01341.1| flagellin [Clostridium difficile]
gi|261863737|gb|ACY01342.1| flagellin [Clostridium difficile]
gi|261863739|gb|ACY01343.1| flagellin [Clostridium difficile]
Length = 290
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 74/203 (36%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN SA+ A+ ++ +++SSG+R+ AAD+AA +I++ M++ L
Sbjct: 3 VNTNVSALIANNQMGRNVNAQSKSMEKLSSGVRIKRAADDAAGLAISEKMRAQIKGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ G S V A+ + + +++ ++ + + I E+ QL+ ++
Sbjct: 63 GRNVQDGISVVQTAEGALEETGNILQRMRTLSVQSSNETNTAEERQKIADELLQLKDEVE 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ FNG+ L + + + N +I +
Sbjct: 123 RISSSIEFNGKKLLDGSSTEIRLQVGANFGTNVAGTSNNNNEIKVALVNTSSIMSKAGIT 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
+ + + V
Sbjct: 183 SSTIASLNADGTSGTNAAKQMVS 205
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 54/137 (39%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T+ + + + + +T + N D + A ++MVS +D +K
Sbjct: 153 TNVAGTSNNNNEIKVALVNTSSIMSKAGITSSTIASLNADGTSGTNAAKQMVSSLDVALK 212
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ K+G+ +R+ ++ + + V R+ D D+ASE LS + Q +
Sbjct: 213 ELNTSRAKLGAQQNRLESTQNNLNNTIENVTAAESRIRDTDVASEMVNLSKMNILVQASQ 272
Query: 434 QALSIVNNSTARILSLF 450
L+ N +L L
Sbjct: 273 SMLAQANQQPQGVLQLL 289
>gi|84778146|dbj|BAE73109.1| flagellin homolog [Sphingomonas sp. A1]
Length = 383
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 3/198 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I TN +++A + + +L R+SSGLR++ A D+AA +I+ M + L+
Sbjct: 4 TINTNVQSLNAQRNITSTQNSLSTSLQRLSSGLRINSAKDDAAGLAISDRMTAQIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ + + + + I+ TD ++Q+E+TQLQS++
Sbjct: 64 AQRNANDGISLAQTAEGALGEISNNLQRIRELAVQASNGTNTQTDRDALQAEVTQLQSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ +A +SFNG+ L I + + Q ++ L T +D+
Sbjct: 124 QRVAEQTSFNGQKLLDGSFNGVQFQIGANAGETIGVSKIMNAQTASLGGSLTRTTSTIDA 183
Query: 180 STDGTERYGLLDRNHKIK 197
+ + + I
Sbjct: 184 TDLTKYDTAMAAGDLTIN 201
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 44/379 (11%), Positives = 99/379 (26%), Gaps = 1/379 (0%)
Query: 73 KVDIAKAGMSKAIDVMSTIKNKITAGVE-RGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
++ ++ ++ ST + T+ + + + + +
Sbjct: 4 TINTNVQSLNAQRNITSTQNSLSTSLQRLSSGLRINSAKDDAAGLAISDRMTAQIKGLTQ 63
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
+ G S A A+ +G + ++ D+ +
Sbjct: 64 AQRNANDGISLAQTAEGALGEISNNLQRIRELAVQASNGTNTQTDRDALQAEVTQLQSEI 123
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
+ + K +D S I + S + +
Sbjct: 124 QRVAEQTSFNGQKLLDGSFNGVQFQIGANAGETIGVSKIMNAQTASLGGSLTRTTSTIDA 183
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+G V + + +
Sbjct: 184 TDLTKYDTAMAAGDLTINGVDVGKIDAASTAQERAAQLTEAINRVSSQTNVGASYDKTTG 243
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
T + + + + T T N+ + ++ ++ ID
Sbjct: 244 QVTLTSNAAIAVAGAANDATVAGWANNATTGTATTTTGINSLTVSSFTNAQQTITQIDNA 303
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+K A +G++ +R ++ M + + GR+ DAD ASE+ LS Q QQ
Sbjct: 304 LKDINTARADLGAVQNRFTSTVANLQSMTENLSSARGRVTDADFASETANLSRAQILQQA 363
Query: 432 AVQALSIVNNSTARILSLF 450
L+ N ++L L
Sbjct: 364 GTAMLAQANALPQQVLKLL 382
>gi|1580775|emb|CAA67102.1| flagellin [Pseudomonas aeruginosa]
Length = 434
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 58/434 (13%), Positives = 124/434 (28%), Gaps = 36/434 (8%)
Query: 46 YWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERG 102
IA + S L+ + G S A+ + ++ +++ I++
Sbjct: 1 GLQIANRLSSQISGLNVATRNANDGISLAQTAEGALQQSTNILQRIRDLALQSANGSNSD 60
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
D +Q E+ Q++L I+ ++F G L G+++ + + +
Sbjct: 61 ADRAVLQKEVAAQQAELTRISDTTTFGGRKLLDGSFGTTSFQVGSNAYETIDISLQNVSA 120
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
Y + +S GT + V +K+ID++ D++ I+ K
Sbjct: 121 SAIGSYQVGSNGAGTVASVAGTATASGIASGTVNLVGGGQVKNIDIAAGDSAKAIAEKMD 180
Query: 223 KLATTSG---------------------------------AWLKAANATFDQAKGIATIP 249
+ + +
Sbjct: 181 GAIPNLSARARTVFTADVSGVTGGSLNFVVTVGCNTVSLAGVTSTQDLADQLNSNSSKLG 240
Query: 250 VPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ T + +G A + T + + K + T A
Sbjct: 241 ITASINDKGVLTITSATGENVKFGAQTGTATAGQVAVKVQGSDGKFEAAAKNVVAAGTAA 300
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
YV S T S + + + + + + ++ +D
Sbjct: 301 TTTTVTGYVQLNSPTAYSVSGTGTQASQIFGNASAAQKSSVASVDISTADGAQNAIAVVD 360
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ A +G++ +R + + + R+ DAD A++S LS Q Q
Sbjct: 361 NTLAAIDAQRADLGAVQNRFKNTMRNLTNIWENATDARSRIKDADFAADSAALSKNQVLQ 420
Query: 430 QLAVQALSIVNNST 443
Q L+ N
Sbjct: 421 QAGTAILAQDNQLP 434
>gi|315187003|gb|EFU20760.1| flagellin domain protein [Spirochaeta thermophila DSM 6578]
Length = 282
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 75/179 (41%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ A++ L + + + +++SSGLR++ AAD+AA +I++ M+S L+
Sbjct: 3 INHNMSALYANRTLAERDTAITKNIEKLSSGLRITRAADDAAGLAISEKMRSQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ I S + ++ + + D++ ++ D IQ E++QL ++
Sbjct: 63 ARNIQDAVSFIQTSEGYLQETQDILHRLRELSVQAANGIYSDEDRLQIQVEVSQLVDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FNG N L + +G+ + T L
Sbjct: 123 RIASHAQFNGMNLLTGGFAPNGPRSLTIQVGANMDQQERIYIGTMTAEALLGGQNAGAG 181
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 46/133 (34%)
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
+D ++ + + +++ + + + +DT ++ +
Sbjct: 149 TIQVGANMDQQERIYIGTMTAEALLGGQNAGAGALVSISTPEDANRTIGQVDTALRIVSK 208
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G+ +R + + + + ++ R+ D DMASE Q Q L+
Sbjct: 209 QRADLGAYQNRFEMAWKGVSVAAENIQAAESRIRDVDMASEMVEYVKNQILTQANTAMLA 268
Query: 438 IVNNSTARILSLF 450
N T +L L
Sbjct: 269 QANMKTQSVLQLL 281
>gi|168177580|ref|ZP_02612244.1| flagellin protein [Clostridium botulinum NCTC 2916]
gi|182670628|gb|EDT82602.1| flagellin protein [Clostridium botulinum NCTC 2916]
Length = 283
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM A + + +R++SG+R++ A+D+ A +I++ M++ L
Sbjct: 3 INHNVNAMIAYRNIMINGALAGKAMERLASGMRINKASDDPAGLAISEKMRAQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + G S + +A+ G+ + ++ ++ D +IQ EI QL +
Sbjct: 63 SRNVQDGISMIQVAEGGVKEIQSMLQRMRELAVQAANGTNSPEDRNNIQDEINQLTRGID 122
Query: 121 DIARGSSFNGENWLRTDLGS 140
DIA+G+ FN L + +
Sbjct: 123 DIAKGTEFNTIKLLNANAAN 142
Score = 84.0 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 43/117 (36%)
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + +N + + + D I A++ +G+ S+ + + +
Sbjct: 163 QNMNSTALGINGDKDNYGVDVSTSEKASAAIKVFDDAINKASSFMSSLGASSNMLEHRIN 222
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+++ + + R+ D DMA E + QQ+A S V + L +
Sbjct: 223 YLENTIGNLTEAESRIRDTDMAKEMMNYTKYSVLQQVAQAIFSQVLKQQESTIQLLK 279
>gi|149928172|ref|ZP_01916418.1| flagellin-like protein [Limnobacter sp. MED105]
gi|149823157|gb|EDM82395.1| flagellin-like protein [Limnobacter sp. MED105]
Length = 288
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 74/208 (35%), Gaps = 3/208 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ A L +LE R+SSGLRV+ + D+AA +IA+ M +
Sbjct: 1 MLGINTNAPSLGAQNNLSRSAGSLETSIARLSSGLRVNSSKDDAAGLAIAERMTAQIRGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQS 117
+ G S + +A + K D + ++ TD ++ E T+L +
Sbjct: 61 DVAARNANDGISLLQVADGALGKITDNLQRMRELGVQAKNGTLNDTDRLNLNREFTELAN 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +A G++FN N S I + + N L
Sbjct: 121 EVGRVATGTTFNDNNVFSAAQKSVELQIGSGNDAADTLNVNLTDDGLAAGNDLQTTLGGA 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ T G+ + +
Sbjct: 181 TQAAIVTAFGGVDTAANAETAIDTIDTA 208
Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 45/137 (32%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ DT + L + E + IDT I
Sbjct: 152 NDAADTLNVNLTDDGLAAGNDLQTTLGGATQAAIVTAFGGVDTAANAETAIDTIDTAIDD 211
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
T +G+ SR+ ++ + GR++DAD A E+ L+ Q QQ
Sbjct: 212 ITNLRATVGAGLSRLEQVVGSLETTSSNLSSARGRIMDADFAKETANLTRSQILQQAGTA 271
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 272 MLAQANQLPNNVLSLLR 288
>gi|114054803|gb|ABI50002.1| FlaA [Clostridium botulinum]
Length = 272
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 1 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 61 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I+ + FN ++ + + ++
Sbjct: 121 RISSQTQFNTKSLINGAVSEDAXAMT 146
Score = 84.4 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 45/132 (34%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D + T + + I + + + + + ++ ID I +
Sbjct: 141 DAXAMTFQIGANSGQTIKLTIGSMDAKTLKVDKIKLDDTAANVTKQIATIDNAINSVSKE 200
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 201 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 260
Query: 439 VNNSTARILSLF 450
N + +L L
Sbjct: 261 ANQAPQGVLQLL 272
>gi|254230130|ref|ZP_04923525.1| polar flagellin FlaE [Vibrio sp. Ex25]
gi|262394929|ref|YP_003286783.1| flagellin protein flaE [Vibrio sp. Ex25]
gi|151937323|gb|EDN56186.1| polar flagellin FlaE [Vibrio sp. Ex25]
gi|262338523|gb|ACY52318.1| flagellin protein flaE [Vibrio sp. Ex25]
Length = 374
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 84/229 (36%), Gaps = 4/229 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN +AM A + L Q ++SG R++ A+D+AA I+ + L
Sbjct: 1 MVSLNTNVAAMVAQRHLSQAAAQNVESQRNLTSGFRINSASDDAAGLQISNTLHVQTRGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQS 117
S A+ + ++ D++ +++ G +D +SIQ E+ LQ
Sbjct: 61 DVALRNAHDAYSVAQTAEGALHESSDILQRLRSLGLQAANGSNDTSDRQSIQYEVVALQD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L +A ++F +N GS + I + + L +
Sbjct: 121 ELDRVAITTTFADKNLFDGSYGSQSFHIGANANSISLT-LRNMRSHIPEMGGLHYVGDAV 179
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
D T+ L ++ + I + + D ++T +
Sbjct: 180 DKDWRVTKDNQTLKVEYQDSKGQTQTESIGLKLGDRVEQVATYINAQQS 228
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 39/100 (39%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + + + ID IK + +IGS +R++ D + + +V + R+
Sbjct: 274 DDIDMSTAGKAQLSIGVIDAAIKYVDSHRSEIGSFQNRVNGSVDNLNTVNRSVTESKSRI 333
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D D A EST + Q Q L+ + L L
Sbjct: 334 RDTDFARESTEMVRSQVLQDATTALLAQAKQRPSSALGLL 373
>gi|315930309|gb|EFV09403.1| Flagellin B [Campylobacter jejuni subsp. jejuni 305]
Length = 370
Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 92/279 (32%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGGRISSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ K + ++
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGTGLGALAEEINKSADKTGVRATFTVETRGIAAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + G + + S
Sbjct: 245 RAGTTSDTFAINGVTIGQVAYEDGDANGALVAAINSVKD 283
>gi|194014726|ref|ZP_03053343.1| flagellin [Bacillus pumilus ATCC 7061]
gi|194013752|gb|EDW23317.1| flagellin [Bacillus pumilus ATCC 7061]
Length = 304
Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 42/105 (40%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
T+ A A + + + +D IK + K+G++ +R+ + + + +
Sbjct: 200 TKFAANAADVADVGFDAQLGIVDGAIKQVSTQRSKLGAVQNRLEHTINNLGASGENLTAA 259
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D DMA E + + Q + L+ N +L L R
Sbjct: 260 ESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQQPQNVLQLLR 304
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 73/190 (38%), Gaps = 10/190 (5%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ +L N + + +++SSGL+++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTLNRLSANNASSQKNMEKLSSGLKINRAGDDAAGLAISEKMRGQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK----SIQSEITQLQSQL 119
+ G S + IA+ +++ ++ ++ + GT +IQ EI L ++
Sbjct: 63 TKNAQDGISLIQIAEGALTETHSILQRVRELVVQAGNTGTQDDTDLGAIQEEIKALVEEI 122
Query: 120 ------RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE 173
I+ + FNG+ L S+ IG+ L
Sbjct: 123 GNGADKNGISDRTEFNGKKLLDGSFSSTGTDSLTFQIGANGAQQLSVNIEAMSADKLGAT 182
Query: 174 TVLLDSSTDG 183
+
Sbjct: 183 LPDGTLVANQ 192
>gi|167770243|ref|ZP_02442296.1| hypothetical protein ANACOL_01586 [Anaerotruncus colihominis DSM
17241]
gi|167667565|gb|EDS11695.1| hypothetical protein ANACOL_01586 [Anaerotruncus colihominis DSM
17241]
Length = 523
Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 84/182 (46%), Gaps = 3/182 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ +N A++A ++L N ++ +++SSG R++ A D+A+ +I++ MK+ L
Sbjct: 4 VVRSNIMAVNAQRQLGMNNSSVGKALEKLSSGYRINRAGDDASGLAISEKMKAQIKGLDT 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQL 119
S G S V A+ +++ ++++ + T G+ + +S+Q EI +LQ+++
Sbjct: 64 ASLNAQDGVSVVQTAEGALTEVHNMLNRMTELATRAANGINSDQNRQSLQDEIKELQTEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I++ ++FN N L LG T+ A + N + +
Sbjct: 124 DRISKATNFNSINLLDGSLGGGTSGAAGVPAINGDGLGNLTETAANAGNTVIGKAAFTAQ 183
Query: 180 ST 181
+
Sbjct: 184 NN 185
Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats.
Identities = 34/366 (9%), Positives = 86/366 (23%)
Query: 86 DVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
D + + + ++ + S +G + +A
Sbjct: 158 DGLGNLTETAANAGNTVIGKAAFTAQNNLKAGDSLTYSLTVSEDGTAKVIDITLEVSADG 217
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
G + ++ D + + + I + +V +
Sbjct: 218 KSLTYNGESVSALGTTNQASDTEQAKALAAAINKHADLKKSFTAAENAGDITLTHKVKGE 277
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
S+ + K T+ A + A+ +
Sbjct: 278 SAPSISLIEAPAAAGAEKATATTVTKGTDAFQSGAPVSDQVFTVNGKKFMFASSADKAAA 337
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL 325
+ V +A I + + K + + K +
Sbjct: 338 ADPNVTVVVQAAGTIAEDDLEKMAALIEKETGYKPTVNGTNFEWKSDAKNGKAGNGLVLQ 397
Query: 326 DSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
+ + + + + I I +A +G+
Sbjct: 398 IGDTADSFNQITVSIDDMSSKGIGVAGLDISSREGAAAAIDTIRAGIDKVSAQRAVLGAT 457
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445
+R+ + + + ++ R+ D DMA + + Q A L+ N
Sbjct: 458 QNRLEYTINNLDTTSENIQAANSRIRDTDMAKMMMEYTKMNVLTQSAQAMLAQANQQPQS 517
Query: 446 ILSLFR 451
+L L +
Sbjct: 518 VLQLLQ 523
>gi|125974722|ref|YP_001038632.1| flagellin-like protein [Clostridium thermocellum ATCC 27405]
gi|256005620|ref|ZP_05430578.1| flagellin domain protein [Clostridium thermocellum DSM 2360]
gi|281418809|ref|ZP_06249828.1| flagellin domain protein [Clostridium thermocellum JW20]
gi|125714947|gb|ABN53439.1| flagellin-like protein [Clostridium thermocellum ATCC 27405]
gi|255990378|gb|EEU00502.1| flagellin domain protein [Clostridium thermocellum DSM 2360]
gi|281407893|gb|EFB38152.1| flagellin domain protein [Clostridium thermocellum JW20]
gi|316941856|gb|ADU75890.1| flagellin domain protein [Clostridium thermocellum DSM 1313]
Length = 273
Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 83/263 (31%), Gaps = 3/263 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A +A ++L+ E +++SSG R++ A D+AA SI++ M++ L
Sbjct: 3 INNNIMAYNAHRQLKVNASAQEKSLEKLSSGYRINRAGDDAAGLSISEKMRAQIRGLQMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D +IQ EI +L ++
Sbjct: 63 SKNAQDGISLIQTAEGALTETHAILQRMRELAVQAANDTNVTKDRSAIQLEINELAEEVT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN L L A + +T + V +
Sbjct: 123 RIAEKTQFNTRTLLAGGLKDDGAVTIQIGANKGETLSIEIGTMTAAKLSVSGLVVSTSAW 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
N ++ + + + + A+ S
Sbjct: 183 AQSAISKIDAAINTVSTERARLGAKQNRLEHTIKNLDTAAENLQASESRIRDVDMAQEMM 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTS 263
+ A A N
Sbjct: 243 NFTKNNILNQAATAMLAQANMVP 265
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 35/96 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +S ID I + ++G+ +R+ + + ++ R+ D D
Sbjct: 177 VSTSAWAQSAISKIDAAINTVSTERARLGAKQNRLEHTIKNLDTAAENLQASESRIRDVD 236
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA E + Q A L+ N +L L
Sbjct: 237 MAQEMMNFTKNNILNQAATAMLAQANMVPQGVLQLL 272
>gi|170791589|gb|ACB38436.1| flagellin A [Aeromonas salmonicida subsp. salmonicida]
gi|170791591|gb|ACB38437.1| flagellin A [Aeromonas salmonicida subsp. salmonicida]
Length = 303
Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats.
Identities = 41/195 (21%), Positives = 75/195 (38%), Gaps = 3/195 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + N +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNLMNTNKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E TQL +++
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYTQLMTEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A+ ++F G+N L S A + R TV +S
Sbjct: 125 RVAKDTTFGGQNLLSGGYVGSFQVGADAGQTITFRMTTAFTISGMASATSGSATVTTTAS 184
Query: 181 TDGTERYGLLDRNHK 195
+
Sbjct: 185 GEPYLVTKNPGTAVT 199
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 70/239 (29%)
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + T GA + + + +
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYTQLMTEID 124
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ G + + + +D G T + T + + ++ +
Sbjct: 125 RVAKDTTFGGQNLLSGGYVGSFQVGADAGQTITFRMTTAFTISGMASATSGSATVTTTAS 184
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ A+ + + + ++ +D IK + ++G++ +R
Sbjct: 185 GEPYLVTKNPGTAVTSASMSSIQAASSAQSAMANLDYMIKVVDSKRAELGAVQNRFDSTI 244
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + V R+ DAD A+E+ L+ QQ A LS N LSL +G
Sbjct: 245 RNQANISENVSAARSRIRDADFATETANLTKQNILQQAASTILSQANQRPQSALSLLQG 303
>gi|119469958|ref|ZP_01612763.1| flagellin [Alteromonadales bacterium TW-7]
gi|119446668|gb|EAW27941.1| flagellin [Alteromonadales bacterium TW-7]
Length = 324
Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 72/181 (39%), Gaps = 3/181 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN SA++A ++L + L+ R+SSG+R++ A D+AA I+ + S L+
Sbjct: 5 VNTNVSALNAQRQLNNSGNALDTSFQRLSSGMRINSAKDDAAGLQISDRLTSQVNGLNQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ + + + I+ D +IQ EI L S++
Sbjct: 65 NRNANDGISLAQTAEGALDEVTSMFQRIRTLAQQASNGSNTDEDRLAIQEEIRSLSSEVN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A ++F G+N L +S A +V + + + L
Sbjct: 125 RVAEDTTFGGQNLLDGSYKASFQVGADAVQTIGFSMKDVGTTASGPNTISANGGFTLSGI 184
Query: 181 T 181
Sbjct: 185 A 185
Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 40/96 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + +++ +D+ I ++G++ +R + + + R+ D D
Sbjct: 228 VSTQGNAQFVLAGMDSLIAVVDKKRAELGAVQNRFQSTIRNQSNISENLSAARSRIKDTD 287
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A+E+ L+ +Q QQ + L N LSL
Sbjct: 288 FAAETANLTKMQILQQASQTILGQANQRPQAALSLL 323
>gi|32267295|ref|NP_861327.1| flagellin B [Helicobacter hepaticus ATCC 51449]
gi|32263348|gb|AAP78393.1| minor flagellin subunit FlaB [Helicobacter hepaticus ATCC 51449]
Length = 514
Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats.
Identities = 41/176 (23%), Positives = 76/176 (43%), Gaps = 3/176 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN SA++A N +L +++SSGLR++ AAD+A+ +IA ++S + +L
Sbjct: 5 INTNISALTAHTIGVQNNRSLHNSLEKLSSGLRLNKAADDASGMAIADSLRSQSESLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ +A M + + ++ TIK K + K++QS+I +L +L
Sbjct: 65 VRNANDAIGMIQVADKAMDEQLKILDTIKTKAIQAAQDGQSNETRKALQSDIIRLLEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+IA +S+NG+ L + I + L+ +
Sbjct: 125 NIANTTSYNGQQMLSGAFSNKEFQIGAYSNTTVKASIGPTSSDKIGHVRLESGSFG 180
>gi|149928174|ref|ZP_01916420.1| flagellin-like protein [Limnobacter sp. MED105]
gi|149823159|gb|EDM82397.1| flagellin-like protein [Limnobacter sp. MED105]
Length = 288
Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 73/208 (35%), Gaps = 3/208 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ A L +LE R+SSGLRV+ A D+AA +IA+ M +
Sbjct: 1 MLGINTNAPSLGAQMNLSKSAGSLETSIARLSSGLRVNSAKDDAAGLAIAERMTAQIRGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQS 117
+ G S + +A + K D + ++ TD ++ E T+L +
Sbjct: 61 DVAARNANDGISLLQVADGALGKITDNLQRMRELGVQAKNGTLNDTDRVNLNREFTELAN 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +A G++FN N S I S N L
Sbjct: 121 EVGRVATGTTFNDNNVFSAAQKSVELQIGSGNAASDTLAVNLTDDGLAAGNDLQTTLGGA 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ T G+ + +
Sbjct: 181 TQAAIVTAFGGVDTAANAETAIDTIDTA 208
Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 45/137 (32%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ DT + L + E + IDT I
Sbjct: 152 NAASDTLAVNLTDDGLAAGNDLQTTLGGATQAAIVTAFGGVDTAANAETAIDTIDTAIDD 211
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
T +G+ SR+ ++ + GR++DAD A E+ L+ Q QQ
Sbjct: 212 ITNLRATVGAGLSRLEQVVGSLETTSSNLSSARGRIMDADFAKETANLTRSQILQQAGTA 271
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 272 MLAQANQLPNNVLSLLR 288
>gi|28211369|ref|NP_782313.1| flagellin [Clostridium tetani E88]
gi|28203810|gb|AAO36250.1| flagellin [Clostridium tetani E88]
Length = 275
Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRQMGINIGNAGKATEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ +K D ++Q EI +LQS++
Sbjct: 63 SRNAQDGISLIQTAEGALNETHAILHRMKELTVQAANDTNVTVDKDNLQLEIKELQSEIN 122
Query: 121 DIARGSSFNGENWLRTDLG 139
IA + FN + L L
Sbjct: 123 RIASQTQFNTKTLLNGSLS 141
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/268 (11%), Positives = 71/268 (26%)
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
I + + + + ++ ++ N A+
Sbjct: 8 NAMNAHRQMGINIGNAGKATEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQASRNAQ 67
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
++ A + + A ++ ++ I
Sbjct: 68 DGISLIQTAEGALNETHAILHRMKELTVQAANDTNVTVDKDNLQLEIKELQSEINRIASQ 127
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
T + N + + + + G + N ++
Sbjct: 128 TQFNTKTLLNGSLSKSALTFQIGANAGQTITLTIGDMTTSGLKLASINIGGAKGAASISS 187
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ IDT + + K+G+ +R+ + + ++ R+ D DMA E S
Sbjct: 188 QLKTIDTALNEVSKERAKLGANQNRLEHTIANVNNASENLQAAESRVRDVDMAKEMMNFS 247
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
QQ A L+ N + IL L R
Sbjct: 248 KNNILQQAAQAMLAQANQAPQGILQLLR 275
>gi|332305625|ref|YP_004433476.1| flagellin domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332172954|gb|AEE22208.1| flagellin domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 276
Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 3/160 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN S+++A+++L N NL +R+SSG R++ A D+AA I+ + + L+
Sbjct: 5 VNTNVSSLNATRQLFTSNNNLNTSFERLSSGFRINSAKDDAAGLQISNRLTTQVLGLNMA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQSQLR 120
G S A+ + + + I+ D ++Q E+ L+ ++
Sbjct: 65 VRNANDGISLAQTAEGALGEVTTALQRIRVLAVQAQNGINASADRLALQKEVDALKFEMS 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
IA + F G N L D S+ A I
Sbjct: 125 RIAATTQFGGVNILGGDYSSAFLVGANPGQTISINISRTN 164
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 28/215 (13%), Positives = 53/215 (24%)
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
I + A A T+ + +V A + +
Sbjct: 62 NMAVRNANDGISLAQTAEGALGEVTTALQRIRVLAVQAQNGINASADRLALQKEVDALKF 121
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ V + + S + +
Sbjct: 122 EMSRIAATTQFGGVNILGGDYSSAFLVGANPGQTISINISRTNGFGAAGLFDGEDISVAT 181
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ + I A +G+I +R + + + V R+ D D A
Sbjct: 182 VADASRAMVAVLEAISIIDAKRADLGAIQNRFQSTIRNLSNISENVSAARSRIRDTDFAV 241
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
E+ L+ Q QQ ++ L N L L +G
Sbjct: 242 ETAELTRWQIIQQASITVLGQANQRPQSALQLLQG 276
>gi|256833252|ref|YP_003161979.1| flagellin domain-containing protein [Jonesia denitrificans DSM
20603]
gi|256686783|gb|ACV09676.1| flagellin domain protein [Jonesia denitrificans DSM 20603]
Length = 295
Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI N +A+++ + L + +L +++SSG R++ AAD+AA +I++ ++S G L
Sbjct: 3 LSINQNIAAVNSYRNLANTQNDLSKSLEKLSSGFRINRAADDAAGLAISEGLRSQVGGLK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
+ G S V A+ +++ ++ +++ +I +E L S+
Sbjct: 63 VAARNAQDGISMVQTAEGALTETHAILQRLRDLAVQGANDSNNTEARANITTEAKSLVSE 122
Query: 119 LRDIARGSSFNGENWLRTDLG 139
L IA+ ++FNG L
Sbjct: 123 LGRIAQSTNFNGTTLLDGTKT 143
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 49/139 (35%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
NT+ + + D K VT +++ + + ID QI
Sbjct: 157 NTNSAITVDLARADVATVAAKLAVGAAGTVTGVNDGTLAGISFDNHTVAQASIERIDVQI 216
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A ++G+ +R I + + + R+ D DMA E + + Q Q
Sbjct: 217 GNVSTARAELGAYQNRFEHTIKNINVAVENLSASESRIRDTDMAQEMVQFTRAQILSQAG 276
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 277 TAMLAQANQIPQGVLSLLR 295
>gi|77359730|ref|YP_339305.1| flagellin [Pseudoalteromonas haloplanktis TAC125]
gi|76874641|emb|CAI85862.1| flagellin [Pseudoalteromonas haloplanktis TAC125]
Length = 273
Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 91/264 (34%), Gaps = 3/264 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN S+++A + L L +R++SG+R++ A D+AA I+ + S L+
Sbjct: 3 LTVNTNVSSLNAQRNLSKSGQGLATSMERLASGMRINSAKDDAAGLQISNRLTSQINGLA 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S A+ ++++ +++ ++ D S+Q E+T L+++
Sbjct: 63 VAQRNANDGISMAQTAEGALNESTNILQRMRELSLQSANGSNSADDRTSLQKEVTALKAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I+ +SF G+ L G+ + + T +D T
Sbjct: 123 LTRISTTTSFGGQKLLDGTYGTKQFQVGANANEVIDLTLGNFNAATIGVSGVDVSTAGGS 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + + + + V ++ + + + A
Sbjct: 183 QTAIASIDDAIKTIDDQRADLGAVQNRFGHTISNLANIQENVSASRSRIQDTDFATETAQ 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTT 262
+ + + + +
Sbjct: 243 MTKNQILQQAGTSILSQANQIPQA 266
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 46/134 (34%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
T T E+ T + + + ++ ID IK
Sbjct: 140 GTYGTKQFQVGANANEVIDLTLGNFNAATIGVSGVDVSTAGGSQTAIASIDDAIKTIDDQ 199
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+G++ +R + +++ V R+ D D A+E+ +++ Q QQ LS
Sbjct: 200 RADLGAVQNRFGHTISNLANIQENVSASRSRIQDTDFATETAQMTKNQILQQAGTSILSQ 259
Query: 439 VNNSTARILSLFRG 452
N +SL G
Sbjct: 260 ANQIPQAAISLLGG 273
>gi|224437792|ref|ZP_03658739.1| flagellin B [Helicobacter cinaedi CCUG 18818]
gi|313144238|ref|ZP_07806431.1| flagellin B [Helicobacter cinaedi CCUG 18818]
gi|194400778|gb|ACF70595.1| flagellin [Helicobacter callitrichis]
gi|313129269|gb|EFR46886.1| flagellin B [Helicobacter cinaedi CCUG 18818]
Length = 514
Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats.
Identities = 63/510 (12%), Positives = 133/510 (26%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQI----------- 52
I TN SA++A N +L +++SSGLR++ AAD+A+ +IA
Sbjct: 5 INTNISALTAHTIGVQNNRSLHSSLEKLSSGLRLNKAADDASGMAIADSLRSQSESLGQA 64
Query: 53 -----------------MKSDNGALSAVSDAIGLGSSKVDIAKAG----------MSKAI 85
M L + + + + +
Sbjct: 65 VRNANDAIGMIQVADKAMDEQLKILDTIKTKAIQAAQDGQSTETRKALQSDIIRLLEELD 124
Query: 86 DVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
++ +T + +K Q + I SS + + +
Sbjct: 125 NIANTTSYNGQQMLSGAFSNKEFQIGAYSNTTVKASIGPTSSDKIGHVRMESSSFAGEGM 184
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
S + + + K + + + ETV + +S N
Sbjct: 185 LASGAANNLSEVMLKFRQVDGKHDFELETVKISTSAGTGIGVLTEVINKHADTLGVRAAW 244
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
++ D T + + D + + T T
Sbjct: 245 NVMATGDVPVLSGTVRGLVINGVTIGNVNDVRKNDSDGRLLNAINSIKERTGCEAYTDIT 304
Query: 266 SGSKSPSVAASATYIRMGNSDIWVR------------------------ATTKNSITSDP 301
S+ A I+ V ++
Sbjct: 305 GRINVRSLDGRAISIQTEGDSGKVFGGGNFAGISGTDHAIVGRLTLIRTDARDIIVSGIN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G + Y + S + ++ + ++ N+
Sbjct: 365 FSHIGFHSAQGISEYTANLRSVRGEMDANIASACGANANVAQANLHFDGIGAGVTSLKGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ ++ IGS ++ + + + + V+ ++ D D ASES
Sbjct: 425 MVVMDMAESARIQLDKLRADIGSAQIQLVSTINNVSVTQVNVKAAESQIRDVDFASESAT 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKHNVLAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|124502416|gb|ABN13608.1| flagellin [Bacillus subtilis]
Length = 317
Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats.
Identities = 48/300 (16%), Positives = 105/300 (35%), Gaps = 3/300 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ S++L + + +++SSGLR++ A D+AA +I++ M+S L
Sbjct: 3 INHNIAALNTSRQLNAGSDSAAKNMEKLSSGLRINRAGDDAAGLAISEKMRSQIRGLDMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + ++ +++ ++ + T +D +Q E+ QL S++
Sbjct: 63 SKNAQDGISLIQTSEGALNETHSILQRMSELATQAANDTNTDSDRSELQKEMDQLASEVT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L + T I + + N + + ++
Sbjct: 123 RISTDTEFNTKKLLDGTAQNLTFQIGANEGQTMSLSINKMDSESLKVGTTYTVSGDQNTL 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T +P D V + + K + KAA++
Sbjct: 183 TATDGSTATWADADDATNKPAGYYDAGGKVIASEKLAADSKVTKGIDISSSAKAASSALT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
K A A + + + + + T D+ + + ++
Sbjct: 243 TIKTAIDTVSSERAKLGAVQNRLEHTINNLGTSSENLTSAESRIRDVDMASEMMEYTKNN 302
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 28/253 (11%), Positives = 65/253 (25%)
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
+ + + S+ ++T+ T + A + I
Sbjct: 65 NAQDGISLIQTSEGALNETHSILQRMSELATQAANDTNTDSDRSELQKEMDQLASEVTRI 124
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
+ + + T N + T T
Sbjct: 125 STDTEFNTKKLLDGTAQNLTFQIGANEGQTMSLSINKMDSESLKVGTTYTVSGDQNTLTA 184
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ ++T + + + D + A ++ I
Sbjct: 185 TDGSTATWADADDATNKPAGYYDAGGKVIASEKLAADSKVTKGIDISSSAKAASSALTTI 244
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
T I ++ K+G++ +R+ + + + + R+ D DMASE +
Sbjct: 245 KTAIDTVSSERAKLGAVQNRLEHTINNLGTSSENLTSAESRIRDVDMASEMMEYTKNNIL 304
Query: 429 QQLAVQALSIVNN 441
Q + L+ N
Sbjct: 305 TQASQAMLAQANQ 317
>gi|328473443|gb|EGF44291.1| flagellin [Vibrio parahaemolyticus 10329]
Length = 374
Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 69/194 (35%), Gaps = 3/194 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN +AM + L Q +SSG R++ A+D+AA I+ + +
Sbjct: 1 MVSLNTNVAAMMTQRHLSQAAAQNVESQRNLSSGYRINSASDDAAGLQISNTLHVQTRGI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
S A+ + ++ D++ +++ D S+Q E+ LQ
Sbjct: 61 DVALRNAHDAYSVAQTAEGALHESSDILQRLRSLGLQAANGSHEQDDRTSLQQEVIALQD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L +A ++F +N GS + I + + N + I + L
Sbjct: 121 ELDRVAITTTFADKNLFNGSYGSQSFHIGANANSISLTLRNMRTHIPEMGGQHYLGDSLD 180
Query: 178 DSSTDGTERYGLLD 191
+
Sbjct: 181 KDWRVTRDNQQFAF 194
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/371 (10%), Positives = 87/371 (23%)
Query: 80 GMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
++ + M T ++ A + +++ S + S R
Sbjct: 3 SLNTNVAAMMTQRHLSQAAAQNVESQRNLSSGYRINSASDDAAGLQISNTLHVQTRGIDV 62
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + + + S +
Sbjct: 63 ALRNAHDAYSVAQTAEGALHESSDILQRLRSLGLQAANGSHEQDDRTSLQQEVIALQDEL 122
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+V + + + + + L +
Sbjct: 123 DRVAITTTFADKNLFNGSYGSQSFHIGANANSISLTLRNMRTHIPEMGGQHYLGDSLDKD 182
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + + + + V + T + A V H
Sbjct: 183 WRVTRDNQQFAFEYQDNEGQAQSKVLTLKVSDNLEEVATYINAQQSVVDASVTQDHQLQF 242
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
ST K + + + + + + +D IK +
Sbjct: 243 FTSTLNAPEGITWKGNFADEMDIGSGELVTVDDLDMSTVGGAQLAIGVVDAAIKYVDSHR 302
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+IG +R+ D + + +V + GR+ D D A EST + Q Q L+
Sbjct: 303 SEIGGFQNRVSGTIDNLNTINRSVSESKGRIRDTDFARESTVMVRSQVLQDATTALLAQA 362
Query: 440 NNSTARILSLF 450
+ L L
Sbjct: 363 KQRPSSALGLL 373
>gi|5668937|gb|AAD46086.1|AF077341_1 flagellin [Clostridium difficile]
Length = 291
Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 74/203 (36%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN SA+ A+ ++ +++SSG+R+ AAD+AA +I++ M++ L
Sbjct: 3 VNTNVSALIANNQMGRNVNAQSKSMEKLSSGVRIKRAADDAAGLAISEKMRAQIKGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ G S V A+ + + +++ ++ + + I E+ QL+ ++
Sbjct: 63 GRNVQDGISVVQTAEGALEETGNILQRMRTLSVQSSNETNTAEERQKIADELLQLKDEVE 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ FNG+ L + + + N +I +
Sbjct: 123 RISSSIEFNGKKLLDGSSTEIRLQVGANFGTNVAGTSNNNNEIKVALVNTSSIMSKAGIT 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
+ + + V
Sbjct: 183 SSTIASLNADGTSGTNAAKQMVS 205
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 54/137 (39%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T+ + + + + +T + N D + A ++MVS +D +K
Sbjct: 153 TNVAGTSNNNNEIKVALVNTSSIMSKAGITSSTIASLNADGTSGTNAAKQMVSSLDVALK 212
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ K+G+ +R+ ++ + + V R+ D D+ASE LS + Q +
Sbjct: 213 ELNTSRAKLGAQQNRLESTQNNLNNTIENVTAAESRIRDTDVASEMVNLSKMNILVQASQ 272
Query: 434 QALSIVNNSTARILSLF 450
L+ N +L L
Sbjct: 273 SMLAQANQQPQGVLQLL 289
>gi|2829686|sp|P80583|FLA_CLOTY RecName: Full=Flagellin
gi|5019447|emb|CAB44444.1| flagellin [Clostridium tyrobutyricum]
Length = 377
Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats.
Identities = 45/273 (16%), Positives = 85/273 (31%), Gaps = 3/273 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A +A + + + N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLMANNALRNMNVNSNNASKAMEKLSSGLRINRAGDDAAGLAISEKMRGQINGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ TD +IQ E+ QL ++
Sbjct: 63 SSNAQDSISLIQTAEGALNETHSILQRMRTLAVQSSNDTNTTTDRSAIQDEVNQLTDEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + L + N + +
Sbjct: 123 RIANTTEFNTQKLLDGSKVGLVDAKDADASVQLNTSANISLASNFSTTSATGIADSFTVT 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T V + +S T TK L + N T
Sbjct: 183 ITRTHGTAGATFASTDYDVALVGGTELIEHSSSSLTYDTKAINLVGMIKCFSIRTNDTIR 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + T+ A S +
Sbjct: 243 KVSHVRTVKALSMQIGAIVTNMLIGINSMKATD 275
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/341 (12%), Positives = 93/341 (27%)
Query: 104 DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
+ + + ++R G + N + TA A + S ++
Sbjct: 37 NRAGDDAAGLAISEKMRGQINGLNQASSNAQDSISLIQTAEGALNETHSILQRMRTLAVQ 96
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
++ D + + + N ++L V + DA ++ +
Sbjct: 97 SSNDTNTTTDRSAIQDEVNQLTDEIDRIANTTEFNTQKLLDGSKVGLVDAKDADASVQLN 156
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
+ + + T+ + A S +
Sbjct: 157 TSANISLASNFSTTSATGIADSFTVTITRTHGTAGATFASTDYDVALVGGTELIEHSSSS 216
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ I TN T+ KV + ++ I+S +
Sbjct: 217 LTYDTKAINLVGMIKCFSIRTNDTIRKVSHVRTVKALSMQIGAIVTNMLIGINSMKATDI 276
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
+ ++ I+ I+ + K+G+ +R+ + + + +
Sbjct: 277 GVRNTSGKALDISTASKATGAITQINNAIETVSTQRSKLGAYQNRLEHTINNLGTSSENL 336
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
R+ D DMASE + S Q A L+ N T
Sbjct: 337 TSAESRIRDVDMASEMSEYSKNNILSQTAQAMLAQANQQTQ 377
>gi|257456318|ref|ZP_05621515.1| flagellar filament 34.5 kDa core protein [Treponema vincentii ATCC
35580]
gi|257446404|gb|EEV21450.1| flagellar filament 34.5 kDa core protein [Treponema vincentii ATCC
35580]
Length = 286
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 43/201 (21%), Positives = 81/201 (40%), Gaps = 3/201 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N SAM A + L + + +++SSGLR++ A D+A+ ++++ M++ L+
Sbjct: 2 VINHNMSAMFAQRTLGVTDVRIGKDIEKLSSGLRINRAGDDASGLAVSEKMRAQIRGLNQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
S G S + +A+A + + D+M I+ D IQ E++QL +++
Sbjct: 62 ASANASNGISFIQVAEAYLQETTDIMQRIRELAVQASNGIYSAEDRMQIQVEVSQLVAEV 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FNG N L A + F N +I + + +
Sbjct: 122 DRIASSAQFNGMNMLTGRFAREGGENAVTGSMWFHIGANMDQRIRVYIGTMTAHALGVRD 181
Query: 180 STDGTERYGLLDRNHKIKVEP 200
+D + +
Sbjct: 182 LSDNRTMTIETAEDANHSIGT 202
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 42/115 (36%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + T + ID +K +G+ +R+ + I
Sbjct: 172 MTAHALGVRDLSDNRTMTIETAEDANHSIGTIDEALKKINKQRADLGAYQNRLEMAVVGI 231
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + ++ R+ DADMA + + Q Q L+ N++T +LSL R
Sbjct: 232 DIAAENMQASESRIRDADMAKQMVEYTRNQILNQSGTAMLAQANSNTQLVLSLLR 286
>gi|56965461|ref|YP_177193.1| flagellin protein [Bacillus clausii KSM-K16]
gi|56911705|dbj|BAD66232.1| flagellin protein [Bacillus clausii KSM-K16]
Length = 302
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 11/186 (5%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM+A ++L Q+++SSGLR++ A D+AA SI++ M++ L
Sbjct: 3 INNNLSAMNAHRQLGINQGAASKAQEKLSSGLRINRAGDDAAGLSISEKMRAQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK----SIQSEITQLQSQL 119
S G S + A+ + + ++ ++ + GT+ +IQ EI L+ ++
Sbjct: 63 SRNAQDGISLIQTAEGALDETHSILQRMRELVVQAGNTGTNQDEDLQAIQDEINSLKEEI 122
Query: 120 -------RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
+ I+ ++FNG++ L+ + AS S + + I D
Sbjct: 123 GGMTDGSKGISDRTAFNGKDLLKGATDDAGASAPASFTFQIGANQGQTITIEIGDMSATA 182
Query: 173 ETVLLD 178
D
Sbjct: 183 LGTEGD 188
Score = 113 bits (281), Expect = 8e-23, Method: Composition-based stats.
Identities = 16/137 (11%), Positives = 42/137 (30%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ D ++ ++ + ++ ++ IK
Sbjct: 165 ANQGQTITIEIGDMSATALGTEGDDGLKISDIDVTKFADPDATDEEGFDTQLAAVENAIK 224
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R+ + + ++ R+ D DMA E + Q +
Sbjct: 225 QVSKQRSSLGAAQNRLEHTISNLDNSSENLQAAESRIRDVDMAKEIMEYTKSNILSQASQ 284
Query: 434 QALSIVNNSTARILSLF 450
L+ N + ++L L
Sbjct: 285 SMLAQANQAPQQVLQLL 301
>gi|304398829|ref|ZP_07380699.1| flagellin domain protein [Pantoea sp. aB]
gi|304353533|gb|EFM17910.1| flagellin domain protein [Pantoea sp. aB]
Length = 573
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 72/207 (34%), Gaps = 3/207 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA +S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSMERLSSGLRINSAKDDAAGQAIANRFQSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISAAQTTEGALSEINNNLQRVRELTVQSQNGTNSQSDQDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ ++FNG N L D A I + + + + + +
Sbjct: 124 DRVSGQTTFNGVNVLAKDGTMKIQVGANDGETISIDLKQIDSKTLGLTGFNVNGSGSVAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + + +
Sbjct: 184 TAATKANLVAAQIGAQPTPDANGVSTY 210
Score = 95.6 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 69/201 (34%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ A T+ + + A T +G + + S G + VA
Sbjct: 373 DATSSGAITITNARISADALKSATKTTGFDIGTGNAASHISVDTSGNVTQGNGTAMVAAF 432
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ T +TT + + V + TDA + + + +D
Sbjct: 433 TKDDGSLTTNNTTNLFLQTDGSVTNGSGKAVYVTADAKFTTDAATKSATTADPLKALDAA 492
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I +G+I +R++ + + R+ DAD A+E + +S Q QQ
Sbjct: 493 ISSIDKFRSSLGAIQNRLNSAVTNLNNTTTNLTAAQSRIQDADYATEVSNMSKAQIVQQA 552
Query: 432 AVQALSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 553 GNSVLAKANQVPQQVLSLLQG 573
>gi|16901498|gb|AAL30167.1|AF345850_1 flagellin [Escherichia coli]
Length = 545
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 3/154 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
++ + FNG N L D A
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTIT 157
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 51/139 (36%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ ++ T+ + + + + N+ + ++ +D I
Sbjct: 407 AGDDLTQDAQTVSTYYSQADGTVTNSAGKEIYKDADGVYSTENKTSKTSDPLAALDDAIS 466
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+I +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 467 SIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGN 526
Query: 434 QALSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 527 SVLAKANQVPQQVLSLLQG 545
>gi|45657404|ref|YP_001490.1| flagellin protein [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|45600643|gb|AAS70127.1| flagellin protein [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
Length = 282
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 71/172 (41%), Gaps = 3/172 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ A + L+ + ++ +++SSG+R++ A D+A+ ++++ M++ L
Sbjct: 3 INHNISAIFAHRTLKFNSESMGKDIEKLSSGMRINRAGDDASGLAVSEKMRTQILGLRRA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + + + + +++ I+ D + IQ E++QL ++
Sbjct: 63 EMNTEDGMSLIQTTEGYLQETHEIVQRIRVLAVQAANGIYTEEDRQQIQVEVSQLVDEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
IA + FN L + + +V I T++
Sbjct: 123 RIASQAEFNKMKLLTGAFARLNPTASMWFHIGANMHQRERVYIETMNTAALG 174
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 40/115 (34%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + L + + ++ D ++ + +G+ +R+ +
Sbjct: 168 MNTAALGLRNPTVLTFISLSTAGKANSVIGLADDALRSISKQRADLGAYYNRLEHAAKGL 227
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA + T + Q Q A L+ N +L L +
Sbjct: 228 MNAYENIQAAESRIRDTDMAEQMTSFTRYQILTQAATAMLAQANMKPQTVLQLLK 282
>gi|257092974|ref|YP_003166615.1| flagellin domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045498|gb|ACV34686.1| flagellin domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 598
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 40/206 (19%), Positives = 75/206 (36%), Gaps = 3/206 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++++ + L +L R+SSGLR++ A D+AA +I+ M S L+
Sbjct: 4 VINTNAASLNSQRSLNMSQTSLATSLQRLSSGLRINSAKDDAAGMAISARMTSQINGLNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
S G S A+ G+ + + ++ TD ++Q E+ QL Q+
Sbjct: 64 ASRNANDGISLAQTAEGGLQSITESLQRMRELAVQGANATNTATDRAALQQEVDQLVQQI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A ++FNG L S + + + + ++ +
Sbjct: 124 NTVAGQTAFNGVKLLDGTFNSQAFQVGANAGEKISINSISSARADSLGVGTTSSYSATTA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKD 205
T T + D
Sbjct: 184 GTVSTGVLAAGGITVNGYGIGPSIGD 209
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 73/212 (34%)
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A T + AA S +++ S + + + S
Sbjct: 387 NAINALTSKTGVTAAVDGTTGLITLSTGAGQAISISGSLTNRAATVTATGFSADQMGASA 446
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
TN+ V + + + TL + S Y+ T + + +
Sbjct: 447 TASTNAAVTRGKISLSSSGSAGITLGGSDIALAGLTSAYTAATASFGSGVASVDVSTAAG 506
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ID+ + ++ +G++ +R + + + R++DAD A+E+
Sbjct: 507 AANAIATIDSALANINSSRANLGAVQNRFSSVVSNLATTSENLTASRSRILDADFAAETA 566
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
L+ Q QQ L+ N+ +LSL RG
Sbjct: 567 NLTRAQILQQAGTAMLAQANSLPQNVLSLLRG 598
>gi|126668565|ref|ZP_01739519.1| Flagellin and related hook-associated protein [Marinobacter sp.
ELB17]
gi|126626970|gb|EAZ97613.1| Flagellin and related hook-associated protein [Marinobacter sp.
ELB17]
Length = 402
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 44/450 (9%), Positives = 123/450 (27%), Gaps = 51/450 (11%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I + +L+D++ L +++++G RV+ +D+ + + + +
Sbjct: 1 MIRISSQQIFSGGINRLQDLSAQLNKTDEQIATGKRVNRPSDDPVAAARILKLDQEVKRI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
L ++++ ++ +S ++D++ ++ + S +++ +L+
Sbjct: 61 ETYERNAQLANNRLGQEESAISSSLDILQRVRELTVQAGNGSLSASDRLSISSEMNERLQ 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A+ ++ + G S A + + Q + +
Sbjct: 121 QLAQTANTQDASGEYIFSGFQGGSPAYAKEAGEWTYQGDEGQRMLEIDDGVTVAISDNGK 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
Sbjct: 181 GIFDRIPATASGGLT--------------------------------------------- 195
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+P P + + + + T++
Sbjct: 196 -GPLPLPVPPPDGRINSISVINRSDLQAGGLASLELTISAPNQLQYVDKDGVTQSVAFEP 254
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ T V+ T K + N+++ + +
Sbjct: 255 GEPVTVNGVQFTLTDAVVNDVFTIETGEKQSVFKTIENLISGLDNLSKSGSAGSDAYNDL 314
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ++ +D + ++G + + + F++ ++ +L D D A +
Sbjct: 315 IASSLANLDNAQESFILKQTELGGRMNSVESTQAFLEDSALYSKEIRSQLQDIDYAEAIS 374
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
LS Q A Q+ + V+ LSLF
Sbjct: 375 TLSFQSFVLQAAQQSFARVSQ-----LSLF 399
>gi|306817755|ref|ZP_07451497.1| flagellin [Mobiluncus mulieris ATCC 35239]
gi|304649569|gb|EFM46852.1| flagellin [Mobiluncus mulieris ATCC 35239]
Length = 511
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+S+ TN A+ A + + + + L +++SG R+++ D+AA ++A+ M+S
Sbjct: 233 SSLNTNVMALQAYRNMANAHKILNDSLLKLTSGERINNPGDDAAGLALAENMRSQLLGSK 292
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT--DSKSIQSEITQLQSQL 119
G S V A+ + +++ ++ G +I +E+ ++ ++
Sbjct: 293 QAVRNAQDGISLVQTAEGVLGTVHNMLQRMRVLAVQGASDSNQDQRGNIVTEMDSIRVEI 352
Query: 120 RDIARGSSFNGENW 133
I + G
Sbjct: 353 GRIGEATEVLGRKI 366
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 40/105 (38%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ A + + ID QI+ + A +G++ SR + + + + +
Sbjct: 404 HAQLGEIPQDASHEAFQGAIVNIDGQIEVISTARATLGAVMSRFENTINTLNVTVENLAA 463
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
GR+ D D +ES + Q + +S + +LSL
Sbjct: 464 ARGRIQDTDFTTESAEYMRGRILTQSSHAVMSQALLAPRGVLSLL 508
>gi|114054836|gb|ABI50018.1| FlaA [Clostridium botulinum]
Length = 272
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 2 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 62 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA + FN ++ + + ++
Sbjct: 122 RIASQTQFNTKSLINGAVSEDAKAMT 147
Score = 82.9 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 48/131 (36%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D ++ T + + I + + N + + + ++ ID+ I +
Sbjct: 142 DAKAMTFQIGANSGQTIKLTIGSMDAKTLKVDNIKLDDTAANITKQIATIDSAINSVSKE 201
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 202 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 261
Query: 439 VNNSTARILSL 449
N + +L L
Sbjct: 262 ANQAPQGVLQL 272
>gi|239905666|ref|YP_002952405.1| flagellin [Desulfovibrio magneticus RS-1]
gi|239795530|dbj|BAH74519.1| flagellin [Desulfovibrio magneticus RS-1]
Length = 698
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 41/273 (15%), Positives = 85/273 (31%), Gaps = 4/273 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N AM++++ L D L R+SSGLR++ AAD+AA ++ ++M+SD ++
Sbjct: 3 LVINHNLMAMNSARNLSDHYGALSTSTQRLSSGLRINSAADDAAGLAVRELMRSDISTMN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K I SE + +
Sbjct: 63 QGIRNANDAISMIQTADGALQVVDEKLIRMKELAEQAATGTYTEDQRAIINSEFQAMALE 122
Query: 119 LRDIARGSSFNGENWLRTD-LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ I+ + FNG L + G S S S + ++ L
Sbjct: 123 VQRISNATDFNGIPLLNGNLSGISNTSSLSSSGSLIVHFGTSNNSAEDYYSVSIDDSRLP 182
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
++ +L + + K ++ S + W
Sbjct: 183 SLFSNANLVGSVLPDSIPMYEPEGSSKQVNTFTTGDQEYPSLTSIEGGNFLSVWQSQNQG 242
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
+ + + + ++
Sbjct: 243 GAGWSIHGQIMDTNGNKVGSEFQVNTYNISDQT 275
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/371 (10%), Positives = 88/371 (23%)
Query: 82 SKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSS 141
+ + + R S + + + I N +
Sbjct: 328 DQQTSIQYVGNPLVALDDNRFAAVWSSDLQGGAGSNTIFRIFDNEGNPLTNESIVSDYPN 387
Query: 142 TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
++I S+ + + D + +
Sbjct: 388 GSNIIPSITKLTNGNTIVTYSGGGGGGPDPSSYGIYSQEYDTSGAKVGNNILVNDYTTNV 447
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
S+ D ++ F + A D + V
Sbjct: 448 QNWSSVQSLSDGKYVVAWSSFDQESPGSWGTYAKIYNQDGTVYKSEFKVNDATINDQHMP 507
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
+ + V+ ++ + T GN T
Sbjct: 508 VIADLKNGAFIVSYNSGGFDGKIGWAMGAQIFGYNGTKLGNEFMVNSELAGNQSNPAITA 567
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ S + +++ + + +E + I + +
Sbjct: 568 LDDGSFAIAYNNDAGEDPSGIGISVRIYQPFLDIRTQTRAQEHLEKISSALIKKDKIRAN 627
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G+ +R+ I++ + ++ ++ D D+A E T Q Q AV LS N+
Sbjct: 628 LGATQNRLENTVSNIQIQAENLQAAESQISDTDVADEMTNFVKEQILSQAAVAMLSQANS 687
Query: 442 STARILSLFRG 452
L L G
Sbjct: 688 LPKMALQLIEG 698
>gi|148378244|ref|YP_001252785.1| flagellin protein [Clostridium botulinum A str. ATCC 3502]
gi|153934071|ref|YP_001382645.1| flagellin protein [Clostridium botulinum A str. ATCC 19397]
gi|153937683|ref|YP_001386197.1| flagellin protein [Clostridium botulinum A str. Hall]
gi|148287728|emb|CAL81794.1| flagellin [Clostridium botulinum A str. ATCC 3502]
gi|152930115|gb|ABS35615.1| flagellin protein [Clostridium botulinum A str. ATCC 19397]
gi|152933597|gb|ABS39096.1| flagellin protein [Clostridium botulinum A str. Hall]
Length = 283
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 77/204 (37%), Gaps = 3/204 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM A + + +R++SG+R++ A+D+ A +I++ M++ L
Sbjct: 3 INHNVNAMIAYRNIMINGALAGKAMERLASGMRINRASDDPAGLAISEKMRAQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + G S + +A+ G+ + ++ ++ D K+IQ EI QL +
Sbjct: 63 SRNVQDGISMIQVAEGGVKEIQSMLQRMRELAVQAANGTNSPEDRKNIQDEINQLTRGID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
DIA G+ FN L + + + + + ++ T
Sbjct: 123 DIANGTEFNTIKILNANAADAGEVKLQIGANEGQFFGIKLQNMNSAALGINGNTDKDGVD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLK 204
+E+ + +
Sbjct: 183 VSTSEKASAAIKVFDDAINKTSSF 206
Score = 84.4 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 43/117 (36%)
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + +N + + + D I ++ +G+ S+ + + +
Sbjct: 163 QNMNSAALGINGNTDKDGVDVSTSEKASAAIKVFDDAINKTSSFMSSLGASSNMLEHRIN 222
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+++ + + R+ DADMA E + QQ+A S V + L +
Sbjct: 223 YLENTIGNLTEAESRIRDADMAKEMMNYTKYSVLQQVAQAIFSQVLKQQESTIQLLK 279
>gi|206970879|ref|ZP_03231831.1| A-type flagellin [Bacillus cereus AH1134]
gi|206734515|gb|EDZ51685.1| A-type flagellin [Bacillus cereus AH1134]
Length = 364
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + M+ +++ +++ + ++ E L+ Q+
Sbjct: 63 ANNTQDGISLIRTADSAMNSVSNILLRMRDLANQSANGTNTNENQAALNKEFDALKEQID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
I+ + FN + L +
Sbjct: 123 YISTNTEFNDKKLLDGSNKTIAVQT 147
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 40/88 (45%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ IDT +K + +G+ +R+ + +K ++ ++ DADMA E + ++
Sbjct: 277 AIASIDTALKNIASNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMT 336
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + LS N + + L +
Sbjct: 337 KFKILNEAGISMLSQANQTPQMVSKLLQ 364
>gi|6009843|dbj|BAA85086.1| flagellin [Escherichia coli]
Length = 568
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 80/273 (29%), Gaps = 3/273 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ S + +S A A
Sbjct: 184 KAATVSDLTAAGATGTGPYAVTTNNTALSASDALSRLKTGDTVTTTGSSAAIYTYDAAKG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ + +GT+ S +
Sbjct: 244 NFTTQATVADGDVVNFANTLKPAAGTTASGVYT 276
Score = 99.8 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 39/317 (12%), Positives = 95/317 (29%)
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
D + + + +D + +
Sbjct: 252 ADGDVVNFANTLKPAAGTTASGVYTRSTGDVKFDVDANGDVTIGGKAAYLDATGNLSTNN 311
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + T + + T + + T+ + T+ + +A
Sbjct: 312 AGIASSAKLSDLFASGSTLATTGSIQLSGTTYNFGAAATSGVTYTKTVSADTVLSTVQSA 371
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A +G + + + ++ N++ + + T ++ N
Sbjct: 372 ATANTAVTGATIKYNTGIQSATASFGGVNTNGAGNSNDTYTDADKELTTTASYTINYNVD 431
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
T + + K + + +N T T+ + A ++ ++ +D I
Sbjct: 432 KDTGTVTVASNGAGATGKFAATVGAQAYVNSTGKLTTETTSAGTATKDPLAALDEAISSI 491
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G+I +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 492 DKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 551
Query: 436 LSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 552 LAKANQVPQQVLSLLQG 568
>gi|262344292|gb|ACY56029.1| flagellin B [Helicobacter hepaticus]
Length = 514
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 41/176 (23%), Positives = 76/176 (43%), Gaps = 3/176 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN SA++A N +L +++SSGLR++ AAD+A+ +IA ++S + +L
Sbjct: 5 INTNISALTAHTIGVQNNRSLHNSLEKLSSGLRLNKAADDASGMAIADSLRSQSESLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ +A M + + ++ TIK K + K++QS+I +L +L
Sbjct: 65 VRNANDAIGMIQVADKAMDEQLKILDTIKTKAIQAAQDGQSNETRKALQSDIIRLLEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+IA +S+NG+ L + I + L+ +
Sbjct: 125 NIANTTSYNGQQMLSGAFSNKEFQIGAYSNTTVKASIGPTSSDKIGHVRLESGSFG 180
>gi|10281485|gb|AAG15515.1|AF095237_1 flagellin subunit FliC [Clostridium difficile]
Length = 290
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 32/208 (15%), Positives = 75/208 (36%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN SA+ A+ ++ +++SSG+R+ AAD+AA +I++ M++ L
Sbjct: 3 VNTNVSALVANNQMGRNVNAQSKSMEKLSSGVRIKRAADDAAGLAISEKMRAQIKGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ G S V A+ + + +++ ++ + + + E+ QL+ ++
Sbjct: 63 GRNVQDGISVVQTAEGALEETGNILQRMRTLSLQSSNETNTAEERQKVADELLQLKDEVE 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ FNG+ L + + + N +I +
Sbjct: 123 RISSSIEFNGKKLLDGSSTEIRLQVGANFGTNVAGTTNNNNEIKVALVNTSSIMSKAGIT 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + V
Sbjct: 183 SSTIASLNVDGASGTDAAKQMVSSLDMA 210
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 54/137 (39%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T+ T + + + +T + N D + A ++MVS +D +K
Sbjct: 153 TNVAGTTNNNNEIKVALVNTSSIMSKAGITSSTIASLNVDGASGTDAAKQMVSSLDMALK 212
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ K+G+ +R+ ++ + + V R+ D D+ASE LS + Q +
Sbjct: 213 ELNTSRAKLGAQQNRLESTQNNLNNTIENVTAAESRIRDTDVASEMVNLSKMNILVQASQ 272
Query: 434 QALSIVNNSTARILSLF 450
L+ N +L L
Sbjct: 273 SMLAQANQQPQGVLQLL 289
>gi|170791537|gb|ACB38410.1| flagellin A [Aeromonas hydrophila subsp. ranae]
Length = 303
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 77/203 (37%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + N +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNLMNTNKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E +QL +++
Sbjct: 65 NRNANDGISVAQTAEGAMDEITSMLQRMRTLAQQSANGSNNTDDRTALQQEYSQLMTEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A+ ++F G+N L+ S A + R TV ++
Sbjct: 125 RVAKDTTFGGQNLLKGGYVGSFQVGADAGQTITFRMTTAFSISGMASATSGSATVTTTTT 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
+ +
Sbjct: 185 GEPYTITKTAGTPVSSTSMSTIT 207
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 68/239 (28%)
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + T GA + + S +
Sbjct: 65 NRNANDGISVAQTAEGAMDEITSMLQRMRTLAQQSANGSNNTDDRTALQQEYSQLMTEID 124
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ G + + + +D G T + + + + ++ +
Sbjct: 125 RVAKDTTFGGQNLLKGGYVGSFQVGADAGQTITFRMTTAFSISGMASATSGSATVTTTTT 184
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + + ++ +D IK + ++G++ +R
Sbjct: 185 GEPYTITKTAGTPVSSTSMSTITAASSAQSAMANLDYMIKVVDSKRAELGAVQNRFDSTI 244
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + V R+ DAD A+E+ L+ QQ A LS N LSL +G
Sbjct: 245 RNQANVSENVSAARSRIRDADFATETANLTKQNILQQAASTILSQANQRPQSALSLLQG 303
>gi|47565429|ref|ZP_00236470.1| flagellin [Bacillus cereus G9241]
gi|47557419|gb|EAL15746.1| flagellin [Bacillus cereus G9241]
Length = 278
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG R++ AAD+AA +IA M++ L
Sbjct: 3 INTNINSMRTQEYMRQNQEKMNTSMNRLSSGKRINSAADDAAGLAIATRMRAKENGLGVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A + ++ +++ +++ D K+ Q E QL SQ+
Sbjct: 63 SRNTQDGISLIRTADSALNSVSNILLRMRDLAVQSANGTNSEDDRKATQKEFGQLISQID 122
Query: 121 DIARGSSFNGENWLRTDLG 139
IA+ ++FNG N L
Sbjct: 123 YIAKNTAFNGTNLLDGSAS 141
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 38/94 (40%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ V+ ID IK + +G+ +R+ + ++ ++ DADMA
Sbjct: 185 DTTAKAAVTSIDDMIKSIATSRADLGATLNRLDFNVANLNSQASSMASSASQIEDADMAK 244
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + ++ + + + LS N + + L +
Sbjct: 245 EMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 278
>gi|321313083|ref|YP_004205370.1| flagellin [Bacillus subtilis BSn5]
gi|320019357|gb|ADV94343.1| flagellin [Bacillus subtilis BSn5]
Length = 284
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 40/96 (41%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
++ A + + IDT I + K+G++ +R+ + + + + R+ D DM
Sbjct: 189 DDATAFDTQLGLIDTAINNVSTQRSKLGAVQNRLEHTINNLSASGENLTAAESRIRDVDM 248
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A E + + Q + L+ N +L L R
Sbjct: 249 AKEMSEFTKNNILSQASQAMLAQANQQPQNVLQLLR 284
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 75/192 (39%), Gaps = 13/192 (6%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ +L N + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTLNRLSSNNGASQKNMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS----KSIQSEITQLQSQL 119
S G S + A+ +++ ++ ++ GT +IQ EI L ++
Sbjct: 63 SKNSQDGISLIQTAEGALTETHSILQRVRELAVQANNTGTQDGTDLGAIQEEIKSLLEEV 122
Query: 120 -------RDIARGSSFNGENWLRTDLGSS--TASIAKSVIGSFIRDDNGKVQITTIDYYL 170
+ I+ + FNG+ L D + T I + + +
Sbjct: 123 GGMTGGSKGISDRTEFNGKKLLNGDFATDKLTFQIGANAGQQLAVNIGDMSATGLGVAGI 182
Query: 171 DPETVLLDSSTD 182
D D++
Sbjct: 183 DVTAFKDDATAF 194
>gi|302343783|ref|YP_003808312.1| flagellin domain protein [Desulfarculus baarsii DSM 2075]
gi|301640396|gb|ADK85718.1| flagellin domain protein [Desulfarculus baarsii DSM 2075]
Length = 568
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 56/358 (15%), Positives = 108/358 (30%), Gaps = 4/358 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A +A++ L ++ +L R+SSGLR++ AAD+AA ++ ++M++D AL+
Sbjct: 5 INHNMMASNAARNLSNVYGDLATSVQRLSSGLRINSAADDAAGLAVREMMRADIAALNQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+ MS + + +K + SE + +++
Sbjct: 65 VRNASDAISMIQTAEGAMSVIDEKLIRMKELAEQAATGTYTTAQRLIMDSEYQAMAAEID 124
Query: 121 DIARGSSFNGENWLRTD-LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FNG L L S K G+ ++ D T L
Sbjct: 125 RIASATDFNGIKLLDGSLLTQHDGSGLKVHFGTGNESAEDYYYVSIADMKATSITGLQVG 184
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ N D + + + +
Sbjct: 185 GGASGAEASVFRTNSLDMASTSDTLDHYGAFGIQLSNDGADWGRYGYVNYGPGDTLDDIV 244
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + G S S G + I + + + +
Sbjct: 245 NNINRGNAGGNLVDFSTCTTTELDGESVFVSGFEYRFNNSTLPGLTAISLTTLSIGTQGA 304
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
N + S+ L + D + S + + A T +Y+
Sbjct: 305 SLASVAQWFQCAVNYNASASPGSSKLVAVYDSAEPQSVILSATSFGLDAMAITSSYST 362
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 57/433 (13%), Positives = 120/433 (27%), Gaps = 26/433 (6%)
Query: 33 SGLRV-----SDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
SGL+V +++A++ Y SIA + + L A G +S M+ D
Sbjct: 149 SGLKVHFGTGNESAEDYYYVSIADMKATSITGLQVGGGASGAEASVFRTNSLDMASTSDT 208
Query: 88 MSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSS--------FNGENWLRTDLG 139
+ G D L DI + + T+L
Sbjct: 209 LDHYGAFGIQLSNDGADWGRYGYVNYGPGDTLDDIVNNINRGNAGGNLVDFSTCTTTELD 268
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ ++ G I+ + + L S + + +
Sbjct: 269 GESVFVSGFEYRFNNSTLPGLTAISLTTLSIGTQGASLASVAQWFQCAVNYNASASPGSS 328
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
V + ++ + ++ + G V A +
Sbjct: 329 KLVAVYDSAEPQSVILSATSFGLDAMAITSSYSTLVFMSPTFTGGGQNNAVSAEAVQDSD 388
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + T ++ + + T + + T+ Y D
Sbjct: 389 GSGWELQITATNGQYMRLTMPDGQAFELNASSEGGDPSGDSVDPTVALRIDLSGTYVYAD 448
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + + + + A + + ID I A
Sbjct: 449 SRLDQTNEWFSQGAGVSWDGAN-------------ILTQSAAQAALGQIDAAINRKDTAR 495
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G+ +R+ +++ + ++ R+ D D+A E T + Q AV L+
Sbjct: 496 ANLGATQNRLENTITNLQIQAENLQAAESRISDVDVALEMTEFTRNNILTQAAVSMLAQA 555
Query: 440 NNSTARILSLFRG 452
N+ LSL G
Sbjct: 556 NSLPNLALSLLGG 568
>gi|307945679|ref|ZP_07661015.1| flagellin [Roseibium sp. TrichSKD4]
gi|307771552|gb|EFO30777.1| flagellin [Roseibium sp. TrichSKD4]
Length = 501
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 72/501 (14%), Positives = 151/501 (30%), Gaps = 51/501 (10%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ + L++ Q+R+S+GL+V+ A DN + A + + G L
Sbjct: 1 MSDIVLTSAVRENLLALKNTADLQSRTQNRLSTGLKVNSALDNPNSFFTAAGLNARAGDL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQ 118
++ D +G + A G+ ++ + K + + K+ + + Q
Sbjct: 61 GSLLDNMGQAVQTIRAANDGIEAISKLVESAKAIANQALQTQSEFERKTFTQQFNDVLVQ 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRD---------------------- 156
+ D+A+ S + G+N L + + +
Sbjct: 121 IEDLAKDSGYKGKNLLAGLGNELEVIFNEDSTSTLTVNPVDYTDTSLETGLNLADLENGG 180
Query: 157 ---------------------------DNGKVQITTIDYYLDPETVLLDSSTDGTERYGL 189
D + D T +
Sbjct: 181 TGTSSFTLQGGSVELDLATLQASSNLTDLAAWSTGDVVTIGDGTTSKTLTVGTDITTVQD 240
Query: 190 LDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIP 249
D + + T A A
Sbjct: 241 YIDAISGLGGLHATFDEGTDKITVTSALDTGVTLSVAKDNAGGGTATDGGIGTGTATLTT 300
Query: 250 VPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
L A + G + D ++ + N+T +
Sbjct: 301 TALTANATLITSAGFQIGDTLTITDGNGFEPASLEIDEDTTVDDLVTLIDNVKGLNATFS 360
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ + + D+R + + + + A+ + + +E + ++
Sbjct: 361 GGSISLIGEVSFTINSDNRDFNQGGLIATDPVPKSPASLLADASEFQKDTDIERTLQAVN 420
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ ++A +G+ S + ++ DF + + + +E G G L ADM E + ALQT+Q
Sbjct: 421 AALDELRSSATSLGASLSTVEIRTDFTEELINTLEVGAGALTIADMNEEGANMLALQTRQ 480
Query: 430 QLAVQALSIVNNSTARILSLF 450
QL+ ALS+ N + +L+LF
Sbjct: 481 QLSSTALSLANQAEQSVLNLF 501
>gi|300854149|ref|YP_003779133.1| flagellin protein [Clostridium ljungdahlii DSM 13528]
gi|300434264|gb|ADK14031.1| flagellin protein [Clostridium ljungdahlii DSM 13528]
Length = 570
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 47/334 (14%), Positives = 103/334 (30%), Gaps = 3/334 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A +A + + + N ++SSGLR++ AAD+AA +I++ M+ L
Sbjct: 3 INHNLQANNAIRNMNINSNNASKSMQKLSSGLRINSAADDAAGLAISEKMRGQINGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ S V A+ +++ ++ ++ D +SIQ+E+ QL S++
Sbjct: 63 ASNSQDAISMVQTAEGALNETTSILQRMRQLANQSANGTNVTVDRQSIQTEMNQLTSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN ++ L+ D A + + T +
Sbjct: 123 RIGNTTEFNTQSLLKGDGSVKVAGSGLTTGVGNFTGGVDPSKTAATQTNTITATATAADT 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T L +V + T++ + + ++ A
Sbjct: 183 YTVTLNGQALTVTFAASNAGGQAAQAVYNVTGTAATVNLESTATVNGAATGIRTALQDMI 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ A T+ + G+ + + G + A + ++
Sbjct: 243 DNNSALKGNYTVTGNGANVTITAVSGGTFDGAAGIIGASAKSGTTLAGTAAGNTGTTSTG 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + Y + +
Sbjct: 303 TAAAATITIGGTYSAYIGTGMTIDNQQVEFYDGT 336
Score = 77.9 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/334 (8%), Positives = 70/334 (20%), Gaps = 4/334 (1%)
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
T + + T LQ + + + ++ + S + I
Sbjct: 218 TVNLESTATVNGAATGIRTALQDMIDNNSALKGNYTVTGNGANVTITAVSGGTFDGAAGI 277
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
+ K T + + I +
Sbjct: 278 IGASAKSGTTLAGTAAGNTGTTSTGTAAAATITIGGTYSAYIGTGMTIDNQQVEFYDGTK 337
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
G + + + + G V L A T +
Sbjct: 338 GAYTGSAIGVDLAGLSTADDISKAIIAQAGPKLSGVTLATGGGAGKVTISAADPGVAGNQ 397
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + N + + + K
Sbjct: 398 IKVQDGSIQQNFKTTMQVGANMGQTFEISIADMRSNALGIAGTAGASVAGVAGAKFTSTN 457
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + TL + + +D +A ++G+ +R+
Sbjct: 458 VVTDGTSATLREASLD----VSTTDTATAALKVLDNATAAVSAQRSQLGAYQNRLEHTIA 513
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
+ + + R+ D DMA E + S
Sbjct: 514 NLGTSSENLTSAESRIRDVDMAKEMSAFSKNNIL 547
>gi|167470708|ref|ZP_02335412.1| flagellin [Yersinia pestis FV-1]
Length = 251
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 35/91 (38%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + +D IK +G++ +R + + R+ DAD A+E
Sbjct: 160 ATASPLETLDDAIKQVDGLRSSLGAVQNRFESAVTNLNNTVTNLTSARSRIEDADYATEV 219
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ +S Q QQ LS N +LSL
Sbjct: 220 SNMSRAQILQQAGTSVLSQANQVPQTVLSLL 250
>gi|114054801|gb|ABI50001.1| FlaA [Clostridium botulinum]
Length = 271
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 1 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 61 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA + FN ++ + + ++
Sbjct: 121 RIASQTQFNTKSLINGAVSEDAKAMT 146
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 48/131 (36%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D ++ T + + I + + N + + + ++ ID+ I +
Sbjct: 141 DAKAMTFQIGANSGQTIKLTIGSMDAKTLKVDNIKLDDTAANITKQIATIDSAINSVSKE 200
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 201 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 260
Query: 439 VNNSTARILSL 449
N + +L L
Sbjct: 261 ANQAPQGVLQL 271
>gi|58039253|ref|YP_191217.1| flagellin B [Gluconobacter oxydans 621H]
gi|58001667|gb|AAW60561.1| Flagellin B [Gluconobacter oxydans 621H]
Length = 491
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 102/490 (20%), Positives = 171/490 (34%), Gaps = 40/490 (8%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN +AM+A Q L +L ++ VS+G V+ A+DN A +SIAQ M + LS
Sbjct: 3 LSINTNTAAMAALQSLNQTTADLTKTENAVSTGKSVNTASDNPAMYSIAQNMTAQISTLS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
VS + + ++ A G+S + ++ G D+ ++ IT+ S +
Sbjct: 63 GVSTGLQFSAQVLNTATQGLSSISASLQSLAT-TIGTNTTGVDNSTLNDAITKTLSAIDS 121
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
A G+ F G N L G+ T S + L + + +D++
Sbjct: 122 AATGAKFQGVNLLSGQTGNGTTYTTLSTAMDSQGTMFTQNGFNVTSAGLGLKNLSMDTTG 181
Query: 182 DGTERYGLLDRNHK---------------------------------------IKVEPQV 202
+ +
Sbjct: 182 MDIALGSTNYTGSQSLKLSSVPAIAAGTSGTTTTDAMGTATDPLVSYNFVMDEDGKKTDA 241
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
L ++ + ++ K A ++ A++ + + V T
Sbjct: 242 LSALNTASGGTFSYDASGKLTEAASTTTSTTASDGSVTFSLANGKSVVASKDGNGNAVYT 301
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
T + + A + S T + ++ N T Y S
Sbjct: 302 VTTGTDSNGNATAKTVISDVDLSGATGSDTATTTGSASQKMVNKTNLLTQAMQYQGFAVS 361
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKI 382
D+ + S + + + + I T A I
Sbjct: 362 RDSDNHLTVAGNNLDTSSDALTAANGLNSAATPTAVTGAAVVSTVVQAAISSVTRTASTI 421
Query: 383 GSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNS 442
G SS I + DA+ GVG L DAD+A+ES +L++LQT+QQLAVQ+LSI N+
Sbjct: 422 GYSSSTISNLLTTTSSLSDALTTGVGALTDADLAAESAKLTSLQTKQQLAVQSLSIANSQ 481
Query: 443 TARILSLFRG 452
++ +LSLFRG
Sbjct: 482 SSTLLSLFRG 491
>gi|261340322|ref|ZP_05968180.1| flagellin [Enterobacter cancerogenus ATCC 35316]
gi|288317413|gb|EFC56351.1| flagellin [Enterobacter cancerogenus ATCC 35316]
Length = 297
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 63/182 (34%), Gaps = 3/182 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++ L +L +R+SSGLR++ A D+AA +IA M + L
Sbjct: 1 MAVINTNLLSLTTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRMTAQVKGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQS 117
+ + G S + +++ + I+ + SI +E+
Sbjct: 61 TQAARNANDGISVAQTTEGALNEINTNLQRIRELTVQAQNGTNSADDLVSINNEVVDRMK 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +A +SFNG L T + A I
Sbjct: 121 EINRVAGQTSFNGVKVLSTAQTLNIQVGANDSETIGISLKKIDSSTLFAGNAKMSGITEG 180
Query: 178 DS 179
+
Sbjct: 181 ST 182
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 36/87 (41%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ ID I + +G+ +R + + + R+ DAD A+E + +S
Sbjct: 211 LAEIDKAISDVDSLRSSLGASQNRFESTVNNLNSTVTNITAAKSRIEDADYATEVSNMSR 270
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ LS N +LSL R
Sbjct: 271 AQILQQAGTSVLSQANQVPQTVLSLLR 297
>gi|114054838|gb|ABI50019.1| FlaA [Clostridium botulinum]
Length = 270
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 1 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 61 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I+ + FN ++ + + ++
Sbjct: 121 RISSQTQFNTKSLINGAVSEDAKAMT 146
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 45/130 (34%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D ++ T + + I + + + + + ++ ID I +
Sbjct: 141 DAKAMTFQIGANSGQTIKLTIGSMDAKTLKVDKIKLDDTAANVTKQIATIDNAINSVSKE 200
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 201 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 260
Query: 439 VNNSTARILS 448
N + +L
Sbjct: 261 ANQAPQGVLQ 270
>gi|20807004|ref|NP_622175.1| flagellin-like protein [Thermoanaerobacter tengcongensis MB4]
gi|20515488|gb|AAM23779.1| Flagellin and related hook-associated proteins [Thermoanaerobacter
tengcongensis MB4]
Length = 276
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 39/260 (15%), Positives = 86/260 (33%), Gaps = 7/260 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + L N+N + +++SSG R++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLSALNAWRALSINNFNTQKALEKLSSGYRINRAGDDAAGLAISEKMRGQINGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ + D +IQ EI QL++++
Sbjct: 63 IRNAQDGISLIQTAEGALNETHAILQRMRELVVQAANDTNTDVDRGNIQKEINQLKAEID 122
Query: 121 DIARGSSFNGENWLRTDLG----SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
IA + FN L L + + + + + T+
Sbjct: 123 RIASTTQFNTRTLLDGSLSTTGVTFQIGANAAQNMTLTIGKMDTTTLGVDTLDVSISTLS 182
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+ + + ++ + A + + A
Sbjct: 183 SSDIAAWLTTIDNAINKVSQQRADLGAVQNRLEHTINNLGVAAENLTAAESRIRDVDMAK 242
Query: 237 ATFDQAKGIATIPVPLPAAP 256
+ K
Sbjct: 243 EMMEFTKNNILQQAATAMLA 262
Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 37/95 (38%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ ++ ID I + +G++ +R+ + + + + + R+ D DMA
Sbjct: 182 SSSDIAAWLTTIDNAINKVSQQRADLGAVQNRLEHTINNLGVAAENLTAAESRIRDVDMA 241
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + QQ A L+ N +L L R
Sbjct: 242 KEMMEFTKNNILQQAATAMLAQANQQPQTVLQLLR 276
>gi|312913793|dbj|BAJ37767.1| flagellin [Salmonella enterica subsp. enterica serovar Typhimurium
str. T000240]
Length = 372
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 49/372 (13%), Positives = 94/372 (25%), Gaps = 11/372 (2%)
Query: 91 IKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVI 150
+K + I Q+ G ++ + A +
Sbjct: 1 MKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKDTAVTTKAYANN 60
Query: 151 GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
G+ + T + +
Sbjct: 61 GTTLDVSGLDDAAIKAATGGTNGTASVTGGAVKFDADNNKYFVTIGGFTGADAAKNGDYE 120
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
+ + + AT + A T Q V A A + +
Sbjct: 121 VNVATDGTVTLAAGATKTTMPAGATTKTEVQELKDTPAVVSADAKNALIAGGVDATDANG 180
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ + + G + A Y +T A T Y + TT +
Sbjct: 181 AELVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTTKTAANQ 240
Query: 331 LPKEIDSGYSMVTLNITRHANTDA-----------YNEKLAMEEMVSFIDTQIKCATAAA 379
L + T +A+ A E + ID + A
Sbjct: 241 LGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDALR 300
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ +R + + + + + R+ D+D A+E + +S Q QQ L+
Sbjct: 301 SDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQA 360
Query: 440 NNSTARILSLFR 451
N +LSL R
Sbjct: 361 NQVPQNVLSLLR 372
>gi|114054917|gb|ABI50058.1| FlaA [Clostridium botulinum]
Length = 264
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 70/176 (39%), Gaps = 3/176 (1%)
Query: 9 SAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
+AM+A + + +++SSGLR++ A D+AA +I++ M+ L S
Sbjct: 2 NAMNAXRNMSAXTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQASRNSQ 61
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARG 125
S + A+ +++ ++ ++ G D +I++EIT+L +++ I++
Sbjct: 62 DSISLIQTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEINRISQQ 121
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ FN + L I + + T + + +
Sbjct: 122 TEFNTQKLLSGGFKDKNFQIGANKAQTIKLTIGDMSAKTLGVSGVSVSDASKATDS 177
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 42/113 (37%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 152 TIGDMSAKTLGVSGVSVSDASKATDSIATIDKALGTVSTERAKLGANQNRLEHTINNLNT 211
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA E S Q A L+ N + +L L R
Sbjct: 212 SSENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLLR 264
>gi|189164081|gb|ABU96033.2| flagellin [Bacillus thuringiensis serovar sotto]
gi|189164085|gb|ABU96034.2| flagellin [Bacillus thuringiensis serovar sotto]
gi|189164089|gb|ABU96035.2| flagellin [Bacillus thuringiensis serovar sotto]
gi|189339452|gb|ABD33723.2| flagellin [Bacillus thuringiensis serovar sotto]
Length = 367
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M+S G L+
Sbjct: 3 INTNINSMRTQEYMRQNQTKMSNAMDRLSSGKRINNASDDAAGLAIATRMRSREGGLNVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ G S + A + ++ +++ +++ + ++Q E QL+ Q++
Sbjct: 63 ARNTEDGMSLIRTADSALNSVSNILLRMRDLANQSASETNTSKNQAAMQKEFDQLKEQIQ 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGS 152
IA + FN + L + S +
Sbjct: 123 YIADNTEFNDKKLLDGSNSTINIQTLDSHDKN 154
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/308 (9%), Positives = 84/308 (27%)
Query: 144 SIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
++A + + L + + + + +
Sbjct: 60 NVAARNTEDGMSLIRTADSALNSVSNILLRMRDLANQSASETNTSKNQAAMQKEFDQLKE 119
Query: 204 KDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTS 263
+ ++ +T + L + + + + + ++
Sbjct: 120 QIQYIADNTEFNDKKLLDGSNSTINIQTLDSHDKNKQITISLDSASLKNLDITDLAIGSN 179
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
+ + ++ S + +D V+A + S ++
Sbjct: 180 TVNKNDLDTLNNSMKRLETAAADAAVQAQDVTDAKNAFNKVKSGYTPAEVEKMEDAFKAY 239
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+ + +N T V ID I+ ++ +G
Sbjct: 240 DKVVADPAKTDALLKAAAEKINTEFKTLTAPTATAFDPSSSVEKIDKAIETIASSRATLG 299
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
+ +R+ +K +++ ++ DADMA E + ++ + + + LS N +
Sbjct: 300 ATLNRLDFNVTNLKSQENSMAASASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTP 359
Query: 444 ARILSLFR 451
+ L +
Sbjct: 360 QMVSKLLQ 367
>gi|291556688|emb|CBL33805.1| Flagellin and related hook-associated proteins [Eubacterium siraeum
V10Sc8a]
Length = 533
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 19/175 (10%), Positives = 50/175 (28%)
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
T + T ++ + T + +
Sbjct: 359 TDTNAPDGDVSVKFDTKTDDATKYQFTMDNGAGIGKDEVATTGKGLTFQIGANGVEDQRV 418
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + + + + + +D +K + +G++ +R+ + +
Sbjct: 419 TLNVNDMSSTAIGVANADVSTQDSANAAIDMVDAAVKTVSMQRAGLGALQNRLEYTVNNL 478
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + ++ D DMA+E + QQ + L+ N IL L +
Sbjct: 479 TTTNENLTAAESQIRDTDMATEMINYTKNNILQQASQAMLAQANQQPQAILQLLQ 533
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 39/222 (17%), Positives = 84/222 (37%), Gaps = 4/222 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N +A++A+ K+ + +++SSG +++ A DNAA +I++ M+S LS
Sbjct: 5 VVQHNLNAINANNKMNINVSGTKKATEKLSSGYQINRAGDNAAGLAISEKMRSQIRGLSQ 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD----SKSIQSEITQLQSQ 118
+ G S + A+ G+++ ++ ++ ++IQ E+ L+S+
Sbjct: 65 ATKNANDGISLIQTAEGGLNETHSILQRMRELAVQSANGTYQDDTDREAIQLEVDALKSE 124
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + +NG L LG S A + + + + + + V +
Sbjct: 125 IDRIASSTEYNGMKLLDGSLGGSKAVTEFGAKYGIVDATSTDLAGSILTSNVAGAKVTIA 184
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ K V V + +
Sbjct: 185 LGATKGGEAATWAADGKELVLNLVENETYSQDDIDKLIANAD 226
>gi|238920300|ref|YP_002933815.1| flagellin [Edwardsiella ictaluri 93-146]
gi|182342505|gb|ACB87390.1| flagellin 1 [Edwardsiella ictaluri]
gi|238869869|gb|ACR69580.1| flagellin [Edwardsiella ictaluri 93-146]
Length = 353
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 3/153 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN ++ A L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 3 LVINTNILSLEAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANINGLT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQ 118
S G S + +++ D + I+ SIQ EITQ +
Sbjct: 63 QASRNANDGISLAQTTEGALNEVNDNLQNIRRLTVQAQNGTNSESDLQSIQDEITQRLDE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
+ I+ + FNG L D + A
Sbjct: 123 INRISAQTDFNGVKVLSKDQSLTIQVGADDGQT 155
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 47/135 (34%)
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
+ + + + T I A + ++ ++ +D +
Sbjct: 219 SGTSAAGQAGYYIKTVNDSTGVATYTTATIDDKGVVTAGTKVTDLQTPLATLDKALSQVD 278
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
+G++ +R + + R+ DAD A+E + +S Q QQ L
Sbjct: 279 DLRSGLGAVQNRFDSVISNLDSTVTNLTASRSRIQDADYATEVSDMSRAQILQQAGTAVL 338
Query: 437 SIVNNSTARILSLFR 451
+ N ST +L+L R
Sbjct: 339 AKANQSTQNVLTLLR 353
>gi|218699513|ref|YP_002407142.1| flagellin [Escherichia coli IAI39]
gi|218369499|emb|CAR17266.1| flagellar filament structural protein, flagellin [Escherichia coli
IAI39]
Length = 568
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 80/273 (29%), Gaps = 3/273 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ S + +S A A
Sbjct: 184 KAATVSDLTAAGATGTGPYAVTTNNTALSASDALSRLKTGDTVTTTGSSAATYTYDAAKG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ + +GT+ S +
Sbjct: 244 NFTTQATVADGDVVNFANTLKPAAGTTASGVYT 276
Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 39/317 (12%), Positives = 95/317 (29%)
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
D + + + +D + +
Sbjct: 252 ADGDVVNFANTLKPAAGTTASGVYTRSTGDVKFDVDANGDVTIGGKAAYLDATGNLSTNN 311
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + T + + T + + T+ + T+ + +A
Sbjct: 312 AGIASSAKLSDLFASGSTLATTGSIQLSGTTYNFGAAATSGVTYTKTVSADTVLSTVQSA 371
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A +G + + + ++ N++ + + T ++ N
Sbjct: 372 ATANTAVTGATIKYNTGIQSATASFGGANTNGAGNSNDTYTDADKELTTTASYTINYNVD 431
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
T + + K + + +N T T+ + A ++ ++ +D I
Sbjct: 432 KDTGTVTVASNGAGATGKFAATVGAQAYVNSTGKLTTETTSAGTATKDPLAALDDAISSI 491
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G+I +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 492 DKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 551
Query: 436 LSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 552 LAKANQVPQQVLSLLQG 568
>gi|24215118|ref|NP_712599.1| endoflagellar filament core protein [Leptospira interrogans serovar
Lai str. 56601]
gi|24196180|gb|AAN49617.1| endoflagellar filament core protein [Leptospira interrogans serovar
Lai str. 56601]
Length = 282
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 71/172 (41%), Gaps = 3/172 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ A + L+ + ++ +++SSG+R++ A D+A+ ++++ M++ L
Sbjct: 3 INHNISAIFAHRTLKFNSESMGKDIEKLSSGMRINRAGDDASGLAVSEKMRTQILGLRRA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + + + + +++ I+ D + IQ E++QL ++
Sbjct: 63 EMNTEDGMSLIQTTEGYLQETHEIVQRIRVLAVQAANGIYTEEDRQQIQVEVSQLVDEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
IA + FN L + + +V I T++
Sbjct: 123 RIASQAEFNKMKLLTGAFARLNPTASMWFHMGANMHQRERVYIETMNTAALG 174
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 40/115 (34%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + L + + ++ D ++ + +G+ +R+ +
Sbjct: 168 MNTAALGLRNPTVLTFISLSTAGKANSVIGLADDALRSISKQRADLGAYYNRLEHAAKGL 227
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA + T + Q Q A L+ N +L L +
Sbjct: 228 MNAYENIQAAESRIRDTDMAEQMTSFTRYQILTQAATAMLAQANMKPQTVLQLLK 282
>gi|323977896|gb|EGB72982.1| flagellin [Escherichia coli TW10509]
Length = 568
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 80/273 (29%), Gaps = 3/273 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ S + +S A A
Sbjct: 184 KAATVSDLTAAGATGTGPYAVTTNNTALSASDALSRLKTGDTVTTTGSSAATYTYDAAKG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ + +GT+ S +
Sbjct: 244 NFTTQATVADGDVVNFANTLKPAAGTTASGVYT 276
Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 39/317 (12%), Positives = 95/317 (29%)
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
D + + + +D + +
Sbjct: 252 ADGDVVNFANTLKPAAGTTASGVYTRSTGDVKFDVDANGDVTIGGKAAYLDATGNLSTNN 311
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + T + + T + + T+ + T+ + +A
Sbjct: 312 AGIASSAKLSDLFASGSTLATTGSIQLSGTTYNFGAAATSGVTYTKTVSADTVLSTVQSA 371
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A +G + + + ++ N++ + + T ++ N
Sbjct: 372 ATANTAVTGATIKYNTGIQSATASFGGANTNGAGNSNDTYTDADKELTTTASYTINYNVD 431
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
T + + K + + +N T T+ + A ++ ++ +D I
Sbjct: 432 KDTGTVTVASNGAGATGKFAATVGAQAYVNSTGKLTTETTSAGTATKDPLAALDDAISSI 491
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G+I +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 492 DKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 551
Query: 436 LSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 552 LAKANQVPQQVLSLLQG 568
>gi|30577587|emb|CAD56695.1| flagellin [Escherichia coli]
Length = 349
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 65/180 (36%), Gaps = 3/180 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLNTQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S A+ +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTAEGALSEINNNLQRIRELTVQASTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + A I + + +
Sbjct: 124 DRVSGQTQFNGVNVLSKNDSMKIQIGANDNQTISIGLQQIDSTTLNLKGFTVSGMADFSA 183
Score = 93.3 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 48/137 (35%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ ST + + ++T A E + +D I
Sbjct: 213 TDTASNSTKYAVVDSATGKYMAATVVITSTAAAVTVGATEVAGAATAEPLKALDAAIAKV 272
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 273 DKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 332
Query: 436 LSIVNNSTARILSLFRG 452
LS N ++LSL +G
Sbjct: 333 LSKANQVPQQVLSLLQG 349
>gi|315927502|gb|EFV06838.1| flagellin B [Campylobacter jejuni subsp. jejuni DFVF1099]
Length = 320
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 77/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGGRISSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + +
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGT 212
>gi|113911629|gb|ABI48296.1| Fla1 flagellin [Butyrivibrio fibrisolvens]
Length = 409
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 53/409 (12%), Positives = 109/409 (26%), Gaps = 46/409 (11%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
A+ ++ D++ + D IQ+EI QL ++ IA + FN
Sbjct: 1 TAEGAFTEVHDMLQRMNELAVQAANGTNSESDRDDIQNEIDQLSQEIDRIASTTKFNETF 60
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE------------------- 173
L+ D+G +I G + T L+
Sbjct: 61 LLKGDIGLKQLNIDAHDAGLEGTLVQNSTRATFTMESLEAGEKYRIGGTQYTIGAKSNKE 120
Query: 174 -----------TVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
+ D + + L + + A+ I+
Sbjct: 121 VAAALKFSDDMIQGGEEGADASTEWKLTAGDTISIDGKTYTIIEGDNSDVANAKITNGYL 180
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
+G+ +K + A A + + ++ +
Sbjct: 181 NHLIVAGSTIKYNGNEVKRFTSTADGIDKADATLVTATAAYNMVAIELKAASSIGATDKA 240
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
+ D T++ T + NT + ++ + L + G
Sbjct: 241 ADIDKNPTTGKYLYDTTEITQTVGADQTIPNTVISFTIKKGYVNVQNALTLNLHVGADAA 300
Query: 343 TLNITR-------------HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRI 389
N + + A + I I+ +A ++G+I +R+
Sbjct: 301 MTNKINVTIEAMNSKSIGINGINVSDATGKAATYAIDAIADAIQRVSAQRAELGAIQNRL 360
Query: 390 HLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+ + + E R+ D DMA + S QQ L+
Sbjct: 361 EHSIRNLDNVVENTEAAESRIRDTDMADQMVEYSKNNILQQAGQSMLAQ 409
>gi|148380688|ref|YP_001255229.1| flagellin [Clostridium botulinum A str. ATCC 3502]
gi|153933748|ref|YP_001384972.1| flagellin [Clostridium botulinum A str. ATCC 19397]
gi|153937462|ref|YP_001388442.1| flagellin [Clostridium botulinum A str. Hall]
gi|226950142|ref|YP_002805233.1| flagellin [Clostridium botulinum A2 str. Kyoto]
gi|114054844|gb|ABI50022.1| FlaA [Clostridium botulinum]
gi|114054848|gb|ABI50024.1| FlaA [Clostridium botulinum]
gi|148290172|emb|CAL84291.1| flagellin [Clostridium botulinum A str. ATCC 3502]
gi|152929792|gb|ABS35292.1| flagellin [Clostridium botulinum A str. ATCC 19397]
gi|152933376|gb|ABS38875.1| flagellin [Clostridium botulinum A str. Hall]
gi|226843452|gb|ACO86118.1| flagellin [Clostridium botulinum A2 str. Kyoto]
Length = 275
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I+ + FN ++ + + ++
Sbjct: 123 RISSQTQFNTKSLINGAVSKDADAMT 148
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 46/133 (34%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D ++ T + + I + + + + ++ ID I +
Sbjct: 143 DADAMTFQIGANSGQTIKLTIGSMDAKTLNVDKIKLDDTAANVTKQIATIDNAINSVSKE 202
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 203 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 262
Query: 439 VNNSTARILSLFR 451
N + +L L R
Sbjct: 263 ANQAPQGVLQLLR 275
>gi|220917710|ref|YP_002493014.1| flagellin domain protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955564|gb|ACL65948.1| flagellin domain protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 278
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN ++++A + + + L+ R+SSG R++ A D+AA I+ +++ + +
Sbjct: 3 LSIRTNIASLNAQRNMSNTQNALDSSMSRLSSGYRITKAGDDAAGLGISTKLEAQIRSYN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQ 118
G S + ++A +++ ++++ ++ G + +Q+E QL +
Sbjct: 63 QAVRNANDGLSVIQTSEAALNETSNILTRLRELAMQAASDGIGDKERAYVQAEADQLTDE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIA 146
+ IA + +NG L S +
Sbjct: 123 IDRIANVTKYNGTALLSGTSTSLNFQVG 150
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ A + +S ID I+ + +G++ +R + I+ +A+ R+ D D
Sbjct: 182 FTSGTAARDALSSIDAAIETVSKNRADLGAVGNRFQSAINNIQSFSEALSAANSRIRDVD 241
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+A E++RL+ QQ V L+ N L L
Sbjct: 242 VAEETSRLARANILQQAGVSVLAQANQMPQLALKLL 277
>gi|114054799|gb|ABI50000.1| FlaA [Clostridium botulinum]
Length = 272
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 1 INHNLNAMNAXRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 61 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA + FN ++ + + ++
Sbjct: 121 RIASQTQFNTKSLINGAVSEDAKAMT 146
Score = 84.4 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 48/132 (36%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D ++ T + + I + + N + + + ++ ID+ I +
Sbjct: 141 DAKAMTFQIGANSGQTIKLTIGSMDAKTLKVDNIKLDDTAANITKQIATIDSAINSVSKE 200
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 201 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 260
Query: 439 VNNSTARILSLF 450
N + +L L
Sbjct: 261 ANQAPQGVLQLL 272
>gi|256833249|ref|YP_003161976.1| flagellin domain-containing protein [Jonesia denitrificans DSM
20603]
gi|256686780|gb|ACV09673.1| flagellin domain protein [Jonesia denitrificans DSM 20603]
Length = 295
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 99/265 (37%), Gaps = 5/265 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI N +A+++ + L + +L +++SSG R++ AAD+AA +I++ ++S G L
Sbjct: 3 LSINQNIAAVNSYRNLANTQNDLSKSLEKLSSGFRINRAADDAAGLAISEGLRSQVGGLK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
+ G S V A+ +++ ++ +++ +I++E L +
Sbjct: 63 VAARNAQDGISVVQTAEGALTETHAILQRLRDLAVQGANDSNNTEARDNIKTEADSLIKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I ++FNG L D+ + + +F +G + V +
Sbjct: 123 LGRIGESTNFNGTKLLSGDVD--SGTTGAQTTLNFQVGADGDANSRITVNLANANVVGVA 180
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ G ++ + + +V ++ST + +L +
Sbjct: 181 TALGYDTATGNVNATAFDVTDHASSQATITAVNAQIESVSTARAELGAYQNRFEHTIKNI 240
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTS 263
+ ++ + A
Sbjct: 241 NVAVENLSASESRIRDTDMAQEMVQ 265
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 43/103 (41%)
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
+A + + + ++ ++ QI+ + A ++G+ +R I + + +
Sbjct: 193 NATAFDVTDHASSQATITAVNAQIESVSTARAELGAYQNRFEHTIKNINVAVENLSASES 252
Query: 409 RLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D DMA E + + Q Q L+ N +LSL R
Sbjct: 253 RIRDTDMAQEMVQFTRAQILSQAGTAMLAQANQIPQGVLSLLR 295
>gi|227876808|ref|ZP_03994917.1| possible flagellin protein [Mobiluncus mulieris ATCC 35243]
gi|227842705|gb|EEJ52905.1| possible flagellin protein [Mobiluncus mulieris ATCC 35243]
Length = 511
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+S+ TN A+ A + + + + L +++SG R+++ D+AA ++A+ M+S
Sbjct: 233 SSLNTNVMALQAYRNMANAHKILNDSLLKLTSGERINNPGDDAAGLALAENMRSQLLGSK 292
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT--DSKSIQSEITQLQSQL 119
G S V A+ + +++ ++ G +I +E+ ++ ++
Sbjct: 293 QAVRNAQDGISLVQTAEGVLGTVHNMLQRMRVLAVQGASDSNQDQRGNIVTEMDSIRVEI 352
Query: 120 RDIARGSSFNGENW 133
I + G
Sbjct: 353 GRIGEATEVLGRKI 366
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 40/105 (38%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ A + + ID QI+ + A +G++ SR + + + + +
Sbjct: 404 HAQLGEIPQDASHEAFQGAIVNIDGQIEVISTARATLGAVMSRFENTINTLNVTVENLAA 463
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
GR+ D D +ES + Q + +S + +LSL
Sbjct: 464 ARGRIQDTDFTTESAEYMRGRILTQSSHAVMSQALLAPRGVLSLL 508
>gi|116328165|ref|YP_797885.1| endoflagellar filament core protein [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116330890|ref|YP_800608.1| endoflagellar filament core protein [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|116120909|gb|ABJ78952.1| Endoflagellar filament core protein [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116124579|gb|ABJ75850.1| Endoflagellar filament core protein [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 282
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 71/172 (41%), Gaps = 3/172 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ A + L+ + ++ +++SSG+R++ A D+A+ ++++ M++ L
Sbjct: 3 INHNISAIFAHRTLKFNSESMGKDIEKLSSGMRINRAGDDASGLAVSEKMRTQILGLRRA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + + + + +++ I+ D + IQ E++QL ++
Sbjct: 63 EMNTEDGMSLIQTTEGYLQETHEIVQRIRVLAVQAANGIYTEEDRQQIQVEVSQLVDEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
IA + FN L + + +V I T++
Sbjct: 123 RIASQAEFNKMKLLTGAFARLNPTASMWFHMGANMHQRERVYIETMNTAALG 174
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 40/115 (34%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + L + + ++ D ++ + +G+ +R+ +
Sbjct: 168 MNTAALGLRNPTVLTFISLSTAGKANSVIGLTDDALRTISKQRADLGAYYNRLEHAAKGL 227
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA + T + Q Q A L+ N +L L +
Sbjct: 228 MNAYENIQAAESRIRDTDMAEQMTSFTRYQILTQAATAMLAQANMKPQTVLQLLK 282
>gi|57242546|ref|ZP_00370484.1| flagellin (fla1) [Campylobacter upsaliensis RM3195]
gi|57016831|gb|EAL53614.1| flagellin (fla1) [Campylobacter upsaliensis RM3195]
Length = 612
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 42/190 (22%), Positives = 73/190 (38%), Gaps = 3/190 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNAGQLDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I + + ++ SS
Sbjct: 125 NIANTTSFNGKQLLSGGFINQEFQIGSQSNQTIKATIGPTQSNKIGLTRFETGAQIIKSS 184
Query: 181 TDGTERYGLL 190
Sbjct: 185 EVEMVIKNYN 194
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 36/97 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ ++T IG++ +++ + + I + + V+ + D D
Sbjct: 516 VTTLKGAMAVMDVVETATINLDQIRADIGAVQNQLQVTINNITVTQVNVKAAESNIRDVD 575
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A+S N +L L +
Sbjct: 576 FAAESANFSKYNILAQSGSYAMSQANQVQQNVLKLLQ 612
>gi|149188075|ref|ZP_01866370.1| flagellin [Vibrio shilonii AK1]
gi|149189131|ref|ZP_01867419.1| flagellin [Vibrio shilonii AK1]
gi|148837094|gb|EDL54043.1| flagellin [Vibrio shilonii AK1]
gi|148838063|gb|EDL55005.1| flagellin [Vibrio shilonii AK1]
Length = 382
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/368 (11%), Positives = 100/368 (27%), Gaps = 3/368 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNSASQAQATSMERLSSGHKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
G S A+ M++ +++ +++ + +IQ E+T L ++L
Sbjct: 64 AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNNEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA ++F G L G+ + I + + + + +
Sbjct: 124 NRIAETTAFGGNRLLNGTYGTQSFQIGSNNGEAVMLSLKDMRSDNSGMGGSVYQAANAKD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
L + + + T +
Sbjct: 184 KDWSVAANSTLTIDMNDSAGNAMTTLTINAKQGDDIEQLATYINGQTDLVQASVDEDGAL 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ SG + AA+ I + + +
Sbjct: 244 QVFASNNKDIDSASLSFGGTLAGSGELDMSGAAAAATVNDIDVTSVGGAQESVAILDSAM 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
++ + + + + + T ++
Sbjct: 304 KYVDSHRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTAMTKNQILSQAS 363
Query: 360 AMEEMVSF 367
+ +
Sbjct: 364 SSILAQAK 371
Score = 93.3 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 43/368 (11%), Positives = 99/368 (26%), Gaps = 7/368 (1%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQL------RDIARGSSFNGENWLRTDLGSST 142
N + + S +I + + S + G S
Sbjct: 15 QRYLNSASQAQATSMERLSSGHKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISI 74
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A A+ + ++ + +
Sbjct: 75 AQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQEEVTALNNELNRIAETTAFGG 134
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ ++ + S I + + S +++ N+ + A + A N+T
Sbjct: 135 NRLLNGTYGTQSFQIGSNNGEAVMLSLKDMRSDNSGMGGSVYQAANAKDKDWSVA-ANST 193
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ S A + I D + T + +D + + +
Sbjct: 194 LTIDMNDSAGNAMTTLTINAKQGDDIEQLATYINGQTDLVQASVDEDGALQVFASNNKDI 253
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKI 382
+ M N +E V+ +D+ +K + ++
Sbjct: 254 DSASLSFGGTLAGSGELDMSGAAAAATVNDIDVTSVGGAQESVAILDSAMKYVDSHRAEL 313
Query: 383 GSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNS 442
G+ +R + + + + + V R+ D D A E+T ++ Q Q + L+ +
Sbjct: 314 GAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTAMTKNQILSQASSSILAQAKQA 373
Query: 443 TARILSLF 450
LSL
Sbjct: 374 PNAALSLL 381
>gi|156973599|ref|YP_001444506.1| flagellin [Vibrio harveyi ATCC BAA-1116]
gi|156525193|gb|ABU70279.1| hypothetical protein VIBHAR_01302 [Vibrio harveyi ATCC BAA-1116]
Length = 374
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 71/183 (38%), Gaps = 3/183 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN +AM + L Q ++SG R++ A+D+AA I+ + L
Sbjct: 1 MVSLNTNVTAMMTQRHLGHAAEQNIESQRNLTSGYRINSASDDAAGLQISNTLNVQTRGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQS 117
S A+ + ++ D++ +++ G +D +SIQ E+ LQ
Sbjct: 61 DVALRNAHDAYSVAQTAEGALHESSDILQRLRSLGLQAANGSNDSSDRQSIQYEVVALQD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L +A ++F +N GS + I + + N + I + +
Sbjct: 121 ELDRVAITTTFADKNLFDGSYGSQSFHIGANANSISLTLRNMRSHIPEMGGQHYVGDAVD 180
Query: 178 DSS 180
Sbjct: 181 KDW 183
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 38/100 (38%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + + + ID IK + +IG +RI D + + +V + GR+
Sbjct: 274 DDIDMSTAGGAQLSIGVIDAAIKYVDSHRSEIGGFQNRISGTMDNLNTVNRSVTESKGRI 333
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D D A E+T + Q Q L+ + L L
Sbjct: 334 RDTDFAREATEMVRSQVLQDATTALLAQAKQRPSSALGLL 373
>gi|114054866|gb|ABI50033.1| FlaA [Clostridium botulinum]
Length = 275
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I+ + FN ++ + + ++
Sbjct: 123 RISSQTQFNTKSLINGAVSKXADAMT 148
Score = 85.6 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 39/102 (38%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
N + + + ++ ID I + K+G+ +R+ + + ++ R
Sbjct: 174 DNIKLDDTAANVTKQIATIDNAINSVSKERAKLGANQNRLEHTIANLDNSAENLQAAESR 233
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D DMA E + Q A L+ N + +L L R
Sbjct: 234 IRDVDMAKEMMNFTKTNILTQAAQAMLAQANQAPQGVLQLLR 275
>gi|116489820|gb|ABJ98817.1| phase I flagellin middle domain variant C12 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 386
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 44/296 (14%), Positives = 84/296 (28%), Gaps = 3/296 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ Y + + G + T
Sbjct: 184 TAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDDDYYSATQNKDGSISINTTKYTA 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
D + A + G + + ++ T
Sbjct: 244 DDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAATTTENP 299
Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats.
Identities = 45/388 (11%), Positives = 98/388 (25%), Gaps = 16/388 (4%)
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + S + A +S + + D + Q+ + + ++ +
Sbjct: 15 QNNLNKSQSALGTAIERLSSGLRI------------NSAKDDAAGQAIANRFTANIKGLT 62
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ S + + + + T LD + +
Sbjct: 63 QASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNE 122
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+R +VL + + + Q K
Sbjct: 123 IDRV----SGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQK 178
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ A S K+ + T ++ D + AT +
Sbjct: 179 YKVSDTAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDDDYYSATQNKDGSISINT 238
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
T T + + S + + A E
Sbjct: 239 TKYTADDGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAATTTEN 298
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ ID + +G++ +R + + + + R+ D+D A+E + +S
Sbjct: 299 PLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMS 358
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ L+ N +LSL R
Sbjct: 359 RAQILQQAGTSVLAQANQVPQNVLSLLR 386
>gi|320176072|gb|EFW51140.1| Flagellar biosynthesis protein FliC [Shigella dysenteriae CDC
74-1112]
Length = 568
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 80/273 (29%), Gaps = 3/273 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNALAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ S + +S A A
Sbjct: 184 KAATVSDLTAAGATGTGPYAVTTNNTALSASDALSRLKTGDTVTTTGSSAAIYTYDAAKG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ + +GT+ S +
Sbjct: 244 NFTTQATVADGDVVNFANTLKPAAGTTASGVYT 276
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/317 (12%), Positives = 95/317 (29%)
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
D + + + +D + +
Sbjct: 252 ADGDVVNFANTLKPAAGTTASGVYTRSTGDVKFDVDANGDVTIGGKAAYLDATGNLSTNN 311
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ V + T + + T + + T+ + T+ + +A
Sbjct: 312 AGIASSVKLSDLFASGSTLATTGSIQLSGTTYNFGAAATSGVTYTKTVSADTVLSTVQSA 371
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A +G + + + ++ N++ + + T ++ N
Sbjct: 372 ATANTAVTGATIKYNTGIQSATASFGGANTNGAGNSNDTYTDADKELTTTASYTINYNVD 431
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
T + + K + + +N T+ + A ++ ++ +D I
Sbjct: 432 KDTGTVTVASNGAGATGKFAATVGAQAYVNSIGKLTTETTSAGTATKDPLAALDEAISSI 491
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G+I +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 492 DKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 551
Query: 436 LSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 552 LAKANQVPQQVLSLLQG 568
>gi|291486065|dbj|BAI87140.1| hypothetical protein BSNT_05346 [Bacillus subtilis subsp. natto
BEST195]
Length = 273
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 59/186 (31%)
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL 325
+ +V A T + ++ G + T +T T
Sbjct: 88 QRMRELTVQAGNTGTQQTEDLTAIKDEMDALTEEIDGISQRTEFNGKKLLDGSETAGFTF 147
Query: 326 DSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
+ + I+ + D + + + + ID+ I + K+G++
Sbjct: 148 QIGANAGQNINVTIGNMDATTLGVKGIDVSADDFSFDTEIVKIDSAITSVSNQRAKLGAV 207
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445
+R+ + + + + R+ D DMA E + + Q + L+ N
Sbjct: 208 QNRLEHTINNLGASSENLTAAESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQQPQN 267
Query: 446 ILSLFR 451
+L L R
Sbjct: 268 VLQLLR 273
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/252 (16%), Positives = 88/252 (34%), Gaps = 4/252 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ +L N +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTLNRLSSNNSASSKNMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS----KSIQSEITQLQSQL 119
S G S + A+ +++ ++ ++ GT +I+ E+ L ++
Sbjct: 63 SKNSQDGISLIQTAEGALTETHAILQRMRELTVQAGNTGTQQTEDLTAIKDEMDALTEEI 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I++ + FNG+ L + + G I G + TT+ + S
Sbjct: 123 DGISQRTEFNGKKLLDGSETAGFTFQIGANAGQNINVTIGNMDATTLGVKGIDVSADDFS 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + + S++ A + + A
Sbjct: 183 FDTEIVKIDSAITSVSNQRAKLGAVQNRLEHTINNLGASSENLTAAESRIRDVDMAKEMS 242
Query: 240 DQAKGIATIPVP 251
+ K
Sbjct: 243 EFTKNNILSQAS 254
>gi|269960652|ref|ZP_06175024.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834729|gb|EEZ88816.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 374
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 71/183 (38%), Gaps = 3/183 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN +AM + L Q ++SG R++ A+D+AA I+ + L
Sbjct: 1 MVSLNTNVTAMMTQRHLSHAAEQNIESQRNLTSGYRINSASDDAAGLQISNTLNVQTRGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQS 117
S A+ + ++ D++ +++ G +D +SIQ E+ LQ
Sbjct: 61 DVALRNAHDAYSVAQTAEGALHESSDILQRLRSLGLQAANGSNDSSDRQSIQYEVVALQD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L +A ++F +N GS + I + + N + I + +
Sbjct: 121 ELDRVAITTTFADKNLFDGSYGSQSFHIGANANSISLTLRNMRSHIPEMGGQHYVGDAVD 180
Query: 178 DSS 180
Sbjct: 181 KDW 183
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 38/100 (38%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + + + ID IK + +IG +R+ D + + +V + GR+
Sbjct: 274 DDIDMSTVGGAQLSIGVIDAAIKYVDSHRSEIGGFQNRVSGTMDNLNTVNRSVTESKGRI 333
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D D A EST + Q Q L+ + L L
Sbjct: 334 RDTDFARESTEMVRSQVLQDATTALLAQAKQRPSSALGLL 373
>gi|226326544|ref|ZP_03802062.1| hypothetical protein PROPEN_00394 [Proteus penneri ATCC 35198]
gi|225205143|gb|EEG87497.1| hypothetical protein PROPEN_00394 [Proteus penneri ATCC 35198]
Length = 177
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 60/167 (35%), Gaps = 3/167 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN+ ++ L L R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 11 VINTNYLSLVTQNNLNRSQSALGNAIQRLSSGLRINSAKDDAAGQAIANRFTSNVKGLTQ 70
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
+ G S + +++ + + I+ SIQ E+ Q +++
Sbjct: 71 AARNANDGISIAQTTEGALNEINNNLQRIRELTVQAKNGSNSDSDIKSIQEEVNQRTAEI 130
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTI 166
I+ + FNG L D + A +
Sbjct: 131 NRISEQTQFNGVKVLSEDSTLNLQVGAHDKEQISVDLKKNGCHYIGY 177
>gi|308050014|ref|YP_003913580.1| flagellin domain protein [Ferrimonas balearica DSM 9799]
gi|307632204|gb|ADN76506.1| flagellin domain protein [Ferrimonas balearica DSM 9799]
Length = 271
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 81/234 (34%), Gaps = 3/234 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI TN++++ A L N + +R+S+G R++ A D+AA IA M++++ +
Sbjct: 1 MLSIQTNYNSLVAQNNLGKSNSAMGTAMERLSTGFRINSAKDDAAGLQIANRMEANSRGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
S + IA+ G+ + ++ +K+ T D ++ +E +L +
Sbjct: 61 SVAMRNGQDAIGMMQIAEGGLDEITNIALRMKDLATQSANGTNSAADKDALDAEFQELTA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ I + FNG N G T I S + T
Sbjct: 121 EVTRIMGTTEFNGNNVFTAFTGGVTFQIGGSTNANDKLTVTADTTDITTALAGLDIGDGG 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
D+ +D + + + + ++
Sbjct: 181 DTDAAIDGVVAAIDAVNAHRSTLGANINRVEHTINNLSSVVENTEAAKGRIMDT 234
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/267 (12%), Positives = 72/267 (26%)
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
Y L + + + + S K ++A + A
Sbjct: 5 QTNYNSLVAQNNLGKSNSAMGTAMERLSTGFRINSAKDDAAGLQIANRMEANSRGMSVAM 64
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + +A + +D +T++
Sbjct: 65 RNGQDAIGMMQIAEGGLDEITNIALRMKDLATQSANGTNSAADKDALDAEFQELTAEVTR 124
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
T GN + T T + T +IT + +
Sbjct: 125 IMGTTEFNGNNVFTAFTGGVTFQIGGSTNANDKLTVTADTTDITTALAGLDIGDGGDTDA 184
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ + I A +G+ +R+ + + + + E GR++D D A E+ ++
Sbjct: 185 AIDGVVAAIDAVNAHRSTLGANINRVEHTINNLSSVVENTEAAKGRIMDTDFAVETANMT 244
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLF 450
Q Q L+ N ++ L
Sbjct: 245 KNQLLVQAGTNILAQSNQMGGLVMGLL 271
>gi|319944151|ref|ZP_08018429.1| hag flagellin [Lautropia mirabilis ATCC 51599]
gi|319742645|gb|EFV95054.1| hag flagellin [Lautropia mirabilis ATCC 51599]
Length = 279
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 3/177 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++A + L L R+S+GLRV+ A D+AA +IA+ M + +
Sbjct: 1 MAVINTNIMSLNAQRNLSATQSALATSVQRLSTGLRVNSAKDDAAGLAIAERMNTQVRGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ S A+ +SK D+ ++ +D K++ +E L
Sbjct: 61 NVAIRNANDAISLSQTAEGALSKINDMGQRMRELAVQSANATNSDSDRKNLDAEYQALAE 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
+++ G++FNG + A + I + + +
Sbjct: 121 EIKRNLAGAAFNGTKLFAAAAALTFQVGANAASTDQITINTENLVGENKITAVIGNN 177
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 50/132 (37%)
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + + E G + +T I +A + + +D + +
Sbjct: 148 GANAASTDQITINTENLVGENKITAVIGNNAKPEGIATATTASAALGKLDEMLSLVNSKR 207
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+ G+ +R +++ + R++DAD ASE+ L+ Q QQ LS
Sbjct: 208 AEFGATQNRFEAVIQTLQVSAENQTAARSRIMDADFASETASLTRSQVLQQAGTAMLSQA 267
Query: 440 NNSTARILSLFR 451
N+ +LSL R
Sbjct: 268 NSLPNNVLSLLR 279
>gi|197122918|ref|YP_002134869.1| flagellin domain protein [Anaeromyxobacter sp. K]
gi|196172767|gb|ACG73740.1| flagellin domain protein [Anaeromyxobacter sp. K]
Length = 278
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN ++++A + + + L+ R+SSG R++ A D+AA I+ +++ + +
Sbjct: 3 LSIRTNIASLNAQRNMSNTQNALDSSMSRLSSGYRITKAGDDAAGLGISTKLEAQIRSYN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQ 118
G S + ++A +++ ++++ ++ G + +Q+E QL +
Sbjct: 63 QAVRNANDGLSVIQTSEAALNETSNILTRLRELAMQAASDGIGDKERAYVQAEADQLTDE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIA 146
+ IA + +NG L S +
Sbjct: 123 IDRIANVTKYNGTALLSGTATSLNFQVG 150
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ A + +S ID I+ + +G++ +R + I+ +A+ R+ D D
Sbjct: 182 FTSGTAARDALSSIDAAIETVSKNRADLGAVGNRFQSAINNIQSFSEALSAANSRIRDVD 241
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+A E++RL+ QQ V L+ N L L
Sbjct: 242 VAEETSRLARANILQQAGVSVLAQANQMPQLALKLL 277
>gi|496296|gb|AAA93103.1| thermoregulated motility protein [Yersinia enterocolitica (type
O:8)]
Length = 358
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 72/209 (34%), Gaps = 3/209 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLSTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + LG S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNAELGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + +
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTKTDSSYDFQVGSKDNEQISIAIGASSGWNLATANADGTS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + + K
Sbjct: 181 SDTVNTYAFTKTTALDTKQAAYDSANGAY 209
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/265 (13%), Positives = 77/265 (29%), Gaps = 1/265 (0%)
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+ + ++ + ++ + ++++D G
Sbjct: 95 TVQAQNSSNSASDIDSIQSEVNQRMEEINRVTKQTDFNGIKVLDNRTKTDSSYDFQVGSK 154
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
A A+ T+ + S TY + + + +S
Sbjct: 155 DNEQISIAIGASSGWNLATANADGTSSDTVNTYAFTKTTALDTKQAAYDSANGAYLAAVK 214
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
A G T + D+ ++ T A + K ++
Sbjct: 215 ADATNGTTTAAALKNAAVKDATAVNEAVNGKSRTVAAKGFDVLNGTVAADGKATGTSPLA 274
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
ID +K A +G+ +R + + + R+ DAD ++E + +S Q
Sbjct: 275 DIDKALKGLIPAHV-LGASQNRFESTITNLNNTVNNLTSARSRIQDADYSTEVSNMSRAQ 333
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 334 ILQQAGTSVLAQANQVPQTVLSLLR 358
>gi|323186803|gb|EFZ72123.1| flagellin [Escherichia coli RN587/1]
Length = 568
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 80/273 (29%), Gaps = 3/273 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDSSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ S + +S A A
Sbjct: 184 KAATVSDLTAAGATGTGPYAVTTNNTALSASDALSRLKTGDTVTTTGSSAATYTYDAAKG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ + +GT+ S +
Sbjct: 244 NFTTQATVADGDVVNFANTLKPAAGTTASGVYT 276
Score = 99.4 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 39/317 (12%), Positives = 95/317 (29%)
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
D + + + +D + +
Sbjct: 252 ADGDVVNFANTLKPAAGTTASGVYTRSTGDVKFDVDANGDVTIGGKAAYLDATGNLSTNN 311
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + T + + T + + T+ + T+ + +A
Sbjct: 312 ADIASSAKLSDLFASGSTLATTGSIQLSGTTYNFGAAATSGVTYTKTVSADTVLSTVQSA 371
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A +G + + + ++ N++ + + T ++ N
Sbjct: 372 ATANTAVTGATIKYNTGIQSATASFGGANTNGAGNSNDTYTDADKELTTTASYTINYNVD 431
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
T + + K + + +N T T+ + A ++ ++ +D I
Sbjct: 432 KDTGTVTVASNGAGATGKFAATVGAQAYVNSTGKLTTETTSAGTATKDPLAALDDAISSI 491
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G+I +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 492 DKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 551
Query: 436 LSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 552 LAKANQVPQQVLSLLQG 568
>gi|300928989|ref|ZP_07144489.1| bacterial flagellin [Escherichia coli MS 187-1]
gi|300463024|gb|EFK26517.1| bacterial flagellin [Escherichia coli MS 187-1]
Length = 257
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 3/180 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S A+ +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTAEGALSEINNNLQRIRELTVQASTGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L + A I + + +
Sbjct: 124 DRVSGQTQFNGVNVLSKNDSMKIQIGANDNQTISIGLQQIDSTTLNLKGFTVSGMADFSA 183
>gi|113911607|gb|ABI48285.1| Fla1 flagellin [Lachnospiraceae bacterium A4]
Length = 520
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 45/346 (13%), Positives = 96/346 (27%), Gaps = 8/346 (2%)
Query: 27 VQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAID 86
+++SSG RV+ AAD+AA +I++ M+ L+ S G S V A+ +++ D
Sbjct: 3 STEKLSSGYRVNRAADDAAGLAISEKMRKQIRGLTQGSRNAEDGISCVQTAEGALAEVQD 62
Query: 87 VMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD-----L 138
++ + D K IQ EI QL +++ ++ + FN L+ D
Sbjct: 63 MLQRMNELAVQATNGTNSVTDRKYIQDEIDQLVTEIDRVSETTKFNETYLLKGDEELPEN 122
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
T + AK + + + + + G +
Sbjct: 123 LVHTFNYAKGDKIDQLGTSSVLNAKSDRVMVNYNGVDNVYVVSASISSAGSKESMTADVK 182
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
++ + + S ++T+ + K A
Sbjct: 183 TKGSDFTKYLASGEVGTSSSVTSVAMSTSYAMFKNTNLNGVALQKMANGTVYADKDAYIY 242
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
T K+ G D + + + + V
Sbjct: 243 DTETKNIIHIKATEDLGPYVKHIDGADDSTYTMDKRYRLLYNVNPEVTGFEDTLGMPKTV 302
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
D + ++ + + + +
Sbjct: 303 DLLTKNDFLGATSENQLYNKDGEAITGTGLYKYFNENGDYTGGLYA 348
Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats.
Identities = 37/316 (11%), Positives = 80/316 (25%), Gaps = 3/316 (0%)
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ + + NG V Y D ET + + +
Sbjct: 208 MSTSYAMFKNTNLNGVALQKMANGTVYADKDAYIYDTETKNIIHIKATEDLGPYVKHIDG 267
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ +Y+ + ++ + L L N A
Sbjct: 268 ADDSTYTMDKRYRLLYNVNPEVTGFEDTLGMPKTVDLLTKNDFLGATSENQLYNKDGEAI 327
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
+++ + I TT + + T
Sbjct: 328 TGTGLY---KYFNENGDYTGGLYADKDATKKIIENDTTSSLYYGKYITNLTEKVTAALTS 384
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ L++R + S + + + E + + +K
Sbjct: 385 SVHAGADSDLNNRISATIDTMSAAGLGVNKLKSSSIGIVDETGDNARESIDVVGEALKIV 444
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ +G++ +R+ + + + + D DMA E + S Q Q
Sbjct: 445 STQRSILGAVQNRLEHTIANLDNVVENTTAAESAIRDTDMADEMVKFSNNQVLLQAGQSI 504
Query: 436 LSIVNNSTARILSLFR 451
L+ N S +LSL +
Sbjct: 505 LAQANQSNQGVLSLLQ 520
>gi|187478162|ref|YP_786186.1| flagellin [Bordetella avium 197N]
gi|115422748|emb|CAJ49276.1| flagellin [Bordetella avium 197N]
Length = 377
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 71/210 (33%), Gaps = 3/210 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN+ ++ A L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 3 AVINTNYLSLVAQNNLNKSQSALGSAIERLSSGLRINSAKDDAAGQAIANRFTANVKGLT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQ 118
+ G S + +++ + + I+ SIQ+E+TQ +
Sbjct: 63 QAARNANDGISIAQTTEGALNEINNNLQRIRQLTVQATNGTNSQTDLDSIQAEVTQRLEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ ++ + FNG L + S A I + +D
Sbjct: 123 ITRVSEQTQFNGVKVLAKEGKLSIQVGANDGETIEIDLKQIDAKTLKLDSLTLNSAQDAK 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
++ N KV
Sbjct: 183 ATVAADVVAFTGTANAAAKVPTVTAVTGTT 212
Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/351 (12%), Positives = 93/351 (26%), Gaps = 6/351 (1%)
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
+ + Q+ + + G S A + + +
Sbjct: 33 SSGLRINSAKDDAAGQAIANRFTANVKGLTQAARNANDGISIAQTTEGALNEINNNLQRI 92
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
Q+T LDS + + + +K + + +
Sbjct: 93 RQLTVQATNGTNSQTDLDSIQAEVTQRLEEITRVSEQTQFNGVKVLAKEGKLSIQVGAND 152
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ A AA T + + +K P+V A
Sbjct: 153 GETIEIDLKQIDAKTLKLDSLTLNSAQDAKATVAADVVAFTGTANAAAKVPTVTAVTGTT 212
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+G + S N + + + + + +
Sbjct: 213 DLGTA------APAAGDVSIVTDKNGNLWAKVDAVAGASRKGVAAGDSLYVAIKKEDIAI 266
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T + + K E ++ ID+ ++ +G+I +R +
Sbjct: 267 ATDGTATIASVDFSKAAKAQTESPLAAIDSAMQTVDNLRSDLGAIQNRFESTIANLNNTV 326
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R+ DAD A+E + ++ Q QQ L+ N +LSL R
Sbjct: 327 NNLSAARSRIEDADYATEVSNMTKAQILQQAGTSVLAQANQVPQTVLSLLR 377
>gi|229069311|ref|ZP_04202601.1| Flagellin [Bacillus cereus F65185]
gi|228713798|gb|EEL65683.1| Flagellin [Bacillus cereus F65185]
Length = 370
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++ + +R + DR+SSG R+++A+D+AA +IA M++ L+
Sbjct: 3 INTNINSLRTQEYMRQNQSKMSNSMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + M+ +++ +++ ++ ++Q E +LQ Q+
Sbjct: 63 ANNTQDGMSLIRTADSAMNSVSNILLRMRDIANQSANGTNTDSNKSALQKEFDELQKQIT 122
Query: 121 DIARGSSFNGENWLRTDL 138
IA + FN +N L+ D
Sbjct: 123 YIADNTQFNDKNLLKEDS 140
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 45/140 (32%)
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
++ + ++ L EK E V ID
Sbjct: 231 MDSTEAKAIDDALGKFKEGTATAATVKEITDALKGATLPKATDAAEKDNALEAVKAIDKA 290
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ +G+ +R+ + +K ++ ++ DADMA E + ++ + +
Sbjct: 291 LTTVADNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEA 350
Query: 432 AVQALSIVNNSTARILSLFR 451
+ LS N + + L +
Sbjct: 351 GISMLSQANQTPQMVSKLLQ 370
>gi|187730503|ref|YP_001879712.1| flagellin [Shigella boydii CDC 3083-94]
gi|187427495|gb|ACD06769.1| flagellin [Shigella boydii CDC 3083-94]
Length = 568
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 81/273 (29%), Gaps = 3/273 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNALAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + S + +S A A
Sbjct: 184 KAATVSDLTAAGATGTGPYAVTTNNTVLSASDALSRLKTGDTVTTTGSSAAIYTYDAAKG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ + +GT+ S +
Sbjct: 244 NFTTQATVADGDVVNFANTLKPAAGTTASGVYT 276
Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 39/317 (12%), Positives = 95/317 (29%)
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
D + + + +D + +
Sbjct: 252 ADGDVVNFANTLKPAAGTTASGVYTRSTGDVKFDVDANGDVTIGGKAAYLDATGNLSTNN 311
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + T + + T + + T+ + T+ + +A
Sbjct: 312 AGIASSAKLSDLFASGSTLATTGSIQLSGTTYNFGAAATSGVTYTKTVSADTVLSTVQSA 371
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A +G + + + ++ N++ + + T ++ N
Sbjct: 372 ATANTAVTGATIKYNTGIQSATASFGGANTNGAGNSNDTYTDADKELTTTASYTINYNVD 431
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
T + + K + + +N T T+ + A ++ ++ +D I
Sbjct: 432 KDTGTVTVASNGAGATGKFAATVGAQAYVNSTGKLTTETTSAGTATKDPLAALDEAISSI 491
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G+I +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 492 DKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 551
Query: 436 LSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 552 LAKANQVPQQVLSLLQG 568
>gi|183221514|ref|YP_001839510.1| flagellar filament 35 kDa core protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189911599|ref|YP_001963154.1| endoflagellar filament core protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167776275|gb|ABZ94576.1| Endoflagellar filament core protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167779936|gb|ABZ98234.1| Flagellar filament 35 kDa core protein (Flagellin class B; 35 kDa
antigen) [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 282
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 64/158 (40%), Gaps = 3/158 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ + + L+ ++++ +S+G R++ A D+A+ ++++ +++ L
Sbjct: 3 INHNMSAIQSHRALKFTQWDVDKTMRNLSTGQRINLAGDDASGLAVSEKLRTQIRGLRQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + A+ + ++ +++ I+ D + +Q E++ L ++
Sbjct: 63 ERNTEDGLSFIQTAEGYLDQSAEIIQRIRTLAIQTSNGIYTPEDRQLVQVEVSALVDEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN 158
IA + FN D + +
Sbjct: 123 RIASQAEFNKMKLFEGDFARKSTKASMWFHMGANARQR 160
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 35/95 (36%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ +E ++ D + +G+ +R+ + + ++ R+ DADM
Sbjct: 185 STPGKADEAIAKADFALNKIMKQRADMGAYQNRLESTAKGLMGAYENMQASESRIRDADM 244
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A E L+ Q Q L+ + +L L
Sbjct: 245 AEEMVALTTKQILVQSGTAMLAQASLRPNSVLRLL 279
>gi|114054864|gb|ABI50032.1| FlaA [Clostridium botulinum]
Length = 275
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNARRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I+ + FN ++ + + ++
Sbjct: 123 RISSQTQFNTKSLINGAVSKXADAMT 148
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 39/102 (38%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
N + + + ++ ID I + K+G+ +R+ + + ++ R
Sbjct: 174 DNIKLDDTAANVTKQIATIDNAINSVSKERAKLGANQNRLEHTIANLDNSAENLQAAESR 233
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D DMA E + Q A L+ N + +L L R
Sbjct: 234 IRDVDMAKEMMNFTKTNILTQAAQAMLAQANQAPQGVLQLLR 275
>gi|284810844|gb|ADB96220.1| FliC* [Yersinia enterocolitica]
Length = 366
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 71/209 (33%), Gaps = 3/209 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + + +
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTATDSSYDFQVGSKDNEQISIAIGKSSGWNLATAKADGTS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + +
Sbjct: 181 TDTVNTYAFTKKAALDTAQTEYDTANTAY 209
Score = 94.4 bits (232), Expect = 4e-17, Method: Composition-based stats.
Identities = 40/364 (10%), Positives = 90/364 (24%)
Query: 88 MSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
+ + S+S + S I + S+ +
Sbjct: 3 VINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGLTV 62
Query: 148 SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
+ + + + + + D + I+ E +
Sbjct: 63 AARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRMEEI 122
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
V + K T + + + D + I A ++
Sbjct: 123 NRVTKQTDFNGIKVLDNRTATDSSYDFQVGSKDNEQISIAIGKSSGWNLATAKADGTSTD 182
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
+ + + ++ T + + T K + DS
Sbjct: 183 TVNTYAFTKKAALDTAQTEYDTANTAYLAAVKSGVAGDITTTKATLDGKNTTLATAVKDS 242
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
++ + T ++ ID +K +G+ +
Sbjct: 243 TAVNEAVNGKARTVAAKGFDVLSGTVDSAGVATGTTPLADIDKALKAVDTQRSVLGASQN 302
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
R + + + R+ DAD ++E + +S Q QQ L+ N +L
Sbjct: 303 RFESTITNLNNTVNNLTSARSRIQDADYSTEVSNMSRAQILQQAGTSVLAQANQVPQTVL 362
Query: 448 SLFR 451
SL R
Sbjct: 363 SLLR 366
>gi|157145278|ref|YP_001452597.1| hypothetical protein CKO_01015 [Citrobacter koseri ATCC BAA-895]
gi|157082483|gb|ABV12161.1| hypothetical protein CKO_01015 [Citrobacter koseri ATCC BAA-895]
Length = 290
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/188 (22%), Positives = 72/188 (38%), Gaps = 3/188 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++ L L +R+SSGLR++ A D+AA +I+ S+ L
Sbjct: 1 MAVINTNLMSLTTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAISNRFTSNIKGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ + G S A+ +++ + + I+ G+D SIQSE+ Q
Sbjct: 61 TQAARNANDGISIAQTAEGSLNEINNNLQRIRELAVQAQNGTNSGSDIDSIQSEVNQRLD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +A S FNG L ++T SI + D + +
Sbjct: 121 EINRVASQSQFNGIKILAGTDSATTISIQVGANDTQKIDITINGNSGWNKFDSTGTAGVT 180
Query: 178 DSSTDGTE 185
G
Sbjct: 181 TGLASGET 188
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 39/89 (43%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+++S IDT +K +G+I +R + + R+ DAD A+E + +
Sbjct: 202 DVLSSIDTALKAVDTQRSDLGAIQNRFESTISNLNNTVTNLSAAQSRIQDADYATEVSNM 261
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q QQ LS N +LSL R
Sbjct: 262 SRAQILQQAGTSVLSQANQVPQTVLSLLR 290
>gi|238920293|ref|YP_002933808.1| flagellin [Edwardsiella ictaluri 93-146]
gi|182342509|gb|ACB87394.1| flagellin 4 [Edwardsiella ictaluri]
gi|238869862|gb|ACR69573.1| flagellin [Edwardsiella ictaluri 93-146]
Length = 356
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 78/273 (28%), Gaps = 3/273 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNILSLQAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANINGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ D + I+ SIQ EITQ ++
Sbjct: 64 ASRNANDGISLAQTTEGALNEVNDNLQNIRRLTVQAQNGSNSESDLQSIQDEITQRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FNG L D + A I ++ +
Sbjct: 124 NRISAQTDFNGVKVLSKDQTLTIQVGADDGQTIGINLSKIDATTLKLNTFDVTNNKNRVG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S K L V T + + + ++
Sbjct: 184 SAIEAGTSINYTNAGKAATGSLELTKGQTLVSGTDATGAATYYLKGVDAATGKVTYSSVK 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
V + A +
Sbjct: 244 FTVDAKDATKVTVAADKDVTKDIQTPLADVDSA 276
Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/357 (12%), Positives = 96/357 (26%), Gaps = 1/357 (0%)
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
+ + S Q+ + + QS L A +G ++ +IA +
Sbjct: 1 MAQVINTNILSLQAQNNLNKSQSALGT-AIERLSSGLRINSAKDDAAGQAIANRFTANIN 59
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
L+ D + L + +
Sbjct: 60 GLTQASRNANDGISLAQTTEGALNEVNDNLQNIRRLTVQAQNGSNSESDLQSIQDEITQR 119
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ +G + + + T G TT + +
Sbjct: 120 LDEINRISAQTDFNGVKVLSKDQTLTIQVGADDGQTIGINLSKIDATTLKLNTFDVTNNK 179
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ I K + S T+ + +D+
Sbjct: 180 NRVGSAIEAGTSINYTNAGKAATGSLELTKGQTLVSGTDATGAATYYLKGVDAATGKVTY 239
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+++ + T+ + ++ ++ +D+ + +G++ +R
Sbjct: 240 SSVKFTVDAKDATKVTVAADKDVTKDIQTPLADVDSALAQVDKLRSGLGAVQNRFDSVIS 299
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R+ DAD A+E + +S Q QQ L+ N ST +LSL R
Sbjct: 300 NLDSTVTNLSASRSRIQDADYATEVSDMSRAQILQQAGTAVLAKANQSTQNVLSLLR 356
>gi|170791545|gb|ACB38414.1| flagellin A [Aeromonas salmonicida subsp. masoucida]
Length = 305
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 73/205 (35%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + N +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNLMNTNKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E QL +++
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYDQLMTEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A ++F G+N L + A + R V ++
Sbjct: 125 RVAGDTTFGGQNLLNGGYEGTFQVGADAGQTITFRMTTAFTISGMASATKGNAVVAATTA 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ V
Sbjct: 185 GSKEPYKVTPSTTGNVAVADMNSIT 209
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 52/138 (37%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
T+ + + + + T A+ ++ + + ++ +D IK
Sbjct: 168 GMASATKGNAVVAATTAGSKEPYKVTPSTTGNVAVADMNSITAASSAQSAMANLDYMIKV 227
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ ++G++ +R + + V R+ DAD A+E+ L+ QQ A
Sbjct: 228 VDSKRAELGAVQNRFDSTIRNQANISENVNAARSRIRDADFATETANLTKQNILQQAAST 287
Query: 435 ALSIVNNSTARILSLFRG 452
LS N LSL +G
Sbjct: 288 ILSQANQRPQSALSLLQG 305
>gi|315058811|gb|ADT73140.1| Flagellin [Campylobacter jejuni subsp. jejuni S3]
Length = 573
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 92/279 (32%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + +
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRITSGG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ K + ++
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGTGLGALADEINKNADKTGVRATFTVETRGMAAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + + T G + S
Sbjct: 245 RAGTTSNDFAINGVTIGKVDYTDGDGNGALVAAINSVKD 283
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + + I + + V+ + D D
Sbjct: 477 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVD 536
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A+S N +L L +
Sbjct: 537 FAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 573
>gi|114054797|gb|ABI49999.1| FlaA [Clostridium botulinum]
Length = 275
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I+ + FN ++ + + + ++
Sbjct: 123 RISSQTQFNTKSLINGAVSKAADAMT 148
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 39/102 (38%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
N + + + ++ ID I + K+G+ +R+ + + ++ R
Sbjct: 174 DNIKLDDTAANVTKQIATIDNAINSVSKERAKLGANQNRLEHTIANLDNSAENLQAAESR 233
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D DMA E + Q A L+ N + +L L R
Sbjct: 234 IRDVDMAKEMMNFTKTNILTQAAQAMLAQANQAPQGVLQLLR 275
>gi|145299590|ref|YP_001142431.1| flagellin A [Aeromonas salmonicida subsp. salmonicida A449]
gi|142852362|gb|ABO90683.1| flagellin A [Aeromonas salmonicida subsp. salmonicida A449]
Length = 307
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 73/205 (35%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + N +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 7 INTNVSSLNAQRNLMNTNKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 66
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E QL +++
Sbjct: 67 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYDQLMTEID 126
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A ++F G+N L + A + R V ++
Sbjct: 127 RVAGDTTFGGQNLLNGGYEGTFQVGADAGQTITFRMTTAFTISGMASATKGNAVVAATTA 186
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ V
Sbjct: 187 GSKEPYKVTPSTTGNVAVADMNSIT 211
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 52/138 (37%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
T+ + + + + T A+ ++ + + ++ +D IK
Sbjct: 170 GMASATKGNAVVAATTAGSKEPYKVTPSTTGNVAVADMNSITAASSAQSAMANLDYMIKV 229
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ ++G++ +R + + V R+ DAD A+E+ L+ QQ A
Sbjct: 230 VDSKRAELGAVQNRFDSTIRNQANISENVNAARSRIRDADFATETANLTKQNILQQTAST 289
Query: 435 ALSIVNNSTARILSLFRG 452
LS N LSL +G
Sbjct: 290 ILSQANQRPQSALSLLQG 307
>gi|114054809|gb|ABI50005.1| FlaA [Clostridium botulinum]
Length = 272
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 1 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 61 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I+ + FN ++ + + + ++
Sbjct: 121 RISSQTQFNTKSLINGAVSKTADAMT 146
Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 46/132 (34%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
++ T + + I + + N + + + ++ ID I +
Sbjct: 141 TADAMTFQIGANSGQTIKLTIGSMDAKTLKVDNIKLDDTAANVTKQIATIDNAINSVSKE 200
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 201 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 260
Query: 439 VNNSTARILSLF 450
N + +L L
Sbjct: 261 ANQAPQGVLQLL 272
>gi|126697810|ref|YP_001086707.1| flagellin subunit [Clostridium difficile 630]
gi|6456511|gb|AAF09167.1|AF065259_1 flagellin subunit FliC [Clostridium difficile]
gi|10281483|gb|AAG15514.1|AF095236_1 flagellin subunit FliC [Clostridium difficile]
gi|115249247|emb|CAJ67060.1| Flagellin C [Clostridium difficile]
Length = 290
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 76/203 (37%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN SA+ A+ ++ +++SSG+R+ AAD+AA +I++ M++ L
Sbjct: 3 VNTNVSALIANNQMGRNVNGQSKSMEKLSSGVRIKRAADDAAGLAISEKMRAQIKGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ G S V A+ + + +++ ++ + + I E+TQL+ ++
Sbjct: 63 GRNVQDGISVVQTAEGSLEETGNILQRMRTLSLQSANEINNTEEREKIADELTQLKDEIE 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FNG+ L + + S + N +I +
Sbjct: 123 RISSSTEFNGKKLLDGTSSTIRLQVGASYGTNVSGTSNNNNEIKIQLVNTASIMASAGIT 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
T + V
Sbjct: 183 TASIGSMKAGGTTGTDAAKTMVS 205
Score = 104 bits (257), Expect = 5e-20, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 51/139 (36%)
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
T+ + + + + + +T A + MVS +D
Sbjct: 151 YGTNVSGTSNNNNEIKIQLVNTASIMASAGITTASIGSMKAGGTTGTDAAKTMVSSLDAA 210
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+K ++ K+G+ +R+ ++ + + V R+ D D+ASE LS + Q
Sbjct: 211 LKSLNSSRAKLGAQQNRLESTQNNLNNTLENVTAAESRIRDTDVASEMVNLSKMNILVQA 270
Query: 432 AVQALSIVNNSTARILSLF 450
+ L+ N +L L
Sbjct: 271 SQSMLAQANQQPQGVLQLL 289
>gi|2384649|gb|AAC45642.1| flagellin protein [Aeromonas salmonicida]
gi|170791547|gb|ACB38415.1| flagellin A [Aeromonas salmonicida subsp. salmonicida]
Length = 305
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 73/205 (35%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + N +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNLMNTNKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E QL +++
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYDQLMTEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A ++F G+N L + A + R V ++
Sbjct: 125 RVAGDTTFGGQNLLNGGYEGTFQVGADAGQTITFRMTTAFTISGMASATKGNAVVAATTA 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ V
Sbjct: 185 GSKEPYKVTPSTTGNVAVADMNSIT 209
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 52/138 (37%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
T+ + + + + T A+ ++ + + ++ +D IK
Sbjct: 168 GMASATKGNAVVAATTAGSKEPYKVTPSTTGNVAVADMNSITAASSAQSAMANLDYMIKV 227
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ ++G++ +R + + V R+ DAD A+E+ L+ QQ A
Sbjct: 228 VDSKRAELGAVQNRFDSTIRNQANISENVNAARSRIRDADFATETANLTKQNILQQTAST 287
Query: 435 ALSIVNNSTARILSLFRG 452
LS N LSL +G
Sbjct: 288 ILSQANQRPQSALSLLQG 305
>gi|312109480|ref|YP_003987796.1| flagellin domain protein [Geobacillus sp. Y4.1MC1]
gi|311214581|gb|ADP73185.1| flagellin domain protein [Geobacillus sp. Y4.1MC1]
Length = 270
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/261 (15%), Positives = 85/261 (32%), Gaps = 3/261 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++ ++L N +++SSG R++ A D+AA +I++ M+ L
Sbjct: 3 IQHNISALNTYRQLSFNNTQAAKNLEKLSSGYRINRAGDDAAGLAISEKMRGQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D K+IQ EI L S++
Sbjct: 63 SKNAQDGISLIQTAEGALNETHAILQRMRELAVQAANDTNVTADRKAIQDEINALVSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + L I + S L ++
Sbjct: 123 RIAANTEFNTQKLLDGTFSGKAFQIGANSGQSITLTIATMNATALGVNALKVTNAASANN 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + V ++ ++ + T + + F
Sbjct: 183 AITKINNAIEKVSTERSKLGAVQNRLEHTINNLGATAENLTAAESRIRDVDMAKEMMEFT 242
Query: 241 QAKGIATIPVPLPAAPAAPNT 261
+ + + A
Sbjct: 243 KNNILMQAAQAMLAQSNQMPQ 263
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 42/133 (31%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
T S + + N + ++ I+ I+ +
Sbjct: 138 GTFSGKAFQIGANSGQSITLTIATMNATALGVNALKVTNAASANNAITKINNAIEKVSTE 197
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G++ +R+ + + + + R+ D DMA E + Q A L+
Sbjct: 198 RSKLGAVQNRLEHTINNLGATAENLTAAESRIRDVDMAKEMMEFTKNNILMQAAQAMLAQ 257
Query: 439 VNNSTARILSLFR 451
N +L L R
Sbjct: 258 SNQMPQGVLQLLR 270
>gi|301167391|emb|CBW26973.1| putative flagellin subunit [Bacteriovorax marinus SJ]
Length = 277
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 68/161 (42%), Gaps = 3/161 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L N +++SSG R+ +AD+AA +I++ MK+ + +
Sbjct: 5 IATNTTSLAAQRTLGANNTEQAKTLNKLSSGTRIVRSADDAAGLAISEKMKAQLRSTNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
G S + A+ G+S+ +++ ++ ++ K E L+ ++
Sbjct: 65 ERNANDGISMIQTAEGGLSEIGNILVRMRELSVQSASDTVGDSERKFTDLEYQNLKQEME 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV 161
I++ + FNG+ L I + R
Sbjct: 125 RISQVTEFNGKKLLNGAGEKYDFQIGINNDEFQDRISFDTQ 165
Score = 94.0 bits (231), Expect = 5e-17, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 39/96 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ K + + +D I+ + ++G+ +R+ + +++ + + R+ D D
Sbjct: 181 VSSKEDAQSGLESLDNAIQMVSGQRAELGAKQNRLSFTINNLQISSENLSAANSRIRDTD 240
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A+E+ + + L L+ N+ L L
Sbjct: 241 FAAETAKNTKLNILTNAGTSVLAQSNSQGQAALKLI 276
>gi|332161356|ref|YP_004297933.1| flagellin [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
gi|259045868|gb|ACV91383.1| FliC2 [Yersinia enterocolitica]
gi|318605281|emb|CBY26779.1| flagellar biosynthesis protein FliC [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325665586|gb|ADZ42230.1| flagellin [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
Length = 381
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 86/260 (33%), Gaps = 3/260 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + + + +
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTATDSSYDFQVGSKDNEQISIAIGKSSGWNLAAAGTGGVS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + + + D+ + ++ T + A + A
Sbjct: 181 GDTINTYKFTTTTALDTAKTAVATKTTDLATAEKAYQKAVADDVANGTTLADATARDAAK 240
Query: 238 TFDQAKGIATIPVPLPAAPA 257
T + A
Sbjct: 241 TALTTANGTYTTALKTSTDA 260
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 46/351 (13%), Positives = 92/351 (26%), Gaps = 1/351 (0%)
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
+ + Q+ + + G S + A+ +G +
Sbjct: 32 SSGLRINSAKDDAAGQAIANRFTSNINGLTVAARNANDGISLSQTAEGALGEINNNLQRV 91
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+T +DS + + + +K +D S
Sbjct: 92 RDLTVQAQNSSNSASDIDSIQSEVNQRMEEINRVTKQTDFNGIKVLDNRTATDSSYDFQV 151
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
K + ++ A G + TT+ + + + +
Sbjct: 152 GSKDNEQISIAIGKSSGWNLAAAGTGGVSGDTINTYKFTTTTALDTAKTAVATKTTDLAT 211
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
V N T T AK T + S + +
Sbjct: 212 AEKAYQKAVADDVANGTTLAD-ATARDAAKTALTTANGTYTTALKTSTDAGEAVNGNART 270
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
+ A + A ++ ID +K +G+ +R +
Sbjct: 271 VAAEGFDVLKGQVAADGTAAGTTPLADIDKALKAVDTQRSVLGASQNRFESTITNLNNTV 330
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R+ DAD ++E + +S Q QQ L+ N +LSL R
Sbjct: 331 NNLTSARSRIQDADYSTEVSNMSRAQILQQAGTSVLAQANQVPQTVLSLLR 381
>gi|163802593|ref|ZP_02196485.1| flagellin [Vibrio sp. AND4]
gi|159173676|gb|EDP58495.1| flagellin [Vibrio sp. AND4]
Length = 374
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 69/183 (37%), Gaps = 3/183 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN +AM + L Q ++SG R++ A+D+AA I+ + L
Sbjct: 1 MVSLNTNITAMMTQRHLSHAAEKNIESQRNLTSGYRINSASDDAAGLQISNTLNVQTRGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
S A+ + ++ D++ +++ D +SIQ E+ LQ
Sbjct: 61 DVALRNAHDAYSVAQTAEGALHESSDILQRLRSLGLQAANGSYDSSDRQSIQHEVVALQD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +A ++F +N GS + I + + N + I + L
Sbjct: 121 EIERVAITTTFGDKNLFNGSYGSQSFHIGANANSISLTLHNMRSHIPEMGGQHYVGDALD 180
Query: 178 DSS 180
Sbjct: 181 KDW 183
Score = 87.1 bits (213), Expect = 6e-15, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 37/100 (37%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + + + ID IK + +IG +RI D + + +V + GR+
Sbjct: 274 DDIDMSTAGGAQLSIGVIDAAIKYVDSHRSEIGGFQNRISSAMDNLNTVNRSVTESKGRI 333
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D D A EST + Q Q L+ L L
Sbjct: 334 RDTDFARESTEIVRSQVLQDATTALLAQAKERPRSALGLL 373
>gi|6606501|gb|AAF19179.1|AF198617_3 FlaA [Aeromonas caviae]
Length = 306
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 70/177 (39%), Gaps = 3/177 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + + +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNMMNSTKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D +++Q E+ QL +++
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSAKDREALQKEVDQLGAEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
I+ ++F G L + A + + T+ +
Sbjct: 125 RISTATTFAGTKLLDGSFSGTFQVGADANQTIGFSLAQTGGFSISGIAKAAGTTIDI 181
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 52/137 (37%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
TT+D + + + + A + + + + +++ D ++
Sbjct: 169 SGIAKAAGTTIDIVSGPAGSVTTATGISLIFTGGSAGGISISTQSKAQAVLAAADAMLEV 228
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ ++G++ +R+ + + V R+ DAD A+E+ ++ QQ A
Sbjct: 229 VDSKRAELGAVQNRLDSTIRNQANISENVSAARSRIRDADFATETANMTKQNILQQAASS 288
Query: 435 ALSIVNNSTARILSLFR 451
L+ N LSL +
Sbjct: 289 ILAQANQRPQSALSLLQ 305
>gi|332533166|ref|ZP_08409035.1| flagellin [Pseudoalteromonas haloplanktis ANT/505]
gi|332037448|gb|EGI73902.1| flagellin [Pseudoalteromonas haloplanktis ANT/505]
Length = 322
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 3/181 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN SA++A ++L + +L+ R+SSGLR++ AAD+AA I+ ++S L+
Sbjct: 5 VNTNVSALNAQRQLTNTGNDLDTSFKRLSSGLRINSAADDAAGLQISDRLQSQILGLNQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ + + I+ D +IQ EI QL +++
Sbjct: 65 NRNANDGISLAQTAEGALDEITSTFQRIRTLSQQAANGSNTDEDRLAIQEEIRQLSAEVN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++F G+N L +S A +V + V +++ +
Sbjct: 125 RIASDTTFGGQNLLDGSYSASFQVGADAVQTIGFSMQSVGVSNNSLEANGGFTISGIAGI 184
Query: 181 T 181
Sbjct: 185 A 185
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 53/138 (38%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
V + + + + + ++ + A + + ++ + + + +D+ I
Sbjct: 185 AAAVGGKGYDVLAAGISGIDGTVAAASMSFSTVFTAGGISVSTQVKAQAVFAGMDSLIAV 244
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
++G++ +R + + + R+ DAD A+E+ L+ Q QQ +
Sbjct: 245 VDKKRAELGAVQNRFQSTIRNQANISENLSAAKSRIKDADFAAETASLTKNQILQQASQT 304
Query: 435 ALSIVNNSTARILSLFRG 452
L N LSL +G
Sbjct: 305 ILGQANQRPQAALSLLQG 322
>gi|218554508|ref|YP_002387421.1| flagellin [Escherichia coli IAI1]
gi|218361276|emb|CAQ98860.1| Flagellar filament structural protein (flagellin) [Escherichia coli
IAI1]
gi|323948196|gb|EGB44184.1| bacterial flagellin [Escherichia coli H120]
Length = 610
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 70/204 (34%), Gaps = 3/204 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSTSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + + + +
Sbjct: 124 DRVSGQTQFNGVNVLSKDGSMKIQVGANDGETITIDLKKIDSDTLNLAGFNVNGKGSVAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVL 203
+ T+ L K +
Sbjct: 184 TAATTDNLTLAGFTAGTKAADGTV 207
Score = 96.3 bits (237), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/285 (13%), Positives = 76/285 (26%)
Query: 168 YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
T + T + V + K
Sbjct: 326 GTTKAATWDNLMANTDTTGKDAYGNSAAAAVGTVIEAKGMTITSAGGNAQVLKDAAYNAA 385
Query: 228 SGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
+ A A A + T+ S S + A+ ++ + +
Sbjct: 386 YATSITTGTPGDAGAAATAGNAAVGALGATAVDNTTADVADISISASQMASILQDKDFTL 445
Query: 288 WVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT 347
+ T N ++ + T + S +
Sbjct: 446 SDGSDTYNVTSNAVTINGKAANIDDSGAITDQTSKVVNYFAHTNGSVTNDTGSTIYATED 505
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
TDA + + + +D I +G++ +R+ + + +
Sbjct: 506 GSLTTDAATKAETTADPLKALDEAISSIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQ 565
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 566 SRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 610
>gi|33590250|gb|AAQ22686.1| flagellin [Escherichia coli]
Length = 610
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/349 (13%), Positives = 97/349 (27%), Gaps = 4/349 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSTSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR-DDNGKVQITTIDYYLDPETVLLD 178
++ + FNG N L D A I + + ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLSKDGSMKIQVGANDGETITIDLKKIDSDTLNLAGFNVNGKGSVAN 183
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ + V +V A+ + K
Sbjct: 184 TAATTDNLTLAGFTTGTKAADGTVTYSKNVQFAAATASNVLAAAKDGDEITFAGNNGTGI 243
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ +A + + S A ++ T
Sbjct: 244 AATGGTYTYHKDSNSYSFSATAASKDSLLSTLAPNAGDTFTAKVTIGSKSQEVNVSKDGT 303
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT 347
+ + +T + +L D+ N
Sbjct: 304 ITSSDGKALYLDEKGNLTQTGSGTTKAATWDNLMANTDTTGKDAYGNSA 352
Score = 96.3 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 38/285 (13%), Positives = 76/285 (26%)
Query: 168 YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
T + T + V + K
Sbjct: 326 GTTKAATWDNLMANTDTTGKDAYGNSAAAAVGTVIEAKGMTITSAGGNAQVLKDAAYNAA 385
Query: 228 SGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
+ A A A + T+ S S + A+ ++ + +
Sbjct: 386 YATSITTGTPGDAGAAATAGNAAVGALGATAVDNTTADVADISISASQMASILQDKDFTL 445
Query: 288 WVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT 347
+ T N ++ + T + S +
Sbjct: 446 SDGSDTYNVTSNAVTINGKAANIDDSGAITDQTSKVVNYFAHTNGSVTNDTGSTIYATED 505
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
TDA + + + +D I +G++ +R+ + + +
Sbjct: 506 GSLTTDAATKAETTADPLKALDEAISSIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQ 565
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 566 SRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 610
>gi|30059876|gb|AAP13310.1| FliC [Escherichia coli]
Length = 613
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 70/204 (34%), Gaps = 3/204 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSTSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I + + + +
Sbjct: 124 DRVSGQTQFNGVNVLSKDGSMKIQVGANDGETITIDLKKIDSDTLNLAGFNVNGKGSVAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVL 203
+ T+ L K +
Sbjct: 184 TAATTDNLTLAGFTAGTKAADGTV 207
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/333 (13%), Positives = 95/333 (28%)
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ ++ T + + N + + ++ ++
Sbjct: 281 DTFTAKVTIGSKSQEVNVSKDGTITSSDGKALYLDEKGNLTQTGSGTTKAATWDNLMANT 340
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T G + YG V I + +A TS +A
Sbjct: 341 DTTGKDAYGNSAAAAVGTVIEAKGMTITSAGGNAQVLKDAAYNAAYATSITTGTPGDAGA 400
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A A A + T+ S S + A+ ++ + + + T N ++
Sbjct: 401 AGAAATAGNAAVGALGATAVDNTTADVADISISASQMASILQDKDFTLSDGSDTYNVTSN 460
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ T + S + TDA +
Sbjct: 461 AVTINGKAANIDDSGAITDQTSKVVNYFAHTNGSVTNDTGSTIYATEDGSLTTDAATKAE 520
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 521 TTADPLKALDEAISSIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEV 580
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ L+ N ++LSL +G
Sbjct: 581 SNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 613
>gi|310767933|gb|ADP12883.1| Flagellin [Erwinia sp. Ejp617]
Length = 280
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 56/152 (36%), Gaps = 3/152 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSG R++ + D+AA +I+ S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSMERLSSGSRITSSKDDAAGQAISNRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSGINNNLQRVRELTVQAKNGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
++ + FNG L D A
Sbjct: 124 DRVSGQTQFNGVKVLSQDSAMKIQVGANDNET 155
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 39/90 (43%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ ++ +D I +G++ +R+ + + R+ DAD A+E + +
Sbjct: 191 DPLTLLDKAIASVDKLRSGLGAVQNRLDSAVTNLNNTTTNLSSAQSRIQDADYATEVSNM 250
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFRG 452
S + QQ L+ N ++LSL +G
Sbjct: 251 SKAEIIQQAGNSVLAKANQVPQQVLSLLQG 280
>gi|189339436|gb|ABD33705.2| flagellin [Bacillus thuringiensis serovar londrina]
Length = 364
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/287 (13%), Positives = 83/287 (28%), Gaps = 3/287 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 8 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + M+ +++ +++ + ++ E L+ Q+
Sbjct: 68 ANNTQDGISLIRTADSAMNSVSNILLRMRDLANQSANGTNTSENQAALDKEFGALKEQIN 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L + + D T
Sbjct: 128 YISTNTEFNDKKLLDGSNETIAIQTLDNADEGKKIDIKLANVSTDSLKIDKLTIGGAAQK 187
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + ++ +V +
Sbjct: 188 TVDAVADKFNALKTTTTTDKAAIQTEVDAVMKEFDKVKGSMSAEDAKVITDKLKDYNDAA 247
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
A + + + + + SA N
Sbjct: 248 DTDTAKATAAKDLGAAFDKTKVNIANPNAAVAAIDSALENIASNRAT 294
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 35/361 (9%), Positives = 97/361 (26%)
Query: 91 IKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVI 150
+ +I + + ++ ++ + + ++ G N + L +T A+
Sbjct: 4 LNMRINTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESG 63
Query: 151 GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
++ +V + + + + + K+
Sbjct: 64 LGVAANNTQDGISLIRTADSAMNSVSNILLRMRDLANQSANGTNTSENQAALDKEFGALK 123
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
+ + +F + A + +
Sbjct: 124 EQINYISTNTEFNDKKLLDGSNETIAIQTLDNADEGKKIDIKLANVSTDSLKIDKLTIGG 183
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ N+ T K +I ++ KV + D + T +
Sbjct: 184 AAQKTVDAVADKFNALKTTTTTDKAAIQTEVDAVMKEFDKVKGSMSAEDAKVITDKLKDY 243
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
A V+ ID+ ++ + +G+ +R+
Sbjct: 244 NDAADTDTAKATAAKDLGAAFDKTKVNIANPNAAVAAIDSALENIASNRATLGATLNRLD 303
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ +K ++ ++ DADMA E + ++ + + + LS N + + L
Sbjct: 304 FNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLL 363
Query: 451 R 451
+
Sbjct: 364 Q 364
>gi|325508971|gb|ADZ20607.1| Flagellin [Clostridium acetobutylicum EA 2018]
Length = 320
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 69/174 (39%), Gaps = 3/174 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A ++SSGLR++ A D+ A I++ MK+ L+A
Sbjct: 45 IAHNLNAAKILYYSNINEKYFNEASLKLSSGLRINSAKDDPAGLGISERMKAQIRGLNAS 104
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ G S + A+ G+++A +++ + D SI+ E+ QL+ +++
Sbjct: 105 KRNLEDGFSMLQTAEGGLNEAENILQRMNELAVQAANGTNCSLDRNSIKDELKQLEDEVK 164
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
I+ +FNG + L + S F+ D I + T
Sbjct: 165 HISVSINFNGIDLLSASSHVTIQGGPNSSPCDFLNIDMSYFNIGRSLADIINGT 218
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 43/135 (31%)
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
L ++ +L + + + +S I I +
Sbjct: 184 VTIQGGPNSSPCDFLNIDMSYFNIGRSLADIINGTKINVDTPQNAKSSISVIQQAINSVS 243
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
+ +IGS +RI + + ++ + R+ D DMA E+ + + +
Sbjct: 244 RSRAEIGSYENRIDFRINNLENEECNLTSSYSRITDVDMAEETMEYFKYSILSKASDILM 303
Query: 437 SIVNNSTARILSLFR 451
+ ++L L +
Sbjct: 304 AQALQEPKQVLKLLQ 318
>gi|325650986|emb|CCA29942.1| flagellin [Escherichia coli]
Length = 409
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 45/373 (12%), Positives = 100/373 (26%), Gaps = 4/373 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 3 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S + + ++ +D SIQ EI ++
Sbjct: 63 AARNANDGISVAQTTEGSLSSINNNLQRVRELTVQATTGTNSQSDLDSIQDEIKSRLDEI 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR-DDNGKVQITTIDYYLDPETVLLD 178
++ + FNG N L D A I + + ++ + +
Sbjct: 123 DRVSGQTQFNGLNVLAKDGSMKIQVGANDGQTITIDLKKIDSSTLKLTGFNVNGSGSVAN 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ E + + F + +
Sbjct: 183 TAATKDELAAAAAAAGTTPAVGTDGVTKYTVDAGLNKATAANVFANLADGAVVDASISNG 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
F A + + + + + AA +++ D + + +
Sbjct: 243 FGAAAATDYTYNKATNDFTFNASIAAGAAAGDSNSAALQSFLTPKAGDTANLSVKIGTTS 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
D + + + L + + + A
Sbjct: 303 VDVVLASDGKITAKDGSALYIDSTGNLTQNSAGTVTAATLDGLTKNHDATGAVGVDITTA 362
Query: 359 LAMEEMVSFIDTQ 371
++
Sbjct: 363 DGATISLAGSANA 375
>gi|169950598|gb|ACB05828.1| flagellin [Clostridium botulinum]
Length = 275
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A ++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHGQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA + FN ++ + + ++
Sbjct: 123 RIASQTQFNTKSLINGAVSEDAKAMT 148
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 49/133 (36%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D ++ T + + I + + N + + + ++ ID+ I +
Sbjct: 143 DAKAMTFQIGANSGQTIKLTIGSMDAKTLKVDNIKLDDTAANITKQIATIDSAINSVSKE 202
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 203 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 262
Query: 439 VNNSTARILSLFR 451
N + +L L R
Sbjct: 263 ANQAPQGVLQLLR 275
>gi|312793858|ref|YP_004026781.1| flagellin domain-containing protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180998|gb|ADQ41168.1| flagellin domain protein [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 273
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 63/138 (45%), Gaps = 3/138 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++ +L N L +++SSG+R++ A D+AA +I++ M+ L+
Sbjct: 3 INNNIQALNTYNRLTINNDALSKSLEKLSSGMRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ D ++Q+E+ QL +++
Sbjct: 63 QRNAQDGISLIQTAEGALNETHSILQRMRELAVQAANDTNTADDRNALQAEVDQLIAEIN 122
Query: 121 DIARGSSFNGENWLRTDL 138
IA + FN + L
Sbjct: 123 RIASTTEFNTQKLLNGGA 140
Score = 106 bits (263), Expect = 9e-21, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 44/137 (32%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + + + + T + + + +S ID IK
Sbjct: 137 NGGAMANTGVKFHVGANINQNITLTIAKSDAQTLGVSGLKIASQASANAAISTIDNAIKA 196
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ K+G+ +R+ + + + + R+ D DMA E + Q A
Sbjct: 197 VSTRRAKLGAYQNRLEHTINNLGTAAENLTVAESRIRDVDMAREMMAYTKNNILMQAATA 256
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +L L R
Sbjct: 257 MLAQANQVPQAVLQLLR 273
>gi|256376480|ref|YP_003100140.1| flagellin domain protein [Actinosynnema mirum DSM 43827]
gi|255920783|gb|ACU36294.1| flagellin domain protein [Actinosynnema mirum DSM 43827]
Length = 386
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +N +AM+A + L + + +++SSGLR++ AAD+AA SI+Q + S G L
Sbjct: 5 INSNIAAMNAYRNLSVNDKQMAGSLEKLSSGLRINRAADDAAGLSISQGLTSQIGGLKVA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE----RGTDSKSIQSEITQLQSQL 119
+ G + V A ++++ +++ +++ + Q+E QLQ +L
Sbjct: 65 ARNAQDGVNVVQTADGALNESAEILQRMRDLAVQASNGGSQDTNARAAAQTEFGQLQKEL 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTAS 144
IA+ +SF G+ L T + +
Sbjct: 125 DRIAKTTSFGGQKLLDTAGTAYNGT 149
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 44/348 (12%), Positives = 89/348 (25%)
Query: 104 DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
+ + + + L G N TA A + ++
Sbjct: 39 NRAADDAAGLSISQGLTSQIGGLKVAARNAQDGVNVVQTADGALNESAEILQRMRDLAVQ 98
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
+ D + G + L Q L D + Y+ + +
Sbjct: 99 ASNGGSQDTNARAAAQTEFGQLQKELDRIAKTTSFGGQKLLDTAGTAYNGTFQVGANNTA 158
Query: 224 LATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMG 283
+ K T+ + T + + + AT +
Sbjct: 159 DDQIQVNLDATVFGSSGGTKSSYTVSGGTYDSATLDTKTITATQGATTATVTLATPADLD 218
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
+ A S + T+ T +G +
Sbjct: 219 AVVSQLNADATFSGGFTASKDGGELKIESKTNGTGAVTLTGTSGLTGAGTNGTAGATGFD 278
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
T + + + ID+ IK + A ++G+ +R + I + + +
Sbjct: 279 SAGLGVGTTVKVDTTANAQSAIDSIDSAIKGLSTARAQLGAYQNRFEHTINNINVQVENL 338
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D DMA E + + Q Q L+ N + +L L R
Sbjct: 339 SASKSNITDTDMAQEMVKFTRSQILSQAGTAMLAQANQAPQNVLQLLR 386
>gi|332161355|ref|YP_004297932.1| flagellin [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
gi|259045867|gb|ACV91382.1| FliC [Yersinia enterocolitica]
gi|318605279|emb|CBY26777.1| flagellar biosynthesis protein FliC [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325665585|gb|ADZ42229.1| flagellin [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
gi|330859516|emb|CBX69859.1| flagellin [Yersinia enterocolitica W22703]
Length = 369
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 70/209 (33%), Gaps = 3/209 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + +
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTKTDSSYDFQVGSKDNEQISIAIGASSGWNLATANADGTS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + +
Sbjct: 181 SDTVNTYAFTKKAALDTAQTDYDTANTAY 209
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 46/358 (12%), Positives = 98/358 (27%)
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+ + S E ++ ++ T + A++
Sbjct: 12 LTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGLTVAARNANDGI 71
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ + I+ L L + + + +D + + D
Sbjct: 72 SLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRMEEINRVTKQTDF 131
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+G +S + + + I A A T+S T + + +
Sbjct: 132 NGIKVLDNRTKTDSSYDFQVGSKDNEQISIAIGASSGWNLATANADGTSSDTVNTYAFTK 191
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
A+ + + G T + AK + D+
Sbjct: 192 KAALDTAQTDYDTANTAYLKAVKDDAANGTTTAAAAKTTLDGKNTALATAVKDATAVNEA 251
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
++ T A + K ++ ID +K +G+ +R
Sbjct: 252 VNGKARTVAAKGFDVLNGTVAADGKATGTTPLADIDKALKAVDTQRSVLGASQNRFESTI 311
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + R+ DAD ++E + +S Q QQ L+ N +LSL R
Sbjct: 312 TNLNNTVNNLTSARSRIQDADYSTEVSNMSRAQILQQAGTSVLAQANQVPQTVLSLLR 369
>gi|189170134|gb|ACD80092.1| flagellin [Clostridium botulinum]
Length = 275
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS +
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSGIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I+ + FN ++ + + ++
Sbjct: 123 RISSQTQFNTKSLINGAVSEDAKAMT 148
Score = 86.7 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 47/133 (35%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D ++ T + + I + + + + + ++ ID I +
Sbjct: 143 DAKAMTFQIGANSGQTIKLTIGSMDAKTLKVDKIKLDDTAANVTKQIATIDNAINSVSKE 202
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 203 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 262
Query: 439 VNNSTARILSLFR 451
N + +L L R
Sbjct: 263 ANQAPQGVLQLLR 275
>gi|3928920|gb|AAC79723.1| flagellin FliC [endosymbiont of Riftia pachyptila]
Length = 281
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 42/255 (16%), Positives = 82/255 (32%), Gaps = 1/255 (0%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ TN +++A + L +L R+SSGLRV+ A D+AA + M +D L+
Sbjct: 3 LVVNTNVMSLNAQRNLSSTQNDLAKSLQRLSSGLRVNSAKDDAAGLYQIEKMTADIRGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG-TDSKSIQSEITQLQSQLR 120
+ G S A+ + + + + I+ D +Q E+ QL ++
Sbjct: 63 QATRNAADGISLGQTAEGALGQIANNLQRIREIAVQSSNATVEDRTGLQKEVDQLTQEIS 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + S FNG + L S + + T ++ S
Sbjct: 123 RIVQTSEFNGTSLLSATASMSFQVGQDGKASHQVSAKTIDLTSLNAYASSLTATGTINVS 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ L + I+ + + + L+ + + + D
Sbjct: 183 SASAASAELSTASTGIENDITSVAQNRATFGAVQNRFEAVISNLSNYAENLTASRSRIQD 242
Query: 241 QAKGIATIPVPLPAA 255
T +
Sbjct: 243 ADFAAETAALTKTQI 257
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 34/86 (39%)
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ I+ I G++ +R + + + R+ DAD A+E+ L+
Sbjct: 196 TGIENDITSVAQNRATFGAVQNRFEAVISNLSNYAENLTASRSRIQDADFAAETAALTKT 255
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ V LS N L+L +
Sbjct: 256 QILQQAGVSILSQANVVPQSALALLQ 281
>gi|189339433|gb|ABD33704.3| flagellin [Bacillus thuringiensis serovar morrisoni]
Length = 406
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 78/198 (39%), Gaps = 3/198 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 36 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 95
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + ++ +++ +++ G + K++ E + L+ Q+
Sbjct: 96 ANNTQDGMSLIRTADSALNSVSNILLRMRDIANQSANGTNTGDNQKALDKEFSALKEQID 155
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L D S + + + N T
Sbjct: 156 YISKNTEFNDKKLLNGDNKSIAIQTLDNADTAKQININLADSSTKALNIDTLSIAGTTDK 215
Query: 181 TDGTERYGLLDRNHKIKV 198
T L D +
Sbjct: 216 TITITAKDLTDNKATLDA 233
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 46/134 (34%)
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
D + + + + + T D + ID ++ +
Sbjct: 273 SDKAIEGITDKMTAFDGTHTAAAAIGTAYTEPTAGDITKSAPNASGAIKSIDAALETIAS 332
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G+ +R+ + +K ++ ++ DADMA E + ++ + + + LS
Sbjct: 333 NRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGISMLS 392
Query: 438 IVNNSTARILSLFR 451
N + + L +
Sbjct: 393 QANQTPQMVSKLLQ 406
>gi|326319104|ref|YP_004236776.1| flagellar hook-associated protein 3 [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323375940|gb|ADX48209.1| flagellar hook-associated protein 3 [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 428
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 67/442 (15%), Positives = 127/442 (28%), Gaps = 35/442 (7%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+A + L L +Q+ ++SG RV A+D+ + A+ + + + A+
Sbjct: 15 NALRNLSQRQTALSNLQENLTSGKRVVRASDDPVAAAQAERAITRISRVQSEQRALENAR 74
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSF 128
+ V A++ + +A+D++ ++ I + D K+I +++ L+ QL D+
Sbjct: 75 NTVTQAESTLGQAVDIVQELRQLIVSAGGGTLKPEDRKTIMNQVQGLREQLSDMVNRKDT 134
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
NG L + + Q + L + +R G
Sbjct: 135 NGLPLLGALGSALAPFLGPQSGSPDYSFAGLPGQASGSATSLPMSLDGESAFMFQPKRDG 194
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
+ + ++L V D S + + G A T T
Sbjct: 195 VYTASVSNIPTGRLLTTDGVKAGDTSLITGDDYQIVFSGVGPGATAGTTTATYTITNMTT 254
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
V + + I
Sbjct: 255 GVASAPVTVPDFPADKPVSIAVTGIPGVSFNITGT------------------------- 289
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ S L S+ T+ A+ + ++ I
Sbjct: 290 --PTKQNDGTYNFSPANGDTISLKPSASIFSSIDQAVRDIGGATNGNAAAQAVGQALNNI 347
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D ++ G G + +R D +E R D DM + QT
Sbjct: 348 DIGLERIQNMRGYAGELLNRADRITGDQDKRADQLEADRSRAEDLDMIKGISDFQNNQTG 407
Query: 429 QQLAVQALSIVNNSTARILSLF 450
Q A+Q+ + V LSLF
Sbjct: 408 YQAALQSYAQVQK-----LSLF 424
>gi|229916645|ref|YP_002885291.1| flagellin domain protein [Exiguobacterium sp. AT1b]
gi|229468074|gb|ACQ69846.1| flagellin domain protein [Exiguobacterium sp. AT1b]
Length = 274
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 39/255 (15%), Positives = 81/255 (31%), Gaps = 3/255 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + N +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNLNAMNAHRNMSFNTSNAGKAMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D ++ E L S++
Sbjct: 63 SRNAQDGISLIQTAEGALNETHSILQRMRELSVQSASDTNIANDRTALNDEFQALISEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + + D + A + D + +
Sbjct: 123 RIATETEFNQQKVISADFTADIQVGANKDQKITLTWKAQTKAALGEDAVNISALKIDTKA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + + + + + + ++T L A
Sbjct: 183 DASTAIETVNNAIESVSKSRSAMGALQNRLEHTINNLNTSAENLQAAESRVRDVDMAKEM 242
Query: 241 QAKGIATIPVPLPAA 255
I A
Sbjct: 243 MNFTKNNILNQASQA 257
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 16/145 (11%), Positives = 47/145 (32%)
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ + + + + + + + + + K +
Sbjct: 130 FNQQKVISADFTADIQVGANKDQKITLTWKAQTKAALGEDAVNISALKIDTKADASTAIE 189
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
++ I+ + + +G++ +R+ + + + ++ R+ D DMA E +
Sbjct: 190 TVNNAIESVSKSRSAMGALQNRLEHTINNLNTSAENLQAAESRVRDVDMAKEMMNFTKNN 249
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
Q + L+ N +L L R
Sbjct: 250 ILNQASQAMLAQANQQPQAVLQLLR 274
>gi|87242474|gb|ABD33776.1| flagellin [Bacillus thuringiensis serovar higo]
Length = 364
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 40/205 (19%), Positives = 86/205 (41%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++ + +R + DR+SSG R+++A+D+AA +IA M++ L+
Sbjct: 1 INTNINSLRTQEYMRQNQSKMSNSMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVA 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G + A + M+ +++ +++ ++ ++Q E +LQ Q+
Sbjct: 61 ANNTQDGMPLIRTADSAMNSVSNILLRMRDIANQSANGTNTDSNKSALQKEFDELQKQIT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L+ D ++ S I + V + + + +
Sbjct: 121 YIADNTQFNDKNLLKEDSEVKIQTLDSSSSEQQIGINLKAVTLEKLGIDKISIGAVAGAG 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ D + K + KD
Sbjct: 181 AGAGTKIEQKDIDAVTKGIADLTKD 205
Score = 89.8 bits (220), Expect = 9e-16, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
EK E V ID + +G+ +R+ + +K ++ ++ DAD
Sbjct: 270 AAEKDNALEAVKAIDKALTTVADNRATLGATLNRLDFNVNNLKSQSASMASAASQIEDAD 329
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
MA E + ++ + + + LS N + + L
Sbjct: 330 MAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKL 364
>gi|310659646|ref|YP_003937367.1| hag [Clostridium sticklandii DSM 519]
gi|308826424|emb|CBH22462.1| Hag [Clostridium sticklandii]
Length = 272
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 34/251 (13%), Positives = 80/251 (31%), Gaps = 3/251 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N AM++ + + + +++SSG++++ A D+AA SI++ M+ L+
Sbjct: 3 INHNMMAMNSHRSGGVNSAGMGKSIEKLSSGMKINRAGDDAAGLSISEKMRGQIRGLNMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ + + ++ ++ D SI+ E+ QL +++
Sbjct: 63 SKNAQDGISLIQTAEGALDEVHAMLQRMRELAVQAANDTNVTIDRTSIKDELDQLSAEIE 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L I + + + + ++
Sbjct: 123 AISGRAEFNTQKLLDGTFTGKKFHIGANDTQTIDVEIGTMTAASLGVTAASIAVTTATTA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + S + + A + A
Sbjct: 183 GKTVTQVNDAITKVSSQRSKLGAIQNRLEHTIKNLDNSAENLQAAESRLRDTDMAKEMSS 242
Query: 241 QAKGIATIPVP 251
K
Sbjct: 243 FTKSNILAQAS 253
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/261 (10%), Positives = 63/261 (24%)
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + K I+ + + S
Sbjct: 1 MIINHNMMAMNSHRSGGVNSAGMGKSIEKLSSGMKINRAGDDAAGLSISEKMRGQIRGLN 60
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+K + A A + +A + ++
Sbjct: 61 MASKNAQDGISLIQTAEGALDEVHAMLQRMRELAVQAANDTNVTIDRTSIKDELDQLSAE 120
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ T D +M ++ A + A
Sbjct: 121 IEAISGRAEFNTQKLLDGTFTGKKFHIGANDTQTIDVEIGTMTAASLGVTAASIAVTTAT 180
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ V+ ++ I ++ K+G+I +R+ + + ++ RL D DMA E
Sbjct: 181 TAGKTVTQVNDAITKVSSQRSKLGAIQNRLEHTIKNLDNSAENLQAAESRLRDTDMAKEM 240
Query: 420 TRLSALQTQQQLAVQALSIVN 440
+ + Q + L+ N
Sbjct: 241 SSFTKSNILAQASQAMLAQAN 261
>gi|254246747|ref|ZP_04940068.1| Flagellin [Burkholderia cenocepacia PC184]
gi|124871523|gb|EAY63239.1| Flagellin [Burkholderia cenocepacia PC184]
Length = 425
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 43/227 (18%), Positives = 83/227 (36%), Gaps = 3/227 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +I+ M++ L
Sbjct: 42 MLGINSNINSLVAQQNLNGSQNALSQAITRLSSGKRINSAADDAAGLAISTRMQTQINGL 101
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ G S + A + +S + + I+ TD ++Q E+ Q
Sbjct: 102 NQGVSNANDGVSMIQTASSALSSLTNSLQRIRQLAVQASTGTMSTTDQAALQQEVAQQIQ 161
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG N L G + + +V + D + + I L + +
Sbjct: 162 EVNRIASQTTYNGTNILDGSAGIVSFQVGANVGQTISLDLSQSMSAAKIGGGLVQKGQTV 221
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
+ T + + + Y +
Sbjct: 222 GTVTGLSLDNTGAYTGSGAAITAINVISDGKGGYTFTDQNGQGISAT 268
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/386 (10%), Positives = 106/386 (27%), Gaps = 10/386 (2%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ ++ ++ +S+AI +S+ K + D + + T++Q+Q+ + +G
Sbjct: 50 NSLVAQQNLNGSQNALSQAITRLSSGK-----RINSAADDAAGLAISTRMQTQINGLNQG 104
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + SS S + + + + +
Sbjct: 105 VSNANDGVSMIQTASSALSSLTNSLQRIRQLAVQAST-----GTMSTTDQAALQQEVAQQ 159
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
+ + + D + + + S + A KG
Sbjct: 160 IQEVNRIASQTTYNGTNILDGSAGIVSFQVGANVGQTISLDLSQSMSAAKIGGGLVQKGQ 219
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
V + T + + +V + + +
Sbjct: 220 TVGTVTGLSLDNTGAYTGSGAAITAINVISDGKGGYTFTDQNGQGISATAATNVFGAGAT 279
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + + ++ + +N + + + +
Sbjct: 280 AGTGTPVAALALGTGVTGAGTTAAQQTAITNAIAQINAVNNPKTVSGLDISTVSGANVAM 339
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID ++ +G+ +R + + ++ DA+ A E+ +S
Sbjct: 340 VSIDNALQTVNNVQAALGAAQNRFTAISTAQQAESTDLSSAQSQITDANFAQETANMSKN 399
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ + L+ N+ ++L L +
Sbjct: 400 QVLQQAGISVLAQANSLPQQVLKLLQ 425
>gi|284810838|gb|ADB96216.1| FliC3* [Yersinia enterocolitica]
gi|284810842|gb|ADB96219.1| FliC3* [Yersinia enterocolitica]
Length = 369
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 72/209 (34%), Gaps = 3/209 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + + +
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTATDSSYDFQVGSKDNEQISIAIGKSSGWNLATANADGTS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
S + + K
Sbjct: 181 SDSVNTYAFTKTTVLDTKQAAYDTANGAY 209
Score = 93.7 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 43/358 (12%), Positives = 96/358 (26%)
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+ + S E ++ ++ T + A++
Sbjct: 12 LTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGLTVAARNANDGI 71
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ + I+ L L + + + +D + + D
Sbjct: 72 SLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRMEEINRVTKQTDF 131
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+G +S + + + I A A T+S + + + +
Sbjct: 132 NGIKVLDNRTATDSSYDFQVGSKDNEQISIAIGKSSGWNLATANADGTSSDSVNTYAFTK 191
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ + G T + K + + D+
Sbjct: 192 TTVLDTKQAAYDTANGAYLAAVKADAANGGTTAAALKGAADTATTELATAVKDATAVNEA 251
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
++ T A + K ++ ID +K +G+ +R
Sbjct: 252 VNGKSRTVAAKGFDVLNGTVAADGKATGTTPLADIDKALKAVDTQRSVLGASQNRFESTI 311
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + R+ DAD ++E + +S Q QQ L+ N +LSL R
Sbjct: 312 TNLNNTVNNLTSARSRIQDADYSTEVSNMSRAQILQQAGTSVLAQANQVPQTVLSLLR 369
>gi|114054856|gb|ABI50028.1| FlaA [Clostridium botulinum]
Length = 279
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNARRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I+ + FN ++ + + ++
Sbjct: 123 RISSQTQFNTKSLINGAVSXDAXAMT 148
Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 44/136 (32%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
D + T + + I + + + + ++ ID I
Sbjct: 139 AVSXDAXAMTFQIGANSGQTIKLTIGSMDAKTLXVDXIKLDDTAANVTKQIATIDNAINS 198
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ K+G+ +R+ + + ++ R+ D DMA E + Q A
Sbjct: 199 VSKERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQA 258
Query: 435 ALSIVNNSTARILSLF 450
L+ N + +L L
Sbjct: 259 MLAQANQAPQGVLQLL 274
>gi|123442751|ref|YP_001006728.1| flagellin [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|122089712|emb|CAL12564.1| flagellin [Yersinia enterocolitica subsp. enterocolitica 8081]
Length = 381
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 39/260 (15%), Positives = 80/260 (30%), Gaps = 3/260 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + + +
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTATDSSYDFQVGSKDNEQISIAIGASSGWNLAAAGAGGIS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + + D+ V ++ +
Sbjct: 181 GDTINTYKFTTTTALKTAQDNVKTATDDVPVKQKAYEDAVAADPADAGNAALKTAWDTAK 240
Query: 238 TFDQAKGIATIPVPLPAAPA 257
T A A
Sbjct: 241 TLVTTNTGLYNTALKTATTA 260
Score = 95.6 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/351 (12%), Positives = 95/351 (27%), Gaps = 1/351 (0%)
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
+ + Q+ + + G S + A+ +G +
Sbjct: 32 SSGLRINSAKDDAAGQAIANRFTSNINGLTVAARNANDGISLSQTAEGALGEINNNLQRV 91
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+T +DS + + + +K +D S
Sbjct: 92 RDLTVQAQNSSNSASDIDSIQSEVNQRMEEINRVTKQTDFNGIKVLDNRTATDSSYDFQV 151
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
K + A++ A G I TT+ + + A +
Sbjct: 152 GSKDNEQISIAIGASSGWNLAAAGAGGISGDTINTYKFTTTTALKTAQDNVKTATDDVPV 211
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+ + V A ++ + T + T+ + + + ++
Sbjct: 212 KQKAYEDAVAADPADAGNAALKTAWDTAKTLVTTNTGLYNTALKTATTAGEAVNGNARTV 271
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
A ++ ID +K +G+ +R +
Sbjct: 272 AAEGFDVLKGQVAADGTAAGT-TPLADIDKALKAVDTQRSVLGASQNRFESTITNLNNTV 330
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R+ DAD ++E + +S Q QQ L+ N +LSL R
Sbjct: 331 NNLTSARSRIQDADYSTEVSNMSRAQILQQAGTSVLAQANQVPQTVLSLLR 381
>gi|86157768|ref|YP_464553.1| flagellin-like [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774279|gb|ABC81116.1| flagellin-like protein [Anaeromyxobacter dehalogenans 2CP-C]
Length = 278
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN ++++A + + + L+ R+SSG R++ A D+AA I+ +++ + +
Sbjct: 3 LSIRTNIASLNAQRNMSNTQNTLDSSMSRLSSGYRITKAGDDAAGLGISTKLEAQIRSYN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQ 118
G S + ++A +++ ++++ ++ G + +Q+E QL +
Sbjct: 63 QAVRNANDGLSVIQTSEAALNETSNILTRLRELAMQAASDGIGDKERAYVQAEADQLTDE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIA 146
+ IA + +NG L S +
Sbjct: 123 IDRIANVTKYNGTALLAGTATSLNFQVG 150
Score = 99.4 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 41/96 (42%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +S ID I+ + +G++ +R + I+ +A+ R+ D D
Sbjct: 182 FTTGTTARDALSSIDAAIETVSKNRADLGAVGNRFQSAINNIQSFSEALSAANSRIRDVD 241
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+A E++RL+ QQ V L+ N L L
Sbjct: 242 VAEETSRLARANILQQAGVSVLAQANQMPQLALKLL 277
>gi|331269289|ref|YP_004395781.1| flagellin domain-containing protein [Clostridium botulinum
BKT015925]
gi|329125839|gb|AEB75784.1| flagellin domain protein [Clostridium botulinum BKT015925]
Length = 257
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 57/141 (40%), Gaps = 3/141 (2%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDI 76
+ +++SSGLR++ A D+AA +I++ M+ L+ S G S +
Sbjct: 2 MGANINGAGKAMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQASRNAQDGISLIQT 61
Query: 77 AKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
+ +++ ++ ++ D ++Q+E+ QL +L I+ + FN +
Sbjct: 62 TEGALNETHAILQRMRELAVQTANDTNTDKDRTNVQAEVKQLIGELDRISSQTEFNTKKL 121
Query: 134 LRTDLGSSTASIAKSVIGSFI 154
L I + +
Sbjct: 122 LDGTASKVNFQIGANKDQNIQ 142
Score = 87.5 bits (214), Expect = 5e-15, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 36/95 (37%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ +D I +A +G++ +R+ + + ++ R+ D DMA
Sbjct: 163 SAKVCSAAIEKLDAAINKVSAERANLGAVQNRLEHTINSDNNASENLQAAESRIRDVDMA 222
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + S QQ A L+ N +L L R
Sbjct: 223 KEMMQFSKKNILQQAAQAMLAQANQQPQGVLQLLR 257
>gi|114054807|gb|ABI50004.1| FlaA [Clostridium botulinum]
Length = 271
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 1 INHNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 61 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I+ + FN ++ + + + ++
Sbjct: 121 RISSQTQFNTKSLINGAVSKTADAMT 146
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 46/131 (35%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
++ T + + I + + N + + + ++ ID I +
Sbjct: 141 TADAMTFQIGANSGQTIKLTIGSMDAKTLKVDNIKLDDTAANVTKQIATIDNAINSVSKE 200
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 201 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 260
Query: 439 VNNSTARILSL 449
N + +L L
Sbjct: 261 ANQAPQGVLQL 271
>gi|110227190|gb|ABG56544.1| FlaB [Aeromonas hydrophila]
Length = 301
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 74/205 (36%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNTSSLNAQRNLMNTTKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D +++Q E+ QL S++
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLSQQSANGSNSAKDREALQKEVDQLGSEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+R ++F G L A + D + V + +
Sbjct: 125 RISRDTTFAGTKLLDGTYTGVFQVGADAQQTISFGLDQSMGFSISGIAKAAGTAVDMGTV 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 185 IGSALDVTAIFASGSAGGISISTQS 209
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 26/236 (11%), Positives = 70/236 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ LA T+ + + + ++ + +
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLSQQSANGSNSAKDREALQKEVDQLGSEIN 124
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + + T + + + + + + D+
Sbjct: 125 RISRDTTFAGTKLLDGTYTGVFQVGADAQQTISFGLDQSMGFSISGIAKAAGTAVDMGTV 184
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
I S + + + A + + + + +++ D + ++G++ +R+
Sbjct: 185 IGSALDVTAIFASGSAGGISISTQSGAQNVLAAADLMLAVVDGKRAELGAVQNRLDSTIR 244
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + V R+ DAD A+E+ ++ QQ A L+ N LSL
Sbjct: 245 NQANISENVSAARSRIRDADFATETANMTKQNILQQAASSILAQANQRPQSALSLL 300
>gi|189164093|gb|ABU96036.2| flagellin [Bacillus thuringiensis serovar kenyae]
Length = 367
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M+S G L+
Sbjct: 3 INTNINSMRTQEYMRQNQAKMSNSMDRLSSGKRINNASDDAAGLAIATRMRSREGGLNVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S + A + ++ +++ +++ + ++Q E QL+ Q++
Sbjct: 63 ARNTEDGMSLIRTADSALNSVSNILLRMRDLANQSASGTNTDKNQAAMQKEFDQLKEQIQ 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGS 152
IA + FN + L + S +
Sbjct: 123 YIADNTEFNDKKLLDGSNSTINIQTLDSHDKN 154
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 30/308 (9%), Positives = 85/308 (27%)
Query: 144 SIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
++A + + L + + + + +
Sbjct: 60 NVAARNTEDGMSLIRTADSALNSVSNILLRMRDLANQSASGTNTDKNQAAMQKEFDQLKE 119
Query: 204 KDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTS 263
+ ++ +T + L + + + + + ++
Sbjct: 120 QIQYIADNTEFNDKKLLDGSNSTINIQTLDSHDKNKQITISLDSASLKNLDIKDLAIGSA 179
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
+ + + S + +D V A + S ++
Sbjct: 180 TINQTDLDTATNSMKRLATPVTDGKVLAQDIADAKAAFNKVQSAYTPAEVDKIQDAFKAY 239
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+ K+ D + +N K V ID I+ ++ +G
Sbjct: 240 DKLAADPASKDTDIADAAKNVNTVFGTLATPTATKFDPSSAVEKIDKAIETIASSRATLG 299
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
+ +R+ +K +++ ++ DADMA E + ++ + + + LS N +
Sbjct: 300 ATLNRLDFNVTNLKSQENSMAASASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTP 359
Query: 444 ARILSLFR 451
+ L +
Sbjct: 360 QMVSKLLQ 367
>gi|155965928|gb|ABU40946.1| periplasmic flagellar core protein [Leptospira interrogans serovar
Grippotyphosa]
Length = 283
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 31/255 (12%), Positives = 79/255 (30%), Gaps = 3/255 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + L+ ++ +SSG+R + +AD+A+ ++++ +++ L
Sbjct: 3 INHNLSAVNAHRSLKFNELAVDKTMKALSSGMRSNSSADDASGLAVSEKLRTQVNGLRQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + A+ + + +++ I+ D + +Q E++ L ++
Sbjct: 63 ERNTEDGMSFIQTAEGFLEQTSNIIQRIRVLAIQTSNGIYSNEDRRLVQVEVSALVDEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + + ++ + I T+
Sbjct: 123 RIASQAEFNKFKLSEGRFARGSRLASMWFHMGPNQNQRERFYIGTMTSKALKLVKADGRP 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ D + + + L + + D
Sbjct: 183 IAISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRD 242
Query: 241 QAKGIATIPVPLPAA 255
+ +
Sbjct: 243 ADMAEEVVSLTTKQI 257
Score = 99.8 bits (246), Expect = 9e-19, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ D + +G+ +R+ + + ++ R+ DAD
Sbjct: 185 ISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDAD 244
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E L+ Q Q L+ N +L L +
Sbjct: 245 MAEEVVSLTTKQILVQSGTAMLARANMKPNSVLKLLQ 281
>gi|326370519|gb|ADZ56326.1| flagellin [Pseudomonas aeruginosa]
Length = 161
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + + +L R+S+G R++ A D+AA IA + S L+
Sbjct: 3 LTVNTNIASLNTQRNLNNSSASLNTSLQRLSTGSRINSAKDDAAGLQIANRLTSQVNGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S A+ + ++ +++ +++ ++ ++ E+ QLQ +
Sbjct: 63 VATKNANDGISLAQTAEGALQQSTNILQRMRDLSLQSANGSNSDSERTALNGEVKQLQKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAK 147
L I+ ++F G L G ++ +
Sbjct: 123 LDRISNTTTFGGRKLLDGSFGVASFQVGS 151
>gi|170791585|gb|ACB38434.1| flagellin A [Aeromonas salmonicida subsp. salmonicida]
gi|170791587|gb|ACB38435.1| flagellin A [Aeromonas salmonicida subsp. salmonicida]
Length = 305
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 77/199 (38%), Gaps = 3/199 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + N +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNLMNTNKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E TQL +++
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYTQLMTEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A+ ++F G+N L S A + R +V + ++
Sbjct: 125 RVAKDTTFGGQNLLSGGYVGSFQVGADAGQTITFRMTTAFTISGMASATSGSASVTVSTA 184
Query: 181 TDGTERYGLLDRNHKIKVE 199
G +
Sbjct: 185 ATGEPYTINKTAGTPVTST 203
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
T + + + + + + + ++ +D IK
Sbjct: 168 GMASATSGSASVTVSTAATGEPYTINKTAGTPVTSTSMSSIQAASSAQSAMANLDYMIKV 227
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ ++G++ +R + + V R+ DAD A+E+ L+ QQ A
Sbjct: 228 VDSKRAELGAVQNRFDSTIRNQANISENVSAARSRIRDADFATETANLTKQNILQQAAST 287
Query: 435 ALSIVNNSTARILSLFRG 452
LS N LSL +G
Sbjct: 288 ILSQANQRPQSALSLLQG 305
>gi|328948252|ref|YP_004365589.1| flagellin domain protein [Treponema succinifaciens DSM 2489]
gi|328448576|gb|AEB14292.1| flagellin domain protein [Treponema succinifaciens DSM 2489]
Length = 286
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 77/201 (38%), Gaps = 3/201 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N SAM +++ L +L +++SSG +++ A D+A+ ++++ M+S L+
Sbjct: 2 VINHNMSAMFSNRSLGVTQGSLTKDMEKLSSGQKINRAGDDASGLAVSEKMRSQIRGLNQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
S G S + + + + D++ I+ D IQ E++QL +++
Sbjct: 62 ASRNAANGISFIQTTEGYLQETTDIVQRIRELAVQASNGIYSDEDRMQIQVEVSQLVAEV 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FNG N L +T + N +++ + + +
Sbjct: 122 DRIASQAQFNGMNMLTGRFAQATGENTPTASMWLHIGANMDQRMSVFIGTMTAAALGMRE 181
Query: 180 STDGTERYGLLDRNHKIKVEP 200
+ +
Sbjct: 182 IGTEEVMTIAAPSDANRAIGT 202
Score = 99.8 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 36/99 (36%)
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
+ +D +K +G+ +R+ + + + + R+ D
Sbjct: 188 MTIAAPSDANRAIGTLDEALKIINKQRADLGAYQNRLDYAVKGLDIAAENTQASESRIRD 247
Query: 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DMAS + Q Q + L+ N+ + +LSL +
Sbjct: 248 TDMASAMVEFTKNQVLSQSGIAMLAQANSQSQSVLSLLQ 286
>gi|123442752|ref|YP_001006729.1| flagellin [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|122089713|emb|CAL12565.1| thermoregulated motility protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 366
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 70/209 (33%), Gaps = 3/209 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + +
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTKTDSSYDFQVGSKDNEQISIAIGASSGWNLATANADGTS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + +
Sbjct: 181 SDTVNTYAFTKKAALDTAQTDYDTANTAY 209
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/364 (12%), Positives = 93/364 (25%)
Query: 88 MSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
+ + S+S + S I + S+ +
Sbjct: 3 VINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGLTV 62
Query: 148 SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
+ + + + + + D + I+ E +
Sbjct: 63 AARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRMEEI 122
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
V + K T + + + D + I A N +S
Sbjct: 123 NRVTKQTDFNGIKVLDNRTKTDSSYDFQVGSKDNEQISIAIGASSGWNLATANADGTSSD 182
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
+ + + +D T + + T K + D+
Sbjct: 183 TVNTYAFTKKAALDTAQTDYDTANTAYLAAVKSGVAGDITTTKATLDGKNTALATAVKDA 242
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
++ T A + K ++ ID +K +G+ +
Sbjct: 243 TAVNEAVNGKVRTVAAKGFDVLNGTVAADGKATGTTPLADIDKALKAVDTQRSVLGASQN 302
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
R + + + R+ DAD ++E + +S Q QQ L+ N +L
Sbjct: 303 RFESTITNLNNTVNNLTSARSRIQDADYSTEVSNMSRAQILQQAGTSVLAQANQVPQTVL 362
Query: 448 SLFR 451
SL R
Sbjct: 363 SLLR 366
>gi|15639853|ref|NP_219303.1| flagellar filament 34.5 kDa core protein (flaB1) [Treponema
pallidum subsp. pallidum str. Nichols]
gi|2506430|sp|P21990|FLAB1_TREPA RecName: Full=Flagellar filament 34.5 kDa core protein; AltName:
Full=Class B
gi|48223|emb|CAA45381.1| flaB1 [Treponema pallidum]
gi|3323183|gb|AAC65834.1| flagellar filament 34.5 kDa core protein (flaB1) [Treponema
pallidum subsp. pallidum str. Nichols]
gi|291060228|gb|ADD72963.1| flagellin [Treponema pallidum subsp. pallidum str. Chicago]
Length = 286
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 79/203 (38%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM A + L N + +++SSG R++ A D+A+ ++++ M+S L+
Sbjct: 3 INHNMSAMFAQRTLGHTNVQVGKGIEKLSSGYRINRAGDDASGLAVSEKMRSQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S G + + + +A + + D+M I+ D IQ E++QL +++
Sbjct: 63 STNASNGVNFIQVTEAYLQETTDIMQRIRELAIQAANGIYSAEDRMQIQVEVSQLVAEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG N L + F N ++ + + + +
Sbjct: 123 RIASSAQFNGMNLLTGRFSRTEGENVIGGSMWFHIGANMDQRMRVYIGTMTAVALGVRNG 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
D + + +
Sbjct: 183 VDESIMSIETADSANKSIGTIDA 205
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 41/115 (35%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + + + + + + ID +K +G +R+ +
Sbjct: 172 MTAVALGVRNGVDESIMSIETADSANKSIGTIDAALKRINKQRADLGGYQNRMEYTVVGL 231
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + ++ R+ DA++A + + Q Q L+ N S ILS+ R
Sbjct: 232 DIAAENLQAAESRIRDANIAKQMVEYTKNQVLTQSGTAMLAQANTSAQSILSILR 286
>gi|289208121|ref|YP_003460187.1| flagellar hook-associated protein 3 [Thioalkalivibrio sp. K90mix]
gi|288943752|gb|ADC71451.1| flagellar hook-associated protein 3 [Thioalkalivibrio sp. K90mix]
Length = 416
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 38/422 (9%), Positives = 97/422 (22%), Gaps = 37/422 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S +++ L ++ SG R+ +D+ + + + A
Sbjct: 3 ISTTQIFQSGINQIQAGQGELNRTSLQLGSGKRILSPSDDPSGATQINQFERIIKATKQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLR 120
+ ++ ++ +++ D + + + G ++ E+ Q++ +
Sbjct: 63 QRNMENTQPRMQQQESLLAQGTDALQRARELVVTGNNDSQTRETRGYLADELRQIRDGML 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
DIA NGE + +G + + D + +
Sbjct: 123 DIANTKDPNGEYIFAGTKSQNQPFRQDGDGEIRYEGASGAGSVREVAVSADRKIAVGHDG 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D +V + + + T T
Sbjct: 183 AAVFMDIPENDGRVGAEVLQNNGSLVLEKTGVTRVSDLDDREYSITFDENDDGELVYTVT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+
Sbjct: 243 YIDEDGEVVGLEEDGDG----------------------------------EPIQYPYVP 268
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
V + + ++ + L + + + + A
Sbjct: 269 GESIEFAGRSVTISGMPEPGDGVVSRPAENFSVFQTLDRIIDALERSGDSASARADLASA 328
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ +D + +G Q+D + +E V ++ D D A +
Sbjct: 329 SNAALADLDAVLGNFGDKRADLGGKLKAFDQQKDLNEDRLLDLESAVSQIRDLDYAEAIS 388
Query: 421 RL 422
R
Sbjct: 389 RF 390
>gi|14278894|dbj|BAB58983.1| flagellin [Bacillus subtilis]
Length = 308
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 81/200 (40%), Gaps = 3/200 (1%)
Query: 9 SAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
+A++ S++L + + +++SSGLR++ A D+AA +I++ M+S L S
Sbjct: 1 AALNTSRQLNAGSNSAAKNMEKLSSGLRINRAGDDAAGLAISEKMRSQIRGLDMASKNAQ 60
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARG 125
G S + ++ +++ ++ + T +D +Q E+ QL S++ I+
Sbjct: 61 DGISLIQTSEGALNETHSILQRMSELATQAANDTNTDSDRFELQKEMDQLASEVTRISTD 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+ FN + L + T I + + N + + ++ T
Sbjct: 121 TEFNTKKLLDGTAQNLTFQIGANEGQTMSLSINKMDSESLKVGTTYTVSNDQNTLTSTDG 180
Query: 186 RYGLLDRNHKIKVEPQVLKD 205
+ + + +V K
Sbjct: 181 KSTATWADEVTDPDGKVTKA 200
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 30/70 (42%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ I T I ++ K+G++ +R+ + + + + R+ D DMASE +
Sbjct: 239 LTTIKTAIDTVSSERAKLGAVQNRLEHTINNLGTSSENLTSAESRIRDVDMASEMMEYTK 298
Query: 425 LQTQQQLAVQ 434
Q +
Sbjct: 299 NNILTQASQA 308
>gi|254516996|ref|ZP_05129054.1| flagellar hook-associated protein 3 [gamma proteobacterium NOR5-3]
gi|219674501|gb|EED30869.1| flagellar hook-associated protein 3 [gamma proteobacterium NOR5-3]
Length = 402
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 44/417 (10%), Positives = 102/417 (24%), Gaps = 53/417 (12%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
+L Q +++G R+ +D+ + ++ D + L ++ + ++
Sbjct: 22 QADLARTQLELATGKRIQSPSDDPSGAVKILDLEEDIRLVDQYQRNASLAQGQLAVEEST 81
Query: 81 MSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
++ +V+ ++ SI E+ +L +A N E
Sbjct: 82 LTGVNNVLQRVRELTVQANNATQSPETRASIAVEVKARLEELVALANTRDGNDEYLFAG- 140
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ + + + N
Sbjct: 141 -----FQAQTQPFTQQGGTVVYSGDDGQRFLDIAASAQVAVRDSGSRVFLAVDAGNGSFD 195
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
V ++S S + T A T+ A + P
Sbjct: 196 FSAAATNSGTAVVSESSADNSFVRDDYTVTFSQLTPADPITYSVTDSGAAVVATGNYTPG 255
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ +G +
Sbjct: 256 EAISFNGARLVIEGT--------------------------------------------P 271
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
D +S +DS + L + + + A+ ++ +D I
Sbjct: 272 EDGDSINIDSAPKQSIFETLQGIVDALENSSSSPSGGAAVNNALASGLNNLDQAIGNVLE 331
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G +RI Q+ + ++ + + D D A ++L+ Q A Q
Sbjct: 332 VQSDVGVRLNRIESQQSINEEFNLQLQTTLSDVQDVDFAEAISKLNLQLVALQAAQQ 388
>gi|57238729|ref|YP_179511.1| flagellin [Campylobacter jejuni RM1221]
gi|57167533|gb|AAW36312.1| flagellin subunit protein FlaB [Campylobacter jejuni RM1221]
Length = 573
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 46/279 (16%), Positives = 90/279 (32%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + +
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRITSGG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ K + ++
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGTGLGALAEEINKSADKTGVRATFTVETRGMAAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + G + S
Sbjct: 245 RAGTTSNDFAINGVTIGQVAYEDGDGNGALVAAINSVKD 283
Score = 97.1 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T IGS+ +++ + + I + + V+ + D D
Sbjct: 477 VTTLKGAMAVMDIAETATTNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVD 536
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A+S N +L L +
Sbjct: 537 FAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 573
>gi|126652474|ref|ZP_01724646.1| flagellin protein [Bacillus sp. B14905]
gi|169826738|ref|YP_001696896.1| flagellin [Lysinibacillus sphaericus C3-41]
gi|126590745|gb|EAZ84860.1| flagellin protein [Bacillus sp. B14905]
gi|168991226|gb|ACA38766.1| Flagellin [Lysinibacillus sphaericus C3-41]
Length = 270
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 67/181 (37%), Gaps = 3/181 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++ + L N +++SSG +++ A D+AA +I++ M+ L
Sbjct: 3 IQHNISALNTHRNLAFNNTQASKNLEKLSSGYKINRAGDDAAGLAISEKMRGQIRGLDMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ S + A+ +++ ++ ++ D ++Q E+ L S++
Sbjct: 63 TKNAQDSVSLIQTAEGALNETHSILQRMRELAVQSANDTNVSTDRDALQKEVDALTSEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L + I + S + + + +
Sbjct: 123 RISTDTEFNTQKLLNSSFKGKVFHIGANKDQSITLTIKDMGAKGIGVSGVKIDKQSVANK 182
Query: 181 T 181
Sbjct: 183 A 183
Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 39/97 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+++ + +S I+ ++ + +G++ +R+ + + + + R+ D D
Sbjct: 174 IDKQSVANKAISTINKALETVSTQRSALGAVQNRLEHTINNLGATSENLTAAESRIRDTD 233
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + Q A L+ N +L L +
Sbjct: 234 MAKEMMGFTKNNILMQAAQSMLAQANQQPQGVLQLLQ 270
>gi|42524444|ref|NP_969824.1| flagellin [Bdellovibrio bacteriovorus HD100]
gi|39576653|emb|CAE80817.1| flagellin [Bdellovibrio bacteriovorus HD100]
gi|48927383|emb|CAG38108.1| flagellin [Bdellovibrio bacteriovorus]
Length = 277
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 78/203 (38%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN SA++A + L + +++SG R++ AAD+AA +I++ +K+ + +
Sbjct: 5 VTTNISALNAQRNLVGSQRQINDSMAKLASGSRINKAADDAAGLAISEGLKAQIRSAAQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
G S V A+ G+++ +++ ++ T+ + E+ QL+S+++
Sbjct: 65 QRNANDGISMVQTAEGGLNEIGNIVVRLRELGIQAASDTVGETERGMLNKEVQQLKSEMQ 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +++ L + R + L V +
Sbjct: 125 RIASVTTWGTTKLLDGSSPKFDFQVGLFNNSEEDRISFNASENVATLDALGLSGVDFSTK 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
E G+LD +
Sbjct: 185 EGAQEALGMLDNAQTSISGTRAN 207
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 39/96 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ K +E + +D + +G++ +R+ D + + ++ + R+ D D
Sbjct: 181 FSTKEGAQEALGMLDNAQTSISGTRANLGALQNRLTSTVDNLGVAQENLSAANSRIRDTD 240
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+A S+ ++ Q L+ N S L L
Sbjct: 241 VAQASSEMTRNNILLQAGTSTLAQANQSNQLALKLI 276
>gi|255523747|ref|ZP_05390713.1| flagellar hook-associated protein 3 [Clostridium carboxidivorans
P7]
gi|296186749|ref|ZP_06855151.1| flagellar hook-associated protein 3 [Clostridium carboxidivorans
P7]
gi|255512616|gb|EET88890.1| flagellar hook-associated protein 3 [Clostridium carboxidivorans
P7]
gi|296048786|gb|EFG88218.1| flagellar hook-associated protein 3 [Clostridium carboxidivorans
P7]
Length = 450
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 52/432 (12%), Positives = 124/432 (28%), Gaps = 3/432 (0%)
Query: 6 TN-HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN A + + NL+ +Q ++S+G + +D+ + + M + A + +
Sbjct: 4 TNKMLANNYLTDMSANLNNLQRIQRQMSTGKNFTKPSDDPFNVARSMQMHTAIDANTQYN 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIAR 124
I + +D +++ +V +I+ K+ A S ++ ++ IA+
Sbjct: 64 KNITNTINWLDTTDTALNQLGNVFQSIREKLVASGNAAYGSDERTKIKDEINQRIGQIAQ 123
Query: 125 --GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
++F GE G+S A D + T+
Sbjct: 124 ILNTTFAGEYVFGGTKGASKPVDASMDSSIGPVDSTLGGGVGTVGGKFYGSGNAKFKIEI 183
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + F + + A++
Sbjct: 184 AEVNSSGKATKINVSKSTDNGATFKAISSSSIPINKDGAFDIGNDLTFTIADASSNKAAV 243
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
T + + TS + I N + I++
Sbjct: 244 IDATTKQKTSDGSIYTFDCTSSGNAQLIYCKEDKTELITDPNKATTEDVLQFDMISNKRQ 303
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
S V D DL + + + + ++ K
Sbjct: 304 TEISQGVLVEYNVSASDVIKYGDGDSDDLRSLLSRIINNLDGKDNDGNSNESIATKALTN 363
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ ++ +D IK ++G+ +R+ ++ + + + D D+ +
Sbjct: 364 DDLADLDKAIKQTLKIRSEVGAKQNRMDSAKEQNVQGNADMTDILSKTEDIDVTEKVMEF 423
Query: 423 SALQTQQQLAVQ 434
+ +QT ++Q
Sbjct: 424 ATMQTVYLASLQ 435
>gi|114054854|gb|ABI50027.1| FlaA [Clostridium botulinum]
Length = 274
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNARRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I+ + FN ++ + + ++
Sbjct: 123 RISSQTQFNTKSLINGAVSXDAXAMT 148
Score = 84.0 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 44/136 (32%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
D + T + + I + + + + ++ ID I
Sbjct: 139 AVSXDAXAMTFQIGANSGQTIKLTIGSMDAKTLXVDXIKLDDTAANVTKQIATIDNAINS 198
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ K+G+ +R+ + + ++ R+ D DMA E + Q A
Sbjct: 199 VSKERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQA 258
Query: 435 ALSIVNNSTARILSLF 450
L+ N + +L L
Sbjct: 259 MLAQANQAPQGVLQLL 274
>gi|3098303|gb|AAC63949.1| flagellin [Pseudomonas putida]
Length = 669
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 68/181 (37%), Gaps = 3/181 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN +++ + L + L R+SSGL+++ A D+AA I+ + S L+
Sbjct: 3 LTVNTNITSLGVQKNLNRASDALGTSMSRLSSGLKINSAKDDAAGLQISNRLTSQISGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S A+ M + +++ ++ D S+Q E T L +
Sbjct: 63 VAVKNANDGISIAQTAEGAMQASTNILQRMRELALQSANGSNSDEDRTSLQQEFTALSGE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I+ ++F G N L S++ + + + Y +
Sbjct: 123 LTRISSTTTFGGRNLLDGTFTSTSFQVGANANETISFGMKSVSASELKGTYNEASVDAGT 182
Query: 179 S 179
+
Sbjct: 183 N 183
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 48/110 (43%)
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
+ + + N + + + ++ + +D I+ + ++G++ +R D ++
Sbjct: 560 AGTTNAVTMNTSVNDLSILDAASAQQAILALDGAIQQVDSQRSQLGAVQNRFDSTVDNLQ 619
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
+ + R+ DAD ASE+ L+ QT QQ + LS N +L
Sbjct: 620 SIGENSTAARSRVQDADFASETAELTKQQTLQQASTAILSQANQLPQSVL 669
>gi|82543609|ref|YP_407556.1| flagellin [Shigella boydii Sb227]
gi|81245020|gb|ABB65728.1| flagellin [Shigella boydii Sb227]
gi|320184753|gb|EFW59545.1| Flagellar biosynthesis protein FliC [Shigella flexneri CDC 796-83]
gi|332096669|gb|EGJ01660.1| flagellin [Shigella boydii 3594-74]
Length = 568
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 79/273 (28%), Gaps = 3/273 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRILELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ S + +S A A
Sbjct: 184 KAATVSDLTAAGATGTGPYAVTTNNTALSASDALSRLKTGDTVTTTGSSAAIYTYDAAKG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ + +GT+ S +
Sbjct: 244 NFTTQATVADGDVVNFANTLKPAAGTTASGVYT 276
Score = 99.8 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 39/317 (12%), Positives = 95/317 (29%)
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
D + + + +D + +
Sbjct: 252 ADGDVVNFANTLKPAAGTTASGVYTRSTGDVKFDVDANGDVTIGGKAAYLDATGNLSTNN 311
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + T + + T + + T+ + T+ + +A
Sbjct: 312 AGIASSAKLSDLFASGSTLATTGSIQLSGTTYNFGAAATSGVTYTKTVSADTVLSTVQSA 371
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A +G + + + ++ N++ + + T ++ N
Sbjct: 372 ATANTAVTGATIKYNTGIQSATASFGGANTNGAGNSNDTYTDADKELTTTASYTINYNVD 431
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
T + + K + + +N T T+ + A ++ ++ +D I
Sbjct: 432 KDTGTVTVASNGAGATGKFAATVGAQAYVNSTGKLTTETTSAGTATKDPLAALDEAISSI 491
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G+I +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 492 DKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 551
Query: 436 LSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 552 LAKANQVPQQVLSLLQG 568
>gi|284810830|gb|ADB96210.1| FliC2 [Yersinia enterocolitica]
gi|284810834|gb|ADB96213.1| FliC2 [Yersinia enterocolitica]
gi|284810850|gb|ADB96225.1| FliC2 [Yersinia enterocolitica]
Length = 381
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 86/260 (33%), Gaps = 3/260 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + + + +
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTATDSSYDFQVGSKDNEQISIAIGKSSGWNLAAAGTGGVS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + + + D+ + ++ T + A + A
Sbjct: 181 GDTINTYKFTTTTALDTAKTAVTTKTTDLATAEKAYQKAVADDAANGTTLADATARDAAK 240
Query: 238 TFDQAKGIATIPVPLPAAPA 257
T + A
Sbjct: 241 TALTTANGTYTTALKASTDA 260
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 45/351 (12%), Positives = 94/351 (26%), Gaps = 1/351 (0%)
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
+ + Q+ + + G S + A+ +G +
Sbjct: 32 SSGLRINSAKDDAAGQAIANRFTSNINGLTVAARNANDGISLSQTAEGALGEINNNLQRV 91
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+T +DS + + + +K +D S
Sbjct: 92 RDLTVQAQNSSNSASDIDSIQSEVNQRMEEINRVTKQTDFNGIKVLDNRTATDSSYDFQV 151
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
K + ++ ++ A TT+ +K+ +
Sbjct: 152 GSKDNEQISIAIGKSS-GWNLAAAGTGGVSGDTINTYKFTTTTALDTAKTAVTTKTTDLA 210
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+ A + T+ T AK T + S + +
Sbjct: 211 TAEKAYQKAVADDAANGTTLADATARDAAKTALTTANGTYTTALKASTDAGEAVNGNART 270
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
+ A + A ++ ID +K +G+ +R +
Sbjct: 271 VAAEGFDVLKGQVAADGTAAGTTPLADIDKALKAVDTQRSVLGASQNRFESTITNLNNTV 330
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R+ DAD ++E + +S Q QQ L+ N +LSL R
Sbjct: 331 NNLTSARSRIQDADYSTEVSNMSRAQILQQAGTSVLAQANQVPQTVLSLLR 381
>gi|222823205|ref|YP_002574778.1| flagellin [Campylobacter lari RM2100]
gi|222538426|gb|ACM63527.1| flagellin [Campylobacter lari RM2100]
Length = 569
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 75/211 (35%), Gaps = 3/211 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN AM+A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGAMNAHANSTITARELDKSLARLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKVKATQAAQDGQSTKTRNMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + I + + ++ S
Sbjct: 125 NIANTTAFNGKQLLSGGFTNQEFQIGAQSNQTVKASIGPTQSSKIGVTRFETGSMSNTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ + + +
Sbjct: 185 IAQLTIKNYNGIDDFKFQPVVISTSVGTGMG 215
Score = 98.3 bits (242), Expect = 3e-18, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 51/161 (31%)
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
+ + + G S V +V S + + + NI
Sbjct: 409 MSQGSGYSVGSGKNMSLVYNSTEALAFVTAFSIAFGTGSSANGASQFANFVASANIAARE 468
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ M+ ++T A IG++ ++I + I + + ++ +
Sbjct: 469 QSPGVTTLKGAMAMMDIVETATANLDAIRADIGAVQNQITATLNNISVTQVNIKSAESNI 528
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D D A+ES S Q A+S N +L L +
Sbjct: 529 RDVDFAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 569
>gi|332531625|ref|ZP_08407522.1| flagellar hook-associated protein 3 [Hylemonella gracilis ATCC
19624]
gi|332038988|gb|EGI75417.1| flagellar hook-associated protein 3 [Hylemonella gracilis ATCC
19624]
Length = 459
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 60/454 (13%), Positives = 127/454 (27%), Gaps = 14/454 (3%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
T +S L L Q+++++G +V +D+ + A+ + + +
Sbjct: 7 TANSYDRTLSILTQRQVELSQQQEKLAAGKKVLRGSDDPTGAAQAERAMTRSTRVDVEVR 66
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLRDI 122
A+ L + V + + + ++D++ I+ K+ G D ++ EI ++ QL
Sbjct: 67 ALNLQRNTVALTEGTLGNSMDLLQKIREKLVYAGDGALTPDDRAALALEIKGMRDQLFGY 126
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A NG + A + +F + + +
Sbjct: 127 AIKQDSNGIPLFGGLGSAPQAFTDEVTGVTFNGTTGNRASTLVSVPGTMDGQAVWMNVPT 186
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDV------SVYDASGTISTKKFKLATTSGAWLKAAN 236
G + I P L T A +
Sbjct: 187 GNGIFTTDLGMGTIPTSPTALIGNFTTGVPASPTDPDWTYDKTMNTVNKGEVWAGVGQVV 246
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
+ + A P S + + + R A
Sbjct: 247 DPAALTGNNYIVRFNVTPQLAEPAPVSTNPDNWTLPAVVTYDVYRYDPIADPTGAAAVAV 306
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ P + G + + K D + + Y
Sbjct: 307 ASDQPYTEGQDIIFDGVSITPNGKPADGDTLSIQASKRTDLFAVLDDAIAAIDGAANGYQ 366
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ ++ +D+ + ++A + G + +R + E + R D DM
Sbjct: 367 LSQDLAVALTQLDSGKERLSSARSEAGVLLNRTDIIETTQGDKTLQLAADRSRAEDMDMI 426
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + +Q Q A+Q + V + LSLF
Sbjct: 427 KGISDMQNMQVGYQAALQTYAQV-----QRLSLF 455
>gi|269976336|ref|ZP_06183332.1| flagellin [Mobiluncus mulieris 28-1]
gi|269935665|gb|EEZ92203.1| flagellin [Mobiluncus mulieris 28-1]
Length = 508
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 56/134 (41%), Gaps = 2/134 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+S+ TN A+ + + + + L +++SG R+++ D+AA ++A+ M+S
Sbjct: 230 SSLNTNVMALQVYRNMANAHKILNDSLLKLTSGERINNPGDDAAGLALAENMRSQLLGSK 289
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT--DSKSIQSEITQLQSQL 119
G S V A+ + +++ ++ G +I +E+ ++ ++
Sbjct: 290 QAVRNAQDGISLVQTAEGVLGTVHNMLQRMRVLAVQGASDSNQDQRGNIVTEMDSIRVEI 349
Query: 120 RDIARGSSFNGENW 133
I + G
Sbjct: 350 GRIGEATEVLGRKI 363
Score = 98.3 bits (242), Expect = 3e-18, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 40/105 (38%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ A + + ID QI+ + A +G++ SR + + + + +
Sbjct: 401 HAQLGEIPQDASHEAFQGAIVNIDGQIEVISTARATLGAVMSRFENTINTLNVTVENLAA 460
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
GR+ D D +ES + Q + +S + +LSL
Sbjct: 461 ARGRIQDTDFTTESAEYMRGRILTQSSHAVMSQALLAPRGVLSLL 505
>gi|306820967|ref|ZP_07454587.1| flagellin [Eubacterium yurii subsp. margaretiae ATCC 43715]
gi|304551081|gb|EFM39052.1| flagellin [Eubacterium yurii subsp. margaretiae ATCC 43715]
Length = 354
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 53/345 (15%), Positives = 105/345 (30%), Gaps = 3/345 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ +N AM + L++ + ++SSG R+++A D+AA ++I++ M L
Sbjct: 3 LNSNPYAMYTLRHLQNTGNMQSLAMQKLSSGKRINNAKDDAAGYAISEKMAMQIAGLQRA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ + + ++ ++ D +SIQ EI QL S++
Sbjct: 63 SKNSLDGISMIQTAETALDEVHSMLQRMRELSVQAANDTNKLEDRESIQKEINQLTSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN D TA ++ + N + + + +
Sbjct: 123 RIGEATEFNKMKMFTADNEDGTAKSNMNIPVQLGANANQIMDVKFQTLSSTSLGISGVNQ 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ H V+ G +L S D
Sbjct: 183 GGEAFDINKVYVGHTHGTTIDEQTGAPVTPQYVKGAKYRAVDELQNMSIKERVGNVPQKD 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A + T+ + S+ +G S + T K +S
Sbjct: 243 ANGNFEYKKEYALDVTTASSATAAIHVYDNAISRVSSMRASLGASQNRLEHTIKTLDSSA 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
T + +E T + + + S + +
Sbjct: 303 ENVTQTMSRIQDTDIAEQMSEFTKYNILQQSGTSMLSQANQLPQM 347
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 41/350 (11%), Positives = 85/350 (24%), Gaps = 1/350 (0%)
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
Q ++ +A +G+ ++ +I++ +
Sbjct: 4 NSNPYAMYTLRHLQNTGNMQSLAMQKLSSGKRINNAKDDAAGYAISEKMAMQIAGLQRAS 63
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ LD +R L ++ + + +
Sbjct: 64 KNSLDGISMIQTAETALDEVHSMLQRMRELSVQAANDTNKLEDRESIQKEINQLTSEINR 123
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ + + A+ AK IPV L A S S+ S
Sbjct: 124 IGEATEFNKMKMFTADNEDGTAKSNMNIPVQLGANANQI-MDVKFQTLSSTSLGISGVNQ 182
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
DI T+ T + V +
Sbjct: 183 GGEAFDINKVYVGHTHGTTIDEQTGAPVTPQYVKGAKYRAVDELQNMSIKERVGNVPQKD 242
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
+ + + D I ++ +G+ +R+ +
Sbjct: 243 ANGNFEYKKEYALDVTTASSATAAIHVYDNAISRVSSMRASLGASQNRLEHTIKTLDSSA 302
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ V + + R+ D D+A + + + QQ LS N IL L
Sbjct: 303 ENVTQTMSRIQDTDIAEQMSEFTKYNILQQSGTSMLSQANQLPQMILKLL 352
>gi|332161354|ref|YP_004297931.1| flagellin [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
gi|259045866|gb|ACV91381.1| FliC3 [Yersinia enterocolitica]
gi|318605277|emb|CBY26775.1| flagellar biosynthesis protein FliC [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325665584|gb|ADZ42228.1| flagellin [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
gi|330863290|emb|CBX73414.1| flagellin [Yersinia enterocolitica W22703]
Length = 369
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 35/209 (16%), Positives = 72/209 (34%), Gaps = 3/209 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + + +
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTATDSSYDFQVGSKDNEQISIAIGKSSGWNLATANADGTS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + + K
Sbjct: 181 SETVNTYAFTKTTALDTKQAAYDSANGAY 209
Score = 94.0 bits (231), Expect = 5e-17, Method: Composition-based stats.
Identities = 45/358 (12%), Positives = 97/358 (27%)
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+ + S E ++ ++ T + A++
Sbjct: 12 LTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGLTVAARNANDGI 71
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ + I+ L L + + + +D + + D
Sbjct: 72 SLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRMEEINRVTKQTDF 131
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+G +S + + + I A A T+S T + + +
Sbjct: 132 NGIKVLDNRTATDSSYDFQVGSKDNEQISIAIGKSSGWNLATANADGTSSETVNTYAFTK 191
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ + + G T + K D + D+
Sbjct: 192 TTALDTKQAAYDSANGAYLAAVKADAANGTTTAAALKGAADTATTDLATAVKDATAVNEA 251
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
++ T A + K ++ ID +K +G+ +R
Sbjct: 252 VNGKSRTVAAKGFDVLNGTVAADGKATGTSPLADIDKALKAVDTQRSVLGASQNRFESTI 311
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + R+ DAD ++E + +S Q QQ L+ N +LSL R
Sbjct: 312 TNLNNTVNNLTSARSRIQDADYSTEVSNMSRAQILQQAGTSVLAQANQVPQTVLSLLR 369
>gi|284810841|gb|ADB96218.1| FliC2* [Yersinia enterocolitica]
Length = 374
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 71/209 (33%), Gaps = 3/209 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + + +
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTATDSSYDFQVGSKDNEQISIAIGKSSGWNLAAAKTDGTS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + +
Sbjct: 181 SDTVNTYKFTTTDAIKTAQTDVTAKNTAY 209
Score = 93.7 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 60/206 (29%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
+ ++ + + A + + +A + T
Sbjct: 169 WNLAAAKTDGTSSDTVNTYKFTTTDAIKTAQTDVTAKNTAYLAAKAISDADPADAGKATA 228
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+T AK + + + ++ A + A +
Sbjct: 229 TTTAKGLLDTSNGTLATAVKTATTAGEAVNGNARTVAAEGFDVLKGQVAADGTAAGTTPL 288
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ ID +K +G+ +R + + + R+ DAD ++E + +S
Sbjct: 289 ADIDKALKAVDTQRSVLGASQNRFESTITNLNNTVNNLTSARSRIQDADYSTEVSNMSRA 348
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ L+ N +LSL R
Sbjct: 349 QILQQAGTSVLAQANQVPQTVLSLLR 374
>gi|326202862|ref|ZP_08192729.1| flagellin domain protein [Clostridium papyrosolvens DSM 2782]
gi|325986939|gb|EGD47768.1| flagellin domain protein [Clostridium papyrosolvens DSM 2782]
Length = 274
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 72/195 (36%), Gaps = 4/195 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+ ++L + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAAMNTYRQLTNNTSSTSKSLEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI----QSEITQLQSQL 119
S G S + + ++ +++ +K T D+ + EIT+L SQ+
Sbjct: 63 SRNSQDGISMIQTGEGALATVSNILVRVKELATQAANGTYDATNDLARITEEITELGSQV 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
DI + + FNG L + + + + + +
Sbjct: 123 EDIQKNTKFNGIALLDGSGDNIVLQVGQESSQTLTIKKTDTNLSDVVTAVKGYASWAKAD 182
Query: 180 STDGTERYGLLDRNH 194
N
Sbjct: 183 DASQKIDDVETQINA 197
Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 45/137 (32%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
D + I + ++ +T ++ + + + ++TQI
Sbjct: 138 DGSGDNIVLQVGQESSQTLTIKKTDTNLSDVVTAVKGYASWAKADDASQKIDDVETQINA 197
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ G+ +R+ + + + + R+ D DMA E + Q A
Sbjct: 198 VSKMRSYFGANQNRLEYNINNLDTYSENLSASESRIRDVDMAKEMMEFTKQNILSQAAQS 257
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +L L R
Sbjct: 258 MLAQANQQPQGVLQLLR 274
>gi|148979886|ref|ZP_01815764.1| flagellin [Vibrionales bacterium SWAT-3]
gi|145961578|gb|EDK26879.1| flagellin [Vibrionales bacterium SWAT-3]
Length = 374
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 71/183 (38%), Gaps = 3/183 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN +AM + L Q ++SG R++ A+D+AA I+ + L
Sbjct: 1 MVSLNTNVTAMMTQRHLSHAAEQNIESQRNLTSGYRINSASDDAAGLQISNTLNVQTRGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQS 117
S A+ + ++ D++ +++ G +D +SIQ E+ LQ
Sbjct: 61 DVALRNAQDAYSVAQTAEGALHESSDILQRLRSLGLQAANGSNDSSDRQSIQYEVVALQD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L +A ++F +N GS + I + + N + I + +
Sbjct: 121 ELDRVAITTTFADKNLFDGSYGSQSFHIGANANSISLTLRNMRSHIPEMGGQHYVGDAVD 180
Query: 178 DSS 180
Sbjct: 181 KDW 183
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 39/100 (39%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + + + ID IK + +IG +R+ + + + +V + GR+
Sbjct: 274 DNIDMSTVGGAQLSIGVIDAAIKYVDSHRSEIGGFQNRVSGTMENLNTVNRSVTESKGRI 333
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D D A EST + Q Q L+ S + L L
Sbjct: 334 RDTDFARESTEMVRSQVLQDATTALLAQAKQSPSSALGLL 373
>gi|120318|sp|P13713|FLIC_SERMA RecName: Full=Flagellin
gi|152827|gb|AAA26556.1| flagellin [Serratia marcescens]
Length = 351
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 78/204 (38%), Gaps = 3/204 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L +L +R+SSGLR++ A D+AA +I+ ++ L+
Sbjct: 4 VINTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S G S + +++ D + I+ + SIQ EITQ S++
Sbjct: 64 ASRNANDGISLAQTTEGALNEVNDNLQNIRRLTVQAQNGSNSTSDLKSIQDEITQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FNG L +D + A + I + +D +
Sbjct: 124 NRISEQTDFNGVKVLSSDQKLTIQVGANDGETTDIDLKKIDAKQLGMDTFDVTTKSAKAG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVL 203
+ T +D + + + V
Sbjct: 184 AEIATGTKITVDSDATKQADADVT 207
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 26/207 (12%), Positives = 56/207 (27%)
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
+ + + + G T +S +
Sbjct: 145 TIQVGANDGETTDIDLKKIDAKQLGMDTFDVTTKSAKAGAEIATGTKITVDSDATKQADA 204
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
+ T G T + + + ++
Sbjct: 205 DVTGLAKGQTLVSGTDADGKSAYFIATKDDATGDVAYTKAKVADDGKVTDSGTDAGVKNP 264
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ +D + +G++ +R + + + + R+ DAD A+E + +S
Sbjct: 265 LATLDKALAQVDGLRSSLGAVQNRFDSVINNLNSTVNNLSASQSRIQDADYATEVSNMSR 324
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
QQ L+ N ST +LSL R
Sbjct: 325 ANILQQAGTSVLAQANQSTQNVLSLLR 351
>gi|30721688|gb|AAP34179.1| FliC [Pseudomonas aeruginosa]
Length = 185
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 46/138 (33%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
S + + + + + V ID IK
Sbjct: 48 ADGTTSAVSGVAITDTGSTGAGTAAGTTTFTEANDTVAKIDISTAKGAQSAVLVIDEAIK 107
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + +K + + V GR+ D D A+E+ L+ Q QQ
Sbjct: 108 QIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDFAAETANLTKNQVLQQAGT 167
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 168 AILAQANQLPQSVLSLLR 185
>gi|170791557|gb|ACB38420.1| flagellin A [Aeromonas caviae]
Length = 287
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 67/160 (41%), Gaps = 3/160 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + + +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNMTNSTKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D +++Q E+ QL +++
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSAKDREALQKEVNQLGAEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
IA ++F G L G + A +
Sbjct: 125 RIAGATTFAGTKLLDGSFGGTFQVGADANQTIGFSLSQTD 164
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 42/97 (43%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ++++ +D ++ ++G++ +R+ + + V R+ DAD
Sbjct: 190 ISTQTKAQDVLGAVDAMLEVVDGKRAELGAVQNRLDSTIRNQANISENVSAARSRIRDAD 249
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+E+ ++ QQ A LS N LSL +
Sbjct: 250 FATETANMTKQNILQQAASSILSQANQRPQSALSLLQ 286
>gi|256833251|ref|YP_003161978.1| flagellin domain-containing protein [Jonesia denitrificans DSM
20603]
gi|256686782|gb|ACV09675.1| flagellin domain protein [Jonesia denitrificans DSM 20603]
Length = 293
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 91/276 (32%), Gaps = 4/276 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI N +A+++ + L + +L +++SSG R++ AAD+AA +I++ ++S G L
Sbjct: 3 LSINQNIAAVNSYRNLANTQNDLSKSLEKLSSGFRINRAADDAAGLAISEGLRSQVGGLK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
+ G S V A+ +++ ++ +++ +I +E L S+
Sbjct: 63 VAARNAQDGISVVQTAEGALTETHAILQRLRDLAVQGANDSNNTEARANITTEAKSLVSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA+ ++FNG L + + + +
Sbjct: 123 LGRIAQSTNFNGTTLLNGAAD-LNFQVGADGDANSRITVSLASANVATVATNLAVSNEAG 181
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ Q + + ++ T + +K N
Sbjct: 182 MGDTTVNDGTVAGIGFDTHTAAQSSIERINAQIESVSTARAELGAYQNRFEHTIKNINVA 241
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ + A T S++ +
Sbjct: 242 VENLSASESRIRDTDMAQEMVQFTRAQILSQAGTAM 277
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 47/136 (34%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
V S + + + T ++ A + + I+ QI+
Sbjct: 158 ITVSLASANVATVATNLAVSNEAGMGDTTVNDGTVAGIGFDTHTAAQSSIERINAQIESV 217
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ A ++G+ +R I + + + R+ D DMA E + + Q Q
Sbjct: 218 STARAELGAYQNRFEHTIKNINVAVENLSASESRIRDTDMAQEMVQFTRAQILSQAGTAM 277
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 278 LAQANQIPQGVLSLLR 293
>gi|30059904|gb|AAP13324.1| FliC [Escherichia coli]
Length = 545
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 3/154 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
++ + FNG N L D A
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTIT 157
Score = 95.6 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/291 (12%), Positives = 77/291 (26%)
Query: 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKK 221
T Y D ++ + I Q + D +S
Sbjct: 255 TSNTFSYTADGVNQTNAAANLIPAAGKTTAASVTIGGTAQNVNIDDSGNITSSDGDQLYL 314
Query: 222 FKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR 281
+ T T ++ +
Sbjct: 315 DSTGNLTKNQAGNPKKATVSGLLGNTDAKGTAVKTTIKTEAGVTVTAEGNTGTVKIEGAT 374
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
+ S A + N+ + + + ++ T+ + + +
Sbjct: 375 VSASAFTGIAYSANTGGNTYAVAANNTTNGFLAGDDLTQDAQTVSTYYSQADGTVTNSAG 434
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ N+ + ++ +D I +G+I +R+ +
Sbjct: 435 KEIYKDADGVYSTENKTSKTSDPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNLNNTTT 494
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 495 NLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 545
>gi|262166274|ref|ZP_06034011.1| flagellin protein FlaC [Vibrio mimicus VM223]
gi|262025990|gb|EEY44658.1| flagellin protein FlaC [Vibrio mimicus VM223]
Length = 351
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 34/202 (16%), Positives = 67/202 (33%), Gaps = 3/202 (1%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
+R+SSG R++ A D+AA I+ + + + L G S A+ M+++ +
Sbjct: 1 MERLSSGNRINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISIAQTAEGAMNESTSI 60
Query: 88 MSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ I++ + +++ E T LQ +L IA +SF G L G ++
Sbjct: 61 LQRIRDLALQSANGTNSTAERQALNEEATALQDELNRIAETTSFGGRKLLNGSFGEASFQ 120
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
I S + I + G + K + + +
Sbjct: 121 IGSSSGEAIIMGLTSVRADDFRMGGQSFVAEQAKTKEWGVPPTARDLKFEFTKKDGEAVV 180
Query: 205 DIDVSVYDASGTISTKKFKLAT 226
++ T
Sbjct: 181 LDIMAKDGDDIEELATYINGQT 202
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 46/351 (13%), Positives = 91/351 (25%), Gaps = 4/351 (1%)
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
+ + + + S + G S A A+ +
Sbjct: 5 SSGNRINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISIAQTAEGAMNESTSILQRI 64
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ T + + K ++ S +AS I +
Sbjct: 65 RDLALQSANGTNSTAERQALNEEATALQDELNRIAETTSFGGRKLLNGSFGEASFQIGSS 124
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ ++A + +A +K A +
Sbjct: 125 SGEAIIMGLTSVRADDFRMGGQSFVAEQAKTKEWGVPPTARDLKFEFTKKDGEAVVLDIM 184
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
DI AT N T + K+ + + S + +G
Sbjct: 185 AKDGDDIEELATYINGQTDLFKASVDQDGKLQVFVAEPNIQGNFNISGGLATELGLNGGP 244
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
V + V ID +K + +G+ +R+ + ++
Sbjct: 245 GVK----TTVKDIDITSVGGSQNAVGIIDAALKYVDSQRADLGAKQNRLSHSISNLSNIQ 300
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ VE R+ D D A E+T+L+ Q QQ L+ +SL +
Sbjct: 301 ENVEASKSRIKDTDFAKETTQLTKSQILQQAGTSILAQAKQLPNSAISLLQ 351
>gi|320538525|ref|ZP_08038386.1| bacterial flagellin [Treponema phagedenis F0421]
gi|320144632|gb|EFW36387.1| bacterial flagellin [Treponema phagedenis F0421]
Length = 286
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 81/203 (39%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM A + L N + +++SSG R++ A D+A+ ++++ M+S L+
Sbjct: 3 INHNMSAMFAQRTLGVTNNAIGKDIEKLSSGYRINRAGDDASGLAVSEKMRSQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S G + + + +A + + D+M I+ D IQ E++QL +++
Sbjct: 63 STNASNGVNFIQVTEAYLQETTDIMQRIRELAVQAANGIYSAEDRMYIQVEVSQLVAEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG N L T + F N ++ + + + +
Sbjct: 123 RIASSAQFNGMNLLTGRFARETGENVIAGSMWFHIGANMDQRMRVYIGTMTAAALGVRDA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
TD + + +
Sbjct: 183 TDESIMTLDTADSANRSIGTIDA 205
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 44/115 (38%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + + + + + + ID +K +G +R++ +
Sbjct: 172 MTAAALGVRDATDESIMTLDTADSANRSIGTIDAALKKINKQRADLGGYQNRMNYTVIGL 231
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + ++ R+ DADMA + + Q Q L+ NN+T +LSL R
Sbjct: 232 DIAAENLQAAESRIRDADMAKQMVEYTKNQVLAQSGTAMLAQANNNTQLVLSLLR 286
>gi|105894597|gb|ABF77762.1| flagellin-like protein [Burkholderia cenocepacia AU 1054]
Length = 438
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 93/265 (35%), Gaps = 3/265 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +I+ M++ L
Sbjct: 55 MLGINSNINSLVAQQNLNGSQNALSQAITRLSSGKRINSAADDAAGLAISTRMQTQINGL 114
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ G S + A + +S + + I+ TD ++Q E++Q
Sbjct: 115 NQGVSNANDGVSMIQTASSALSSLTNSLQRIRQLAVQASTGTMSTTDQAALQQEVSQQIQ 174
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG N L G + + +V + D + + I L + +
Sbjct: 175 EVNRIASQTTYNGTNILDGSAGIVSFQVGANVGQTISLDLSQSMSAAKIGGGLVQKGQTV 234
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ T + + + Y + + S A
Sbjct: 235 GTVTGLSLDNNGAYTGSGATITAINVLSDGKGGYTFTDQNGGAISQTVAQSVFGANATTG 294
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTT 262
T + A +A T
Sbjct: 295 TGTAVGNLTLQSGATGAGTSAAQQT 319
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/386 (10%), Positives = 106/386 (27%), Gaps = 10/386 (2%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ ++ ++ +S+AI +S+ K + D + + T++Q+Q+ + +G
Sbjct: 63 NSLVAQQNLNGSQNALSQAITRLSSGK-----RINSAADDAAGLAISTRMQTQINGLNQG 117
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + SS S + + + + +
Sbjct: 118 VSNANDGVSMIQTASSALSSLTNSLQRIRQLAVQAST-----GTMSTTDQAALQQEVSQQ 172
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
+ + + D + + + S + A KG
Sbjct: 173 IQEVNRIASQTTYNGTNILDGSAGIVSFQVGANVGQTISLDLSQSMSAAKIGGGLVQKGQ 232
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
V + T + + +V + + + +
Sbjct: 233 TVGTVTGLSLDNNGAYTGSGATITAINVLSDGKGGYTFTDQNGGAISQTVAQSVFGANAT 292
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + S ++ + +N + + +
Sbjct: 293 TGTGTAVGNLTLQSGATGAGTSAAQQTAITNAINQINAVNKPATVSNLDISTVSGANVAM 352
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID ++ +G+ +R + + ++ DA+ A E+ +S
Sbjct: 353 VSIDNALQTVNNVQAALGAAQNRFTAIATSQQAESTDLSSAQSQITDANFAQETANMSKN 412
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ + L+ N+ ++L L +
Sbjct: 413 QVLQQAGISVLAQANSLPQQVLKLLQ 438
>gi|291531777|emb|CBK97362.1| Flagellin and related hook-associated proteins [Eubacterium siraeum
70/3]
Length = 550
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 40/111 (36%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
+ + + + + +D +K + +G++ +R+ + +
Sbjct: 440 NDMSSSAIGVANADVSTQDSANAAIDMVDAAVKTVSMQRAGLGALQNRLEYTVNNLTTTN 499
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + ++ D DMA+E + QQ + L+ N IL L +
Sbjct: 500 ENLTAAESQIRDTDMATEMINYTKNNILQQASQAMLAQANQQPQAILQLLQ 550
Score = 117 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 48/291 (16%), Positives = 98/291 (33%), Gaps = 4/291 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N +A++A+ K+ + +++SSG +++ A DNAA +I++ M+S LS
Sbjct: 5 VVQHNLNAINANNKMNINVSGTKKATEKLSSGYQINRAGDNAAGLAISEKMRSQIRGLSQ 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD----SKSIQSEITQLQSQ 118
+ G S + A+ G+++ ++ ++ ++IQ E+ L+S+
Sbjct: 65 ATKNANDGISLIQTAEGGLNETHSILQRMRELAVQSANGTYQDDTDREAIQLEVDALKSE 124
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + +NG L LG S A + + + TI + V
Sbjct: 125 IDRIASSTEYNGMKLLDGSLGGSKAVTEFGAKYGAVSTADTDLVGATITSNIAGVKVTTA 184
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ G L + ++ + D I+ +
Sbjct: 185 YAASGKGGENALWSADGKTLTMNLVAGETYTQKDIDNLIANATQSKDGGQTQAPSEISIK 244
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
A+ A A T S V + + +
Sbjct: 245 LANGVMTASKAGDTDATVAGLRATGSNSADVIKLVGDKKSGAHGSSDQVTF 295
>gi|239996705|ref|ZP_04717229.1| flagellin-like protein [Alteromonas macleodii ATCC 27126]
Length = 271
Score = 117 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 73/179 (40%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN S+++A ++L D++ +L +R+SSG R++ A+D+AA I++ M S L
Sbjct: 5 VNTNVSSLNAQRQLFDVSSSLSTSFERLSSGFRINSASDDAAGLQISERMTSQVQGLDQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
S V A+ + ++ + I+ D ++ SEIT L++++
Sbjct: 65 VRNANDAISVVQTAEGALDESTTALQRIRTLAIQAQNGVNSSEDRAALSSEITALKNEIT 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + F G+N L + A + + + +
Sbjct: 125 RIADETEFAGKNLLDGTFSADFLVGANAGQSVTVAISSDFDATALTVSGTVDSDANAGT 183
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 37/96 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ +D + +G++ +R + + + V R+ D D
Sbjct: 175 VDSDANAGTLLGQVDAALSTIGTQRADLGALQNRFQSTIRNLSNISENVSAARSRIQDTD 234
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A+E+ L+ Q QQ ++ LS N LSL
Sbjct: 235 FATETANLTRNQIMQQASLSVLSQANQRPQAALSLL 270
>gi|158327329|emb|CAM82835.1| putative flagellin FlaA [Yersinia enterocolitica W22703]
gi|330863336|emb|CBX73459.1| hypothetical protein YEW_ES20540 [Yersinia enterocolitica W22703]
Length = 430
Score = 117 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 56/452 (12%), Positives = 123/452 (27%), Gaps = 27/452 (5%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI A A++ L ++S+GLR+ A D+AA IA + + +
Sbjct: 3 LSINDQSQAFIAAKALNKSQNMYNKSTSQLSTGLRILSAKDDAAGSQIAAGLNAAITGQN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
S+ ++ A ++ + +++ +K T D ++ +E L +
Sbjct: 63 VALRNNSQSSAMLEAANGALAGSDGILNRMKELATQAANATNGAEDRAALNAEFKSLGEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L+ ++F D
Sbjct: 123 LQSTLEKTTFGDGTLFAAGG------------------------KLDGKLTFQTGASATD 158
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + + + + + + A T
Sbjct: 159 VIEIDLSKGVKGLMDTVAGTATVGNAAANTGTIEKAVGEAEAAIATKVGDVKNAETAVKT 218
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
QA A I A + A A + ATT N+
Sbjct: 219 AQQAFDSAFINAKNNAPTLDKAVFGQMDHASESWNQAKADLLGKAFYADQGAATTANAAA 278
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
++ V D ++ + + + + ++
Sbjct: 279 GTYVLGTDKMSNDAVVEVAVKGVDAPKKDLADAESKLQNIKDHDSRYRSAGIVSLNLDDT 338
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+ +E ++ + I ++ + + +R+ D + MRD +++AD +
Sbjct: 339 KSAQEAITTLTKAIGSYSSVTASLAAGINRLGYSSDNLTNMRDGNMAAKDSIMNADAVAA 398
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLF 450
ST + ++ALS + LF
Sbjct: 399 STAQNTAMLLMNSGIKALSKNTQMGQMVAQLF 430
>gi|158321540|ref|YP_001514047.1| flagellar hook-associated protein 3 [Alkaliphilus oremlandii
OhILAs]
gi|158141739|gb|ABW20051.1| flagellar hook-associated protein 3 [Alkaliphilus oremlandii
OhILAs]
Length = 438
Score = 117 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 56/425 (13%), Positives = 131/425 (30%), Gaps = 22/425 (5%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + ++ L+ L+ Q ++G ++ +D+ + +KSD L+
Sbjct: 3 ITNNMMIANMTRNLQTNIRKLDRTQLEYNTGKKIHRPSDDPVGITRVLKIKSDRSELAQF 62
Query: 64 SDAIGLGSSKVDIAKAG---MSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ SS ++ + + + +++ + G +K+IQ+E+ Q++
Sbjct: 63 KKNVEDASSWLENTEGAILGLVSDTGTLVRLRDIMIQGANGTLTAEQTKNIQNEVAQIKQ 122
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ ++++G A K + Y+ L
Sbjct: 123 QIIS-MGNTTYSGNYIFSGKNTDKPLLNADGTYNINPTQFLDKGIVDHRINYMVGVGEEL 181
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ +T GT + +D + +++ V + ++ A ++ +T+
Sbjct: 182 NINTIGTALFEAVDLSMNVELPSAVGEVKEIDFLGAKIKLTGLPATPPSTATPEYGWEIK 241
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
D + + + T
Sbjct: 242 IGDGVTLTGPEISGTYSGTPPTL---------------DVEATKEAIYNAVNTGFTGLDP 286
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
T + + K T +S + + + I R
Sbjct: 287 TQKEEWNKLLLEKEIPVDINNLDFKTFTNSGEVKGIVAQPKKAGLINLIERIEQKLIEAN 346
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ +++ +D I A A G IG+ +R L I+ + + +L DAD++
Sbjct: 347 YEEVSQLLGPLDKFIDKALAVRGDIGAKVNRTELILGRIEDDAINLRELQSKLEDADLSE 406
Query: 418 ESTRL 422
+ RL
Sbjct: 407 TAIRL 411
>gi|301053298|ref|YP_003791509.1| flagellin [Bacillus anthracis CI]
gi|300375467|gb|ADK04371.1| flagellin [Bacillus cereus biovar anthracis str. CI]
Length = 354
Score = 117 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + M+ +++ +++ + ++ E L+ Q+
Sbjct: 63 ANNTQDGISLIRTADSAMNSVSNILLRMRDLANQSANGTNTSENQAALDKEFGALKEQIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
I+ + FN + L +
Sbjct: 123 YISTNTEFNDKKLLDGSNETIAIQT 147
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/352 (9%), Positives = 94/352 (26%), Gaps = 1/352 (0%)
Query: 100 ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
+S Q + Q Q+++ + A +G+ ++ +IA +
Sbjct: 4 NTNINSMRTQEYMRQNQAKMSN-AMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 62
Query: 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
+ ++S ++ R L + + A
Sbjct: 63 ANNTQDGISLIRTADSAMNSVSNILLRMRDLANQSANGTNTSENQAALDKEFGALKEQIN 122
Query: 220 KKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ L + + + N ++ + ++ ++
Sbjct: 123 YISTNTEFNDKKLLDGSNETIAIQTLDNADEGKKIDIKLANVSTQSLSIDKLTIGGASQK 182
Query: 280 IRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGY 339
+D + T + + + D +
Sbjct: 183 TIDDVADKFTALKTTTTTDKADIQKEVDAVMKEFDKVKGSMSAADAKAVTDKLTAYKNAA 242
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
A V+ ID+ ++ + +G+ +R+ + +K
Sbjct: 243 DTDAAKDLGGAFDKTKVTVANPNAAVAAIDSALENIASNRATLGATLNRLDFNVNNLKSQ 302
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ ++ DADMA E + ++ + + + LS N + + L +
Sbjct: 303 SSSMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 354
>gi|284810837|gb|ADB96215.1| FliC2* [Yersinia enterocolitica]
Length = 374
Score = 117 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 71/209 (33%), Gaps = 3/209 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + + +
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTATDSSYDFQVGSKDNEQISIAIGKSSGWNLAAAKTDGTS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + +
Sbjct: 181 SDTVNTYKFTTTDAIKTAQTDVTAKNTAY 209
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 38/97 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ A ++ ID +K +G+ +R + + + R+ DAD
Sbjct: 278 ADGTAAGTTPLADIDKALKAVDTQRSVLGASQNRFESTITNLNNTVNNLTSARSRIQDAD 337
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++E + +S Q QQ L+ N +LSL R
Sbjct: 338 YSTEVSNMSRAQILQQAGTSVLAQANQVPQTVLSLLR 374
>gi|284810825|gb|ADB96206.1| FliC [Yersinia enterocolitica]
gi|284810829|gb|ADB96209.1| FliC [Yersinia enterocolitica]
gi|284810840|gb|ADB96217.1| FliC* [Yersinia enterocolitica]
gi|284810849|gb|ADB96224.1| FliC [Yersinia enterocolitica]
gi|284810853|gb|ADB96227.1| FliC [Yersinia enterocolitica]
gi|284810857|gb|ADB96230.1| FliC [Yersinia enterocolitica]
gi|284810861|gb|ADB96233.1| FliC [Yersinia enterocolitica]
Length = 366
Score = 117 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 71/209 (33%), Gaps = 3/209 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + + +
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTATDSSYDFQVGSKDNEQISIAIGKSSGWNLATAKADGTS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + +
Sbjct: 181 TDTVNTYAFTKKAALDTAQTDYDTANTAY 209
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 40/364 (10%), Positives = 90/364 (24%)
Query: 88 MSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
+ + S+S + S I + S+ +
Sbjct: 3 VINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGLTV 62
Query: 148 SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
+ + + + + + D + I+ E +
Sbjct: 63 AARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRMEEI 122
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
V + K T + + + D + I A ++
Sbjct: 123 NRVTKQTDFNGIKVLDNRTATDSSYDFQVGSKDNEQISIAIGKSSGWNLATAKADGTSTD 182
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
+ + + +D T + + T K + +S
Sbjct: 183 TVNTYAFTKKAALDTAQTDYDTANTAYLAAVKSGVAADITTTKATLDGKNTALATAVKNS 242
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
++ + T ++ ID +K +G+ +
Sbjct: 243 TDINEAVNGKARTVAAKGFDVLSGTVDSAGVATGTTPLADIDKALKAVDTQRSVLGASQN 302
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
R + + + R+ DAD ++E + +S Q QQ L+ N +L
Sbjct: 303 RFESTITNLNNTVNNLTSARSRIQDADYSTEVSNMSRAQILQQAGTSVLAQANQVPQTVL 362
Query: 448 SLFR 451
SL R
Sbjct: 363 SLLR 366
>gi|114054860|gb|ABI50030.1| FlaA [Clostridium botulinum]
Length = 275
Score = 117 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+ +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNAMNXHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 63 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I+ + FN ++ + + ++
Sbjct: 123 RISSQTQFNTKSLINGAVSKXADAMT 148
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 39/102 (38%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
N + + + ++ ID I + K+G+ +R+ + + ++ R
Sbjct: 174 DNIKLDDTAANVTKQIATIDNAINSVSKERAKLGANQNRLEHTIANLDNSAENLQAAESR 233
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D DMA E + Q A L+ N + +L L R
Sbjct: 234 IRDVDMAKEMMNFTKTNILTQAAQAMLAQANQAPQGVLQLLR 275
>gi|319787113|ref|YP_004146588.1| flagellin domain protein [Pseudoxanthomonas suwonensis 11-1]
gi|317465625|gb|ADV27357.1| flagellin domain protein [Pseudoxanthomonas suwonensis 11-1]
Length = 277
Score = 117 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 74/187 (39%), Gaps = 3/187 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++A + L + +L R+SSGLR++ A D+AA +I+Q M + +
Sbjct: 4 VINTNVMSLNAQRNLSTNSASLATSIQRLSSGLRINSAKDDAAGLAISQRMTTQVRGMDQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S A+ + + + + I+ D +++Q E+ QL+ ++
Sbjct: 64 AARNANDGISLAQTAEGALQEISNNLQRIRELAVQAANGTNSDEDKQALQKEVQQLKDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ + FNG+ L S A + I + +V +
Sbjct: 124 TRVVDNTKFNGKQLLNASGTISIQVGANATDNDKIDITLNDISSALSGITASAFSVSGMA 183
Query: 180 STDGTER 186
+ G +
Sbjct: 184 AGSGATQ 190
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 37/87 (42%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ +D ++ A +G+I +R +++ + + R+ DAD A E+ L+
Sbjct: 191 LDDLDDALQSVNEARADLGAIQNRFSSAIANLQVSSENMAASRSRIQDADYAKETAELTR 250
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q Q LS + +LSL +
Sbjct: 251 NQILTQAGTAMLSQAKSVPQNVLSLLQ 277
>gi|332526960|ref|ZP_08403049.1| flagellin domain-containing protein [Rubrivivax benzoatilyticus
JA2]
gi|332111399|gb|EGJ11382.1| flagellin domain-containing protein [Rubrivivax benzoatilyticus
JA2]
Length = 285
Score = 117 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 38/212 (17%), Positives = 81/212 (38%), Gaps = 3/212 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I TN ++++A + L +L R+SSGLRV+ A D+AA +IA+ M + ++
Sbjct: 4 TINTNLASLNAQRSLSASQGSLATSMARLSSGLRVNSAKDDAAGLAIAERMNAQVRGMNV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S +A+ ++K D + ++ D S+Q E +LQ+++
Sbjct: 64 AIRNANDGISYAQVAEGALAKIGDSLQRMRELAVQSRNSTNTAKDQDSLQKEFFELQTEV 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ + G++FN + S + + D T +
Sbjct: 124 KRVLGGTTFNEKPVFGQTTDMSFQVGPNTTDDDVVTVRIAAAFSANADLGAVTTTSSVIG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
++ L + + + +++
Sbjct: 184 TSGALTSAADLKTVIDNIDKALNTVNNERAMW 215
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 53/154 (34%)
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
T + + T+ + R ++ VT + + A
Sbjct: 131 TFNEKPVFGQTTDMSFQVGPNTTDDDVVTVRIAAAFSANADLGAVTTTSSVIGTSGALTS 190
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
++ ++ ID + G+ +R +++ + R++DAD A+
Sbjct: 191 AADLKTVIDNIDKALNTVNNERAMWGATQNRFEAVISNLQISVENQSAARSRIMDADFAA 250
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ +S Q QQ ++ N ++LSL +
Sbjct: 251 ETANMSRAQILQQAGNAMVAQANQLPQQVLSLLQ 284
>gi|289812580|ref|ZP_06543209.1| flagellin [Salmonella enterica subsp. enterica serovar Typhi str.
AG3]
Length = 135
Score = 117 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 41/121 (33%)
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
S + + R E + ID + +G++ +R +
Sbjct: 15 ATDGKTYLASDLDKHNFRTGGELKEVNTDKTENPLQKIDAALAQVDTLRSDLGAVQNRFN 74
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + R+ D+D A+E + +S Q QQ L+ N +LSL
Sbjct: 75 SAITNLGNTVNNLSSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLL 134
Query: 451 R 451
R
Sbjct: 135 R 135
>gi|153834461|ref|ZP_01987128.1| polar flagellin E [Vibrio harveyi HY01]
gi|148869157|gb|EDL68189.1| polar flagellin E [Vibrio harveyi HY01]
Length = 374
Score = 117 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 71/183 (38%), Gaps = 3/183 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN +AM + L Q ++SG R++ A+D+AA I+ + L
Sbjct: 1 MVSLNTNVTAMMTQRHLSHAAEQNIESQRNLTSGYRINSASDDAAGLQISNTLNVQTRGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQS 117
S A+ + ++ D++ +++ G +D +SIQ E+ LQ
Sbjct: 61 DVALRNAHDAYSVAQTAEGALHESSDILQRLRSLGLQAANGSNDSSDRQSIQYEVVALQD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L +A ++F +N GS + I + + N + I + +
Sbjct: 121 ELDRVAITTTFADKNLFDGSYGSQSFHIGANANSISLTLRNMRSHIPDMGGQHYVGDAVD 180
Query: 178 DSS 180
Sbjct: 181 KDW 183
Score = 89.8 bits (220), Expect = 9e-16, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 38/100 (38%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + + + ID IK + +IG +R+ D + + +V + GR+
Sbjct: 274 DDIDMSTAGGAQLSIGVIDAAIKYVDSHRSEIGGFQNRVSGTMDNLNTVNRSVTESKGRI 333
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D D A EST + Q Q L+ + L L
Sbjct: 334 RDTDFARESTEMVRSQVLQDATTALLAQAKQRPSSALGLL 373
>gi|109899390|ref|YP_662645.1| flagellin-like [Pseudoalteromonas atlantica T6c]
gi|109701671|gb|ABG41591.1| flagellin-like protein [Pseudoalteromonas atlantica T6c]
Length = 274
Score = 117 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 65/160 (40%), Gaps = 3/160 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN ++++A ++L + +L +R+SSG R++ AAD+AA I+ + + L
Sbjct: 5 VNTNVASLNAQRQLFNSGASLNTSFERLSSGFRINRAADDAAGLQISDRLTTQIQGLDQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ S A+ + + + I+ D ++Q E++ L+S++
Sbjct: 65 ARNANDAISLAQTAEGALGEVTSSLQRIRQLAVQSQNGINSDADRGALQKEVSALKSEIT 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
I+ + F + L +S A +
Sbjct: 125 RISTDTQFGTTDILDGTFSASFLVGANGNQNISVNLSRND 164
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ + S + + + ++ + ++ ++ I
Sbjct: 134 TTDILDGTFSASFLVGANGNQNISVNLSRNDGFGATGLSIDSVDVATVDGASAALTAISE 193
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
I +G++ +R + + + + R+ D D A+E+ L+ Q QQ
Sbjct: 194 AISVVGGVRADLGAVQNRFQSTIRNLSNISENISSARSRIRDTDFAAETAELTRNQIIQQ 253
Query: 431 LAVQALSIVNNSTARILSLF 450
++ LS N + LSL
Sbjct: 254 ASLSVLSQANQAPQTALSLL 273
>gi|332162888|ref|YP_004299465.1| putative flagellin FlaA [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325667119|gb|ADZ43763.1| Putative flagellin FlaA [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
Length = 430
Score = 117 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 56/452 (12%), Positives = 123/452 (27%), Gaps = 27/452 (5%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI A A++ L ++S+GLR+ A D+AA IA + + +
Sbjct: 3 LSINDQSQAFIAAKALNKSQNMYNKSTSQLSTGLRILSAKDDAAGSQIAAGLNAAITGQN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
S+ ++ A ++ + +++ +K T D ++ +E L +
Sbjct: 63 VALRNNSQSSAMLEAANGALAGSDGILNRMKELATQAANATNGAEDRAALNAEFKSLGEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L+ ++F D
Sbjct: 123 LQSTLEKTTFGDGTLFAAGG------------------------KLDGKLTFQAGASATD 158
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + + + + + + A T
Sbjct: 159 VIEIDLSKGVKGLMDTVAGTATVGNAAANTGTIEKAVGEAEAAIATKVGDVKNAETAVKT 218
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
QA A I A + A A + ATT N+
Sbjct: 219 AQQAFDSAFINAKNNAPTLDKAVFGQMDHASESWNQAKADLLGKAFYADQGAATTANAAA 278
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
++ V D ++ + + + + ++
Sbjct: 279 GTYVLGTDKMSNDAVVEVAVKGVDAPKKDLADAESKLQNIKDHDSRYRSAGIVSLNLDDT 338
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+ +E ++ + I ++ + + +R+ D + MRD +++AD +
Sbjct: 339 KSAQEAITTLTKAIGSYSSVTASLAAGINRLGYSSDNLTNMRDGNMAAKDSIMNADAVAA 398
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLF 450
ST + ++ALS + LF
Sbjct: 399 STAQNTAMLLMNSGIKALSKNTQMGQMVAQLF 430
>gi|284810832|gb|ADB96211.1| FliC3 [Yersinia enterocolitica]
Length = 369
Score = 117 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 72/209 (34%), Gaps = 3/209 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + + +
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTATDSSYDFQVGSKDNEQISIAIGKSSGWNLATANADGTS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
S + + K
Sbjct: 181 SDSVNTYAFTKTAALDTKQAAYDTANGAY 209
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 45/358 (12%), Positives = 98/358 (27%)
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+ + S E ++ ++ T + A++
Sbjct: 12 LTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGLTVAARNANDGI 71
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ + I+ L L + + + +D + + D
Sbjct: 72 SLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRMEEINRVTKQTDF 131
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+G +S + + + I A A T+S + + + +
Sbjct: 132 NGIKVLDNRTATDSSYDFQVGSKDNEQISIAIGKSSGWNLATANADGTSSDSVNTYAFTK 191
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
A+ + + G T + K D + D+
Sbjct: 192 TAALDTKQAAYDTANGAYLAAVKADATNGTTTAAALKGAADTATTDLATAVKDATAVNEA 251
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
++ T A + K ++ ID +K +G+ +R
Sbjct: 252 VNGKSRTVAAKGFDVLNGTVAADGKATGTTPLADIDKALKAVDTQRSVLGASQNRFESTI 311
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + R+ DAD ++E + +S Q QQ L+ N +LSL R
Sbjct: 312 TNLNNTVNNLTSARSRIQDADYSTEVSNMSRAQILQQAGTSVLAQANQVPQTVLSLLR 369
>gi|332305627|ref|YP_004433478.1| flagellin domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332172956|gb|AEE22210.1| flagellin domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 274
Score = 117 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 3/160 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +++A ++L + +L +R+SSG R++ AAD+AA I+ + + L
Sbjct: 5 VNTNVPSLNAQRQLFNSGASLNTSFERLSSGFRINRAADDAAGLQISDRLTTQIQGLDQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ S A+ + + + I+ D ++Q E++ L+S++
Sbjct: 65 ARNANDAISLAQTAEGALGEVTSSLQRIRQLAVQSQNGINSDADRAALQKEVSALKSEIT 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
I+ + F + L +S A +
Sbjct: 125 RISTDTQFGTTDILVGTFSASFLVGANGNQNISVNLSRND 164
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 48/140 (34%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ + S + + + ++ + + + + ++ I
Sbjct: 134 TTDILVGTFSASFLVGANGNQNISVNLSRNDGFGAAGLNIDNLNVDTVDGASAALTAISE 193
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
I +G++ +R + + + + R+ D D A+E+ L+ Q QQ
Sbjct: 194 AISVVGGVRADLGALQNRFQSTIRNLSNISENISSARSRIRDTDFAAETAELTRNQIIQQ 253
Query: 431 LAVQALSIVNNSTARILSLF 450
++ LS N + LSL
Sbjct: 254 ASLSVLSQANQAPQTALSLL 273
>gi|170791561|gb|ACB38422.1| flagellin A [Aeromonas caviae]
Length = 302
Score = 117 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + + +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNMMNSTKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E+ QL +++
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSDKDRAALQKEVNQLGAEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
I+ ++F G L + + A +
Sbjct: 125 RISTSTTFAGTKLLDGNFSGTFQVGADANQT 155
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 30/238 (12%), Positives = 73/238 (30%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ LA T+ + + + +A + +
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSDKDRAALQKEVNQLGAEIN 124
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+T + + + + V + + + + + +L
Sbjct: 125 RISTSTTFAGTKLLDGNFSGTFQVGADANQTIGFSLVQSGGFSISGIAKAAGTDVNLGTV 184
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
I + M T+ + + +++ D ++ + ++G++ +R+
Sbjct: 185 IGTSIDMTTIFGGGADGDINIGTQADAQAVLAATDLMLEIVDSKRAELGAVQNRLDSTIR 244
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + V R+ DAD A+E+ ++ QQ A LS N LSL +G
Sbjct: 245 NQANISENVSAARSRIRDADFATETANMTKQNILQQAASSILSQANQRPQSALSLLQG 302
>gi|10281487|gb|AAG15516.1|AF095238_1 flagellin subunit FliC [Clostridium difficile]
Length = 281
Score = 117 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN SA+ A+ ++ +++SSGLR+ AAD+AA +I++ M++ L
Sbjct: 3 VNTNVSALIANNQMGRNVSGQSKSMEKLSSGLRIKRAADDAAGLAISEKMRAQLKGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ G S V A+ + + ++++ ++ + I E+ QL+S++
Sbjct: 63 GRNVQDGISVVQTAEGALEETGNILTRMRTLAVQASNETNSKDERAKIAGEMEQLRSEVD 122
Query: 121 DIARGSSFNGENWLRTD 137
IA + FNGEN L +D
Sbjct: 123 RIADSTKFNGENLLSSD 139
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 40/93 (43%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
A +M+ +D+ + +A +G+ +R+ ++ + + V R+ D D+AS
Sbjct: 188 TEAASKMIVNLDSSLADINSARALLGAQQNRLESTQNNLNNTVENVTAAESRIRDTDVAS 247
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
E LS + Q + LS N +L L
Sbjct: 248 EMVNLSKMNILVQASQSMLSQANQQPQGVLQLL 280
>gi|326790150|ref|YP_004307971.1| flagellin domain protein [Clostridium lentocellum DSM 5427]
gi|326540914|gb|ADZ82773.1| flagellin domain protein [Clostridium lentocellum DSM 5427]
Length = 271
Score = 117 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN SA+ L N + +R+SSGLR++ AAD+AA +I++ M + L
Sbjct: 3 INTNMSAIRTLTSLTKANGSASKAMERLSSGLRINSAADDAAGMAISRKMNTQVKGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ G S + A+ + + ++ ++ D ++I+ EI QL ++
Sbjct: 63 NRNAMDGISMIQTAEGALDEVHSMLQRMRELSVQASNGTYENADRETIEQEINQLMQEME 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
+ + FN N L + T I +
Sbjct: 123 AMKERTQFNKMNLLDGSYENFTLHIGANKDQ 153
Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 50/158 (31%)
Query: 293 TKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANT 352
+ + + + + + +
Sbjct: 112 QEINQLMQEMEAMKERTQFNKMNLLDGSYENFTLHIGANKDQCMNIDGEEISIENILTPL 171
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
+ +E + +D I+ +A G++G+ +R+ I++ + + + R+ D
Sbjct: 172 QGIDIVTKADEAIQKVDAAIEKTSAIRGRLGAYQNRLEHTVSNIQVSEENMTASMSRIQD 231
Query: 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
ADMA E T + Q A L+ N ++L L
Sbjct: 232 ADMAEEMTDYTQYNVISQAATAMLAQANQRPQQVLQLL 269
>gi|189164096|gb|ABU96037.2| flagellin [Bacillus thuringiensis serovar kenyae]
Length = 367
Score = 117 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M+S G L+
Sbjct: 3 INTNINSMRTQEYMRQNQAKMSNSMDRLSSGKRINNASDDAAGLAIATRMRSREGGLNVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S + A + ++ +++ +++ + ++Q E QL+ Q++
Sbjct: 63 ARNTEDGMSLIRTADSALNSVSNILLRMRDLANQSASGTNTDKNQAAMQKEFDQLKEQIQ 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGS 152
IA + FN + L + S +
Sbjct: 123 YIADNTEFNDKKLLDGSNSTINIQALDSHDKN 154
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 30/308 (9%), Positives = 85/308 (27%)
Query: 144 SIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
++A + + L + + + + +
Sbjct: 60 NVAARNTEDGMSLIRTADSALNSVSNILLRMRDLANQSASGTNTDKNQAAMQKEFDQLKE 119
Query: 204 KDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTS 263
+ ++ +T + L + + + + + ++
Sbjct: 120 QIQYIADNTEFNDKKLLDGSNSTINIQALDSHDKNKQITISLDSASLKNLDIKDLAIGSA 179
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
+ + + S + +D V A + S ++
Sbjct: 180 TINQTDLDTATNSMKRLATPATDGKVLAQDIADAKAAFNKVQSAYTPAEVDKIQDAFKAY 239
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+ K+ D + +N K V ID I+ ++ +G
Sbjct: 240 DKLAADPASKDTDIADAAKNVNTVFGTLATPTATKFDPSSAVEKIDKAIETIASSRATLG 299
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
+ +R+ +K +++ ++ DADMA E + ++ + + + LS N +
Sbjct: 300 ATLNRLDFNVTNLKSQENSMAASASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTP 359
Query: 444 ARILSLFR 451
+ L +
Sbjct: 360 QMVSKLLQ 367
>gi|68533179|dbj|BAE06137.1| flagellin [Campylobacter lari]
Length = 572
Score = 117 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 73/198 (36%), Gaps = 3/198 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN AM+A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGAMNAHANSTITARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKVKATQAAQDGQSAKTRNMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + + + + + + S
Sbjct: 125 NIANTTAFNGKQLLSGNFVNQEFQLGAQSNQTVKASIGPTQSSKIGVTRFETGSQAKSSG 184
Query: 181 TDGTERYGLLDRNHKIKV 198
+
Sbjct: 185 IAQLTIKNYNGVDDFKFQ 202
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 42/116 (36%)
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
V+ NI + T ++ ++T A IG++ ++I +
Sbjct: 457 QFANFAVSANIAANDQTPGVTTLKGAMAVMDIVETATANLDAIRADIGAVQNQITATLNN 516
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
I + + ++ + D D A+ES S Q A+S N +L L +
Sbjct: 517 ISVTQVNIKSAESNIRDVDFAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 572
>gi|325288768|ref|YP_004264949.1| flagellin domain protein [Syntrophobotulus glycolicus DSM 8271]
gi|324964169|gb|ADY54948.1| flagellin domain protein [Syntrophobotulus glycolicus DSM 8271]
Length = 273
Score = 117 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 38/257 (14%), Positives = 94/257 (36%), Gaps = 4/257 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN ++++ + L + N ++ +++SSG R++ AAD+AA +I++ MK+ L+
Sbjct: 3 LNTNIASLNTQRNLFNTNNAMQKSLEKLSSGYRINRAADDAAGLAISETMKAQINGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK----SIQSEITQLQSQL 119
G S + A+ +++ ++ + DS +IQ E+ L +++
Sbjct: 63 KRNAQDGISLIQTAEGALNETHSILQRLNELANQAANGTYDSTTDLANIQKEVDSLLTEI 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FNG++ + + G+ T I + + S
Sbjct: 123 THIATSTKFNGKSLISSTGGTITLQIGATSASADQMAITLTSADVGALSVSSLSLSTQAS 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ ++ ++ + + + +++ A + + A
Sbjct: 183 ALSAIDKISDGIKSVSTQRAVLGAYQNRLEHTINNLGTTSENLSAANSRIRDVDMAAEMS 242
Query: 240 DQAKGIATIPVPLPAAP 256
+ K +
Sbjct: 243 EFTKSQVLNQAGVAMLA 259
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 55/182 (30%)
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ A+ ++ + +T ST + T
Sbjct: 91 NELANQAANGTYDSTTDLANIQKEVDSLLTEITHIATSTKFNGKSLISSTGGTITLQIGA 150
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ + ++ + + + + + I IK + +G+ +R
Sbjct: 151 TSASADQMAITLTSADVGALSVSSLSLSTQASALSAIDKISDGIKSVSTQRAVLGAYQNR 210
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + + R+ D DMA+E + + Q Q V L+ N + IL
Sbjct: 211 LEHTINNLGTTSENLSAANSRIRDVDMAAEMSEFTKSQVLNQAGVAMLAQANQAPQSILK 270
Query: 449 LF 450
L
Sbjct: 271 LL 272
>gi|331673441|ref|ZP_08374209.1| flagellin [Escherichia coli TA280]
gi|320194364|gb|EFW68995.1| Flagellar biosynthesis protein FliC [Escherichia coli WV_060327]
gi|331069639|gb|EGI41026.1| flagellin [Escherichia coli TA280]
Length = 545
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 3/154 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
++ + FNG N L D A
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTIT 157
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 78/291 (26%)
Query: 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKK 221
T Y D ++ + I Q + D +S
Sbjct: 255 TSNTFSYTADGVNQTNAAANLIPAAGKTTAASVTIGGTAQNVNIDDSGNITSSDGDQLYL 314
Query: 222 FKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR 281
+ N T T ++ +
Sbjct: 315 DSTGNLTKNQAGNPNKATVSGLLGNTDAKGTAVKTTIKTEAGVTVTAEGNTGTVKIEGAT 374
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
+ S A + N+ + + + ++ T+ + + +
Sbjct: 375 VSASAFTGIAYSANTGGNTYAVAANNTTNGFLAGDDLTQDAQTVSTYYSQADGTVTNSAG 434
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ N+ + ++ +D I +G+I +R+ +
Sbjct: 435 KEIYKDADGVYSTENKTSKTSDPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNLNNTTT 494
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 495 NLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 545
>gi|114054937|gb|ABI50068.1| FlaA [Clostridium botulinum]
Length = 260
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 67/173 (38%), Gaps = 3/173 (1%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+A + + +++SSGLR++ A D+AA +I++ M+ L S
Sbjct: 1 NAXRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQASRNSQDSI 60
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSF 128
S + A+ +++ ++ ++ G D +I++EIT+L +++ I++ + F
Sbjct: 61 SLIQTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEINRISQQTEF 120
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
N + L I + + T + + +
Sbjct: 121 NTQKLLSGGFKDKNFQIGANKAQTIKLTIGDMSAKTLGVSGVSVSDASKATDS 173
Score = 87.9 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 42/113 (37%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 148 TIGDMSAKTLGVSGVSVSDASKATDSIATIDKALGTVSTERAKLGANQNRLEHTINNLNT 207
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA E S Q A L+ N + +L L R
Sbjct: 208 SSENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLLR 260
>gi|170791581|gb|ACB38432.1| flagellin A [Aeromonas salmonicida subsp. salmonicida]
gi|170791583|gb|ACB38433.1| flagellin A [Aeromonas salmonicida subsp. salmonicida]
Length = 305
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 40/205 (19%), Positives = 75/205 (36%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + N +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNLMNTNKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQVNGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E TQL +++
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYTQLMTEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A+ ++F G+N L S A + R V ++
Sbjct: 125 RVAKDTTFGGQNLLSGGYVGSFQVGADAAQTITFRMTTAFTISGMASATKGNAVVAATTA 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ V
Sbjct: 185 GSKEPYKVTPSTTGNVAVADMNSIT 209
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 52/138 (37%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
T+ + + + + T A+ ++ + + ++ +D IK
Sbjct: 168 GMASATKGNAVVAATTAGSKEPYKVTPSTTGNVAVADMNSITAASSAQSAMANLDFMIKV 227
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ ++G++ +R + + V R+ DAD A+E+ L+ QQ A
Sbjct: 228 VDSKRAELGAVQNRFDSTIRNQANISENVSAARSRIRDADFATETANLTKQNILQQAAST 287
Query: 435 ALSIVNNSTARILSLFRG 452
LS N LSL +G
Sbjct: 288 ILSQANQRPQSALSLLQG 305
>gi|183222557|ref|YP_001840553.1| flagellar hook-associated protein FlgL [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189912592|ref|YP_001964147.1| flagellar hook-associated protein FlgL [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167777268|gb|ABZ95569.1| Endoflagellar hook-filament protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167780979|gb|ABZ99277.1| Flagellar hook-associated protein 3 (HAP3) [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 422
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 40/433 (9%), Positives = 102/433 (23%), Gaps = 29/433 (6%)
Query: 1 MTSILTNHSAMSAS-QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M I TN ++ + L ++ Q ++ +GL++ +D+ + +S
Sbjct: 1 MIRI-TNMMQNNSLVRNLNRHQVAMDETQTQLGTGLKIRKPSDDPGAATNQMYFRSRLNE 59
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQL 119
LS + IG G ++ + K ++ ++ + ++
Sbjct: 60 LSQYEENIGDGYQRLQQVDGVLDKMGEIFQRVRVLTVQAGNGIYQGDKGFELEVAIGKEI 119
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
A+ + + L+
Sbjct: 120 DQ-------------HLRAIVDLANARDATGQPLFGGHVIERPPFEPIESKIKGLQGLEL 166
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
D +++ + + + + A+ ++ F
Sbjct: 167 KNQYVGVEYRGDIGEQLREIEKGEYIPITIPGNKVFWGTNVSVTSKVDNSAFQATSDQKF 226
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
I V + K+ +A I
Sbjct: 227 KIDGVEIHISVGDTIDDVIDKINNAPLEVKASKLAQDNISISSTAPHQIWLEDVDGGTVL 286
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
A ++ T L L + + I
Sbjct: 287 RDIGLIEPSASEPPNNFSKSATVTGLSVFDVLIQLRNDLIQKDQERIGGRD--------- 337
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ +D ++ IG+ +R+ E+ + + + + + + D
Sbjct: 338 -----LGDLDLALENILRHRATIGARMNRLEQHEERVSYDKMYMTELLAKNEGIDFPETI 392
Query: 420 TRLSALQTQQQLA 432
+ L+T A
Sbjct: 393 MNMKWLETIHSYA 405
>gi|14278888|dbj|BAB58980.1| flagellin [Bacillus subtilis]
Length = 308
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 81/206 (39%), Gaps = 3/206 (1%)
Query: 9 SAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
+A++ S++L + + +++SSGLR++ A D+AA +I++ M+S L S
Sbjct: 1 AALNTSRQLNAGSNSAAKNMEKLSSGLRINRAGDDAAGLAISEKMRSQIRGLDMASKNAQ 60
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARG 125
G S + ++ +++ ++ + T +D +Q E+ QL S++ I+
Sbjct: 61 DGISLIQTSEGALNETHSILQRMSELATQAANDTNTDSDRSELQKEMDQLASEVTRISTD 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+ FN + L + T I + + N + + ++ T
Sbjct: 121 TEFNTKKLLDGTAQNLTFQIGANEGQTMSLSINKMDSESLKVGTTYTVSNDQNTLTSTDG 180
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ + + +V K
Sbjct: 181 KSTATWADEVTDPDGKVTKAAGYYDT 206
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 37/124 (29%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
T + + + D + A ++ I T
Sbjct: 185 TWADEVTDPDGKVTKAAGYYDTDGKVIASEKLAADSKVTKGIDISSSAKAASSALTTIKT 244
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
I ++ K+G++ +R+ + + + + R+ D DMASE + Q
Sbjct: 245 AIDTVSSERAKLGAVQNRLEHTINNLGTSSENLTSAESRIRDVDMASEMMEYTKNNILTQ 304
Query: 431 LAVQ 434
+
Sbjct: 305 ASQA 308
>gi|30721702|gb|AAP34182.1| FliC [Pseudomonas aeruginosa]
Length = 184
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 46/138 (33%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
S + + + + + V ID IK
Sbjct: 47 ADGTTSAVSGVAITDTGSTGAGTAAGTTTFTEANDTVAKIDISTAKGAQSAVLVIDEAIK 106
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + +K + + V GR+ D D A+E+ L+ Q QQ
Sbjct: 107 QIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDFAAETANLTKNQVLQQAGT 166
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 167 AILAQANQLPQSVLSLLR 184
>gi|1888390|emb|CAA72431.1| flagellin [Campylobacter sp.]
Length = 630
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 72/179 (40%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ +R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNANALDKSLNRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKVKATQAAQDGQSTKTRNMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+IA +SFNG+ L + I + + ++ S
Sbjct: 125 NIANTTSFNGKQLLSGGFINQEFQIGAQSNQTIKASIGATQSSKIGVTRFETGANVVQS 183
Score = 96.3 bits (237), Expect = 1e-17, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T IGS+ +++ + + I + + V+ + D D
Sbjct: 534 VTTLKGAMAVMDIAETATINLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVD 593
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A+S N +L L +
Sbjct: 594 FAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 630
>gi|332526961|ref|ZP_08403050.1| flagellin domain-containing protein [Rubrivivax benzoatilyticus
JA2]
gi|332111400|gb|EGJ11383.1| flagellin domain-containing protein [Rubrivivax benzoatilyticus
JA2]
Length = 284
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 81/213 (38%), Gaps = 3/213 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I TN ++++A + L +L R+SSGLRV+ A D+AA +IA+ M + ++
Sbjct: 3 ATINTNIASLNAQRNLTTSQSSLATSMARLSSGLRVNSAKDDAAGLAIAERMNAQIKGMN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S A+ ++K D + ++ D S+Q E +LQ++
Sbjct: 63 VAVRNANDGISWAQTAEGALAKVGDSLQRMRELAVQSRNATNTAKDQDSLQKEFLELQNE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
++ + G++FN + + A + + D T +
Sbjct: 123 VKRVLGGTTFNEQKIFGQTSDLTFQVGANTSGDDVVTVKQAAAFSANADIGAVTSTAAII 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
++ L + + + S++
Sbjct: 183 GTSGSVTSAADLKTVIDNIDKAINTVNNERSMW 215
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/279 (11%), Positives = 78/279 (27%)
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
T + + + L+ A I+ + +
Sbjct: 6 NTNIASLNAQRNLTTSQSSLATSMARLSSGLRVNSAKDDAAGLAIAERMNAQIKGMNVAV 65
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT 292
+ AN A+ + + + S + + + + +
Sbjct: 66 RNANDGISWAQTAEGALAKVGDSLQRMRELAVQSRNATNTAKDQDSLQKEFLELQNEVKR 125
Query: 293 TKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANT 352
T + + + + + ++ ++ VT +
Sbjct: 126 VLGGTTFNEQKIFGQTSDLTFQVGANTSGDDVVTVKQAAAFSANADIGAVTSTAAIIGTS 185
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
+ ++ ++ ID I G+ +R +++ + R++D
Sbjct: 186 GSVTSAADLKTVIDNIDKAINTVNNERSMWGATQNRFEAVISNLQVSIENQSAARSRIMD 245
Query: 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
AD ASE+ +S Q QQ ++ N ++LSL R
Sbjct: 246 ADFASETANMSRAQILQQAGNAMVAQANQLPQQVLSLLR 284
>gi|302875229|ref|YP_003843862.1| flagellin domain-containing protein [Clostridium cellulovorans
743B]
gi|302578086|gb|ADL52098.1| flagellin domain protein [Clostridium cellulovorans 743B]
Length = 274
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A + + N N +++SSGLR++ A D+AA SI++ M++ L+
Sbjct: 3 INHNLNAMNAQRNMGINNGNAAKSMEKLSSGLRINRAGDDAAGLSISEKMRAQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D +I+SE+ L +++
Sbjct: 63 SRNAQDGISLIQTAEGALNETQSILQRMRELAVQASNDTNVAVDRSAIKSELDTLTTEID 122
Query: 121 DIARGSSFNGENWLRTD 137
IA+ + FN +N L
Sbjct: 123 RIAKTTQFNEKNLLTGS 139
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ I++ IK + +G+ +R+ + + ++ R+ D D
Sbjct: 178 VASNGTATAAITSINSAIKTVSTQRSSLGANQNRLEHTIANLDNASENLQAAESRVRDVD 237
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + QQ A LS N + +L L R
Sbjct: 238 MAKEMMSFTKNNILQQAAQAMLSQANQAPQNVLQLLR 274
>gi|307688908|ref|ZP_07631354.1| flagellin domain-containing protein [Clostridium cellulovorans
743B]
Length = 199
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
AM+A + + N +++SSGLR++ A D+A SI++ M++ L+ S
Sbjct: 1 AMNAQRNMSINNGGAAKSMEKLSSGLRINRAGDDAVGLSISEKMRAQIRGLNQASRNAQD 60
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGS 126
G S + A+ +++ ++ ++ D ++I +EI L +++ IA +
Sbjct: 61 GISLIQTAEGALNETQSILQRMRELAVQAANDTNVTIDRQAIGAEIKTLATEINRIASTT 120
Query: 127 SFNGENWLRTDLGSSTASI 145
FN +N L L S +
Sbjct: 121 QFNEKNLLNGSLSSPGTGV 139
>gi|118588726|ref|ZP_01546134.1| hypothetical protein SIAM614_18509 [Stappia aggregata IAM 12614]
gi|118438712|gb|EAV45345.1| hypothetical protein SIAM614_18509 [Stappia aggregata IAM 12614]
Length = 497
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 74/496 (14%), Positives = 153/496 (30%), Gaps = 46/496 (9%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I+ + + L+ + Q R+++GL+V+ A DN + AQ + L
Sbjct: 1 MPDIVLSSAVRDNLLSLKQTADLQSITQTRLATGLKVNTALDNPNSYFTAQSLNDRASDL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQ 118
S + D +G + A G++ ++ + K + K S+ L Q
Sbjct: 61 SNLLDNMGQAVQTIRAADKGITSITKLVESAKAIANQALQTSSEYERKLFTSQYNDLLEQ 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTA--------------------------------SIA 146
+ D+AR SS+ G+N L +
Sbjct: 121 IEDMARDSSYKGKNLLAGAGNELEVIFNEDSTSNLTVNPVDFTDTSLEDGLNLDDLDAGG 180
Query: 147 KSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + ++ + + + ++ + +
Sbjct: 181 TGTSSFNLYSGTTTISLSGLQASSNLTDLADWATGNVVSITDSSGTTNLTVGTDITTVQD 240
Query: 207 DVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTS 266
V + + + + NA + TT S
Sbjct: 241 YVDALNELSGVHATFDEATDSITITSGLDNALYVSKDNTGGGAATDGGDTGGTTTTMTVS 300
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT-- 324
S + ++ + G++ + + + V + ++T
Sbjct: 301 PLSSTATLITSGGFQAGDTITITDGNGFEPASLEIDEETTVSDLVTFINNVKGLDATFSG 360
Query: 325 ----------LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
D + + ++ A + + + I+ +
Sbjct: 361 GSISLIGEVSFDISSSNSDFNRTTLGSTSGTVSLTAAASEFKSDTDINRTLQAINAALDE 420
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
AA +G+ S + ++ DF + + + +E G G L ADM E + ALQT+QQL+
Sbjct: 421 LRNAARSMGTALSTVEIRTDFTQNLINTLEVGAGHLTIADMNEEGANMLALQTRQQLSST 480
Query: 435 ALSIVNNSTARILSLF 450
ALS+ N + +LSLF
Sbjct: 481 ALSLANQADQSVLSLF 496
>gi|284810824|gb|ADB96205.1| FliC3 [Yersinia enterocolitica]
gi|284810828|gb|ADB96208.1| FliC3 [Yersinia enterocolitica]
gi|284810848|gb|ADB96223.1| FliC3 [Yersinia enterocolitica]
gi|284810852|gb|ADB96226.1| FliC3 [Yersinia enterocolitica]
gi|284810856|gb|ADB96229.1| FliC3 [Yersinia enterocolitica]
gi|284810860|gb|ADB96232.1| FliC3 [Yersinia enterocolitica]
Length = 369
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 71/209 (33%), Gaps = 3/209 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + +
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTKTDSSYDFQVGSKDNEQISIAIGASSGWNLATANADGTS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
S + + K
Sbjct: 181 SDSVNTYAFTKTAALDTKQAAYDTANGAY 209
Score = 93.7 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 45/358 (12%), Positives = 98/358 (27%)
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+ + S E ++ ++ T + A++
Sbjct: 12 LTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGLTVAARNANDGI 71
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ + I+ L L + + + +D + + D
Sbjct: 72 SLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRMEEINRVTKQTDF 131
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+G +S + + + I A A T+S + + + +
Sbjct: 132 NGIKVLDNRTKTDSSYDFQVGSKDNEQISIAIGASSGWNLATANADGTSSDSVNTYAFTK 191
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
A+ + + G T + K D + D+
Sbjct: 192 TAALDTKQAAYDTANGAYLAAVKADATNGTTTAAALKGAADTATTDLATAVKDATAVNEA 251
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
++ T A + K ++ ID +K +G+ +R
Sbjct: 252 VNGKSRTVAAKGFDVLNGTVAADGKATGTTPLADIDKALKAVDTQRSVLGASQNRFESTI 311
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + R+ DAD ++E + +S Q QQ L+ N +LSL R
Sbjct: 312 TNLNNTVNNLTSARSRIQDADYSTEVSNMSRAQILQQAGTSVLAQANQVPQTVLSLLR 369
>gi|170791531|gb|ACB38407.1| flagellin A [Aeromonas hydrophila subsp. anaerogenes]
Length = 306
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + + +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNMMNSTKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E+ QL +++
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSDKDRVALQKEVNQLGAEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
I+ ++F G L G A +
Sbjct: 125 RISTATTFAGTKLLDGSFGGVFQVGADADQT 155
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 42/97 (43%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +++++ D ++ ++G++ +R+ + + V R+ DAD
Sbjct: 209 ISTQAGAQKVLAAADAMLEVVDGKRAELGAVQNRLDSTIRNQANISENVSAARSRIRDAD 268
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+E+ ++ QQ A L+ N LSL +
Sbjct: 269 FATETANMTKQNILQQAASSILAQANQRPQSALSLLQ 305
>gi|94311088|ref|YP_584298.1| flagellin-like protein [Cupriavidus metallidurans CH34]
gi|93354940|gb|ABF09029.1| flagellin [Cupriavidus metallidurans CH34]
Length = 629
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 56/373 (15%), Positives = 107/373 (28%), Gaps = 3/373 (0%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I +N A+SAS + + R+SSGLR++ A D+AA +IA M+ L+
Sbjct: 3 LTIASNVLALSASLQAGKAGNAVGDTIRRLSSGLRINSARDDAAGLAIASRMRVQVSGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQ 118
G G S ++ A + + I++ G+ TD+ ++Q+EI +
Sbjct: 63 QARRNAGDGQSMLETASGALDSLSARLQRIRDLSVQGLNGTLSLTDTDAVQAEINANLKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ + + S+FNG L G + + + G D L
Sbjct: 123 IDRLTQQSTFNGLRLLDGSAGMVNLQVGANDSDKLSVNLGGSGFGVNALGLKDFTIAGLP 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ G N I + S + + GA
Sbjct: 183 GTVSGLSVLQGRSTNVMIDSPTTTVHWPAGSTSPNLVRDVSGTIYVQDVDGAGKPTYQQV 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ + A + + + + + + N+ I + +
Sbjct: 243 GYRPTTDTVTGLSDVALSPSGPPVFQSPAAVASRAIGVPSLLDNTNAPIAGASLVQADDG 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ T + D T+ T + A
Sbjct: 303 RYFILKAGNYYQASLGFGTSGTVTAKAADMTSPLTAADFSTLPATVTQTPPVDPAADTVA 362
Query: 359 LAMEEMVSFIDTQ 371
VS +
Sbjct: 363 FQDASGVSLSASA 375
Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/356 (10%), Positives = 91/356 (25%), Gaps = 1/356 (0%)
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
A G S + + L G F + + +
Sbjct: 272 AVASRAIGVPSLLDNTNAPIAGASLVQADDGRYFILKAGNYYQASLGFGTSGTVTAKAAD 331
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
+ +T +D + D + + ++ V +
Sbjct: 332 MTSPLTAADFSTLPATVTQTPPVDPAADTVAFQDASGVSLSASASRLLQRNNGTYVIEVD 391
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
++ A + + +A + + ++T +K
Sbjct: 392 TGGGNFRYYDAALTMSDDGTTRTMTARAVSTTYQSFTDLPSVS-GDSTVTIDPAKVSVNY 450
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ GN + T + V + Y +
Sbjct: 451 TDRNGVTYGNVLGLDASGNYVFNLPQSAKTGTLVTAQDGSQYIRTVNGSEDVLIFYPLTF 510
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + ++ +D + A +G+ +R+ +
Sbjct: 511 TALTDASTNTTVLNVVEAGEGIRLKQPLDPLATLDRALAAVDAQRSLLGAAQNRLDSITN 570
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ ++ R+ DAD A+E ++++A Q Q A L+ N + +LSL
Sbjct: 571 AQQTTATNLDTARSRIEDADYAAEVSKMTAAQIVSQAATAMLAQANQQSQSVLSLL 626
>gi|153951910|ref|YP_001397579.1| flagellin [Campylobacter jejuni subsp. doylei 269.97]
gi|152939356|gb|ABS44097.1| flagellin A [Campylobacter jejuni subsp. doylei 269.97]
Length = 573
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 78/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A + NL+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVGALNAKANADLNSKNLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + +
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSGG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ E + +
Sbjct: 185 KVQFTLKNYNGIDDFKFQEVTISTSVGT 212
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + I + + V+ ++ D D
Sbjct: 477 VTTLKGAMAVMDIAETAIANLDQIRADIGSVQNQVTSTINNITVTQVNVKSAESQIRDVD 536
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ASES S Q A++ N +L L +
Sbjct: 537 FASESANYSKANILAQSGSYAMAQANAVQQNVLRLLQ 573
>gi|149911691|ref|ZP_01900299.1| flagellin [Moritella sp. PE36]
gi|149805221|gb|EDM65238.1| flagellin [Moritella sp. PE36]
Length = 271
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 76/195 (38%), Gaps = 3/195 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN S+++A ++L + + + +R+SSG R++ AAD+AA I ++S L+
Sbjct: 5 VNTNVSSLNAQRQLSNASNEIGKSFERLSSGKRINSAADDAAGLQIGARLESQVNGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S G S A+ + + +++ ++ D ++Q E +L+ ++
Sbjct: 65 SRNANDGISLAQTAEGALDETTNMLQRMRVLSIQSANGSNSAADRDALQLEFGELKEEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ ++F GEN L + A + + + T +
Sbjct: 125 RIAKDTTFGGENLLDGTYDADIQVGADANQTIKLSITSSMGTGGLGVTADTITTAAGAQT 184
Query: 181 TDGTERYGLLDRNHK 195
+ +
Sbjct: 185 AIKNLDSAIASVTNT 199
Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 41/96 (42%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +D+ I T +G+ +R + + + V R+VD D
Sbjct: 176 ITTAAGAQTAIKNLDSAIASVTNTRADLGAKQNRFSSTIRNLTNISENVSASKSRIVDTD 235
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A+ES L+ +Q QQQ A LS N ++ LSL
Sbjct: 236 FAAESANLARVQVQQQAASSMLSQANQTSQVALSLL 271
>gi|117618426|ref|YP_856235.1| flagellin [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117559833|gb|ABK36781.1| flagellin [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 301
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 73/185 (39%), Gaps = 3/185 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + N +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E QL +++
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSSNGSNNTDDRVALQQEYDQLITEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ ++F G+ L + A + + + TV ++
Sbjct: 125 RISEDTTFGGQKLLDGKYKGTFQVGADAGQTISFKMTSAFSIKGIATATKGSATVASTAT 184
Query: 181 TDGTE 185
D
Sbjct: 185 ADKYT 189
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 26/236 (11%), Positives = 60/236 (25%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ +A T+ + + + + +A +
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSSNGSNNTDDRVALQQEYDQLITEID 124
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ G + + +T +
Sbjct: 125 RISEDTTFGGQKLLDGKYKGTFQVGADAGQTISFKMTSAFSIKGIATATKGSATVASTAT 184
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
D + + + ++ +D IK + ++G++ +R
Sbjct: 185 ADKYTVSKLTTAATTTSVSSIKTASGAQLAMANLDFMIKAVDSKRAELGAVQNRFDSTIR 244
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + R+ DAD A+E+ L+ QQ A L+ N LSL
Sbjct: 245 NQSNVSENLSAARSRIRDADFATETANLTKQNILQQAASSILAQANQRPQSALSLL 300
>gi|327441338|dbj|BAK17703.1| flagellin [Solibacillus silvestris StLB046]
Length = 270
Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 69/194 (35%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++ + L N +++SSG +V+ A D+AA +I++ M+ L
Sbjct: 3 IQHNISALNTHRNLTANNAQASKNLEKLSSGYKVNRAGDDAAGLAISEKMRGQIRGLDMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ S + A+ +++ ++ ++ D K++Q E+ L +++
Sbjct: 63 TKNAQDSISLIQTAEGALNETHSILQRMRELAVQSSNDTNVTADRKALQEEVNALSAEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + L + I + + T +S
Sbjct: 123 RIADNTEFNTQKLLNSSFKGKVFHIGANKDQKITLTIGNMQASKLSVANIAISTQGKANS 182
Query: 181 TDGTERYGLLDRNH 194
L +
Sbjct: 183 AITKINTALETVST 196
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 39/101 (38%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
A + + ++ I+T ++ + K+G++ +R+ + + + + R
Sbjct: 169 VANIAISTQGKANSAITKINTALETVSTERSKLGAVQNRLEHTVNNLGATSENLTAAESR 228
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ D DMA E + Q A L+ N +L L
Sbjct: 229 IRDTDMAKEMMGFTKNNILMQAAQSMLAQANQQPQGVLQLL 269
>gi|88596729|ref|ZP_01099966.1| flagellin subunit protein FlaB [Campylobacter jejuni subsp. jejuni
84-25]
gi|88191570|gb|EAQ95542.1| flagellin subunit protein FlaB [Campylobacter jejuni subsp. jejuni
84-25]
Length = 572
Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 91/279 (32%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGGRISTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ K + ++
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGTGLGALAEEINKSADKTGVRATFTVETRGIAAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + G + S
Sbjct: 245 RAGTTSDTFAINGVTIGQVAYEDGDGNGALVAAINSVKD 283
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T IGS+ +++ + + I + + V+ + D D
Sbjct: 476 VTTLKGAMAVMDIAETATTNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVD 535
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A+S N +L L +
Sbjct: 536 FAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 572
>gi|242392308|dbj|BAH80327.1| flagellin [Geobacillus stearothermophilus]
Length = 271
Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats.
Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 4/245 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++L N +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTYRQLTFNNTQAAKNIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ S + A+ +++ ++ ++ D IQ E+ QL S++
Sbjct: 63 AKNSQDAISLIQTAEGALNETHAILQRMRELAVQGANDTNTTIDRDQIQKELNQLISEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN +N L ++T + + + + +
Sbjct: 123 RISNTTQFNTKNLLDG-SLNATFQVGANSGQIINLTIATMNSTSLTVGAANISVANNSLA 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + S + A + + A +
Sbjct: 182 SSSIANIDAAINAVSQERSKLGALQNRLEYTINNLSTSAENLTAAESRIRDVDMAKEMME 241
Query: 241 QAKGI 245
K
Sbjct: 242 FTKNN 246
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 54/176 (30%)
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
D N + S+ ++T +T
Sbjct: 96 QGANDTNTTIDRDQIQKELNQLISEIDRISNTTQFNTKNLLDGSLNATFQVGANSGQIIN 155
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
+ +M + ++T A + ++ ID I + K+G++ +R+ +
Sbjct: 156 LTIATMNSTSLTVGAANISVANNSLASSSIANIDAAINAVSQERSKLGALQNRLEYTINN 215
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + R+ D DMA E + Q A L+ N +L L R
Sbjct: 216 LSTSAENLTAAESRIRDVDMAKEMMEFTKNNILMQAAQAMLAQANQQPQGVLQLLR 271
>gi|332994150|gb|AEF04205.1| flagellin-like protein [Alteromonas sp. SN2]
Length = 279
Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN S+++A ++L D++ L +R+SSG R++ AAD+AA I+ + S L+
Sbjct: 5 VNTNVSSLNAQRQLFDVSDKLNTSFERLSSGFRINSAADDAAGLQISDRLTSQVEGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
S A+ +S+ + I+ D ++Q E++ L++++
Sbjct: 65 VRNANDAISLSQTAEGALSEVTSSLQRIRQLAVQSQNGINSSADRLALQKEVSALRTEIS 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + F L + A
Sbjct: 125 RIATDTQFGSVKILDGSFSAKFLVGAN 151
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 41/100 (41%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
T++ ++S +D I A +G++ +R + + + + ++
Sbjct: 179 TTNSVATADGASSLLSDVDAAISGIGAVRADLGALQNRFQSTIRNLSNISENLSSARSQI 238
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D D ASE+ L+ Q QQ ++ LS N LSL
Sbjct: 239 RDTDFASETADLTRNQIIQQASISVLSQANQRPQTALSLL 278
>gi|169826619|ref|YP_001696777.1| flagellin [Lysinibacillus sphaericus C3-41]
gi|168991107|gb|ACA38647.1| Flagellin [Lysinibacillus sphaericus C3-41]
Length = 276
Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
MS + + R+S+G R++ AAD+ A +I++ M++ L+ + I G
Sbjct: 10 MSILNNMNRHYGAMSKAMLRISTGYRINSAADDPAGLAISEKMRAQIRGLNMAAKNIQDG 69
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSS 127
S V A+ +++ ++ ++ D K + E +L+ +++ I+ +
Sbjct: 70 ISLVQTAEGALNETHAMIQRMRELAVQAANDTLTDEDRKQLDLEFQELKKEIQRISTDTE 129
Query: 128 FNGENWLRTDL 138
FN + L D
Sbjct: 130 FNTKTLLNGDY 140
Score = 93.3 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 40/96 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ +S ++ +K ++ ++G+ +R+ + + ++ R+ DAD
Sbjct: 176 IATRDEADKAISSMEDALKRVSSERSRLGAYQNRLEHAYNANVNTAENLQAAESRIRDAD 235
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+A E + Q Q + L++ IL L
Sbjct: 236 IAKEMMNMVKAQILMQASQYVLAMHMQQAQSILKLL 271
>gi|170682489|ref|YP_001743319.1| flagellin [Escherichia coli SMS-3-5]
gi|170520207|gb|ACB18385.1| flagellin FliC [Escherichia coli SMS-3-5]
Length = 545
Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 3/154 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
++ + FNG N L D A
Sbjct: 124 DRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTIT 157
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 78/291 (26%)
Query: 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKK 221
T Y D ++ + I Q + D +S
Sbjct: 255 TSNTFSYTADGVNQTNAAANLIPAAGKTTAASVTIGGTAQNVNIDDSGNITSSDGDQLYL 314
Query: 222 FKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR 281
+ N T T ++ +
Sbjct: 315 DSTGNLTKNQAGNPNKATVSGLLGNTDAKGTAVKTTIKTEAGVTVTAEGNTGTVKIEGAT 374
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
+ S A + N+ + + + ++ T+ + + +
Sbjct: 375 VSASAFTGIAYSANTGGNTYAVAANNTTNGFLAGDALTQDAQTVSTYYSQADGTVTNSAG 434
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ N+ + ++ +D I +G+I +R+ +
Sbjct: 435 KEIYKDADGVYSTENKTSKTSDPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNLNNTTT 494
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + R+ DAD A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 495 NLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 545
>gi|86149963|ref|ZP_01068191.1| flagellin subunit protein FlaB [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|218562947|ref|YP_002344726.1| flagellin [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|9296977|sp|P56964|FLB1_CAMJE RecName: Full=Flagellin B
gi|85839409|gb|EAQ56670.1| flagellin subunit protein FlaB [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|112360653|emb|CAL35450.1| flagellin [Campylobacter jejuni subsp. jejuni NCTC 11168]
Length = 572
Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 91/279 (32%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGGRISSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ K + ++
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGTGLGALAEEINKSADKTGVRATFTVETRGIAAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + G + S
Sbjct: 245 RAGTTSDTFAINGVTIGQVAYEDGDGNGALVAAINSVKD 283
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T IGS+ +++ + + I + + V+ + D D
Sbjct: 476 VTTLKGAMAVMDIAETATTNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVD 535
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A+S N +L L +
Sbjct: 536 FAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 572
>gi|237751363|ref|ZP_04581843.1| minor flagellin subunit FlaB [Helicobacter bilis ATCC 43879]
gi|229372729|gb|EEO23120.1| minor flagellin subunit FlaB [Helicobacter bilis ATCC 43879]
Length = 514
Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 75/176 (42%), Gaps = 3/176 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A N + +++SSGLR++ AAD+A+ SIA ++S +L
Sbjct: 5 INTNIAALNAHTIGVQNNRAIANSLEKLSSGLRINKAADDASGMSIADSLRSQASSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ IA M + + ++ T+K K + +++Q++I +L +L
Sbjct: 65 IGNANDAIGMIQIADKAMDEQLKILDTVKVKAIQAAQDGQTTESRRALQNDIVRLLEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+IA +S+NG+ L + I + L+ +V
Sbjct: 125 NIANTTSYNGQQMLSGAFSNKEFQIGAYSNTTVKASIGPTSSDKIGHVRLESSSVT 180
>gi|87200374|ref|YP_497631.1| flagellin-like [Novosphingobium aromaticivorans DSM 12444]
gi|87136055|gb|ABD26797.1| flagellin-like protein [Novosphingobium aromaticivorans DSM 12444]
Length = 327
Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats.
Identities = 40/205 (19%), Positives = 72/205 (35%), Gaps = 3/205 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN SA+ A+ N L +R+S+G R++ A D+AA +I M S +
Sbjct: 1 MAVINTNISAIRATNASNSANKMLGTAMERLSTGKRINGAKDDAAGLAITTTMTSQIRGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQS 117
+ G S A +++ ++ I+ ++QSE+ L
Sbjct: 61 NQGVRNANDGISLAQTADGALNEVTAMLQRIRELAVQAKSGTYQQSDRDAMQSEVANLTQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ D+ FNG G+ + D+ + I T + T++
Sbjct: 121 QISDVFNNVKFNGNQVFSVSDGTGGTGDPTDYSEDNVSIDDAEFVIQTGAEIDNTVTLVS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQV 202
+ + D + V
Sbjct: 181 KAFDGAKLFGVISDGGANDGLAMTV 205
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 26/280 (9%), Positives = 72/280 (25%)
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
T + S G + + + +V+ + K T +
Sbjct: 48 AITTTMTSQIRGMNQGVRNANDGISLAQTADGALNEVTAMLQRIRELAVQAKSGTYQQSD 107
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
A + + + + + + +V
Sbjct: 108 RDAMQSEVANLTQQISDVFNNVKFNGNQVFSVSDGTGGTGDPTDYSEDNVSIDDAEFVIQ 167
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
T + + + + L D T +
Sbjct: 168 TGAEIDNTVTLVSKAFDGAKLFGVISDGGANDGLAMTVYDDSTYDDDSDTTTPEVPVVTQ 227
Query: 352 TDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ + +D+ + + +G+ +R+ + + + R++
Sbjct: 228 ALDVSTSANASTTIENVDSVLASINSTRAGLGAGQNRLESVINNLNDNVTNLSDARSRIM 287
Query: 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D D ++E+T ++ Q Q + ++ N + +LSL +
Sbjct: 288 DTDYSAETTAMAKAQILSQASTAMIAQANQAQQNVLSLLK 327
>gi|68533185|dbj|BAE06142.1| Flagellin [Campylobacter lari]
Length = 567
Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 73/198 (36%), Gaps = 3/198 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN AM+A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGAMNAHANSTITARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKVKATQAAQDGQSTKTRNMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + + + + + + DS
Sbjct: 125 NIANTTAFNGKQLLSGNFINQEFQLGAQSNQTVKASIGPTQSSKIGVTRFETGSQAKDSG 184
Query: 181 TDGTERYGLLDRNHKIKV 198
+
Sbjct: 185 IAQLTIKNYNGVDDFKFQ 202
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 42/121 (34%)
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
++NI + T ++ ++T A IG++ ++I
Sbjct: 447 GGGNSQFANFKASMNIAANDQTPGVTTLKGAMAVMDIVETATANLDAIRADIGAVQNQIT 506
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ I + + ++ + D D A+ES S Q A+S N +L L
Sbjct: 507 ATLNNISVTQVNIKSAESNIRDVDFAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLL 566
Query: 451 R 451
+
Sbjct: 567 Q 567
>gi|188533566|ref|YP_001907363.1| Flagellin [Erwinia tasmaniensis Et1/99]
gi|188028608|emb|CAO96470.1| Flagellin [Erwinia tasmaniensis Et1/99]
Length = 280
Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 63/186 (33%), Gaps = 3/186 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSG R++ + D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSMERLSSGSRITSSKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S+ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSEINNNLQRVRELTVQSKNGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D A I +D + +
Sbjct: 124 DRVSGQTQFNGVKVLSQDTSMKIQVGANDNETIDINLKKIDSTTLGLDKFTVATKEADGT 183
Query: 180 STDGTE 185
+
Sbjct: 184 TAVTPT 189
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 39/98 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ +D I +G++ +R+ + + R+ DAD
Sbjct: 183 TTAVTPTADPLTTLDKAIASVDKLRSGLGAVQNRLDSAVTNLNNTTTNLSSAQSRIQDAD 242
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 243 YATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 280
>gi|73538914|ref|YP_299281.1| flagellin [Ralstonia eutropha JMP134]
gi|72122251|gb|AAZ64437.1| Flagellin, C-terminal:Flagellin, N-terminal [Ralstonia eutropha
JMP134]
Length = 373
Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats.
Identities = 56/369 (15%), Positives = 111/369 (30%), Gaps = 3/369 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLMTQNNLNASQSSLNTAIQRLSSGLRINSAKDDAAGQAIANRFTANIRGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S + +++ + + I+ G+D S+Q+EI Q ++
Sbjct: 64 AQRNANDGISLAQTTEGALTEVNNNLQRIRELSVQAANGSNSGSDLASVQAEIKQRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L ++ + A I ++ +
Sbjct: 124 DRVSSQTQFNGVKVLASNSKMAVQVGANDGETISIDLKQINATTLGLNTLNVAGPSSAGT 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+T V+ + V V A T + A T
Sbjct: 184 TTPYAYNSANTATGENAVVQGRDNTGASVDVAAADMTFTDANGGTANTLVQDDNGRWFVQ 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A AA T + + S SA + + + +S
Sbjct: 244 NGTDFYAATITVKDAAQGTTTATPTATVTFDSSKPLSAATQNPLAAIDAALSKVDDLRSS 303
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
N + + N V S + +D + + + +
Sbjct: 304 LGAVQNRFDSAIANLGTTVTNLSASRSRIQDADYATEVSNMTRANILQQAGTSVLAQANQ 363
Query: 360 AMEEMVSFI 368
+ ++S +
Sbjct: 364 TTQGVLSLL 372
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 38/92 (41%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + ++ ID + +G++ +R + + R+ DAD A+E
Sbjct: 282 ATQNPLAAIDAALSKVDDLRSSLGAVQNRFDSAIANLGTTVTNLSASRSRIQDADYATEV 341
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ QQ L+ N +T +LSL R
Sbjct: 342 SNMTRANILQQAGTSVLAQANQTTQGVLSLLR 373
>gi|153001464|ref|YP_001367145.1| flagellin domain-containing protein [Shewanella baltica OS185]
gi|160876195|ref|YP_001555511.1| flagellin domain-containing protein [Shewanella baltica OS195]
gi|151366082|gb|ABS09082.1| flagellin domain protein [Shewanella baltica OS185]
gi|160861717|gb|ABX50251.1| flagellin domain protein [Shewanella baltica OS195]
gi|315268385|gb|ADT95238.1| flagellin domain protein [Shewanella baltica OS678]
Length = 272
Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 75/182 (41%), Gaps = 3/182 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M A + L L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSMKAQKNLNTSGNALATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S +A+ M + +++ +++ +D +++Q+EI QL S++
Sbjct: 64 GMRNANDGISVAQVAEGAMQEQTNMLQRMRDLAVQSVNGANSTSDKEALQAEIDQLTSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ ++F L + + + +G T L + S
Sbjct: 124 TAISNSTAFGDTKLLSGGFTGKSFQVGHQEGENISISISGTDATTLGVNALVVSSDTAAS 183
Query: 180 ST 181
+
Sbjct: 184 TA 185
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 37/96 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ A + ID+ +K +G++ +R+ + V R+VD D
Sbjct: 176 VSSDTAASTAIGAIDSALKLIDTQRATLGAVQNRLAHNISNSANTQSNVADAKSRIVDVD 235
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A E+ +++ Q QQ L+ N LSL
Sbjct: 236 FAKETAQMTKNQVLQQTGSSMLAQANQLPQVALSLL 271
>gi|145299589|ref|YP_001142430.1| flagellin B [Aeromonas salmonicida subsp. salmonicida A449]
gi|2384650|gb|AAC45643.1| flagellin protein [Aeromonas salmonicida]
gi|142852361|gb|ABO90682.1| flagellin B [Aeromonas salmonicida subsp. salmonicida A449]
Length = 303
Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 72/202 (35%), Gaps = 3/202 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + N +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E QL +++
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYDQLTTEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ ++F G+ L S A + + + TV ++
Sbjct: 125 RISSDTTFGGQKLLDGKYKGSFQVGADAGQTITFKMTSAFTISGIAAASKGSATVAATTA 184
Query: 181 TDGTERYGLLDRNHKIKVEPQV 202
Sbjct: 185 GSKEPYKVTSGTTPVTVANMNS 206
Score = 99.8 bits (246), Expect = 9e-19, Method: Composition-based stats.
Identities = 26/302 (8%), Positives = 67/302 (22%)
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + G D +++ ++ ++
Sbjct: 1 MAMYINTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNG 60
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + + +
Sbjct: 61 LDQGNRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYDQLT 120
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+S T + + +
Sbjct: 121 TEIDRISSDTTFGGQKLLDGKYKGSFQVGADAGQTITFKMTSAFTISGIAAASKGSATVA 180
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ AN ++ + + ++ +D IK + ++G++ +R
Sbjct: 181 ATTAGSKEPYKVTSGTTPVTVANMNSIKAASSAQSAMANLDFMIKAVDSKRAELGAVQNR 240
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + R+ DAD A+E+ L+ QQ A L+ N LS
Sbjct: 241 FDSTIRNQSNVSENLSAARSRIRDADFATETANLTKQNILQQAASSILAQANQRPQSALS 300
Query: 449 LF 450
L
Sbjct: 301 LL 302
>gi|284810845|gb|ADB96221.1| FliC2* [Yersinia enterocolitica]
Length = 374
Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 71/209 (33%), Gaps = 3/209 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + + +
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTATDSSYDFQVGSKDNEQISIAIGKSSGWNLATANADGTS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + +
Sbjct: 181 SDTVNTYKFTTTDAIKTAQTDVTAKNTAY 209
Score = 92.9 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 60/206 (29%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
+ ++ + + A + + +A + T
Sbjct: 169 WNLATANADGTSSDTVNTYKFTTTDAIKTAQTDVTAKNTAYLAAKAISDADPADAAKATA 228
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+T AK + + + ++ A + A +
Sbjct: 229 TTTAKGLLDTSNGTLATAVKTATTAGEAVNGNARTVAAEGFDVLKGQVAADGTAAGTTPL 288
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ ID +K +G+ +R + + + R+ DAD ++E + +S
Sbjct: 289 ADIDKALKAVDTQRSVLGASQNRFESTITNLNNTVNNLTSARSRIQDADYSTEVSNMSRA 348
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ L+ N +LSL R
Sbjct: 349 QILQQAGTSVLAQANQVPQTVLSLLR 374
>gi|42526985|ref|NP_972083.1| flagellar filament core protein [Treponema denticola ATCC 35405]
gi|41817409|gb|AAS11994.1| flagellar filament core protein [Treponema denticola ATCC 35405]
gi|325474047|gb|EGC77235.1| flagellar filament core protein [Treponema denticola F0402]
Length = 286
Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 42/200 (21%), Positives = 78/200 (39%), Gaps = 3/200 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM A + N + +++SSGLR++ A D+A+ ++++ M+S L+
Sbjct: 3 INHNMSAMFAQRTQGVTNVRIGKDIEKLSSGLRINRAGDDASGLAVSEKMRSQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S G + + +A+A + + D+M I+ D IQ E++QL +++
Sbjct: 63 SANASNGINFIQVAEAFLQETTDIMQRIRELAVQASNGIYSAEDRMQIQVEVSQLVAEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG N L T + F N ++ + + +
Sbjct: 123 RIASSAQFNGMNMLTGRFARETGENVVTGSMWFHIGANMDQRMRVYIGTMSAAALGIRDI 182
Query: 181 TDGTERYGLLDRNHKIKVEP 200
D +
Sbjct: 183 GDEKIMTIETADAANRSIGT 202
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 39/99 (39%)
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
A + ID +K +G +R+ L I + + ++ R+ D
Sbjct: 188 MTIETADAANRSIGTIDEGLKKINKQRADLGGYQNRMELTVVGIDIAAENLQAAESRIRD 247
Query: 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ADMA + + Q + L+ NN++ ++SL R
Sbjct: 248 ADMAKQMVEYTKNQILSNTGIAMLAQANNNSQLVMSLLR 286
>gi|311070042|ref|YP_003974965.1| flagellin [Bacillus atrophaeus 1942]
gi|310870559|gb|ADP34034.1| flagellin [Bacillus atrophaeus 1942]
Length = 320
Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++L + + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTYRQLSANSNASQKNMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK----SIQSEITQLQSQL 119
S G S + A+ +++ ++ ++ GT +IQ EI L ++
Sbjct: 63 SKNSQDGISLIQTAEGALTETHSILQRVRELAVQANNTGTQDTTDLGAIQDEIGSLLEEI 122
Query: 120 -------RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157
+ I+ + FNG+N L D S + + + IG+ +
Sbjct: 123 GGVDGASKGISDRTQFNGKNLLNGDFSSKSGNQLQFQIGANDQQT 167
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 40/95 (42%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
K + E +S ID K + K+G++ +R+ + + + + R+ D DMA
Sbjct: 226 TKFSFENQLSAIDAATKQVSTQRSKLGAVQNRLEHTINNLGASSENLTAAESRIRDVDMA 285
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + + Q + L+ N+ +L L +
Sbjct: 286 KEMSEFTKNNILSQASQAMLAQANHQPQSVLQLLQ 320
>gi|189339448|gb|ABD33717.2| flagellin [Bacillus thuringiensis serovar darmstadiensis]
Length = 364
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 8 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + M+ +++ +++ + ++ E L+ Q+
Sbjct: 68 ANNTQDGISLIRTADSAMNSVSNILLRMRDLANQSANGTNTSENQAALDKEFGALKEQIN 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
I+ + FN + L +
Sbjct: 128 YISTNTEFNDKKLLDGSNETIAIQT 152
Score = 90.2 bits (221), Expect = 7e-16, Method: Composition-based stats.
Identities = 35/361 (9%), Positives = 95/361 (26%)
Query: 91 IKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVI 150
+ +I + + ++ ++ + + ++ G N + L +T A+
Sbjct: 4 LNMRINTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESG 63
Query: 151 GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
++ +V + + + + + K+
Sbjct: 64 LGVAANNTQDGISLIRTADSAMNSVSNILLRMRDLANQSANGTNTSENQAALDKEFGALK 123
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
+ + +F + A + + +
Sbjct: 124 EQINYISTNTEFNDKKLLDGSNETIAIQTLDNADEGKKIDIKLANVSTQSLSIDKLTIGG 183
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
S + T K I + KV + D ++ T
Sbjct: 184 ASQKTIDDVAGKFTALNTTTTTDKADIQKEVDAAMKEFDKVKGSMSAADAKAVTDKLADY 243
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
A V+ ID+ ++ + +G+ +R+
Sbjct: 244 NNAADTDVAKAAAAKALGGAFDKTKVTVANPNAAVAAIDSALENIASNRATLGATLNRLD 303
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ +K ++ ++ DADMA E + ++ + + + LS N + + L
Sbjct: 304 FNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLL 363
Query: 451 R 451
+
Sbjct: 364 Q 364
>gi|284926559|gb|ADC28911.1| flagellin [Campylobacter jejuni subsp. jejuni IA3902]
Length = 576
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 93/279 (33%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ K + ++
Sbjct: 185 EVQFTLKNYNGIDDFKFQKVVISTSVGTGLGALADEINKNADKTGVRATFTVETRGMAAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + + G + S S
Sbjct: 245 RAGTTSDDFAINGVKIGKVDYKDGDANGALVSAINSVKD 283
Score = 96.3 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T IGS+ +++ + + I + + V+ + D D
Sbjct: 480 VTTLKGAMAVMDIAETATTNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVD 539
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A+S N +L L +
Sbjct: 540 FAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 576
>gi|315930101|gb|EFV09229.1| Flagellin A [Campylobacter jejuni subsp. jejuni 305]
Length = 370
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 79/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + +
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGT 212
>gi|332298176|ref|YP_004440098.1| flagellin domain protein [Treponema brennaborense DSM 12168]
gi|332181279|gb|AEE16967.1| flagellin domain protein [Treponema brennaborense DSM 12168]
Length = 286
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 82/201 (40%), Gaps = 3/201 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N SAM ++++L N L+ +++SSG++++ A D+A+ ++++ M+S L+
Sbjct: 2 VINHNMSAMYSNRQLGVTNLGLQKDMEKLSSGMKINRAGDDASGLAVSEKMRSQIRGLNQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
S G S + + + + D+M ++ D IQ E++QL +++
Sbjct: 62 ASQNASNGISFIQTTEGYLQETTDIMQRLRELAVQSSNGIYTDEDRMQIQVEVSQLVAEV 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FNG N L T + + N +++ + + +
Sbjct: 122 DRIASTAQFNGMNMLTGRFAQPTGENSVTASMWLHIGANMDQRMSVYIGTMTATALGVRQ 181
Query: 180 STDGTERYGLLDRNHKIKVEP 200
D + + +
Sbjct: 182 LGDESIISLAAPDDANRAIGT 202
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 39/115 (33%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + + + + + ID +K +G +R+ I
Sbjct: 172 MTATALGVRQLGDESIISLAAPDDANRAIGTIDEALKKINKQRADLGGYQNRLDYAVKGI 231
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + ++ R+ D DMA + + Q Q L+ N + +LSL R
Sbjct: 232 DIASENMQASESRIRDTDMAKQMVEFTKNQVLSQAGTAMLAQANTQSQNVLSLLR 286
>gi|253575872|ref|ZP_04853206.1| flagellin [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844666|gb|EES72680.1| flagellin [Paenibacillus sp. oral taxon 786 str. D14]
Length = 271
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A++ L N + +++SSG R++ AAD+AA +I++ M+ L+
Sbjct: 5 INTNVGALNANRNLNFNNTQMGKTMEKLSSGYRINRAADDAAGLAISEKMRFQINGLTQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ I D IQ E+ +L ++
Sbjct: 65 QRNAQDGISLIQTAEGALTEVHSMLQRINTLANQAANGTYDATDRAKIQLEVDELIGEIS 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
+IA +FNG + L++ + + + + K
Sbjct: 125 NIAATVNFNGISLLKSGGSVTFQIGSDANTEISVSLSGMKPSD 167
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 36/81 (44%)
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ I + G++ +R+ + + +M + + R+ DADMA+E T + Q
Sbjct: 190 SAISQVSTQRATFGAVQNRLEHTVNNLGVMVENLSASESRIRDADMATEMTAFTKNQILV 249
Query: 430 QLAVQALSIVNNSTARILSLF 450
Q L+ N++ +L L
Sbjct: 250 QAGTAMLAQANSAPQAVLRLL 270
>gi|3290030|gb|AAC25640.1| flagellin B [Campylobacter jejuni]
Length = 575
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 92/279 (32%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ + + ++
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGTGLGALAEEINKSADQTGVRATFTVETRGMAAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + G + S S
Sbjct: 245 RAGTTSDTFAINGVKIGQVAYEDGDANGALVSAINSVKD 283
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T IGS+ +++ + + I + + V+ + D D
Sbjct: 479 VTTLKGAMAVMDIAETATTNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVD 538
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A+S N +L L +
Sbjct: 539 FAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 575
>gi|306819761|ref|ZP_07453418.1| A-type flagellin [Eubacterium yurii subsp. margaretiae ATCC 43715]
gi|304552196|gb|EFM40130.1| A-type flagellin [Eubacterium yurii subsp. margaretiae ATCC 43715]
Length = 297
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 47/138 (34%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T + + T S + + +++E ++ ID+ I
Sbjct: 160 TVKVITADGTNGFGTVGNKTPDSSVEGKDAWKKDEFVLDISVKDAKSVKETLTKIDSAIS 219
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
++ +G++ +R+ + + + R+ D DMA E + + Q A
Sbjct: 220 TVSSQRSSLGAVQNRLEHTIKNLNNAAENTQAAEARIRDTDMAKEMSTFTKNNVLSQAAQ 279
Query: 434 QALSIVNNSTARILSLFR 451
+S N + L L R
Sbjct: 280 AMISQANQIPNQALQLLR 297
>gi|157691931|ref|YP_001486393.1| flagellin [Bacillus pumilus SAFR-032]
gi|157680689|gb|ABV61833.1| flagellin [Bacillus pumilus SAFR-032]
Length = 300
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 39/97 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
L ++ + +D IK + K+G++ +R+ + + + + R+ D D
Sbjct: 204 ATPTLTFDQQLDIVDGAIKQVSDQRSKLGAVQNRLEHTINNLGASGENLTAAESRIRDVD 263
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + + Q + L+ N +L L R
Sbjct: 264 MAKEMSEFTKNNILSQASQAMLAQANQQPQNVLQLLR 300
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 79/205 (38%), Gaps = 10/205 (4%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ +L N + +++SSGL+++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTLNRLSANNGASQKNMEKLSSGLKINRAGDDAAGLAISEKMRGQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK----SIQSEITQLQSQL 119
S G S + A+ +++ ++ ++ + GT +IQ EI L ++
Sbjct: 63 SKNAQDGISLIQTAEGALTETHSILQRVRELVVQAGNTGTQDDTDLGAIQEEIKNLVQEI 122
Query: 120 ------RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE 173
I+ + FNG+ L TA++ + + + + ++ + D +
Sbjct: 123 GNGTEKNGISDRTEFNGKKLLNGAFADGTATLTFQIGANKAQKLDVNIEAMSSDKIGATQ 182
Query: 174 TVLLDSSTDGTERYGLLDRNHKIKV 198
+ +
Sbjct: 183 ADGTLVTGQAVSNIDVTQFAAATPT 207
>gi|116489822|gb|ABJ98818.1| phase I flagellin middle domain variant C131 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 327
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 70/210 (33%), Gaps = 3/210 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG L D + A I Q +D + +
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ Y V
Sbjct: 184 TAATVTGYADTTIALDNSKTEVVSIGGKTY 213
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 42/136 (30%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ S + + A E + ID +
Sbjct: 192 ADTTIALDNSKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQV 251
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G++ +R + + + + R+ D+D A+E + +S Q QQ
Sbjct: 252 DTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSV 311
Query: 436 LSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 312 LAQANQVPQNVLSLLR 327
>gi|14278896|dbj|BAB58984.1| flagellin [Bacillus subtilis]
Length = 308
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 81/206 (39%), Gaps = 3/206 (1%)
Query: 9 SAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
+A++ S++L + + +++SSGLR++ A D+AA +I++ M+S L S
Sbjct: 1 AALNTSRQLNAGSNSAAKNMEKLSSGLRINRAGDDAAGLAISEKMRSQIRGLDMASKNAQ 60
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARG 125
G S + ++ +++ ++ + T +D +Q E+ QL S++ I+
Sbjct: 61 DGISLIQTSEGALNETHSILQRMSELATQAANDTNTDSDRSELQKEMDQLASEVTRISTD 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+ FN + L + T I + + N + + ++ T
Sbjct: 121 TEFNTKKLLDGTAQNLTFQIGANEGQTMSLSINKMDSESLKVGTTYTVSNDQNTLTSTDG 180
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ + + +V K
Sbjct: 181 KSTATWADEVTDPDGKVTKAAGYYDT 206
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 38/124 (30%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
T + + + TD + A ++ I T
Sbjct: 185 TWADEVTDPDGKVTKAAGYYDTDGKVIASEKLAADSKVTKGTDISSSAKAASSALTTIKT 244
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
I ++ K+G++ +R+ + + + + R+ D DMASE + Q
Sbjct: 245 AIDTVSSERAKLGAVQNRLEHTINNLGTSSENLTSAESRIRDVDMASEMMEYTKNNILTQ 304
Query: 431 LAVQ 434
+
Sbjct: 305 ASQA 308
>gi|88704299|ref|ZP_01102013.1| flagellar hook associated protein type 3 FlgL [Congregibacter
litoralis KT71]
gi|88701350|gb|EAQ98455.1| flagellar hook associated protein type 3 FlgL [Congregibacter
litoralis KT71]
Length = 402
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 47/417 (11%), Positives = 101/417 (24%), Gaps = 53/417 (12%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
+L Q +++G R+ +D+ + ++ D + L ++ + +
Sbjct: 22 QADLARTQQELATGKRIQSPSDDPSGAVKILDLEEDIRLVDQYQRNASLAEGQLAVEETT 81
Query: 81 MSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+S +V+ ++ SI E+ +L +A N E
Sbjct: 82 LSAVNNVLQRVRELTVQANNATQSPETRASIAVEVNARIEELVALANTRDGNDEYLFAG- 140
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ + + + N
Sbjct: 141 -----FQAQTQPFSRQGGTVTYSGDDGQRFLDIAASAQVAVRDSGSRVFLAVDAGNGSFD 195
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
V ++S S + T A T+ A + P
Sbjct: 196 FAADPANTGTAVVAESSADGSFVRDDYTVTFSQATPADPVTYSVTDSSAAVVATGNYTPG 255
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ +G +
Sbjct: 256 DAISFNGARLVIEGT--------------------------------------------P 271
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
D +S TLDS L + + + A+ ++ +D I
Sbjct: 272 EDGDSITLDSAPKQSIFDTLQGIADALENSAGTPSGSAAVNNALASGLNNLDQAIGNVLE 331
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G +RI Q+ + ++ + + D D A ++L+ Q A Q
Sbjct: 332 VQSDVGVRLNRIESQQSINEDFNLQLQTTLSDVQDVDFAEAISKLNLQLVALQAAQQ 388
>gi|170791539|gb|ACB38411.1| flagellin A [Aeromonas jandaei]
Length = 304
Score = 116 bits (289), Expect = 9e-24, Method: Composition-based stats.
Identities = 35/202 (17%), Positives = 72/202 (35%), Gaps = 3/202 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNLMNTTKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQVNGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E QL +++
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYDQLMTEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A+ ++F G+ L + A + + T+ S+
Sbjct: 125 RVAKDTTFGGQQLLNGGYKGTFQVGADAAQTITFKMTTAFTISGMASAAKGSATIAAGST 184
Query: 181 TDGTERYGLLDRNHKIKVEPQV 202
+
Sbjct: 185 GSKEPYKVTASSSAITVTNMNS 206
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/304 (9%), Positives = 68/304 (22%)
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + G D +++ ++ ++
Sbjct: 1 MGLYINTNVSSLNAQRNLMNTTKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQVNG 60
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + +
Sbjct: 61 LDQGNRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYDQLM 120
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
A T T + +
Sbjct: 121 TEIDRVAKDTTFGGQQLLNGGYKGTFQVGADAAQTITFKMTTAFTISGMASAAKGSATIA 180
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ + + N ++ A + ++ +D IK + ++G++ +R
Sbjct: 181 AGSTGSKEPYKVTASSSAITVTNMNSIKSASAAQSAMANLDYMIKVVDSKRAELGAVQNR 240
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + V R+ DAD A+E+ L+ QQ A LS N LS
Sbjct: 241 FDSTIRNQANVSENVSAARSRIRDADFATETANLTKQNILQQAASTILSQANQRPQSALS 300
Query: 449 LFRG 452
L +G
Sbjct: 301 LLQG 304
>gi|332140556|ref|YP_004426294.1| flagellin [Alteromonas macleodii str. 'Deep ecotype']
gi|327550578|gb|AEA97296.1| flagellin [Alteromonas macleodii str. 'Deep ecotype']
Length = 319
Score = 116 bits (289), Expect = 9e-24, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 67/158 (42%), Gaps = 3/158 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN S+++A ++L + +L+ +R+SSGLR++ A D+AA I+ ++ L+
Sbjct: 3 LTVNTNVSSLNAQRQLMNSGNSLDQAFERLSSGLRINSAKDDAAGLQISNRLEGQINGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S A+ + + D ++ D +IQ E+ L +
Sbjct: 63 QGNRNANDGISVAQTAEGALEQVTDSFQRVRTLAAQAANGSNTDADRLAIQDEVRALMEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRD 156
+ I+ ++F GEN L ++
Sbjct: 123 VNRISEDTTFGGENILDGSYNGVFQVGGDAIQTIGFDM 160
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 42/96 (43%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + +++ +D+ I ++G++ +R + + + R+ DAD
Sbjct: 223 VSTQGNAQGVLAGMDSLIAVVDKKRAELGAVQNRFQSTISNQANISENLSAAQSRIKDAD 282
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A+E+ +L+ Q QQ + L+ N LSL
Sbjct: 283 FAAETAKLTQSQILQQASQAILAQANQRPQAALSLL 318
>gi|170791567|gb|ACB38425.1| flagellin A [Aeromonas molluscorum]
Length = 306
Score = 116 bits (289), Expect = 9e-24, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 76/221 (34%), Gaps = 3/221 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + + +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNMMNSTKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQVNGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D +++Q E+ QL +++
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSDKDREALQKEVDQLGAEVN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ ++F G L G + A + + TV + S
Sbjct: 125 RISTATTFAGTKLLDGSFGGTFQVGADANQTIGFSLSQADGFSISGIATAAGTTVNVISG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKK 221
G+ + +
Sbjct: 185 PAGSVSTPTGISAIFAGGSAGGISISSQGNAQQVLAAADAM 225
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 52/137 (37%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
TT++ + + + + A + + + +++++ D ++
Sbjct: 169 SGIATAAGTTVNVISGPAGSVSTPTGISAIFAGGSAGGISISSQGNAQQVLAAADAMLEV 228
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
++G++ +R+ + + V R+ DAD A+E+ ++ QQ A
Sbjct: 229 VDGKRAELGAVQNRLDSTIRNQANISENVSAARSRIRDADFATETANMTKQNILQQAASS 288
Query: 435 ALSIVNNSTARILSLFR 451
L+ N LSL +
Sbjct: 289 ILAQANQRPQSALSLLQ 305
>gi|114054901|gb|ABI50050.1| FlaA [Clostridium botulinum]
Length = 257
Score = 116 bits (289), Expect = 9e-24, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 66/172 (38%), Gaps = 3/172 (1%)
Query: 13 ASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSS 72
A + + +++SSGLR++ A D+AA +I++ M+ L S S
Sbjct: 1 ARRNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQASRNSQDSIS 60
Query: 73 KVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFN 129
+ A+ +++ ++ ++ G D +I++EIT+L +++ I++ + FN
Sbjct: 61 LIQTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEINRISQQTEFN 120
Query: 130 GENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ L I + + T + + +
Sbjct: 121 TQKLLSGGFKDKNFQIGANKAQTIKLXIGDMSAKTLGVSGVSVSDAXXATDS 172
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 41/109 (37%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T + + ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 149 GDMSAKTLGVSGVSVSDAXXATDSIATIDXALGTVSTERAKLGANQNRLEHTINNLNTSS 208
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
+ ++ R+ D DMA E S Q A L+ N + +L L
Sbjct: 209 EXLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQL 257
>gi|227809546|gb|ACP40991.1| flagellin A [Aeromonas caviae]
Length = 303
Score = 116 bits (289), Expect = 9e-24, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 77/212 (36%), Gaps = 3/212 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + N +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNLMNTNKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E TQL +++
Sbjct: 65 NRNANDGISVAQTAEGAMDEITSMLQRMRTLSQQSANGSNNTDDRTALQQEYTQLMTEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+++ ++F G+N L S A + R TV ++
Sbjct: 125 RVSKDTTFGGQNLLNGGYVGSFQVGADAGQTITFRMTTAFSISGMASATKGNATVTTTTT 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYD 212
+ + D
Sbjct: 185 GEPYSVAKNSSGTVTTTSIGSITTAKDAQSAM 216
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 30/238 (12%), Positives = 67/238 (28%)
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + T GA + + + +
Sbjct: 65 NRNANDGISVAQTAEGAMDEITSMLQRMRTLSQQSANGSNNTDDRTALQQEYTQLMTEID 124
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
S G + + + +D G T + + + + + +
Sbjct: 125 RVSKDTTFGGQNLLNGGYVGSFQVGADAGQTITFRMTTAFSISGMASATKGNATVTTTTT 184
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + + + ++ +D IK + ++G++ +R
Sbjct: 185 GEPYSVAKNSSGTVTTTSIGSITTAKDAQSAMANLDYMIKVVDSKRAELGAVQNRFDSTI 244
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + V R+ DAD A+E+ L+ QQ A LS N LSL +
Sbjct: 245 RNQANVSENVSAARSRIRDADFATETANLTKQNILQQAASTILSQANQRPQSALSLLQ 302
>gi|291486089|dbj|BAI87164.1| flagellin [Bacillus subtilis subsp. natto BEST195]
Length = 305
Score = 116 bits (289), Expect = 9e-24, Method: Composition-based stats.
Identities = 25/207 (12%), Positives = 63/207 (30%)
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
TS + A + N + + +
Sbjct: 99 NTGTQDGTDLQAIQDEITSLVEEIGGGTNANGISDRTEFNGKKLLNGDFSQASGKSLTFQ 158
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
+ + +T + + + +G ++ +++T+ + A +
Sbjct: 159 IGANSSQQLSVNIESMAATAIGALDTDGTTLLTGQAVSDIDVTKFKDNAADTATVGFNAQ 218
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ +D I + K+G++ +R+ + + + + R+ D DMA E + +
Sbjct: 219 LKTVDDAINTVSKQRSKLGAVQNRLEHTINNLSASGENLTAAESRIRDVDMAKEMSEFTK 278
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q + L+ N +L L R
Sbjct: 279 NNILSQASQAMLAQANQQPQNVLQLLR 305
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 83/226 (36%), Gaps = 10/226 (4%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ +L N + +++SSGLR++ A D+AA +I++ M+ L
Sbjct: 3 INHNIAALNTLNRLSSNNGASQKNMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLEMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS----KSIQSEITQLQSQL 119
S G S + A+ +++ ++ ++ + GT ++IQ EIT L ++
Sbjct: 63 SKNSQDGISLIQTAEGALTETHSILQRVRELVVQAGNTGTQDGTDLQAIQDEITSLVEEI 122
Query: 120 ------RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE 173
I+ + FNG+ L D ++ IG+ + +
Sbjct: 123 GGGTNANGISDRTEFNGKKLLNGDFSQASGKSLTFQIGANSSQQLSVNIESMAATAIGAL 182
Query: 174 TVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
+ G + K + + I+T
Sbjct: 183 DTDGTTLLTGQAVSDIDVTKFKDNAADTATVGFNAQLKTVDDAINT 228
>gi|291618909|ref|YP_003521651.1| FliC [Pantoea ananatis LMG 20103]
gi|291153939|gb|ADD78523.1| FliC [Pantoea ananatis LMG 20103]
Length = 311
Score = 116 bits (289), Expect = 9e-24, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 75/204 (36%), Gaps = 5/204 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I TN ++ L + +R+SSGLR++ A D+AA +IA + S +
Sbjct: 1 MSVINTNILSLIVQNDLFLSQNAMSTAIERLSSGLRINSAKDDAAGMAIANRLTSRINGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQS 117
+ + G G S A+ + + D + I++ D SIQ+E+ Q
Sbjct: 61 TVATRNAGEGISLSQTAEGALDEINDNLQRIRDLTVQAQNGSNSAADIDSIQTEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLG--SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
++ I + FNG L T G + + D + + + T+
Sbjct: 121 EINRITAQTDFNGIKVLNTGSGASEYRFQVGAEDGETISIDIDSSDRYNLLKAGTTGTTL 180
Query: 176 LLDSSTDGTERYGLLDRNHKIKVE 199
+ T G G +
Sbjct: 181 NVRQMTSGDTVNGAARTVAAEGFD 204
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/257 (12%), Positives = 70/257 (27%)
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
++ + + + + + ++ A +
Sbjct: 54 TSRINGMTVATRNAGEGISLSQTAEGALDEINDNLQRIRDLTVQAQNGSNSAADIDSIQT 113
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
+++ G S+ + ++ T +S +
Sbjct: 114 EVNQRMEEINRITAQTDFNGIKVLNTGSGASEYRFQVGAEDGETISIDIDSSDRYNLLKA 173
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
T + + D + ++ + A T N ++ ID I+
Sbjct: 174 GTTGTTLNVRQMTSGDTVNGAARTVAAEGFDVLKGAVTGGANGTATGNSPLTDIDRAIQF 233
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G+ +R + M + R+ D D A+E + LS Q QQ V
Sbjct: 234 VDTQRSMMGADQNRFQSAIANLGSMVTNLTASRSRIEDVDYATEVSALSQAQILQQAGVA 293
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +L L R
Sbjct: 294 MLAQANQMPQLMLQLLR 310
>gi|134294316|ref|YP_001118051.1| flagellin domain-containing protein [Burkholderia vietnamiensis G4]
gi|134137473|gb|ABO53216.1| flagellin domain protein [Burkholderia vietnamiensis G4]
Length = 614
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/277 (18%), Positives = 99/277 (35%), Gaps = 3/277 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 1 MLGINSNINSLVAQQNLTGSQSALSQAITRLSSGKRINSAADDAAGLAIATGMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S V A +G+S+ + I+ + ++Q E++Q +
Sbjct: 61 NQGVSNANDGVSMVQTATSGLSQITSSLQRIRTLAVQASNGGLSADNRAALQQEVSQQIA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA + +NG+N L GS + + +V + + V +I + + +L
Sbjct: 121 EVNRIASQTQYNGKNILDGSAGSVSFQVGANVGQTVSLSLSQSVSAASIGTGVVSQGTVL 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
S T + + + T + + A
Sbjct: 181 GSMTGLNLTAQGQLNAGTGAAALTSINVLADGKGGFTFTDQNNQALSSAAVTNLFGGATI 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ P A+ T+ + ++ +
Sbjct: 241 NQGTGTPLTLTPQGALTGGASAAQTASIASIQTANAQ 277
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 38/112 (33%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
S+ N + + + ID + +G+ +R +
Sbjct: 502 SSVAANNTPSKVSDINISTTDGANLAIESIDNALATVNNLQANLGAAQNRFTAISTTQQA 561
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ ++ DA+ A E+ LS Q QQ + L+ N+ ++L L
Sbjct: 562 QSTDLSTAQSQIQDANFAQETANLSKAQVLQQAGISVLAQANSLPQQVLKLL 613
>gi|281484883|gb|ADA70306.1| flagellin A [Bacillus thuringiensis serovar berliner]
Length = 414
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 36 INTNINSMRTQDYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 95
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + M+ +++ +++ + ++ E L+ Q+
Sbjct: 96 ANNTQDGMSLIRTADSAMNSVSNILLRMRDISNQSANGTNTDKNQSALDKEFAALKDQID 155
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
I++ + FN + L S
Sbjct: 156 YISKNTEFNDQKLLDGSKKSIAIQT 180
Score = 93.7 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/363 (9%), Positives = 81/363 (22%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
+ K + S+ + + S G T G S A S
Sbjct: 52 NQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADS 111
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ S I+ + E K +D
Sbjct: 112 AMNSVSNILLRMRDISNQSANGTNTDKNQSALDKEFAALKDQIDYISKNTEFNDQKLLDG 171
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
S + + A + + + +
Sbjct: 172 SKKSIAIQTLDNADTNKQIDIQLSNVSTKELKLDTLSIEGSSSKTFTITADDMLAVGTAN 231
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ A + A T + +
Sbjct: 232 ATAKAKAGTLKGLNVTTGDLTAAKTDVQDFRAAFDKVKGFMGSTEVTNIEKALTKFDGDQ 291
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ L T + ++ ID ++ + +G+ +R
Sbjct: 292 SLANAKAIGDALTSDLATTIAKDQTYSKNVSNASSAIASIDAALESIASNRATLGATLNR 351
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + +K ++ ++ DADMA E + ++ + + + LS N + +
Sbjct: 352 LDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSK 411
Query: 449 LFR 451
L +
Sbjct: 412 LLQ 414
>gi|123442753|ref|YP_001006730.1| flagellin [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|122089714|emb|CAL12566.1| flagellin [Yersinia enterocolitica subsp. enterocolitica 8081]
Length = 369
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 35/209 (16%), Positives = 71/209 (33%), Gaps = 3/209 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + +
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTKTDSSYDFQVGSKDNEQISIAIGASSGWNLATANADGTS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + + K
Sbjct: 181 SDTVNTYAFTKTTALDTKQAAYDSANGAY 209
Score = 93.3 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 45/358 (12%), Positives = 97/358 (27%)
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+ + S E ++ ++ T + A++
Sbjct: 12 LTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGLTVAARNANDGI 71
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ + I+ L L + + + +D + + D
Sbjct: 72 SLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRMEEINRVTKQTDF 131
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+G +S + + + I A A T+S T + + +
Sbjct: 132 NGIKVLDNRTKTDSSYDFQVGSKDNEQISIAIGASSGWNLATANADGTSSDTVNTYAFTK 191
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ + + G T + K D + D+
Sbjct: 192 TTALDTKQAAYDSANGAYLAAVKADATNGTTTAAALKNAADTATTDLATAVKDATAVNEA 251
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
++ T A + K ++ ID +K +G+ +R
Sbjct: 252 VNGKSRTVAAKGFDVLNGTVAADGKATGTSPLADIDKALKAVDTQRSVLGASQNRFESTI 311
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + R+ DAD ++E + +S Q QQ L+ N +LSL R
Sbjct: 312 TNLNNTVNNLTSARSRIQDADYSTEVSNMSRAQILQQAGTSVLAQANQVPQTVLSLLR 369
>gi|110227189|gb|ABG56543.1| FlaA [Aeromonas hydrophila]
Length = 302
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 70/179 (39%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + + +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNMMNSTKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D +++Q E+ QL +++
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSAKDREALQKEVDQLGAEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ ++F G L A + D + V + +
Sbjct: 125 RISTSTTFAGTKLLDGTFSGVFQVGADAQQTISFGLDQSMGFSVSGIAKAAGTAVDMGT 183
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/238 (12%), Positives = 72/238 (30%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ LA T+ + + + +A + +
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSAKDREALQKEVDQLGAEIN 124
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+T + + + + + + V + + D+
Sbjct: 125 RISTSTTFAGTKLLDGTFSGVFQVGADAQQTISFGLDQSMGFSVSGIAKAAGTAVDMGTV 184
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
I S + + + + A + + + + +++ D + ++G++ +R+
Sbjct: 185 IGSAFDVTAIFASGSAGGISISSQSNAQNVLAAADLMLAVVDGKRAELGAVQNRMDSTIR 244
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + V R+ DAD A E+ ++ QQ A LS N L L +G
Sbjct: 245 NQANISENVSAARSRIRDADFAIETANMTKQNILQQAASSILSQANQRPQSALQLLQG 302
>gi|5107847|gb|AAD28523.2|AF128952_1 flagellin [Escherichia coli]
Length = 565
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 46/360 (12%), Positives = 90/360 (25%), Gaps = 3/360 (0%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ L +R+SSGLR++ A D+AA +IA S+ L+ + G S
Sbjct: 1 NNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVA 60
Query: 75 DIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
+ +S+ + + I+ +D SIQ EI ++ ++ + FNG
Sbjct: 61 QTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGV 120
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
N L D A I ++ + + + +
Sbjct: 121 NVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGSGTIANKAATISDLTAAK 180
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
+ + S A + + +
Sbjct: 181 MDAATNTITTTNNALTASKALDQLKDGDTVTIKADAAQTATVYTYNASAGNFSFSNVSNN 240
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ ++ A + T + +
Sbjct: 241 TSEKAGDVAASLLPPAGQTAIGVYKAASGEVNFDVDANGKITIGGQKAYLTSDGNLTTND 300
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ + S+ T + T A + VSF DT
Sbjct: 301 AGGATAATLDGLFKKAGDGQSIGFKKTASVTMGGTTYNFKTGADADAATANAGVSFTDTA 360
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/358 (10%), Positives = 88/358 (24%), Gaps = 2/358 (0%)
Query: 82 SKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSS 141
+ + S + + D+A ++
Sbjct: 208 DTVTIKADAAQTATVYTYNASAGNFSFSNVSNNTSEKAGDVAASLLPPAGQTAIGVYKAA 267
Query: 142 TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
+ + V + G+ T D L ++ + I +
Sbjct: 268 SGEVNFDVDANGKITIGGQKAYLTSDGNLTTNDAGGATAATLDGLFKKAGDGQSIGFKKT 327
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
+ + Y+ A+ T A A T
Sbjct: 328 ASVTMGGTTYNFKTGADADAATANAGVSFTDTASKETVLNKVATAKQGKAAAADGDTSAT 387
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
+ SG ++ +A + + T T T Y +D
Sbjct: 388 ITYKSGVQTYQAVFAAGDGTASAKYADKADVSNATATYTDADGEMTTIGSYTTKYSIDAN 447
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM--EEMVSFIDTQIKCATAAA 379
+ + + + ++ + ++ + +D I
Sbjct: 448 NGKVTVDSGTGTGKYAPKVGAEVYVSANGTLTTDATSEGTVTKDPLKALDEAISSIDKFR 507
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G+I +R+ + + + R+ DAD A+E + +S Q QQ L+
Sbjct: 508 SSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLA 565
>gi|307823500|ref|ZP_07653729.1| flagellin domain protein [Methylobacter tundripaludum SV96]
gi|307735485|gb|EFO06333.1| flagellin domain protein [Methylobacter tundripaludum SV96]
Length = 284
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/227 (16%), Positives = 76/227 (33%), Gaps = 4/227 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A+ L + +L +R+S+GLRV+ A D+AA +I M S ++
Sbjct: 5 INTNLGALGVQGSLNKNSMSLSTSMERLSTGLRVNSAKDDAAGLAIGDRMNSQIRGMTVA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE----RGTDSKSIQSEITQLQSQL 119
G S A+ M D + +++ D + +Q E QL ++
Sbjct: 65 IRNANDGISMAQTAEFAMGTITDTLQRMRDLGVQAANMGAVGSGDRQKLQLEFKQLGLEI 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ I ++FN + L + + + + ++ S
Sbjct: 125 KRIVDNTTFNDKKILAGSMKGANFQVGAGTATNNQISITVSNLMSVGGVKAVASATPGVS 184
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ I + + + + ++ +T L +
Sbjct: 185 IGSTAGSAKIRSAIDSIDLAIKNVDNFRATLGAVQNRFTTTIANLQS 231
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 48/138 (34%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+T + + G + T + + + + ID IK
Sbjct: 147 NFQVGAGTATNNQISITVSNLMSVGGVKAVASATPGVSIGSTAGSAKIRSAIDSIDLAIK 206
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ +R ++ + R++DAD A+E+ LS Q QQ
Sbjct: 207 NVDNFRATLGAVQNRFTTTIANLQSSVENQSAAKSRIMDADFAAETASLSRSQILQQAGT 266
Query: 434 QALSIVNNSTARILSLFR 451
L+ N S +LSL R
Sbjct: 267 AMLAQANQSGQGVLSLLR 284
>gi|307293801|ref|ZP_07573645.1| flagellin domain protein [Sphingobium chlorophenolicum L-1]
gi|306879952|gb|EFN11169.1| flagellin domain protein [Sphingobium chlorophenolicum L-1]
Length = 277
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN SA+ A N L +R+S+G R++ A D+AA +IA M S +
Sbjct: 1 MTVIGTNSSALRAQNASAMANKALGTAMERLSTGKRINSAKDDAAGLAIASTMTSQIRGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQS 117
+ G S A+ + + +++ ++ G +I++EI QL
Sbjct: 61 TQGIRNANDGISLAQTAEGALGEVSNMLQRMRELTVQGLNGTNDTKSQGNIKNEIDQLAK 120
Query: 118 QLRDIARGSSFNGENWLRTDL 138
Q+ + + FNG++
Sbjct: 121 QIDSVLSKTQFNGKSLFSATA 141
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/264 (10%), Positives = 70/264 (26%)
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+ + + +++ + +T + + GI+
Sbjct: 13 AQNASAMANKALGTAMERLSTGKRINSAKDDAAGLAIASTMTSQIRGMTQGIRNANDGIS 72
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
A N + + GN + K + +
Sbjct: 73 LAQTAEGALGEVSNMLQRMRELTVQGLNGTNDTKSQGNIKNEIDQLAKQIDSVLSKTQFN 132
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ T + + + T A + + ++
Sbjct: 133 GKSLFSATAPATISVQAGAGGTDTVAITLGQLDLSTVATATGGALSGTVAAPAFVAADLA 192
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
DT ++ +G+ +R+ + + + R+ DAD ++E+T L+ Q
Sbjct: 193 VYDTALETVATKRADLGAAQNRLESTVNNLTANVTNLTDARSRIEDADFSAETTALAKQQ 252
Query: 427 TQQQLAVQALSIVNNSTARILSLF 450
Q + L+ N S +L L
Sbjct: 253 ILSQASTAMLAQANQSQQGVLKLI 276
>gi|167751134|ref|ZP_02423261.1| hypothetical protein EUBSIR_02119 [Eubacterium siraeum DSM 15702]
gi|167655849|gb|EDR99978.1| hypothetical protein EUBSIR_02119 [Eubacterium siraeum DSM 15702]
Length = 542
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 27/260 (10%), Positives = 67/260 (25%)
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
N ++ + +++K T + AT A + +
Sbjct: 283 TNGAHGSSDKITFTANTYGKAVDTNMASKITISTTVAAGKENVKVATAATTTKGAELTLE 342
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
L ++ + N +
Sbjct: 343 LSTGKTYTEKDIENILKEAGYDYSVKLEDTKNTDGDADGKIYFNVKNTAEVAITDGAGVG 402
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ T + + + + + + A + +DT
Sbjct: 403 KASVPNNGKGLTFQIGANGVEDQRVTLNVNDMSSSAIGVANADVSTQDAANAAIDMVDTA 462
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+K + +G++ +R+ + + + + ++ D DMA+E + QQ
Sbjct: 463 VKTVSMQRAGLGALQNRLEYTVNNLTTTNENLTAAESQIRDTDMATEMINYTKNNILQQA 522
Query: 432 AVQALSIVNNSTARILSLFR 451
+ L+ N IL L +
Sbjct: 523 SQAMLAQANQQPQAILQLLQ 542
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 89/235 (37%), Gaps = 4/235 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N +A++A+ K+ + +++SSG +++ A DNAA +I++ M+S LS
Sbjct: 5 VVQHNLNAINANNKMNINVSGTKKATEKLSSGYQINRAGDNAAGLAISEKMRSQIRGLSQ 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD----SKSIQSEITQLQSQ 118
+ G S + A+ G+++ ++ ++ ++IQ E+ L+S+
Sbjct: 65 ATKNANDGISLIQTAEGGLNETHSILQRMRELAVQSANGTYQDDTDREAIQLEVDALKSE 124
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + +NG L LG S + + + ++ T+ + T+
Sbjct: 125 IDRIASSTEYNGMKLLDGSLGGSQGTTEYGAKYGSVSIADTDLKGATVTSNIAGVTITTA 184
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233
+ G + + ++ + D I+
Sbjct: 185 YTASGKGGENAIWSADGKNLTMNLVSGATYTQKDIDNLIANATQSKDAGQEQAPA 239
>gi|15894833|ref|NP_348182.1| flagellin [Clostridium acetobutylicum ATCC 824]
gi|15024506|gb|AAK79522.1|AE007665_9 Flagellin [Clostridium acetobutylicum ATCC 824]
Length = 278
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 69/174 (39%), Gaps = 3/174 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A ++SSGLR++ A D+ A I++ MK+ L+A
Sbjct: 3 IAHNLNAAKILYYSNINEKYFNEASLKLSSGLRINSAKDDPAGLGISERMKAQIRGLNAS 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ G S + A+ G+++A +++ + D SI+ E+ QL+ +++
Sbjct: 63 KRNLEDGFSMLQTAEGGLNEAENILQRMNELAVQAANGTNCSLDRNSIKDELKQLEDEVK 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
I+ +FNG + L + S F+ D I + T
Sbjct: 123 HISVSINFNGIDLLSASSHVTIQGGPNSSPCDFLNIDMSYFNIGRSLADIINGT 176
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 43/135 (31%)
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
L ++ +L + + + +S I I +
Sbjct: 142 VTIQGGPNSSPCDFLNIDMSYFNIGRSLADIINGTKINVDTPQNAKSSISVIQQAINSVS 201
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
+ +IGS +RI + + ++ + R+ D DMA E+ + + +
Sbjct: 202 RSRAEIGSYENRIDFRINNLENEECNLTSSYSRITDVDMAEETMEYFKYSILSKASDILM 261
Query: 437 SIVNNSTARILSLFR 451
+ ++L L +
Sbjct: 262 AQALQEPKQVLKLLQ 276
>gi|114054834|gb|ABI50017.1| FlaA [Clostridium botulinum]
Length = 270
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+ S
Sbjct: 1 HNLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQASR 60
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDI 122
S + A+ +++ ++ ++ D +++Q E+ +LQS++ I
Sbjct: 61 NSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEINRI 120
Query: 123 ARGSSFNGENWLRTDLGSSTASIA 146
A + FN ++ + + ++
Sbjct: 121 ASQTQFNTKSLINGAVSEDAKAMT 144
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 48/132 (36%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D ++ T + + I + + N + + + ++ ID+ I +
Sbjct: 139 DAKAMTFQIGANSGQTIKLTIGSMDAKTLKVDNIKLDDTAANITKQIATIDSAINSVSKE 198
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 199 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 258
Query: 439 VNNSTARILSLF 450
N + +L L
Sbjct: 259 ANQAPQGVLQLL 270
>gi|152965592|ref|YP_001361376.1| flagellin domain protein [Kineococcus radiotolerans SRS30216]
gi|151360109|gb|ABS03112.1| flagellin domain protein [Kineococcus radiotolerans SRS30216]
Length = 529
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 53/138 (38%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + ++ VT + T + + ++ E ++ I +
Sbjct: 392 TSSATVQKGNTGVFQVGANAGETITMGVTGVSSAALGTSSIDLRVNASEAITKISKALDS 451
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
++ IG+I +R + + + + + + D DMA E T+ + Q Q
Sbjct: 452 ISSQRASIGAIQNRFEHAVNNLNVSIENITASESAIRDTDMAKEMTKFTKNQILSQAGTS 511
Query: 435 ALSIVNNSTARILSLFRG 452
L+ N+++ ILSL RG
Sbjct: 512 MLAQANSASQNILSLLRG 529
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 66/148 (44%), Gaps = 4/148 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A+++ + L + + +++SSG R++ AAD+AA +++ ++S ++
Sbjct: 5 INNNIAAVNSYRNLAASDKAMSGSLEKLSSGFRINKAADDAAGLVVSEGLRSQINGMTQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD----SKSIQSEITQLQSQL 119
+ G + A + + ++ +++ T G+ + Q E+TQL ++L
Sbjct: 65 ARNAQDGVNVAQTADGALGVSTSILQRMRDLATQAANAGSQDVLAKDAAQKELTQLNAEL 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAK 147
I+ +SF L G +
Sbjct: 125 DRISTTTSFGNTKLLDGTYGVTAKVDGD 152
>gi|152206738|gb|ABD33792.2| flagellin [Bacillus thuringiensis serovar novosibirsk]
Length = 378
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 42/256 (16%), Positives = 92/256 (35%), Gaps = 3/256 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 7 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARENGLGVA 66
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + ++ +++ +++ G + K++ E + L+ Q+
Sbjct: 67 ANNTQDGMSLIRTADSALNSVSNILLRMRDIANQSANGTNTGDNQKALDKEFSALKEQID 126
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L D S + S + + T+ +
Sbjct: 127 YISKNTEFNDKKLLNGDNKSIAIQTLDNADTSKQINIDLANTSTSSLKIDKLSIEGKGNQ 186
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + + + K ++ A ++T + K +
Sbjct: 187 TIAITAADIAKDTNIAALTSAQGKLAALTGTPAPAALTTAVDEFKAAFEKVDKNLMSDTQ 246
Query: 241 QAKGIATIPVPLPAAP 256
I A
Sbjct: 247 ITGIENAIKAYDGATT 262
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 47/137 (34%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ + + + + + V T D E + ID +
Sbjct: 242 MSDTQITGIENAIKAYDGATTKTLALAQAVGTAYTAPTPGDITKELPNASSSIKSIDAAL 301
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ + +G+ +R+ + +K ++ ++ DADMA E + ++ + +
Sbjct: 302 ETIASNRATLGATLNRLDFNVNNLKSQASSMASAASQIEDADMAKEMSEMTKFKILNEAG 361
Query: 433 VQALSIVNNSTARILSL 449
+ LS N + + L
Sbjct: 362 ISMLSQANQTPQMVSKL 378
>gi|57168248|ref|ZP_00367387.1| flagellin Cj1338c [Campylobacter coli RM2228]
gi|57020622|gb|EAL57291.1| flagellin Cj1338c [Campylobacter coli RM2228]
Length = 576
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 92/279 (32%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ + + ++
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGTGLGALAEEINKSADQTGVRATFTVETRGMAAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + G + S S
Sbjct: 245 RAGTTSDTFAINGVKIGQVAYEDGDANGALVSAINSVKD 283
Score = 95.6 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T IGS+ +++ + + I + + V+ + D D
Sbjct: 480 VTTLKGAMAVMDIAETATTNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVD 539
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A+S N +L L +
Sbjct: 540 FAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 576
>gi|327395259|dbj|BAK12681.1| flagellin FliC [Pantoea ananatis AJ13355]
Length = 311
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 75/204 (36%), Gaps = 5/204 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I TN ++ L + +R+SSGLR++ A D+AA +IA + S +
Sbjct: 1 MSVINTNILSLIVQNDLFLSQNAMSTAIERLSSGLRINSAKDDAAGMAIANRLTSRINGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQS 117
+ + G G S A+ + + + + I++ D SIQ+E+ Q
Sbjct: 61 TVATRNAGEGISLSQTAEGALDEINNNLQRIRDLTVQAQNGSNSAADIDSIQTEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLG--SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
++ I + FNG L T G + + D + + + T+
Sbjct: 121 EINRITAQTDFNGIKVLNTGSGASEYRFQVGAEDGETISIDIDSSDRYNLLKAGTTGTTL 180
Query: 176 LLDSSTDGTERYGLLDRNHKIKVE 199
+ T G G +
Sbjct: 181 NVRQMTSGDTVNGAARTVAAEGFD 204
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/257 (12%), Positives = 70/257 (27%)
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
++ + + + + + ++ A +
Sbjct: 54 TSRINGMTVATRNAGEGISLSQTAEGALDEINNNLQRIRDLTVQAQNGSNSAADIDSIQT 113
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
+++ G S+ + ++ T +S +
Sbjct: 114 EVNQRMEEINRITAQTDFNGIKVLNTGSGASEYRFQVGAEDGETISIDIDSSDRYNLLKA 173
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
T + + D + ++ + A T N ++ ID I+
Sbjct: 174 GTTGTTLNVRQMTSGDTVNGAARTVAAEGFDVLKGAVTGGANGTATGNSPLTDIDRAIQF 233
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G+ +R + M + R+ D D A+E + LS Q QQ V
Sbjct: 234 VDTQRSMMGADQNRFQSAIANLGSMVTNLTAARSRIEDVDYATEVSALSQAQILQQAGVA 293
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +L L R
Sbjct: 294 MLAQANQMPQLMLQLLR 310
>gi|284810826|gb|ADB96207.1| FliC2 [Yersinia enterocolitica]
gi|284810846|gb|ADB96222.1| FliC2 [Yersinia enterocolitica]
gi|284810854|gb|ADB96228.1| FliC2 [Yersinia enterocolitica]
gi|284810858|gb|ADB96231.1| FliC2 [Yersinia enterocolitica]
gi|284810862|gb|ADB96234.1| FliC2 [Yersinia enterocolitica]
Length = 374
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 71/209 (33%), Gaps = 3/209 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + + +
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTATDSSYDFQVGSKDNEQISIAIGKSSGWNLAAAKTDGTS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ + +
Sbjct: 181 SDTVNTYKFTTTDAIKTAQTDVTAKNTAY 209
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 61/206 (29%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
+ ++ + + A + + +A + T
Sbjct: 169 WNLAAAKTDGTSSDTVNTYKFTTTDAIKTAQTDVTAKNTAYLAAKAISDADPADATKATA 228
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+T AK ++ + + ++ A + A +
Sbjct: 229 TTTAKSALDTSNGTLATSVKTATTAGEAVNGNARTVAAEGFDVLKGQVAADGTAAGTTPL 288
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ ID +K +G+ +R + + + R+ DAD ++E + +S
Sbjct: 289 ADIDKALKAVDTQRSVLGASQNRFESTITNLNNTVNNLTSARSRIQDADYSTEVSNMSRA 348
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ L+ N +LSL R
Sbjct: 349 QILQQAGTSVLAQANQVPQTVLSLLR 374
>gi|170791517|gb|ACB38400.1| flagellin A [Aeromonas allosaccharophila]
Length = 289
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 3/204 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + + +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNMMNSTKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D +++Q E+ QL +++
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSAKDREALQKEVDQLGAEVN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ ++F G L G + A + + + S
Sbjct: 125 RISNATTFAGTKLLDGSFGGTFQVGADANQTIGFSLSQAGGFSISGIAAAAGKATTFISG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLK 204
+ N + +
Sbjct: 185 STAGGISISSQSNAQDVLAAVDSM 208
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 47/115 (40%)
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
T A + + + +++++ +D+ ++ ++G++ +R+
Sbjct: 175 AGKATTFISGSTAGGISISSQSNAQDVLAAVDSMLEVVDGKRAELGAVQNRMDSTIRNQA 234
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + V R+ DAD A E+ ++ QQ A LS N LSL +G
Sbjct: 235 NISENVSAARSRIRDADFAIETANMTKQNILQQAASSILSQANQRPQSALSLLQG 289
>gi|154687651|ref|YP_001422812.1| Hag [Bacillus amyloliquefaciens FZB42]
gi|154353502|gb|ABS75581.1| Hag [Bacillus amyloliquefaciens FZB42]
Length = 276
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 38/257 (14%), Positives = 93/257 (36%), Gaps = 3/257 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ S++L + + +++SSGLR++ A D+AA +I++ M+S L
Sbjct: 3 INHNIAALNTSRQLNAGSNSAAKNMEKLSSGLRINRAGDDAAGLAISEKMRSQIRGLDMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ + T +D +Q E+ QL S++
Sbjct: 63 SKNAQDGISLIQTAEGALNETHSILQRMSELATQAANDTNTTSDRAELQKEMDQLSSEVT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L T I + + N + + S+
Sbjct: 123 RISTDTEFNTKKLLDGTATDLTFQIGANEGQTMKLSINKMDSESLAVGTATAGIDISTSA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + + T++ + ++ + +
Sbjct: 183 DAASTALTTIKTAIDTVSSERAKLGAVQNRLEHTINNLGTSSENLTSAESRIRDVDMASE 242
Query: 241 QAKGIATIPVPLPAAPA 257
+ + +
Sbjct: 243 MMEYTKNNILTQASQAM 259
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 37/94 (39%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
T A D A ++ I T I ++ K+G++ +R+ + + + +
Sbjct: 171 TATAGIDISTSADAASTALTTIKTAIDTVSSERAKLGAVQNRLEHTINNLGTSSENLTSA 230
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
R+ D DMASE + Q + L+ N
Sbjct: 231 ESRIRDVDMASEMMEYTKNNILTQASQAMLAQAN 264
>gi|117923400|ref|YP_864017.1| flagellin domain-containing protein [Magnetococcus sp. MC-1]
gi|117607156|gb|ABK42611.1| flagellin domain protein [Magnetococcus sp. MC-1]
Length = 272
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 70/181 (38%), Gaps = 3/181 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L + L R++SGLR++ A D+AA +I Q M + L+
Sbjct: 5 INTNVASLNAQRNLSNSTGKLGTTFSRLASGLRINSARDDAAGLAITQRMTAQIRGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S +A+ + + + + I+ +D ++ E+ Q+ ++++
Sbjct: 65 IRNANDGISVSQVAEGALDETTNALQRIRELAVQSANAIYNSSDRLNLDKEVDQMLAEVQ 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN N L + + G + T ++
Sbjct: 125 RISVDTEFNKLNVLDGTYTGQAIQVGAFASQTITISIAGAQLSHLGITNVTISTAAGATA 184
Query: 181 T 181
Sbjct: 185 A 185
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 33/86 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +S ID + +G+I SR + + + + R+ DAD
Sbjct: 176 ISTAAGATAALSLIDLALDSIADVRANLGAIQSRFGAVTANLSNIVENMSASRSRIQDAD 235
Query: 415 MASESTRLSALQTQQQLAVQALSIVN 440
+A+E+ L+ QQ L+ N
Sbjct: 236 IAAETATLTKNAILQQAGTAVLAQAN 261
>gi|269965414|ref|ZP_06179533.1| polar flagellin FlaE [Vibrio alginolyticus 40B]
gi|269829893|gb|EEZ84123.1| polar flagellin FlaE [Vibrio alginolyticus 40B]
Length = 374
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 70/183 (38%), Gaps = 3/183 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ +N SAM A + L Q ++SG R++ A+D+AA I+ + L
Sbjct: 1 MISLNSNVSAMVAQRHLSQAAAQNVESQRNLTSGFRINSASDDAAGLQISNTLHVQTRGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
S A+ + ++ D++ +++ D +SIQ E+ LQ
Sbjct: 61 DVALRNAHDAFSVAQTAEGALHESSDILQRLRSLGLQAANGSYDSSDRQSIQYEVVALQD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L +A ++F +N GS + I + + N + I + +
Sbjct: 121 ELDRVAITTTFADKNLFDGSYGSQSFHIGANANSISLTLRNMRSHIPEMGGQHYVGDAVD 180
Query: 178 DSS 180
Sbjct: 181 KDW 183
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/371 (10%), Positives = 89/371 (23%)
Query: 80 GMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
++ + M ++ A + +++ S + S R
Sbjct: 3 SLNSNVSAMVAQRHLSQAAAQNVESQRNLTSGFRINSASDDAAGLQISNTLHVQTRGLDV 62
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + + + S + +
Sbjct: 63 ALRNAHDAFSVAQTAEGALHESSDILQRLRSLGLQAANGSYDSSDRQSIQYEVVALQDEL 122
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+V + + + + + + A
Sbjct: 123 DRVAITTTFADKNLFDGSYGSQSFHIGANANSISLTLRNMRSHIPEMGGQHYVGDAVDKD 182
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + S + + + + T + A V +
Sbjct: 183 WRVTKDNQTLKVEYQDSKGQTHTESIGLKLGDRIEQVATYINAQQSIVNASVTENNELQF 242
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
ST L + V+ + + + V ID IK +
Sbjct: 243 FASTMNAPEGVLLDGSLADELDVSAGQLVTMDDIDMSTAGKAQLSVGVIDAAIKYVDSHR 302
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+IGS +R++ D + + +V + R+ D D A EST + Q Q L+
Sbjct: 303 SEIGSFQNRVNGSMDNLNTVNRSVTESKSRIRDTDFARESTEMVRSQVLQDATTALLAQA 362
Query: 440 NNSTARILSLF 450
+ L L
Sbjct: 363 KQRPSSALGLL 373
>gi|218230951|ref|YP_002366445.1| flagellin [Bacillus cereus B4264]
gi|218158908|gb|ACK58900.1| flagellin protein [Bacillus cereus B4264]
Length = 367
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + ++ +++ +++ + ++Q E +L+ Q++
Sbjct: 63 ANNTQDGMSLIRTADSALNSVSNILLRMRDLANQSANGTNTAENKAAMQKEFGELKDQIK 122
Query: 121 DIARGSSFNGENWLRTDLG 139
I+ + FN ++ L G
Sbjct: 123 YISENTQFNDQHLLNAAKG 141
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 38/88 (43%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ ID +K +G+ +R+ + +K ++ ++ DADMA E + ++
Sbjct: 280 AITKIDAALKTVADNRATLGATLNRLDFNVNNLKSQSASMASAASQIEDADMAKEMSEMT 339
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + LS N + + L +
Sbjct: 340 KFKILNEAGISMLSQANQTPQMVSKLLQ 367
>gi|315637879|ref|ZP_07893068.1| flagellin subunit protein FlaB [Campylobacter upsaliensis JV21]
gi|315482034|gb|EFU72649.1| flagellin subunit protein FlaB [Campylobacter upsaliensis JV21]
Length = 298
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 42/190 (22%), Positives = 73/190 (38%), Gaps = 3/190 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNAGQLDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I + + ++ SS
Sbjct: 125 NIANTTSFNGKQLLSGGFINQEFQIGSQSNQTIKATIGPTQSSKIGLTRFETGQQIIKSS 184
Query: 181 TDGTERYGLL 190
Sbjct: 185 EVEMVIKNYN 194
>gi|116489824|gb|ABJ98819.1| phase I flagellin middle domain variant C150 [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 318
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 3/148 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAK 147
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGAN 151
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 48/143 (33%)
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ T + D+ L + + + D + E + I
Sbjct: 176 QQKYKVSDTAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTTENPLQKI 235
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + +G++ +R + + + + R+ D+D A+E + +S Q
Sbjct: 236 DAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQIL 295
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 296 QQAGTSVLAQANQVPQNVLSLLR 318
>gi|91225883|ref|ZP_01260852.1| polar flagellin FlaE [Vibrio alginolyticus 12G01]
gi|91189533|gb|EAS75809.1| polar flagellin FlaE [Vibrio alginolyticus 12G01]
Length = 374
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 70/183 (38%), Gaps = 3/183 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ +N SAM A + L Q ++SG R++ A+D+AA I+ + L
Sbjct: 1 MISLNSNVSAMVAQRHLSQAAAQNVESQRNLTSGFRINSASDDAAGLQISNTLHVQTRGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
S A+ + ++ D++ +++ D +SIQ E+ LQ
Sbjct: 61 DVALRNAHDAFSVAQTAEGALHESSDILQRLRSLGLQAANGSYDSSDRQSIQYEVVALQD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L +A ++F +N GS + I + + N + I + +
Sbjct: 121 ELDRVAITTTFADKNLFDGSYGSQSFHIGANANSISLTLRNMRSHIPEMGGQHYVGDAVD 180
Query: 178 DSS 180
Sbjct: 181 KDW 183
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 37/371 (9%), Positives = 90/371 (24%)
Query: 80 GMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
++ + M ++ A + +++ S + S R
Sbjct: 3 SLNSNVSAMVAQRHLSQAAAQNVESQRNLTSGFRINSASDDAAGLQISNTLHVQTRGLDV 62
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + + + S + +
Sbjct: 63 ALRNAHDAFSVAQTAEGALHESSDILQRLRSLGLQAANGSYDSSDRQSIQYEVVALQDEL 122
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+V + + + + + + A
Sbjct: 123 DRVAITTTFADKNLFDGSYGSQSFHIGANANSISLTLRNMRSHIPEMGGQHYVGDAVDKD 182
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + S + + + + + T + A V +
Sbjct: 183 WRVTKDNQTLKVEYQDSKGQTQTESIGLKLGDRIEQVATYINAQQSIVNASVTENNELQF 242
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
ST + + V+ + + + + ID IK +
Sbjct: 243 FASTMKAPEGVVLDGSLADELDVSAGQLVTMDDIDMSTAGKAQLSIGVIDAAIKYVDSHR 302
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+IGS +R++ D + + +V + R+ D D A EST + Q Q L+
Sbjct: 303 SEIGSFQNRVNGSMDNLNTVNRSVTESKSRIRDTDFARESTEMVRSQVLQDATTALLAQA 362
Query: 440 NNSTARILSLF 450
+ L L
Sbjct: 363 KQRPSSALGLL 373
>gi|170791543|gb|ACB38413.1| flagellin A [Aeromonas popoffii]
gi|170791579|gb|ACB38431.1| flagellin A [Aeromonas popoffii]
Length = 306
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 78/221 (35%), Gaps = 3/221 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + + +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNMTNSTKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D +++Q E+ QL +++
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSAKDREALQKEVDQLGAEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ ++F G L G + A + + T+ + S
Sbjct: 125 RISTSTTFAGTKLLDGSFGGTFQVGADANQTISFSLSQAAGFSISGIAKAAGTTIAVISG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKK 221
G+ + + S +
Sbjct: 185 AAGSVTTNVGVSIIFGGGGVGGIDISSQSEAQKVLAAADAM 225
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 49/138 (35%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
TT+ + + + + + + +++++ D ++
Sbjct: 169 SGIAKAAGTTIAVISGAAGSVTTNVGVSIIFGGGGVGGIDISSQSEAQKVLAAADAMLEV 228
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
++G++ +R+ + + V R+ DAD A+E+ ++ QQ A
Sbjct: 229 VDGKRAELGAVQNRLDSTIRNQANISENVSAARSRIRDADFATETANMTKQNILQQAASS 288
Query: 435 ALSIVNNSTARILSLFRG 452
LS N L L +G
Sbjct: 289 VLSQANQRPQAALQLLQG 306
>gi|329928699|ref|ZP_08282548.1| flagellin protein [Paenibacillus sp. HGF5]
gi|328937480|gb|EGG33898.1| flagellin protein [Paenibacillus sp. HGF5]
Length = 274
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/255 (16%), Positives = 87/255 (34%), Gaps = 3/255 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N ++ + ++L N +++SSG R++ AAD+AA +I++ M++ L
Sbjct: 3 INHNIASYNTQRQLATNNTQQSKSLEKLSSGYRINRAADDAAGLAISEKMRNQIRGLEQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ + T DS I +EITQL +Q+
Sbjct: 63 SKNALDGISMIQTAEGALNETHAMLQRMGELYTQAANETLTSADSAKIDTEITQLSAQID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L D + + + +T + ++
Sbjct: 123 SISEQTQFNTKKLLNGDTTDVVFQVGANADETITVTFEAADALTLKVDATSLTALDGTNA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + + + + L + + + T L A
Sbjct: 183 TAKANMTKVTEAINTVSELRSNLGAVQNRLEHTINNLGTTSENLQAAESRIRDVDMAKEM 242
Query: 241 QAKGIATIPVPLPAA 255
I A
Sbjct: 243 SEFTKTGILQQAATA 257
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/271 (11%), Positives = 69/271 (25%)
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
Y + + + S Y + +
Sbjct: 4 NHNIASYNTQRQLATNNTQQSKSLEKLSSGYRINRAADDAAGLAISEKMRNQIRGLEQAS 63
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + + AA+ T ++ I T ++
Sbjct: 64 KNALDGISMIQTAEGALNETHAMLQRMGELYTQAANETLTSADSAKIDTEITQLSAQIDS 123
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
K D + + +TL + + T
Sbjct: 124 ISEQTQFNTKKLLNGDTTDVVFQVGANADETITVTFEAADALTLKVDATSLTALDGTNAT 183
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ++ + I + +G++ +R+ + + + ++ R+ D DMA E +
Sbjct: 184 AKANMTKVTEAINTVSELRSNLGAVQNRLEHTINNLGTTSENLQAAESRIRDVDMAKEMS 243
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ QQ A L+ N +L L R
Sbjct: 244 EFTKTGILQQAATAMLAQANQQPQGVLQLLR 274
>gi|144202|gb|AAA23027.1| flagellin [Campylobacter coli]
Length = 573
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/279 (18%), Positives = 95/279 (34%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGGFTNQEFQIGSSSNQTIKASIGATQSSKIGVTRFETGSQSFSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T G + + + + I+ K + +K+ A
Sbjct: 185 TVGLTIKNYNGIEDFKFDSVVISTSVGTGLGALAEEINRNADKTGIRATFDVKSVGAYAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + N G + + S +
Sbjct: 245 KAGNTSQDFAINGVVIGQINYNDGDNNGQLISAINAVKD 283
Score = 96.3 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 64/206 (31%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
I A G + + + + + G+ + S + +
Sbjct: 368 GQISAANADAMGFNAYNGGGAKQIIFASSIAGFMSQAGSGFSAGSGFSVGSGKNYSAILS 427
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+++ V + T + S ++ ++ H T ++
Sbjct: 428 ASIQIVSSARSISSTYVVSTGSGFSAGSGNSQFAALRISTVSAHDETAGVTTLKGAMAVM 487
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+T I IG++ +++ + + I + + V+ + D D A+ES S
Sbjct: 488 DIAETAITNLDQIRADIGAVQNQLQVTINNITVTQVNVKAAESTIRDVDFAAESANFSKY 547
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q A+S N +L L +
Sbjct: 548 NILAQSGSYAMSQRNAVQQNVLKLLQ 573
>gi|53794216|gb|AAU93692.1| FlaB2 [Brachyspira pilosicoli P43]
Length = 286
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 77/186 (41%), Gaps = 3/186 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N SA++A + L+ N +L ++SG+R++ A D+A+ ++++ M++ L
Sbjct: 2 VINNNISAVNAQRTLKFRNVDLSKDMASLASGMRINRAGDDASGLAVSEKMRTQIRGLRQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
G S + + + ++ D++ I+ D IQ E++QL ++
Sbjct: 62 AERNTQDGISFIQTTEGYLQESQDILQRIRELAVQSANGIYTDDDRMLIQVEVSQLVDEV 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FN N L A A + F N + + + L +
Sbjct: 122 NRIASQAQFNTLNMLTGRFADPNAGGAPAASMWFHMGANMDERRRVYIGTMTAAALGLQN 181
Query: 180 STDGTE 185
+ DGT
Sbjct: 182 TADGTT 187
Score = 86.7 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 40/115 (34%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + L T T + + + +D + + +G+ +R+ L +
Sbjct: 172 MTAAALGLQNTADGTTLSISSIDKANSAIGLVDEALMKVSKQRSNLGAYQNRLELTAQGL 231
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R+ D DMA S + + Q Q + L+ N T L +
Sbjct: 232 MIGYENTMASESRIRDTDMAEASVKFAKDQILSQTNLAMLAQANTMTQGAXRLLQ 286
>gi|9296983|sp|Q46114|FLB2_CAMJE RecName: Full=Flagellin B
gi|441236|emb|CAA82524.1| flagellin B [Campylobacter jejuni]
Length = 575
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 77/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + +
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGSRISVGG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + +
Sbjct: 185 EVQFTLKNYNGIDDFKFQKVVISTSVGT 212
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + + I + + V+ + D D
Sbjct: 479 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVD 538
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A+S N +L L +
Sbjct: 539 FAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 575
>gi|15639779|ref|NP_219229.1| flagellar filament 33 kDa core protein (flaB2) [Treponema pallidum
subsp. pallidum str. Nichols]
gi|189026017|ref|YP_001933789.1| flagellar filament 33 kDa core protein [Treponema pallidum subsp.
pallidum SS14]
gi|6015159|sp|P21991|FLAB2_TREPA RecName: Full=Flagellar filament 33 kDa core protein; AltName:
Full=Class B
gi|3323099|gb|AAC65757.1| flagellar filament 33 kDa core protein (flaB2) [Treponema pallidum
subsp. pallidum str. Nichols]
gi|189018592|gb|ACD71210.1| flagellar filament 33 kDa core protein [Treponema pallidum subsp.
pallidum SS14]
gi|291060151|gb|ADD72886.1| flagellin [Treponema pallidum subsp. pallidum str. Chicago]
Length = 286
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 81/200 (40%), Gaps = 3/200 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM + + L N +++ +++SSGLR++ + D+A+ ++++ M+S L+
Sbjct: 3 INHNMSAMFSQRTLGHTNLSVQKNIEKLSSGLRINRSGDDASGLAVSEKMRSQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S G S + +A+A + + DV+ I+ D IQ E++QL +++
Sbjct: 63 STNAQNGISFIQVAEAFLQETTDVIQRIRELSVQAANGIYSAEDRLYIQVEVSQLVAEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG N L + F N + + + + +
Sbjct: 123 RIASHAQFNGMNMLTGRFARQGGENTVTASMWFHIGANMDQRTRAYIGTMTAVAMGIRDA 182
Query: 181 TDGTERYGLLDRNHKIKVEP 200
D + +
Sbjct: 183 GDESVMNIDSPEKANRAIGT 202
Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 40/115 (34%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + + + + +D IK +G+ +R+ I
Sbjct: 172 MTAVAMGIRDAGDESVMNIDSPEKANRAIGTLDQAIKRINKQRADLGAYQNRLDHTVAGI 231
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + ++ R+ D DMA E + Q Q L+ N +T +LSL R
Sbjct: 232 NVAAENLQAAESRIRDVDMAKEMVDYTKNQILVQSGTAMLAQANQATQSVLSLLR 286
>gi|126654105|ref|ZP_01725927.1| Flagellin and related hook-associated proteins [Bacillus sp.
B14905]
gi|126589413|gb|EAZ83562.1| Flagellin and related hook-associated proteins [Bacillus sp.
B14905]
Length = 276
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
MS + + R+S+G R++ AAD+ A +I++ M++ L+ + I G
Sbjct: 10 MSILNNMNRHYGAMSKAMLRISTGYRINSAADDPAGLAISEKMRAQIRGLNMGAKNIQDG 69
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSS 127
S V A+ +++ ++ ++ D K + E +L+ +++ I+ +
Sbjct: 70 ISLVQTAEGALNETHAMIQRMRELAVEAANDTLTDEDRKQLDLEFQELKKEIQRISTDTE 129
Query: 128 FNGENWLRTDL 138
FN + L D
Sbjct: 130 FNTKTLLNGDY 140
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 39/96 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ +S ++ +K + ++G+ +R+ + + ++ R+ DAD
Sbjct: 176 IATRDEADKAISSMEDALKRVSNERSRLGAYQNRLEHAYNANVNTAENLQAAESRIRDAD 235
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+A E + Q Q + L++ +L L
Sbjct: 236 IAKEMMNMVKAQILMQASQYVLAMHMQQAQSVLKLL 271
>gi|117619531|ref|YP_856234.1| flagellin [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117560938|gb|ABK37886.1| flagellin [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|170791535|gb|ACB38409.1| flagellin A [Aeromonas hydrophila subsp. hydrophila]
Length = 302
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 38/212 (17%), Positives = 78/212 (36%), Gaps = 4/212 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + N +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNLMNTNKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E TQL +++
Sbjct: 65 NRNANDGISVAQTAEGAMDEITSMLQRMRTLSQQSANGSNNTDDRTALQQEYTQLITEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A+ ++F G N L + T + + ++ I + +
Sbjct: 125 RVAKDTTFGGTNILNGNY-FGTFQVGADAGQTITFKLTSAFTLSGIASASKGSATVQSVA 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYD 212
T + + +
Sbjct: 184 TADKYKVTKSATATTTTSVGSITTASAAQLAM 215
Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats.
Identities = 32/238 (13%), Positives = 67/238 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ +A T+ + + + + ++ +
Sbjct: 65 NRNANDGISVAQTAEGAMDEITSMLQRMRTLSQQSANGSNNTDDRTALQQEYTQLITEID 124
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
A G ++I T ++ +
Sbjct: 125 RVAKDTTFGGTNILNGNYFGTFQVGADAGQTITFKLTSAFTLSGIASASKGSATVQSVAT 184
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
D + T + + A + ++ +D IK + ++G++ +R
Sbjct: 185 ADKYKVTKSATATTTTSVGSITTASAAQLAMANLDFMIKVVDSKRAELGAVQNRFDSTIR 244
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + V R+ DAD A+E+ L+ QQ A LS N LSL +G
Sbjct: 245 NQANVSENVSAARSRIRDADFATETANLTKQNILQQAASTILSQANQRPQSALSLLQG 302
>gi|144199|gb|AAA23025.1| flagellin B [Campylobacter jejuni]
Length = 576
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 92/279 (32%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNSNELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFTNQEFQIGASSNQTIKATIGATQSSKIGVTRFETGAQSFTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + + + I+ K + +K
Sbjct: 185 VVGLTIKNYNGIEDFKFDNVVISTSVGTGLGALAEEINKSADKTGVRATYDVKTTGVYAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ + N G + + S +
Sbjct: 245 KEGTTSQDFAINGVVIGQINYKDGDNNGQLVSAINAVKD 283
Score = 95.6 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/328 (10%), Positives = 79/328 (24%)
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F + + ++ + + + D D
Sbjct: 249 TSQDFAINGVVIGQINYKDGDNNGQLVSAINAVKDTTGVQASKDENGKLVLTSADGRGIK 308
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + V IS + + ++ +
Sbjct: 309 ITGDIGVGSGILANQKENYGRLSLVKNDGRDINISGTNLSAIGMGTTDMISQSSVSLRES 368
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A G + SA G+ + S +
Sbjct: 369 KGQISATNADAMGFNSYKGGGKFVFTQNVSSISAFMSAQGSGFSRGSGFSVGSGKNLSVG 428
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + +T + S ++ T T
Sbjct: 429 LSQGIQIISSAASMSNTYVVSAGSGFSSGSGNSQFAALKTTAANTTDETAGVTTLKGAMA 488
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ +T I IGS+ +++ + + I + + V+ + D D ASES S
Sbjct: 489 VMDIAETAITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFASESANFS 548
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+S N +L L +
Sbjct: 549 KYNILAQSGSYAMSQRNAVQQNVLKLLQ 576
>gi|332533167|ref|ZP_08409036.1| flagellin [Pseudoalteromonas haloplanktis ANT/505]
gi|332037449|gb|EGI73903.1| flagellin [Pseudoalteromonas haloplanktis ANT/505]
Length = 319
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 41/233 (17%), Positives = 83/233 (35%), Gaps = 3/233 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN S+++A ++L + +L+ R+SSG R++ A D+AA I+ + S L+
Sbjct: 5 VNTNVSSLNAQRQLSNSGNSLDTSFQRLSSGFRINSAKDDAAGLQISDRLTSQINGLNQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ + + + ++ D +IQ E+ L S++
Sbjct: 65 NRNANDGISLAQTAEGALDEVTSMFQRMRTLAQQASNGSNTDEDRLAIQEEMRSLSSEVN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A ++F G+N L + A +V +++ +
Sbjct: 125 RVAGDTTFGGQNLLDGTYDAKFQVGADAVQTINFSMQTVGGSGNSLEANGGFTLSGIAGV 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233
G L + + + +G IS A A +
Sbjct: 185 AAGVTGNTLTELADGVSTISGEANTYTFADTFKAGDISVSTQANAQAVFAGMD 237
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 48/137 (35%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
TL D I + T T A + + + + + + +D+ I
Sbjct: 182 AGVAAGVTGNTLTELADGVSTISGEANTYTFADTFKAGDISVSTQANAQAVFAGMDSLIA 241
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
++G++ +R + + + R+ D D A E+ L+ +Q QQ +
Sbjct: 242 VVDKKRAELGAVQNRFQSTIRNQSNISENLSAAQSRIKDTDFAQETANLTKMQILQQASQ 301
Query: 434 QALSIVNNSTARILSLF 450
LS N LSL
Sbjct: 302 TILSQANQRPQAALSLL 318
>gi|259908156|ref|YP_002648512.1| Flagellin [Erwinia pyrifoliae Ep1/96]
gi|224963778|emb|CAX55279.1| Flagellin [Erwinia pyrifoliae Ep1/96]
gi|283478076|emb|CAY73992.1| flagellin, filament structural protein FliC [Erwinia pyrifoliae DSM
12163]
Length = 280
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 57/152 (37%), Gaps = 3/152 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSG R++ + D+AA +I+ + ++ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSMERLSSGSRITSSKDDAAGQAISNRITANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + +S + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALSGINNNLQRVRELTVQAKNGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
++ + FNG L D A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNAMKIQVGANDNET 155
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 39/90 (43%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ ++ +D I +G++ +R+ + + R+ DAD A+E + +
Sbjct: 191 DPLTLLDKAIASVDKLRSGLGAVQNRLDSAVTNLNNTTTNLSSAQSRIQDADYATEVSNM 250
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFRG 452
S Q QQ L+ N ++LSL +G
Sbjct: 251 SKAQIIQQAGNSVLAKANQVPQQVLSLLQG 280
>gi|299538012|ref|ZP_07051298.1| flagellin [Lysinibacillus fusiformis ZC1]
gi|298726594|gb|EFI67183.1| flagellin [Lysinibacillus fusiformis ZC1]
Length = 276
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 31/257 (12%), Positives = 77/257 (29%), Gaps = 3/257 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M+ + + R+SSG R++ AAD+ A +I++ M++ L+ + I G
Sbjct: 10 MAILNNMNRHYGTMSKAMLRISSGYRINSAADDPAGLAISEKMRAQIRGLNMAAKNIQDG 69
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSS 127
S V A+ +++ ++ ++ D K + E +L+ +++ + +
Sbjct: 70 ISLVQTAEGALNETHAMIQRMRELAVEAANDTLTDDDRKKLDLEFQELKKEIQRTSTDTE 129
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
FN + L D ++ I + + D + +
Sbjct: 130 FNTKTLLNGDYETNGIKILAGANAGQSIELFINGMGSEKLGLKDASIATREEAEKAMSSM 189
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ + + + + + + A + A K
Sbjct: 190 DEALKQVSNERSRLGAYQNRLEHAYNANVNTAENLQAAESRIRDADIAKEMMTMVKAQIL 249
Query: 248 IPVPLPAAPAAPNTTSG 264
+
Sbjct: 250 MQAGQYVLAMHMQQAQS 266
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 38/96 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ E+ +S +D +K + ++G+ +R+ + + ++ R+ DAD
Sbjct: 176 IATREEAEKAMSSMDEALKQVSNERSRLGAYQNRLEHAYNANVNTAENLQAAESRIRDAD 235
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+A E + Q Q L++ IL L
Sbjct: 236 IAKEMMTMVKAQILMQAGQYVLAMHMQQAQSILKLL 271
>gi|94500249|ref|ZP_01306782.1| Flagellin and related hook-associated protein [Oceanobacter sp.
RED65]
gi|94427548|gb|EAT12525.1| Flagellin and related hook-associated protein [Oceanobacter sp.
RED65]
Length = 412
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/440 (10%), Positives = 111/440 (25%), Gaps = 41/440 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + + + + + Q ++SSG RV AD+ + ++ D
Sbjct: 3 ISTMQQFNSGLRSILNNQESTQRTQQQISSGRRVLTPADDPIAATQILQLQQDISLRDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
I +++++ + + ID + I+ D I SEI + L
Sbjct: 63 EKNITSARNRLNLEDSILGGVIDNIDRIRELTVNAGNGSMTKEDRGYIASEIEERLDALV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
D+ + G + + G + D+G+ + + + +
Sbjct: 123 DLMNTKDASNTYIFGGFKGETVPFQERPGGGVTYQGDDGERFLEISNSTKIQTSDTGKNI 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + V D + +
Sbjct: 183 FVDVQSAQNTFYTRDNERNLGTGFISNGFVMDQEAYDEFYPEDIVIRFNPDGFITPPGPN 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + P+ + K + + + + + + T
Sbjct: 243 FSVLSQSDNRPIDGLAGVAYSPGTELVVKGAAFKIAGQPEQGDSFFVTSSPKQSLTDTVA 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+
Sbjct: 303 SLMEGLRTLEDNPEQSAQLDVLIENT---------------------------------- 328
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ +D + ++G + + E K + + + +L D D A +
Sbjct: 329 ----LNNLDFAQTSVSEVRSEVGGRLNTVDNIESLHKDVDLVSQDILSQLQDVDFAEAVS 384
Query: 421 RLSALQTQQQLAVQALSIVN 440
RLS + + Q+ + +N
Sbjct: 385 RLSLESLLLEASQQSFAQIN 404
>gi|226327709|ref|ZP_03803227.1| hypothetical protein PROPEN_01582 [Proteus penneri ATCC 35198]
gi|225203413|gb|EEG85767.1| hypothetical protein PROPEN_01582 [Proteus penneri ATCC 35198]
Length = 161
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 63/156 (40%), Gaps = 3/156 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN+ ++ L L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNYLSLVTQNNLNKSQGALGSAIERLSSGLRINSAKDDAAGQAIANRFTSNVNGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + +++ + + I+ +D SIQ E+ + ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRIRELTVQAKNGTNSNSDITSIQEEVKERLGEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR 155
I+ + FNG L + T + + +
Sbjct: 124 NRISEQTQFNGVKVLSGEKAEMTIQVGTNDKKNNQN 159
>gi|328949180|ref|YP_004366517.1| flagellin domain protein [Treponema succinifaciens DSM 2489]
gi|328449504|gb|AEB15220.1| flagellin domain protein [Treponema succinifaciens DSM 2489]
Length = 286
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 74/201 (36%), Gaps = 3/201 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N SAM A + + N + +++SSG++++ A D+A+ ++++ M+S L+
Sbjct: 2 VINHNMSAMFAQRSQGLTDLNNQKNMEKLSSGMKINRAGDDASGLAVSEKMRSQIRGLNQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
S G S + + + + D++ I+ D IQ E++ L +++
Sbjct: 62 ASTNAKNGISFIQTTEGYLQETEDIIQRIRELAVQSSNGIYTDEDRMQIQVEVSSLIAEV 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FNG N L T + + N + + + L +
Sbjct: 122 DRIASCAQFNGMNMLTGRFARPTGENSVTASMWLHIGANMDQRTQVYIGTMSATALGLRA 181
Query: 180 STDGTERYGLLDRNHKIKVEP 200
+
Sbjct: 182 VGTEEIMTLESPDEANRAIGT 202
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 36/95 (37%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ +D IK +G+ +R+ + + + ++ R+ D DMA
Sbjct: 192 SPDEANRAIGTLDEAIKKINKQRADLGAYQNRLEKTVVGLDIGAENLQASESRIRDTDMA 251
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + Q Q L+ N S+ +LSL +
Sbjct: 252 KEMVDFTKNQVLSQAGTAMLAQANQSSQNVLSLLQ 286
>gi|153001462|ref|YP_001367143.1| flagellin domain-containing protein [Shewanella baltica OS185]
gi|160876192|ref|YP_001555508.1| flagellin domain-containing protein [Shewanella baltica OS195]
gi|151366080|gb|ABS09080.1| flagellin domain protein [Shewanella baltica OS185]
gi|160861714|gb|ABX50248.1| flagellin domain protein [Shewanella baltica OS195]
gi|315268383|gb|ADT95236.1| flagellin domain protein [Shewanella baltica OS678]
Length = 271
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 42/262 (16%), Positives = 93/262 (35%), Gaps = 3/262 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M A + L L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSMKAQKNLNASGNALATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S IA+ M + +++ +++ +D +IQ+EI QL ++
Sbjct: 64 GMRNANDGISVAQIAEGAMQEQTNMLQRMRDLSVQAVNGANSTSDKDAIQAEIDQLALEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ ++F L + + + +G T L + S
Sbjct: 124 TAISNTTAFGDTKLLSGGFTAKNFQVGHQEGENISISISGTDASTLGVEGLLVSSDGAAS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ G + + + + ++ +++ T S + +
Sbjct: 184 TSIGLIDTAIKTIDTQRAKLGATQNRLSHNISNSANTQSNVADAKSRIVDVDFAKETSAM 243
Query: 240 DQAKGIATIPVPLPAAPAAPNT 261
+ + + + A
Sbjct: 244 TKNQVLQQTGSAMLAQANQLPQ 265
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 37/96 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ A + IDT IK K+G+ +R+ + V R+VD D
Sbjct: 176 VSSDGAASTSIGLIDTAIKTIDTQRAKLGATQNRLSHNISNSANTQSNVADAKSRIVDVD 235
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A E++ ++ Q QQ L+ N LSL
Sbjct: 236 FAKETSAMTKNQVLQQTGSAMLAQANQLPQVALSLL 271
>gi|48716112|dbj|BAD22844.1| flagellin [Campylobacter lari]
Length = 568
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 78/211 (36%), Gaps = 3/211 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNVASLNAQANANLNSRALDTSLSRLSSGLRINSAADDASGMAIADSLRSQASTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 64 INNGNDALGILQTADKAMDEQLKILDTIKVKATQAAQDGQSTKTRNMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + I S + ++ DS
Sbjct: 124 NIANTTAFNGKQLLSGGFTNQEFQIGSQSNQSIKATIGATQSSKIGVTRFETGSMSKDSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ + + +
Sbjct: 184 IAQLTIKNYNGIDDFKFQPVVISTSVGTGMG 214
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 44/143 (30%)
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+V S + S + + +I ++
Sbjct: 426 YNSTEALAFVTAFSIAFGTGASTGWSSQSANFVTSASIAAKDQQAGVTTLKGAMAVMDIA 485
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
+T I +G++ ++I + I + + ++ + D D A+ES +
Sbjct: 486 ETAITNLDQIRADLGAVQNQITATLNNISVTQVNIKSAESNIRDVDFAAESANFAKFNIL 545
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
Q A+S N ++ L +
Sbjct: 546 AQSGSYAMSQANAVQQNVMRLLQ 568
>gi|172058440|ref|YP_001814900.1| flagellin domain-containing protein [Exiguobacterium sibiricum
255-15]
gi|171990961|gb|ACB61883.1| flagellin domain protein [Exiguobacterium sibiricum 255-15]
Length = 296
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 3/175 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A+ A + L N++ D++SSG +++ AD+AA +I++ M++ AL
Sbjct: 3 ISNNVQALKAYRNLSANQLNVKTTMDKLSSGQKINRGADDAAGLAISEKMRNRLKALDKA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQSQLR 120
+ G S V + G+S+ +++ ++ D +IQ EI QL +++
Sbjct: 63 EQNVLDGISMVQTVEGGLSETHNLLQRMRELAVQAGNGTLATEDRTAIQEEINQLTNEVS 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
IA + FNG+ L G A ++ G+ + + + T
Sbjct: 123 RIAETTQFNGKKLLTGGYGKDNAVFIQTNAGASEGISLTINDMRARNIGIASTTQ 177
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 40/135 (29%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
D + + + + + E+ +S I
Sbjct: 161 TINDMRARNIGIASTTQLNENVRPLDFPSDDGTPEYALSVMTSSDAEQAISLYTKAIDTI 220
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ ++G+I +R + + ++ + R+ D DMA E + Q +
Sbjct: 221 SQQRAQLGAIQNRFEAMSSVLSVSKENLTASESRIRDTDMAREMMEYAKYNILNQSGMAM 280
Query: 436 LSIVNNSTARILSLF 450
++ N +L L
Sbjct: 281 IAQANALPQGVLQLL 295
>gi|162418290|ref|YP_001606493.1| flagellin [Yersinia pestis Angola]
gi|162351105|gb|ABX85053.1| flagellin [Yersinia pestis Angola]
Length = 160
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 63/150 (42%), Gaps = 3/150 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQS 117
+ + G S + +++ + + ++ S SIQ EI+ +
Sbjct: 61 TQAARNANDGISIAQTTEGSLNEINNNLQRVRELTVQAQNGSNSSSDLDSIQDEISLRLA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAK 147
++ ++ + FNG+ L + S A
Sbjct: 121 EIDRVSDQTQFNGKKVLAENTTMSIQVGAN 150
>gi|301165451|emb|CBW25022.1| fliC2 [Bacteriovorax marinus SJ]
Length = 277
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 81/203 (39%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++ S + L +++ + +++SSG RV+ A+D+AA +IA +K+ L
Sbjct: 5 IATNMASQSVQKNLSEVSTKSQASLEKLSSGKRVNKASDDAAGLAIATNLKAQTKGLRQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ G S V A+ G+++ +++ ++ + + E QL +++
Sbjct: 65 TRNANDGVSMVQTAEGGLNEVSNILVRLRELTVQASSDTVGEAERGFLDKEYQQLTTEVD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++FNG N L + G + + G R + + +
Sbjct: 125 RIAESTTFNGTNLLNGEGGGTLDIQVGAFAGEQNRIEFDSDSANATADEIGIGGTSIADK 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
D + +D + +
Sbjct: 185 GDALDAIENIDSAIQAVSGHRAN 207
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 39/96 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+K + + ID+ I+ + +GSI SR+ ++ + + D D
Sbjct: 181 IADKGDALDAIENIDSAIQAVSGHRANLGSIQSRLQSTVANLETQAINQDSARSVIEDVD 240
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+A+E+ +++ + V +L+ N L L
Sbjct: 241 VAAETANMASNNVVKNAGVASLAQANQIPNSALRLI 276
>gi|48716116|dbj|BAD22846.1| flagellin [Campylobacter lari]
Length = 568
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 78/211 (36%), Gaps = 3/211 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNVASLNAQANANLNSRALDTSLSRLSSGLRINSAADDASGMAIADSLRSQASTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 64 INNGNDALGILQTADKAMDEQLKILDTIKVKATQAAQDGQSTKTRNMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + I S + ++ DS
Sbjct: 124 NIANTTAFNGKQLLSGGFTNQEFQIGAQSNQSIKATIGATQSSKIGVTRFETGSMSNDSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ + + +
Sbjct: 184 IAQLTIKNYNGIDDFKFQPVVISTSVGTGMG 214
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 43/143 (30%)
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+V S + + + NI ++
Sbjct: 426 YNSTEALAFVTAFSIAFGTGSSANGRSQFANFVASANIAAKDQQAGVTTLKGAMAVMDIA 485
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
+T I +G++ ++I + I + + ++ + D D A+ES +
Sbjct: 486 ETAITNLDQIRADLGAVQNQITATLNNISVTQVNIKSAESNIRDVDFAAESANFAKFNIL 545
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
Q A+S N ++ L +
Sbjct: 546 AQSGSYAMSQANAVQQNVMRLLQ 568
>gi|323706352|ref|ZP_08117917.1| flagellin domain protein [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323534314|gb|EGB24100.1| flagellin domain protein [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 272
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 3/161 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN SA++A + L N N + ++SSG R++ AAD+AA +I++ MK+ L
Sbjct: 2 VINTNLSAINAWRALETNNTNTQKALQKLSSGYRINSAADDAAGLAISEKMKAQIAGLDQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G S + A+ +++ ++ ++ + D +IQ EI QL++++
Sbjct: 62 AQRNAQDGISLLQTAEGALNETTSILQRMRELVVQASNDTNTNEDKVNIQKEIDQLKNEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
IA + FN +N L + A S +
Sbjct: 122 NRIATTTQFNTKNLLDGTANVTLQIGANSNQTINVAIGRMT 162
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 17/169 (10%), Positives = 49/169 (28%)
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
+ + + + + + + A V ++ +
Sbjct: 99 NDTNTNEDKVNIQKEIDQLKNEINRIATTTQFNTKNLLDGTANVTLQIGANSNQTINVAI 158
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+ + + + +++ + A ++ + ID I + +G+ +
Sbjct: 159 GRMTASALKASAAAMSIASIFVGSAGASVTAASISAQIDVIDKAINQVSGQRADLGAYQN 218
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
R+ + + + + R+ D DMA E + Q A L
Sbjct: 219 RLEHTINNLGTASENLTAANSRIRDVDMAQEMMEFTKDNILNQAATAML 267
>gi|302875228|ref|YP_003843861.1| flagellin domain-containing protein [Clostridium cellulovorans
743B]
gi|302578085|gb|ADL52097.1| flagellin domain protein [Clostridium cellulovorans 743B]
Length = 274
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N +AM+A + + N + +++SSGLR++ A D+AA SI++ M++ L+
Sbjct: 2 VINHNLNAMNAQRNMSINNGSAAKSMEKLSSGLRINRAGDDAAGLSISEKMRAQIRGLNQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
S G S + A+ +++ ++ ++ D +I+SE+T L +++
Sbjct: 62 ASRNAQDGISLIQTAEGALNETQSILQRMRELAVQAANDTNVAVDRDAIKSELTTLTTEI 121
Query: 120 RDIARGSSFNGENWLRTDLG 139
IA + FN +N L L
Sbjct: 122 DRIANTTQFNEKNLLNGSLS 141
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 38/97 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ I+T IK + +G+ +R+ + + ++ R+ D D
Sbjct: 178 VSSNSGATAAITSINTAIKTVSTQRSSLGANQNRLEHTIANLDNASENLQAAESRVRDVD 237
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + QQ A LS N + +L L R
Sbjct: 238 MAKEMMSFTKNNILQQAAQAMLSQANQAPQNVLQLLR 274
>gi|157415575|ref|YP_001482831.1| flagellin [Campylobacter jejuni subsp. jejuni 81116]
gi|166215082|sp|P22252|FLB_CAMJ8 RecName: Full=Flagellin B
gi|6694398|gb|AAF25216.1|AF202168_3 flagellin B [Campylobacter jejuni]
gi|157386539|gb|ABV52854.1| hypothetical protein C8J_1255 [Campylobacter jejuni subsp. jejuni
81116]
Length = 576
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 92/279 (32%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNSNELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFTNQEFQIGASSNQTIKATIGATQSSKIGVTRFETGAQSFTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + + + I+ K + +K
Sbjct: 185 VVGLTIKNYNGIEDFKFDNVVISTSVGTGLGALAEEINKSADKTGVRATYDVKTTGVYAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ + N G + + S +
Sbjct: 245 KEGTTSQDFAINGVVIGQINYKDGDNNGQLVSAINAVKD 283
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/328 (10%), Positives = 79/328 (24%)
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F + + ++ + + + D D
Sbjct: 249 TSQDFAINGVVIGQINYKDGDNNGQLVSAINAVKDTTGVQASKDENGKLVLTSADGRGIK 308
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + V IS + + ++ +
Sbjct: 309 ITGDIGVGSGILANQKENYGRLSLVKNDGRDINISGTNLSAIGMGTTDMISQSSVSLRES 368
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A G + SA G+ + S +
Sbjct: 369 KGQISATNADAMGFNSYKGGGKFVFTQNVSSISAFMSAQGSGFSRGSGFSVGSGKNLSVG 428
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + +T + S ++ T T
Sbjct: 429 LSQGIQIISSAASMSNTYVVSAGSGFSSGSGNSQFAALKTTAANTTDETAGVTTLKGAMA 488
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ +T I IGS+ +++ + + I + + V+ + D D ASES S
Sbjct: 489 VMDIAETAITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFASESANFS 548
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+S N +L L +
Sbjct: 549 KYNILAQSGSYAMSQANAVQQNVLKLLQ 576
>gi|330829152|ref|YP_004392104.1| flagellin-like protein [Aeromonas veronii B565]
gi|328804288|gb|AEB49487.1| Flagellin-like protein [Aeromonas veronii B565]
Length = 286
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 76/204 (37%), Gaps = 3/204 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN S++++ + L + N L+ R+SSGLR++ A D+AA I+ + S L+
Sbjct: 5 VNTNVSSINSQRNLYNTNKALDTAYQRLSSGLRINTAKDDAAGLQISNRLTSQINGLNQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + + ++ D +IQ E+ QL +++
Sbjct: 65 NRNANDGISLAQTAEGAMEEITGMFQRMRVLAEQSANGSNTNADRSAIQQEVRQLATEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ ++F G L A + + + ++
Sbjct: 125 RIAKDTTFGGTKLLDGAYKGIFQVGADAKQTISFTLSQAGGFSISGLGAAASVATVFGTA 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLK 204
+ ++ V+ + +
Sbjct: 185 ATLSVSTQSNAQSVLGAVDKMIAR 208
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 39/98 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + ++ +D I + ++G+I +R+ + + V R+ DAD
Sbjct: 189 VSTQSNAQSVLGAVDKMIARVDSKRAELGAIQNRMESTIRNQANIAENVSAARSRIRDAD 248
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
A E+ L+ QQ A L N L L RG
Sbjct: 249 FAQETATLTQYNILQQAASTVLGQANQRPNGALQLLRG 286
>gi|146282224|ref|YP_001172377.1| putative flagellin protein [Pseudomonas stutzeri A1501]
gi|145570429|gb|ABP79535.1| putative flagellin protein [Pseudomonas stutzeri A1501]
Length = 255
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 41/97 (42%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
N L E+M+ ID IK G++ +R ++ + + V GR+ D D
Sbjct: 159 TNTALTTEDMLESIDNAIKDIDTQRATFGAVQNRFDNTIANLQNIAENVSAARGRIQDTD 218
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+E+ LS Q QQ L+ +LSL +
Sbjct: 219 FAAETANLSKNQILQQAGTAILAQAKQLPQAVLSLLQ 255
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 70/202 (34%), Gaps = 3/202 (1%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
R+S+G R++ A D+AA I+ + S L+ G S A+ + ++ ++
Sbjct: 1 MQRLSTGSRINSAKDDAAGLQISNRLTSQINGLNVAVRNANDGISMAQTAEGALQQSTNI 60
Query: 88 MSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ ++ + D S+Q E+ +LQ++L I+ +SF + ++G + ++
Sbjct: 61 LQRMRELVLQSGNGSNSDEDKASLQLEVAELQTELNRISGTTSFGTKKLFDENIGGTAST 120
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+G++ D+ V + D I + +
Sbjct: 121 EVSFQVGAYGSTDDVIKVDFGGPRDAGTLGVDVSKVNVTNTALTTEDMLESIDNAIKDID 180
Query: 205 DIDVSVYDASGTISTKKFKLAT 226
+ L
Sbjct: 181 TQRATFGAVQNRFDNTIANLQN 202
>gi|317130309|ref|YP_004096591.1| flagellin domain protein [Bacillus cellulosilyticus DSM 2522]
gi|315475257|gb|ADU31860.1| flagellin domain protein [Bacillus cellulosilyticus DSM 2522]
Length = 322
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 41/227 (18%), Positives = 81/227 (35%), Gaps = 3/227 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++ +++ ++ +++SSGLR++ A D+AA +I++ M++ L
Sbjct: 3 INNNIPALNTFRQMGANQNAMQNSMEKLSSGLRINRAGDDAAGLAISEKMRAQIRGLDQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ + + +++ ++ T D IQ EI +L S++
Sbjct: 63 SRNAQDGISMIQTAEGALQETQNILQRMRELATQAANDTNVGVDRNEIQKEINELTSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + L + IG+ + L + ++
Sbjct: 123 RIANTTEFNTQPMLNVSGAGGAGFSSTFQIGANQGQSMTIEIKSMTAESLGLQGGSGANA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
T G L V S + +A
Sbjct: 183 TAGASISALNTGKGAEDVTGAKFAAASGVSNGTSNNKTAAGLSVANH 229
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 32/307 (10%), Positives = 77/307 (25%)
Query: 144 SIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
+ + + + D + + R + +
Sbjct: 15 QMGANQNAMQNSMEKLSSGLRINRAGDDAAGLAISEKMRAQIRGLDQASRNAQDGISMIQ 74
Query: 204 KDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTS 263
+ ++ + + + T + A NT
Sbjct: 75 TAEGALQETQNILQRMRELATQAANDTNVGVDRNEIQKEINELTSEINRIANTTEFNTQP 134
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
+ S + S+T+ N + K+ G + A +
Sbjct: 135 MLNVSGAGGAGFSSTFQIGANQGQSMTIEIKSMTAESLGLQGGSGANATAGASISALNTG 194
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
K + + + A + + I+ I+ +A +G
Sbjct: 195 KGAEDVTGAKFAAASGVSNGTSNNKTAAGLSVANHTEASASIQVINNAIEAVSAQRSNLG 254
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
S +R+ + + ++ R+ D DMA E +++ Q + L+ N
Sbjct: 255 SFQNRLEHTISNLDNSSENLQAAESRIRDVDMAREVMQMTKNNILSQASQSMLAQANQQP 314
Query: 444 ARILSLF 450
+L L
Sbjct: 315 QSVLQLL 321
>gi|170791529|gb|ACB38406.1| flagellin A [Aeromonas eucrenophila]
Length = 299
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 67/160 (41%), Gaps = 3/160 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + + +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNMMNSTKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQVNGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D +++Q E+ QL +++
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSAKDREALQKEVDQLGAEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
I+ ++F G L G + A +
Sbjct: 125 RISTATTFAGTKLLDGSFGGTFQVGADANQTISFSLSQAD 164
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 48/111 (43%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
+ T+ + A + + + + +++ +D+ + ++G++ +R+ +
Sbjct: 188 ISTVFVGGSAGGISISSQSNAQNVLAAVDSMLTVVDGKRAELGAVQNRLDSTIRNQSNIS 247
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ V R+ DAD A+E+ ++ QQ A L+ N LSL +
Sbjct: 248 ENVSAARSRIRDADFATETANMTKQNILQQAASSILAQANQRPQSALSLLQ 298
>gi|48716102|dbj|BAD22839.1| flagellin [Campylobacter lari]
Length = 568
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 77/211 (36%), Gaps = 3/211 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNVASLNAQANANLNSRALDTSLSRLSSGLRINSAADDASGMAIADSLRSQASTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 64 INNGNDALGILQTADKAMDEQLKILDTIKVKATQAAQDGQSTKTRNMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I S + ++ S
Sbjct: 124 NIANTTSFNGKQLLSGGFTNQEFQIGSQSNQSIKATIGATQSSKIGVTRFETGSMSNTSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ + + +
Sbjct: 184 IAQLTIKNYNGIDDFKFQPVVISTSVGTGMG 214
Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 49/161 (30%)
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
+ + + G S V +V S + + + NI
Sbjct: 408 MSQGSGYSVGSGKNMSLVYNSTEALAFVTAFSIAFGTGASTGGASQFANFVASANIAAKD 467
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
++ +T I +G++ ++I + I + + ++ +
Sbjct: 468 QQAGVTTLKGAMAVMDIAETAITNLDQIRADLGAVQNQITRTLNNISVTQVNIKSAESNI 527
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D D A+ES + Q A+S N ++ L +
Sbjct: 528 RDVDFAAESANFAKFNILAQSGSYAMSQANAVQQNVMRLLQ 568
>gi|119503651|ref|ZP_01625734.1| Flagellin-like protein [marine gamma proteobacterium HTCC2080]
gi|119460713|gb|EAW41805.1| Flagellin-like protein [marine gamma proteobacterium HTCC2080]
Length = 402
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/435 (11%), Positives = 113/435 (25%), Gaps = 55/435 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ +N + + + L +Q++V+SG R+ + +D+ + ++S+ +
Sbjct: 5 VSSNQVYRTGIGSILEAQSKLSRIQEQVASGKRIQNPSDDPGAAAEIVRLRSELNRVETY 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG----TDSKSIQSEITQLQSQL 119
S + ++ ++ A V+ + G G +D + I +EI L+ L
Sbjct: 65 QRTADQAISSLSFEESAVAGAESVLQRARELAVQGANDGALNASDREIIAAEIDGLRDSL 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+I + +GE D
Sbjct: 125 LNIGNTRNADGEYIFAGD------------------------------------------ 142
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ + V + + + T + + AA
Sbjct: 143 ---------KVNTAAFSESNGAVTYEGSGGPRLVNIASGIRLQTNDTGATVFQGAAAGNG 193
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A + +S +
Sbjct: 194 QFEVSATGSNTGTGVVGATGFDGTFPGTENYTITFSSVGGQLKYAITGSTSGAIGAAQDY 253
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G + + T + D+ + T+ +
Sbjct: 254 VSGEDITFAGATVKIEGAPEAGDTFAVTAGGTQSAFDTLTELSAALRTQGSAAKDAQRAT 313
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A+ + + ID + +G+ +R+ Q +E + +L D D A+
Sbjct: 314 AVGQALQNIDASLGQINKVRTDLGARLNRVDEQISLNASFNFQIESTISKLEDLDFATAV 373
Query: 420 TRLSALQTQQQLAVQ 434
T L+ + A Q
Sbjct: 374 TELNLQLVALEAAQQ 388
>gi|121612455|ref|YP_001000996.1| flagellin [Campylobacter jejuni subsp. jejuni 81-176]
gi|87249924|gb|EAQ72883.1| flagellin B [Campylobacter jejuni subsp. jejuni 81-176]
Length = 576
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 92/279 (32%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNSNELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINKLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFTNQEFQIGASSNQTVKATIGATQSSKIGVTRFETGAQSFTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + + + I+ K + +K
Sbjct: 185 VVGLTIKNYNGIEDFKFDNVVISTSVGTGLGALAEEINKSADKTGVRATYDVKTTGVYAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ + N G + + S +
Sbjct: 245 KEGTTSQDFAINGVVIGQINYKDGDNNGQLVSAINAVKD 283
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/328 (10%), Positives = 79/328 (24%)
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F + + ++ + + + D D
Sbjct: 249 TSQDFAINGVVIGQINYKDGDNNGQLVSAINAVKDTTGVQASKDENGKLVLTSADGRGIK 308
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + V IS + + ++ +
Sbjct: 309 ITGDIGVGSGILANQKENYGRLSLVKNDGRDINISGTNLSAIGMGTTDMISQSSVSLRES 368
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A G + SA G+ + S +
Sbjct: 369 KGQISATNADAMGFNSYKGGGKFVFTQNVSSISAFMSAQGSGFSRGSGFSVGSGKNLSVG 428
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + +T + S ++ T T
Sbjct: 429 LSQGIQIISSAASMSNTYVVSAGSGFSSGSGNSQFAALKTTAANTTDETAGVTTLKGAMA 488
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ +T I IGS+ +++ + + I + + V+ + D D ASES S
Sbjct: 489 VMDIAETAITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFASESANFS 548
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+S N +L L +
Sbjct: 549 KYNILAQSGSYAMSQANAVQQNVLKLLQ 576
>gi|182418345|ref|ZP_02949640.1| flagellin [Clostridium butyricum 5521]
gi|237666948|ref|ZP_04526933.1| flagellin [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182377727|gb|EDT75271.1| flagellin [Clostridium butyricum 5521]
gi|237658147|gb|EEP55702.1| flagellin [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 270
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/263 (17%), Positives = 94/263 (35%), Gaps = 3/263 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N +AM+A ++++ +++SSGLR++ A D+AA +I++ M+S L+
Sbjct: 2 VISHNLNAMNAHRQMKSNTTQTGKAIEKLSSGLRINRAGDDAAGLAISEKMRSQIRGLNQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
S G S V + +++ ++ +K T D K IQ E++QL S++
Sbjct: 62 GSTNAQDGISMVQTTEGALTETHSMLQRLKTLATQSANGTYIDSDRKLIQKEVSQLTSEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA+ + FNG L S + + L + S
Sbjct: 122 TRIAQQTEFNGNTVLNKSGTSFDFQVGNKSGQVISITMKKMDSGSLGVSGLSMSSKTNAS 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T + + V ++ ++ T + + + +
Sbjct: 182 KALSTIEKAINKVSEHRATLGAVQNRLEHTIASTDTTSENIQASESRIRDTDMAKEMMEY 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTT 262
++ + + A + +
Sbjct: 242 TKSNILTQAAQSMLAQANSAPNS 264
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 39/97 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ K + +S I+ I + +G++ +R+ + ++ R+ D D
Sbjct: 174 MSSKTNASKALSTIEKAINKVSEHRATLGAVQNRLEHTIASTDTTSENIQASESRIRDTD 233
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + Q A L+ N++ +LSL +
Sbjct: 234 MAKEMMEYTKSNILTQAAQSMLAQANSAPNSVLSLLQ 270
>gi|302338405|ref|YP_003803611.1| flagellin domain protein [Spirochaeta smaragdinae DSM 11293]
gi|301635590|gb|ADK81017.1| flagellin domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 290
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 77/203 (37%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+ A ++ + N +++ +++SSGLR++ A D+A+ ++++ M+S L
Sbjct: 3 INHNMSAIFAQRQNKFNNLSVDKNMEKLSSGLRINRAGDDASGLAVSEKMRSQIRGLVQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + + + + D++ ++ D IQ EI+QL ++
Sbjct: 63 ERNAQNGISFIQSTEGYLQETQDILQRMRELAVQSSNGVYTDEDRMQIQVEISQLVDEVN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG N L T + + N + + + + +
Sbjct: 123 RIASHAQFNGMNMLTGRFARETGENSVTASMWLHIGANMDQRERIFIGTMTAQGLGIQGL 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
+ + +
Sbjct: 183 GAMAHAATFISMSTPDSANISIS 205
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 22/162 (13%), Positives = 52/162 (32%)
Query: 290 RATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRH 349
+ N +T + + ++ + +
Sbjct: 129 QFNGMNMLTGRFARETGENSVTASMWLHIGANMDQRERIFIGTMTAQGLGIQGLGAMAHA 188
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
A + + + +S ID+ ++ +G+ +R+ + + + ++ R
Sbjct: 189 ATFISMSTPDSANISISVIDSALRKVNKQRADLGAYQNRLEHATRGLAVGSENLQAAESR 248
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D DMA E R + Q Q + L+ N T +L L +
Sbjct: 249 IRDTDMADEMVRYTKNQILVQSSTAMLAQANTKTQSVLQLLQ 290
>gi|268638420|gb|ACZ17545.1| flagellin B [Campylobacter jejuni]
Length = 580
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 75/208 (36%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNANELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + + I + + + + S
Sbjct: 125 NIANTTAFNGKQLLSGNFTNQEFQIGSQSNQTIKASIGPTQSSKIGVTRFETGSQSVTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ +
Sbjct: 185 VVSMVIKNYNGVEDFKFQSIVISTSVGT 212
Score = 96.3 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 36/97 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + + I + + V+ + D D
Sbjct: 484 VTTLKGAMAVMDIAETAINNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVD 543
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ASES S Q A+S N +L L +
Sbjct: 544 FASESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 580
>gi|315932083|gb|EFV11032.1| flagellin subunit protein FlaB [Campylobacter jejuni subsp. jejuni
327]
Length = 251
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 77/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNANELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFTNQEFQIGSSSNQTIKASIGPTQSSKIGVTRFETGSQSVSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
G + +
Sbjct: 185 VVGLTIKNYNGIEDFKFDNVVISTSVGT 212
>gi|167005900|ref|ZP_02271658.1| hypothetical protein Cjejjejuni_07035 [Campylobacter jejuni subsp.
jejuni 81-176]
Length = 576
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 92/279 (32%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNSNELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINKLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFTNQEFQIGASSNQTVKATIGATQSSKIGVTRFETGAQSFTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + + + I+ K + +K
Sbjct: 185 VVGLTIKNYNGIEDFKFDNVVISTSVGTGLGALAEEINKSADKTGVRATYDVKTTGVYAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ + N G + + S +
Sbjct: 245 KEGTTSQDFAINGVVIGQINYKDGDNNGQLVSAINAVKD 283
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/328 (11%), Positives = 79/328 (24%)
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F + + ++ + + + D D
Sbjct: 249 TSQDFAINGVVIGQINYKDGDNNGQLVSAINAVKDTTGVQASKDENGKLVLTSADGRGIK 308
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + V IS + + ++ +
Sbjct: 309 ITGDIGVGSGILANQKENYGRLSLVKNDGRDINISGTNLSAIGMGTTDMISQSSVSLRES 368
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A G + SA G+ + S +
Sbjct: 369 KGQISATNADAMGFNSYKGGGKFVFTQNVSSISAFMSAQGSGFSRGSGFSVGSGKNLSVG 428
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + +T + S ++ T T
Sbjct: 429 LSQGIQIISSAASMSNTYVVSAGSGFSSGSGNSQFAALKTTAANTTDETAGVTTLKGAMA 488
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ +T I IGSI +++ + + I + + V+ + D D ASES S
Sbjct: 489 VMDIAETAITNLDQIRADIGSIQNQLQVTINNITVTQVNVKAAESTIRDVDFASESANFS 548
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+S N +L L +
Sbjct: 549 KYNILAQSGSYAMSQANAVQQNVLKLLQ 576
>gi|332533165|ref|ZP_08409034.1| flagellin [Pseudoalteromonas haloplanktis ANT/505]
gi|332037447|gb|EGI73901.1| flagellin [Pseudoalteromonas haloplanktis ANT/505]
Length = 319
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 82/233 (35%), Gaps = 3/233 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN S+++A ++L +L+ R+SSG R++ A D++A IA + S L+
Sbjct: 5 VNTNVSSLNAQRQLSKSGNSLDTSFQRLSSGFRINSAKDDSAGMQIANRLTSQVNGLNQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ + + + I+ D ++Q EI L ++
Sbjct: 65 NRNANDGISLAQTAEGALDEVTSMFQRIRTLAQQASNGSNTDEDRLAVQEEIRSLSEEVN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A ++F G+N L + A +V +++ + S
Sbjct: 125 RVAADTTFGGQNLLDGTYDAKFQVGADAVQTINFSMQTVGGSGNSLEANGGFTLSGIASV 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233
G L + + + +G IS A A +
Sbjct: 185 AAGVTGNTLTELADGVSTISGEANTYTFADTFKAGDISVSTQANAQAVFAGMD 237
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 48/137 (35%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
TL D I + T T A + + + + + + +D+ I
Sbjct: 182 ASVAAGVTGNTLTELADGVSTISGEANTYTFADTFKAGDISVSTQANAQAVFAGMDSLIA 241
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
++G++ +R + + + R+ D D A E+ L+ +Q QQ +
Sbjct: 242 VVDKKRAELGAVQNRFQSTIRNQSNISENLSAARSRIQDTDFAQETANLTKMQILQQASQ 301
Query: 434 QALSIVNNSTARILSLF 450
LS N LSL
Sbjct: 302 SILSQANQRPQVALSLL 318
>gi|48716118|dbj|BAD22847.1| flagellin [Campylobacter lari]
Length = 568
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 77/211 (36%), Gaps = 3/211 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNVASLNAQANANLNSRALDTSLSRLSSGLRINSAADDASGMAIADSLRSQASTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 64 INNGNDALGILQTADKAMDEQLKILDTIKVKATQAAQDGQSTKTRNMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + I S + ++ S
Sbjct: 124 NIANTTAFNGKQLLSGGFTNQEFQIGAQSNQSIKATIGATQSSKIGVTRFETGSMSNTSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ + + +
Sbjct: 184 IAQLTIKNYNGIDDFKFQPVVISTSVGTGMG 214
Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 49/161 (30%)
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
+ + + G S V +V S + + + NI
Sbjct: 408 MSQGSGYSVGSGKNMSLVYNSTEALAFVTAFSIAFGTGSSANGASQFANFVASANIAAKD 467
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
++ +T I +G++ ++I + I + + ++ +
Sbjct: 468 QQAGVTTLKGAMAVMDIAETAITNLDQIRADLGAVQNQITATLNNISVTQVNIKSAESNI 527
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D D A+ES + Q A+S N ++ L +
Sbjct: 528 RDVDFAAESANFAKFNILAQSGSYAMSQANAVQQNVMRLLQ 568
>gi|254478851|ref|ZP_05092216.1| Bacterial flagellin N-terminus domain protein [Carboxydibrachium
pacificum DSM 12653]
gi|214035213|gb|EEB75922.1| Bacterial flagellin N-terminus domain protein [Carboxydibrachium
pacificum DSM 12653]
Length = 284
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + L N + V +++SSG R++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLSALNAWRALSINTANTQKVLEKLSSGYRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ + D ++IQ EI QL++++
Sbjct: 63 MRNAQDGISLIQTAEGALNEVHAILQRMRELVVQAANDTNTLTDRQNIQKEIDQLKAEID 122
Query: 121 DIARGSSFNGENWLRTD 137
IA + FN N L
Sbjct: 123 RIASTTQFNTRNLLNGS 139
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 44/137 (32%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + S + + I+ + A N + ++ ID I
Sbjct: 148 VFQIGANSQQVLKLNIATMTAAALKGTAAGAISMASINVATNNASVISAQINSIDAAINK 207
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ +G++ +R+ + + + + R+ D DMA + Q A
Sbjct: 208 VSGQRADLGAVQNRLEHTINNLGTASENLTAAESRIRDVDMAKAMMEFTKDNILNQAATA 267
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +L L R
Sbjct: 268 MLAQANQLPQTVLQLLR 284
>gi|87242476|gb|ABD33777.1| flagellin [Bacillus thuringiensis serovar muju]
Length = 359
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/253 (17%), Positives = 95/253 (37%), Gaps = 3/253 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ +++ + +R + DR+SSG R+++A+D+AA +IA M++ L+
Sbjct: 1 INTDINSLRTQEYMRQNQSKMSNSMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVA 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + M+ +++ +++ ++ ++Q E +LQ Q+
Sbjct: 61 ANNTQDGMSLIRTADSAMNSVSNILLRMRDIANQSANGTNTDSNKSALQKEFVELQKQIT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L+ D ++ S I D V + + ++
Sbjct: 121 YIADNTQFNDKNLLKEDSAVKIQTLDSSSAAQQIGIDLKGVTLDKLGIDKISIGGAATTA 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ T+ + + + V DI + K T L
Sbjct: 181 IEQTDIDAVTTGIGALTKDSTVATDIKAIKDSFDKIKAGMDAKDVTAIETALNGFKEGQT 240
Query: 241 QAKGIATIPVPLP 253
A +
Sbjct: 241 TATAAGVDAITAA 253
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 44/140 (31%)
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
++T + L A +K+ V ID
Sbjct: 220 MDAKDVTAIETALNGFKEGQTTATAAGVDAITAALAGATLPTATAAADKVDALAAVEAID 279
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ +G+ +R+ + +K ++ ++ DADMA E + ++ +
Sbjct: 280 KALTTVADNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILN 339
Query: 430 QLAVQALSIVNNSTARILSL 449
+ + LS N + + L
Sbjct: 340 EAGISMLSQANQTPQMVSKL 359
>gi|170791521|gb|ACB38402.1| flagellin A [Aeromonas bivalvium]
Length = 305
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 70/208 (33%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + + +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNMTNSTKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E+ QL +++
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSDKDRVALQKEVDQLGAEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ ++F G L S A + + + +
Sbjct: 125 RISTATTFAGTKLLDGSFKGSFQVGADANQTIGFSLTQADGFSISGIAAAGTTVDVKVGA 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ +
Sbjct: 185 NGSLTSTNDISDIFTGGGAGGISISTQA 212
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 56/140 (40%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ + TT+D + + S + + A + + + +++++ D +
Sbjct: 166 FSISGIAAAGTTVDVKVGANGSLTSTNDISDIFTGGGAGGISISTQAGAQKVLAAADAML 225
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ ++G++ +R+ + + V R+ DAD A+E+ ++ QQ A
Sbjct: 226 EVVDGKRAELGAVQNRLDSTIRNQANISENVSAARSRIRDADFATETANMTKQNILQQAA 285
Query: 433 VQALSIVNNSTARILSLFRG 452
LS N LSL +G
Sbjct: 286 SSILSQANQRPQSALSLLQG 305
>gi|120261|sp|P18245|FLAB_CAMCO RecName: Full=Flagellin B; AltName: Full=Flagellin N
gi|144196|gb|AAA23023.1| flagellin [Campylobacter coli]
Length = 573
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/279 (18%), Positives = 95/279 (34%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGGFTNQEFQIGSSSNQTIKASIGATQSSKIGVTRFETGSQSFSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T G + + + + I+ K + +K+ A
Sbjct: 185 TVGLTIKNYNGIEDFKFDSVVISTSVGTGLGALAEEINRNADKTGIRATFDVKSVGAYAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + N G + + S +
Sbjct: 245 KAGNTSQDFAINGVVIGQINYNDGDNNGQLISAINAVKD 283
Score = 95.6 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 64/206 (31%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
I A G + + + + + G+ + S + +
Sbjct: 368 GQISAANADAMGFNAYNGGGAKQIIFASSIAGFMSQAGSGFSAGSGFSVGSGKNYSAILS 427
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+++ V + T + S ++ ++ H T ++
Sbjct: 428 ASIQIVSSARSISSTYVVSTGSGFSAGSGNSQFAALRISTVSAHDETAGVTTLKGAMAVM 487
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+T I IG++ +++ + + I + + V+ + D D A+ES S
Sbjct: 488 DIAETAITNLDQIRADIGAVQNQLQVTINNITVTQVNVKAAESTIRDVDFAAESANFSKY 547
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q A+S N +L L +
Sbjct: 548 NILAQSGSYAMSQRNAVQQNVLKLLQ 573
>gi|31321936|gb|AAM76286.1| FlaB [Campylobacter jejuni subsp. jejuni 81-176]
Length = 576
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 93/279 (33%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNSNELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINKLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFTNQEFQIGASSNQTVKATIGATQSSKIGVTRFETGAQSFTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + + + I+ K + +K
Sbjct: 185 VVGLTIKNYNGIEDFKFDNVVISTSVGTGLGALAEEINKSADKTGVRATYDVKTTGVYAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ + A N G + + S +
Sbjct: 245 KEGTTSQDFAINGVAIGQINYKDGDNNGQLVSAINAVKD 283
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/328 (10%), Positives = 78/328 (23%)
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F + ++ + + + D D
Sbjct: 249 TSQDFAINGVAIGQINYKDGDNNGQLVSAINAVKDTTGVQASKDENGKLVLTSADGRGIK 308
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + V IS + + ++ +
Sbjct: 309 ITGDIGVGSGILANQKENYGRLSLVKNDGRDINISGTNLSAIGMGTTDMISQSSVSLRES 368
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A G + SA G+ + S +
Sbjct: 369 KGQISATNADAMGFNSYKGGGKFVFTQNVSSISAFMSAQGSGFSRGSGFSVGSGKNLSVG 428
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + +T + S ++ T T
Sbjct: 429 LSQGIQIISSAASMSNTYVVSAGSGFSSGSGNSQFAALKTTAANTTDETAGVTTLKGAMA 488
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ +T I IGS+ +++ + + I + + V+ + D D ASES S
Sbjct: 489 VMDIAETAITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFASESANFS 548
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+S N +L L +
Sbjct: 549 KYNILAQSGSYAMSQANAVQQNVLKLLQ 576
>gi|254502132|ref|ZP_05114283.1| Bacterial flagellin N-terminus domain protein [Labrenzia alexandrii
DFL-11]
gi|222438203|gb|EEE44882.1| Bacterial flagellin N-terminus domain protein [Labrenzia alexandrii
DFL-11]
Length = 504
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 66/504 (13%), Positives = 152/504 (30%), Gaps = 54/504 (10%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I + + + L+ + VQ+++++G +V+ A DN + + A ++S L
Sbjct: 1 MSDITLSSAVRANLNTLQQTASFMSDVQNKLATGKKVNSALDNPSNFFTASGLQSRANDL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQ 118
+ D +G + A G++ ++ + K K + K ++ +L +Q
Sbjct: 61 GTLLDDMGQSVQTIKAADDGITAITKLVESAKAKANQALQTGSQYERKEFAAQYNELLTQ 120
Query: 119 LRDIARGSSFNGENWLRTD----------------------------------LGSSTAS 144
+ D+A+ + + G+N L +
Sbjct: 121 IEDVAKDAGYKGKNLLAGTGNDLRTIFNEDSTSKLDVSAVDYTDTTLSTGLNLSDLTEGQ 180
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ + + + T + + +
Sbjct: 181 GGATAFNLSGGKTTITLTGADGALNSSSTLNESTAISTTTTLEFTNVESSTPTLIGTTVS 240
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ------------------AKGIA 246
+ +T+ + + D A A
Sbjct: 241 NGASVQDLVDSLNATEGVRAEFDESNGELTIYSNQDFLISDTDTTATTALTIGSAASVNA 300
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
+ + + + G + + + + S T + + T S
Sbjct: 301 SALTSGSSLTDSGSFKVGDTITLTDGNNYELGSFEVEASSTVDDLNTFINDFNGVSSTFS 360
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ + S+ + D + + + +S
Sbjct: 361 GGRISVTSDTDLTINSSRDGTNNTDFGSEDFAATTNGSFSIAAQADSGFATDNDINRTIS 420
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
++ + A + G+ S + ++DF + + + +E+G G+L AD E L ALQ
Sbjct: 421 KLNNALGNLRTQASEFGTNLSIVENRQDFTRSLINTLEEGAGKLTLADTNEEGANLLALQ 480
Query: 427 TQQQLAVQALSIVNNSTARILSLF 450
T+QQLA +LS + + +L LF
Sbjct: 481 TRQQLASTSLSFASQADQNVLRLF 504
>gi|237751484|ref|ZP_04581964.1| flagellin a [Helicobacter bilis ATCC 43879]
gi|229372850|gb|EEO23241.1| flagellin a [Helicobacter bilis ATCC 43879]
Length = 516
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 56/512 (10%), Positives = 127/512 (24%), Gaps = 64/512 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKS-------- 55
+ TN +A++A L+ +++SSGLR++ AAD+A+ IA ++S
Sbjct: 5 VNTNINALNAHVNTVVTQRGLKDSLEKLSSGLRINKAADDASGMIIADSLRSQASALGQA 64
Query: 56 --------------------DNGALSAVSDAIGLGSSKVDIAKA-------------GMS 82
L V + ++ G+
Sbjct: 65 ISNTNDAMGIIQIADKAMDEQLKILDTVKVKATQAAQDGQTTESRRAIQSDITRLIQGLD 124
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRT------ 136
+ S K+ +G + + +++ +
Sbjct: 125 MIGNTTSFNGQKLLSGAFTNKEFQVGAYSNESIKASIGATTSDKIGQVRVATGGLITAAN 184
Query: 137 -----------------DLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ S+ + + + T
Sbjct: 185 TVKLTFKNVDGVNDVSLQSVKISTSVGTGIGVLAEVINKNSDKTGIRAVANVISTSDAMV 244
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + + V + + + T L +
Sbjct: 245 KSGTMSKVIINGITIGDINDIKAGDSDGRLVQAFNAVTNQTGVEAYTDERGRLNLRSVDG 304
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
K P + + +G + S Y R+ + + R S
Sbjct: 305 RGIKISMGANEKGQDGKVPPLSVTSMNGGQKLEGKGSENYGRLSLTRLDARDIVVMSAAD 364
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G + V T+ K + A
Sbjct: 365 AKGLYKAIGFDNQQVAKTVVNLRDTMGEFNKDVKSAAGANFNSVVASGGAALGAGVMTLR 424
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ ++ K +GS+ ++ + I + + V+ ++ + D A ES
Sbjct: 425 GAMVVMDIAESATKILDRIRADLGSVQGQMISTVNNISVTQVNVKAAESQIREVDFAQES 484
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ L Q A+S N ++ L +
Sbjct: 485 ANFNKLNILAQSGSYAMSQANAVQQHVIRLLQ 516
>gi|114054821|gb|ABI50011.1| FlaA [Clostridium botulinum]
Length = 268
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+ S
Sbjct: 1 NLNAMNAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQASRN 60
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIA 123
S + A+ +++ ++ ++ D +++Q E+ +LQS++ I+
Sbjct: 61 SQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEINRIS 120
Query: 124 RGSSFNGENWLRTDLGSSTASIA 146
+ FN ++ + + ++
Sbjct: 121 SQTQFNTKSLINGAVSEDAXAMT 143
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 45/131 (34%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D + T + + I + + + + + ++ ID I +
Sbjct: 138 DAXAMTFQIGANSGQTIKLTIGSMDAKTLKVDKIKLDDTAANVTKQIATIDNAINSVSKE 197
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 198 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 257
Query: 439 VNNSTARILSL 449
N + +L L
Sbjct: 258 ANQAPQGVLQL 268
>gi|154996969|gb|ABS89177.1| FlaB [Campylobacter jejuni]
Length = 576
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 92/279 (32%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNSNELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFTNQEFQIGASSNQTVKATIGATQSSKIGVTRFETGAQSFTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + + + I+ K + +K
Sbjct: 185 VVGLTIKNYNGIEDFKFDNVVISTSVGTGLGALAEEINKSADKTGVRATYDVKTTGVYAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ + N G + + S +
Sbjct: 245 KEGTTSQDFAINGVVIGQINYKDGDNNGQLVSAINAVKD 283
Score = 98.3 bits (242), Expect = 3e-18, Method: Composition-based stats.
Identities = 35/328 (10%), Positives = 78/328 (23%)
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F + + ++ + + + D D
Sbjct: 249 TSQDFAINGVVIGQINYKDGDNNGQLVSAINAVKDTTGVQASKDENGKLVLTSADGRGIK 308
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + V IS + + ++ +
Sbjct: 309 ITGDIGVGSGILANQKENYGRLSLVKNDGRDINISGTNLSAIGMGTTDMISQSSVSLRES 368
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A G + SA + + S +
Sbjct: 369 KGQISATNADAMGFNSYKGGGKFVFTQNVSSISAFMSAQDSGFSRGSGFSVGSGKNLSVG 428
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + +T + S ++ T T
Sbjct: 429 LSQGIQIISSAASMSNTYVVSAGSGFSSGSGNSQFAALKTTAANTTDETAGVTTLKGAMA 488
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ +T I IGS+ +++ + + I + + V+ + D D ASES S
Sbjct: 489 VMDIAETAITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFASESANFS 548
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+S N +L L +
Sbjct: 549 KYNILAQSGSYAMSQANAVQQNVLKLLQ 576
>gi|254455238|ref|ZP_05068671.1| flagellin [Octadecabacter antarcticus 238]
gi|198263487|gb|EDY87761.1| flagellin [Octadecabacter antarcticus 238]
Length = 288
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 79/226 (34%), Gaps = 3/226 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN A+ AS +N ++E +R+S+G R++ A+D+AA +IA + S+ +
Sbjct: 10 LSIATNTGALMASAAASSVNKDMETSMERLSTGKRINSASDDAAGVAIASRLTSEIRGTN 69
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G + +D A+ S+ +++ ++ D ++Q E L +
Sbjct: 70 QAIRNAQDGQALIDTAEGSHSEVENILQRMRELAVQAASDTNDTADRTNLQVEFDALLEE 129
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ I+ +++ G+ L GS+ A + G+ D +
Sbjct: 130 VDRISAVTTWAGQTLLDGSGGSAGAFTFQIGAGTSSSDTLTVTIKSLGSSGSVVTAGSSL 189
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
S + + S + +
Sbjct: 190 SLASNGSAATAITAIDTSIANLNAQRAELGSASNRLDNTVANLTNV 235
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 48/97 (49%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ ++ IDT I A ++GS S+R+ + + +E G GR+ DAD
Sbjct: 192 ASNGSAATAITAIDTSIANLNAQRAELGSASNRLDNTVANLTNVAINLEGGRGRIEDADF 251
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
ASEST L+ Q QQ + L+ N S +LSL +G
Sbjct: 252 ASESTSLAKSQILQQASTAMLAQANASKQNVLSLLQG 288
>gi|189164128|gb|ABU96045.2| flagellin [Bacillus thuringiensis serovar novosibirsk]
Length = 381
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 42/256 (16%), Positives = 92/256 (35%), Gaps = 3/256 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 8 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARENGLGVA 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + ++ +++ +++ G + K++ E + L+ Q+
Sbjct: 68 ANNTQDGMSLIRTADSALNSVSNILLRMRDIANQSANGTNTGDNQKALDKEFSALKEQID 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L D S + S + + T+ +
Sbjct: 128 YISKNTEFNDKKLLNGDNKSIAIQTLDNADTSKQINIDLANTSTSSLKIDKLSIEGKGNQ 187
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + + + K ++ A ++T + K +
Sbjct: 188 TIAITAADIAKDTNIAALTSAQGKLAALTGTPAPAALTTAVDEFKAAFEKVDKNLMSDTQ 247
Query: 241 QAKGIATIPVPLPAAP 256
I A
Sbjct: 248 ITGIENAIKAYDGATT 263
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 48/139 (34%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ + + + + + V T D E + ID +
Sbjct: 243 MSDTQITGIENAIKAYDGATTKTLALAQAVGTAYTAPTPGDITKELPNASSSIKSIDAAL 302
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ + +G+ +R+ + +K ++ ++ DADMA E + ++ + +
Sbjct: 303 ETIASNRATLGATLNRLDFNVNNLKSQASSMASAASQIEDADMAKEMSEMTKFKILNEAG 362
Query: 433 VQALSIVNNSTARILSLFR 451
+ LS N + + L +
Sbjct: 363 ISMLSQANQTPQMVSKLLQ 381
>gi|14278892|dbj|BAB58982.1| flagellin [Bacillus subtilis]
Length = 249
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 87/247 (35%), Gaps = 4/247 (1%)
Query: 9 SAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
+A++ +L N + +++SSGLR++ A D+AA +I++ M+ L S
Sbjct: 1 AALNTLNRLSSNNSASQKNMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLEMASKNAQ 60
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS----KSIQSEITQLQSQLRDIAR 124
G S + A+ +++ ++ ++ GT +I+ E++ L+ ++ I++
Sbjct: 61 DGISLIQTAEGALTETHAILQRMRELTVQAGNTGTHQPEDLTAIKDEMSALEEEINGISQ 120
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ FNG+ L + + + I G + TT+ +
Sbjct: 121 RTEFNGKKLLNGSVTAGFTFQIGANANQSINVQIGSMDATTLGVNGIDVSDAAFDFNTEI 180
Query: 185 ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKG 244
+ + + + S++ A + + A + K
Sbjct: 181 AKIDTAITTVSSQRSKLGAVQNRLEHTINNLGASSENLTAAESRIRDVDMAKEMSEFTKN 240
Query: 245 IATIPVP 251
Sbjct: 241 NILSQAS 247
Score = 88.3 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 23/169 (13%), Positives = 50/169 (29%)
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL 325
+ +V A T ++ G + T T T
Sbjct: 81 QRMRELTVQAGNTGTHQPEDLTAIKDEMSALEEEINGISQRTEFNGKKLLNGSVTAGFTF 140
Query: 326 DSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
+ + I+ + D + ++ IDT I ++ K+G++
Sbjct: 141 QIGANANQSINVQIGSMDATTLGVNGIDVSDAAFDFNTEIAKIDTAITTVSSQRSKLGAV 200
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+R+ + + + + R+ D DMA E + + Q +
Sbjct: 201 QNRLEHTINNLGASSENLTAAESRIRDVDMAKEMSEFTKNNILSQASQA 249
>gi|222823204|ref|YP_002574777.1| flagellin [Campylobacter lari RM2100]
gi|222538425|gb|ACM63526.1| flagellin [Campylobacter lari RM2100]
Length = 569
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 77/211 (36%), Gaps = 3/211 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVASLNAQANANLNSRALDTSLSRLSSGLRINSAADDASGMAIADSLRSQASTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 65 INNGNDALGILQTADKAMDEQLKILDTIKVKATQAAQDGQSTKTRNMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + I S + ++ S
Sbjct: 125 NIANTTAFNGKQLLSGGFTNQEFQIGAQSNQSIKATIGATQSSKIGVTRFETGSMSNTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ + + +
Sbjct: 185 IAQLTIKNYNGIDDFKFQPVVISTSVGTGMG 215
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 49/161 (30%)
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
+ + + G S V +V S + + + NI
Sbjct: 409 MSQGSGYSVGSGKNMSLVYNSTEALAFVTAFSIAFGTGSSANGASQFANFVASANIAAKD 468
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
++ +T I +G++ ++I + I + + ++ +
Sbjct: 469 QQAGVTTLKGAMAVMDIAETAITNLDQIRADLGAVQNQITATLNNISVTQVNIKSAESNI 528
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D D A+ES + Q A+S N ++ L +
Sbjct: 529 RDVDFAAESANFAKFNILAQSGSYAMSQANAVQQNVMRLLQ 569
>gi|113911614|gb|ABI48290.1| Fla2 flagellin [Lachnospiraceae bacterium 14-2]
Length = 368
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 36/244 (14%), Positives = 85/244 (34%), Gaps = 3/244 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N +AM+A+++L +++SSG R++ A D+AA I++ M+S L+
Sbjct: 2 VVQHNLTAMNANRQLGVTTSTQAKSSEKLSSGYRINRAGDDAAGLKISEKMRSQIRGLNK 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
S G S + A+ +++A ++ + G +I E++ L +L
Sbjct: 62 ASSNAQDGVSLIQTAEGALNEAHSILQRMNELAVQGANDTNQNVDRDAINQELSALVEEL 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FN ++ L + + + +
Sbjct: 122 DRISETTQFNKQSLLDGSFTGKNLQVGANQNQKITINIAAMNAAAIGIKPTQVGAMSGYL 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+T+ + + N+ + + +V + + K + N+
Sbjct: 182 TTNEVVKNQKVGTNNSAALRGSIGALAACTVQVGAIYSANSKGVAYYKTQNGTITTNSGD 241
Query: 240 DQAK 243
+
Sbjct: 242 VRTC 245
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 46/142 (32%)
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ + T S + + + V +T + ++ I
Sbjct: 227 YYKTQNGTITTNSGDVRTCAKNLAMCAAQIFKVASKPATTVSTPNVRDYQQATGTITMIQ 286
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
I ++ +G++ +R+ + + + + R+ D DMASE S
Sbjct: 287 NAINNVSSQRSALGALQNRLEHTIANLDNVAENTQAAESRIRDTDMASEMVEYSKNNILA 346
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N S +L L +
Sbjct: 347 QAGQSMLAQANQSNQGVLQLLQ 368
>gi|5107843|gb|AAD28521.2|AF128950_1 flagellin [Escherichia coli]
Length = 560
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/241 (16%), Positives = 72/241 (29%), Gaps = 3/241 (1%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+ L +R+SSGLR++ A D+AA +IA S+ L+ + G S
Sbjct: 1 NINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQ 60
Query: 76 IAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +S+ + + I+ +D SIQ EI ++ ++ + FNG N
Sbjct: 61 TTEGALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVN 120
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
L D A I ++ + + +
Sbjct: 121 VLAKDGSMKIQVGANDGETITIDLKKIDSDTLGLNGFNVNGKGTITNKAATVSDLTSAGA 180
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
LK + + + T G + D +T +
Sbjct: 181 KLNTTTGLYDLKTENTLLTTDAAFDKLGNGDKVTVGGVDYTYNAKSGDFTTTKSTAGTGV 240
Query: 253 P 253
Sbjct: 241 N 241
Score = 86.7 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 72/287 (25%)
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
D + + D + K + + L D +
Sbjct: 274 TKDGTVSFETDSAGNITIGGSQAYVDDAGNLTTNNAGSAAKADMKALLKAASEGSDGASL 333
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ A V + + TS S S
Sbjct: 334 TFNGTEYTIAKATPATTTPVAPLIPGGITYQATVSKDVVLSETKAAAATSSITFNSGVLS 393
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
T + + + TV+ N T + +
Sbjct: 394 KTIGFTAGESSDAAKSYVDDKGGITNVADYTVSYSVNKDNGSVTVAGYASATDTNKDYAP 453
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + V +N T+ + A ++ +D I +G+I +R+ +
Sbjct: 454 AIGTAVNVNSAGKITTETTSAGSATTNPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNL 513
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
+ + R+ DAD A+E + +S Q QQ L+ N
Sbjct: 514 NNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVP 560
>gi|87119665|ref|ZP_01075562.1| flagellin [Marinomonas sp. MED121]
gi|86165141|gb|EAQ66409.1| flagellin [Marinomonas sp. MED121]
Length = 295
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 3/153 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +++ A ++L NL+ +R++SG R++ AAD+AA I+ + S L+
Sbjct: 5 VNTNTTSLYAQRQLSSSGNNLDTSFERLASGKRINSAADDAAGLQISNRLTSQTNGLNQS 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
G S A+ M + +++ ++ D ++Q EI L +++
Sbjct: 65 IRNANDGISLAQTAEGAMDETTNMLQRMRTLAIQSANGSNTDEDRLALQQEIKALTTEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+A ++F G+N L S + +
Sbjct: 125 RVASDTTFGGQNLLDGSYSSGVFQVGADAQQTI 157
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 46/119 (38%)
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
G S + T + + + M+ + + I ++G++ +R
Sbjct: 176 GGFNVQGLSSAAGTTVVTSTTASISSVANAQSMIEMLGSMIAAVDTKRAELGAVQNRFSS 235
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ +++ VE R+ DAD A E+ L++ Q QQ + LS N LSL
Sbjct: 236 TISNLGNIKENVEGAKSRISDADFAQETATLTSNQILQQASTTILSQANQRPQTALSLL 294
>gi|294013072|ref|YP_003546532.1| flagellin [Sphingobium japonicum UT26S]
gi|292676402|dbj|BAI97920.1| flagellin [Sphingobium japonicum UT26S]
Length = 277
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN SA+ A+ N L +R+S+G R++ A D+AA +IA M S +
Sbjct: 1 MTVIGTNSSALRATNASAMANKALGTAMERLSTGKRINSAKDDAAGLAIASTMTSQIRGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQS 117
+ G S A+ + + +++ ++ G+ D +I++EI QL
Sbjct: 61 TQGIRNANDGISLAQTAEGALGEVGNMLQRMRELTVQGLNGTNDVKSQGNIKNEIDQLAK 120
Query: 118 QLRDIARGSSFNGENWLRTDL 138
Q+ + + FNG+
Sbjct: 121 QIDSVLSKTEFNGKMLFSAAA 141
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 27/264 (10%), Positives = 65/264 (24%)
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+ + + +++ + +T + + GI+
Sbjct: 13 ATNASAMANKALGTAMERLSTGKRINSAKDDAAGLAIASTMTSQIRGMTQGIRNANDGIS 72
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
A N + + GN + K + +
Sbjct: 73 LAQTAEGALGEVGNMLQRMRELTVQGLNGTNDVKSQGNIKNEIDQLAKQIDSVLSKTEFN 132
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ + T + ++
Sbjct: 133 GKMLFSAAAPATIDIQAGAGGTDTVSIALGQLDLSAVATATGGTLSGTVAAPAFAAADLA 192
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
DT ++ +G+ +R+ + + + R+ DAD ++E+T L+ Q
Sbjct: 193 VYDTALETVATKRADLGAAQNRLESTVNNLTANVTNLTDARSRIEDADFSAETTALAKQQ 252
Query: 427 TQQQLAVQALSIVNNSTARILSLF 450
Q + L+ N S +L L
Sbjct: 253 ILSQASTAMLAQANQSQQGVLKLI 276
>gi|117923389|ref|YP_864006.1| flagellin domain-containing protein [Magnetococcus sp. MC-1]
gi|117607145|gb|ABK42600.1| flagellin domain protein [Magnetococcus sp. MC-1]
Length = 377
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 63/163 (38%), Gaps = 3/163 (1%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+KL+ + L R++SG R++ A+D+AA +++ M + L+ + G S
Sbjct: 121 QRKLKSSSQELGKAYVRLASGYRINGASDDAAGLAVSTRMTAQIRGLNQSARNANDGISL 180
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
V +A+ + + + ++ +D + E++ L S++ I+ ++FNG
Sbjct: 181 VQVAEGALVETEAALQRMRELAVQAVSGTYTDSDRSDLNDEVSALISEITRISTQTTFNG 240
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE 173
+ + + A + ++
Sbjct: 241 AVLMSSTMTFDIQVGADVGQKITVSTAAAGASALGVNTTSITS 283
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 34/91 (37%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
NT + ++ ID I + +G +R+ + + E GR
Sbjct: 276 VNTTSITSVGLASVAITKIDAAIARVSDMRAVLGVQQNRLEAAVHNLSSLCAHTEVARGR 335
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVN 440
++D DMA E+ L+ QQ L+ N
Sbjct: 336 IMDVDMAQETANLTKQSILQQTGAAMLAQAN 366
>gi|15887889|ref|NP_353570.1| flagellin [Agrobacterium tumefaciens str. C58]
gi|1865675|emb|CAA65302.1| flaC [Agrobacterium tumefaciens str. C58]
gi|2459723|gb|AAB71799.1| FlaC [Agrobacterium tumefaciens]
gi|15155479|gb|AAK86355.1| flagellin [Agrobacterium tumefaciens str. C58]
Length = 313
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 86/205 (41%), Positives = 109/205 (53%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AMSA Q LR I+ LE Q RVSSGLRV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNTAAMSALQTLRAISGQLEDTQSRVSSGLRVKSASDNAAYWSIATTMRSDNMAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG++KVD+A + M ++V+ IK+KI A E G D IQ EI QL+ QL
Sbjct: 61 SAVQDALGLGAAKVDVAYSAMESTVEVVKEIKSKIVAATEEGVDKTKIQEEIDQLKKQLE 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+G+SF+GENWL + S G + + VL +
Sbjct: 121 SIAQGASFSGENWLLGTGAKTVVSGFVRDGGGTVSVTKTDYTLIDTTAGTTTANVLFGLT 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ +
Sbjct: 181 GSPATLDTTKGIIGQPGTASGISVW 205
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/94 (50%), Positives = 68/94 (72%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ +++ ++T + ++A+ +GSI RI LQEDF+ + D+++KG+GRLVDADM
Sbjct: 219 TYTIGNLLTDVETAFQSISSASAALGSIKMRIGLQEDFVSKLTDSIDKGIGRLVDADMNE 278
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
EST+L ALQTQQQL +Q+LSI N S+ ILSLFR
Sbjct: 279 ESTKLKALQTQQQLGIQSLSIANTSSENILSLFR 312
>gi|114054811|gb|ABI50006.1| FlaA [Clostridium botulinum]
Length = 269
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+ +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 1 IXHNLNAMNXHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 61 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I+ + FN ++ + + + ++
Sbjct: 121 RISSQTQFNTKSLINGAVSKTADAMT 146
Score = 77.1 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 36/110 (32%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
++ T + + I + + N + + + ++ ID I +
Sbjct: 141 TADAMTFQIGANSGQTIKLTIGSMDAKTLKVDNIKLDDTAANVTKQIATIDNAINSVSKE 200
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
K+G+ +R+ + + ++ R+ D DMA E
Sbjct: 201 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFXKTNIL 250
>gi|15214031|sp|Q9KWX0|FLAB2_TREMA RecName: Full=Flagellar filament 31.3 kDa core protein; AltName:
Full=Flagellin subunit protein B2
gi|6723981|emb|CAB67249.1| flagellin subunit protein B2 [Treponema maltophilum]
Length = 286
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 78/200 (39%), Gaps = 3/200 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM +++ L N +++SSG++++ A D+A+ ++++ M+S L+
Sbjct: 3 INHNMSAMYSNRVLGVTNLAQAKDMEKLSSGMKINRAGDDASGLAVSEKMRSQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S G S + +++ + + D+M I+ D IQ E++QL +++
Sbjct: 63 SRNAQNGISFIQVSEGYLQETTDIMHRIRELAVQSSNGIYSDEDRMQIQVEVSQLVAEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG N L +T + N ++ + V +
Sbjct: 123 RIASHAQFNGMNMLTGRFARATGENTVTGSMWLHIGANMDQRMQVFIGTMTAMAVGVREI 182
Query: 181 TDGTERYGLLDRNHKIKVEP 200
+ +
Sbjct: 183 GSEKVMSIAAPDDANRAIGT 202
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 36/99 (36%)
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
+ + ID +K +G+ +R+ + + + + + + D
Sbjct: 188 MSIAAPDDANRAIGTIDEGLKKINKQRADLGAYQNRLEMTVKGLDVAAENTQAAESTIRD 247
Query: 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DMA + + + Q L+ N +T +L+L +
Sbjct: 248 TDMAKQMVDFTKNRILAQAGTAMLAQANVTTQNVLTLLQ 286
>gi|302037655|ref|YP_003797977.1| flagellin [Candidatus Nitrospira defluvii]
gi|300605719|emb|CBK42052.1| Flagellin, class B [Candidatus Nitrospira defluvii]
Length = 275
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 78/226 (34%), Gaps = 3/226 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ TN S+++A + L L +R+SSGLR++ AAD+AA +++ +++ +++
Sbjct: 3 LVVNTNVSSLAAQRNLSINQAQLGRSVERLSSGLRITRAADDAAGLGVSETLRAQIRSIN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQ 118
+ G G S +A + ++S ++ T T+ + E L+S+
Sbjct: 63 QANRNAGDGISLTQVADGAAATVGSLLSRMRELATQSASGTLGATERSYLDQEFVALRSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + +NG+ L + I +
Sbjct: 123 IDRIATTTEYNGQPLLSGSSNTFEVFIGFKSGSGNSLNVALADLDVAAVGLTGASVSTAA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
++ V + T++ + F
Sbjct: 183 AAQTMLSNIDSAISAVATARANYGSIQSRFEVAIQNLTVTAENFTA 228
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 44/98 (44%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ A + M+S ID+ I A GSI SR + + + + R+ DAD
Sbjct: 178 VSTAAAAQTMLSNIDSAISAVATARANYGSIQSRFEVAIQNLTVTAENFTAAESRIRDAD 237
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+A E++ + Q Q + L+ N+ + L+L RG
Sbjct: 238 IAQETSVFTKNQILTQSGIAILAQANSLPQQALALLRG 275
>gi|239996706|ref|ZP_04717230.1| flagellin-like protein [Alteromonas macleodii ATCC 27126]
Length = 272
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 38/256 (14%), Positives = 85/256 (33%), Gaps = 3/256 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN S+++A +++ +++ +L +R+SSG R++ AAD+AA I++ M S L
Sbjct: 5 VNTNVSSLNAQRQVFNVSNSLSTSFERLSSGFRINSAADDAAGLQISERMTSQVQGLDQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
S V A+ + + + I+ D ++ SEIT L++++
Sbjct: 65 VRNANDAISVVQTAEGALDETTTALQRIRTLAIQAQNGVNTAEDRAALSSEITALKAEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + F G+N L + A + + + T +
Sbjct: 125 RVADTTQFAGKNLLDGTFAADFLVGANAGQSVNVTIGSDYDSTTLTVTGTVDSDANAGTL 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + ++ + + + +
Sbjct: 185 LGQVDAALSTIGTQRADLGALQNRFQSTIRNLSNISENVSAARSRIQDTDFATETANLTR 244
Query: 241 QAKGIATIPVPLPAAP 256
L A
Sbjct: 245 NQIMQQASTTVLAQAN 260
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 37/98 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ +D + +G++ +R + + + V R+ D D
Sbjct: 175 VDSDANAGTLLGQVDAALSTIGTQRADLGALQNRFQSTIRNLSNISENVSAARSRIQDTD 234
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
A+E+ L+ Q QQ + L+ N LSL G
Sbjct: 235 FATETANLTRNQIMQQASTTVLAQANQRPQAALSLLGG 272
>gi|3290044|gb|AAC25647.1| flagellin A [Campylobacter jejuni]
Length = 575
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 79/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANSDLNSKALDQSLARLSSGLRINSAADDASGMAIADSLRSQASTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + +S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKTTIGATQSSKIGLTRFETGGRISESG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + +
Sbjct: 185 EVQFTLKNYNGIDDFKFQKVVISTSVGT 212
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 38/97 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ ++I + I + + V+ ++ D D
Sbjct: 479 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQITSTINNITVTQVNVKSAESQIRDVD 538
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A++ N+S +L L +
Sbjct: 539 FAAESANYSKANILAQSGSYAMAQANSSQQNVLRLLQ 575
>gi|54261989|emb|CAD65852.1| Flagellin C [Escherichia coli]
gi|54261992|emb|CAD65854.1| Flagellin C [Escherichia coli]
gi|54261995|emb|CAD65856.1| Flagellin C [Escherichia coli]
gi|54261998|emb|CAD65858.1| Flagellin C [Escherichia coli]
gi|54262001|emb|CAD65860.1| Flagellin C [Escherichia coli]
gi|54262004|emb|CAD65862.1| Flagellin C [Escherichia coli]
gi|54262007|emb|CAD65864.1| Flagellin C [Escherichia coli]
gi|54262010|emb|CAD65866.1| Flagellin C [Escherichia coli]
Length = 268
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 45/137 (32%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
Y + + S N DA + + ID +
Sbjct: 132 ATYDVSADGKTITETASGNNKVMYLSKSEGGSPILVNEDAAKSLQSTTNPLETIDKALAK 191
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G++ +R + + + R+ DAD A+E + +S Q QQ
Sbjct: 192 VDNLRSDLGAVQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTS 251
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +T +LSL R
Sbjct: 252 VLAQANQTTQNVLSLLR 268
>gi|5107849|gb|AAD28524.2|AF128953_1 flagellin [Escherichia coli]
Length = 556
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/241 (16%), Positives = 72/241 (29%), Gaps = 3/241 (1%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+ L +R+SSGLR++ A D+AA +IA S+ L+ + G S
Sbjct: 1 NINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQ 60
Query: 76 IAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +S+ + + I+ +D SIQ EI ++ ++ + FNG N
Sbjct: 61 TTEGALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVN 120
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
L D A I ++ + + +
Sbjct: 121 VLAKDGSMKIQVGANDGETITIDLKKIDSDTLGLNGFNVNGKGTITNKAATVSDLTSAGA 180
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
LK + + + T G + D +T +
Sbjct: 181 KLNTTTGLYDLKTENTLLTTDAAFDKLGNGDKVTVGGVDYTYNAKSGDFTTTKSTAGTGV 240
Query: 253 P 253
Sbjct: 241 N 241
Score = 80.2 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/283 (12%), Positives = 71/283 (25%)
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
D + + D + K + + L D +
Sbjct: 274 TKDGTVSFETDSAGNITIGGSQAYVDDAGNLTTNNAGSAAKADMKALLKAASEGSDGASL 333
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ A V + + TS S S
Sbjct: 334 TFNGTEYTIAKATPATTTPVAPLIPGGITYQATVSKDVVLSETKAAAATSSITFNSGVLS 393
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
T + + + TV+ N T + +
Sbjct: 394 KTIGFTAGESSDAAKSYVDDKGGITNVADYTVSYSVNKDNGSVTVAGYASATDTNKDYAP 453
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + V +N T+ + A ++ +D I +G+I +R+ +
Sbjct: 454 AIGTAVNVNSAGKITTETTSAGSATTNPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNL 513
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+ + R+ DAD A+E + +S Q QQ L+
Sbjct: 514 NNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKA 556
>gi|170791525|gb|ACB38404.1| flagellin A [Aeromonas veronii]
Length = 304
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 74/202 (36%), Gaps = 3/202 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + +L+ R++SGLR++ A D+AA IA + S L+
Sbjct: 5 INTNVSSLNAQRNLMNTTKSLDTSYTRLASGLRINSAKDDAAGLQIANRLTSQVNGLNQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E QL +++
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYDQLMTEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A+ ++F G+ L S A + R T+ S+
Sbjct: 125 RVAKDTTFGGKQLLNGGYVGSFQVGADAAQTITFRMTTAFTIAGMASAAKGNATISTSSA 184
Query: 181 TDGTERYGLLDRNHKIKVEPQV 202
+ I
Sbjct: 185 GSKEPFKVTASTSAVIVANMNS 206
Score = 99.4 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 29/304 (9%), Positives = 68/304 (22%)
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + G D +++ ++ ++
Sbjct: 1 MGLYINTNVSSLNAQRNLMNTTKSLDTSYTRLASGLRINSAKDDAAGLQIANRLTSQVNG 60
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + +
Sbjct: 61 LNQGNRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYDQLM 120
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
A T + +
Sbjct: 121 TEIDRVAKDTTFGGKQLLNGGYVGSFQVGADAAQTITFRMTTAFTIAGMASAAKGNATIS 180
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ + + AN ++ + + ++ +D IK + ++G++ +R
Sbjct: 181 TSSAGSKEPFKVTASTSAVIVANMNSIKLASSAQSAMANLDYMIKVVDSKRAELGAVQNR 240
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + V R+ DAD A+E+ L+ QQ A LS N LS
Sbjct: 241 FDSTIRNQANVSENVSAARSRIRDADFATETANLTKQNILQQAASTILSQANQRPQSALS 300
Query: 449 LFRG 452
L +G
Sbjct: 301 LLQG 304
>gi|3290034|gb|AAC25642.1| flagellin B [Campylobacter jejuni]
Length = 572
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/279 (16%), Positives = 90/279 (32%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGPLNAHANSVVNARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGGRISSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ K + ++
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGTGLGALAEEINKSADKTGVRATFTVETRGIAAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + G + S
Sbjct: 245 RAGTTSDTFAINGVTIGQVAYEDGDGNGALVAAINSVKD 283
Score = 93.7 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T IGS+ +++ + + I + + V+ + D D
Sbjct: 476 VTTLKGAMAVMDIAETDTTNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVD 535
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A+S N +L L +
Sbjct: 536 FAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 572
>gi|258622505|ref|ZP_05717527.1| lateral flagellin LafA [Vibrio mimicus VM573]
gi|262173371|ref|ZP_06041048.1| flagellin protein flaA [Vibrio mimicus MB-451]
gi|258585205|gb|EEW09932.1| lateral flagellin LafA [Vibrio mimicus VM573]
gi|261890729|gb|EEY36716.1| flagellin protein flaA [Vibrio mimicus MB-451]
Length = 289
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 61/140 (43%), Gaps = 3/140 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN++++ L L +R+S+G R++ AAD+AA I+ ++S +
Sbjct: 3 LSMHTNYASLVTQNTLGATGNLLNTAMERLSTGYRINSAADDAAGLQISTRLESQTRGMK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQ 118
G S + A+ M + +++ +K+ T D ++ E QL +
Sbjct: 63 VAMRNAQDGISMMQTAEGAMDEMTNIIYRMKDLATQASNGSASKADKAALNKEYQQLNDE 122
Query: 119 LRDIARGSSFNGENWLRTDL 138
L +I ++F G+ +
Sbjct: 123 LVNIKTSTNFGGQKLFDSTG 142
Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 29/79 (36%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ + G+ +R+ + M + GR+ D D A E++ ++ Q Q
Sbjct: 210 LAQIGSVRSSFGANINRLDHTIVNLGNMVENTSAAKGRITDTDFAVETSNMTKNQLLMQA 269
Query: 432 AVQALSIVNNSTARILSLF 450
L+ N +SL
Sbjct: 270 GTSVLTKTNQLPTMAISLL 288
>gi|144191|gb|AAA23020.1| flagellin (flaB) [Campylobacter coli]
Length = 573
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 52/279 (18%), Positives = 95/279 (34%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGGFTNQEFQIGSSSNQTIKASIGATQSSKIGVTRFETGSQSFSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T G + + + + I+ K + +K+ A
Sbjct: 185 TVGLTIKNYNGIEDFKFDSVVISTSVGTGLGALAEEINRNADKTGIRATFDVKSVGAYAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + N G + + S +
Sbjct: 245 KAGNTSQDFAINGVVIGQINYNDGDNNGQLISAINAVKD 283
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 65/206 (31%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
I A G + + + + + G+ + S + +
Sbjct: 368 GQISAANADAMGFNAYNGGGAKQIIFASSIAGFMSQAGSGFSAGSGFSVGSGKNYSAILS 427
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+++ V + T + S ++ ++ H T ++
Sbjct: 428 ASIQIVSSAASISSTYVVSTGSGFSAGSGNSQFAALRISTVSAHDETAGVTTLKGAMAVM 487
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+T I + IG++ +++ + + I + + V+ + D D A+ES S
Sbjct: 488 DIAETAITNSDQIRADIGAVQNQLQVTINNITVTQVNVKAAESTIRDVDFAAESANFSKY 547
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q A+S N +L L +
Sbjct: 548 NILAQSGSYAMSQRNAVQQNVLKLLQ 573
>gi|258624672|ref|ZP_05719607.1| lateral flagellin LafA [Vibrio mimicus VM603]
gi|258583064|gb|EEW07878.1| lateral flagellin LafA [Vibrio mimicus VM603]
Length = 289
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 3/140 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN++++ L L +R+S+G R++ AAD+AA I+ ++S +
Sbjct: 3 LSMHTNYASLVTQNTLGATGNLLNTAMERLSTGYRINSAADDAAGLQISTRLESQTRGMK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQ 118
G S + A+ M + +++ +K+ T D ++ E QL +
Sbjct: 63 VAMRNAQDGISMMQTAEGAMDEMTNIIYRMKDLATQASNGSASKADKAALNKEYQQLNDE 122
Query: 119 LRDIARGSSFNGENWLRTDL 138
L +I ++F G+ T
Sbjct: 123 LVNIKTSTNFGGQKLFDTTG 142
Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 29/79 (36%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ + G+ +R+ + M + GR+ D D A E++ ++ Q Q
Sbjct: 210 LAQIGSVRSSFGANINRLDHTIVNLGNMVENTSAAKGRITDTDFAVETSNMTKNQLLMQA 269
Query: 432 AVQALSIVNNSTARILSLF 450
L+ N +SL
Sbjct: 270 GTSVLTKTNQLPTMAISLL 288
>gi|315927049|gb|EFV06402.1| flagellin A [Campylobacter jejuni subsp. jejuni DFVF1099]
Length = 320
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 79/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + +
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGT 212
>gi|303240166|ref|ZP_07326686.1| flagellin domain protein [Acetivibrio cellulolyticus CD2]
gi|302592257|gb|EFL61985.1| flagellin domain protein [Acetivibrio cellulolyticus CD2]
Length = 272
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 38/256 (14%), Positives = 81/256 (31%), Gaps = 3/256 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A +A ++L+ + E +++SSG R++ A D+AA SI++ M+ L
Sbjct: 3 INNNMMAYNAHRQLKTNSAAQEKSLEKLSSGYRINRAGDDAAGLSISEKMRGQIRGLQQS 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ D +I++E+ L S++
Sbjct: 63 SRNAQDGISLIQTAEGALAETHSILQRMRELSVQASNDTNVANDRTAIKTELDDLISEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN +N L + T I + +
Sbjct: 123 RIASKTQFNTQNLLSGGFENKTIQIGANASEVLTFSIAAMATSALTVSTGAISVGTTADA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ K + + + + + + + + A
Sbjct: 183 QASISLINSAINVVSDQRAKLGAKQNRLEHTINNLDTAAENLQASESRIRDVDMAQEMMS 242
Query: 241 QAKGIATIPVPLPAAP 256
K
Sbjct: 243 YTKNNILNQAATAMLA 258
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 67/239 (28%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ + S ++ + A A T
Sbjct: 34 YRINRAGDDAAGLSISEKMRGQIRGLQQSSRNAQDGISLIQTAEGALAETHSILQRMREL 93
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
++ + N ++ + I+ + T N T
Sbjct: 94 SVQASNDTNVANDRTAIKTELDDLISEIDRIASKTQFNTQNLLSGGFENKTIQIGANASE 153
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
S +M T +T + + +S I++ I + K+G+ +R+
Sbjct: 154 VLTFSIAAMATSALTVSTGAISVGTTADAQASISLINSAINVVSDQRAKLGAKQNRLEHT 213
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + ++ R+ D DMA E + Q A L+ N + +L L +
Sbjct: 214 INNLDTAAENLQASESRIRDVDMAQEMMSYTKNNILNQAATAMLAQANQAPQGVLQLLQ 272
>gi|3290042|gb|AAC25646.1| flagellin B [Campylobacter jejuni]
Length = 572
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 45/279 (16%), Positives = 91/279 (32%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++ L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGSLNSHANSVVNARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGGRISSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ K + ++
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGTGLGALAEEINKSADKTGVRATFTVETRGIAAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + G + S
Sbjct: 245 RAGTTSDTFAINGVTIGQVAYEDGDGNGALVAAINSVKD 283
Score = 96.3 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T IGS+ +++ + + I + + V+ + D D
Sbjct: 476 VTTLKGAMAVMDIAETATTNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVD 535
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A+S N +L L +
Sbjct: 536 FAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 572
>gi|260772282|ref|ZP_05881198.1| flagellin protein FlaC [Vibrio metschnikovii CIP 69.14]
gi|260611421|gb|EEX36624.1| flagellin protein FlaC [Vibrio metschnikovii CIP 69.14]
Length = 351
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 67/202 (33%), Gaps = 3/202 (1%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
+R+SSG R++ A D+AA I+ + + + L G S A+ M+++ +
Sbjct: 1 MERLSSGNRINSAKDDAAGLQISNRLIAQSRGLDVAMRNANDGISIAQTAEGAMNESTSI 60
Query: 88 MSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ +++ + +++ E LQ +L IA +SF G L G ++
Sbjct: 61 LQRMRDLALQSANGTNSDAERQALNEESVALQDELNRIAETTSFGGRRLLNGSFGEASFQ 120
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
I S + I + G + + K + Q +
Sbjct: 121 IGSSSGEAIIMGLTSIRADDYRMGGQSFIATEGKNKDWGVDPTANDLKLEFTKKDGQEVT 180
Query: 205 DIDVSVYDASGTISTKKFKLAT 226
++ T
Sbjct: 181 LDILAKTGDDIEELATYINGQT 202
Score = 113 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 41/95 (43%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ V +D +K + +G+ +R++ + + +++ VE R+ D D A
Sbjct: 257 TVGGSQNAVGILDAALKYIDSQRADLGAKQNRLNHSINNLANIQENVEASKSRIKDTDFA 316
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+T+L+ Q QQ L+ +SL +
Sbjct: 317 KETTQLTKSQILQQAGTSILAQAKQLPNSAISLLQ 351
>gi|74273843|gb|ABA01570.1| FlaB [Aeromonas hydrophila]
Length = 301
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 75/200 (37%), Gaps = 3/200 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + N +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNTSSLNAQRNLMNTNKSLDTSYTRLASGLRINTAKDDAAGLQISNRLTSQVNGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E QL +++
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEFDQLTTEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ +SF G+ L + S A + + + TV +S
Sbjct: 125 RISSDTSFGGQKLLDGNYKGSFQVGADAGQTITFKMTSAFTISGIASSTKGSATVATSAS 184
Query: 181 TDGTERYGLLDRNHKIKVEP 200
+ V
Sbjct: 185 GEPYTVTKGTTAVTSTSVSS 204
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/236 (11%), Positives = 64/236 (27%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ +A T+ + + + + +A + +
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEFDQLTTEIN 124
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++ G + + T ST +
Sbjct: 125 RISSDTSFGGQKLLDGNYKGSFQVGADAGQTITFKMTSAFTISGIASSTKGSATVATSAS 184
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + ++ +D IK + ++G++ +R
Sbjct: 185 GEPYTVTKGTTAVTSTSVSSIKAASSAQLAMANLDFMIKAVDSKRAELGAVQNRFDSTIR 244
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + R+ DAD A+E+ L+ QQ A L+ N LSL
Sbjct: 245 NQSNVSENLSAARSRIRDADFATETANLTKQNILQQAASSILAQANQRPQSALSLL 300
>gi|307701390|ref|ZP_07638410.1| putative flagellin protein [Mobiluncus mulieris FB024-16]
gi|307613405|gb|EFN92654.1| putative flagellin protein [Mobiluncus mulieris FB024-16]
Length = 491
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 41/370 (11%), Positives = 103/370 (27%), Gaps = 8/370 (2%)
Query: 24 LEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSK 83
L +++SSG R++ AAD+ A +I++ +++ G G S V A+ +++
Sbjct: 10 LAKSLEKLSSGFRINRAADDTAGLAISEGLRTQVGGNRQAVRNAQDGISLVQTAEGALNE 69
Query: 84 AIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL-- 138
++ ++ +I +E+ QL+ +L I ++FNG L
Sbjct: 70 VHSILQRMRVLAVQGATDSNSPEARNNIDTELNQLRDELERIGNVTNFNGTQLLDGSASG 129
Query: 139 -GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
G+ + + + + K T E + ++ T G I+
Sbjct: 130 PGALKFQVGANGDQNNRITVDLKDADVTKISQFRQEQEVSNARAAQTAELGQKKYLLNIE 189
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ + + + + L + + + + A+
Sbjct: 190 GKTITIDLSAKANPTDADVTDALQKGLQEANFEGYIRGGSAETAEFDMTNVDANDKASAG 249
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
T K + A + + + +
Sbjct: 250 TYTLTINNKEYKYEAKAGATGADLHAIVEGLNEDLKRKGADYKLVEDTTGKKIKLVAGES 309
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
V + + + + + + + D +
Sbjct: 310 VKNTQVDFALTTTATGDAKAAAEAMKGKVGFASGKGFEFAVKDKKITFARADGKNMDVDL 369
Query: 378 AAG--KIGSI 385
A ++G+
Sbjct: 370 AHSLTELGAT 379
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 38/113 (33%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T D + + L N+ + + ++ +D +I+
Sbjct: 379 TPGTDDKHLKLDAFSEYKDGVASVDANGAKLTTKSQVNSLTVKDHDTAQNLIRVLDQKIQ 438
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+ A +G++ +R + + + + R+ D DMA E + + Q
Sbjct: 439 SVSTARSNLGAVQNRFEHTITNLNVAVENLAASESRVRDTDMAQEMMQFTRNQ 491
>gi|160896066|ref|YP_001561648.1| flagellin domain-containing protein [Delftia acidovorans SPH-1]
gi|160361650|gb|ABX33263.1| flagellin domain protein [Delftia acidovorans SPH-1]
Length = 283
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 48/252 (19%), Positives = 86/252 (34%), Gaps = 3/252 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN +++A + L +L R+SSGLRV+ A D+AA +IA+ M + ++
Sbjct: 4 SINTNVQSLNAQRNLSTSQSSLSTTMQRLSSGLRVNSAKDDAAGLAIAERMNAQVRGMNV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ +SK D + ++ D S+ E +L ++
Sbjct: 64 AVRNANDGVSMAQTAEGALSKVTDALQRMRELAVQARNGTNGAKDQVSLNKEFVELGKEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ +G+ FNG+ L TD G+ + + + T D +
Sbjct: 124 DRVIKGADFNGKKILSTDSGAINFQVGANTSANDSITVTTSDLGTNADITGITSASIGSD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+T + L + + + L S A +
Sbjct: 184 ATTALDATALATVISNLDTALDTVNSERAVLGATQNRFEAVVSNLQVASENTASARSRIM 243
Query: 240 DQAKGIATIPVP 251
D T +
Sbjct: 244 DADFASETANLS 255
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 49/138 (35%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
S + + + ++ + A+ ++S +DT +
Sbjct: 146 NFQVGANTSANDSITVTTSDLGTNADITGITSASIGSDATTALDATALATVISNLDTALD 205
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R +++ + R++DAD ASE+ LS Q QQ
Sbjct: 206 TVNSERAVLGATQNRFEAVVSNLQVASENTASARSRIMDADFASETANLSRSQILQQAGT 265
Query: 434 QALSIVNNSTARILSLFR 451
++ N +L+L R
Sbjct: 266 AMVAQANQLPQGVLALLR 283
>gi|88813661|ref|ZP_01128890.1| Flagellin-like protein [Nitrococcus mobilis Nb-231]
gi|88789079|gb|EAR20217.1| Flagellin-like protein [Nitrococcus mobilis Nb-231]
Length = 400
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/438 (11%), Positives = 109/438 (24%), Gaps = 53/438 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN L D L VQ +++SG R+ AD+ + + + I+ GA+ +
Sbjct: 3 ISTNQIQQLGLNALLDQQSRLTKVQQQIASGRRILTPADDPSGAARSLILAHSIGAIESY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S + ++ + + + + +++ ++ + I +E+ Q QL
Sbjct: 63 SRSADQIKPRMQLEDSTLEQTQNLIQRLRELAVQANNATQTADNRHQIGAEVRQTFIQLV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + NGE + + ++ D ++ T L D
Sbjct: 123 QLANSTDGNGEYLFAGLQSRTQPFLRAGNTVTYQGDQGQRLAQTGSHQQLATTHSGYDVF 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + T S+ L +
Sbjct: 183 MKIRTGDGQFTAEAASINTGSGIISPVTVTDPGALTGSSYAVTFDINGAGALTYTLSKDG 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
P + T
Sbjct: 243 TPTATQPYDSSTPIRFDGLSVTLD------------------------------------ 266
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ T+ L + T +
Sbjct: 267 --------------GTPAKGDQFTIQPSGFGSLFDTVDRFATALETAQDGPTGRTAYQNV 312
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + +D + ++GS + + ++ + + L D D A T
Sbjct: 313 GNQTLQGLDQALDHILTIRAEVGSRLNALDSSQEANEAALLNFQTTKSALDDLDYAKAIT 372
Query: 421 RLSALQTQQQLAVQALSI 438
LS Q A ++ +
Sbjct: 373 ELSQRLLGLQAAQKSYAQ 390
>gi|182418398|ref|ZP_02949692.1| flagellin [Clostridium butyricum 5521]
gi|237666651|ref|ZP_04526636.1| flagellin [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182377780|gb|EDT75324.1| flagellin [Clostridium butyricum 5521]
gi|237657850|gb|EEP55405.1| flagellin [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 276
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N S++++ +L+ N + + +++SG R++ AAD+AA I++ M++ L+
Sbjct: 3 IKNNISSLASCDQLKKNNKDNISAKMKLTSGYRINYAADDAAGLCISEKMRTQIKGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S G S ++ + +++ + T D K + E+ QL+ ++
Sbjct: 63 STNTQDGYSMFQTIESSTEEVHNILQRMSILSTQSVTETNTNDDRKLVDKEVQQLKEEID 122
Query: 121 DIARGSSFNGENWLRTDLG 139
IA+ + FNG+ L G
Sbjct: 123 RIAKDTEFNGKKVLDGTYG 141
Score = 86.7 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 13/105 (12%), Positives = 35/105 (33%)
Query: 345 NITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVE 404
+ + K ++ + + I ++ ++G+ +R+ + + +
Sbjct: 169 CNSLGIGDLRVDTKEDSQKALKALSKAIDEISSRRVEMGATGNRLTHAVKSLDNNSENMS 228
Query: 405 KGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
R+ D D+A E+ L+ N+ +L L
Sbjct: 229 ASESRIRDTDIAKEAMENVKSNILINSTQSVLAQSNHEPEYVLKL 273
>gi|190133802|gb|ACE62914.1| flagellin A [Campylobacter jejuni]
Length = 572
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 95/279 (34%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ K + ++
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGTGLGALADEINKNADKTGVRATFTVETRGMAAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + G + + S
Sbjct: 245 RAGTTSDDFAINGVKIGQVEYKDGDANGALVAAINSVKD 283
Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T IGS+ +++ + + I + + V+ + D D
Sbjct: 476 VTTLKGAMAVMDIAETATTNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVD 535
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ASES S Q A+S N +L L +
Sbjct: 536 FASESANFSKYNILAQSGSYAMSQANAVQQNVLRLLQ 572
>gi|50898330|gb|AAT86134.1| flagellin filament C [endosymbiont of Vestimentiferan tubeworm]
Length = 274
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 40/250 (16%), Positives = 80/250 (32%), Gaps = 1/250 (0%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N +++A + L +L R+SSGLRV+ A D+AA + M +D L+ +
Sbjct: 1 NVMSLNAQRNLSSTQNDLAKSLQRLSSGLRVNSAKDDAAGLYQIEKMTADIRGLNQATRN 60
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG-TDSKSIQSEITQLQSQLRDIARG 125
G S A+ + + + + I+ D +Q E+ QL ++ I +
Sbjct: 61 AADGISLGQTAEGALGQIANNLQRIREIAVQSSNATVEDRTGLQKEVDQLTQEISRIVQT 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+ FNG + L S + + T ++ S+
Sbjct: 121 TEFNGTSLLSATASMSFQVGQDGKASHQVSVKTVDLTSLNAYASSLTATGTINVSSASAA 180
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
L + I+ + + + L+ + + + D
Sbjct: 181 SAELSTASTGIENDITSVAQNRATFGAVQNRFEAVISNLSNYAENLTASRSRIQDADFAA 240
Query: 246 ATIPVPLPAA 255
T +
Sbjct: 241 ETATLTKTQI 250
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 34/86 (39%)
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ I+ I G++ +R + + + R+ DAD A+E+ L+
Sbjct: 189 TGIENDITSVAQNRATFGAVQNRFEAVISNLSNYAENLTASRSRIQDADFAAETATLTKT 248
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ V LS N L+L +
Sbjct: 249 QILQQAGVSILSQANVVPQSALALLQ 274
>gi|9843793|emb|CAC03721.1| flagellin [Pseudomonas fluorescens]
Length = 427
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 57/427 (13%), Positives = 126/427 (29%), Gaps = 29/427 (6%)
Query: 46 YWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RG 102
IA + S L GSS A+ M ++ +++ +++
Sbjct: 1 GLQIANRLTSQINGLGVAIKNANDGSSIAQTAEGAMQQSTNILQSMRTLALQSANGSPSA 60
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
D KS Q++ L ++L IA ++F G+N L G+++ + + +
Sbjct: 61 EDRKSNQAQYAALTAELTRIATTTTFGGKNLLDGSFGTTSFQVGANANQTIDMSIGNVAA 120
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
L +++ ++ + V +G +
Sbjct: 121 NNIGSQQLKTQSLTPSATGIAGGAITVTGGGQSATVTLAAGASAKQIAAQMNGAVGGLAA 180
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAA--------------------------P 256
+T + + AA A
Sbjct: 181 TASTEAQFTVNAATIGAATPPNANFTLQVGSGAAVQFTGVTKTSDLADQLKSNAAKLGIS 240
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
++++ KS + G + AT + T + A +
Sbjct: 241 VNYDSSTNALSVKSDTGENLTFNAGDGGAAGISVATKDGTGTYGTATALAATAIIATGAV 300
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
+++ S+ + + +G + + N + + I I
Sbjct: 301 SLNSSSSYALNGAGVAGVFAAGAATAANSTKTTVNNTDVTTAANAQNAIDVITQAISDID 360
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
+ +G++ +R ++ + D G++ D D A+E+ +L+ QT QQ + L
Sbjct: 361 SQRAGLGAVQNRFDNTVANLQSIADNSSAARGQIQDVDYAAETAQLTKQQTLQQASTAIL 420
Query: 437 SIVNNST 443
S N
Sbjct: 421 SQANQLP 427
>gi|170791553|gb|ACB38418.1| flagellin A [Aeromonas veronii bv. sobria]
Length = 304
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 73/202 (36%), Gaps = 3/202 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + +L+ R++SGLR++ A D+AA IA + S L+
Sbjct: 5 INTNVSSLNAQRNLMNTTKSLDTSYTRLASGLRINSAKDDAAGLQIANRLTSQVNGLNQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D ++Q E QL +++
Sbjct: 65 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYDQLMTEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A+ ++F G+ L S A + R T+ ++
Sbjct: 125 RVAKDTTFGGKQLLNGGYVGSFQVGADAAQTITFRMTTAFTIAGMASAAKGNATISTSTT 184
Query: 181 TDGTERYGLLDRNHKIKVEPQV 202
+
Sbjct: 185 GSKEPFKVTASTSAVTVANMNS 206
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/304 (9%), Positives = 68/304 (22%)
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + + G D +++ ++ ++
Sbjct: 1 MGLYINTNVSSLNAQRNLMNTTKSLDTSYTRLASGLRINSAKDDAAGLQIANRLTSQVNG 60
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ + +
Sbjct: 61 LNQGNRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEYDQLM 120
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
A T + +
Sbjct: 121 TEIDRVAKDTTFGGKQLLNGGYVGSFQVGADAAQTITFRMTTAFTIAGMASAAKGNATIS 180
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ + + AN ++ + + ++ +D IK + ++G++ +R
Sbjct: 181 TSTTGSKEPFKVTASTSAVTVANMNSIKLASSAQSAMANLDYMIKVVDSKRAELGAVQNR 240
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + V R+ DAD A+E+ L+ QQ A LS N LS
Sbjct: 241 FDSTIRNQANVSENVSAARSRIRDADFATETANLTKQNILQQAASTILSQANQRPQSALS 300
Query: 449 LFRG 452
L +G
Sbjct: 301 LLQG 304
>gi|170791551|gb|ACB38417.1| flagellin A [Aeromonas sobria]
Length = 300
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 76/208 (36%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + + + +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNMMNSSKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQVNGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D +++Q E+ QL +++
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSAKDREALQKEVDQLGAEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ ++F G L G + A + + ++ +
Sbjct: 125 RISTSTTFAGTKLLDGSFGGTFQVGADANQTISFSLSQADGFSISGISAAAGTSITTATG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + +V
Sbjct: 185 ATVLVSAIFVGGSAGGISISSQSNAQNV 212
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 46/122 (37%)
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
+ + + + + A + + + + +++ D + ++G++ +R+
Sbjct: 179 ITTATGATVLVSAIFVGGSAGGISISSQSNAQNVLAAADAMLAIVDGKRAELGAVQNRMD 238
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + V R+ DAD A E+ ++ QQ A LS N L L
Sbjct: 239 STIRNQANISENVSAARSRIRDADFAIETANMTKQNILQQAASSILSQANQRPQSALQLL 298
Query: 451 RG 452
+G
Sbjct: 299 QG 300
>gi|152997572|ref|YP_001342407.1| flagellin domain-containing protein [Marinomonas sp. MWYL1]
gi|150838496|gb|ABR72472.1| flagellin domain protein [Marinomonas sp. MWYL1]
Length = 294
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 47/210 (22%), Positives = 88/210 (41%), Gaps = 3/210 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN S++SA ++L +L+ +R+SSGLR++ A+D+AA I+ + S L+
Sbjct: 5 VNTNTSSLSAQRQLMGSAKSLDTSFERLSSGLRINSASDDAAGLLISNRLTSQVNGLNQS 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
G S A+ + + +++ ++ D +IQ E++QL +++
Sbjct: 65 VRNANDGISLAQTAEGALDETTNMLQRMRTLSIQASNGSNSDKDRAAIQQEVSQLSTEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++F GEN L A S +G V T T+ SS
Sbjct: 125 RIASDTTFGGENLLDGTYTGIFQVGADSNQTISFNLTDGGVNNTIDYAGNGGFTMSGLSS 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
+ T + + + Q + D ++
Sbjct: 185 SSTTAQVSVSTASVSTVANAQSMVDTLDTM 214
Score = 96.3 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 56/167 (33%)
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
SD T + + + D SG S +
Sbjct: 127 ASDTTFGGENLLDGTYTGIFQVGADSNQTISFNLTDGGVNNTIDYAGNGGFTMSGLSSSS 186
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
+T + + + MV +DT I + ++G+I +R + + + V
Sbjct: 187 TTAQVSVSTASVSTVANAQSMVDTLDTMIAAVDSKRSELGAIQNRFGSTISNLSNITENV 246
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R+ DAD A E+ +L++ Q QQ + L+ N LSL
Sbjct: 247 SAARARVRDADFAEETAKLTSSQILQQASSSILAQANQRPQTALSLL 293
>gi|78221663|ref|YP_383410.1| flagellin-like [Geobacter metallireducens GS-15]
gi|78192918|gb|ABB30685.1| Flagellin-like protein [Geobacter metallireducens GS-15]
Length = 314
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 73/164 (44%), Gaps = 3/164 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++A + L +L R+SSGLR++ AAD+AA +I++ MK+ +++
Sbjct: 42 LTVNTNVASLNAQRNLASTQVSLNQSLQRLSSGLRINSAADDAAGLAISEGMKAKIRSMN 101
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G S V A+ +++ +++ ++ T I E QL+S+
Sbjct: 102 QAVRNANDGVSLVQTAEGALNEVSNILGRMRELSTQAATGTLTTAQRSYINGEFQQLRSE 161
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
+ IA ++FNG N L + + + +
Sbjct: 162 ITRIAAATTFNGTNLLSSAKTIKIQIGTGNSSFDKLSIALSSMN 205
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 42/90 (46%)
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ M++ +DT I + +G+I +R+ + +++ + R+ DAD+ASE+
Sbjct: 225 QAMLATLDTAIDKVSKTRAGLGAIQNRLQSTINNLQVAVENTSAAQSRIADADIASETAA 284
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ Q L+ N + LSL R
Sbjct: 285 MTRANILTQAGTSILAQANQAPQTALSLLR 314
>gi|189339474|gb|ABD33729.2| flagellin [Bacillus thuringiensis serovar toumanoffi]
Length = 370
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 74/162 (45%), Gaps = 3/162 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ LS
Sbjct: 8 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLSVA 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
++ G + + A + M+ +++ +++ + ++ E +QL+ Q+
Sbjct: 68 ANNTQDGMALIRTADSAMNSVSNILLRMRDIANQSANETNTDANKIALNKEFSQLKEQIT 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
IA + FN ++ L+ D ++ I + V
Sbjct: 128 YIAENTQFNDKDLLKGDNVIKIQTLDSDQASKQIDINLNAVT 169
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 37/89 (41%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
V ID + + +G+ +R+ + +K A+ ++ DADMA E + +
Sbjct: 282 TAVKQIDDALTMVASNRATLGATLNRLDFNVNNLKSQSSAMASAASQIEDADMAKEMSEM 341
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + + LS N + + L +
Sbjct: 342 TKFKILNEAGISMLSQANQTPQMVSKLLQ 370
>gi|119469960|ref|ZP_01612765.1| flagellin [Alteromonadales bacterium TW-7]
gi|119446670|gb|EAW27943.1| flagellin [Alteromonadales bacterium TW-7]
Length = 324
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 71/181 (39%), Gaps = 3/181 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ +N S+++A ++L + L+ R+SSG+R++ A D+AA I+ + S L+
Sbjct: 5 VNSNVSSLNAQRQLSKSSNALDTSFQRLSSGMRINSAKDDAAGMQISNRLSSQVNGLNQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ + + + I+ D +IQ EI L S++
Sbjct: 65 NRNANDGISLAQTAEGALDEVTSMFQRIRTLAQQASNGSNTDEDRLAIQEEIRSLSSEVN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A ++F G+N L + A +V + + + L
Sbjct: 125 RVAEDTTFGGQNLLDGSYDAKFQVGADAVQTIGFSMQDVGTTASGPNSISANGGFTLSGI 184
Query: 181 T 181
Sbjct: 185 A 185
Score = 99.8 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 40/96 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + +++ +D+ I ++G++ +R + + + R+ D D
Sbjct: 228 VSTQGNAQFVLAGMDSMIAVVDKKRAELGAVQNRFQSTIRNQSNISENLSAAKSRIQDTD 287
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A E+ L+ +Q QQ + LS N LSL
Sbjct: 288 FAQETANLTKMQILQQASQTILSQANQRPQAALSLL 323
>gi|77359731|ref|YP_339306.1| flagellin (fliC-like) [Pseudoalteromonas haloplanktis TAC125]
gi|76874642|emb|CAI85863.1| putative flagellin (fliC-like) [Pseudoalteromonas haloplanktis
TAC125]
Length = 277
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 76/203 (37%), Gaps = 3/203 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN S+++A + L L +R++SG+R++ A D+AA I+ + S L
Sbjct: 4 TVNTNVSSLNAQRNLARSGEGLATSMERLASGMRINSAKDDAAGLQISNRLTSQINGLGV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ M ++ +++ ++ D ++Q+E+ LQ +L
Sbjct: 64 AQRNANDGISMAQTAEGAMGESTNILQRMRELALQSANGSNSAVDQDALQTEVAALQLEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA +SF + L G+ +G+ + L V +
Sbjct: 124 TRIAETTSFGDQKLLDATGGAGNDGTFVFQVGANSGETISMSIAAMDSTTLAVNGVDIGD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQV 202
D T +D +
Sbjct: 184 GGDTTAALTSIDAAIATIDAQRA 206
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 45/136 (33%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ T + E S + T N + ++ ID I
Sbjct: 141 TGGAGNDGTFVFQVGANSGETISMSIAAMDSTTLAVNGVDIGDGGDTTAALTSIDAAIAT 200
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
A +G++ +R + +++ V R+ D D A+E+ ++ Q QQ
Sbjct: 201 IDAQRADLGAVQNRFGHTISNLANIQENVSASRSRIQDTDFATETAEMTKNQILQQAGTS 260
Query: 435 ALSIVNNSTARILSLF 450
LS N LSL
Sbjct: 261 ILSQANQLPQAALSLL 276
>gi|292488615|ref|YP_003531499.1| flagellin, filament structural protein FliC [Erwinia amylovora
CFBP1430]
gi|292899775|ref|YP_003539144.1| flagellin (FliC) [Erwinia amylovora ATCC 49946]
gi|291199623|emb|CBJ46742.1| flagellin (FliC) [Erwinia amylovora ATCC 49946]
gi|291554046|emb|CBA21136.1| flagellin, filament structural protein FliC [Erwinia amylovora
CFBP1430]
gi|312172757|emb|CBX81013.1| flagellin, filament structural protein FliC [Erwinia amylovora ATCC
BAA-2158]
Length = 280
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 56/152 (36%), Gaps = 3/152 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSG R++ + ++AA +I+ S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSMERLSSGSRITSSKEDAAGQAISNRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + ++ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALTGINNNLQRVRELTVQAKNGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
++ + FNG L D A
Sbjct: 124 DRVSGQTQFNGVKVLSQDNTMKIQVGANDNET 155
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 39/90 (43%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ ++ +D I +G++ +R+ + + R+ DAD A+E + +
Sbjct: 191 DPLALLDKAISSVDKLRSGLGAVQNRLDSAVTNLNNTTTNLSSAQSRIQDADYATEVSNM 250
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFRG 452
S Q QQ L+ N ++LSL +G
Sbjct: 251 SKAQIIQQAGNSVLAKANQVPQQVLSLLQG 280
>gi|114054813|gb|ABI50007.1| FlaA [Clostridium botulinum]
Length = 245
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 67/172 (38%), Gaps = 3/172 (1%)
Query: 26 VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAI 85
+++SSGLR++ A D+AA +I++ M+ L+ S S + + +++
Sbjct: 5 KSIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQASRNSQDAISLIQTGEGALNETH 64
Query: 86 DVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSST 142
++ ++ D ++Q E+ +LQS++ IA + FN +N L S
Sbjct: 65 SILQRMRELAVQSANDTNVTVDRSNLQKEVAELQSEINRIASQTQFNTKNLLTGSAKSMV 124
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
I + T ++ + + +S G + N
Sbjct: 125 FQIGANKDQVIKLTIGAMDTSTLKVKSINIGSGVKAASISGMIKTIDEAINT 176
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 26/65 (40%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
M+ ID I +A K+G+ +R+ + + ++ R+ D DMA E +
Sbjct: 166 MIKTIDEAINTVSAERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFT 225
Query: 424 ALQTQ 428
Sbjct: 226 KTNIL 230
>gi|57505230|ref|ZP_00371159.1| flagellin (fla1) [Campylobacter upsaliensis RM3195]
gi|57016366|gb|EAL53151.1| flagellin (fla1) [Campylobacter upsaliensis RM3195]
Length = 612
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 3/190 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANSDLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQASTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I S + + ++ SS
Sbjct: 125 NIANTTSFNGKQLLSGGFINQEFQIGSSSNQTIKATIGASQSSKIGLTRFETGAQIIKSS 184
Query: 181 TDGTERYGLL 190
Sbjct: 185 EVEMVIKNYN 194
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 36/97 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ ++I + I + + V+ + D D
Sbjct: 516 VTTLKGAMAVMDVAETAIINLDQIRADIGSVQNQISATINNITVTQVNVKAAESNIRDVD 575
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ASES S Q A++ N S +L L +
Sbjct: 576 FASESANYSKANILAQSGAYAMAQANASQQNVLRLLQ 612
>gi|50898308|gb|AAT86123.1| flagellin filament C [endosymbiont of Vestimentiferan tubeworm]
gi|50898310|gb|AAT86124.1| flagellin filament C [endosymbiont of Vestimentiferan tubeworm]
gi|50898312|gb|AAT86125.1| flagellin filament C [endosymbiont of Vestimentiferan tubeworm]
gi|50898314|gb|AAT86126.1| flagellin filament C [endosymbiont of Vestimentiferan tubeworm]
gi|50898316|gb|AAT86127.1| flagellin filament C [endosymbiont of Vestimentiferan tubeworm]
gi|50898318|gb|AAT86128.1| flagellin filament C [endosymbiont of Vestimentiferan tubeworm]
gi|50898320|gb|AAT86129.1| flagellin filament C [endosymbiont of Vestimentiferan tubeworm]
gi|50898322|gb|AAT86130.1| flagellin filament C [endosymbiont of Vestimentiferan tubeworm]
gi|50898324|gb|AAT86131.1| flagellin filament C [endosymbiont of Vestimentiferan tubeworm]
gi|50898326|gb|AAT86132.1| flagellin filament C [endosymbiont of Vestimentiferan tubeworm]
gi|50898328|gb|AAT86133.1| flagellin filament C [endosymbiont of Vestimentiferan tubeworm]
Length = 274
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 40/250 (16%), Positives = 80/250 (32%), Gaps = 1/250 (0%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N +++A + L +L R+SSGLRV+ A D+AA + M +D L+ +
Sbjct: 1 NVMSLNAQRNLSSTQNDLAKSLQRLSSGLRVNSAKDDAAGLYQIEKMTADIRGLNQATRN 60
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG-TDSKSIQSEITQLQSQLRDIARG 125
G S A+ + + + + I+ D +Q E+ QL ++ I +
Sbjct: 61 AADGISLGQTAEGALGQIANNLQRIREIAVQSSNATVEDRTGLQKEVDQLTQEISRIVQT 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+ FNG + L S + + T ++ S+
Sbjct: 121 TEFNGTSLLSATASMSFQVGQDGKASHQVSVKTIDLTSLNAYASSLTATGTINVSSASAA 180
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
L + I+ + + + L+ + + + D
Sbjct: 181 SAELSTASTGIENDITSVAQNRATFGAVQNRFEAVISNLSNYAENLTASRSRIQDADFAA 240
Query: 246 ATIPVPLPAA 255
T +
Sbjct: 241 ETAALTKTQI 250
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 61/201 (30%)
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
L + S + T ++ + + T G + +
Sbjct: 74 ALGQIANNLQRIREIAVQSSNATVEDRTGLQKEVDQLTQEISRIVQTTEFNGTSLLSATA 133
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ D +++ S K + + Y+ + A + + I+
Sbjct: 134 SMSFQVGQDGKASHQVSVKTIDLTSLNAYASSLTATGTINVSSASAASAELSTASTGIEN 193
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
I G++ +R + + + R+ DAD A+E+ L+ Q QQ
Sbjct: 194 DITSVAQNRATFGAVQNRFEAVISNLSNYAENLTASRSRIQDADFAAETAALTKTQILQQ 253
Query: 431 LAVQALSIVNNSTARILSLFR 451
V LS N L+L +
Sbjct: 254 AGVSILSQANVVPQSALALLQ 274
>gi|114054858|gb|ABI50029.1| FlaA [Clostridium botulinum]
Length = 275
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+ S
Sbjct: 5 HNLNAMNARRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQASR 64
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDI 122
S + A+ +++ ++ ++ D +++Q E+ +LQS++ I
Sbjct: 65 NSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEINRI 124
Query: 123 ARGSSFNGENWLRTDLGSSTASIA 146
+ + FN ++ + + ++
Sbjct: 125 SSQTQFNTKSLINGAVSXDAXAMT 148
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 45/137 (32%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
D + T + + I + + + + ++ ID I
Sbjct: 139 AVSXDAXAMTFQIGANSGQTIKLTIGSMDAKTLXVDXIKLDDTAANVTKQIATIDNAINS 198
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ K+G+ +R+ + + ++ R+ D DMA E + Q A
Sbjct: 199 VSKERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQA 258
Query: 435 ALSIVNNSTARILSLFR 451
L+ N + +L L R
Sbjct: 259 MLAQANQAPQGVLQLLR 275
>gi|315058812|gb|ADT73141.1| Flagellin [Campylobacter jejuni subsp. jejuni S3]
Length = 573
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 94/279 (33%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + +
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRITSGG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ K + ++
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGTGLGALADEINKNADKTGVRATFTVETRGMAAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + + T G + S
Sbjct: 245 RAGTTSNDFAINGVTIGKVDYTDGDGNGALVAAINSVKD 283
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + I + + V+ ++ D D
Sbjct: 477 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVD 536
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A++ N+ +L L +
Sbjct: 537 FAAESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ 573
>gi|56682613|gb|AAW21727.1| flagellin B [Aeromonas caviae]
Length = 299
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 75/208 (36%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + L + +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNTSSLNAQRNLMNTTKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQVNGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D +++Q E+ QL +++
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSAKDREALQKEVDQLGAEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ ++F G L + S A + + TV + +
Sbjct: 125 RISKDTTFAGTKLLDGNYSGSFQVGADANQTIGFSLSQADGFSISGIAAAANTTVDVGTV 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ V
Sbjct: 185 IGTAINVTAIFAAGSSISISTQNGAQQV 212
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 43/101 (42%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
++ + + + +++++ D + + ++G++ +R+ + + V R
Sbjct: 198 GSSISISTQNGAQQVLAAADAMLGVVDSKRAELGAVQNRLDSTIRNQANISENVSAARSR 257
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ DAD A+E+ ++ QQ A L+ N L L
Sbjct: 258 IRDADFATETANMTKQNILQQAASSILAQANQRPQSALQLL 298
>gi|91776338|ref|YP_546094.1| flagellin-like protein [Methylobacillus flagellatus KT]
gi|91710325|gb|ABE50253.1| flagellin-like protein [Methylobacillus flagellatus KT]
Length = 285
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 3/149 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN ++++A + L +L R+SSGLRV+ A D+AA SIA M + +
Sbjct: 3 AVINTNLASLNAQRNLTTSQSSLNSSLQRLSSGLRVNSAKDDAAGLSIATRMDAQIRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S A+ + K D + ++ D ++Q+E QLQ +
Sbjct: 63 VAIRNANDAISLAQTAEGALGKITDALQRMRELAVQSANATNESGDRDNLQAEFKQLQDE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAK 147
+ + G+ FN + GS T +
Sbjct: 123 ITRLTDGTKFNNKALFAGTAGSLTFQVGA 151
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 42/97 (43%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
++ IDT + + +G++ +R +++ + R++DAD
Sbjct: 189 TAADNATAAITAIDTALDQVNTSRATLGAVQNRFESVISSLQVSVENQSAAKSRILDADF 248
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
A+E+ L+ Q QQ L+ N+ +L+L RG
Sbjct: 249 AAETANLTRAQILQQAGTAMLAQANSVPNNVLTLLRG 285
>gi|212637795|ref|YP_002314320.1| flagellin [Shewanella piezotolerans WP3]
gi|212559279|gb|ACJ31733.1| Flagellin [Shewanella piezotolerans WP3]
Length = 268
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 62/150 (41%), Gaps = 3/150 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN++++ + + N L +R+S+GLR++ AAD+AA IA + ++ +
Sbjct: 1 MLSVHTNYASLVSQNSVTKNNDLLSNAMERLSTGLRINSAADDAAGLQIATRLNANVTGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQS 117
S + +S + A + + + + K T D ++ E +L
Sbjct: 61 ETASRNVNDATSMLQTADGALDELSTIANRQKEIATQAANGVNSAEDLTALNDEFQELTK 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAK 147
++ I + ++G + I
Sbjct: 121 EITRIVDNTEYSGNKLFDSLNAGVEFQIGA 150
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 48/130 (36%)
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
+S + S+ TD + A + + IDT I A
Sbjct: 138 DSLNAGVEFQIGAGATEQLSVSVTKADLAGVTDDISAAGAAKGAIDKIDTFIDKVGAERS 197
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
+G+ +R+ + + + + GR++DAD A ES ++ Q Q LS N
Sbjct: 198 TLGANINRLGHTGSNLANVTENTKAAAGRIMDADFAVESANMTKNQLLVQAGTNILSSAN 257
Query: 441 NSTARILSLF 450
+T ++ L
Sbjct: 258 QNTGLVMGLL 267
>gi|308071102|ref|YP_003872707.1| flagellin [Paenibacillus polymyxa E681]
gi|305860381|gb|ADM72169.1| Flagellin [Paenibacillus polymyxa E681]
Length = 256
Score = 114 bits (283), Expect = 5e-23, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++ + ++ + +++SSGLR++ AAD+AA SI++ M+ L
Sbjct: 3 INHNIPALNTHRNMQLNSTAASKNMEKLSSGLRINRAADDAAGLSISEKMRGQIRGLEQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ G S A+ M++ +++ +K + D +I++E+ QL Q+
Sbjct: 63 QRNVQDGISFTQTAEGAMNEVSSMLTRMKELGVQQLNDTYSAGDKSNIKAELGQLGGQID 122
Query: 121 DIARGSSFNGENWLRTD 137
I + FNG
Sbjct: 123 AILSTTKFNGIAISGGS 139
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 36/87 (41%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+S I+ +G++ +R+ + + + + R+ D DMA E LS
Sbjct: 170 LSATTAAIEAVAKQRASLGAMQNRLEYTSNNLGTTVENLTASESRIRDTDMAKEMVALSK 229
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q + LS N++ +LSL R
Sbjct: 230 NNILLQASQSMLSQANSAPQGVLSLLR 256
>gi|224417941|ref|ZP_03655947.1| flagellin B [Helicobacter canadensis MIT 98-5491]
gi|253827279|ref|ZP_04870164.1| flagellin [Helicobacter canadensis MIT 98-5491]
gi|313141482|ref|ZP_07803675.1| flagellin [Helicobacter canadensis MIT 98-5491]
gi|253510685|gb|EES89344.1| flagellin [Helicobacter canadensis MIT 98-5491]
gi|313130513|gb|EFR48130.1| flagellin [Helicobacter canadensis MIT 98-5491]
Length = 516
Score = 114 bits (283), Expect = 5e-23, Method: Composition-based stats.
Identities = 67/512 (13%), Positives = 132/512 (25%), Gaps = 64/512 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQI----------- 52
I TN +A++A N N+ +++SSGLR++ AAD+A+ +IA
Sbjct: 5 IYTNVNALNAHTSGLVNNRNMSESLEKLSSGLRINKAADDASGMAIADSLRSQAAALGQA 64
Query: 53 -----------------MKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK- 94
M L + + + D++ ++
Sbjct: 65 TRNANDAIGMIQTADKAMDEQIKILDTIKTKATQAAQDGQTTTTRNALQSDILRLMEELD 124
Query: 95 ---------ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+ +K Q + I +S + + S
Sbjct: 125 NIANTTSFNGQQMLSGAFTNKEFQIGAYSNITVKASIQPTNSHKIGHVRYETGAEMSVSA 184
Query: 146 AKSVIG-----SFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
S + D I +I T + + + L V
Sbjct: 185 GSSNLNEVTLRFLNTDGTNNYAIESIKISTSAGTGIGALAEAINKNSDTLGVRATYNVMG 244
Query: 201 QVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPN 260
Q I + A+ T + A
Sbjct: 245 QGAGAIASGTVRGLVINGIAIGDVNDVQKNDYDGRLINAINAQKERTGVQASLSISGALQ 304
Query: 261 TTSGTSGSKSPSVAASATYIRMGNSDIWVRATT---------------------KNSITS 299
TS + S VA+ ++ + G+ T S
Sbjct: 305 LTSTDGRAISVQVASGSSVLGGGSFAGVSGTTHAIVGRLTLIRLNARDILVSGTNFSQVG 364
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ G Y V+ S + ++ I + + + +
Sbjct: 365 LHSGATNIQNGSGIAQYTVNLRSVNGEFDANIASAIGANANTAVAAVNSNGIGAGVTSLE 424
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ + + +GS+ ++ + I + + V+ ++ D D A ES
Sbjct: 425 GAMAVMDMAQSAQEHLDKIRADLGSVQQQLVSTINNITVTQVNVKSAESQIRDTDFAEES 484
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N IL L +
Sbjct: 485 ANFSKTNILAQSGSFAMAQANQVQQNILQLLQ 516
>gi|300311386|ref|YP_003775478.1| flagellin filament structural protein [Herbaspirillum seropedicae
SmR1]
gi|124483540|emb|CAM32643.1| Flagellin protein; filament structural protein [Herbaspirillum
seropedicae]
gi|167731129|emb|CAP19677.1| flagellar protein [Herbaspirillum seropedicae]
gi|300074171|gb|ADJ63570.1| flagellin protein; filament structural protein [Herbaspirillum
seropedicae SmR1]
Length = 362
Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 68/197 (34%), Gaps = 3/197 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I TN +++ + L +L R+SSGLRV+ A D+AA +IA M S L+
Sbjct: 3 SVINTNIPSLNTQRNLNASQSSLNTSIQRLSSGLRVNSAKDDAAGLAIADRMNSQVKGLA 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S A+ +S D + ++ D K++ E TQL +
Sbjct: 63 VAQRNANDGISMAQTAEGALSTVGDNLQRMRELAVQAANGTNSAQDRKTLNDEYTQLSQE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ + G+SFNG+N ++A + + + +
Sbjct: 123 VFRVLNGTSFNGQNLFTGTGQGASAGTGSDSANVSASLTLSFQVGANVSDNKLNDQITIT 182
Query: 179 SSTDGTERYGLLDRNHK 195
Sbjct: 183 LDDLSNNGTMANVIGTS 199
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 45/96 (46%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + ++ + +D I ++ + G++ +R +++ + + R++D D
Sbjct: 267 SAQSDAQKAIQNLDKAISLISSKRAEFGAVQNRFSAVISNLQVSSENITSSRSRIMDTDY 326
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A E+ L+ Q QQ LS N++ ++LSL +
Sbjct: 327 AQETANLTRAQILQQAGNAMLSQANSAPQQVLSLLK 362
>gi|114054842|gb|ABI50021.1| FlaA [Clostridium botulinum]
Length = 258
Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 1 INHNLNAMNAHRQMAIXTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 61 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I+ + FN ++ + + ++
Sbjct: 121 RISSQTQFNTKSLINGAVSXDAXAMT 146
Score = 84.0 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 39/122 (31%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
D + T + + I + + + + + ++ ID I
Sbjct: 137 AVSXDAXAMTFQIGANSGQTIKLTIGSMDAKTLKVDKIKLDDTAANVTKQIATIDNAINS 196
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ K+G+ +R+ + + ++ R+ D DMA E + Q A
Sbjct: 197 VSKERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNXTKTNILTQAAQA 256
Query: 435 AL 436
L
Sbjct: 257 ML 258
>gi|289549210|ref|YP_003474198.1| flagellin domain protein [Thermocrinis albus DSM 14484]
gi|289182827|gb|ADC90071.1| flagellin domain protein [Thermocrinis albus DSM 14484]
Length = 510
Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats.
Identities = 58/506 (11%), Positives = 130/506 (25%), Gaps = 58/506 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIM---------- 53
+ N+ A S + + R+S+G+R+ DA+D+AA IA +
Sbjct: 5 VNFNYEAASTHTAILRNEREMNKSLLRLSTGMRILDASDDAAGLFIADQLSIVAAGLERG 64
Query: 54 ----KSDNGALSAVSDAIGLGSSKVDIAKA-GMSKAIDVMSTIKNKITAGVERGTDSKSI 108
++ +L +A G ++ + +S A D+
Sbjct: 65 NQNIQTGISSLRIAENAAGQIFDRLRAIYSRALSAANDINDPNARASLQQEINNLVDAIQ 124
Query: 109 QSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
+ + ++ + + ++ + SI S
Sbjct: 125 KIGTDTEYNGIKLLDGSFTNKYIHYGPRMNQTVLVSIGDVRAQSLGAYMVTGSGNVYSGA 184
Query: 169 YLDPET-------------------------------------------VLLDSSTDGTE 185
P T L S
Sbjct: 185 TALPTTNTDFTVDANEYLQVAGQYVVGGTSGYGPGLVDAATVAKNINNNPTLQSMGIEAT 244
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
N + + ST +
Sbjct: 245 ATNRSVANTFTSLVTYNNASGASVTLNFYVGSSTTPVFSISGLNETTTLQQLVDAINSQA 304
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
+ P+ A+ T+ ++ +V A+ T G + + +
Sbjct: 305 SASGAPITASIDNGRLVLKTTNGETIAVEATVTGATFGANGSVTVNLDQILQGAQAQQVT 364
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + V + T + + T ++ T + + E+ +
Sbjct: 365 ANGSSVYAVKVGQLNIAGTDSFSVSISTGLGGLGITSTTPTFKNLYTISVMDNTGAEQAL 424
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ + +IG++ + + D K D ++ + + D A E + + L
Sbjct: 425 LIVKKAQQKVDKVRAQIGAVMNNLQSIFDAQKTALDNTQEAENVIRNTDYAQEMSSFTKL 484
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q + Q ++ L+ N +L L R
Sbjct: 485 QIKMQASMAMLAQANQLPQMVLQLLR 510
>gi|113911616|gb|ABI48289.1| Fla1 flagellin [Lachnospiraceae bacterium 14-2]
Length = 385
Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats.
Identities = 39/253 (15%), Positives = 82/253 (32%), Gaps = 3/253 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N +AM+A+++L +++SSG R++ A D+AA I++ M+S L+
Sbjct: 2 VVQHNLTAMNANRQLGVTTSTQAKSSEKLSSGYRINRAGDDAAGLKISEKMRSQIRGLNK 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
S G S + A+ +++A ++ + G +I E++ L +L
Sbjct: 62 ASSNAQDGVSLIQTAEGALNEAHSILQRMNELAVQGANDTNQNVDRDAINQELSALVEEL 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FN ++ L + + + +
Sbjct: 122 DRISATTQFNKQSLLDGSFTGKNLQVGANQNQKITINIAAMNAAAIGIKPTQVGAMSGYL 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+T+ + + + A S TT L +A T
Sbjct: 182 TTNEVVKNQKVKNEAGTYTAADATTKASGTAGSAKLRASIANLAACTTQVGALYSAGNTK 241
Query: 240 DQAKGIATIPVPL 252
+
Sbjct: 242 TAYFKTNNGTITT 254
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 46/142 (32%)
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ + T S + + + V ++ + ++ +
Sbjct: 244 YFKTNNGTITTLSGLVRACAANLAACAAQVFAVASKPATTVSSPNVRDYQQATGTITMVQ 303
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
I ++ +G++ +R+ + + + + R+ D DMASE S
Sbjct: 304 NAINNVSSQRSALGALQNRLEHTIANLDNVAENTQAAESRIRDTDMASEMVEYSKNNILA 363
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N S +L L +
Sbjct: 364 QAGQSMLAQANQSNQGVLQLLQ 385
>gi|10716973|gb|AAG21990.1|AF274346_1 flagellin [Rhodobacter sphaeroides]
Length = 170
Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 63/150 (42%), Gaps = 3/150 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT+I TN A++A + +N R+S+GLR++ A D+AA +I + M + L
Sbjct: 1 MTTINTNIGAIAAQANMTKVNDQFNTAMTRLSTGLRINAAKDDAAGMAIGEKMTAQVMGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQS 117
+ G + VD + + ++ ++ D S+ +E QL +
Sbjct: 61 NQAIRNAQDGKNLVDTTEGAHVEVSSMLQRLRELAVQSSNDTNTAADRGSLAAEGKQLIA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAK 147
++ +A ++FNG L I
Sbjct: 121 EINRVAESTTFNGMKVLDGSFTGKQLQIGA 150
>gi|22127316|ref|NP_670739.1| lateral flagellin [Yersinia pestis KIM 10]
gi|145597828|ref|YP_001161904.1| flagellin [Yersinia pestis Pestoides F]
gi|162421569|ref|YP_001604836.1| lateral flagellin [Yersinia pestis Angola]
gi|165925105|ref|ZP_02220937.1| lateral flagellin [Yersinia pestis biovar Orientalis str. F1991016]
gi|167425200|ref|ZP_02316953.1| lateral flagellin [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229837419|ref|ZP_04457582.1| lateral flagellin [Yersinia pestis Pestoides A]
gi|270487661|ref|ZP_06204735.1| bacterial flagellin N-terminal domain protein [Yersinia pestis KIM
D27]
gi|21960396|gb|AAM86990.1|AE013947_9 lateral flagellin [Yersinia pestis KIM 10]
gi|145209524|gb|ABP38931.1| flagellin [Yersinia pestis Pestoides F]
gi|162354384|gb|ABX88332.1| lateral flagellin [Yersinia pestis Angola]
gi|165923305|gb|EDR40456.1| lateral flagellin [Yersinia pestis biovar Orientalis str. F1991016]
gi|167055963|gb|EDR65744.1| lateral flagellin [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229705542|gb|EEO91552.1| lateral flagellin [Yersinia pestis Pestoides A]
gi|270336165|gb|EFA46942.1| bacterial flagellin N-terminal domain protein [Yersinia pestis KIM
D27]
Length = 401
Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats.
Identities = 62/457 (13%), Positives = 118/457 (25%), Gaps = 64/457 (14%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN SA +A L + R+S+G R++ ADNAA I M+ +
Sbjct: 3 LSIHTNASAKTAINSLSNEGLANAKSSQRLSTGFRINSPADNAAGLQITNRMEKFLNSAG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
I + + IA G+++++ ++ +K T D ++IQ E ++L +
Sbjct: 63 QAKQNIQESIAMLQIADGGLAESVKTLNAMKKLATQAANDTNSAADREAIQKEFSELGKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSS---TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
L++ + +N E S D N + T
Sbjct: 123 LQNALNNTEYNSEKLFADGGKMRKELNFQSGTDAESSLKLDLNSVIAELTESVTKPGLKA 182
Query: 176 LLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
+ + E L K K + ++ T K A+
Sbjct: 183 NSGGTAEEKELARLEGLAKDAKSTAATTKSAETTLLVDDATGKGGKGGNASIDIIIPAHK 242
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
+ T + + +
Sbjct: 243 DTTGKDVAEKKIASGTAITPANITSMADAKAYWDKQEIETPKAVNEYVVKHSADSGVMNM 302
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
+
Sbjct: 303 QLADKDLAMK-------------------------------------------------- 312
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ +++ A ++ S S+ + M + +G + D D
Sbjct: 313 -ADKKLSDVIDAYGAFRATLGANQNRLQSSSNNLD-------NMISNTAQALGSIKDTDF 364
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
A E + + Q +V L N +T I +L +G
Sbjct: 365 ADEMKNHAQSEMLMQSSVMMLKKANAATQLISTLLQG 401
>gi|171057696|ref|YP_001790045.1| flagellin domain-containing protein [Leptothrix cholodnii SP-6]
gi|170775141|gb|ACB33280.1| flagellin domain protein [Leptothrix cholodnii SP-6]
Length = 286
Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats.
Identities = 37/215 (17%), Positives = 74/215 (34%), Gaps = 3/215 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I +N +M+A + +L R+SSGLRV+ A D+AA +IA+ M + ++
Sbjct: 3 STINSNIISMNAQRNQAASQSSLSTSMQRLSSGLRVNSAKDDAAGLAIAERMNAQVKGMN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S A+ + K D + ++ +D S+ E +L +
Sbjct: 63 VAVRNSNDAISLTQTAEGALGKVADSLQRMRELAVQSANATNSDSDRDSLDKEFGELAKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
++ + G++FNG+ L D G + + T
Sbjct: 123 IQRVMGGTTFNGKAVLGADAGDQDFQVGANTTSDDTITITTADMTADASLTAVAGTDNTG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ + + I L ++
Sbjct: 183 AGRAVIDSTTNGTVDTVIDDIDAALDKVNSERATM 217
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 51/142 (35%)
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ ++ T + D+ + T N ++ ++ ID
Sbjct: 145 QDFQVGANTTSDDTITITTADMTADASLTAVAGTDNTGAGRAVIDSTTNGTVDTVIDDID 204
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + +G+ SR +++ + R++DAD ASE+ LS Q Q
Sbjct: 205 AALDKVNSERATMGASQSRFDSVISNLQVSVENQSAARSRIMDADFASETANLSRAQILQ 264
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q ++ N +++SL R
Sbjct: 265 QAGNAMIAQANQLPQQVMSLLR 286
>gi|77918718|ref|YP_356533.1| flagellin/flagellar hook-associated protein [Pelobacter
carbinolicus DSM 2380]
gi|77544801|gb|ABA88363.1| flagellin/flagellar hook-associated protein [Pelobacter
carbinolicus DSM 2380]
Length = 280
Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 75/183 (40%), Gaps = 3/183 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I TN +++A + L +L R+SSGLR++ A D+AA +I+ M + ++
Sbjct: 3 LTINTNVQSLNAQRNLSKSQSSLSNSMQRLSSGLRINSAKDDAAGLAISDRMSAQIKGMN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S A+ + + +++ ++ D ++ SE +L+++
Sbjct: 63 QAVRNSNDAISFAQTAEGALGEMTNILQRMRELSVQSANGTNSTDDRTALNSEFGELKNE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I + FNG+N L +S A++ + + + + T TV
Sbjct: 123 LDRIVDTTKFNGQNLLDGTYSASDAAVFQVGANAGEKISVAIGNMDTNALSGGGTTVNGA 182
Query: 179 SST 181
+
Sbjct: 183 TIA 185
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 30/231 (12%), Positives = 68/231 (29%)
Query: 220 KKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ + A + A A +S + S
Sbjct: 49 AISDRMSAQIKGMNQAVRNSNDAISFAQTAEGALGEMTNILQRMRELSVQSANGTNSTDD 108
Query: 280 IRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGY 339
NS+ + I + + + ++ + + I +
Sbjct: 109 RTALNSEFGELKNELDRIVDTTKFNGQNLLDGTYSASDAAVFQVGANAGEKISVAIGNMD 168
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
+ N ++ ID + + G +G+ +R + +
Sbjct: 169 TNALSGGGTTVNGATIASAGGASTAIASIDGALNQVDSLRGNLGAKQNRFESTIANLNNV 228
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + R+VDAD+A+E+++++ + QQ V L+ N + LSL
Sbjct: 229 SENLSAARSRIVDADIATETSQMTKMNILQQAGVSILAQANQTPQLALSLI 279
>gi|170725964|ref|YP_001759990.1| flagellin domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169811311|gb|ACA85895.1| flagellin domain protein [Shewanella woodyi ATCC 51908]
Length = 272
Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats.
Identities = 33/228 (14%), Positives = 83/228 (36%), Gaps = 3/228 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +++ A + L + + NL +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSLKAQKNLNNSSGNLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S IA+ M + +++ +++ D ++++E+ QL +++
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQAENGANSADDIAALKAEMDQLATEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I ++F + + G ++ K T++ +
Sbjct: 124 DAIGTSTAFGNTKLMTGGFSAGKTFQVGHQEGEDVKVTVKKTDKTSLSVGSLALATSANR 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
++ + + + +++ S +
Sbjct: 184 ASALGAIDKAIKTIDTQRADLGAIQNRLSHNISNSANTQANVADAKSR 231
Score = 99.4 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 55/209 (26%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + + + + A DI + + ++
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQAENGANSADDIAALKAEMDQLATEI 123
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
++ A + E T + + A
Sbjct: 124 DAIGTSTAFGNTKLMTGGFSAGKTFQVGHQEGEDVKVTVKKTDKTSLSVGSLALATSANR 183
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ ID IK +G+I +R+ + V R+VD D A E++
Sbjct: 184 ASALGAIDKAIKTIDTQRADLGAIQNRLSHNISNSANTQANVADAKSRIVDVDFAKETSA 243
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q QQ L+ N LSL
Sbjct: 244 MTKNQVLQQTGSAMLAQANQLPQVALSLL 272
>gi|221214238|ref|ZP_03587210.1| flagellin [Burkholderia multivorans CGD1]
gi|221165893|gb|EED98367.1| flagellin [Burkholderia multivorans CGD1]
Length = 667
Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats.
Identities = 49/370 (13%), Positives = 117/370 (31%), Gaps = 3/370 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQNALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A +G+S+ + I+ +D +++Q E+TQ +
Sbjct: 61 NQGVSNANDGVSMIQTASSGLSQITSSLQRIRQLAVQASSGSLSTSDQQALQQEVTQQIA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG+N L G+ T + +V + + + + ++ L L
Sbjct: 121 EVNRIASQTNYNGKNVLDGSAGNITFQVGANVGQTISLNLSQSLSAASLGKGLVSAGSTL 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + + + + + + + A +
Sbjct: 181 GTLNNLSLDANGNSVTSGAAITAINVLSDGNGGFTYTDQNNQALSAKAVKNLFGNSTGVG 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ L + + + + + + ++
Sbjct: 241 GALNITASGSGSALLSTSQLSTISQANATPPAGTNTVIGTITGLSIDASTGKDVAAGTQG 300
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + N + + +T + S ++ + N
Sbjct: 301 AITSITVKTNGSGGFNFYDQTGAQLSTGLVGDNSGTNPGSLLTITKGTGGNGDSVSFTNS 360
Query: 358 KLAMEEMVSF 367
++
Sbjct: 361 VSTQLANINA 370
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/317 (11%), Positives = 86/317 (27%)
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
D S T S++ + + +V + + ++
Sbjct: 351 NGDSVSFTNSVSTQLANINAATFSSQVTSVNGAVTMALPSATTTLGKITGLNVDTSGKDV 410
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ + + + T + + Q G T
Sbjct: 411 AAGTAGAITSLTVTEDTSGNIHFADQNGTDVTATMTAAGTGLFSVVQGNGTTTKASFAMQ 470
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
A T SGT S + + + + S + V+ +
Sbjct: 471 GTATAPTISGTITGLSLDASGNNVAPGTQGAITSITVKNTGGTLSYTDQNGADVSSLFTG 530
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + ++ + S+ N ++ + + + ID +
Sbjct: 531 SAGSVAFKSGVSPISYSAPQLAAFSSIDANNAPGTVSSIDISTTTGANQAMESIDNALAT 590
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G+ +R + + + ++ DA+ A E+ LS Q QQ +
Sbjct: 591 VNNIQASLGAAQNRFTAISTTQQAQSTNLSQAQSQIQDANFAQETANLSKAQVLQQAGIS 650
Query: 435 ALSIVNNSTARILSLFR 451
L+ N+ ++L L +
Sbjct: 651 VLAQANSLPQQVLKLLQ 667
>gi|53711289|gb|AAU90046.1| FliC [Erwinia amylovora CFBP1430]
Length = 271
Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 56/152 (36%), Gaps = 3/152 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSG R++ + ++AA +I+ S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSMERLSSGSRITSSKEDAAGQAISNRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S + ++ + + ++ +D SIQ EI ++
Sbjct: 64 AARNANDGISLAQTTEGALTGINNNLQRVRELTVQAKNGTNSDSDLSSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
++ + FNG L D A
Sbjct: 124 DRVSGQTQFNGVKVLSQDNTMKIQVGANDNET 155
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 31/75 (41%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ ++ +D I +G++ +R+ + + R+ DAD A+E + +
Sbjct: 191 DPLALLDKAISSVDKLRSGLGAVQNRLDSAVTNLNNTTTNLSSAQSRIQDADYATEVSNM 250
Query: 423 SALQTQQQLAVQALS 437
S Q QQ L+
Sbjct: 251 SKAQIIQQAGNSVLA 265
>gi|42526515|ref|NP_971613.1| flagellar filament core protein [Treponema denticola ATCC 35405]
gi|41816708|gb|AAS11494.1| flagellar filament core protein [Treponema denticola ATCC 35405]
gi|325473454|gb|EGC76649.1| flagellar filament core protein [Treponema denticola F0402]
Length = 286
Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats.
Identities = 42/200 (21%), Positives = 81/200 (40%), Gaps = 3/200 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM + + L + + +++SSGLR++ A D+A+ ++++ M+S L+
Sbjct: 3 INHNMSAMFSQRTLGHTHLLNQKNIEKLSSGLRINRAGDDASGLAVSEKMRSQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S G S + +A+A + + DV+ I+ D IQ E++QL +++
Sbjct: 63 SANAQNGISFIQVAEAFLQETTDVIQRIRELSIQSSNGIYSAEDRLYIQVEVSQLIAEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG N L T + F N + + + + + +
Sbjct: 123 RIASHAQFNGMNMLTGRFAQETGENTVTASMWFHIGANMDQRTRAYIGTMTAKALGVRNI 182
Query: 181 TDGTERYGLLDRNHKIKVEP 200
D + +
Sbjct: 183 GDESIMTIETPEKANRAIGT 202
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 40/115 (34%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + + + +D IK +G+ +R+ L I
Sbjct: 172 MTAKALGVRNIGDESIMTIETPEKANRAIGTLDEAIKKINKQRADLGAYQNRLELTVVGI 231
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + ++ R+ D DMA E + Q Q L+ N +T +++L R
Sbjct: 232 NIAAENLQASESRIRDVDMAKEMVDYTKNQILTQSGTAMLAQANQATQSVMTLLR 286
>gi|86152946|ref|ZP_01071151.1| flagellin A [Campylobacter jejuni subsp. jejuni HB93-13]
gi|85843831|gb|EAQ61041.1| flagellin A [Campylobacter jejuni subsp. jejuni HB93-13]
Length = 575
Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 94/279 (33%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNANELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + + I S + + + S
Sbjct: 125 NIANTTAFNGKQLLSGNFTNQEFQIGSSSNQTIKASIGPTQSSKIGVTRFETGSQSFTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + + + I+ K + +K A
Sbjct: 185 VVGLTIKNYNGIEDFKFDNVVISTSVGTGLGALAEEINKSADKTGVRATYDVKTTGAYAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + N G + + S S
Sbjct: 245 KAGTTSQDFAINGVTIGQINYKDGDNNGQLISAINSVKD 283
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 66/206 (32%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
I A + G + + + SA + G+ + S +
Sbjct: 370 GQISAANADAMGFNSYNGGGAKQILQASSISAFMSQAGSGFSAGSGFSAGSGKGYSTILS 429
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+V V +T T + S ++ T ++ H T ++
Sbjct: 430 GSVQIVSSTASMSSTYVISEGSGFSAGSGNSQFAALKTSTVSAHEATAGVTTLKGAMAVM 489
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+T I IGS+ +++ + + I + + V+ + D D ASES S
Sbjct: 490 DIAETAITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFASESANFSKY 549
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q A+S N +L L +
Sbjct: 550 NILAQSGSYAMSQANAVQQNVLKLLQ 575
>gi|226326543|ref|ZP_03802061.1| hypothetical protein PROPEN_00393 [Proteus penneri ATCC 35198]
gi|225205142|gb|EEG87496.1| hypothetical protein PROPEN_00393 [Proteus penneri ATCC 35198]
Length = 163
Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 39/97 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
A+E +S +D + + +G++ +R+ + + R DAD
Sbjct: 67 MTLDPAVENPLSTLDKALSQVDSLRSAMGAVQNRLDSTIPNFGNAVNNLTASYSRFEDAD 126
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+E + +S Q QQ L+ N +LSL R
Sbjct: 127 YATEVSNMSKGQILQQAGTSVLAQANQMPQNVLSLLR 163
>gi|157959893|ref|YP_001499927.1| flagellin domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157844893|gb|ABV85392.1| flagellin domain protein [Shewanella pealeana ATCC 700345]
Length = 272
Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats.
Identities = 34/227 (14%), Positives = 78/227 (34%), Gaps = 3/227 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S++TN+++ A + N L +R+S+GLR++ AAD+AA IA M+++ +
Sbjct: 1 MLSVMTNNASNIAQNSVNRNNDLLSNAMERLSTGLRINSAADDAAGLQIASRMEANVTGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQS 117
+ + +S + A + + + + K T D ++ E T L +
Sbjct: 61 ETANRNVSDATSMLQTADGALDELATIANRQKELATQAANGVNSTADRAALNDEFTALTA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ I +++ G + G+ + I + +
Sbjct: 121 EMTRIMEKTTYAGNDLFGAISGNVSFQIGAGSGETLTVSGASGITGIRSGIATLSGVKAS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
E +D ++ + + ++
Sbjct: 181 TLGAQIGEIDDFIDAVGSMRSDLGANINRLGHTASNLTNVTENTKAA 227
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 38/88 (43%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ ID I + +G+ +R+ + + + + GR++DAD ASE+ +
Sbjct: 184 AQIGEIDDFIDAVGSMRSDLGANINRLGHTASNLTNVTENTKAAAGRIMDADFASETAAM 243
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLF 450
S Q Q LS N +T ++ L
Sbjct: 244 SKNQLLVQAGTNILSSSNQNTGLVMGLL 271
>gi|86150904|ref|ZP_01069120.1| flagellin subunit protein FlaB [Campylobacter jejuni subsp. jejuni
260.94]
gi|315124777|ref|YP_004066781.1| flagellin subunit protein FlaB [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85842074|gb|EAQ59320.1| flagellin subunit protein FlaB [Campylobacter jejuni subsp. jejuni
260.94]
gi|315018499|gb|ADT66592.1| flagellin subunit protein FlaB [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 577
Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 94/279 (33%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNANELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + + I S + + + S
Sbjct: 125 NIANTTAFNGKQLLSGNFTNQEFQIGSSSNQTIKASIGPTQSSKIGVTRFETGSQSFTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + + + I+ K + +K A
Sbjct: 185 VVGLTIKNYNGIEDFKFDNVVISTSVGTGLGALAEEINKSADKTGVRATYDVKTTGAYAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + N G + + S S
Sbjct: 245 KAGTTSQDFAINGVTIGQINYKDGDNNGQLISAINSVKD 283
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 48/138 (34%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T T + S + ++ T ++ H T ++ +T I
Sbjct: 440 TASMSSTYVISAGSGFSVGSGNSQFAALKTSTVSAHEATAGVTTLKGAMAVMDIAETAIT 499
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
IGS+ +++ + + I + + V+ + D D ASES S Q
Sbjct: 500 NLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFASESANFSKYNILAQSGS 559
Query: 434 QALSIVNNSTARILSLFR 451
A+S N +L L +
Sbjct: 560 YAMSQANAVQQNVLKLLQ 577
>gi|13182941|gb|AAK14996.1| flagellin [Bordetella bronchiseptica]
Length = 348
Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats.
Identities = 59/414 (14%), Positives = 109/414 (26%), Gaps = 69/414 (16%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
L +R+SSGLR++ A D+AA +IA ++ L+ + G S +
Sbjct: 1 SQSALGSAIERLSSGLRINSAKDDAAGQAIANRFTANVKGLTQAARNANDGISIAQTTEG 60
Query: 80 GMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ + + I+ +D SIQ E+ Q ++ IA + FNG L++
Sbjct: 61 ALNEINNNLQRIRELTVQASNGTNSASDIDSIQQEVNQRLEEINRIADQTDFNGIKVLKS 120
Query: 137 DLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
T SI + D + Y + + + L
Sbjct: 121 KTDDVTLSIQVGAKDNETIDIKIAANQSWNQYDALGTVPSGTVNGEARKVAALGFDVLSA 180
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
++ V A
Sbjct: 181 TASTADVEA--------------------------------------ISFDAAVATAEAK 202
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
TS + + A + G D T + G VA
Sbjct: 203 HTAAATSVVNQYGDAANPQYAVVVTDGGVDTAYALTFDKDGKATLGEELGAVATQAAAAS 262
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
+ + + + + E V+ ++ I +
Sbjct: 263 TTAITNASTGITVSGGAADALSKLDDAMKAVDEQRSSLGAIQNRFESTVANLNNTITNLS 322
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
AA R+ D+D A+E + ++ Q QQ
Sbjct: 323 AAR----------------------------SRIEDSDYATEVSNMTKNQILQQ 348
>gi|442487|dbj|BAA05151.1| flagellin [Shigella boydii]
Length = 568
Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats.
Identities = 42/273 (15%), Positives = 80/273 (29%), Gaps = 3/273 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTH 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G + +S+ + + I+ +D SIQ EI ++
Sbjct: 64 GARNANDGILVAQTTEGALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ + FNG N L D A I ++ + + +
Sbjct: 124 DRVSGQTQFNGVNALAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGTIAN 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + S + +S A A
Sbjct: 184 KAATVSDLTAAGATGTGPYAVTTNNTVLSARIALSRLKTGDTVTTTGSSAAIYTYDAAKG 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ + +GT+ S +
Sbjct: 244 NFTTQATVADGDVVNFANTLKPAAGTTASGVYT 276
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/317 (12%), Positives = 95/317 (29%)
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
D + + + +D + +
Sbjct: 252 ADGDVVNFANTLKPAAGTTASGVYTRSTGDVKFDVDANGDVTIGGKAAYLDATGNLSTNN 311
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + T + + T + + T+ + T+ + +A
Sbjct: 312 AGIASSAKLSDLFASGSTLATTGSIQLSGTTYNFGAAATSGVTYTKTVSADTVLSTVQSA 371
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
A +G + + + ++ N++ + + T ++ N
Sbjct: 372 ATANTAVTGATIKYNTGIQSATASFGGANTNGAGNSNDTYTDADKELTTTASYTINYNVD 431
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
T + + K + + +N T T+ + A ++ ++ +D I
Sbjct: 432 KDTGTVTVASNGAGATGKFAATVGAQAYVNSTGKLTTETTSAGTATKDPLAALDEAISSI 491
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G+I +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 492 DKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 551
Query: 436 LSIVNNSTARILSLFRG 452
L+ N ++LSL +G
Sbjct: 552 LAKANQVPQQVLSLLQG 568
>gi|127512287|ref|YP_001093484.1| flagellin domain-containing protein [Shewanella loihica PV-4]
gi|126637582|gb|ABO23225.1| flagellin domain protein [Shewanella loihica PV-4]
Length = 273
Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats.
Identities = 33/228 (14%), Positives = 78/228 (34%), Gaps = 3/228 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M A + L + NL +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 NVNTNVTSMKAQKNLNTSSQNLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQL 119
S I++ M + +++ +++ + +Q+ E+ QL ++
Sbjct: 64 GMRNANDAISIAQISEGAMQEQTNMLQRMRDLSIQSENGANSTADLQALKDEMDQLAEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I ++F L + + G + G + +
Sbjct: 124 TAIGNSTAFGNTKLLTGEFSAGKLFQVGHQDGEDVTISVGTLNAGVLSVNSLTVLTSAGR 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+ + + + + +++ S +
Sbjct: 184 DSAIGKIDAAIKVIDTQRAKLGAVQNRLAHNISNSANTQANVADAKSR 231
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 28/209 (13%), Positives = 59/209 (28%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + + + ++ + +D+ + + +
Sbjct: 64 GMRNANDAISIAQISEGAMQEQTNMLQRMRDLSIQSENGANSTADLQALKDEMDQLAEEI 123
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
++ A + + L E + N+
Sbjct: 124 TAIGNSTAFGNTKLLTGEFSAGKLFQVGHQDGEDVTISVGTLNAGVLSVNSLTVLTSAGR 183
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ + ID IK K+G++ +R+ + V R+VD D A E++
Sbjct: 184 DSAIGKIDAAIKVIDTQRAKLGAVQNRLAHNISNSANTQANVADAKSRIVDVDFAKETST 243
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q QQ L+ N LSL
Sbjct: 244 MTKNQVLQQTGSAMLAQANQLPQVALSLL 272
>gi|146293682|ref|YP_001184106.1| flagellin domain-containing protein [Shewanella putrefaciens CN-32]
gi|145565372|gb|ABP76307.1| flagellin domain protein [Shewanella putrefaciens CN-32]
Length = 273
Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats.
Identities = 38/228 (16%), Positives = 75/228 (32%), Gaps = 3/228 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M A + L + L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSMKAQKNLNTSSSGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S IA+ M + +++ +++ D +IQ EI QL ++
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQAENGANSTDDLDAIQKEIDQLAEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I ++F + + + G I G ++
Sbjct: 124 TAIGDSTAFGNTKLMTGNFSAGKTFQVGHQEGEDITISVGTNNAGSLMVSTLTIATSGGR 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
ST + + ++ S +
Sbjct: 184 STALAAIDAAIKNIDNQRAALGAKQNRLAYNISNSANTQANVADAKSR 231
Score = 95.6 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 27/209 (12%), Positives = 54/209 (25%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + + + + A D+ + + +
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQAENGANSTDDLDAIQKEIDQLAEEI 123
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ A + + E + + +T
Sbjct: 124 TAIGDSTAFGNTKLMTGNFSAGKTFQVGHQEGEDITISVGTNNAGSLMVSTLTIATSGGR 183
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ ID IK +G+ +R+ + V R+VD D A E++
Sbjct: 184 STALAAIDAAIKNIDNQRAALGAKQNRLAYNISNSANTQANVADAKSRIVDVDFAKETSV 243
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q QQ L+ N LSL
Sbjct: 244 MTKNQVLQQTGSAMLAQANQLPQVALSLL 272
>gi|13182943|gb|AAK14997.1| flagellin [Bordetella bronchiseptica]
Length = 350
Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats.
Identities = 57/414 (13%), Positives = 112/414 (27%), Gaps = 67/414 (16%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
L +R+SSGLR++ A D+AA +IA ++ L+ + G S +
Sbjct: 1 SQSALGSAIERLSSGLRINSAKDDAAGQAIANRFTANVKGLTQAARNANDGISIAQTTEG 60
Query: 80 GMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ + + I+ +D SIQ E+ Q ++ IA + FNG L++
Sbjct: 61 ALNEINNNLQRIRELTVQASNGTNSASDIDSIQQEVNQRLEEINRIAEQTDFNGIKVLKS 120
Query: 137 DLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
+ T SI + D Y + + L
Sbjct: 121 NATDMTLSIQVGAKDNETIDIKIDRNSNWNLYDAVGTVPGGTVNGEARTVNALGFDVLSA 180
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
+ A + AA
Sbjct: 181 VTTTIASDTVT------------------------------------FDAAVAAAEQAAG 204
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
AA S S + + + G + K+ + + ++
Sbjct: 205 AAVGDGSVVSYGDTANPQYAVVVDNAGTMTSYALTFDKDGKAALGDQLGAVASQAAEAAV 264
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
+ + + + + + E V+ ++ I +
Sbjct: 265 GTNDVAAGANVTVSGGAADALSKLDDAMKAVDEQRSSLGAIQNRFESTVANLNNTITNLS 324
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
AA R+ D+D A+E + ++ Q QQ
Sbjct: 325 AARS----------------------------RIEDSDYATEVSNMTKNQILQQ 350
>gi|5107851|gb|AAD28525.2|AF128954_1 flagellin [Escherichia coli]
Length = 560
Score = 113 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 47/356 (13%), Positives = 90/356 (25%), Gaps = 3/356 (0%)
Query: 19 DINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAK 78
L +R+SSGLR++ A D+AA +IA S+ L+ + G S +
Sbjct: 1 KNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTE 60
Query: 79 AGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+S+ + + I+ +D SIQ EI ++ ++ + FNG N L
Sbjct: 61 GALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLA 120
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
D A I ++ + + + + +
Sbjct: 121 KDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGSGTIANKAATISDLTAAKMDAA 180
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ S A + + +
Sbjct: 181 TNTITTTNNALTASKALDQLKDGDTVTIKADAAQTATVYTYNASAGNFSFSNVSNNTSEK 240
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
+ ++ S A + T + +
Sbjct: 241 AGDVAASLLPPAGQTASGVYKAASGELNFDVDANGKITIGGQKAYLTSDGNLTTNDAGGA 300
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ + S+ T + T A + VSF DT
Sbjct: 301 TAATLDGLFKKAGDGQSIGFKKTASVTMGGTTYNFKTGADADAATANAGVSFTDTA 356
Score = 75.9 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/356 (10%), Positives = 86/356 (24%), Gaps = 2/356 (0%)
Query: 82 SKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSS 141
+ + S + + D+A ++
Sbjct: 204 DTVTIKADAAQTATVYTYNASAGNFSFSNVSNNTSEKAGDVAASLLPPAGQTASGVYKAA 263
Query: 142 TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
+ + V + G+ T D L ++ + I +
Sbjct: 264 SGELNFDVDANGKITIGGQKAYLTSDGNLTTNDAGGATAATLDGLFKKAGDGQSIGFKKT 323
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
+ + Y+ A+ T A A T
Sbjct: 324 ASVTMGGTTYNFKTGADADAATANAGVSFTDTASKETVLNKVATAKQGKAAAADGDTSAT 383
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
+ SG ++ +A + + T T T Y +D
Sbjct: 384 ITYKSGVQTYQAVFAAGDGTASAKYADKADVSNATATYTDADGEMTTIGSYTTKYSIDAN 443
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM--EEMVSFIDTQIKCATAAA 379
+ + + + ++ + ++ + +D I
Sbjct: 444 NGKVTVDSGTGTGKYAPKVGAEVYVSANGTLTTDATSEGTVTKDPLKALDEAISSIDKFR 503
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G+I +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 504 SSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 559
>gi|327394253|dbj|BAK11675.1| flagellar biosynthesis FliC [Pantoea ananatis AJ13355]
gi|327394254|dbj|BAK11676.1| flagellar biosynthesis FliC [Pantoea ananatis AJ13355]
Length = 310
Score = 113 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 40/205 (19%), Positives = 73/205 (35%), Gaps = 3/205 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNTLSLVTQNNLSKSQSSLGTAIERLSSGLRINSAKDDAAGEAIANRFSSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ +++ + + +++ D SIQ+E+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALTEVNNNLQRVRDLTVQAQNSSNSASDIDSIQAEVNQRMQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L T GSST +
Sbjct: 121 EIDRVTKQTDFNGIKVLNTGSGSSTYNFQVGAKDGETIGITISASDGFDLASAGQTGTTQ 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQV 202
++ T + + V
Sbjct: 181 NTRAMTTGDTVNGNARTTSAIGFDV 205
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 76/257 (29%)
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ + + + + + + ++ + A+ + A
Sbjct: 54 SSNINGLTVAARNANDGISLSQTAEGALTEVNNNLQRVRDLTVQAQNSSNSASDIDSIQA 113
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
++ G+S + K+ T + S + +
Sbjct: 114 EVNQRMQEIDRVTKQTDFNGIKVLNTGSGSSTYNFQVGAKDGETIGITISASDGFDLASA 173
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
T++T + D S + ++ + A T A ++ ID IK
Sbjct: 174 GQTGTTQNTRAMTTGDTVNGNARTTSAIGFDVLKGAVTGGTGGAAAGTTPLADIDKAIKA 233
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G+ +R + + R+ DAD A+E + +S Q QQ
Sbjct: 234 VDNQRSLLGASQNRFESTISNLNNTVTNLTAARSRIQDADYATEVSNMSRAQILQQAGSS 293
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 294 VLAQANQVPQTMLSLLR 310
>gi|218458028|ref|ZP_03498119.1| flagellin C protein [Rhizobium etli Kim 5]
Length = 223
Score = 113 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 86/146 (58%), Positives = 104/146 (71%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AM+A Q LR IN +LE Q+RVSSG RV AADNAAYWSIA M+SDN AL
Sbjct: 16 MTSILTNVAAMAALQTLRGINDSLESTQNRVSSGYRVEKAADNAAYWSIATTMRSDNKAL 75
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A + M AIDV+S IK KI A E+G D +Q EI QLQ QL
Sbjct: 76 SAVSDALGLGAAKVDTAYSAMDSAIDVISEIKAKIVAATEKGVDKTKVQEEIGQLQQQLL 135
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA+ +SF+GENW+ G+ +
Sbjct: 136 SIAQSASFSGENWVAGADGTKSVVST 161
>gi|319427080|gb|ADV55154.1| flagellin domain protein [Shewanella putrefaciens 200]
Length = 265
Score = 113 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 66/178 (37%), Gaps = 3/178 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M A + L L +R+SSGLR++ A D+AA +I+ + S
Sbjct: 4 TVNTNVTSMKAQKNLNASGSALSTSMERLSSGLRINSAKDDAAGLAISNRLNSQIRGQEV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
S IA+ M + +++ +++ D ++Q+E +L +++
Sbjct: 64 GMRNANDAISVAQIAEGAMQEQTNMLQRMRDLSVQATNGANSPSDIDALQAEYDELVAEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
I ++F L + + D + T + L
Sbjct: 124 DAIGANTAFGDTKVLDGTFAAKDFQTGHTATEKVTVDIADMSGVGTAATGVVGTATLA 181
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 50/137 (36%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ DT+ + + VT++I + + ++ +D QI
Sbjct: 129 NTAFGDTKVLDGTFAAKDFQTGHTATEKVTVDIADMSGVGTAATGVVGTATLALVDAQIA 188
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R+ ++ V R+VD D A E++ ++ Q QQ
Sbjct: 189 AVDAERANLGALQNRLSHNIANNANVQANVADAKSRIVDVDFAKETSAMTKNQVLQQTGS 248
Query: 434 QALSIVNNSTARILSLF 450
L+ N LSL
Sbjct: 249 AMLAQANQLPQVALSLL 265
>gi|24374750|ref|NP_718793.1| flagellin [Shewanella oneidensis MR-1]
gi|24349414|gb|AAN56237.1|AE015761_7 flagellin [Shewanella oneidensis MR-1]
Length = 273
Score = 113 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 36/228 (15%), Positives = 81/228 (35%), Gaps = 3/228 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M A + L N L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSMKAQKNLNTSNSGLSTSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
S IA+ M + +++ +++ + SI++E+ QL +++
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTIQSENGANSTADLVSIKAEMDQLATEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I ++F L + G I+ T++ +
Sbjct: 124 DSIGNSTAFGNTKLLTGTFSAGKVFQVGHQEGEDIKVTVKASNKTSLSVGALNNATSANR 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
++ + + + + +++ S +
Sbjct: 184 ASSLAKIDAAIKTIDSQRADLGAVQNRLAHNISNSANTQANVADAKSR 231
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 25/209 (11%), Positives = 57/209 (27%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + + + + + +D+ + + ++
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTIQSENGANSTADLVSIKAEMDQLATEI 123
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
++ A + + E + +
Sbjct: 124 DSIGNSTAFGNTKLLTGTFSAGKVFQVGHQEGEDIKVTVKASNKTSLSVGALNNATSANR 183
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ ID IK + +G++ +R+ + V R+VD D A E++
Sbjct: 184 ASSLAKIDAAIKTIDSQRADLGAVQNRLAHNISNSANTQANVADAKSRIVDVDFAKETSA 243
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q QQ L+ N LSL
Sbjct: 244 MTKYQVLQQTGSAMLAQANQLPQVALSLL 272
>gi|117919781|ref|YP_868973.1| flagellin domain-containing protein [Shewanella sp. ANA-3]
gi|117612113|gb|ABK47567.1| flagellin domain protein [Shewanella sp. ANA-3]
Length = 270
Score = 113 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 3/147 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +++ A + L L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSLKAQKNLNTSASGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S I++ M + +++ +++ D +IQ EI QL ++
Sbjct: 64 GMRNANDAISIAQISEGAMQEQTNMLQRMRDLTVQSENGANSTDDLDAIQKEIDQLALEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIA 146
+I ++F L T +
Sbjct: 124 TEIGDNTAFGSTKLLDGTFSGKTFQVG 150
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 32/79 (40%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
IK + +G+ +R+ + + R+VD D A E+++++ Q QQ
Sbjct: 192 IKTIDSQRADLGAKQNRLAYNISNSANTQANIADAKSRIVDVDFAKETSQMTKNQVLQQT 251
Query: 432 AVQALSIVNNSTARILSLF 450
L+ N LSL
Sbjct: 252 GSAMLAQANQLPQVALSLL 270
>gi|153001463|ref|YP_001367144.1| flagellin domain-containing protein [Shewanella baltica OS185]
gi|160876194|ref|YP_001555510.1| flagellin domain-containing protein [Shewanella baltica OS195]
gi|151366081|gb|ABS09081.1| flagellin domain protein [Shewanella baltica OS185]
gi|160861716|gb|ABX50250.1| flagellin domain protein [Shewanella baltica OS195]
gi|315268384|gb|ADT95237.1| flagellin domain protein [Shewanella baltica OS678]
Length = 271
Score = 113 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 41/262 (15%), Positives = 94/262 (35%), Gaps = 3/262 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M A + L L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSMKAQKNLNASGNALATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S IA+ M + +++ +++ +D +IQ+EI QL ++
Sbjct: 64 GMRNANDGISVAQIAEGAMQEQTNMLQRMRDLSVQAVNGANSTSDKDAIQAEIDQLALEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ ++F L + + + + +G T L + S
Sbjct: 124 TAISNTTAFGDTKLLSGGFSAKSFQVGHQEGENISISISGTDAGTLSVDALLVSSDSAAS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ G + + + + ++ +++ T + + +
Sbjct: 184 TSIGLIDAAIKTIDTQRAKLGATQNRLAHNISNSANTQANVADAKSRIVDVDFAKETSQM 243
Query: 240 DQAKGIATIPVPLPAAPAAPNT 261
+ + + + A
Sbjct: 244 TKNQVLQQTGSAMLAQANQLPQ 265
Score = 95.6 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 37/96 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ A + ID IK K+G+ +R+ + V R+VD D
Sbjct: 176 VSSDSAASTSIGLIDAAIKTIDTQRAKLGATQNRLAHNISNSANTQANVADAKSRIVDVD 235
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A E+++++ Q QQ L+ N LSL
Sbjct: 236 FAKETSQMTKNQVLQQTGSAMLAQANQLPQVALSLL 271
>gi|237653549|ref|YP_002889863.1| flagellin domain protein [Thauera sp. MZ1T]
gi|237624796|gb|ACR01486.1| flagellin domain protein [Thauera sp. MZ1T]
Length = 278
Score = 113 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I TN ++++A + L +L R+SSGLRV+ A D+AA +IA+ M S ++
Sbjct: 4 TINTNVASLNAQRNLTSSQSSLGTTLQRLSSGLRVNSAKDDAAGLAIAERMNSQVRGMNV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S A+ + K D + +++ D ++Q E QLQ ++
Sbjct: 64 AIRNSSDAISLSQTAEGALGKIGDSLQRMRDLAVQSANGTNTSGDRDNLQLEFRQLQDEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAK 147
+ + + FN + L +
Sbjct: 124 LRVTKDTKFNNQAVLAGTNFTFQVGANT 151
Score = 90.6 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 33/77 (42%)
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
G+ +R +++ + GR++DAD A+E+ LS Q QQ
Sbjct: 202 VVKQRATFGAAQTRFESVISNLQVASENQAAARGRIMDADFATETANLSRTQILQQAGTA 261
Query: 435 ALSIVNNSTARILSLFR 451
L+ N+ +LSL R
Sbjct: 262 MLAQANSLPQNVLSLLR 278
>gi|120598240|ref|YP_962814.1| flagellin domain-containing protein [Shewanella sp. W3-18-1]
gi|120558333|gb|ABM24260.1| flagellin domain protein [Shewanella sp. W3-18-1]
Length = 273
Score = 113 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 39/228 (17%), Positives = 75/228 (32%), Gaps = 3/228 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M A + L + L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSMKAQKNLNTSSSGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S IA+ M + +++ +++ D +IQ EI QL ++
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQAENGANSTDDLDAIQKEIDQLAEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I ++F + + + G I G T+
Sbjct: 124 TAIGDSTAFGNTKLMTGNFSAGKTFQVGHQEGEDITISVGTNNAGTLMVSTLAIATSGGR 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
ST + + ++ S +
Sbjct: 184 STALAAIDAAIKNIDNQRAALGAKQNRLAYNISNSANTQANVADAKSR 231
Score = 95.6 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/209 (13%), Positives = 55/209 (26%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + + + + A D+ + + +
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQAENGANSTDDLDAIQKEIDQLAEEI 123
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ A + + E + T +T A
Sbjct: 124 TAIGDSTAFGNTKLMTGNFSAGKTFQVGHQEGEDITISVGTNNAGTLMVSTLAIATSGGR 183
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ ID IK +G+ +R+ + V R+VD D A E++
Sbjct: 184 STALAAIDAAIKNIDNQRAALGAKQNRLAYNISNSANTQANVADAKSRIVDVDFAKETSV 243
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q QQ L+ N LSL
Sbjct: 244 MTKNQVLQQTGSAMLAQANQLPQVALSLL 272
>gi|27127341|dbj|BAC44988.1| flagellin [Campylobacter jejuni]
Length = 571
Score = 113 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 95/279 (34%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 64 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 124 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ K + ++
Sbjct: 184 EVQFTLKNYNGIDDFQFQKVVISTSVGTGLGALADEINKNADKTGVRATFTVETRGMAAV 243
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + G + + S
Sbjct: 244 RAGTTSDDFAINGVKIGQVEYKDGDANGALVAAINSVKD 282
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T IGS+ +++ + + I + + V+ + D D
Sbjct: 475 VTTLKGAMAVMDIAETATTNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVD 534
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ASES S Q A+S N +L L +
Sbjct: 535 FASESANFSKYNILAQSGSYAMSQANAVQQNVLRLLQ 571
>gi|170791559|gb|ACB38421.1| flagellin A [Aeromonas caviae]
Length = 297
Score = 113 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 66/155 (42%), Gaps = 3/155 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + + +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNMMNSTKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ +D ++Q E+ QL +++
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSDSDRDALQKEMDQLGAEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR 155
I+ ++F G L S A +
Sbjct: 125 RISTATTFAGTKLLDGSFSGSFQVGADANQTISFN 159
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 50/144 (34%)
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
+ D S + + + A + + + ++++
Sbjct: 153 NQTISFNLNQTDGFSISGIAAAATAAGTAALVVNTVFVSGSTAGGISISTQTKAQDILLA 212
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
D+ +K ++G++ +R+ + + V R+ DAD A+E+ ++
Sbjct: 213 TDSMLKVVDGKRAELGAVQNRLDSTIRNQANISENVSAARSRIRDADFATETANMTKQNI 272
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
QQ A L+ N LSL +
Sbjct: 273 LQQAASSILAQANQRPQSALSLLQ 296
>gi|254457301|ref|ZP_05070729.1| minor flagellin subunit FlaB [Campylobacterales bacterium GD 1]
gi|207086093|gb|EDZ63377.1| minor flagellin subunit FlaB [Campylobacterales bacterium GD 1]
Length = 279
Score = 113 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 62/163 (38%), Gaps = 3/163 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN AM+A + N L+ + +SSGLR++ AAD++A +IA + + + L
Sbjct: 5 INTNIGAMNAHRNATMNNIGLDKSLNSLSSGLRINKAADDSAGLAIANKLSAQSQGLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
G + A + + +++ ++ D I E+ L + +
Sbjct: 65 VRNSNDGIGLIQTADGALEEYGNILKRVRVLAVQASNDTQDATSRGYISQEVQALLGEAQ 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
DIA + FNG L GS S +
Sbjct: 125 DIATTTKFNGVKLLDNTGGSVAGSFTFHTGAYTTEVQTVTIGN 167
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 46/137 (33%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + + + + G + V+ + A + E + +D IK
Sbjct: 143 GSVAGSFTFHTGAYTTEVQTVTIGNAEVSATVAGGAAAVLVTTRGDAEASILLMDNGIKA 202
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G+ +++ I + + + ++ D D A+ES + Q
Sbjct: 203 VDGKRATLGAAQNKLESTVRNISVTQVNIAAAESQIRDVDFAAESANFAKHNILAQSGSY 262
Query: 435 ALSIVNNSTARILSLFR 451
A+S N +L L +
Sbjct: 263 AMSQANAVQQNVLRLLQ 279
>gi|170791527|gb|ACB38405.1| flagellin A [Aeromonas encheleia]
Length = 299
Score = 113 bits (281), Expect = 8e-23, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 74/203 (36%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + + +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNMMNSTKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQVNGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D +++Q E+ QL +++
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSAKDREALQKEVDQLGAEVN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ ++F G L + A + + ++ +
Sbjct: 125 RISSATTFAGTKLLDGSFSGTFQVGADANQTIGFSLSQADGFSISGIAAAAGTSITTATG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
+ I + Q
Sbjct: 185 AMLVSTIFVGGSAGGINIATQSA 207
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 47/121 (38%)
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
+ T+ + A + A + +++ +D+ + ++G++ +R+
Sbjct: 178 SITTATGAMLVSTIFVGGSAGGINIATQSAAQNVLAAVDSLLTVVDGKRAELGAVQNRLD 237
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + V R+ DAD A+E+ ++ QQ A L+ N LSL
Sbjct: 238 STIRNQSNISENVSAARSRIRDADFATETANMTKQNILQQAASSILAQANQRPQSALSLL 297
Query: 451 R 451
+
Sbjct: 298 Q 298
>gi|189339478|gb|ABD33730.2| flagellin [Bacillus thuringiensis serovar kyushuensis]
Length = 370
Score = 113 bits (281), Expect = 8e-23, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 74/162 (45%), Gaps = 3/162 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ LS
Sbjct: 8 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLSVA 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
++ G + + A + M+ +++ +++ + ++ E +QL+ Q+
Sbjct: 68 ANNTQDGMALIRTADSAMNSVSNILLRMRDIANQSANETNTDANKIALNKEFSQLKEQIT 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
IA + FN ++ L+ D ++ I + V
Sbjct: 128 YIAENTQFNDKDLLKGDNVIKIQTLDSDQASKQIDINLNAVT 169
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 37/89 (41%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
V ID + + +G+ +R+ + +K A+ ++ DADMA E + +
Sbjct: 282 TAVKQIDDALTMVASNRATLGATLNRLDFNVNNLKSQSSAMASAASQIEDADMAKEMSEM 341
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + + LS N + + L +
Sbjct: 342 TKFKILNEAGISMLSQANQTPQMVSKLLQ 370
>gi|121144335|gb|ABM47498.1| FllA55 [Escherichia coli]
Length = 608
Score = 113 bits (281), Expect = 8e-23, Method: Composition-based stats.
Identities = 52/373 (13%), Positives = 106/373 (28%), Gaps = 10/373 (2%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
++ + ++ +R+SSGLR++ A D+AA +IA S+ L+ +
Sbjct: 3 SLITQNNINKNQSSMSTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNAND 62
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGS 126
G S + +S+ + + I+ +D SIQ EI ++ ++ +
Sbjct: 63 GISVAQTTEGALSEINNNLQRIRELTVQSSTGTNSESDLNSIQDEIKSRLDEIDRVSGQT 122
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
FNG N L D A I + + + ++ T+
Sbjct: 123 QFNGVNVLAKDGSMKIQVGANDGETITIDLKKIDSSTLNLTGFNVNGKGSVSNTAATTDT 182
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
L S + K + A +F G
Sbjct: 183 LKLAGFTAGATPAADGTVT-------YSKDVDNAKAAASNVLAAAKNGDTISFAGNNGTG 235
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
+ + S + + + + + +
Sbjct: 236 ITATAGTYTYNKASDSYSFSATAASKDSLLSMLAPNAGDSFTASVSIGGKAQDVNVSKDG 295
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
T+ Y+D + + MV + T T ++ A++ ++
Sbjct: 296 TITTTDGKSLYLDQKGNLTQTGSGTTIAATWDNLMVNTDTTGVDATSGHSAATAVKTIIK 355
Query: 367 FIDTQIKCATAAA 379
D I A A
Sbjct: 356 VKDMTITSAGGNA 368
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 35/285 (12%), Positives = 70/285 (24%)
Query: 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKK 221
T + +S K + V+ A +
Sbjct: 324 ATWDNLMVNTDTTGVDATSGHSAATAVKTIIKVKDMTITSAGGNAQVATDKAYNDKYAAR 383
Query: 222 FKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR 281
T+ AA+ A A + + + S K A ++ +
Sbjct: 384 IVAGDTAAQADTAADTAEATATTTAVANTTADVSGVTISASQMASILKDKDFALNSGTTQ 443
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
+ T + D T + S
Sbjct: 444 YAVTGSTGAVTYDPDTDPAATGDIVSAYVDDAGTLTTDANKTVKYYAHTNGSVTNDSGSA 503
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ T+A + +D I +G++ +R+ +
Sbjct: 504 IYATEADKLTTEASTAAETTANPLKALDDAISQIDKFRSSLGAVQNRLDSAVTNLNNTTT 563
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+ + R+ DAD A+E + +S Q QQ L+ N ++
Sbjct: 564 NLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQV 608
>gi|118588725|ref|ZP_01546133.1| hypothetical protein SIAM614_18504 [Stappia aggregata IAM 12614]
gi|118438711|gb|EAV45344.1| hypothetical protein SIAM614_18504 [Stappia aggregata IAM 12614]
Length = 498
Score = 113 bits (281), Expect = 8e-23, Method: Composition-based stats.
Identities = 71/498 (14%), Positives = 160/498 (32%), Gaps = 48/498 (9%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I + + L+ + VQ+++++G++V+ A DN + A + S G L
Sbjct: 1 MRDITLSAAVRQNLLTLQSTADLMSGVQNKLATGMKVNSALDNPNSFFTASGLNSRAGDL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQ 118
S + D +G + A G+ D++ T K K + + K+ ++ L Q
Sbjct: 61 STLLDDMGQSLQTIKAADKGIQTITDLVETAKAKANQALQTQSQYERKTYAAQYNALLEQ 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV----------------- 161
+ D+A+ SS+ G+N L T + +
Sbjct: 121 IEDVAKDSSYKGKNLLAGAGNDLTTIFNEDATSKLTIEAVDYTDTALSTGLNLSDLAEGE 180
Query: 162 -----------------------------QITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
++ +++ T
Sbjct: 181 GATSSLQLRGGKTVITLQDAGGSALNTASTLSDSTLISTTQSLSFVDDTATNPSVLSGGV 240
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ V+ + ++ A T + + + ++ + G
Sbjct: 241 SSTASVQDLIDGLNAIAGVRAEFDNGTGELTIYSDEDFYIGGNGSATTSFAGTLVDATAF 300
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+ A + + + ++ Y + + G
Sbjct: 301 SSTTDALVDSGSFAVGDTLTLTDGNGYELGTFEVEADSTVDDLENFINDFNGVTADFDTG 360
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ + +E+ + + + + + + + ++ ++T +
Sbjct: 361 SGRITITSETDLSLTSDNSDFASSGFTTDTDGIVIEAISDSGFATDTNINRVIDRLNTSL 420
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A + G+ S + +++DF K + + +++G G L AD E L ALQT+QQLA
Sbjct: 421 SNLRSQASEFGTNLSTVEIRQDFTKTLINTLQEGAGLLTLADTNEEGANLLALQTRQQLA 480
Query: 433 VQALSIVNNSTARILSLF 450
+LS + + +LSLF
Sbjct: 481 STSLSFASQADQTVLSLF 498
>gi|224370746|ref|YP_002604910.1| putative flagellin [Desulfobacterium autotrophicum HRM2]
gi|223693463|gb|ACN16746.1| putative flagellin [Desulfobacterium autotrophicum HRM2]
Length = 792
Score = 113 bits (281), Expect = 8e-23, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 3/172 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I TN SA+SA ++ + L R+S+GLR++ AAD+A+ +IA +KS L
Sbjct: 3 LTINTNISALSAHMNMKKTDSALSASLGRLSTGLRINKAADDASGMAIADSLKSQGLGLG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQ 118
G + V A + +AI++++TIK K + G K IQ++I +L +
Sbjct: 63 QAIRNANDGINIVQTADGALDEAINIVNTIKTKSIQAAQDGQTFESRKIIQNDIDKLLEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL 170
+ +A +SFNG+ L + + + + S + T
Sbjct: 123 VDLLASSTSFNGKKLLSGEFTNKSFQVGASTRETVGISIGSAETTKTGHVTT 174
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 56/190 (29%)
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
T + + + T K T + + N
Sbjct: 603 TMAAGSIIASGSTIAKGTYLTNDITTSTGGTVKAGSTLEQDIATKGTNTLFNEMTVAKGT 662
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
S + + + + + + ++ D+ +K
Sbjct: 663 KLADTSVIANAGGGTASDISIEDSEVTRLSDIDVTSQEGAQIAIAVADSALKDYDKIRSD 722
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+GS +++ I + + V + D D A+ES S LQ Q A++ N+
Sbjct: 723 LGSTQNQLTSTISNISVTQINVNAAESSIRDVDFAAESQTFSKLQILAQSGAYAMAQANS 782
Query: 442 STARILSLFR 451
S+ ++SL +
Sbjct: 783 SSQTVMSLLQ 792
>gi|327478804|gb|AEA82114.1| flagellin domain-containing protein [Pseudomonas stutzeri DSM 4166]
Length = 301
Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats.
Identities = 51/296 (17%), Positives = 95/296 (32%), Gaps = 3/296 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN+S++ L N L Q R+ +GLR++ AAD+AA IA + + + +
Sbjct: 3 LSIHTNYSSLITQTNLSKTNNALGTNQQRLGTGLRINSAADDAAGLQIATRLNAQSRGMG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQ 118
+G S + A+ +++ D++ +K+ T D S+Q E QL S+
Sbjct: 63 VAMRNVGDSISLLQTAEGALNEMTDIVQRMKDLATQAANGTNSEADRDSLQEEYDQLGSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L +I + + + GEN D + TA+ G + T L
Sbjct: 123 LANIFKNTKYAGENLFTADGTAVTAAGKFGTTGGVDFQIGASKEETLTLDASTKVGELAT 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + + L GA + N T
Sbjct: 183 GLSGISSFFAATTPTSAGNEIAGTDGSAANGKITDLTDALDTIGALRAQFGANINRLNHT 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
+ + + S ++ S+ + + +
Sbjct: 243 NNNLANMKDNTEMAKGRIMDADFASESANMTKNSMLMQSGISMLKQAGQMPSMVMG 298
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 43/113 (38%)
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
T N A + A ++ + + A + G+ +R++ + +
Sbjct: 188 SSFFAATTPTSAGNEIAGTDGSAANGKITDLTDALDTIGALRAQFGANINRLNHTNNNLA 247
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
M+D E GR++DAD ASES ++ Q + L + ++ L
Sbjct: 248 NMKDNTEMAKGRIMDADFASESANMTKNSMLMQSGISMLKQAGQMPSMVMGLL 300
>gi|254457415|ref|ZP_05070843.1| minor flagellin subunit FlaB [Campylobacterales bacterium GD 1]
gi|207086207|gb|EDZ63491.1| minor flagellin subunit FlaB [Campylobacterales bacterium GD 1]
Length = 275
Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 3/181 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN AM+A + N L+ + +SSGLR++ AAD++A +IA + + + L
Sbjct: 5 INTNIGAMNAHRNATMNNVGLDKSLNSLSSGLRINKAADDSAGLAIANKLAAQSQGLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
G + A + + +++ ++ D I E+ L +
Sbjct: 65 IRNSNDGIGLIQTADGALEEYGNILKRVRVLAIQASNDTQDATSRGYISQEVVALLGEAN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
DIA + FNG N L G++ + + S T V ++
Sbjct: 125 DIATTTKFNGVNLLDGTGGTAGSFTFHTGAYSTEVQTVAIGSAQTAVLVTGGTAVTTRTA 184
Query: 181 T 181
Sbjct: 185 A 185
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 42/137 (30%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
T + E+ + A + A E +S +D I
Sbjct: 139 DGTGGTAGSFTFHTGAYSTEVQTVAIGSAQTAVLVTGGTAVTTRTAAEGTISNVDLAIVA 198
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G+ +++ I + V+ ++ D D A+ES + Q
Sbjct: 199 VDGQRATLGAAQNKLESTIRNISVTEVNVKSAESQIRDVDFAAESATFAKHNILAQSGSY 258
Query: 435 ALSIVNNSTARILSLFR 451
A+S N +L L +
Sbjct: 259 AMSQANAVQQNVLRLLQ 275
>gi|3290050|gb|AAC25650.1| flagellin A [Campylobacter jejuni]
Length = 572
Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 79/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADTLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + +
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGT 212
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 36/97 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T IGS+ +++ + I + + V+ ++ D D
Sbjct: 476 VTTLKGAMAVMDIAETATTNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVD 535
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A++ N+ +L L +
Sbjct: 536 FAAESANYSKANILAQSGSYAMAQANSVHQNVLRLLQ 572
>gi|254437513|ref|ZP_05051007.1| Bacterial flagellin N-terminus domain protein [Octadecabacter
antarcticus 307]
gi|198252959|gb|EDY77273.1| Bacterial flagellin N-terminus domain protein [Octadecabacter
antarcticus 307]
Length = 383
Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN +A+ A+ +N ++E +R+S+G R++ A+D+AA +IA + S+ +
Sbjct: 3 LSIATNTAALMAAASATSVNKDMETSMERLSTGKRINSASDDAAGVAIASRLSSEIRGTN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G + +D A+ + +++ ++ +D ++Q+E L ++
Sbjct: 63 QAIRNAQDGQALIDTAEGAHKEVENILQRMRELAVQSSNDTNDSSDRTNLQAEFKALSTE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAK 147
+ IA +++ G++ L G+
Sbjct: 123 IDRIAGATTWAGQDLLSGIGGTDADGAFN 151
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 46/98 (46%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + +D I ++GS S+R+ + + +E G GR+ DAD
Sbjct: 286 ISTRDLATAAIDLMDAAIATVNTQRAELGSTSNRLDNTVSNLTSISIQLEGGRGRIEDAD 345
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
A+EST L+ Q QQ + L+ N S +LSL +G
Sbjct: 346 FAAESTSLAKSQILQQASTAMLAQANASKQNVLSLLQG 383
>gi|189164121|gb|ABU96043.2| flagellin [Bacillus thuringiensis serovar morrisoni]
gi|189164124|gb|ABU96044.2| flagellin [Bacillus thuringiensis serovar morrisoni]
Length = 373
Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 78/198 (39%), Gaps = 3/198 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + ++ +++ +++ G + K++ E + L+ Q+
Sbjct: 63 ANNTQDGMSLIRTADSALNSVSNILLRMRDIANQSANGTNTGDNQKALDKEFSALKEQID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L D S + + + N T
Sbjct: 123 YISKNTEFNDKKLLNGDNKSIAIQTLDNADTAKQININLADSSTKALNIDTLSIAGTTDK 182
Query: 181 TDGTERYGLLDRNHKIKV 198
T L D +
Sbjct: 183 TITITAKDLTDNKATLDA 200
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 46/134 (34%)
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
D + + + + + T D + ID ++ +
Sbjct: 240 SDKAIEGITDKMTAFDGTHTAAAAIGTAYTEPTAGDITKSAPNASGAIKSIDAALETIAS 299
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G+ +R+ + +K ++ ++ DADMA E + ++ + + + LS
Sbjct: 300 NRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGISMLS 359
Query: 438 IVNNSTARILSLFR 451
N + + L +
Sbjct: 360 QANQTPQMVSKLLQ 373
>gi|114054862|gb|ABI50031.1| FlaA [Clostridium botulinum]
Length = 263
Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N +AM+A +++ N +++SSGLR++ A D+AA +I++ M+ L+ S
Sbjct: 1 HNLNAMNAXRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQASR 60
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDI 122
S + A+ +++ ++ ++ D +++Q E+ +LQS++ I
Sbjct: 61 NSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEINRI 120
Query: 123 ARGSSFNGENWLRTDLGSSTASIA 146
+ + FN ++ + + ++
Sbjct: 121 SSQTQFNTKSLINGAVSKXADAMT 144
Score = 77.5 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 29/79 (36%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
N + + + ++ ID I + K+G+ +R+ + + ++ R
Sbjct: 170 DNIKLDDTAANVTKQIATIDNAINSVSKERAKLGANQNRLEHTIANLDNSAENLQAAESR 229
Query: 410 LVDADMASESTRLSALQTQ 428
+ D DMA E +
Sbjct: 230 IRDVDMAKEMMNFTKTNIL 248
>gi|85710176|ref|ZP_01041241.1| flagellin [Erythrobacter sp. NAP1]
gi|85688886|gb|EAQ28890.1| flagellin [Erythrobacter sp. NAP1]
Length = 272
Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats.
Identities = 46/209 (22%), Positives = 80/209 (38%), Gaps = 3/209 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I TN SA+ A N L +R+S+G R++ AAD+AA SIA SD AL
Sbjct: 1 MSVINTNISALKAQNASMRANDMLSTSMERLSTGQRINGAADDAAGLSIATGFTSDIRAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ G + A+ + + +++ I+ + E+ +L+
Sbjct: 61 NQGIRNANDGIALAQTAEGSLDEVTNMLQRIRELAVQSSSGTYDADARGFMNQEVDELRG 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ DI + FNG T GS + G + + + T I +
Sbjct: 121 QITDILSNTEFNGVTLFSTTSGSDVTVDIQIDAGRNVTLTSTAIDGTNISASGLNVSDTT 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+ T T G+L + + ++
Sbjct: 181 QAGTTITNVDGILSDVNSARSSLGAGQNR 209
Score = 90.2 bits (221), Expect = 7e-16, Method: Composition-based stats.
Identities = 33/272 (12%), Positives = 73/272 (26%)
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ L + +L + + +
Sbjct: 1 MSVINTNISALKAQNASMRANDMLSTSMERLSTGQRINGAADDAAGLSIATGFTSDIRAL 60
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+Q A + L + +A ++ + +
Sbjct: 61 NQGIRNANDGIALAQTAEGSLDEVTNMLQRIRELAVQSSSGTYDADARGFMNQEVDELRG 120
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
S G T + + S + + S A+ ++
Sbjct: 121 QITDILSNTEFNGVTLFSTTSGSDVTVDIQIDAGRNVTLTSTAIDGTNISASGLNVSDTT 180
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ +D + +A +G+ +R+ + + + R+ DAD +SE+
Sbjct: 181 QAGTTITNVDGILSDVNSARSSLGAGQNRLESAINNLTTTATNLTDARSRIQDADYSSET 240
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
T L+ Q Q + L+ N S +LSL R
Sbjct: 241 TALAKAQILGQASTAMLAQANQSQQNVLSLLR 272
>gi|189339470|gb|ABD33727.2| flagellin [Bacillus thuringiensis serovar nigeriensis]
Length = 377
Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 78/202 (38%), Gaps = 3/202 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + ++ +++ +++ + K++ E + L+ Q+
Sbjct: 63 ANNTQDGMSLIRTADSALNSVSNILLRMRDIANQSANGTNTSDNQKALDKEFSALKEQID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L D S + + + N TT +
Sbjct: 123 YISKNTEFNDKKLLNGDNKSIAIQTLDNADTTKQININLADSSTTALNIDKLSIEGTGNK 182
Query: 181 TDGTERYGLLDRNHKIKVEPQV 202
T + I
Sbjct: 183 TITLTAADIAKDKANIDAVGTA 204
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/331 (10%), Positives = 90/331 (27%)
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + S + + + +
Sbjct: 47 AIATRMRARESGLGVAANNTQDGMSLIRTADSALNSVSNILLRMRDIANQSANGTNTSDN 106
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
++ + + + + + +I+ + A T+ +
Sbjct: 107 QKALDKEFSALKEQIDYISKNTEFNDKKLLNGDNKSIAIQTLDNADTTKQININLADSST 166
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A I + + T + + K+ A + A NS +D
Sbjct: 167 TALNIDKLSIEGTGNKTITLTAADIAKDKANIDAVGTAKTALAGLTGTPAAAAINSAVAD 226
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ K + + + + + + + + T A D
Sbjct: 227 FKTAFAKADKNLMSDAQIKAVTDAITAFEADATPDLTKAKAIGTAYTAPAAGDITKASPN 286
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
E + ID + + +G+ +R+ + +K ++ ++ DADMA E +
Sbjct: 287 ASEAIKSIDAALDTIASNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMS 346
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + + + LS N + + L +
Sbjct: 347 EMTKFKILNEAGISMLSQANQTPQMVSKLLQ 377
>gi|57238714|ref|YP_179513.1| flagellin [Campylobacter jejuni RM1221]
gi|57167518|gb|AAW36297.1| flagellin subunit protein FlaA [Campylobacter jejuni RM1221]
Length = 573
Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats.
Identities = 46/279 (16%), Positives = 92/279 (32%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + +
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRITSGG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ K + ++
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGTGLGALADEINKNADKTGVRATFTVETRGMAAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + G + S
Sbjct: 245 RAGTTSNDFAINGVTIGQVAYEDGDGNGALVAAINSVKD 283
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + I + + V+ ++ D D
Sbjct: 477 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVD 536
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A++ N+ +L L +
Sbjct: 537 FAAESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ 573
>gi|87119667|ref|ZP_01075564.1| flagellin [Marinomonas sp. MED121]
gi|86165143|gb|EAQ66411.1| flagellin [Marinomonas sp. MED121]
Length = 296
Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 75/207 (36%), Gaps = 3/207 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +++ A ++L L+ +R++SG R++ AAD+AA I+ + S L+
Sbjct: 5 VNTNTTSLYAQRQLGTSGDILDKSFERLASGKRINSAADDAAGLQISNRLTSQTNGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
G S A+ M + +++ ++ D +IQ EI QL +++
Sbjct: 65 MRNANDGISLAQTAEGAMDETTNMLQRMRTLAIQSANGSNTDEDRLAIQQEIAQLATEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A ++F G+N L + + + + ++D + S
Sbjct: 125 RVADTTTFGGQNLLDGTYATGSFQVGADASQTISFSLASGGTNNSVDISAAGGFNVQGLS 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDID 207
T V
Sbjct: 185 TAAGTTIITSLTASVSSVANAQSMIEM 211
Score = 93.3 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 30/235 (12%), Positives = 69/235 (29%)
Query: 218 STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASA 277
+ A A + + + + NT + +
Sbjct: 62 NQAMRNANDGISLAQTAEGAMDETTNMLQRMRTLAIQSANGSNTDEDRLAIQQEIAQLAT 121
Query: 278 TYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
R+ ++ + + + + A + +
Sbjct: 122 EIDRVADTTTFGGQNLLDGTYATGSFQVGADASQTISFSLASGGTNNSVDISAAGGFNVQ 181
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
G S + T + + + M+ + + I ++G++ +R +
Sbjct: 182 GLSTAAGTTIITSLTASVSSVANAQSMIEMLGSMIAAVDTKRAELGAVQNRFSSTISNLG 241
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+++ VE R+ DAD A E+ +++ Q QQ + LS N +SL G
Sbjct: 242 NIKENVEGARSRIRDADFAEETATMTSNQILQQASTTILSQANQRPQSAMSLLGG 296
>gi|114054899|gb|ABI50049.1| FlaA [Clostridium botulinum]
Length = 248
Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 65/170 (38%), Gaps = 3/170 (1%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ + +++SSGLR++ A D+AA +I++ M+ L S S +
Sbjct: 1 RNMSANTVQSGKSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQASRNSQDSISLI 60
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGE 131
A+ +++ ++ ++ G D +I++EIT+L +++ I++ + FN +
Sbjct: 61 QTAEGALTETHSILQRMRELAVQGANDTNVTADRAAIKTEITELNNEINRISQQTEFNTQ 120
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
L I + + T + + +
Sbjct: 121 KLLSGGFKDKNFQIGANKAQTIKLTIGDMSAKTLGVSGVSVSDASKATDS 170
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 32/91 (35%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 145 TIGDMSAKTLGVSGVSVSDASKATDSIATIDKALGTVSTERAKLGANQNRLEHTINNLNT 204
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ ++ R+ D DMA E S
Sbjct: 205 SSENLQAAESRVRDVDMAKEMMAFSKNNILN 235
>gi|118588724|ref|ZP_01546132.1| hypothetical protein SIAM614_18499 [Stappia aggregata IAM 12614]
gi|118438710|gb|EAV45343.1| hypothetical protein SIAM614_18499 [Stappia aggregata IAM 12614]
Length = 498
Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats.
Identities = 71/498 (14%), Positives = 152/498 (30%), Gaps = 48/498 (9%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I + + + L+ + VQ+++++G +V+ A DN + A + S L
Sbjct: 1 MGDITLSSAVRANLNTLQSTAQFMSDVQNKLATGKKVNSALDNPNSFFTASGLTSRANDL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQ 118
S + D +G + + A G+S ++ + K K + + K ++ L +Q
Sbjct: 61 STLLDDMGQSTQTLKAADQGISSITKLVESAKAKANQALQTQSQYERKQFAAQYNDLLTQ 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV----------------- 161
+ D+A+ S + G+N L + + +
Sbjct: 121 IEDLAKDSGYKGKNLLAGEGNDLRTIFNEDSTSKLDIEAVDYTDTSLSTGLNLSDLAEGE 180
Query: 162 -----------------------------QITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
++ +++ T
Sbjct: 181 GASASLQLQGGKTVITLQDSGGSALNTSSTLSDSTLISTTQSLSFVDDTATNPAVLSGGV 240
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ V+ V +S A T + + + ++ + G
Sbjct: 241 SSTASVQDLVDSLNAISGVRAEFDNGTGELTIYSDEDFYIGGNGSATTSFAGTLVDATAF 300
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+ + S + ++ Y + S G
Sbjct: 301 SSTTDTLINSGSFSVGDTLTLTDGNGYELGSFEVEDDSTVDDLENFINDFNGVSADFDTG 360
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ + +E+ + + + T + + + V ++T +
Sbjct: 361 SGRITITSETDLSLTSDNADFASSGFTANTTGIGISAISDSGFATDTDINRTVDRLNTAL 420
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A G+ S + ++DF K + + +E+G G+L AD E L ALQT+Q LA
Sbjct: 421 SNLRTQASSFGTNLSIVENRQDFTKNLINTLEEGAGKLTLADTNEEGANLLALQTRQSLA 480
Query: 433 VQALSIVNNSTARILSLF 450
+LS + +L LF
Sbjct: 481 STSLSFAAQADQNVLRLF 498
>gi|108809044|ref|YP_652960.1| putative flagellin [Yersinia pestis Antiqua]
gi|167398675|ref|ZP_02304199.1| lateral flagellin [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|108780957|gb|ABG15015.1| putative flagellin [Yersinia pestis Antiqua]
gi|167051179|gb|EDR62587.1| lateral flagellin [Yersinia pestis biovar Antiqua str. UG05-0454]
Length = 398
Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats.
Identities = 60/454 (13%), Positives = 117/454 (25%), Gaps = 61/454 (13%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN SA +A L + R+S+G R++ ADNAA I M+ +
Sbjct: 3 LSIHTNASAKTAINSLSNEGLANAKSSQRLSTGFRINSPADNAAGLQITNRMEKFLNSAG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
I + + IA G+++++ ++ +K T D ++IQ E ++L +
Sbjct: 63 QAKQNIQESIAMLQIADGGLAESVKTLNAMKKLATQAANDTNSAADREAIQKEFSELGKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L++ + +N E +S + + + L
Sbjct: 123 LQNALNNTEYNSEKLFADGGKMRKELNFQSGTDAESSLKLDLNSVIAELTESVTKPGLKA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+S E L K + +T K A+ + T
Sbjct: 183 NSGGTAEEKELARLEGLAKDAKSTAATTKSAETTLLVDDATGKGGNASIDIIIPAHKDTT 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ + + +
Sbjct: 243 GKDVAEKKIASGTAITPANITSMADAKAYWDKQEIETPKAVNEYVVKHSADSGVMNMQLA 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
Sbjct: 303 DKDLAMK---------------------------------------------------AD 311
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+ +++ A ++ S S+ + M + +G + D D A E
Sbjct: 312 KKLSDVIDAYGAFRATLGANQNRLQSSSNNLD-------NMISNTAQALGSIKDTDFADE 364
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + Q +V L N +T I +L +G
Sbjct: 365 MKNHAQSEMLMQSSVMMLKKANAATQLISTLLQG 398
>gi|303240164|ref|ZP_07326684.1| flagellin domain protein [Acetivibrio cellulolyticus CD2]
gi|302592255|gb|EFL61983.1| flagellin domain protein [Acetivibrio cellulolyticus CD2]
Length = 271
Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/253 (14%), Positives = 83/253 (32%), Gaps = 3/253 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A +A ++L+ + E +++SSG R++ A D+AA SI++ M+ L
Sbjct: 3 INNNMMAYNAHRQLKTNSAAQEKSLEKLSSGYRINKAGDDAAGLSISEKMRGQIRGLQQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ +S+ ++ ++ D +I++E+ L ++
Sbjct: 63 SRNAQDGISLIQTAEGALSETHSILQRMRELSVQASNDTNVTADRDAIETELDDLSGEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ + FN + L A + + ++ +
Sbjct: 123 RIAQKTQFNTQTLLDGTFSGVVQIGANAGENLSFSIGSMDADALSVVDAAIAVDTTAAAQ 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + ++ + + ++ + T + + A
Sbjct: 183 SSVSIINTAINTVSTQRAKLGAKQNRLEHTINNLDTAAENLQASESRIRDVDMAQEMMSY 242
Query: 241 QAKGIATIPVPLP 253
I
Sbjct: 243 TKNNILNQAATAM 255
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 56/176 (31%)
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
A+ +D T + ++ + T
Sbjct: 96 QASNDTNVTADRDAIETELDDLSGEITRIAQKTQFNTQTLLDGTFSGVVQIGANAGENLS 155
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
S SM ++ A + A + VS I+T I + K+G+ +R+ +
Sbjct: 156 FSIGSMDADALSVVDAAIAVDTTAAAQSSVSIINTAINTVSTQRAKLGAKQNRLEHTINN 215
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + ++ R+ D DMA E + Q A L+ N + +L L +
Sbjct: 216 LDTAAENLQASESRIRDVDMAQEMMSYTKNNILNQAATAMLAQANQAPQGVLQLLQ 271
>gi|332139407|ref|YP_004425147.1| Flagellin [Pantoea ananatis LMG 20103]
gi|326698720|gb|AEA04444.1| Flagellin [Pantoea ananatis LMG 20103]
Length = 309
Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNTLSLVTQNNLSKSQSSLGTAIERLSSGLRINSAKDDAAGEAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ +++ + + +++ D SIQ+E+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALTEVNNNLQRVRDLTVQAQNSSNSASDIDSIQAEVNQRMQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTAS 144
++ + + + FNG L T GSST +
Sbjct: 121 EIDRVTKQTDFNGIKVLNTGSGSSTYN 147
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 35/87 (40%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ ID IK +G+ +R + + R+ DAD A+E + +S
Sbjct: 223 LADIDKAIKAVDNQRSLLGASQNRFESTISNLNNTVTNLTAARSRIQDADYATEVSNMSR 282
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ L+ N +LSL R
Sbjct: 283 AQILQQAGSSVLAQANQVPQTMLSLLR 309
>gi|209171241|gb|ACI42866.1| FliC [Pectobacterium carotovorum subsp. carotovorum]
Length = 261
Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 37/87 (42%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ ID I + +G+I +R + + + R+ DAD+A+E + +S
Sbjct: 175 LEQIDKAIATVDSQRSGLGAIQNRFESTITNLNSTVNNLTSARSRIEDADVATEVSNMSK 234
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ LS N +LSL R
Sbjct: 235 NQILQQAGTSVLSQANQVPQTVLSLLR 261
Score = 60.1 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 14/128 (10%), Positives = 32/128 (25%), Gaps = 3/128 (2%)
Query: 57 NGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEIT 113
L+ S G S + +++ + + I+ SI +E+
Sbjct: 15 IKGLTQASRNANDGISIAQTTEGALNEINNNLQRIRELTVQANNGSNSGDDLVSINNEVV 74
Query: 114 QLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE 173
++ ++ + FNG L ++ A I
Sbjct: 75 DRLKEINRVSNQTQFNGIKVLDSNQTLGIQVGANDGEKIDISLKQTDTTTLFTGNARLTG 134
Query: 174 TVLLDSST 181
+
Sbjct: 135 ITEASTGA 142
>gi|254456763|ref|ZP_05070191.1| flagellin B [Campylobacterales bacterium GD 1]
gi|207085555|gb|EDZ62839.1| flagellin B [Campylobacterales bacterium GD 1]
Length = 275
Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 71/181 (39%), Gaps = 3/181 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN AM+A + N L+ + +SSGLR++ AAD++A +IA + + + L
Sbjct: 5 INTNIGAMNAHRNATMNNIGLDKSLNSLSSGLRINKAADDSAGLAIANKLSAQSQGLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
G + A + + +++ ++ D IQ E+T L ++
Sbjct: 65 VRNSNDGIGLIQTADGALEEYGNILKRVRVLAVQAANDTQDTTSRGYIQQEVTALLAEAD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
DIA + FNG N L GS S + T I + +V +
Sbjct: 125 DIATTTKFNGVNLLDNTGGSVAGSFTFHTGAYTTEVQTVTIGDTQIAVMVSASSVSTRAD 184
Query: 181 T 181
Sbjct: 185 A 185
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 45/137 (32%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + + ++ I + + + + E V+ +D I
Sbjct: 139 DNTGGSVAGSFTFHTGAYTTEVQTVTIGDTQIAVMVSASSVSTRADAELAVAGMDVSIGR 198
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
A +G+ +++ I + + + ++ D D A+ES + Q
Sbjct: 199 IDAKRATLGAAQNKLESTVRNISVTQVNIAAAESQIRDVDFAAESANFAKHNILAQSGSY 258
Query: 435 ALSIVNNSTARILSLFR 451
A+S N +L L +
Sbjct: 259 AMSQANAVQQNVLRLLQ 275
>gi|14278886|dbj|BAB58979.1| flagellin [Bacillus subtilis]
Length = 251
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/249 (15%), Positives = 82/249 (32%), Gaps = 6/249 (2%)
Query: 9 SAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
+A++ +L N + +++SSGLR++ A D+AA +I++ M+ L S
Sbjct: 1 AALNTLNRLGSDNGAAQKNMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLEMASKNSQ 60
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK----SIQSEITQLQSQLRDIAR 124
G S + A+ +++ ++ ++ GT +I+ E+ L ++ I+
Sbjct: 61 DGISLIQTAEGALTETHAILQRMRELTVQAGNTGTQQAGDLGAIKDEMDALIEEIDGISN 120
Query: 125 GSSFNGENWLRTDLGS--STASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ FNG+ L + T I + + LD + D
Sbjct: 121 RTEFNGKKLLDGTNSTDGFTFQIGANAGQQLNVKIDSMSSTALGVNALDVTDFAATAFDD 180
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + + + S + A + + A +
Sbjct: 181 QLKSIDTAINTVSTQRAKLGAVQNRLEHTINNLGASGENLTAAESRIRDVDMAKEMSEFT 240
Query: 243 KGIATIPVP 251
K
Sbjct: 241 KNNILSQAS 249
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 32/78 (41%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
A ++ + IDT I + K+G++ +R+ + + + + R+ D DMA
Sbjct: 174 AATAFDDQLKSIDTAINTVSTQRAKLGAVQNRLEHTINNLGASGENLTAAESRIRDVDMA 233
Query: 417 SESTRLSALQTQQQLAVQ 434
E + + Q +
Sbjct: 234 KEMSEFTKNNILSQASQA 251
>gi|169950571|gb|ACB05818.1| flagellin [Clostridium botulinum]
Length = 274
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + A +++ N +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNLNY-DAHRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S S + A+ +++ ++ ++ D +++Q E+ +LQS++
Sbjct: 62 SRNSQDAISLIQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEIN 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA + FN ++ + + ++
Sbjct: 122 RIASQTQFNTKSLINGAVSEDAKAMT 147
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 49/133 (36%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D ++ T + + I + + N + + + ++ ID+ I +
Sbjct: 142 DAKAMTFQIGVNSGQTIKLTIGSMDAKTLKVDNIKLDDTAANITKQIATIDSAINSVSKE 201
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 202 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 261
Query: 439 VNNSTARILSLFR 451
N + +L L R
Sbjct: 262 ANQAPQGVLQLLR 274
>gi|87312157|ref|ZP_01094261.1| flagellin [Blastopirellula marina DSM 3645]
gi|87285131|gb|EAQ77061.1| flagellin [Blastopirellula marina DSM 3645]
Length = 1190
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 4/181 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN S++ A + L N +L V R+S+GLR++ D+ A ++ ++SD ++
Sbjct: 1 MTRINTNVSSLVAQKNLGRSNADLNVTLTRLSTGLRINSGKDDPAGLIASESLRSDITSV 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS----KSIQSEITQLQ 116
+ + A + + + +++ I+ I+ G S + Q +I
Sbjct: 61 EKAITNSERANQLIATADSALGQVSSLLNDIRGLISEAANTGALSDEQVAANQLQIDSSL 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+ IA+ +SF G+ L +L T ++ +S I D T+I +
Sbjct: 121 EAIDRIAQVTSFQGKRLLDGNLDFITQNVNRSSIAGLQIDQANFGTQTSIGVAVKVVHQA 180
Query: 177 L 177
Sbjct: 181 T 181
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSR-IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+D I T+ G++G+ + + + + + DAD A+ES RL
Sbjct: 1101 AAKVVDEVISVVTSLRGRLGAFQKTTLDSNIYSLNDTLANLTEAESSIRDADFAAESARL 1160
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ Q Q L I N + +LSL +G
Sbjct: 1161 TRAQILVQAGTNTLGIANQNPQNVLSLLQG 1190
>gi|45659267|ref|YP_003353.1| flagellar hook-associated protein FlgL [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
gi|45602513|gb|AAS71990.1| flagellar hook-associated protein 2 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 422
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 39/433 (9%), Positives = 103/433 (23%), Gaps = 29/433 (6%)
Query: 1 MTSILTNHSAMSAS-QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M I TN ++ L N++ Q+++S+G R+ +D + +S
Sbjct: 1 MMRI-TNMMQNNSLIHNLNRHQLNMDETQNQLSTGQRIRLPSDEPGRATNQMFFRSRLNE 59
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQL 119
L I G+S++ + + + + + ++
Sbjct: 60 LETFQRNIDDGNSRLQQIDGELDRIGSLFQRARVLAVQASNGIYQGDKGFELEVAVGKEI 119
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+I R T + + I +Q + D
Sbjct: 120 DEILRALVDIANTRDATGRPLFGGHVIERPPFEPIESKIKGLQGIELKNQYIGVEYRGDI 179
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
E I + +
Sbjct: 180 GEQLREIEKGEYVPVTIPGN---------------------------KVFWGTNMSITSK 212
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
G S + + + + + + + +S
Sbjct: 213 VDNSGYVVSSDQKFKIDGVEIHVSAGDTIDDIIDKINNSPLEVKANKLAQDNISLSSTAP 272
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + +T+ +G S+ + I + +++
Sbjct: 273 HQIWMEDVEGGTILRDIGLVDSATSEPPNNYSKSATVTGLSVFDVMIQFRNDLIQKDQER 332
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ +D ++ +G+ +R+ + + + + + + D
Sbjct: 333 ISGRDLQDLDLAMENILRYRAIVGARMNRMEEHAQRVDFDKSYMTELLSKNEGIDFPETI 392
Query: 420 TRLSALQTQQQLA 432
+ L+T Q A
Sbjct: 393 MNMKWLETVHQYA 405
>gi|126176144|ref|YP_001052293.1| flagellin domain-containing protein [Shewanella baltica OS155]
gi|125999349|gb|ABN63424.1| flagellin domain protein [Shewanella baltica OS155]
Length = 272
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/227 (16%), Positives = 78/227 (34%), Gaps = 3/227 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M + TN++++ A + N L +R+S+GLR++ A+D+AA IA M ++ +
Sbjct: 1 MLGVHTNYASIVAQGAVNKSNNLLTNAMERLSTGLRINSASDDAAGLQIANRMSANVKGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQS 117
S I +S + A + + + + K T D K++ E QL +
Sbjct: 61 ETASRNISDATSMLQTADGALEELTTIANRQKELATQASNGVNSTADLKALDDEFKQLNA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ I +++ G N + IGS +
Sbjct: 121 EITRIVENTTYAGNNLFKDATDGVLVKGVTFQIGSDAAEKMSVTLGAIDKTVAGDLLTSA 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
++T L + + + G+++
Sbjct: 181 AANTAIGAVDTFLAKVGTERSTLGANINRLGHTAANLGSVTENTKAA 227
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 39/95 (41%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
A + +DT + +G+ +R+ + + + + GR++DAD A
Sbjct: 178 TSAAANTAIGAVDTFLAKVGTERSTLGANINRLGHTAANLGSVTENTKAAAGRIMDADFA 237
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ES ++ Q Q LS N +T ++ L R
Sbjct: 238 VESANMTRNQLLVQAGTTVLSSANQNTGLVMGLLR 272
>gi|226314920|ref|YP_002774816.1| flagellin [Brevibacillus brevis NBRC 100599]
gi|226097870|dbj|BAH46312.1| flagellin [Brevibacillus brevis NBRC 100599]
Length = 274
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 4/142 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA + ++L NL +++SSG R++ AAD+AA SI++ M++ +
Sbjct: 3 IQHNMSAQNTHRQLGVNTGNLSKNVEKLSSGYRINRAADDAAGLSISERMRAQVRGMEQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE----RGTDSKSIQSEITQLQSQL 119
S G S + A+ + +++ IK T D IQ E+++L ++
Sbjct: 63 SRNSQDGISLIQTAEGALQTVNNMLVRIKELATQSANGTYTDTEDRARIQEEVSELSKEV 122
Query: 120 RDIARGSSFNGENWLRTDLGSS 141
+I + FNG + L + +
Sbjct: 123 DNIKDNTKFNGISLLNGNGSKN 144
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 38/95 (40%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + + ++ QI +AA +G+ +R+ + + + + + R+ D DMA
Sbjct: 180 TQSGAKSALGDVEAQINKVSAARSYLGANQNRLENTINNLNITSENLTAAESRIRDVDMA 239
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + Q + L+ N +L L R
Sbjct: 240 KEQMAFTKNNILTQASQAMLAQANQLPQGVLQLLR 274
>gi|113911631|gb|ABI48297.1| Fla1 flagellin [Roseburia hominis]
Length = 270
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 41/262 (15%), Positives = 93/262 (35%), Gaps = 3/262 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N +AM+A+++L +++SSG +++ AAD+AA +I++ M+S L+
Sbjct: 2 VVQHNLTAMNANRQLGITTGAQAKSSEKLSSGYKINRAADDAAGLTISEKMRSQVRGLNK 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
SD G S + +A+ +S+ ++ + T +D ++Q EI QL S++
Sbjct: 62 ASDNAQDGVSLIQVAEGALSETHSILQRMNELATQAANDTNTTSDRTAVQQEINQLASEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FN N + + S + + D + L +
Sbjct: 122 TRIASTTQFNTMNLIDGNFTSKKLQVGSLCGQAITIDISDMSATGLGVSGLVVSSFSAAG 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + ++ ++ + + +
Sbjct: 182 KAMSAAQDAISYVSSMRSKLGALQNRLEHTISHLDNISEHTSSAESRIRDTDMAEEMVEY 241
Query: 240 DQAKGIATIPVPLPAAPAAPNT 261
+ +A + A
Sbjct: 242 SKNNILAQAGQSMLAQANQSTQ 263
Score = 98.3 bits (242), Expect = 3e-18, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 38/97 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ A + +S I ++ K+G++ +R+ + + + R+ D D
Sbjct: 174 VSSFSAAGKAMSAAQDAISYVSSMRSKLGALQNRLEHTISHLDNISEHTSSAESRIRDTD 233
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E S Q L+ N ST +LSL +
Sbjct: 234 MAEEMVEYSKNNILAQAGQSMLAQANQSTQGVLSLLQ 270
>gi|48224|emb|CAA45382.1| flaB3 [Treponema pallidum]
Length = 285
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM A ++ + +++SSG R++ A D+A+ ++++ M+S L+
Sbjct: 3 INHNMSAMFAQRQGGINGLAIAKNIEKLSSGYRINRAGDDASGLAVSEKMRSQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
I G S + + +++ +++ ++ D IQ E++QL ++
Sbjct: 63 GQNIQNGISFIQATEGYLAETTEIVQRLRELAIQAANGIYSAEDRMQIQVEVSQLVDEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTA 143
IA + FNG N L +A
Sbjct: 123 RIASQAQFNGMNLLTGRFSRESA 145
Score = 97.1 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 48/132 (36%)
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + + + S + T + + + +++ +D+ +K
Sbjct: 154 GANMDQNEKIFINTMTASALGFFSDEGTDGSRSISIATVDGANKVIGTLDSALKEINKQR 213
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G+ +R I + + ++ R+ DAD+A E + Q +Q + L+
Sbjct: 214 ADLGAYQNRFETAYQGIAIAAENLQAAESRIRDADLAHEMVDYTKNQILEQSTMAMLAQA 273
Query: 440 NNSTARILSLFR 451
N +L L +
Sbjct: 274 NTQPQAVLRLMQ 285
>gi|218885890|ref|YP_002435211.1| flagellin domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756844|gb|ACL07743.1| flagellin domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 295
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 46/276 (16%), Positives = 85/276 (30%), Gaps = 3/276 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N AM+A+ L L R+SSGLRV AAD+AA +I ++M++D +L+
Sbjct: 3 LVINHNLMAMNATNNLSLSYGKLATSVRRLSSGLRVGTAADDAAGLAIRELMRADIASLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ S + A + + + +K I SE + S+
Sbjct: 63 QGARNANDAISLIQTADGALGVIDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG + L L + G YY+
Sbjct: 123 ITRIANSTDFNGVHLLNGHLSGAHDGSGIEATGKLKVHFGSANDCAEDYYYIKIGNATAS 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ G + ++ + Q + + + I L +
Sbjct: 183 ALGVGAQAADGKGKSISTQSAAQAALEGLTNAIISKDKIRASLGALQNRLENTISNLQIQ 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ + + + + S+S
Sbjct: 243 AENLQAAESRISDVDVSMEMTEFVRQQILSQSAVAM 278
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 62/199 (31%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
L A TS A A+ I + + + S +
Sbjct: 95 LAEQAATGTYTSDQRLIIDSEYQAMASEITRIANSTDFNGVHLLNGHLSGAHDGSGIEAT 154
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
G + + + + + + ++ + + + A + + +
Sbjct: 155 GKLKVHFGSANDCAEDYYYIKIGNATASALGVGAQAADGKGKSISTQSAAQAALEGLTNA 214
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I +G++ +R+ +++ + ++ R+ D D++ E T Q Q
Sbjct: 215 IISKDKIRASLGALQNRLENTISNLQIQAENLQAAESRISDVDVSMEMTEFVRQQILSQS 274
Query: 432 AVQALSIVNNSTARILSLF 450
AV LS N+ L+L
Sbjct: 275 AVAMLSQANSLPRLALNLL 293
>gi|310659607|ref|YP_003937328.1| hag [Clostridium sticklandii DSM 519]
gi|308826385|emb|CBH22423.1| Hag [Clostridium sticklandii]
Length = 288
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 76/173 (43%), Gaps = 3/173 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A+++ + L + +++SSG +++ A+D+AA +I++ M + L
Sbjct: 3 INTNIAALNSHRMLERSSMASARNLEKLSSGTKINRASDDAAGLAISEKMNAQIRGLKMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
S G S + A+ +++ ++ ++ +I EI QL ++
Sbjct: 63 SRNSLDGISLIQTAEGALNEVHAMLQRMRELAVQAANDTNQNVDRDAIADEIDQLIQEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE 173
I + FNG N +L ++ ++ + + I++ Q+ ID Y
Sbjct: 123 RIGNNTEFNGINLFNGNLSITSTAVPFTGMQVLIQNGANANQMVAIDLYKMNA 175
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 44/140 (31%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
V T V ++ ++ + L + + + ++
Sbjct: 147 VPFTGMQVLIQNGANANQMVAIDLYKMNAEELNLRTSAATVLIQVDSNTTANNAIITLEA 206
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
I + K+G+ +R+ + + + R++D DMA E + + QQ
Sbjct: 207 AISKISDQRSKLGAYQNRLEKTIANLDNTAENLTGARSRILDTDMALEMSEFTKFNILQQ 266
Query: 431 LAVQALSIVNNSTARILSLF 450
LS N +L L
Sbjct: 267 AGTAMLSQANQQPQMMLKLL 286
>gi|332994152|gb|AEF04207.1| flagellin-like protein [Alteromonas sp. SN2]
Length = 283
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 74/202 (36%), Gaps = 3/202 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN S+++A ++L NL+ +R+SSG R++ AAD+AA I M S L+
Sbjct: 5 VNTNVSSLNAQRQLFSTGNNLDTAFERLSSGFRINSAADDAAGLQITDRMTSQVQGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
S A+ M + + I+ D ++Q E++ L++++
Sbjct: 65 VRNANDAISLSQTAEGAMQETTTALQRIRTLAIQSQNGINSSADRLALQKEVSALRTEIS 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + F G + L + A + + + I+ + ++ +
Sbjct: 125 RIATTTQFAGVDVLTGAFSARFLVGANAGQTISVNLSTQALGRAGINGFSATGLGIVGGN 184
Query: 181 TDGTERYGLLDRNHKIKVEPQV 202
D +
Sbjct: 185 NDVLTETNASALLGSVDNAISA 206
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 37/101 (36%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
+ + ++ +D I +G++ +R + + + V R
Sbjct: 182 GGNNDVLTETNASALLGSVDNAISAIGGLRADLGALQNRFQSTIRNLSNISENVSAARSR 241
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ D D A+E+ LS Q QQ + L+ N LSL
Sbjct: 242 IKDTDFATETAELSRNQILQQASTTILAQANQRPQAALSLL 282
>gi|332298177|ref|YP_004440099.1| flagellin domain protein [Treponema brennaborense DSM 12168]
gi|332181280|gb|AEE16968.1| flagellin domain protein [Treponema brennaborense DSM 12168]
Length = 285
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 70/170 (41%), Gaps = 3/170 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N S+M A++ L N ++ +++SSG R++ A D+A+ ++++ M+S L+
Sbjct: 2 VINHNMSSMYANRTLGVSNAQIQGNIEKLSSGQRINKAGDDASGLAVSEKMRSQIRGLNQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
I G S + + + + D++ ++ D IQ E++QL S++
Sbjct: 62 AERNIQNGVSFIQTTEGYLQETTDILQRVRELAVQSANGIYTDEDRMQIQVEVSQLVSEV 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
IA + FNG N L + + S D
Sbjct: 122 DRIASQAQFNGMNMLTGGFAADSVSGRVMQFQIGANVDQNARVYIGTMTA 171
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 46/118 (38%)
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + ++ + A +S +D+ +K + +G+ +R +
Sbjct: 167 GTMTAQALGLSGVQGTEDSRIGIATPDAANMAISTLDSALKTVSKQRADLGAYQNRFEMA 226
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + + ++ R+ D DMASE + Q Q L+ N+ + +L+L
Sbjct: 227 ANGVAVAAENLQASESRIRDTDMASEMVDFTKNQILTQAGTAMLAQANSQSQNVLALL 284
>gi|284926560|gb|ADC28912.1| flagellin [Campylobacter jejuni subsp. jejuni IA3902]
Length = 576
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 95/279 (34%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGGRISSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ K + ++
Sbjct: 185 EVQFTLKNYNGIDDFKFQKVVISTSVGTGLGALADEINKNADKTGVRATFTVETRGMAAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + + G + S S
Sbjct: 245 RAGTTSDDFAINGVKIGKVDYKDGDANGALVSAINSVKD 283
Score = 95.6 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T IGS+ +++ + + I + + V+ ++ D D
Sbjct: 480 VTTLKGAMAVMDIAETATTNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESQIRDVD 539
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A++ N+ +L L +
Sbjct: 540 FAAESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ 576
>gi|229827769|ref|ZP_04453838.1| hypothetical protein GCWU000182_03161 [Abiotrophia defectiva ATCC
49176]
gi|229827770|ref|ZP_04453839.1| hypothetical protein GCWU000182_03162 [Abiotrophia defectiva ATCC
49176]
gi|229787968|gb|EEP24082.1| hypothetical protein GCWU000182_03161 [Abiotrophia defectiva ATCC
49176]
gi|229787969|gb|EEP24083.1| hypothetical protein GCWU000182_03162 [Abiotrophia defectiva ATCC
49176]
Length = 270
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 75/187 (40%), Gaps = 3/187 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N +AM+++++L + +++SSG +++ AAD+AA +I++ M+S L+
Sbjct: 2 VVQHNLTAMNSNRQLGITSALQAKSSEKLSSGYKINRAADDAAGLTISEKMRSQVRGLNR 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
SD G S + +A+ +++ ++ + +D +IQ EI QL S++
Sbjct: 62 ASDNAQDGISLIQVAEGALNETHSILQRMNELAVQAANDTNTQSDRGAIQQEINQLTSEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I + FN +N L D + + LD
Sbjct: 122 DRIKDTTQFNTQNLLNGDFADRKLHVGALKDQVIEISIKNMDADSIGVSGLDVTEQSSAE 181
Query: 180 STDGTER 186
+
Sbjct: 182 DAIEKVQ 188
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 42/110 (38%)
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ + E+ + E+ + + I + ++G+I +R+ + + +
Sbjct: 161 NMDADSIGVSGLDVTEQSSAEDAIEKVQQGISSVSQQRSELGAIQNRLEHTVANLNNVSE 220
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ R+ D D+ +E S Q L+ N ST +LSL R
Sbjct: 221 NTQAAESRIRDTDVPTEMVSFSKNNILAQAGQAMLAQANQSTQGVLSLLR 270
>gi|40532|emb|CAA40460.1| flagellin [Campylobacter jejuni]
Length = 576
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 94/279 (33%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ K + ++
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGTGLGALADEINKNADKTGVRATFTVETRGMAAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + G + S S
Sbjct: 245 RAGTTSDTFAINGVKIGKVAYEDGDANGALVSAINSVKD 283
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + I + + V+ ++ D D
Sbjct: 480 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVD 539
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A++ N+ +L L +
Sbjct: 540 FAAESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ 576
>gi|13569474|gb|AAK31137.1| flagellar antigen FlaB [Leptospira interrogans]
Length = 257
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 28/245 (11%), Positives = 73/245 (29%), Gaps = 3/245 (1%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ L+ ++ VSSG+R++ AAD+A+ ++++ +++ L G S
Sbjct: 1 HRSLKFNELAVDKTMKAVSSGMRINSAADDASGLAVSEKLRTQINGLRQAERNTEDGMSF 60
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ A+ + + +++ I+ D + +Q E++ L ++ IA + FN
Sbjct: 61 IQTAEGFLEQTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVDRIASQAEFNK 120
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+ + ++ + I T+ +
Sbjct: 121 FKLFEGQFARGSRVASMWFHMGPNQNQRERFYIGTMTSKALKLVKADGRPIAISSPGEAN 180
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
D + + + L + + D + +
Sbjct: 181 DVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDADMAEEVVSL 240
Query: 251 PLPAA 255
Sbjct: 241 TTKQI 245
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 29/82 (35%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ D + +G+ +R+ + + ++ R+ DAD
Sbjct: 173 ISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDAD 232
Query: 415 MASESTRLSALQTQQQLAVQAL 436
MA E L+ Q Q L
Sbjct: 233 MAEEVVSLTTKQILVQSGTAML 254
>gi|303240165|ref|ZP_07326685.1| flagellin domain protein [Acetivibrio cellulolyticus CD2]
gi|302592256|gb|EFL61984.1| flagellin domain protein [Acetivibrio cellulolyticus CD2]
Length = 271
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/253 (13%), Positives = 82/253 (32%), Gaps = 3/253 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A +A ++L+ + E +++SSG R++ A D+AA SI++ M+ L
Sbjct: 3 INNNMMAYNAHRQLKTNSAAQEKSLEKLSSGYRINRAGDDAAGLSISEKMRGQIRGLQQS 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQSQLR 120
S G S + A+ +S+ ++ ++ D +I++E+ L ++
Sbjct: 63 SRNAQDGISLIQTAEGALSETHSILQRMRELAVQASNDTNVTNDRTAIETELDDLAEEVT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN + + A + + + ++
Sbjct: 123 RIADKTQFNTQKLIDGSFSGVIQIGANAGENLNFSIASMTASALGVLDADIAVDTTANAQ 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + ++ + + ++ + T + + A
Sbjct: 183 SSISVINSAINTVSTQRAKLGAKQNRLEHTINNLDTAAENLQASESRIRDVDMAQEMMSY 242
Query: 241 QAKGIATIPVPLP 253
I
Sbjct: 243 TKNNILNQAATAM 255
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 39/97 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +S I++ I + K+G+ +R+ + + + ++ R+ D D
Sbjct: 175 VDTTANAQSSISVINSAINTVSTQRAKLGAKQNRLEHTINNLDTAAENLQASESRIRDVD 234
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + Q A L+ N + +L L +
Sbjct: 235 MAQEMMSYTKNNILNQAATAMLAQANQAPQGVLQLLQ 271
>gi|283780147|ref|YP_003370902.1| flagellin domain-containing protein [Pirellula staleyi DSM 6068]
gi|283438600|gb|ADB17042.1| flagellin domain protein [Pirellula staleyi DSM 6068]
Length = 704
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 56/374 (14%), Positives = 114/374 (30%), Gaps = 4/374 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I TN S++ A + L N L+ DR+S+GLR++ D+ A ++ ++ D A
Sbjct: 1 MSRINTNVSSLIAQKTLARSNAELQTSLDRLSTGLRINSGKDDPAGLIASENLRRDITAS 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS----KSIQSEITQLQ 116
+ + A + +S+ +++ I+ ++ G S + Q +I
Sbjct: 61 ERAIKNTEQANQLIATADSALSQVSGLLNDIRGLVSEAANTGALSDEQIAANQLQIDSSL 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+ IA+ ++F G+ L L T+ S R D + T +
Sbjct: 121 EAIDRIAQTTTFQGKKLLDGSLDFITSFTTGESSVSDFRIDQANLGATGELAVNIDVSAA 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
++ N + T++T + + A A
Sbjct: 181 ATRASITNGSIPYTVGNSATGTLTFADVTTPAVQSTGTLTLATTVADIDIEAVAGEAADG 240
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
D + A A + + +V + I + A+ +
Sbjct: 241 LAGDDVEIEFVSGATTGALYDAQTGILTVTLATGATVDDAVAAIEATDEFTATLASGTGT 300
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
D S + V + + + T N + +
Sbjct: 301 DAVDVADIISYTGVLTGGADQVADNDIITIAAAGSGTAFNGTLTFATSNTVTAGDANVTL 360
Query: 357 EKLAMEEMVSFIDT 370
+ V+ DT
Sbjct: 361 TNGNITITVNDSDT 374
Score = 92.9 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 1/93 (1%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSR-IHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+ +D I G++G+ + + + + + DAD A+E
Sbjct: 611 DITGAAKVVDEVINEVVQLRGRLGAFQRTTLETNITTLSDTLTNLTEAESTIRDADFAAE 670
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
S RL+ Q Q L I N++ +LSL R
Sbjct: 671 SARLTRAQILVQSGTSVLGIANSNPQNVLSLLR 703
>gi|14278898|dbj|BAB58985.1| flagellin [Bacillus subtilis]
Length = 280
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/269 (16%), Positives = 94/269 (34%), Gaps = 5/269 (1%)
Query: 9 SAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
+A++ +L N + +++SSGLR++ A D+AA +I++ M+ L S
Sbjct: 1 AALNTLNRLSSNNSASQKNMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLEMASKNSQ 60
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI-----QSEITQLQSQLRDIA 123
G S + A+ ++ ++ ++ + GT K+ Q EI+ L ++ I+
Sbjct: 61 DGISLIQTAEGALTDTHAILQRVREPVVQAGNTGTQDKATDLQSIQDEISALTDEIDGIS 120
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ FNG+ L TA+ A F N QI+ + + + + +
Sbjct: 121 NRTEFNGKILLDGTYKVDTATPANQKNLVFQIGANATQQISVNIEDMGADALGIKEADGS 180
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
++ K D+ + ++++ N
Sbjct: 181 IAALHSVNDLDVTKFADNAADTADIGFDAQLKVVDEAINQVSSQRAKLGAVQNRLEHTIN 240
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
++ L AA + +
Sbjct: 241 NLSASGENLTAAESRIRDVDMAKEMSEFT 269
Score = 90.6 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 21/149 (14%), Positives = 51/149 (34%)
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
D + T ++ K+ I + +S+ L+
Sbjct: 132 DGTYKVDTATPANQKNLVFQIGANATQQISVNIEDMGADALGIKEADGSIAALHSVNDLD 191
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+T+ A+ A + + + +D I ++ K+G++ +R+ + + + +
Sbjct: 192 VTKFADNAADTADIGFDAQLKVVDEAINQVSSQRAKLGAVQNRLEHTINNLSASGENLTA 251
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQ 434
R+ D DMA E + + Q +
Sbjct: 252 AESRIRDVDMAKEMSEFTKNNILSQASQA 280
>gi|229916631|ref|YP_002885277.1| flagellin domain protein [Exiguobacterium sp. AT1b]
gi|229468060|gb|ACQ69832.1| flagellin domain protein [Exiguobacterium sp. AT1b]
Length = 300
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 60/136 (44%), Gaps = 3/136 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A+ A L +++ DR+SSG+R++ A+D+AA +I++ M+ +LS
Sbjct: 3 ITNNVQALKAYSSLSLNQASMKKTMDRLSSGVRINKASDDAAGLAISEKMRMRLDSLSMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQLR 120
S + GM++ ++ ++ ++Q EI L +++
Sbjct: 63 ERNTLDSISLTQTLEGGMNETHSLLQRMRELSVQAANGTLSEDDAKAVQEEINALTAEVT 122
Query: 121 DIARGSSFNGENWLRT 136
IA + FN + +
Sbjct: 123 RIAETTEFNSKKIMNG 138
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 36/96 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +S D I + K+G+I +R+ + + + + R+ DAD
Sbjct: 204 VLTPADAGDAISKFDAAINKVSLERSKLGAIQNRLEANVSVVAIGSENLTASESRIRDAD 263
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA E + L Q + ++ N +L L
Sbjct: 264 MAREMMDFARLNILNQSGMAMIAQSNALPQGVLQLL 299
>gi|307748216|gb|ADN91486.1| Hypothetical protein CJM1_1295 [Campylobacter jejuni subsp. jejuni
M1]
Length = 221
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 76/208 (36%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNSNELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFTNQEFQIGASSNQTIKATIGATQSSKIGVTRFETGAQSFTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
G + +
Sbjct: 185 VVGLTIKNYNGIEDFKFDNVVISTSVGT 212
>gi|332140554|ref|YP_004426292.1| flagellin [Alteromonas macleodii str. 'Deep ecotype']
gi|327550576|gb|AEA97294.1| flagellin [Alteromonas macleodii str. 'Deep ecotype']
Length = 319
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 66/158 (41%), Gaps = 3/158 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN S+++A +++ + L+ +R+SSGLR++ AAD+AA I ++S L
Sbjct: 3 LTVNTNISSLNAQRQMMGSSLGLDQAFERLSSGLRINSAADDAAGLQITDRLQSQILGLD 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S A+ M + ++ D +IQ E+ L +
Sbjct: 63 QGNRNANDGISLAQTAEGAMEEITSSFQRVRTLAAQAANGSNSDVDRLAIQDEVRALMEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRD 156
+ IA ++F GEN L A ++
Sbjct: 123 VNRIAGDTTFGGENILDGSYNGVFQVGADAIQTIGFDM 160
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 43/97 (44%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + +++ +D+ I ++G++ +R + + + R+ DAD
Sbjct: 223 VSTQGNAQGVLAGMDSLIAVVDKKRAELGAVQNRFQSTISNQANISENLSAAKSRIKDAD 282
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+E+ +L+ Q QQ + L+ N LSL +
Sbjct: 283 FAAETAKLTKNQILQQASQTILAQANQRPQAALSLLQ 319
>gi|218888034|ref|YP_002437355.1| flagellin domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758988|gb|ACL09887.1| flagellin domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 296
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/277 (17%), Positives = 92/277 (33%), Gaps = 4/277 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N AM+A++ L NL R+SSGLRV A+D+AA +I ++M+SD AL+
Sbjct: 3 LVINHNLMAMNAARNLSSSYGNLSTSVRRLSSGLRVGAASDDAAGLAIRELMRSDIAALN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K I SE + S+
Sbjct: 63 QGVRNANDAISLIQTADGALGVIDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTD-LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ IA + FNG + L + G++ G + YY+ T
Sbjct: 123 ITRIANSTDFNGIHLLNGNLSGATHDGSGLVSTGKLKVHFGSANDCSEDYYYIRIGTSTA 182
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ G++ ++ + Q + + + I L +
Sbjct: 183 SALGVGSQAAEGKGKSISTQSAAQAALEGIENAIISKDKIRANLGALQNRLENTISNLQI 242
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ + + + + T +++
Sbjct: 243 QSENLQAAESRISDVDVSSEMTEFTRQQILTQAAVAM 279
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 42/98 (42%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + A + + I+ I +G++ +R+ +++ + ++ R+ D D
Sbjct: 199 ISTQSAAQAALEGIENAIISKDKIRANLGALQNRLENTISNLQIQSENLQAAESRISDVD 258
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
++SE T + Q Q AV LS N+ + L G
Sbjct: 259 VSSEMTEFTRQQILTQAAVAMLSQANSLPRMAMQLLGG 296
>gi|3290048|gb|AAC25649.1| flagellin A [Campylobacter jejuni]
Length = 572
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 79/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + +
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGT 212
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 36/97 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T IGS+ +++ + I + + V+ ++ D D
Sbjct: 476 VTTLKGAMAVMDIAETATTNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVD 535
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A++ N+ +L L +
Sbjct: 536 FAAESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ 572
>gi|189339490|gb|ABD33740.2| flagellin [Bacillus thuringiensis serovar neoleonensis]
Length = 377
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 78/202 (38%), Gaps = 3/202 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 3 INTNINSMRTQEYMRQNQTKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARENGLGVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + ++ +++ +++ + K++ E + L+ Q+
Sbjct: 63 ANNTQDGMSLIRTADSALNSVSNILLRMRDIANQSANGTNTSDNQKALDKEFSALKEQID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FN + L D S + + + N T+ +
Sbjct: 123 YISKNTEFNDKKLLNGDNKSIAIQTLDNADTTKQININLADSSTSALNIDKLSIEGTGNK 182
Query: 181 TDGTERYGLLDRNHKIKVEPQV 202
T + I
Sbjct: 183 TITLTAADIAKDKTNIDAVGTA 204
Score = 91.0 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/331 (10%), Positives = 91/331 (27%)
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + S + + + +
Sbjct: 47 AIATRMRARENGLGVAANNTQDGMSLIRTADSALNSVSNILLRMRDIANQSANGTNTSDN 106
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
++ + + + + + +I+ + A T+ +
Sbjct: 107 QKALDKEFSALKEQIDYISKNTEFNDKKLLNGDNKSIAIQTLDNADTTKQININLADSST 166
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A I + + T + + K+ A + A NS +D
Sbjct: 167 SALNIDKLSIEGTGNKTITLTAADIAKDKTNIDAVGTAKTALAGLTGTPAAAAINSAVAD 226
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ K + + + + + + + + + T A D
Sbjct: 227 FKTAFAKADKNLMSDAQIKSVTDAITAFEADATPDLTKAKAIGTAYTAPAAGDITKASPN 286
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
E + ID + + +G+ +R+ + +K ++ ++ DADMA E +
Sbjct: 287 ASEAIKSIDAALDTIASNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMS 346
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + + + LS N + + L +
Sbjct: 347 EMTKFKILNEAGISMLSQANQTPQMVSKLLQ 377
>gi|157376208|ref|YP_001474808.1| flagellin [Shewanella sediminis HAW-EB3]
gi|157318582|gb|ABV37680.1| flagellin [Shewanella sediminis HAW-EB3]
Length = 273
Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 33/228 (14%), Positives = 80/228 (35%), Gaps = 3/228 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +++ A + L + L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSLKAQKNLNVSSGALATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
S IA+ M + +++ +++ D ++++E+ QL +++
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTIQAENGANSVDDIAALKAEMDQLVTEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I ++F L + G I+ K ++ +
Sbjct: 124 DLIGTSTAFGNTKLLTGGFSAGKNFQVGHQDGEDIKVTVKKTDKASLSVNAVVIATSANR 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
++ + + + +++ S +
Sbjct: 184 ASALGAIDKAIKTIDTQRADLGAIQNRVAHNISNSANTQANVADAKSR 231
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 53/209 (25%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + + + + A DI + + ++
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTIQAENGANSVDDIAALKAEMDQLVTEI 123
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
++ A + E T + N
Sbjct: 124 DLIGTSTAFGNTKLLTGGFSAGKNFQVGHQDGEDIKVTVKKTDKASLSVNAVVIATSANR 183
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ ID IK +G+I +R+ + V R+VD D A E+
Sbjct: 184 ASALGAIDKAIKTIDTQRADLGAIQNRVAHNISNSANTQANVADAKSRIVDVDFAKETAT 243
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q QQ L+ N LSL
Sbjct: 244 MTKNQVLQQTGSTMLAQANQLPQVALSLL 272
>gi|296282269|ref|ZP_06860267.1| flagellin [Citromicrobium bathyomarinum JL354]
Length = 275
Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 3/150 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I TN SAM A+ N L +R+S+G R++ A D+AA +IA M S +
Sbjct: 1 MSVINTNISAMKAANASSSANKALGTAMERLSTGKRINSAKDDAAGLAIATSMTSQVRGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
S G S A+ +++ +++ + D +++SE+ L +
Sbjct: 61 SQGIRNANDGISMAQTAEGALNEVTNMLQRQRELTVQASNNTYSADDLANLKSEMDALNT 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAK 147
Q+ ++ + FNG+ G++ +
Sbjct: 121 QISNVLGNTEFNGQKLFDASAGTAGVVTIQ 150
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 37/87 (42%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ D IK + +G+ +++ + + R+ D D ++E+T L+
Sbjct: 189 IALFDAAIKVVSTTRAGLGASQNQLESAVTNLNNNITNLSDARSRIEDTDYSTETTALAK 248
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q Q + LS N S +LSL R
Sbjct: 249 AQILSQASGAMLSQANQSQQNVLSLLR 275
>gi|117919780|ref|YP_868972.1| flagellin domain-containing protein [Shewanella sp. ANA-3]
gi|117612112|gb|ABK47566.1| flagellin domain protein [Shewanella sp. ANA-3]
Length = 273
Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/228 (16%), Positives = 74/228 (32%), Gaps = 3/228 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M A + L + L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSMKAQKNLNTSSSGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S IA+ M + +++ +++ D +IQ EI QL ++
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQAENGANSTDDLDAIQKEINQLSEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I ++F + + G I G ++
Sbjct: 124 TAIGDSTAFGNTLLMTGLFSTGKTFQVGHQEGEDITISVGTTNAGSLSVNALAIASAGGR 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
ST + + ++ S +
Sbjct: 184 STALANIDAAIKTIDNQRANLGAKQNRLAYNISNSANTQANVADAKSR 231
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 55/209 (26%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + + + + A D+ N ++ +
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQAENGANSTDDLDAIQKEINQLSEEI 123
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ A + E + T + N A
Sbjct: 124 TAIGDSTAFGNTLLMTGLFSTGKTFQVGHQEGEDITISVGTTNAGSLSVNALAIASAGGR 183
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ ID IK +G+ +R+ + V R+VD D A E++
Sbjct: 184 STALANIDAAIKTIDNQRANLGAKQNRLAYNISNSANTQANVADAKSRIVDVDFAKETSV 243
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q QQ L+ N LSL
Sbjct: 244 MTKNQVLQQTGSAMLAQANQLPQVALSLL 272
>gi|229138460|ref|ZP_04267049.1| Flagellin [Bacillus cereus BDRD-ST26]
gi|228644997|gb|EEL01240.1| Flagellin [Bacillus cereus BDRD-ST26]
Length = 364
Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R+++A+D+AA +IA M++ L S+ G
Sbjct: 1 MRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVASNNTQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + A + ++ +++ +++ + ++Q E +L+ Q++ IA +
Sbjct: 61 MSLIRTADSALNSVSNILLRMRDLANQSANGTNTNENKAAMQKEFGELKEQIKYIAENTQ 120
Query: 128 FNGENWLRTDLG 139
FN ++ L D G
Sbjct: 121 FNDQHLLNADKG 132
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 59/181 (32%)
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ G D+ V+A YTNS K + ++T + K
Sbjct: 184 NATMDRLDATVPGTRDVDVQAAKDAFDKVKGFYTNSDSVKAIERAFEDYATASTAGTAKA 243
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
+ N T ++ ID +K +G+ +R+
Sbjct: 244 DAATAIKAAFDLAANKVGKPATGGAQGSANSLGAITKIDAALKTVADNRATLGATLNRLD 303
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ +K ++ ++ DADMA E + ++ + + + LS N + + L
Sbjct: 304 FNVNNLKSQASSMAAAASQVEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLL 363
Query: 451 R 451
+
Sbjct: 364 Q 364
>gi|167769547|ref|ZP_02441600.1| hypothetical protein ANACOL_00881 [Anaerotruncus colihominis DSM
17241]
gi|167668515|gb|EDS12645.1| hypothetical protein ANACOL_00881 [Anaerotruncus colihominis DSM
17241]
Length = 386
Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 41/227 (18%), Positives = 90/227 (39%), Gaps = 3/227 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ +N A++A ++L N + +++SSG R++ A D+A+ +I++ MK+ L
Sbjct: 4 VVRSNIMAVNAQRQLGMNNSQVGKALEKLSSGYRINRAGDDASGLAISEKMKAQIKGLDT 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQL 119
S G S V A+ +++ ++++ + T G+ ++ S+Q E+ +LQ ++
Sbjct: 64 ASLNSQDGISLVQTAEGALTEVHNMLNRMTELATRSANGINEDSNRASLQKEVAKLQEEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I++ ++FN L + A+ A + G G T +
Sbjct: 124 DRISKSTNFNNLKLLDGSQTYAAATAAGNANGVQNLTIEGGNLSATGQGVSVALSAQGAV 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ T + + + + V D + L
Sbjct: 184 TVTVTGGANVAFKTTQTGKGFYSITADLSKVTDDKVKAAWAGVTLNF 230
Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats.
Identities = 22/204 (10%), Positives = 52/204 (25%)
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
+ V + T+ T A + W T S+
Sbjct: 183 VTVTVTGGANVAFKTTQTGKGFYSITADLSKVTDDKVKAAWAGVTLNFSVDEAKNDGTYV 242
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
+ + + + + + + +
Sbjct: 243 TTAAAIQNVGKNGSMQLQIGDTADDFNQLKVGIGDMSSKGLGIDKVDISNQDGAAKAIDT 302
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
I I ++ +G+ +R+ + + + ++ R+ D DMA + +
Sbjct: 303 IKNAIDRVSSQRASLGATQNRLEYTINNLDTASENLQAANSRIRDTDMAKMMMEYTKMNV 362
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
Q A L+ N +L L +
Sbjct: 363 LTQSAQAMLAQANQQPQSVLQLLQ 386
>gi|157376207|ref|YP_001474807.1| flagellin [Shewanella sediminis HAW-EB3]
gi|157318581|gb|ABV37679.1| flagellin [Shewanella sediminis HAW-EB3]
Length = 272
Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 33/228 (14%), Positives = 81/228 (35%), Gaps = 3/228 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +++ A + L + NL +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSLKAQKNLNTSSGNLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S IA+ M + +++ +++ D ++++E+ QL +++
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQAENGANSADDIAALKAEMDQLVNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I ++F + + G I+ K ++ +
Sbjct: 124 DAIGTTTAFGNTKLMTGTFSAGKNFQVGHQDGEDIKVTVKKTDKASLSVNAVVIATSANR 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
++ + + + +++ S +
Sbjct: 184 ASALGAIDKAIKTIDTQRADLGAIQNRLSHNISNSANTQANVADAKSR 231
Score = 99.4 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 31/209 (14%), Positives = 54/209 (25%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + + + + A DI + + ++
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQAENGANSADDIAALKAEMDQLVNEI 123
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+T A + E T + N
Sbjct: 124 DAIGTTTAFGNTKLMTGTFSAGKNFQVGHQDGEDIKVTVKKTDKASLSVNAVVIATSANR 183
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ ID IK +G+I +R+ + V R+VD D A E++
Sbjct: 184 ASALGAIDKAIKTIDTQRADLGAIQNRLSHNISNSANTQANVADAKSRIVDVDFAKETSA 243
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q QQ L+ N LSL
Sbjct: 244 MTKNQVLQQTGSAMLAQANQLPQVALSLL 272
>gi|27127329|dbj|BAC44986.1| flagellin [Campylobacter jejuni]
Length = 574
Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 94/279 (33%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 64 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 124 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ K + ++
Sbjct: 184 EVQFTLKNYNGIDDFKFQKVVISTSVGTGLGALADEINKNADKTGVRATFTVETRGMGAV 243
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + G S + S
Sbjct: 244 RAGTTSEDFTINGVKIGQIEYKDGDSNGALVAAINSVKD 282
Score = 96.3 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + I + + V+ ++ D D
Sbjct: 478 VTTLKGAMAVMDIPETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVD 537
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ASES S Q A++ N+ +L L +
Sbjct: 538 FASESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ 574
>gi|315654623|ref|ZP_07907529.1| flagellin [Mobiluncus curtisii ATCC 51333]
gi|315491087|gb|EFU80706.1| flagellin [Mobiluncus curtisii ATCC 51333]
Length = 407
Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 3/137 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN A++A + L R+SSG R++ AAD+++ ++ Q +K+
Sbjct: 129 SITTNIMALNAYRHNASAVQLLHQSLQRLSSGKRINSAADDSSGLALVQGLKTQVLGNRQ 188
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQL 119
G S A + +++ ++ G I +E+ ++ ++
Sbjct: 189 AIRNAQDGISLTQTADGVLDAVHEMLQRMRQLAVKGANDTYSLHARVQIGAEMDAIRVEI 248
Query: 120 RDIARGSSFNGENWLRT 136
I + + G L
Sbjct: 249 GRIGQATEAMGRRILGG 265
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 44/111 (39%)
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
+ + + + + A + + ID QI+ + A +G++ +R + + +
Sbjct: 294 DVTDIAKNQIGHIPQDADHAAFQRSLENIDDQIQVISGARAALGAVQNRFAHTINHLNVS 353
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + R+ D DMA+ES Q + LS ++ +L L
Sbjct: 354 VENLCAAQSRMQDVDMAAESMNYMRGLILNQSSRAVLSQALSAPRGVLRLL 404
>gi|3290032|gb|AAC25641.1| flagellin A [Campylobacter jejuni]
Length = 572
Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 79/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + +
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGT 212
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + I + + V+ ++ D D
Sbjct: 476 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVD 535
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A++ N+ +L L +
Sbjct: 536 FAAESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ 572
>gi|3290026|gb|AAC25638.1| flagellin A [Campylobacter jejuni]
Length = 576
Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 94/279 (33%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q+ I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQANINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SF+G+ L + + I S + + + S
Sbjct: 125 NIANTTSFSGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGERISSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ K + ++
Sbjct: 185 EVQFTLKNYNGIDDFKFQKVVISTSVGTGLGALADEINKNADKTGVRATFTVETRGMAAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + + G S S S
Sbjct: 245 RAGTTSDDFAINGVKIGKVDYKDGDSNGALVSAINSVKD 283
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + I + + V+ ++ D D
Sbjct: 480 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVD 539
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A++ N+ +L L +
Sbjct: 540 FAAESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ 576
>gi|206974734|ref|ZP_03235649.1| flagellin [Bacillus cereus H3081.97]
gi|206746753|gb|EDZ58145.1| flagellin [Bacillus cereus H3081.97]
Length = 338
Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 78/209 (37%), Gaps = 3/209 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L+
Sbjct: 3 INTNINSMRTQEYMRQNQAKMSTAMDRLSSGKRINNASDDAAGLAIATRMRARESGLNVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S G S + A + M+ +++ +++ + S+Q E ++L Q+
Sbjct: 63 SRNTQDGMSLIRTADSAMNSVSNILLRMRDLANQSATGTNTKGNQASLQKEFSELAKQIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN ++ L+ + S + D + +
Sbjct: 123 YIADNTKFNDQSLLKGTDSLAETSDGGGTPDASGTPDASGTPDASGTPDASGTPSSAPAP 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
I+ + ++
Sbjct: 183 AAADTALSNTGTKITIQTLDSNESEQQIN 211
Score = 93.7 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 39/104 (37%)
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
+ + ++ ID + +G+ +R+ +K +++
Sbjct: 235 SEGEVNQAGDATNARNAIAAIDKALTKIADNRATLGATLNRLDFNVTNLKSQENSMAASA 294
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ DADMA E + ++ + + + LS N + + L +
Sbjct: 295 SQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 338
>gi|327394255|dbj|BAK11677.1| flagellar biosynthesis FliC [Pantoea ananatis AJ13355]
Length = 309
Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 72/199 (36%), Gaps = 5/199 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNTLSLVTQNNLSKSQSSLGTAIERLSSGLRINSAKDDAAGEAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ +++ + + +++ D SIQ+E+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALTEVNNNLQRVRDLTVQAQNSSNSASDIDSIQAEVNQRMQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLG--SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
++ + + + FNG L T G + + + + T
Sbjct: 121 EIDRVTKQTDFNGIKVLNTGSGSSTYNFQVGAKDGETIGITISASDGFDLAAAGQSGTTQ 180
Query: 176 LLDSSTDGTERYGLLDRNH 194
+T T +
Sbjct: 181 NTSVTTGQTVNGNARTTSA 199
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 35/87 (40%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ ID IK +G+ +R + + R+ DAD A+E + +S
Sbjct: 223 LADIDKAIKAVDNQRSLLGASQNRFESTISNLNNTVTNLTAARSRIQDADYATEVSNMSR 282
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ L+ N +LSL R
Sbjct: 283 AQILQQAGSSVLAQANQVPQTMLSLLR 309
>gi|50120664|ref|YP_049831.1| flagellin [Pectobacterium atrosepticum SCRI1043]
gi|49611190|emb|CAG74636.1| flagellin [Pectobacterium atrosepticum SCRI1043]
Length = 290
Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 72/208 (34%), Gaps = 3/208 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++ L L +R+SSGLR++ A D+AA +IA M + +
Sbjct: 1 MAVINTNIMSLTTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRMTAQVKGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ +++ + + I+ T D SI E+TQ +
Sbjct: 61 TQAARNANDGISLTQTAEGNLNEINNNLQRIRELATQAANDPNGKTDRDSIVKEMTQRIN 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +A+ +SFNG L + + G+ + +
Sbjct: 121 EVNRVAQSASFNGTKLLDGSASAGIIIQVGANTGATETITIDSTALINATTGGSGSMSDV 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKD 205
S + D
Sbjct: 181 ASKITSLGAVATGSSANTAAQALITSLD 208
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 51/139 (36%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
NT + S + + + A + A + +++ +DT +
Sbjct: 152 NTGATETITIDSTALINATTGGSGSMSDVASKITSLGAVATGSSANTAAQALITSLDTAL 211
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
AA +G+I +R + + + R+ DAD A+E + +S Q QQ
Sbjct: 212 SAVDAARSNLGAIQNRFESTITNLNNSINNLSSARSRIEDADYATEVSNMSRSQILQQAG 271
Query: 433 VQALSIVNNSTARILSLFR 451
LS N +LSL R
Sbjct: 272 TSVLSQANQVPQTVLSLLR 290
>gi|332139404|ref|YP_004425144.1| Flagellin [Pantoea ananatis LMG 20103]
gi|326698717|gb|AEA04441.1| Flagellin [Pantoea ananatis LMG 20103]
Length = 301
Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 70/184 (38%), Gaps = 3/184 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNTLSLVTQNNLTKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFSSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ +++ + + +++ D SIQ+E+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALTEVNNNLQRVRDLTVQAQNSSNSASDIDSIQAEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L T GSST + + T
Sbjct: 121 EINRVTKQTDFNGIKVLNTGSGSSTYNFQVGAKDGETIGITISASNGFNLFNTSGATSQT 180
Query: 178 DSST 181
T
Sbjct: 181 TGQT 184
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/237 (13%), Positives = 65/237 (27%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ T GA + N +A + + +
Sbjct: 65 RNANDGISLSQTAEGALTEVNNNLQRVRDLTVQAQNSSNSASDIDSIQAEVNQRMEEINR 124
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ G + + + T+ + + +T+ + + +
Sbjct: 125 VTKQTDFNGIKVLNTGSGSSTYNFQVGAKDGETIGITISASNGFNLFNTSGATSQTTGQT 184
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
I+ + + ++ ID IK +G+ +R
Sbjct: 185 INGNARTTAAEGFDVLSGTVTSGGSTDGAPLADIDAAIKAVDNQRSLLGASQNRFESTIS 244
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R+ DAD A+E + +S Q QQ L+ N +LSL R
Sbjct: 245 NLNNTVTNLTAARSRIQDADYATEVSNMSRAQILQQAGFSVLAQANQVPQTMLSLLR 301
>gi|153001461|ref|YP_001367142.1| flagellin domain-containing protein [Shewanella baltica OS185]
gi|160876186|ref|YP_001555502.1| flagellin domain-containing protein [Shewanella baltica OS195]
gi|151366079|gb|ABS09079.1| flagellin domain protein [Shewanella baltica OS185]
gi|160861708|gb|ABX50242.1| flagellin domain protein [Shewanella baltica OS195]
gi|315268382|gb|ADT95235.1| flagellin domain protein [Shewanella baltica OS678]
Length = 271
Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/262 (15%), Positives = 94/262 (35%), Gaps = 3/262 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M A + L L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSMKAQKNLNASGNALATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S IA+ M + +++ +++ +D ++Q+EI QL ++
Sbjct: 64 GMRNANDGISVAQIAEGAMQEQTNMLQRMRDLSVQAVNGANSTSDRDALQAEIDQLALEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ ++F L + + + + +G L T +L S
Sbjct: 124 TAISSTTAFGDTKLLDSSFAGKSFQVGHQEGENISISISGTNATALGVNALAVSTDILAS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G + + + + ++ +++ T + + +
Sbjct: 184 TATGAIDDAIKAIDTQRAKLGATQNRLSHNISNSANTQANVADAKSRIVDVDFAKETSQM 243
Query: 240 DQAKGIATIPVPLPAAPAAPNT 261
+ + + + A
Sbjct: 244 TKNQVLQQTGSAMLAQANQLPQ 265
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 36/96 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ID IK K+G+ +R+ + V R+VD D
Sbjct: 176 VSTDILASTATGAIDDAIKAIDTQRAKLGATQNRLSHNISNSANTQANVADAKSRIVDVD 235
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A E+++++ Q QQ L+ N LSL
Sbjct: 236 FAKETSQMTKNQVLQQTGSAMLAQANQLPQVALSLL 271
>gi|3290040|gb|AAC25645.1| flagellin A [Campylobacter jejuni]
Length = 572
Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 79/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + +
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGT 212
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + I + + V+ ++ D D
Sbjct: 476 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVD 535
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A++ N+ +L L +
Sbjct: 536 FAAESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ 572
>gi|227112546|ref|ZP_03826202.1| flagellin [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
gi|227329189|ref|ZP_03833213.1| flagellin [Pectobacterium carotovorum subsp. carotovorum WPP14]
gi|60115449|dbj|BAD90016.1| flagellin [Pectobacterium carotovorum subsp. carotovorum]
Length = 290
Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 70/182 (38%), Gaps = 3/182 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++ L L +R+SSGLR++ A D+AA +IA M + +
Sbjct: 1 MAVINTNIMSLTTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRMTAQVKGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ +++ + + I+ T D SI E+TQ +
Sbjct: 61 TQAARNANDGISLTQTAEGNLNEINNNLQRIRELATQAANDPNGKTDRDSIVKEMTQRIN 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +A+ +SFNG L + + G+ + +
Sbjct: 121 EVNRVAQSASFNGTKLLDGSASAGIIIQVGANTGATETITIDSTALINATTGGTGSMSDV 180
Query: 178 DS 179
+
Sbjct: 181 AA 182
Score = 91.0 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 50/139 (35%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
NT + S + + A + A + +++ +DT +
Sbjct: 152 NTGATETITIDSTALINATTGGTGSMSDVAAKITSLGAVATGSSANSAAQALITSLDTAL 211
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
AA +G+I +R + + + R+ DAD A+E + +S Q QQ
Sbjct: 212 SAVDAARSNLGAIQNRFESTITNLNNSINNLSSARSRIEDADYATEVSNMSRSQILQQAG 271
Query: 433 VQALSIVNNSTARILSLFR 451
LS N +LSL R
Sbjct: 272 TSVLSQANQVPQTVLSLLR 290
>gi|57168249|ref|ZP_00367388.1| flagellin (flaA) [Campylobacter coli RM2228]
gi|57020623|gb|EAL57292.1| flagellin (flaA) [Campylobacter coli RM2228]
Length = 576
Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 94/279 (33%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ K + ++
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGTGLGALADEINKNADKTGVRATFTVETRGMAAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + G S + S
Sbjct: 245 RAGTTSDDFAINGVKIGKVEYKDGDSNGALVAAINSVKD 283
Score = 97.1 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + I + + V+ ++ D D
Sbjct: 480 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVD 539
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A++ N+ +L L +
Sbjct: 540 FAAESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ 576
>gi|306821845|ref|ZP_07455432.1| flagellin [Eubacterium yurii subsp. margaretiae ATCC 43715]
gi|304550116|gb|EFM38120.1| flagellin [Eubacterium yurii subsp. margaretiae ATCC 43715]
Length = 297
Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 22/214 (10%), Positives = 58/214 (27%)
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
++ A S + ++ + +
Sbjct: 84 KYETAAWGDLAGTNQATKLEVTVNGVTKEISMDGDTEKNVAKLKEKLEAAFTNVDVGLNG 143
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + + + V + +T + +
Sbjct: 144 QKITFTSKTAGEGDMSVNIKVKSGTTNGFGAAGTTVGGTATAGQDAYAVGDFKLDINVRS 203
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
++++ + ID+ I ++ +G++ +R+ + + + R+ D DMA
Sbjct: 204 ASSVKDTLKAIDSAISTVSSQRSSLGAVQNRLEHTIKNLNNAAENTQAAEARIRDTDMAK 263
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + + Q A +S N + L L R
Sbjct: 264 EMSTFTKNNVLSQAAQAMISQANQIPNQALQLLR 297
>gi|49477319|ref|YP_035879.1| flagellin [Bacillus thuringiensis serovar konkukian str. 97-27]
gi|49328875|gb|AAT59521.1| flagellin [Bacillus thuringiensis serovar konkukian str. 97-27]
Length = 367
Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 76/177 (42%), Gaps = 3/177 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + ++ +++ +++ + +++Q E QL+ Q+
Sbjct: 63 ANNTQDGMSLIRTADSALNSVSNILLRMRDIANQSANGTNTADNQQALQKEFGQLKEQIS 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
IA + FN + L+ D ++ + I D V + +
Sbjct: 123 YIADNTEFNDKTLLKADNSVKIQTLDSADTNKQISIDLKGVTLNQLGLDTVNIGSET 179
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/308 (9%), Positives = 77/308 (25%)
Query: 144 SIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
+A + + + + + + + + +
Sbjct: 60 GVAANNTQDGMSLIRTADSALNSVSNILLRMRDIANQSANGTNTADNQQALQKEFGQLKE 119
Query: 204 KDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTS 263
+ ++ + K + A L + +
Sbjct: 120 QISYIADNTEFNDKTLLKADNSVKIQTLDSADTNKQISIDLKGVTLNQLGLDTVNIGSET 179
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
++ S + + A A ++ + + + V+
Sbjct: 180 LSAESLNVAKATMARLVKADQNADPSTFALDVNTAKESFDKIKGFITNKTNVQNVENAFN 239
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
K + N T V ID +K + +G
Sbjct: 240 DYTVADPADKADKADAIQAAFNTAITGLTAGTPNTSNPSSAVDAIDAALKTVASNRATLG 299
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
+ +R+ + +K ++ ++ DADMA E + ++ + + + LS N +
Sbjct: 300 ATLNRLDFNVNNLKSQSASMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTP 359
Query: 444 ARILSLFR 451
+ L +
Sbjct: 360 QMVSKLLQ 367
>gi|304412496|ref|ZP_07394102.1| flagellin domain protein [Shewanella baltica OS183]
gi|307307155|ref|ZP_07586893.1| flagellin domain protein [Shewanella baltica BA175]
gi|304349138|gb|EFM13550.1| flagellin domain protein [Shewanella baltica OS183]
gi|306910394|gb|EFN40825.1| flagellin domain protein [Shewanella baltica BA175]
Length = 272
Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/227 (16%), Positives = 77/227 (33%), Gaps = 3/227 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M + TN++++ A + N L +R+S+GLR++ A+D+AA IA M ++ +
Sbjct: 1 MLGVHTNYASIVAQGAVNKSNNLLTNAMERLSTGLRINSASDDAAGLQIANRMSANVKGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQS 117
S I +S + A + + + + K T D K++ E QL +
Sbjct: 61 ETASRNISDATSMLQTADGALEELTTIANRQKELATQASNGVNSTADLKALDDEFKQLNA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ I +++ G N + IGS +
Sbjct: 121 EITRIVENTTYAGNNLFKDATDGVLVKGVTFQIGSDAAEKMSVTLGAIDKTVAGDLLTSA 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
++T L + + + +++
Sbjct: 181 AANTAIGAVDTFLAKVGTERSTLGANINRLGHTAANLASVTENTKAA 227
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 39/95 (41%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
A + +DT + +G+ +R+ + + + + GR++DAD A
Sbjct: 178 TSAAANTAIGAVDTFLAKVGTERSTLGANINRLGHTAANLASVTENTKAAAGRIMDADFA 237
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ES ++ Q Q LS N +T ++ L R
Sbjct: 238 VESANMTRNQLLVQAGTTVLSSANQNTGLVMGLLR 272
>gi|291619579|ref|YP_003522321.1| FliC [Pantoea ananatis LMG 20103]
gi|291154609|gb|ADD79193.1| FliC [Pantoea ananatis LMG 20103]
gi|327396705|dbj|BAK14126.1| flagellin FliC [Pantoea ananatis AJ13355]
Length = 311
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 3/147 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MSVINTNVLSLITQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGEAIANRFTSNIDGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQ+E+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALDEINNNLQRVRDLTVQAQNSSNSASDIDSIQAEVNQRMQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTAS 144
++ + + FNG L T GSST +
Sbjct: 121 EIDRDTKQTDFNGLKVLNTGSGSSTYN 147
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 36/87 (41%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ ID IK + +G+ +R + + R+ DAD A+E + +S
Sbjct: 225 LADIDKAIKAVDSQRSLLGASQNRFESTISNLNNTVTNLTAARSRIQDADYATEVSNMSR 284
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ L+ N +LSL R
Sbjct: 285 AQILQQAGSSVLAQANQVPQTMLSLLR 311
>gi|218562948|ref|YP_002344727.1| flagellin [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|9296976|sp|P56963|FLA1_CAMJE RecName: Full=Flagellin A
gi|112360654|emb|CAL35451.1| flagellin [Campylobacter jejuni subsp. jejuni NCTC 11168]
Length = 572
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 79/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + +
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGT 212
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + I + + V+ ++ D D
Sbjct: 476 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVD 535
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A++ N+ +L L +
Sbjct: 536 FAAESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ 572
>gi|86150126|ref|ZP_01068354.1| flagellin subunit protein FlaA [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|85839572|gb|EAQ56833.1| flagellin subunit protein FlaA [Campylobacter jejuni subsp. jejuni
CF93-6]
Length = 572
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 79/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + +
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGT 212
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + I + + V+ ++ D D
Sbjct: 476 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVD 535
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A++ N+ +L L +
Sbjct: 536 FAAESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ 572
>gi|120597315|ref|YP_961889.1| flagellin domain-containing protein [Shewanella sp. W3-18-1]
gi|146294540|ref|YP_001184964.1| flagellin domain-containing protein [Shewanella putrefaciens CN-32]
gi|120557408|gb|ABM23335.1| flagellin domain protein [Shewanella sp. W3-18-1]
gi|145566230|gb|ABP77165.1| flagellin domain protein [Shewanella putrefaciens CN-32]
Length = 270
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M + TN++++ A + N L +R+S+GLR++ A+D+AA IA M ++ +
Sbjct: 1 MLGVHTNYASIVAQGAVNKSNNLLTNAMERLSTGLRINSASDDAAGLQIANRMNANVKGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQS 117
S I +S + A + + + + K T D ++ E TQL +
Sbjct: 61 ETASRNISDATSMLQTADGALEELTTIANRQKELATQAANGVNSAADLTALNDEFTQLNA 120
Query: 118 QLRDIARGSSFNGENWLRT 136
++ I +++ G T
Sbjct: 121 EITRIVENTTYAGNKLFDT 139
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 40/95 (42%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ +DT ++ +G+ +R+ + + + + GR++DAD A
Sbjct: 176 TGGTANAAIALVDTFLETVGTERSTLGANINRLGHTAANLASVTENTKAAAGRIMDADFA 235
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ES ++ Q Q LS N +T ++ L R
Sbjct: 236 VESANMTRNQLLVQAGTTVLSSANQNTGLVMGLLR 270
>gi|117923391|ref|YP_864008.1| flagellin domain-containing protein [Magnetococcus sp. MC-1]
gi|117607147|gb|ABK42602.1| flagellin domain protein [Magnetococcus sp. MC-1]
Length = 271
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 73/178 (41%), Gaps = 3/178 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A +A ++L L +R+SSGLR++ A+D+AA +++ M + L+
Sbjct: 5 INTNIAASNAQRQLTKSTNALGKTYERLSSGLRINSASDDAAGLTVSSRMTAQIRGLNQS 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S V +A+ +++ + ++ TD + E+TQL +++
Sbjct: 65 ARNANDGISLVQVAEGALAETEAALQRMRELAVQAASGSYNNTDRSDLNDEVTQLVTEIT 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
I+ + FNG + + ++ A + + + L
Sbjct: 125 RISTDTKFNGVSLMSSNQTFDIQVGADVGQKITVSTQGAGASLLGVTTASITSAGLAS 182
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ID I + +G+ +R+ + + + + R++DAD
Sbjct: 175 ITSAGLASIAIGKIDAAIASVSDMRSVLGAQQNRLEAAITNLSNVSERTQAARSRIMDAD 234
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+A E+ L+ QQ L+ N +LSL R
Sbjct: 235 IAQETANLTKQSILQQAGAAMLAQANQQPQIMLSLLR 271
>gi|307265476|ref|ZP_07547031.1| flagellin domain protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919430|gb|EFN49649.1| flagellin domain protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 266
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + L N + V +++SSG R++ A D+AA +I++ M++ L+
Sbjct: 3 INHNLSALNAWRALSINTTNTQKVLEKLSSGYRINRAGDDAAGLAISEKMRAQIAGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG----VERGTDSKSIQSEITQLQSQL 119
G S + A+ +++ ++ ++ + + D ++IQ EI +L ++
Sbjct: 63 QRNAQDGISLIQTAEGALTETHAILQRMRELVVQAGNLGTNQSEDLQAIQDEINRLNEEI 122
Query: 120 RDIARGSSFNGENWLRTDLG 139
I++ + FNG+ L D
Sbjct: 123 TGISQRTQFNGKTLLNGDYS 142
Score = 86.7 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 40/122 (32%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
Y + + + + G + + ++ ++ +S ID I
Sbjct: 140 DYSTTALVFQIGANQGQQMSLTIGAMDASTLGVEGISVATFSTSADIDTALSAIDNAINT 199
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
++ +G+ +R+ + + + + + R+ D DMA + Q A
Sbjct: 200 VSSQRSALGATQNRLEHTINNLGVASENLTAAESRIRDVDMAKAMMEFTKDNILNQAATA 259
Query: 435 AL 436
L
Sbjct: 260 ML 261
>gi|91792672|ref|YP_562323.1| flagellin-like protein [Shewanella denitrificans OS217]
gi|91714674|gb|ABE54600.1| flagellin-like protein [Shewanella denitrificans OS217]
Length = 273
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 81/228 (35%), Gaps = 3/228 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M A + L + L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSMKAQKNLNISSGGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S IA+ M + +++ +++ D ++++E+ QL +++
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLAIQSENGANSADDLTALKAEMDQLVTEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I ++F + + G + T++
Sbjct: 124 TAIGNSTAFGNTKLMTGTFSTGKLFQVGHQEGEDVTVKVNTNNATSLSVGALTVLTSAGR 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
++ T+ + + + E +++ S +
Sbjct: 184 NSALTKIDAAIKKIDTQRAELGAVQNRLSHNISNSANTQANVADAKSR 231
Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 27/209 (12%), Positives = 56/209 (26%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + + + +A + D+ + + ++
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLAIQSENGANSADDLTALKAEMDQLVTEI 123
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
++ A + L E + +
Sbjct: 124 TAIGNSTAFGNTKLMTGTFSTGKLFQVGHQEGEDVTVKVNTNNATSLSVGALTVLTSAGR 183
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ ID IK ++G++ +R+ + V R+VD D A E+
Sbjct: 184 NSALTKIDAAIKKIDTQRAELGAVQNRLSHNISNSANTQANVADAKSRIVDVDFAKETAT 243
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q QQ L+ N LSL
Sbjct: 244 MTKNQVLQQTGSAMLAQANQLPQIALSLL 272
>gi|315649829|ref|ZP_07902912.1| flagellin-like protein [Paenibacillus vortex V453]
gi|315274803|gb|EFU38184.1| flagellin-like protein [Paenibacillus vortex V453]
Length = 277
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 89/226 (39%), Gaps = 3/226 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N S+ + ++L N +++SSG R++ AAD+AA +I++ M++ L
Sbjct: 3 INHNISSYNTQRQLTFNNTQQGKSLEKLSSGYRINRAADDAAGLAISEKMRNQIRGLEQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ G S + +A+ +++ ++ + G +D+ I SEI QL +Q+
Sbjct: 63 NKNALDGISLIQVAEGALNETHAMLQRMAELYVQGGNETLTTSDADKIDSEIAQLSAQID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG+ + D+ + + G I K T+ L +
Sbjct: 123 SIATQTQFNGKKLIAADVTGNLTFQVGANAGETITVALQKADAATLGVDFTSLGSLATTP 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
T+ T L I ++ D+ T++
Sbjct: 183 TNATANAALTKVQDAINDVSKIRSDLGAVQNRLEHTVNNLGTTAEN 228
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 45/138 (32%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + + + + ++ T + ++ + I
Sbjct: 140 VTGNLTFQVGANAGETITVALQKADAATLGVDFTSLGSLATTPTNATANAALTKVQDAIN 199
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G++ +R+ + + + ++ R+ D DMA E + + QQ A
Sbjct: 200 DVSKIRSDLGAVQNRLEHTVNNLGTTAENLQAAESRIRDVDMAKEMSTFTKNNILQQAAT 259
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +L L R
Sbjct: 260 AMLAQANQQPQGVLQLLR 277
>gi|120253|sp|P27053|FLAA_CAMCO RecName: Full=Flagellin A
gi|144195|gb|AAA23022.1| flagellin [Campylobacter coli]
Length = 573
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 95/279 (34%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANSDLNSRALDQSLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGGFTNQEFQIGSSSNQTIKASIGATQSSKIGVTRFETGSQSFSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T G + + + + I+ K + +K+ A
Sbjct: 185 TVGLTIKNYNGIEDFKFDSVVISTSVGTGLGALAEEINRNADKTGIRATFDVKSVGAYAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + + + G S +
Sbjct: 245 KAGNTSQDFAINGVVIGKVDYSDGDENGSLISAINAVKD 283
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 66/206 (32%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
I A G + + + + + G+ + S + +
Sbjct: 368 GQISAANADAMGFNAYNGGGAKQIIFASSIAGFMSQAGSGFSAGSGFSVGSGKNYSAILS 427
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+++ V + T + S ++ ++ H T ++
Sbjct: 428 ASIQIVSSARSISSTYVVSTGSGFSAGSGNSQFAALRISTVSAHDETAGVTTLKGAMAVM 487
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+T I IGS+ ++I + I + + V+ ++ D D ASES S
Sbjct: 488 DIAETAITNLDQIRADIGSVQNQITSTINNITVTQVNVKSAESQIRDVDFASESANYSKA 547
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q A++ N+S +L L +
Sbjct: 548 NILAQSGSYAMAQANSSQQNVLRLLQ 573
>gi|86146833|ref|ZP_01065152.1| flagellin [Vibrio sp. MED222]
gi|85835285|gb|EAQ53424.1| flagellin [Vibrio sp. MED222]
Length = 354
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/344 (12%), Positives = 100/344 (29%), Gaps = 3/344 (0%)
Query: 24 LEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSK 83
L +R++SG R++ A D+AA I+ +++ + G S + A+ M++
Sbjct: 2 LNQSLERLASGSRINSAKDDAAGLQISNRLEAQMSGIDVAVRNANDGISIMQTAEGAMNE 61
Query: 84 AIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGS 140
++M +++ + +IQ E+T L +L IA +SF G+ L GS
Sbjct: 62 TTNIMQRMRDLSLQATNGSNSQSERTAIQEEVTALNDELNRIAETTSFGGKKLLNGSFGS 121
Query: 141 STASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
S+ I S + + S + +
Sbjct: 122 SSFQIGGSSGEAVHIGLKNMRTDDINMGGFSYVANGMASDSWEVKSNQTDMTMAFTDRFG 181
Query: 201 QVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPN 260
Q + + T + + + + +
Sbjct: 182 QPQEININAKAGDDIEELATYINGQTDLVSASVNDEGQLQIYMSGEDTAGTISFSGSLAS 241
Query: 261 TTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDT 320
S ++G + T + + + T + S + + + ++
Sbjct: 242 ELSMSAGYYESVDDINVTDVGGAQRAVSILDTAMKYVDSHRSELGAMQNRFDHAINNLEN 301
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
L + K+ D + + + ++
Sbjct: 302 VHENLGASNSRIKDTDYAKETTQMLKQQILQQVSTTILAQAKQA 345
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/353 (9%), Positives = 94/353 (26%)
Query: 98 GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157
+ + + + S I + + + + + + + +
Sbjct: 1 MLNQSLERLASGSRINSAKDDAAGLQISNRLEAQMSGIDVAVRNANDGISIMQTAEGAMN 60
Query: 158 NGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI 217
+ + T +S ++ T + +
Sbjct: 61 ETTNIMQRMRDLSLQATNGSNSQSERTAIQEEVTALNDELNRIAETTSFGGKKLLNGSFG 120
Query: 218 STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASA 277
S+ ++ A + + + +
Sbjct: 121 SSSFQIGGSSGEAVHIGLKNMRTDDINMGGFSYVANGMASDSWEVKSNQTDMTMAFTDRF 180
Query: 278 TYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
+ N + + T G T+ A V + S + +
Sbjct: 181 GQPQEININAKAGDDIEELATYINGQTDLVSASVNDEGQLQIYMSGEDTAGTISFSGSLA 240
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
++ + + + VS +DT +K + ++G++ +R + ++
Sbjct: 241 SELSMSAGYYESVDDINVTDVGGAQRAVSILDTAMKYVDSHRSELGAMQNRFDHAINNLE 300
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + R+ D D A E+T++ Q QQ++ L+ + L+L
Sbjct: 301 NVHENLGASNSRIKDTDYAKETTQMLKQQILQQVSTTILAQAKQAPNLALTLL 353
>gi|325289236|ref|YP_004265417.1| flagellar hook-associated protein 3 [Syntrophobotulus glycolicus
DSM 8271]
gi|324964637|gb|ADY55416.1| flagellar hook-associated protein 3 [Syntrophobotulus glycolicus
DSM 8271]
Length = 458
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 59/443 (13%), Positives = 133/443 (30%), Gaps = 15/443 (3%)
Query: 6 TNHSAMSASQKLRDINYNL---EVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
TN M + IN NL +Q + SS ++ +D+ S + + S +
Sbjct: 4 TNT--MIIQNTIARINDNLVRLSKLQAQASSQKKIEVPSDDPVVASRSLKLTSYVAKIQQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
S + + + + D+++TI+ K D I +EI +L+S +
Sbjct: 62 QQKNAEDAGSWMTYTDSALEQIGDILTTIREKTVEAANGTLTAEDQAKILAEIEELESGI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+IA + + + +G I + + + + ++ L
Sbjct: 122 IEIANSAYGGRYVLAGYSTDEAPVEAVSTAVGDMITYNGKYLSLGGVVSASVSDSDLEAF 181
Query: 180 STDGTER-------YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
D + + N+ V + + + A
Sbjct: 182 YLDNMDHISGQAELTSAVFTNYTAASPALSFTVTLDGVSQTISLTDGTTYDPDSLAAALQ 241
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT 292
N+ F + G + + + T + + + A
Sbjct: 242 SGLNSAFPSSSGQVSPLIEVSQTGGKIVLTVQDGDRIAINSGTLEVSELGFADGMTSAAG 301
Query: 293 TKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANT 352
I G N V + + ++ L + T + +
Sbjct: 302 DSEEIRYKVGTNNWVTVNVEGSDVLGEGTDNLFNTLAKLKLALSGETQYKTAAYDQTSGV 361
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
E L + +++ +D I A ++G+ + + L + + + + + D
Sbjct: 362 SVVTEDLDLSGLLADLDDDINRVLVARAELGARTGYVELTQTRLDNNELTYTELLSQNDD 421
Query: 413 ADMASESTRLSALQTQQQLAVQA 435
AD+A S L++ Q + + A
Sbjct: 422 ADLAEVSIHLASAQAAYEATLAA 444
>gi|254456831|ref|ZP_05070259.1| flagellin B [Campylobacterales bacterium GD 1]
gi|207085623|gb|EDZ62907.1| flagellin B [Campylobacterales bacterium GD 1]
Length = 274
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN AM+A + N L+ + +SSGLR++ AAD++A +IA + + + L
Sbjct: 5 INTNIGAMNAHRNATMNNIGLDKSLNSLSSGLRINKAADDSAGLAIANKLSAQSQGLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
G + A + + +++ ++ D IQ E+T L ++
Sbjct: 65 VRNSNDGIGLIQTADGALEEYGNILKRVRVLAVQASNDTQDTTSRGYIQQEVTALLAEAD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
DIA + FNG L G++ A
Sbjct: 125 DIATTTKFNGTKILDGTGGTAGAFT 149
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 43/135 (31%)
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
+ ++ + + + + + E V+ +D I
Sbjct: 140 GTGGTAGAFTFHTGAYTTEVQTVTIGSAQAALIVSASSVSTRADAELAVAGMDVSIGRID 199
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
A +G+ +++ I + + + ++ D D A+ES + Q A+
Sbjct: 200 AKRATLGAAQNKLESTVRNISVTQVNIAAAESQIRDVDFAAESANFAKHNILAQSGSYAM 259
Query: 437 SIVNNSTARILSLFR 451
S N +L L +
Sbjct: 260 SQANAVQQNVLRLLQ 274
>gi|116326934|ref|YP_796654.1| flagellar hook-associated protein FlgL [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116332401|ref|YP_802119.1| flagellar hook-associated protein FlgL [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|116119678|gb|ABJ77721.1| Endoflagellar hook-filament protein [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116126090|gb|ABJ77361.1| Endoflagellar hook-filament protein [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 421
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/428 (8%), Positives = 102/428 (23%), Gaps = 28/428 (6%)
Query: 6 TNHSAMSAS-QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN ++ L N++ Q+++S+G R+ +D + +S L
Sbjct: 4 TNMMQNNSLIHNLNRHQLNMDETQNQLSTGQRIRLPSDEPGRATNQMFFRSRLNELDTFQ 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIAR 124
I G+S++ + + + + + ++ +I R
Sbjct: 64 RNIDDGNSRLQQIDGELDRIGSLFQRARVLAVQASNGIYQGDKGFELEVAIGKEIDEILR 123
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
T + + I +Q + D
Sbjct: 124 ALVDIANTRDATGRPLFGGHVIERPPFEPIESKIKGLQGIELKNQYIGVEYRGDIGEQLR 183
Query: 185 ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKG 244
E + + + G
Sbjct: 184 EIEKGEYIPVTVPGN---------------------------KVFWGTNMSITSKVDNSG 216
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
T S + + + + + + + +S +
Sbjct: 217 YVTSSDQKFKIDGVEIHVSAGDTIDDIIDKINNSPLEVKANKLAQDNISLSSTAPHQIWM 276
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
+ +T+ +G S+ + I + +++
Sbjct: 277 EDIEGGTILRDIGLVDSATSEPPNNYSKSATVTGLSVFDVMIQFRNDLIQKDQERISGRD 336
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ +D ++ +G+ +R+ + + + + + + D +
Sbjct: 337 LQDLDLAMENILRYRAVVGARMNRMEEHAQRVDFDKSYMTELLSKNEGIDFPETIMNMKW 396
Query: 425 LQTQQQLA 432
L+T Q A
Sbjct: 397 LETVHQYA 404
>gi|24374749|ref|NP_718792.1| flagellin [Shewanella oneidensis MR-1]
gi|24349413|gb|AAN56236.1|AE015761_6 flagellin [Shewanella oneidensis MR-1]
Length = 272
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/254 (13%), Positives = 87/254 (34%), Gaps = 3/254 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +++ A + L +L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSLKAQKNLNTSASDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S IA+ M + +++ +++ D ++++E+ QL +++
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQSENGANSSADLSALKAEMDQLANEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+I + ++F L + + G I+ +++ T
Sbjct: 124 DEIGKTTAFGTTKLLAGGFSAGKNFQVGAQDGEDIKVTVKASNKSSLSVGSLGNTTSAAR 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ + + + + +++ S + A +
Sbjct: 184 ASSLKKIDAAIKTIDAQRADLGAIQNRLAHNISNSANTQANVADAKSRIVDVDFAKETSQ 243
Query: 240 DQAKGIATIPVPLP 253
+
Sbjct: 244 MTKNQVLQQTGSAM 257
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 29/209 (13%), Positives = 58/209 (27%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + + + + + ++D+ + + ++
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQSENGANSSADLSALKAEMDQLANEI 123
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
T A + E + + + A
Sbjct: 124 DEIGKTTAFGTTKLLAGGFSAGKNFQVGAQDGEDIKVTVKASNKSSLSVGSLGNTTSAAR 183
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ ID IK A +G+I +R+ + V R+VD D A E+++
Sbjct: 184 ASSLKKIDAAIKTIDAQRADLGAIQNRLAHNISNSANTQANVADAKSRIVDVDFAKETSQ 243
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q QQ L+ N LSL
Sbjct: 244 MTKNQVLQQTGSAMLAQANQLPQVALSLL 272
>gi|126176146|ref|YP_001052295.1| flagellin domain-containing protein [Shewanella baltica OS155]
gi|304412498|ref|ZP_07394104.1| flagellin domain protein [Shewanella baltica OS183]
gi|307307157|ref|ZP_07586895.1| flagellin domain protein [Shewanella baltica BA175]
gi|125999351|gb|ABN63426.1| flagellin domain protein [Shewanella baltica OS155]
gi|304349140|gb|EFM13552.1| flagellin domain protein [Shewanella baltica OS183]
gi|306910396|gb|EFN40827.1| flagellin domain protein [Shewanella baltica BA175]
Length = 268
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 3/160 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M + TN++++ A + N L +R+S+GLR++ A+D+AA IA M ++ +
Sbjct: 1 MLGVHTNYASIVAQGAVNKSNNLLTNAMERLSTGLRINSASDDAAGLQIANRMSANVKGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQS 117
S I +S + A + + + + K T D ++ +E QL
Sbjct: 61 ETASRNISDATSMLQTADGALEELTTIANRQKELATQAANGVNSADDLTALDAEFQQLSL 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157
++ IA+ +++ G N G T I +
Sbjct: 121 EVDRIAKNTTYAGNNLFTAIDGGVTFQIGAGTSETMKVTS 160
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 48/131 (36%)
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
+ + + + ANT + ++ +D IK +
Sbjct: 138 TAIDGGVTFQIGAGTSETMKVTSAAPVALANTVKLDTGDNARLAITAVDDFIKTVGTSRS 197
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
+G+ +R+ + + + + GR++DAD A ES ++ Q Q LS N
Sbjct: 198 TLGANINRLGHTAANLASVTENTKAAAGRIMDADFAVESANMTRNQLLVQAGTTVLSSAN 257
Query: 441 NSTARILSLFR 451
+T ++ L R
Sbjct: 258 QNTGLVMGLLR 268
>gi|317154736|ref|YP_004122784.1| flagellin domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316944987|gb|ADU64038.1| flagellin domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 308
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 3/149 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N AM+A + L + L R+SSGLRV AAD+AA +I ++M+S+ +L
Sbjct: 3 LVINHNLMAMNAQRNLSEHYSRLGTSTRRLSSGLRVGTAADDAAGLAIRELMRSEISSLH 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQ 118
S + A + + + +K +S SE + S+
Sbjct: 63 QGIRNAADAISLIQTADGALQVIDEKLIRMKELAMQASTGTYNSDQRLIIDSEYQAMSSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAK 147
+ IA + FNG L +L + +
Sbjct: 123 INRIANATDFNGIYLLNGNLSGNPGTDHN 151
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 32/77 (41%)
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G++ +R+ +++ + ++ R+ D D+A E T Q Q AV
Sbjct: 232 DKIRANLGAMQNRLENTITNLEIQAENLQAAESRISDVDVAQEMTEFVRNQIMTQSAVAM 291
Query: 436 LSIVNNSTARILSLFRG 452
L+ N+ + L G
Sbjct: 292 LAQANSLPRMAMQLIGG 308
>gi|170791541|gb|ACB38412.1| flagellin A [Aeromonas molluscorum]
gi|170791563|gb|ACB38423.1| flagellin A [Aeromonas molluscorum]
gi|170791565|gb|ACB38424.1| flagellin A [Aeromonas molluscorum]
Length = 301
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 73/202 (36%), Gaps = 3/202 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + + +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNMMNSTKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D +++Q E+ QL +++
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSAKDREALQKEVDQLGAEVN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ ++F G L G + A + + TV S
Sbjct: 125 RISTATTFAGTKLLDGSFGGTFQVGADANQTIGFSLSQANGFSISGIAAAANTTVTAASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQV 202
+ +
Sbjct: 185 GTLAVDAIFANGTAAGGISIST 206
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 45/106 (42%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
A + + + + +++ +D+ + + ++G++ +R+ + + V
Sbjct: 195 NGTAAGGISISTQTNAQNVLAAVDSMLTVVDSKRAELGAVQNRLDSTIRNQANISENVSA 254
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ DAD A+E+ ++ QQ A L+ N LSL +
Sbjct: 255 ARSRIRDADFATETANMTKQNILQQAASSILAQANQRPQSALSLLQ 300
>gi|167838324|ref|ZP_02465183.1| flagellin [Burkholderia thailandensis MSMB43]
Length = 389
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 59/454 (12%), Positives = 129/454 (28%), Gaps = 68/454 (14%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQSALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A +G+S + + I+ +D+ ++Q E+ +
Sbjct: 61 NQGVSNANDGVSILQTASSGLSALTNSLQRIRQLAVQASNGPLSSSDAAALQKEVAVQIA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +A +++NG+N L G+ + + +V + D + I + L
Sbjct: 121 EVNRVASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVDLTQSMSAAKIGGGMVQSGQTL 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + G + + A
Sbjct: 181 GTIKVAVDSSGAAWTPGTSTGQETT--------------QINVLSDGKGGFTFTDQNNQA 226
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
A ++ + + + + + SA + +
Sbjct: 227 LSAGAVTSLFGSTTAGTGTSSAPAFQTLTLAAAGTSSLSAADQAAATAMVAQINAVNQPQ 286
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
T ++ + ST + + L + ++ T N
Sbjct: 287 TVSNLDISTQTGAYQAMVSIDNALSTVNNLQATLGAAQNRFTAIATTQQAGSNNLSQAQS 346
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ + D + A + +
Sbjct: 347 Q------IQNADFAQETANLSRAQ------------------------------------ 364
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
QQ + L+ N+ ++L L +
Sbjct: 365 ---------VLQQAGISVLAQANSLPQQVLKLLQ 389
>gi|56682611|gb|AAW21726.1| flagellin A [Aeromonas caviae]
gi|170791523|gb|ACB38403.1| flagellin A [Aeromonas caviae]
Length = 301
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/202 (17%), Positives = 72/202 (35%), Gaps = 3/202 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + + +L+ R++SGLR++ A D+AA I+ + S L
Sbjct: 5 INTNVSSLNAQRNMMNSTKSLDTSYTRLASGLRINSAKDDAAGLQISNRLTSQINGLDQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + ++ ++ D +++Q E+ QL +++
Sbjct: 65 NRNANDGISLAQTAEGAMDEVTGMLQRMRTLAQQSANGSNSAKDREALQKEVDQLGAEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ ++F G L + A + + TV S
Sbjct: 125 RISTATTFAGTKLLDGSFSGTFQVGADANQTISFSLSQANGFSISGIAAAANTTVTAASG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQV 202
+ +
Sbjct: 185 GTLAVDAIFTNGAAAGGISIST 206
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 43/97 (44%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + +++ +D+ + + ++G++ +R+ + + V R+ DAD
Sbjct: 204 ISTQTNAQNVLAAVDSMLTVVDSKRAELGAVQNRLDSTIRNQANISENVSAARSRIRDAD 263
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+E+ ++ QQ A L+ N LSL +
Sbjct: 264 FATETANMTKQNILQQAASSILAQANQRPQSALSLLQ 300
>gi|150260238|ref|ZP_01916966.1| lateral flagellin [Yersinia pestis CA88-4125]
gi|166008939|ref|ZP_02229837.1| lateral flagellin [Yersinia pestis biovar Antiqua str. E1979001]
gi|166212185|ref|ZP_02238220.1| lateral flagellin [Yersinia pestis biovar Antiqua str. B42003004]
gi|167466326|ref|ZP_02331030.1| putative flagellin [Yersinia pestis FV-1]
gi|218927923|ref|YP_002345798.1| putative flagellin [Yersinia pestis CO92]
gi|294502799|ref|YP_003566861.1| putative flagellin [Yersinia pestis Z176003]
gi|115346534|emb|CAL19411.1| putative flagellin [Yersinia pestis CO92]
gi|149289646|gb|EDM39723.1| lateral flagellin [Yersinia pestis CA88-4125]
gi|165992278|gb|EDR44579.1| lateral flagellin [Yersinia pestis biovar Antiqua str. E1979001]
gi|166206931|gb|EDR51411.1| lateral flagellin [Yersinia pestis biovar Antiqua str. B42003004]
gi|262360831|gb|ACY57552.1| putative flagellin [Yersinia pestis D106004]
gi|262364776|gb|ACY61333.1| putative flagellin [Yersinia pestis D182038]
gi|294353258|gb|ADE63599.1| putative flagellin [Yersinia pestis Z176003]
Length = 404
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 65/454 (14%), Positives = 132/454 (29%), Gaps = 55/454 (12%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN SA +A L + R+S+G R++ ADNAA I M+ +
Sbjct: 3 LSIHTNASAKTAINSLSNEGLANAKSSQRLSTGFRINSPADNAAGLQITNRMEKFLNSAG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
I + + IA G+++++ ++ +K T D ++IQ E ++L +
Sbjct: 63 QAKQNIQESIAMLQIADGGLAESVKTLNAMKKLATQAANDTNSAADREAIQKEFSELGKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L++ + +N E R + T + L + +
Sbjct: 123 LQNALNNTEYNSEKLFADGGKM--------------RKELNFQSGTDAESSLKLDLNSVI 168
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + L N E + L ++ DA T +T K T
Sbjct: 169 AELTESVTKPGLKANSGGTAEEKELARLEGLAKDAKSTAATTKSAETTLLVDDATGKGGK 228
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ + + + + ++ + W + +
Sbjct: 229 GGKGGNASIDIIIPAHKDTTGKDVAEKKIASGTAITPANITSMADAKAYWDKQEIETPKA 288
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ + D +
Sbjct: 289 VNEYVVKHSADSGVMNMQLADKDLAMK-------------------------------AD 317
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+ +++ A ++ S S+ + M + +G + D D A E
Sbjct: 318 KKLSDVIDAYGAFRATLGANQNRLQSSSNNLD-------NMISNTAQALGSIKDTDFADE 370
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + Q +V L N +T I +L +G
Sbjct: 371 MKNHAQSEMLMQSSVMMLKKANAATQLISTLLQG 404
>gi|206603513|gb|EDZ39993.1| Putative flagellin [Leptospirillum sp. Group II '5-way CG']
Length = 275
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 3/224 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N ++M+A L L R+SSG RV+ AD+ A ++I+Q M + + +A
Sbjct: 6 INDNIASMNAQYNLNRTQEALNKHIGRLSSGYRVNSPADDPAGYAISQRMGAQMMSYNAA 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKS---IQSEITQLQSQLR 120
G+ + A + ++ ++ K + E L S++
Sbjct: 66 IRNANDGAHLLQTANGALQTDNTILLKMRQLAIQAANSTYSEKDLKVLNQEYQHLNSEVT 125
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ + FNG L G+ + + N ++ + ++
Sbjct: 126 RIAKVTDFNGMRLLDGSHGTFKFHVGIYTSVNDRLSVNIGKMDSSTLGIRSTNILNRQNA 185
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
+ ++ + + + T +T +
Sbjct: 186 KNAVDKLDVALDRINSIQGGIGAIQNRMEWTIRNLTNATTNVQA 229
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/232 (11%), Positives = 53/232 (22%)
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
S + + L A A T + +A
Sbjct: 43 ADDPAGYAISQRMGAQMMSYNAAIRNANDGAHLLQTANGALQTDNTILLKMRQLAIQAAN 102
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
+ ++ + T + S
Sbjct: 103 STYSEKDLKVLNQEYQHLNSEVTRIAKVTDFNGMRLLDGSHGTFKFHVGIYTSVNDRLSV 162
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ T + + + V +D + + G IG+I +R+ +
Sbjct: 163 NIGKMDSSTLGIRSTNILNRQNAKNAVDKLDVALDRINSIQGGIGAIQNRMEWTIRNLTN 222
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
V+ + D + ASE+ + Q Q L+ N + L
Sbjct: 223 ATTNVQASRAGIKDVNFASETAAFTKRQILSQSGAAVLAQANLVPQAAIKLL 274
>gi|167623369|ref|YP_001673663.1| flagellin domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167353391|gb|ABZ76004.1| flagellin domain protein [Shewanella halifaxensis HAW-EB4]
Length = 273
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/228 (17%), Positives = 82/228 (35%), Gaps = 3/228 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M A + L + L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSMKAQKNLNTSSQGLATSMERLSSGLRINSAKDDAAGLAISNRLDSQVRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQL 119
S IA+ M + +++ +++ D SIQ EI L +++
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTIQASNGANSTDDIASIQKEIDALATEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I ++F L + + G I KV +++ T +
Sbjct: 124 TSIGNSTAFGNTKLLDGGFSAGKSFQVGHQKGEDISVKVSKVNSSSLAVGGLTLTNSANR 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+ T+ + + + +++ S +
Sbjct: 184 QSALTKIDAAIKTIDTQRADLGAVQNRLAHNISNSANTQANVADAKSR 231
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 28/209 (13%), Positives = 57/209 (27%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + + + + A+ DI +++ ++
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTIQASNGANSTDDIASIQKEIDALATEI 123
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
++ A + E S + +
Sbjct: 124 TSIGNSTAFGNTKLLDGGFSAGKSFQVGHQKGEDISVKVSKVNSSSLAVGGLTLTNSANR 183
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ ++ ID IK +G++ +R+ + V R+VD D A E+
Sbjct: 184 QSALTKIDAAIKTIDTQRADLGAVQNRLAHNISNSANTQANVADAKSRIVDVDFAKETAT 243
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q QQ L+ N LSL
Sbjct: 244 MTKNQVLQQTGSAMLAQANQLPQVALSLL 272
>gi|144201|gb|AAA23026.1| flagellin [Campylobacter coli]
Length = 573
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 95/279 (34%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANSDLNSRALDQSLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGGFTNQEFQIGSSSNQTIKASIGATQSSKIGVTRFETGSQSFSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T G + + + + I+ K + +K+ A
Sbjct: 185 TVGLTIKNYNGIEDFKFQNVVISTSVGTGLGALAEEINRNADKTGIRATFDVKSVGAYAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + + + G S +
Sbjct: 245 KAGNTSQDFAINGVVIGKVDYSDGDENGSLISAINAVKD 283
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 66/206 (32%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
I A G + + + + + G+ + S + +
Sbjct: 368 GQISAANADAMGFNAYNGGGAKQIIFASSIAGFMSQAGSGFSAGSGFSVGSGKNYSAILS 427
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+++ V + T + S ++ ++ H T ++
Sbjct: 428 ASIQIVSSARSISSTYVVSTGSGFSAGSGNSQFAALRISTVSAHDETAGVTTLKGAMAVM 487
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+T I IGS+ ++I + I + + V+ ++ D D ASES S
Sbjct: 488 DIAETAITNLDQIRADIGSVQNQITSTINNITVTQVNVKSAESQIRDVDFASESANYSKA 547
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q A++ N+S +L L +
Sbjct: 548 NILAQSGSYAMAQANSSQQNVLRLLQ 573
>gi|327540861|gb|EGF27422.1| flagellin domain protein [Rhodopirellula baltica WH47]
Length = 739
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/390 (11%), Positives = 117/390 (30%), Gaps = 6/390 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN S++ A +L N +L+ R+S+GL+++ A+++ A ++ ++++ L
Sbjct: 62 MTRINTNVSSLVAQNRLASSNNDLQQSLTRLSTGLQINKASEDPAGVLASEALRAEITGL 121
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS----KSIQSEITQLQ 116
+ S + A + + + ++++ I+ + G S + Q +I
Sbjct: 122 TKAISNTTRASQIISTADSALGQVGNLLNDIRGLVVEAANTGGLSSDEIAANQLQIDSSL 181
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTA--SIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
+ I++ ++F G L + + + + + G V ++ +
Sbjct: 182 EAINRISQTTTFQGRKLLDGSQDYVSTLSTTPGIADYAIDQANLGTVGSVDVEVNVAAAA 241
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
D S + LD + + + D+ I+ + +
Sbjct: 242 TKADISVNANAFDPPLDGDAVATSKLATNTYYHAVLNDSGIRITGDFESVQFIDDGSFNS 301
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A + + + + + VR
Sbjct: 302 LPAASINDGVLTLRYDSYDQPHSINMSANAINSLPGIEAHWEGGPFENTQQTGVVRPVHA 361
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA 354
+ N ++ + + ++ D + A
Sbjct: 362 GIEVARSDGGNIAISYTDSDQSATTASYDEQTNTVNIALGTDETSKGFVDIAQLVNDLPA 421
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
++ + V D + + + +
Sbjct: 422 LSDGTELTATVIDSDGEETTGPSQRLNLTA 451
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSR-IHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ ID + G++GS + + + + +++ V + DAD A
Sbjct: 645 TNDVHGAAKVIDEVMHKVVNMRGRLGSFQATTLQSSLVSLNETKANLQEAVSSISDADFA 704
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
ES L+ Q Q LS+ N + +LSL
Sbjct: 705 QESANLTRAQILVQSGTNVLSLANQNPRNVLSLL 738
>gi|46579852|ref|YP_010660.1| flagellin [Desulfovibrio vulgaris str. Hildenborough]
gi|120602682|ref|YP_967082.1| flagellin domain-containing protein [Desulfovibrio vulgaris DP4]
gi|46449268|gb|AAS95919.1| flagellin [Desulfovibrio vulgaris str. Hildenborough]
gi|120562911|gb|ABM28655.1| flagellin domain protein [Desulfovibrio vulgaris DP4]
gi|311234147|gb|ADP87001.1| flagellin domain protein [Desulfovibrio vulgaris RCH1]
Length = 298
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 68/201 (33%), Gaps = 3/201 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N AM+A++ L D L R+SSGLRV+ AAD+AA +I ++M++D L
Sbjct: 3 LVINHNMMAMNAARNLTDSYGRLATSTRRLSSGLRVNTAADDAAGLAIRELMRADISTLR 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K I+SE + S+
Sbjct: 63 QGIRNANDAISMIQTADGALQIIDEKLIRMKELAEQAATGTYNSDQRLMIESEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG + L L G+ YY++
Sbjct: 123 ITRIANATDFNGIHLLNGSLSGVHNGSVLQQSGALKIHFGTGNDSAEDYYYIEIGGATAS 182
Query: 179 SSTDGTERYGLLDRNHKIKVE 199
G +
Sbjct: 183 MLGLGNASALGTEAGGYTIST 203
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 60/203 (29%)
Query: 250 VPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
A + S+ ++A+ T I + + G
Sbjct: 96 AEQAATGTYNSDQRLMIESEYQAMASEITRIANATDFNGIHLLNGSLSGVHNGSVLQQSG 155
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ + + + + A + + A + ++ ID
Sbjct: 156 ALKIHFGTGNDSAEDYYYIEIGGATASMLGLGNASALGTEAGGYTISTQSAAQAALAAID 215
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
I +G++ +R+ + + + ++ R+ D D+A+E T Q
Sbjct: 216 QAIISKDKIRASLGALQNRLENTISNLSIQAENLQSSESRISDVDVATEMTEFVRNQILT 275
Query: 430 QLAVQALSIVNNSTARILSLFRG 452
Q AV LS N+ + L G
Sbjct: 276 QSAVAMLSQANSLPQMAMKLIGG 298
>gi|119899020|ref|YP_934233.1| flagellar hook-filament junction protein 3 [Azoarcus sp. BH72]
gi|119671433|emb|CAL95346.1| flagellar hook-filament junction protein 3 [Azoarcus sp. BH72]
Length = 420
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 54/432 (12%), Positives = 116/432 (26%), Gaps = 28/432 (6%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++ +L Q ++S+G RV AD+ + A + G S
Sbjct: 3 ISTNMIYDKGVGSMQQQWSSLLHTQQQLSTGRRVLTPADDPIASARALEVGQSKGVNSQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
G ++++ + ++ D + I+ K + G ++ ++ T L++Q +
Sbjct: 63 MTNTGYADDRLNLLENKLTGVGDTLQYIREKTVSAGNAGYSAEDLKYIATDLRAQFDGL- 121
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ G+ + + DY V
Sbjct: 122 -------LALANSQDGTGDYLFSGYRANAQPFSGGLAGVSYQGDYGTQTIQVSASRYMPV 174
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + + V V ++ T T
Sbjct: 175 SLPGTDVFAATRQIDDTLVQPSTGTHVDGSANTGGTTLSGT------------------- 215
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+A + T + + I +S+
Sbjct: 216 -LAPLASGAVDTSTLARRYEITYNAATGYDVYEYVPGNPSKVAIATGLADLSSLGDPASP 274
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
V N D + + ++ L + A+
Sbjct: 275 NYVGVNLQMNDAAGNPAVPGDGDRFELFVGSPNMFDNLGVLIDAMERPGPSGMAGGAVAF 334
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ +D ++ +IGS + + + + + LVD D S + L+
Sbjct: 335 GLTNLDGALENVLKVRAQIGSQLTETESLLNIGSDLDVQYAETISNLVDVDYVSAISNLT 394
Query: 424 ALQTQQQLAVQA 435
QT Q A Q+
Sbjct: 395 QQQTYLQAAQQS 406
>gi|16080568|ref|NP_391395.1| flagellin [Bacillus subtilis subsp. subtilis str. 168]
gi|221311465|ref|ZP_03593312.1| hypothetical protein Bsubs1_19021 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315792|ref|ZP_03597597.1| hypothetical protein BsubsN3_18937 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320707|ref|ZP_03602001.1| hypothetical protein BsubsJ_18900 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324992|ref|ZP_03606286.1| hypothetical protein BsubsS_19056 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|81555979|sp|O34366|YVZB_BACSU RecName: Full=Putative flagellin yvzB
gi|2636028|emb|CAB15520.1| putative flagellin [Bacillus subtilis subsp. subtilis str. 168]
Length = 160
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 37/95 (38%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + IDT I + K+G++ +R+ + + + + R+ D DMA
Sbjct: 66 ANTPFDTQLESIDTAINNVSNQRAKLGAVQNRLEHTINNLGASSENLTAAESRIRDVDMA 125
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + + Q + L+ N +L L R
Sbjct: 126 KEMSEFTKNNIPSQASQAMLAQANQQPQNVLQLLR 160
>gi|88596831|ref|ZP_01100068.1| flagellin subunit protein FlaA [Campylobacter jejuni subsp. jejuni
84-25]
gi|88191672|gb|EAQ95644.1| flagellin subunit protein FlaA [Campylobacter jejuni subsp. jejuni
84-25]
Length = 572
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 79/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + +
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGT 212
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + I + + V+ ++ D D
Sbjct: 476 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVD 535
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A++ N+ +L L +
Sbjct: 536 FAAESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ 572
>gi|127512288|ref|YP_001093485.1| flagellin domain-containing protein [Shewanella loihica PV-4]
gi|126637583|gb|ABO23226.1| flagellin domain protein [Shewanella loihica PV-4]
Length = 272
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 35/228 (15%), Positives = 81/228 (35%), Gaps = 3/228 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +++ A + L NL +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSLKAQKNLNASGSNLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQL 119
S I++ M + +++ +++ + +Q+ E+ L +++
Sbjct: 64 GMRNANDAISIAQISEGAMQEQTNMLQRMRDLSIQAENGANSTADLQALKDEMDALATEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I ++F L D + G I+ GK +
Sbjct: 124 TAIGTNTAFGDTKLLNGDFSAGKTFQVGHQDGEDIKVSVGKSDAAALSVNSLTVLTSAGR 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
++ T+ + + + + +++ S +
Sbjct: 184 ASALTKIDAAIKKIDTSRAKLGAVQNRLAHNISNSANTQANVADAKSR 231
Score = 99.8 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 29/209 (13%), Positives = 60/209 (28%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + + + ++ A +D+ +++ ++
Sbjct: 64 GMRNANDAISIAQISEGAMQEQTNMLQRMRDLSIQAENGANSTADLQALKDEMDALATEI 123
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ A D + E + N+
Sbjct: 124 TAIGTNTAFGDTKLLNGDFSAGKTFQVGHQDGEDIKVSVGKSDAAALSVNSLTVLTSAGR 183
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ ID IK + K+G++ +R+ + V R+VD D A E++
Sbjct: 184 ASALTKIDAAIKKIDTSRAKLGAVQNRLAHNISNSANTQANVADAKSRIVDVDFAKETSA 243
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q QQ L+ N LSL
Sbjct: 244 MTKNQVLQQTGSAMLAQANQLPQVALSLL 272
>gi|257456321|ref|ZP_05621518.1| flagellar filament 34.5 kDa core protein [Treponema vincentii ATCC
35580]
gi|257446407|gb|EEV21453.1| flagellar filament 34.5 kDa core protein [Treponema vincentii ATCC
35580]
Length = 285
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM A + + ++ +++SSG+R++ A D+A+ ++++ M+S L+
Sbjct: 3 INHNMSAMYAQRHTGIVETSIAKDIEKLSSGMRINRAGDDASGLAVSEKMRSQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
I G S + + +++ D+M ++ D IQ E++QL ++
Sbjct: 63 GQNIQNGVSFIQATEGYLAETTDIMQRMRELAVQAANGIYSAEDRMQIQVEVSQLVDEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
IA + FNG N L +A+
Sbjct: 123 RIASHAQFNGMNLLTGRFAKDSATG 147
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 41/132 (31%)
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + + + + + + ID +K
Sbjct: 154 GANMDQSEKLFVGTMTAMALGLAGGAQGGEGDMITISSVEGANMAIGTIDNALKQINKQR 213
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G+ +R L + + + + ++ R+ DADMA E + Q Q L+
Sbjct: 214 ADLGAYQNRFELAYNGVAIASENLQAAESRIRDADMAKEVVEYTKNQILMQSGTAMLAQA 273
Query: 440 NNSTARILSLFR 451
N ++ L +
Sbjct: 274 NTQPQSVVRLLQ 285
>gi|260598430|ref|YP_003211001.1| flagellin [Cronobacter turicensis z3032]
gi|260217607|emb|CBA31879.1| Flagellin [Cronobacter turicensis z3032]
Length = 278
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 82/216 (37%), Gaps = 3/216 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I TN +++ L L +R+SSGLR++ A D+AA +IA M S +
Sbjct: 1 MSVINTNLLSLTTQTNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRMTSQVKGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQS 117
+ + G S V A+ +++ + I+ S SI +EITQ S
Sbjct: 61 TQAARNANDGISLVQTAEGNLNEINTNLQRIRELAVQAANDTNGSTDLTSINTEITQRLS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA G++FNG+ L + ++ + S + ++
Sbjct: 121 EIDRIAGGANFNGKKLLDGSVSTALKIQVGAGTSSNDTISIDSNALINATSGTLDSSLST 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ + T + + + I ++
Sbjct: 181 SIADNSTAQAVISAADAAIAKIDTARSNMGAIQNRF 216
Score = 77.5 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 33/76 (43%)
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
A +G+I +R + + + + R+ DAD A+E + +S Q QQ
Sbjct: 203 DTARSNMGAIQNRFESTINNLNNSINNLSAAQSRIQDADYATEVSNMSRAQILQQAGTSV 262
Query: 436 LSIVNNSTARILSLFR 451
LS N +LSL R
Sbjct: 263 LSQANQVPQSMLSLLR 278
>gi|320538526|ref|ZP_08038387.1| putative flagellin [Treponema phagedenis F0421]
gi|320144633|gb|EFW36388.1| putative flagellin [Treponema phagedenis F0421]
Length = 289
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM A ++ + +++SSG+R++ A D+A+ ++++ M+S L+
Sbjct: 7 INHNMSAMFAQRQGGINGALIVKDIEKLSSGMRINRAGDDASGLAVSEKMRSQIRGLNQA 66
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
I G S + + +++ D++ ++ D IQ E++QL ++
Sbjct: 67 GQNIQNGVSFIQATEGYLAETTDIVQRLRELAIQAANGIYSAEDRMQIQVEVSQLVDEVD 126
Query: 121 DIARGSSFNGENWLRTDLGSST 142
IA + FNG N L G ++
Sbjct: 127 RIASQAQFNGMNLLTGRFGRNS 148
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 44/132 (33%)
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + + + +V + + + + +D +K
Sbjct: 158 GANMDQNEKIFIGTMTAIALGIVGEAQGGEDEMISMSTVDGANKAIGSLDNALKTINKQR 217
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G+ +R + + I + + ++ R+ D DMA E + QQ + L+
Sbjct: 218 ADLGAYQNRFEMAYNGIAIAAENLQAAESRIRDTDMAKEIVDYTKNNILQQSTMAMLAQA 277
Query: 440 NNSTARILSLFR 451
N IL L +
Sbjct: 278 NTQPQAILRLMQ 289
>gi|225374764|ref|ZP_03751985.1| hypothetical protein ROSEINA2194_00384 [Roseburia inulinivorans DSM
16841]
gi|225213333|gb|EEG95687.1| hypothetical protein ROSEINA2194_00384 [Roseburia inulinivorans DSM
16841]
Length = 284
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 38/262 (14%), Positives = 93/262 (35%), Gaps = 3/262 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N +A +A++ L +++SSG +++ AAD+AA +I++ M+S L+
Sbjct: 16 VVQHNMTAANANRMLGITTSAQAKSSEKLSSGYKINRAADDAAGLTISEKMRSQVRGLNK 75
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
SD G S + +A+ + + ++ + T D +IQ E+ QL S++
Sbjct: 76 ASDNAEDGVSLIQVAEGALGETHSILQRMNELATQAANDTNTTADRTAIQKEVDQLASEI 135
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I + FN N L + + + + + L +
Sbjct: 136 SRIRSTTQFNTMNLLDGNFATKNLQVGSLCGQKITVSIDDMSATSLGVNALKVTSFTDAG 195
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + + + + ++ ++ + + + + T+
Sbjct: 196 AAMKSVQSAISMVSGQRSYLGALQNRLEHTIANLDNISENTQSAESRIRDTDMAEEMVTY 255
Query: 240 DQAKGIATIPVPLPAAPAAPNT 261
+ +A + A
Sbjct: 256 SKNNILAQAGQSMLAQANQSTQ 277
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 37/110 (33%)
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ N + + + I + +G++ +R+ + + +
Sbjct: 175 DMSATSLGVNALKVTSFTDAGAAMKSVQSAISMVSGQRSYLGALQNRLEHTIANLDNISE 234
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ R+ D DMA E S Q L+ N ST +LSL +
Sbjct: 235 NTQSAESRIRDTDMAEEMVTYSKNNILAQAGQSMLAQANQSTQGVLSLLQ 284
>gi|238756758|ref|ZP_04618012.1| Flagellin [Yersinia ruckeri ATCC 29473]
gi|238705023|gb|EEP97486.1| Flagellin [Yersinia ruckeri ATCC 29473]
Length = 185
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 66/181 (36%), Gaps = 3/181 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQGSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 61 TQAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L ++ + + + +
Sbjct: 121 EINRVTKQTDFNGIKVLDNRTAANAEYAFQVGSQDAQKINIEIGSSAGWNLATAGAGGTS 180
Query: 178 D 178
Sbjct: 181 S 181
>gi|298346038|ref|YP_003718725.1| putative flagellin [Mobiluncus curtisii ATCC 43063]
gi|298236099|gb|ADI67231.1| possible flagellin [Mobiluncus curtisii ATCC 43063]
Length = 407
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 3/137 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN A++A + L R+SSG R++ AAD+++ ++ Q +++
Sbjct: 129 SITTNIMALNAYRHNASAVQLLHQSLQRLSSGKRINSAADDSSGLALVQGLRTQVLGNRQ 188
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
G S A + D++ ++ G I +E+ ++ ++
Sbjct: 189 AIKNAQDGISLTQTADGVLDAVHDMLQRMRQLAVKGANDTYSLRARVQIGAEMDAIRVEI 248
Query: 120 RDIARGSSFNGENWLRT 136
I + + G L
Sbjct: 249 GRIGQATEAMGRRILGG 265
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 44/111 (39%)
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
+ + + + + A + + ID QI+ + A +G++ +R + + +
Sbjct: 294 DVTDIAKNQIGHIPQDADHAAFQRSLENIDDQIQVISGARAALGAVQNRFAHTINHLNVS 353
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + R+ D DMA+ES Q + LS ++ IL L
Sbjct: 354 VENLCAAQSRMQDVDMAAESMNYMRGLILNQSSRAVLSQALSAPRGILRLL 404
>gi|119469959|ref|ZP_01612764.1| flagellin [Alteromonadales bacterium TW-7]
gi|119446669|gb|EAW27942.1| flagellin [Alteromonadales bacterium TW-7]
Length = 322
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 75/208 (36%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN SA++A ++L +L+ R+SSGLR++ AAD+AA I+ ++S L+
Sbjct: 5 VNTNVSAINAQRQLERSGGDLDTSFKRLSSGLRINSAADDAAGLQISDRLQSQILGLNQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ M + I+ D +IQ EI QL ++
Sbjct: 65 NRNANDGISLAQTAEGAMDEITSTFQRIRTLAQQASNGSNTDEDRLAIQEEIRQLSDEVN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++F G+N L +S A +V + TI +
Sbjct: 125 RIATDTTFGGQNLLDGTYSASFQIGADAVQTIGFSMQDVGGSANTISANGGFTMSGIAGI 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ I
Sbjct: 185 ASAVAGKSMSTFAAGISEIGSGSITAAT 212
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 31/261 (11%), Positives = 73/261 (27%)
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
+ T + ++ + + + +
Sbjct: 62 NQGNRNANDGISLAQTAEGAMDEITSTFQRIRTLAQQASNGSNTDEDRLAIQEEIRQLSD 121
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
A T G + A+ + + S + T++ +
Sbjct: 122 EVNRIATDTTFGGQNLLDGTYSASFQIGADAVQTIGFSMQDVGGSANTISANGGFTMSGI 181
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
V +S + + S + + A + + + +++ + +D
Sbjct: 182 AGIASAVAGKSMSTFAAGISEIGSGSITAATASFTSMVAAEISVSTQANAQQVFAGMDAM 241
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I ++G++ +R + + + R+ DAD A E+ L+ Q QQ
Sbjct: 242 IAVVDKKRAELGAVQNRFQSTIRNQANVSENLSAAKSRIKDADFAMETANLTKNQILQQA 301
Query: 432 AVQALSIVNNSTARILSLFRG 452
+ L N LSL +G
Sbjct: 302 SQTILGQANQRPQAALSLLQG 322
>gi|28372344|dbj|BAC56997.1| flagellin [Campylobacter jejuni]
Length = 575
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 79/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 64 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 124 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGGRISTSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + +
Sbjct: 184 EVQFTLKNYNGIDDFQFQKVVISTSVGT 211
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + I + + V+ ++ D D
Sbjct: 479 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVD 538
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ASES S Q A++ N+ +L L +
Sbjct: 539 FASESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ 575
>gi|124516727|gb|EAY58235.1| putative flagellin [Leptospirillum rubarum]
Length = 275
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 3/224 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N ++M+A L L R+SSG RV+ AD+ A ++I+Q M + + +A
Sbjct: 6 INDNIASMNAQYNLNRTQEALNKHIGRLSSGYRVNSPADDPAGYAISQRMGAQMMSYNAA 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKS---IQSEITQLQSQLR 120
G+ + A + ++ ++ K + E L S++
Sbjct: 66 IRNANDGAHLLQTANGALQTDNTILLKMRQLAIQAANSTYSEKDLKVLNQEYQHLNSEVT 125
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ + FNG L G+ + + N ++ + ++
Sbjct: 126 RIAKVTDFNGMRLLDGSHGTFKFHVGIYTSINDRLTVNIGKMDSSTLGIRSTNILNRQNA 185
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
+ ++ + + + T +T +
Sbjct: 186 KNAVDKLDVALDRINAIQGGIGAIQNRMEWTIRNLTNATTNVQA 229
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/232 (11%), Positives = 53/232 (22%)
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
S + + L A A T + +A
Sbjct: 43 ADDPAGYAISQRMGAQMMSYNAAIRNANDGAHLLQTANGALQTDNTILLKMRQLAIQAAN 102
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
+ ++ + T + +
Sbjct: 103 STYSEKDLKVLNQEYQHLNSEVTRIAKVTDFNGMRLLDGSHGTFKFHVGIYTSINDRLTV 162
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ T + + + V +D + A G IG+I +R+ +
Sbjct: 163 NIGKMDSSTLGIRSTNILNRQNAKNAVDKLDVALDRINAIQGGIGAIQNRMEWTIRNLTN 222
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
V+ + D + ASE+ + Q Q L+ N + L
Sbjct: 223 ATTNVQASRAGIKDVNFASETAAFTKRQILSQSGAAVLAQANLVPQAAIKLL 274
>gi|119469957|ref|ZP_01612762.1| putative flagellar synthesis; flagellar regulon; hook-associated
protein [Alteromonadales bacterium TW-7]
gi|119446667|gb|EAW27940.1| putative flagellar synthesis; flagellar regulon; hook-associated
protein [Alteromonadales bacterium TW-7]
Length = 410
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 49/450 (10%), Positives = 111/450 (24%), Gaps = 48/450 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N S+ + + N+ Q++V++ RV A+D+ A S A +
Sbjct: 3 LSNNLMYQSSLNSILNNQQNVSKAQEQVNTQKRVLTASDDPAAASRALQYTDRIQSNEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S I + +S+++I + + + D + + EI LQS +
Sbjct: 63 SKNITMLNSRLNIEEGALENIKSALERAHTLTIQSGNGVYSAADREGLAEEIKALQSTVL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
D+ + +G+ ++ S G ++ + + I +D ++
Sbjct: 123 DLMNSKTEDGKYIFSGYQDNTQTYSLDSSTGLYVYGGDQGQHMIKIAEGVDIKSSDNGFD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
L ++ V +
Sbjct: 183 AFEKVDARLDVVSNDGVVSGGITSS----------------------------------- 207
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
S + G+ + + + +
Sbjct: 208 -----KVYVTEQGQFDTFHKQNYNPDPSAAAGANTLNVITTAGSPNTYQIEQAGTILATG 262
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + + KE + + +
Sbjct: 263 NINDSVIKFAGMEISVTPVATGQIDITLEAPKKENVLNSMSELIAGLTNPALTEEEFEQV 322
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + + I + +G + + + LVD D+ T
Sbjct: 323 IADSLVQISNAKNNVSLTQAGLGGRINTAEKVLQSNTDLDINNKSARSDLVDIDITEAIT 382
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
L+ +T Q S LSLF
Sbjct: 383 ELTKQETALQA-----SQATFGRLANLSLF 407
>gi|163783304|ref|ZP_02178297.1| flagellin [Hydrogenivirga sp. 128-5-R1-1]
gi|159881412|gb|EDP74923.1| flagellin [Hydrogenivirga sp. 128-5-R1-1]
Length = 525
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 57/521 (10%), Positives = 135/521 (25%), Gaps = 73/521 (14%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAY-------WSIAQIMKSD 56
I N+SA L+ N + R+S+GLR+ +AAD++A ++ ++
Sbjct: 5 INFNYSAAVTQTALQTNNRLMNKSLLRLSTGLRILNAADDSAGLFIADQLAVVSAGLEQG 64
Query: 57 NGALSAVSDAIGLGSSKVDI-----------AKAGMSKAID-----VMSTIKNKITAGVE 100
N + A+ + + A+ + D + N + +E
Sbjct: 65 NRNIQTGISALQIAENSAGQIYNKLKEIYVKAENAANDINDPNARAALQREINNLIDAIE 124
Query: 101 R-------------GTDSKSIQSEITQLQSQLRDI------------------------- 122
+ + + Q+ +
Sbjct: 125 KIGRDTEYNGIKLLDGTFTNKYIHYGARKDQVISVNIDSVLPKDLGAYIVKGQGAIYTSG 184
Query: 123 -----ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN-------GKVQITTIDYYL 170
++F D G V+ + L
Sbjct: 185 AVSVGTFSANFTSATNWVVDSGDYVDVAGIRVLSYDGTRRFVDAKSLADAINTNKDLQAL 244
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
E ++++ G + V + + F++ S
Sbjct: 245 GIEAQAKNTNSASNSFTGFANFWSTTGSTATVSQVTLDFYIGNKDITGSSDFQVTIDSNI 304
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVR 290
+ A A G A + + + +
Sbjct: 305 TSLNQLVEAINTQASAAGVDIKAKAVDGKLVLETGGGETIAVDVAVSGTDLSQGATVNLS 364
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
+ + + + + + ++ + + V+ ++
Sbjct: 365 QILEGASDITVSTNTNNYFYIDVGEIDIAGVESYNVNQSGVSASNEGFNFDVSTATAKNL 424
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
N + + EE + + I+ +IG++ + + D K+ D + +
Sbjct: 425 NAVSVLTNASAEEALLILKKAIQRVDIVRSEIGAVMNNLQTIYDAQKVAMDNTNEAENVI 484
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D + E + + LQ + Q V L+ N +L L R
Sbjct: 485 RNVDFSKEMSTFTTLQIRMQSGVAMLAQANTLPQLVLQLLR 525
>gi|114054891|gb|ABI50045.1| FlaA [Clostridium botulinum]
Length = 247
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 62/159 (38%), Gaps = 3/159 (1%)
Query: 26 VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAI 85
+++ SGLR++ A D+AA +I++ M+ L S S + A+ +++
Sbjct: 3 KSMEKLXSGLRINRAGDDAAGLAISEKMRGQIRGLDQASRNSQDSISLIQTAEGALTETH 62
Query: 86 DVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSST 142
++ ++ G D +I++EIT+L +++ I++ + FN + L
Sbjct: 63 SILQRMRELAVQGANDTNVTADRAAIKTEITELNNEINRISQQTEFNTQKLLSGGFKDKN 122
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I + + T + + +
Sbjct: 123 FQIGANKAQTIKLTIGDMSAKTLGVSGVSVSDASKATDS 161
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 41/112 (36%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 136 TIGDMSAKTLGVSGVSVSDASKATDSIATIDKALGTVSTERAKLGANQNRLEHTINNLNT 195
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ ++ R+ D DMA E S Q A L+ N + +L L
Sbjct: 196 SSENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLL 247
>gi|156933470|ref|YP_001437386.1| hypothetical protein ESA_01288 [Cronobacter sakazakii ATCC BAA-894]
gi|156531724|gb|ABU76550.1| hypothetical protein ESA_01288 [Cronobacter sakazakii ATCC BAA-894]
Length = 278
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 81/216 (37%), Gaps = 3/216 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I TN +++ L L +R+SSGLR++ A D+AA +IA M S +
Sbjct: 1 MSVINTNLLSLTTQTNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRMTSQVKGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQS 117
+ + G S V A+ +++ + I+ S SI +EITQ S
Sbjct: 61 TQAARNANDGISLVQTAEGNLNEINTNLQRIRELAVQAANDTNGSTDLTSINTEITQRLS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA G++FNG+ L + ++ + S + +
Sbjct: 121 EIDRIAGGANFNGKKLLDGSVSTALKIQVGAGTSSNDTISIDSNALINATSGTLDSALST 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ + + + + + I ++
Sbjct: 181 SIADNSSAQAVISAADAAIAKIDTARSNMGAIQNRF 216
Score = 77.5 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 33/76 (43%)
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
A +G+I +R + + + + R+ DAD A+E + +S Q QQ
Sbjct: 203 DTARSNMGAIQNRFESTINNLNNSINNLSAAQSRIQDADYATEVSNMSRAQILQQAGTSV 262
Query: 436 LSIVNNSTARILSLFR 451
LS N +LSL R
Sbjct: 263 LSQANQVPQSMLSLLR 278
>gi|15639855|ref|NP_219305.1| flagellar filament 31 kDa core protein (flaB3) [Treponema pallidum
subsp. pallidum str. Nichols]
gi|189026093|ref|YP_001933865.1| flagellar filament 31 kDa core protein [Treponema pallidum subsp.
pallidum SS14]
gi|4033708|sp|P21992|FLAB3_TREPA RecName: Full=Flagellar filament 31 kDa core protein; AltName:
Full=Class B
gi|3323184|gb|AAC65835.1| flagellar filament 31 kDa core protein (flaB3) [Treponema pallidum
subsp. pallidum str. Nichols]
gi|189018668|gb|ACD71286.1| flagellar filament 31 kDa core protein [Treponema pallidum subsp.
pallidum SS14]
gi|291060230|gb|ADD72965.1| flagellin [Treponema pallidum subsp. pallidum str. Chicago]
Length = 285
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM A ++ + +++SSG R++ A D+A+ ++++ M+S L+
Sbjct: 3 INHNMSAMFAQRQGGINGLAIAKNIEKLSSGYRINRAGDDASGLAVSEKMRSQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
I G S + + +++ +++ ++ D IQ E++QL ++
Sbjct: 63 GQNIQNGISFIQATEGYLAETTEIVQRLRELAIQAANGIYSAEDRMQIQVEVSQLVDEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTA 143
IA + FNG N L +A
Sbjct: 123 RIASQAQFNGMNLLTGRFSRESA 145
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 48/132 (36%)
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + + + S + T + + + +++ +D+ +K
Sbjct: 154 GANMDQNEKIFINTMTASALGFFSDEGTDGSRSISIATVDGANKVIGTLDSALKEINKQR 213
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G+ +R I + + ++ R+ DAD+A + + Q +Q + L+
Sbjct: 214 ADLGAYQNRFETAYQGIAIAAENLQAAESRIRDADLAQQMVDYTKNQILEQSTMAMLAQA 273
Query: 440 NNSTARILSLFR 451
N +L L +
Sbjct: 274 NTQPQAVLRLMQ 285
>gi|326796587|ref|YP_004314407.1| flagellin domain protein [Marinomonas mediterranea MMB-1]
gi|326547351|gb|ADZ92571.1| flagellin domain protein [Marinomonas mediterranea MMB-1]
Length = 286
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 3/157 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN S+++A +L L+ R+SSGLR++ A+D+AA I+ + S L+
Sbjct: 5 VNTNTSSLNAQNQLTKTGSTLDTAYQRLSSGLRINSASDDAAGLQISNRLTSQVNGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
G S A+ + + +++ ++ D ++Q EITQL +++
Sbjct: 65 VRNANDGISLAQTAEGALDETTNMLQRMRTLAVQSANGSNTDEDRSALQEEITQLATEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157
+A ++F G+N L A +
Sbjct: 125 RVATDTTFGGQNLLDGTYDGQFQVGADANQTISFSLS 161
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 47/101 (46%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
A+T + + + +++ +D I + ++G++ +R + + + + V R
Sbjct: 185 ASTISISAASLAQSVITQVDNMIAAVDSKRAELGAVQNRFSSTINNLSNISENVSAARSR 244
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ DAD A+E+ L++ Q QQ + L+ N LSL
Sbjct: 245 VRDADFATETATLTSAQILQQASSTILAQANQRPQTALSLL 285
>gi|119775442|ref|YP_928182.1| flagellin-like protein [Shewanella amazonensis SB2B]
gi|119767942|gb|ABM00513.1| flagellin-like protein [Shewanella amazonensis SB2B]
Length = 273
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 38/228 (16%), Positives = 82/228 (35%), Gaps = 3/228 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M A + L + L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSMKAQKNLNMSSGQLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S IA+ M + +++ +++ D ++IQ EITQL +++
Sbjct: 64 GMRNANDGISIAQIAEGAMQEQTNMLQRMRDLSIQAENGANSADDLQAIQDEITQLITEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I ++F + D + G + T++
Sbjct: 124 TAIGNSTAFGNTKLMTGDFSAGKKFQVGHQEGEDVTITVNTNNATSLSVNAVTVLTSAGR 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
++ + + + + +++ S +
Sbjct: 184 NSSLLKIDNAIKKIDTQRAALGAVQNRLAHNISNSANTQANVADAKSR 231
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/209 (13%), Positives = 55/209 (26%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + + + ++ A D+ + ++
Sbjct: 64 GMRNANDGISIAQIAEGAMQEQTNMLQRMRDLSIQAENGANSADDLQAIQDEITQLITEI 123
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
++ A D + E + + N
Sbjct: 124 TAIGNSTAFGNTKLMTGDFSAGKKFQVGHQEGEDVTITVNTNNATSLSVNAVTVLTSAGR 183
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ ID IK +G++ +R+ + V R+VD D A E++
Sbjct: 184 NSSLLKIDNAIKKIDTQRAALGAVQNRLAHNISNSANTQANVADAKSRIVDVDFAKETSA 243
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q QQ L+ N LSL
Sbjct: 244 MTKNQVLQQTGSAMLAQANQLPQVALSLL 272
>gi|326939373|gb|AEA15269.1| flagellin [Bacillus thuringiensis serovar chinensis CT-43]
Length = 381
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + M+ +++ +++ + ++ E L+ Q+
Sbjct: 63 ANNTQDGMSLIRTADSAMNSVSNILLRMRDISNQSANGTNTDKNQSALDKEFAALKDQID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
I++ + FN + L S
Sbjct: 123 YISKNTEFNDQKLLDGSKKSIAIQT 147
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 36/363 (9%), Positives = 81/363 (22%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
+ K + S+ + + S G T G S A S
Sbjct: 19 NQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADS 78
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ S I+ + E K +D
Sbjct: 79 AMNSVSNILLRMRDISNQSANGTNTDKNQSALDKEFAALKDQIDYISKNTEFNDQKLLDG 138
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
S + + A + + + +
Sbjct: 139 SKKSIAIQTLDNADTNKQIDIQLSNVSTKELKLDTLSIEGSSSKTFTITADDMLAVGTAN 198
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ A + A T + +
Sbjct: 199 ATAKAKAGTLKGLNVTTGDLTAAKTDVQDFRAAFDKVKGFMGSTEVTNIEKALTKFDGDQ 258
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ L T + ++ ID ++ + +G+ +R
Sbjct: 259 SLANAKAIGDALTSDLATTIAKDQTYSKNVSNASSAIASIDAALESIASNRATLGATLNR 318
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + +K ++ ++ DADMA E + ++ + + + LS N + +
Sbjct: 319 LDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSK 378
Query: 449 LFR 451
L +
Sbjct: 379 LLQ 381
>gi|327394252|dbj|BAK11674.1| flagellar biosynthesis FliC [Pantoea ananatis AJ13355]
Length = 301
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 70/184 (38%), Gaps = 3/184 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNTLSLVTQNNLTKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFSSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ +++ + + +++ D SIQ+E+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALTEVNNNLQRVRDLTVQAQNSSNSASDIDSIQAEVNQRME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L T GSST + + T
Sbjct: 121 EINRVTKQTDFNGIKVLNTGSGSSTYNFQVGAKDGETIGITISASNGFNLFNTSGATSQT 180
Query: 178 DSST 181
T
Sbjct: 181 TGQT 184
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 59/207 (28%)
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
+A + + + + G + + +
Sbjct: 95 TVQAQNSSNSASDIDSIQAEVNQRMEEINRVTKQTDFNGIKVLNTGSGSSTYNFQVGAKD 154
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
T+ + + +T+ + + + I+ + +
Sbjct: 155 GETIGITISASNGFNLFNTSGATSQTTGQTINGNARTTAAEGFDVLSGTVTSGGSTDGAP 214
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ ID IK +G+ +R + + R+ DAD A+E + +S
Sbjct: 215 LADIDAAIKAVDNQRSLLGASQNRFESTISNLNNTVTNLTAARSRIQDADYATEVSNMSR 274
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ L+ N +LSL R
Sbjct: 275 AQILQQAGSSVLAQANQVPQTMLSLLR 301
>gi|253688947|ref|YP_003018137.1| flagellin domain protein [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251755525|gb|ACT13601.1| flagellin domain protein [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 288
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 73/198 (36%), Gaps = 3/198 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++ L L +R+SSGLR++ A D+AA +IA M + +
Sbjct: 1 MAVINTNIMSLTTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRMTAQIKGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ +++ + + I+ T D SI E+TQ +
Sbjct: 61 TQAARNANDGISLTQTAEGNLNEINNNLQRIRELATQAANDPNGKTDRDSIVKEMTQRIN 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +A+ +SFNG L + + GS + V
Sbjct: 121 EVNRVAQSASFNGTKLLDGSASAGIIIQVGANTGSTETITIDSTALINATTGGSMSDVSD 180
Query: 178 DSSTDGTERYGLLDRNHK 195
++ G G
Sbjct: 181 KITSLGAVATGSSANAAA 198
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 49/137 (35%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ T + S + + A + A + +++ +DT +
Sbjct: 152 NTGSTETITIDSTALINATTGGSMSDVSDKITSLGAVATGSSANAAAQALITSLDTALSA 211
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
A +G+I +R + + + R+ DAD A+E + +S Q QQ
Sbjct: 212 VDTARSNLGAIQNRFSSTITNLNNSINNLSSARSRIEDADYATEVSNMSRSQILQQAGTS 271
Query: 435 ALSIVNNSTARILSLFR 451
LS N +LSL R
Sbjct: 272 VLSQANQVPQTVLSLLR 288
>gi|167949778|ref|ZP_02536852.1| flagellin [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 272
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/248 (15%), Positives = 79/248 (31%), Gaps = 1/248 (0%)
Query: 9 SAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
+++A + L +L R+SSGLRV+ A D+AA + M +D L+ +
Sbjct: 1 MSLNAQRNLSSTQNDLAKSLQRLSSGLRVNSAKDDAAGLYQIEKMTADIRGLNQATRNAA 60
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG-TDSKSIQSEITQLQSQLRDIARGSS 127
G S A+ + + + + I+ D +Q E+ QL ++ I + +
Sbjct: 61 DGISLGQTAEGALGQIANNLQRIREIAVQSSNATVEDRTGLQKEVDQLTQEISRIVQTTE 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
FNG + L S + + T ++ S+
Sbjct: 121 FNGTSLLSATASMSFQVGQDGKASHQVSVKTIDLTSLNAYASSLTATGTINVSSASAASA 180
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
L + I+ + + + L+ + + + D T
Sbjct: 181 ELSTASTGIENDITSVAQNRATFGAVQNRFEAVISNLSNYAENLTASRSRIQDADFAAET 240
Query: 248 IPVPLPAA 255
+
Sbjct: 241 AALTKTQI 248
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 61/201 (30%)
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
L + S + T ++ + + T G + +
Sbjct: 72 ALGQIANNLQRIREIAVQSSNATVEDRTGLQKEVDQLTQEISRIVQTTEFNGTSLLSATA 131
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ D +++ S K + + Y+ + A + + I+
Sbjct: 132 SMSFQVGQDGKASHQVSVKTIDLTSLNAYASSLTATGTINVSSASAASAELSTASTGIEN 191
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
I G++ +R + + + R+ DAD A+E+ L+ Q QQ
Sbjct: 192 DITSVAQNRATFGAVQNRFEAVISNLSNYAENLTASRSRIQDADFAAETAALTKTQILQQ 251
Query: 431 LAVQALSIVNNSTARILSLFR 451
V LS N L+L +
Sbjct: 252 AGVSILSQANVVPQSALALLQ 272
>gi|332299029|ref|YP_004440951.1| flagellin domain protein [Treponema brennaborense DSM 12168]
gi|332182132|gb|AEE17820.1| flagellin domain protein [Treponema brennaborense DSM 12168]
Length = 286
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 74/201 (36%), Gaps = 3/201 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N SAM + + N + +++SSG++++ A D+A+ ++++ M+S L+
Sbjct: 2 VINHNMSAMFSQRTTNATNGATQKNMEKLSSGMKINRAGDDASGLAVSEKMRSQVRGLNQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
+ G S + + + + D++ I+ D IQ E++ L +++
Sbjct: 62 AATNAQNGISFIQTTEGYLQETTDIVQRIRELAVQSSNGIYTDEDRMQIQVEVSSLVAEV 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FNG N L + N + + + L +
Sbjct: 122 DRIASTAQFNGMNMLTGRFARQAGDNTVTASMWLHIGANMDQRSQVFIGTMTATALNLRN 181
Query: 180 STDGTERYGLLDRNHKIKVEP 200
D + + +
Sbjct: 182 FGDESIISLESPDSANRAIGT 202
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 38/95 (40%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + +D +K +G+ +R+ + + + ++ R+ D DMA
Sbjct: 192 SPDSANRAIGTLDEALKTINKQRADLGAYQNRLEYTVTGLSIGSENLQAAESRIRDTDMA 251
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + Q QQ L+ N ST +LSL +
Sbjct: 252 KEMVDFTKNQVLQQAGTAMLAQANQSTQSVLSLLK 286
>gi|304390203|ref|ZP_07372157.1| flagellin [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|304326685|gb|EFL93929.1| flagellin [Mobiluncus curtisii subsp. curtisii ATCC 35241]
Length = 407
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 3/137 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN A++A + L R+SSG R++ AAD+++ ++ Q +++
Sbjct: 129 SITTNIMALNAYRHNASAVQLLHQSLQRLSSGKRINSAADDSSGLALVQGLRTQVLGNRQ 188
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
G S A + D++ ++ G I +E+ ++ ++
Sbjct: 189 AIKNAQDGISLTQTADGVLDAVHDMLQRMRQLAVKGANDTYSLRARVQIGAEMDAIRVEI 248
Query: 120 RDIARGSSFNGENWLRT 136
I + + G L
Sbjct: 249 GRIGQATEAMGRRILGG 265
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 44/111 (39%)
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
+ + + + + A + + ID QI+ + A +G++ +R + + +
Sbjct: 294 DVTDIAKNQIGHIPQDADHAAFQRSLENIDDQIQVISGARAALGAVQNRFAHTINHLNVT 353
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + R+ D DMA+ES Q + LS ++ +L L
Sbjct: 354 VENLCAAQSRMQDVDMAAESMNYMRGLILNQSSRAVLSQALSAPRGVLRLL 404
>gi|114054885|gb|ABI50042.1| FlaA [Clostridium botulinum]
Length = 256
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 62/159 (38%), Gaps = 3/159 (1%)
Query: 26 VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAI 85
+++SSGLR++ A D+AA +I++ M+ L S S + A+ ++
Sbjct: 11 KSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQASRNSQDSISLIQTAEGAXTETH 70
Query: 86 DVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSST 142
++ ++ G D +I++EIT+L +++ I++ + FN + L
Sbjct: 71 SILQRMRELAVQGANDTNVTADRAAIKTEITELNNEINRISQQTEFNTQKLLSGGFKDKN 130
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I + + T + + +
Sbjct: 131 FQIGANKAQTIKLTIGDMSAKTLGVSGVSVSDASKATDS 169
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 42/113 (37%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 144 TIGDMSAKTLGVSGVSVSDASKATDSIATIDKALGTVSTERAKLGANQNRLEHTINNLNT 203
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ R+ D DMA E S Q A L+ N + +L L R
Sbjct: 204 SSENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLLR 256
>gi|294828508|ref|NP_714488.2| flagellar hook-associated protein FlgL [Leptospira interrogans
serovar Lai str. 56601]
gi|293386361|gb|AAN51506.2| flagellar hook-associated protein FlgL [Leptospira interrogans
serovar Lai str. 56601]
Length = 421
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/428 (8%), Positives = 101/428 (23%), Gaps = 28/428 (6%)
Query: 6 TNHSAMSAS-QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN ++ L N++ Q+++S+G R+ +D + +S L
Sbjct: 4 TNMMQNNSLIHNLNRHQLNMDETQNQLSTGQRIRLPSDEPGRATNQMFFRSRLNELETFQ 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIAR 124
I G+S++ + + + + + ++ +I R
Sbjct: 64 RNIDDGNSRLQQIDGELDRIGSLFQRARVLAVQASNGIYQGDKGFELEVAVGKEIDEILR 123
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
T + + I +Q + D
Sbjct: 124 ALVDIANTRDATGRPLFGGHVIERPPFEPIESKIKGLQGIELKNQYIGVEYRGDIGEQLR 183
Query: 185 ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKG 244
E I + + G
Sbjct: 184 EIEKGEYVPVTIPGN---------------------------KVFWGTNMSITSKVDNSG 216
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
S + + + + + + + +S +
Sbjct: 217 YVVSSDQKFKIDGVEIHVSAGDTIDDIIDKINNSPLEVKANKLAQDNISLSSTAPHQIWM 276
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
+ +T+ +G S+ + I + +++
Sbjct: 277 EDVEGGTILRDIGLVDSATSEPPNNYSKSATVTGLSVFDVMIQFRNDLIQKDQERISGRD 336
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ +D ++ +G+ +R+ + + + + + + D +
Sbjct: 337 LQDLDLAMENILRYRAIVGARMNRMEEHAQRVDFDKSYMTELLSKNEGIDFPETIMNMKW 396
Query: 425 LQTQQQLA 432
L+T Q A
Sbjct: 397 LETVHQYA 404
>gi|227820866|ref|YP_002824836.1| putative flagellin B [Sinorhizobium fredii NGR234]
gi|227339865|gb|ACP24083.1| putative flagellin B [Sinorhizobium fredii NGR234]
Length = 306
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 87/205 (42%), Positives = 112/205 (54%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AMSA + LR I N+E Q RVSSGLRV +A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNIAAMSALETLRSIGSNMETTQGRVSSGLRVGEASDNAAYWSIATTMRSDNMAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG++KVD A AGM AI+V+ IK K+ E G D +Q EI QLQ QL
Sbjct: 61 SAVQDALGLGAAKVDTAYAGMESAIEVVKEIKAKVVTATEEGVDKAKVQEEIDQLQEQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SF+GENW+ G++ ++ V S +D + D
Sbjct: 121 SIAESASFSGENWIGGVAGNTVTVVSGFVRASDSTVSVKTTSYALVDGVTGGNLLFSDDG 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
T + + +
Sbjct: 181 TGALDTATGILGTAGASAGGYDVYS 205
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/130 (42%), Positives = 76/130 (58%)
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
S D I ++ + M +++S +D + T+AA +
Sbjct: 177 SDDGTGALDTATGILGTAGASAGGYDVYSLDISALATADMNDVLSDVDDALSAMTSAAAE 236
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+GSIS RI LQEDF+ + D+++ GVGRLVDADM ESTRL ALQTQQQLAVQ+LSI N+
Sbjct: 237 LGSISMRIGLQEDFVAKLSDSIDSGVGRLVDADMNEESTRLKALQTQQQLAVQSLSIANS 296
Query: 442 STARILSLFR 451
++ +L LFR
Sbjct: 297 NSENVLQLFR 306
>gi|32473113|ref|NP_866107.1| flagellin [Rhodopirellula baltica SH 1]
gi|32397792|emb|CAD73793.1| flagellin [Rhodopirellula baltica SH 1]
Length = 739
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 44/390 (11%), Positives = 116/390 (29%), Gaps = 6/390 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN S++ A +L N +L+ R+S+GLR++ A+++ A + ++++ L
Sbjct: 62 MTRINTNVSSLVAQNRLASSNNDLQQSLTRLSTGLRINKASEDPAGVLASGALRAEITGL 121
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS----KSIQSEITQLQ 116
+ S + A + + + ++++ I+ + G S + Q +I
Sbjct: 122 TKAISNTTRASQIISTADSALGQVGNLLNDIRGLVVEAANTGGLSSDEIAANQLQIDSSL 181
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTA--SIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
+ I++ ++F G L + + + + + G + ++ +
Sbjct: 182 EAINRISQTTTFQGRKLLDGSQDYVSTLSTTPGIADYAIDQANLGTLGSVDVEVNVAAAA 241
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
D S + LD + + + D+ I+ + +
Sbjct: 242 TKADISVNANAFDPPLDGDAVATSKLATNTYYHAVLNDSGIRITGDFESVQFIDDGSFNS 301
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A + + + + + VR
Sbjct: 302 LPAASINDGVLTLRYDSYDQPHSINMSANAINSLPGIEAHWEGGPFENTQQTGVVRPVHA 361
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA 354
+ N ++ + + ++ D + A
Sbjct: 362 GIEVARSDGGNIAISYTDSDQSATTASYDEQTNTVNIALGTDETSKGFVDIAQLVNDLPA 421
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
++ + V D + + + +
Sbjct: 422 LSDGTELTATVIDSDGEETTGPSQRLNLTA 451
Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSR-IHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ ID + G++GS + + + + +++ V + DAD A
Sbjct: 645 TNDVYGAAKVIDEVMHKVVNMRGRLGSFQATTLQSSLVSLNETKANLQEAVSSISDADFA 704
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
ES L+ Q Q LS+ N + +LSL
Sbjct: 705 QESANLTRAQILVQSGTNVLSLANQNPRNVLSLL 738
>gi|242278565|ref|YP_002990694.1| flagellin domain protein [Desulfovibrio salexigens DSM 2638]
gi|242121459|gb|ACS79155.1| flagellin domain protein [Desulfovibrio salexigens DSM 2638]
Length = 291
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 72/181 (39%), Gaps = 3/181 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N AM+AS+ L++ NL V R+SSGLRV AAD+AA +I ++M++D +L+
Sbjct: 3 LVINHNLMAMNASRNLQESYGNLGVSTRRLSSGLRVGTAADDAAGLAIRELMRADIKSLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K T I SE + S+
Sbjct: 63 QGIRNANDAISMIQTADGALGVIDEKLIRMKELATQAATGTYNSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG + L ++ + G YY+ T
Sbjct: 123 ITRIANATDFNGIHLLNGNVSGDHSGAGVRSTGKVKVHFGTGNDSAEDYYYIAIGTSTAS 182
Query: 179 S 179
+
Sbjct: 183 A 183
Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 39/98 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +E + + I +G++ +R+ + + + V+ R+ D D
Sbjct: 194 ISTQALAQESLDKLQNAIISKDKIRANLGALQNRLENTITNLSIQAENVQASESRISDVD 253
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+A+E T + Q Q AV LS N + L G
Sbjct: 254 VATEMTEFTRNQILTQSAVAMLSQANGMPRMAMQLIGG 291
>gi|327538663|gb|EGF25315.1| flagellin [Rhodopirellula baltica WH47]
Length = 687
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 66/150 (44%), Gaps = 4/150 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN S++ A +L+ N +L+ R+S+GLR++ +D+ A ++ ++ + L
Sbjct: 1 MTRINTNVSSLVAQNRLQSSNNDLQQSLTRLSTGLRINTGSDDPAGLLASEALRGEITGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS----KSIQSEITQLQ 116
+ S + A + + + ++++ ++ + G S + Q +I
Sbjct: 61 TKSISNTQRASQIISTADSALGQVSNLLNDVRGLVVEAANSGALSKEEIAANQLQIDSSL 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIA 146
+ IA+ ++F G L + +
Sbjct: 121 EAINRIAQTTTFQGRKLLDGSQDFVSTASG 150
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/384 (12%), Positives = 97/384 (25%), Gaps = 10/384 (2%)
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSS 127
G + A+ N + SE L L + A S+
Sbjct: 312 QTGLTVTATAEGA---------EYNNVTVQFASGAATAADYDSEQKILTVTLEEGAEISA 362
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
+ E + + S + D + ++ +
Sbjct: 363 ADLETLINGATVDGETPAEAAFEASALADSEFNGSTAIESASTGNTGGEVLNADLVFQLS 422
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
G I +V S + A + + +A I+
Sbjct: 423 GSGGAETFNFGAGTSKDQIAAAVNLVSDSTGVTADATAALAFSSSDYGSAALVDIDVISE 482
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
+G + + + + + + +
Sbjct: 483 GAGGTFKGSLDNTRATGADIVATVNGVEANGSGNGLSINTSSLDLNLTVDDGSSTNFSFS 542
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
+ G T ++T + + + + + A + +E
Sbjct: 543 ITGGGATFQLGPDVTSTQQASLGIGSVSTGQLGGASGRLYELGSGQAKSLTNDVEGAAKV 602
Query: 368 IDTQIKCATAAAGKIGSISSR-IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
ID I G++GS S + + + +++ + DAD A ES L+ Q
Sbjct: 603 IDEVIGKVVGLRGRLGSFQSTTLESNLVSLNETKANLQEAESSIRDADFAQESANLTRAQ 662
Query: 427 TQQQLAVQALSIVNNSTARILSLF 450
Q LS+ N + +LSL
Sbjct: 663 ILVQSGTNVLSLANQNPRNVLSLL 686
>gi|89902484|ref|YP_524955.1| flagellin-like protein [Rhodoferax ferrireducens T118]
gi|89347221|gb|ABD71424.1| flagellin-like [Rhodoferax ferrireducens T118]
Length = 410
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 62/457 (13%), Positives = 136/457 (29%), Gaps = 58/457 (12%)
Query: 1 MTSILTNHSAMS----ASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSD 56
MTS LT + + A + L L +Q+ ++SG +V A+D+ + A+ +
Sbjct: 1 MTSSLTRLGSANTYDNALRNLSMRQSALSNLQENLTSGKKVVRASDDPTGAAQAERAMTR 60
Query: 57 NGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEIT 113
++ A+ + + +A+ + D + + + + + KSI ++
Sbjct: 61 ISRIATDQRALEAQRNSIAMAEGTLGDVTDALQNFRELVVSAGNGVLTSAERKSITIQLQ 120
Query: 114 QLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE 173
L+ Q+ +A NG+ + + + + Q + + +
Sbjct: 121 GLRDQVFSLANRKDSNGQPLFSALGSALAPFVGPNAPPQDYAFNGLPGQSASSEVAIPFA 180
Query: 174 TVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233
+ T R G+ + + ++ A+ S + T+ A
Sbjct: 181 LDGDSAFMLQTNRDGVYNVSLGSGTTNLKTGPATLNPPTAATGASYTISFTSVTAAAGNT 240
Query: 234 AANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATT 293
A+ + A + + T S ++
Sbjct: 241 TASYDIVDSGSGAAVATGTKTYSTGQSFTVTEMPGLSLTI-------------------- 280
Query: 294 KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD 353
T + T+ + + + + +
Sbjct: 281 --------------------------TGTPTVADTVKVESSPSLFSVLDDAISSIGSASS 314
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
A+ + + ID + +A G+ G + +R + +E R D
Sbjct: 315 NATASQAVSQALGNIDIGMGRVSAVRGQAGDLLNRADRITSNQEARSIQLEADRSRAEDL 374
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
DM QT Q A+Q+ + V LSLF
Sbjct: 375 DMVKGIADFQNQQTGYQAALQSYAQVQK-----LSLF 406
>gi|27127335|dbj|BAC44987.1| flagellin [Campylobacter coli]
Length = 574
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 94/279 (33%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 64 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 124 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ K + ++
Sbjct: 184 EVQFTLKNYNGIDDFQFQKVVISTSVGTGLGALADEINKNADKTGVRATFTVETRGMAAV 243
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + G + S S
Sbjct: 244 RAGTTSDTFAINGVKIGKVAYEDGDANGALVSAINSVKD 282
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + I + + V+ ++ D D
Sbjct: 478 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVD 537
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A++ N+ +L L +
Sbjct: 538 FAAESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ 574
>gi|315639196|ref|ZP_07894359.1| flagellin A [Campylobacter upsaliensis JV21]
gi|315480751|gb|EFU71392.1| flagellin A [Campylobacter upsaliensis JV21]
Length = 298
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 81/208 (38%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANSDLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQASTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I S + + ++ S
Sbjct: 125 NIANTTSFNGKQLLSGGFINQEFQIGSSSNQTVKATIGATQSSKIGLTRFETGQQVIKSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
T + ++ +
Sbjct: 185 TANMTIKNYNGIDDFKFQAVKISTSVGT 212
>gi|297583334|ref|YP_003699114.1| flagellar hook-associated protein 3 [Bacillus selenitireducens
MLS10]
gi|297141791|gb|ADH98548.1| flagellar hook-associated protein 3 [Bacillus selenitireducens
MLS10]
Length = 436
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 44/431 (10%), Positives = 122/431 (28%), Gaps = 18/431 (4%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
A S+ + L +L +QD++++G +++ A+ + ++ +
Sbjct: 7 MMASSSLRHLHQSYQSLTNLQDQLATGKKITRASQDPVIAMNGMRYRTQVAETDQFKRNL 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIAR 124
+ +D + A + + + ++ +I E+ QL QL I+
Sbjct: 67 SEVYNWMDTSDATLDQGTQALHRVRELTVQASNDSYDSGQRANIAKEVDQLLEQLLSISN 126
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ N + T+ ++ ++ G + + +D T
Sbjct: 127 TKNNNKYIFNGTNTTNAPVDQSRMDYGVTQIAEGADIDAADVDLIFRGATYHALEEVPDD 186
Query: 185 ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKG 244
+ ++ + + V + + + S + +
Sbjct: 187 LPEQVREQLLNDGSIIEDPDNPGEYVINTGDNRQLFQHTASNRSDQVIAINQSDGIPNND 246
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
+ G + + N + ++ +
Sbjct: 247 RIRQYALSRNENGDLVNSQGERVNDPADADVNNARRIPENQAVISLKDAVSTNQENVNIE 306
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
K+ + + L R A D + EM
Sbjct: 307 ILKGVKLPVNVDPKNVFTNELFGDMIA---------------LREALEDPSTSAGDLSEM 351
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ ID I ++G+ +R+ + + ++ + ++ + DA+M T + +
Sbjct: 352 LDVIDHHINNFVDERAELGARVNRVEMVDQRVQQQQVIAQRIMSDNEDAEMERVITEMLS 411
Query: 425 LQTQQQLAVQA 435
+ + A+ A
Sbjct: 412 QENVHRAALSA 422
>gi|6694396|gb|AAF25214.1|AF202168_1 chimeric flagellin A/B [Campylobacter jejuni]
Length = 576
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 77/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANSDLNAKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFTNQEFQIGASSNQTVKATIGATQSSKIGVTRFETGAQSFTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
G + +
Sbjct: 185 VVGLTIKNYNGIEDFKFDNVVISTSVGT 212
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/328 (11%), Positives = 81/328 (24%)
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F + S+I + + + D D
Sbjct: 249 TSQDFAINGVTIGKIEYKDGDGNGSLISAINAVKDTTGVQASKDENGKLVLTSADGRGIK 308
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + V IS + + ++ +
Sbjct: 309 ITGDIGVGSGILANQKENYGRLSLVKNDGRDINISGTNLSAIGMGTTDMISQSSVSLRES 368
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A G + SA G+ + S +
Sbjct: 369 KGQISATNADAMGFNSYKGGGKFVFTQNVSSISAFMSAQGSGFSRGSGFSVGSGKNLSVG 428
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + +T + S ++ T T
Sbjct: 429 LSQGIQIISSAASMSNTYVVSAGSGFSSGSGNSQFAALKTTAANTTDETAGVTTLKGAMA 488
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ +T I IGSI +++ + I + + V+ ++ D D ASES S
Sbjct: 489 VMDIAETAITNLDQIRADIGSIQNQVTSTINNITVTQVNVKAAESQIRDVDFASESANYS 548
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A++ N+S +L L +
Sbjct: 549 KANILAQSGSYAMAQANSSQQNVLRLLQ 576
>gi|237753123|ref|ZP_04583603.1| flagellin b [Helicobacter winghamensis ATCC BAA-430]
gi|229375390|gb|EEO25481.1| flagellin b [Helicobacter winghamensis ATCC BAA-430]
Length = 525
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 3/177 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A N N+ +++SSGLR++ AAD+A+ +IA ++S AL
Sbjct: 5 IYTNVNALNAHTSGIVNNRNMANSLEKLSSGLRINKAADDASGMAIADSLRSQAAALGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + I ++ TIK K T + T ++QS+I +L +L
Sbjct: 65 TRNANDAIGIIQTADKAMDEQIKILDTIKTKATQAAQDGQTTTTRNALQSDILRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+IA +SFNG+ L + I + + L
Sbjct: 125 NIANTTSFNGQQMLSGAFTNKEFQIGAYSNTTVKASIQPTNSHKIGHVRYETGGDLA 181
>gi|255597978|ref|XP_002536899.1| conserved hypothetical protein [Ricinus communis]
gi|223518176|gb|EEF25483.1| conserved hypothetical protein [Ricinus communis]
Length = 195
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 71/182 (39%), Gaps = 3/182 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I TN ++++A + L +L R+SSGLR++ A D+AA +IA M S +
Sbjct: 3 SVINTNLASLNAQRNLTASQSSLNTSIQRLSSGLRINSAKDDAAGMAIATRMDSQVRGMD 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
+ S + A+ G+S A D + ++ D ++ +E +QL+S+
Sbjct: 63 VATRNANDAISFLQTAEGGLSSATDALQRMRELAVQAANGSYSSGDRANLDTEFSQLKSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L + + FNG+ + + I + +D
Sbjct: 123 LTRLGTATKFNGQAAFGAGYNFQIGADSGDTISVASVSAASLSGSLSSADAASDAITAID 182
Query: 179 SS 180
+
Sbjct: 183 AQ 184
>gi|283850853|ref|ZP_06368139.1| flagellin domain protein [Desulfovibrio sp. FW1012B]
gi|283573776|gb|EFC21750.1| flagellin domain protein [Desulfovibrio sp. FW1012B]
Length = 297
Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 69/181 (38%), Gaps = 3/181 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N AM+AS+ L + L R+SSGLR++ A+D+AA +I ++M+SD L+
Sbjct: 3 LVINHNMMAMNASRNLSNSYGALATSTRRLSSGLRITTASDDAAGLAIRELMRSDISTLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K I SE + S+
Sbjct: 63 QGVRNANDAISMIQTADGALQVVDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG L +L S ++ G + DYY
Sbjct: 123 ITRIAMATDFNGIYLLNGNLSSGIHDGNSLTPSGKLKVHFGTGNSSAEDYYYVQIGNSTA 182
Query: 179 S 179
S
Sbjct: 183 S 183
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 47/135 (34%)
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
S+ D + V L + + + ++ + I I
Sbjct: 163 GTGNSSAEDYYYVQIGNSTASALGVGLAAGTGRAGRSISTQELAQKALDAITAAIVSKDK 222
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G++ +R+ +++ + ++ ++ D D+ASE T Q Q AV LS
Sbjct: 223 IRANLGALQNRLENTISNLQIQAENLQSAESQISDVDVASEMTEFVRQQILTQSAVAMLS 282
Query: 438 IVNNSTARILSLFRG 452
N+ + L G
Sbjct: 283 QANSLPKMAMQLISG 297
>gi|153843836|ref|ZP_01993597.1| polar flagellin B/D [Vibrio parahaemolyticus AQ3810]
gi|149745286|gb|EDM56537.1| polar flagellin B/D [Vibrio parahaemolyticus AQ3810]
Length = 289
Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 41/107 (38%)
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
+T +E V+ ID +K + ++G+ +R + + + + V
Sbjct: 182 DKKNVTVDTIDVTSVGGAQESVAIIDAALKYVDSHRAELGAFQNRFNHAISNLDNINENV 241
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R+ D D A E+T ++ Q Q + L+ + LSL
Sbjct: 242 NASKSRIKDTDFAKETTAMTKSQILSQASSSILAQAKQAPNSALSLL 288
>gi|238916207|ref|YP_002929724.1| flagellin [Eubacterium eligens ATCC 27750]
gi|238871567|gb|ACR71277.1| flagellin [Eubacterium eligens ATCC 27750]
Length = 284
Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats.
Identities = 41/262 (15%), Positives = 97/262 (37%), Gaps = 3/262 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N SAM+ ++++ + L+ +++SSG +++ A D+AA SI++ M+S L+
Sbjct: 16 VVQHNLSAMNTNRQMGVVTSALQKSTEKLSSGYKINRAGDDAAGLSISEKMRSQIRGLNK 75
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
SD G S + +A+ +++ ++ + T TD +I++EI QL S++
Sbjct: 76 ASDNAQDGISLIQVAEGALNETHSILQRMNELATQAANDTNTSTDRTAIKAEIDQLTSEI 135
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I + FN +N L + + + T L +
Sbjct: 136 NRIQSTTQFNTQNLLDGKFTGKNLQVGSLKGQTIKISISNMNAKTLGVSGLTVDKNSTAG 195
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + + + ++ ++ + T + + +
Sbjct: 196 VSMSKIQAAIDKVSTQRSNLGALQNRLEHTINNLDTTSENTSAAESRIRDTDMADEMVQY 255
Query: 240 DQAKGIATIPVPLPAAPAAPNT 261
+ +A + A
Sbjct: 256 SKNNILAQAGNSMLAQANQQTQ 277
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 35/96 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +S I I + +G++ +R+ + + + R+ D D
Sbjct: 188 VDKNSTAGVSMSKIQAAIDKVSTQRSNLGALQNRLEHTINNLDTTSENTSAAESRIRDTD 247
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA E + S Q L+ N T +LSL
Sbjct: 248 MADEMVQYSKNNILAQAGNSMLAQANQQTQGVLSLL 283
>gi|48374858|gb|AAL57341.2|AF399739_1 flagellin [Pseudomonas fluorescens]
Length = 283
Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats.
Identities = 36/233 (15%), Positives = 82/233 (35%), Gaps = 3/233 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA IA M S +
Sbjct: 3 LTVNTNVTSLNVQKNLNKASDALSTSMTRLSSGLKINSAKDDAAGLQIATRMTSQIRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ + ++ +++ ++ D ++ E Q+ +
Sbjct: 63 VAIKNANDGISIAQTAEGALQESTNILQRMRELAVQARNDSNGTADRDALNKEFAQMSDE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA ++ NG+N + G+ T + + + +D + +
Sbjct: 123 LTRIAESTNLNGKNLIDGSAGTMTFQVGSNTGATNQITLTLDSGFDAATLSVDSAAIAIT 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
++ T I + + A +++ L +
Sbjct: 183 GNSSATAEASTAAAIDAIDAALATINSSRADLGAAQNRLTSTISNLQNVNENA 235
Score = 70.2 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 38/78 (48%)
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
++ +G+ +R+ ++ + + +GR+ D D A+E+ +L+ QT QQ +
Sbjct: 206 TINSSRADLGAAQNRLTSTISNLQNVNENAAAALGRVQDTDFAAETAQLTKQQTLQQAST 265
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 266 SVLAQANQLPSAVLKLLQ 283
>gi|296101721|ref|YP_003611867.1| flagellin domain-containing protein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295056180|gb|ADF60918.1| flagellin domain-containing protein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 278
Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 80/216 (37%), Gaps = 3/216 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++ L +L +R+SSGLR++ A D+AA +IA M S +
Sbjct: 1 MAVINTNLLSLTTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRMTSQVKGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQS 117
+ + G S V A+ +++ + I+ +D SI +EI Q +
Sbjct: 61 TQAARNANDGISLVQTAEGNLNEINTNLQRIRELSVQAATDTNGSSDLTSINTEIKQRLA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA ++FNG+ L + ++ + S + +
Sbjct: 121 EIDRIAGAANFNGKKLLDGSVSTALKIQVGAGTSSNDTISIDSNALINATSGTLSAGLST 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
S + + + + + I ++
Sbjct: 181 AISDNASAQAVISAADAAIAKIDTARSNMGAIQNRF 216
Score = 77.1 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 33/76 (43%)
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
A +G+I +R + + + + R+ DAD A+E + +S Q QQ
Sbjct: 203 DTARSNMGAIQNRFESTINNLNNSINNLSAAQSRIQDADYATEVSNMSRAQILQQAGTSV 262
Query: 436 LSIVNNSTARILSLFR 451
LS N +LSL R
Sbjct: 263 LSQANQVPQAMLSLLR 278
>gi|1580771|emb|CAA67104.1| flagellin [Pseudomonas aeruginosa]
Length = 340
Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 55/202 (27%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A T+ + + + + A+A N + T
Sbjct: 139 ATASGTVDIAIGITGGSAVNVKVDMKGNETAEQAAAKIAAAVNDANVGIGAFSDGDTISY 198
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
T T S + + +
Sbjct: 199 VSKAGKDGSGAITSAVSGVVITDTGSTGVGTAAGVAPSATAFAKTNDTVAKIDISTAKGA 258
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ V ID IK A +G++ +R + +K + + V GR+ D D A+E+
Sbjct: 259 QSAVLVIDEAIKQIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDFAAETAN 318
Query: 422 LSALQTQQQLAVQALSIVNNST 443
L+ Q QQ L+ N
Sbjct: 319 LTKNQVLQQAGTAILAQANQLP 340
Score = 79.8 bits (194), Expect = 9e-13, Method: Composition-based stats.
Identities = 37/332 (11%), Positives = 88/332 (26%), Gaps = 5/332 (1%)
Query: 46 YWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERG 102
IA + S L+ + G S A+ + ++ +++ +++
Sbjct: 1 GLQIANRLTSQVNGLNVATKNANDGISLAQTAEGALQQSTNILQRMRDLSLQSANGSNSD 60
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR--DDNGK 160
++ ++ E+ QLQ +L I+ ++F G L G ++ + D+
Sbjct: 61 SERTALNGEVKQLQKELDRISNTTTFGGRKLLDGSFGVASFQVGSVANEIISVGIDEMSA 120
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ + D + ++ GT + +K + + A+ +
Sbjct: 121 ESLNGTYFKADGGGAVTAATASGTVDIAIGITGGSAVNVKVDMKGNETAEQAAAKIAAAV 180
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ +A + + + T T + VA SAT
Sbjct: 181 NDANVGIGAFSDGDTISYVSKAGKDGSGAITSAVSGVVITDTGSTGVGTAAGVAPSATAF 240
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
N + + K + +
Sbjct: 241 AKTNDTVAKIDISTAKGAQSAVLVIDEAIKQIDAQRADLGAVQNRFDNTINNLKNIGENV 300
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ A L +++ T I
Sbjct: 301 SAARGRIEDTDFAAETANLTKNQVLQQAGTAI 332
>gi|3290028|gb|AAC25639.1| flagellin A [Campylobacter jejuni]
Length = 575
Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 94/279 (33%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + I+ K + ++
Sbjct: 185 EVQFTLKNYNGIDDFQFQKVVISTSVGTGLGALADEINKNADKTGVRATFTVETRGMAAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + G + S S
Sbjct: 245 RAGTTSDDFAINGVKIGKVAYEDGDANGALVSAINSVKD 283
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + I + + V+ ++ D D
Sbjct: 479 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVD 538
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A++ N+ +L L +
Sbjct: 539 FAAESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ 575
>gi|218661918|ref|ZP_03517848.1| flagellin C protein [Rhizobium etli IE4771]
Length = 275
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 86/146 (58%), Positives = 104/146 (71%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AM+A Q LR IN +LE Q+RVSSG RV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNVAAMAALQTLRGINDSLESTQNRVSSGYRVEKAADNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A + M AIDV+S IK KI A E+G D +Q EI QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYSAMDSAIDVISEIKAKIVAATEKGVDKTKVQEEIGQLQQQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA+ +SF+GENW+ G+ +
Sbjct: 121 SIAQSASFSGENWVAGADGTKSVVST 146
Score = 57.1 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 55/111 (49%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ S + + + ++ + + ++ I+ ++
Sbjct: 165 DTSSTGNVLFGMTSTGTIDTSAGIIGTSYGTIGSIYSMDISTFGSAEISMALTSIEAGLE 224
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
T AA ++GSIS+RI LQE+F+ + D+++ GVGRLVDADM ES++L+A
Sbjct: 225 AMTKAASQLGSISTRIELQENFVGALSDSIDSGVGRLVDADMEEESSKLTA 275
>gi|323341341|ref|ZP_08081585.1| flagellin [Lactobacillus ruminis ATCC 25644]
gi|323341347|ref|ZP_08081591.1| flagellin [Lactobacillus ruminis ATCC 25644]
gi|323091218|gb|EFZ33846.1| flagellin [Lactobacillus ruminis ATCC 25644]
gi|323091224|gb|EFZ33852.1| flagellin [Lactobacillus ruminis ATCC 25644]
Length = 283
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 46/257 (17%), Positives = 88/257 (34%), Gaps = 3/257 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +AM+ +L N ++SSGLR++ A D+AA +I++ MKS G L+
Sbjct: 8 INTNVAAMNTYSRLTAANTAKSNSLAKLSSGLRINKAGDDAAGLAISEKMKSQIGGLTQA 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S V A+ +++ ++ +++ G +D SI E+ L +L
Sbjct: 68 KRNAQDGISLVQTAEGALNETHSILERMRDLAVQGSNGTLTSSDRGSINKELKALHQELT 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + S + + ++ + + ++
Sbjct: 128 RISNTTEFNTQKLFSQTKQKSVTFTFQIGANAGQTLSVAITAMSGEALLVSTDAKFSLNA 187
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + I D+ TI+ S A + +
Sbjct: 188 AGTNAGAMIKSIDAAIAKVSDQRADLGAVQNRLEHTINNLTATNENLSDANSRIRDVDMA 247
Query: 241 QAKGIATIPVPLPAAPA 257
+ T L A
Sbjct: 248 EEMMTFTKSNILSQAAT 264
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 38/106 (35%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ A M+ ID I + +G++ +R+ + + + +
Sbjct: 178 STDAKFSLNAAGTNAGAMIKSIDAAIAKVSDQRADLGAVQNRLEHTINNLTATNENLSDA 237
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
R+ D DMA E + Q A L+ N +L+L +G
Sbjct: 238 NSRIRDVDMAEEMMTFTKSNILSQAATSMLAQANAMPNSVLNLLQG 283
>gi|209551493|ref|YP_002283410.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537249|gb|ACI57184.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 389
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 55/180 (30%), Positives = 84/180 (46%)
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
S + A T ++ DT + S
Sbjct: 209 SGRDQDFEAAVAQHRGAEIACVPVKATDPLYILYTSGTTGQPKGVVRDTGAIETSSGIIG 268
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ + + + + ++ ++ ++ + TAA +GSIS+RI L
Sbjct: 269 TAFNGTYGGTFIVMASIYDLDITGFTQGQLDSALTGVELVLGAMTAAGSALGSISTRIQL 328
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
QE+F+ + D+++ GVGRLVDADM ES++LSALQTQQQLAVQ+LSI N+S IL+LFR
Sbjct: 329 QENFVSGLHDSIDSGVGRLVDADMEEESSKLSALQTQQQLAVQSLSIANSSAQNILTLFR 388
>gi|119775441|ref|YP_928181.1| flagellin-like protein [Shewanella amazonensis SB2B]
gi|119767941|gb|ABM00512.1| flagellin-like protein [Shewanella amazonensis SB2B]
Length = 272
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 36/228 (15%), Positives = 77/228 (33%), Gaps = 3/228 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M A + L N +L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSMKAQKNLTLSNRDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S IA+ M + +++ +++ D S+++E+ QL ++
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLSIQAENGANSADDLTSLKNEMDQLALEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I ++F + + + T+ T
Sbjct: 124 TAIGNTTAFGDTKLMTGGFSNGKKFQVGHQNAEDVTVTVKTNNAGTLSVGALDVTTSGGR 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
ST + + + +++ S +
Sbjct: 184 STAMLKIDAAIKSIDTQRASLGAIQNRLAHNISNSANTQANVADAKSR 231
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 29/209 (13%), Positives = 53/209 (25%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + + + ++ A D+ + + +
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLSIQAENGANSADDLTSLKNEMDQLALEI 123
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+T A + E + T
Sbjct: 124 TAIGNTTAFGDTKLMTGGFSNGKKFQVGHQNAEDVTVTVKTNNAGTLSVGALDVTTSGGR 183
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ ID IK +G+I +R+ + V R+VD D A E++
Sbjct: 184 STAMLKIDAAIKSIDTQRASLGAIQNRLAHNISNSANTQANVADAKSRIVDVDFAKETST 243
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q QQ L+ N LSL
Sbjct: 244 MTKNQVLQQTGSAMLAQANQLPQIALSLL 272
>gi|85859211|ref|YP_461413.1| flagellin [Syntrophus aciditrophicus SB]
gi|85722302|gb|ABC77245.1| flagellin [Syntrophus aciditrophicus SB]
Length = 373
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++A + L + + +R+SSG R++ AAD+AA +I+ ++D + A
Sbjct: 5 IQNNIAALNAHRNLTISDSAMSKSLERLSSGYRINRAADDAAGLAISTQFRADIASYKAA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQLRD 121
S +S + A+ M + ++++ +K T ++ I E L ++
Sbjct: 65 SRNASEANSLLQTAEGAMDQISNMLTRLKELATQASSANASSNLAKINQEGNALLDEIDR 124
Query: 122 IARGSSFNGENWLRTDLGSSTASIA 146
IA + + G L G +S
Sbjct: 125 IASSTEYAGSKLLDGTFGIGISSGT 149
Score = 93.3 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 65/206 (31%)
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
T+ + A + ++ G + G ++ ++T + +
Sbjct: 167 TYTVSAVADGSDLALSVSATIGGQSIEQTLYGISVPSAGETNSARFDALGLTLTFNSNLS 226
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
++ + T+ + + + G + D + +
Sbjct: 227 TTSDGSIIATNGSESAFQVGAKNTNNDRINVSLGSVKAIDADGLDLSKDQLDSATEAQTF 286
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ IDT I +G+ +++ + + + D DMASE T +
Sbjct: 287 LATIDTAIAKLNTRRSSVGAAQNQLSYASAILATTIENATASESIIRDVDMASEMTTFTK 346
Query: 425 LQTQQQLAVQALSIVNNSTARILSLF 450
Q Q L+ N + +ILSLF
Sbjct: 347 NQILMQAGTSMLAQANMAPQQILSLF 372
>gi|319408957|emb|CBI82614.1| Flagellin [Bartonella schoenbuchensis R1]
Length = 405
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 103/451 (22%), Positives = 169/451 (37%), Gaps = 50/451 (11%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+SILTN SAM+A Q LR I+ NL+ +DR+S+GLR+++A DN AYWSI+ +MK D+ +S
Sbjct: 3 SSILTNRSAMTALQTLRAIDSNLDKSKDRISTGLRINNAGDNVAYWSISSMMKHDSNTMS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS-KSIQSEITQLQSQLR 120
V DAI LG +V IA + + + I+ + +G +Q I + +
Sbjct: 63 TVIDAINLGKEQVSIAATAVDLTKEALDNIQQSLVTVNGKGEVDVAKLQDSIKANMTNIS 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + SSF G+N L D +++ + G+ + D +V +++ + E ++D S
Sbjct: 123 NAVQSSSFAGKNMLANDGQTASIAAGYRREGTAVYVDMIEVGGAELNFGVMGENGIIDMS 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ LD + + ++ K LA +
Sbjct: 183 EGVLQNIFGLDAESNFAGALGTFNGAEETYNGLVNDLAKAKADLAKLVAIYGAEPEEEDP 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
I T + A A + V + +
Sbjct: 243 GHDEIETAQGKVEEAETALYGNPDDDDDLGGVGTFNEAKDAFKFEASNVTLAEFVQMENV 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + +
Sbjct: 303 GAM-----------------------------------SAEAQNILLGRLQNKVRDAVDL 327
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ I + + +F+K + D V+ G+G ++DADM +ES
Sbjct: 328 TLTAGAKIGSAVNLMNTQ--------------LEFVKRLLDNVDAGIGSMIDADMNAESA 373
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+LSALQ QQQL VQALSI N + IL LFR
Sbjct: 374 KLSALQVQQQLGVQALSIANQGSQNILLLFR 404
>gi|189339444|gb|ABD33709.2| flagellin [Bacillus thuringiensis serovar jegathesan]
Length = 361
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 90/273 (32%), Gaps = 3/273 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
++ G S + A + M+ +++ +++ + ++ E L+ Q+
Sbjct: 63 ANNTQDGMSLIRTADSAMNSVSNILLRMRDIANQSANGTNTNGNQAALNKEFDALKQQIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN + L + + S D T + +
Sbjct: 123 YISTNTEFNDKKLLDGSNKTIAIQTLDNADTSKKIDIQLADVSTKSLNIDKLKIGGVSKE 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + + LK + + + A T
Sbjct: 183 TTDAVGDTFTKLSTTATTDMGALKIEVEAAMKEFDKVKGAMSAEDAKAVTDKLDAFNTAA 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
A A A AA + T + SV
Sbjct: 243 AATNDAATIAAAKALGAAFDKTKVEMADPNASV 275
Score = 93.7 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 41/92 (44%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
V+ ID+ ++ + +G+ +R+ + +K + ++ ++ DADMA E
Sbjct: 270 DPNASVAAIDSALENIASNRATLGATLNRLDFNVNNLKSQQSSMASAASQIEDADMAKEM 329
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ + + + LS N + + L +
Sbjct: 330 SEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 361
>gi|332139405|ref|YP_004425145.1| Flagellin [Pantoea ananatis LMG 20103]
gi|326698718|gb|AEA04442.1| Flagellin [Pantoea ananatis LMG 20103]
Length = 310
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 71/205 (34%), Gaps = 3/205 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA A S+ L
Sbjct: 1 MAVINTNTLSLVTQNNLSKSQSSLGTAIERLSSGLRINSAKDDAAGEVDANRFTSNINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ +++ + + +++ D SIQ+E+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALTEVNNNLQRVRDLTVQAQNSSNSASDIDSIQAEVNQRMQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L T GSST +
Sbjct: 121 EIDRVTKQTDFNGIKVLNTGSGSSTYNFQVGAKDGETIGITISASDGFDLASAGQTGTTQ 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQV 202
++ T + + V
Sbjct: 181 NTRAMTTGDTVNGNARTTSAIGFDV 205
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 76/257 (29%)
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ + + + + + + ++ + A+ + A
Sbjct: 54 TSNINGLTVAARNANDGISLSQTAEGALTEVNNNLQRVRDLTVQAQNSSNSASDIDSIQA 113
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
++ G+S + K+ T + S + +
Sbjct: 114 EVNQRMQEIDRVTKQTDFNGIKVLNTGSGSSTYNFQVGAKDGETIGITISASDGFDLASA 173
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
T++T + D S + ++ + A T A ++ ID IK
Sbjct: 174 GQTGTTQNTRAMTTGDTVNGNARTTSAIGFDVLKGAVTGGTGGAAAGTTPLADIDKAIKA 233
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G+ +R + + R+ DAD A+E + +S Q QQ
Sbjct: 234 VDNQRSLLGASQNRFESTISNLNNTVTNLTAARSRIQDADYATEVSNMSRAQILQQAGSS 293
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 294 VLAQANQVPQTMLSLLR 310
>gi|224826970|ref|ZP_03700068.1| flagellin domain protein [Lutiella nitroferrum 2002]
gi|224600803|gb|EEG06988.1| flagellin domain protein [Lutiella nitroferrum 2002]
Length = 279
Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 81/221 (36%), Gaps = 3/221 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++A + L + +L R+SSGLRV+ A D+AA +I+Q + S +
Sbjct: 3 LTVNTNIASLNAQRNLNNSTSSLNQSLQRLSSGLRVNSAKDDAAGLAISQTLTSAIRGNN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G S A+ + + + + I+ T+ +Q E+ QL +
Sbjct: 63 QAIRNANDGVSVGQTAEGALGQITNNLQRIREIAVQASNGSVSDTNRSQLQKEVDQLTQE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ I + + FNG + L + + + + + TV +D
Sbjct: 123 ISRITQTTQFNGTSLLSGGSALTFQVGSSGSADNQLTISASDLTSLHSYNTALSATVTID 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
+T G L + + D ++
Sbjct: 183 VTTQGAASAALSGLDADLSSVSSSRSDFGAVQNRFDAVVAN 223
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 41/97 (42%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ A +S +D + +++ G++ +R + + + R+VD D
Sbjct: 183 VTTQGAASAALSGLDADLSSVSSSRSDFGAVQNRFDAVVANLSNYVENLSSANSRIVDVD 242
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+E+ L+ Q QQ L N++T LSL +
Sbjct: 243 FAAETANLTKNQILQQAGTSILKTANSTTQSALSLLQ 279
>gi|331007441|ref|ZP_08330618.1| Flagellar hook-associated protein flgL [gamma proteobacterium
IMCC1989]
gi|330418748|gb|EGG93237.1| Flagellar hook-associated protein flgL [gamma proteobacterium
IMCC1989]
Length = 421
Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats.
Identities = 44/431 (10%), Positives = 110/431 (25%), Gaps = 26/431 (6%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T H A+ + D N + Q+++S+G RV AAD+ + Q + + +
Sbjct: 3 ISTLHIYNLANNSMADANSAIIKTQEQLSTGKRVLTAADDPVAATQIQQLTDNLAQVDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ I + + ++ +++ IK + S+ S+ +A
Sbjct: 63 TKNIATAEHNLAEEETALNNVTNLVQRIKELAVQAGNTASLSE----------SEYDALA 112
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ + + Y D ++ + +
Sbjct: 113 TEVDSRINELVGLTNSRNANGDYIFAGYKSQSPAFVGDSVNGYQYMGDEGSINIKVDDNT 172
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ +N + + + + + T +
Sbjct: 173 FVKASDSGKNIFVDIPSAENTVLTSTNSNNRSTPAISVSIGDVVDQQAYDDFYPEDMVIT 232
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ A S A+ + + + + T
Sbjct: 233 FNEDSNLTPAARNFTVTEKSTGKVIAENQPYAAGEALVFNGVSVTITGNPAAADTG---- 288
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
D + +D+ + + + + + +A
Sbjct: 289 ----------AGLAGDQVFVDSTATQDVLTTLMRFRDAMQGFDGSQESRERVSANVA--V 336
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ + T +IG+ + + ++ + + D D A ++RLS
Sbjct: 337 TLENLTTVQDSVAKTVTEIGARINTLDSTKEQHLDTELVSNTILSDIRDLDYAEAASRLS 396
Query: 424 ALQTQQQLAVQ 434
A Q A
Sbjct: 397 AQTLVLQAAQA 407
>gi|90418259|ref|ZP_01226171.1| putative flagellin protein [Aurantimonas manganoxydans SI85-9A1]
gi|90337931|gb|EAS51582.1| putative flagellin protein [Aurantimonas manganoxydans SI85-9A1]
Length = 343
Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats.
Identities = 80/138 (57%), Positives = 97/138 (70%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN SAM+A Q L IN NL+ Q+R+S+G RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNTSAMTALQSLSMINSNLDQTQNRISTGYRVGAASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV DA+GLG +KVD A GM+ AIDV+ IK K+ A E G D IQSEI +LQ+QL
Sbjct: 61 GAVEDALGLGQAKVDTAYTGMNAAIDVVDEIKVKLVAAKEPGVDRNKIQSEIAELQNQLS 120
Query: 121 DIARGSSFNGENWLRTDL 138
IA +SF+GENWL +
Sbjct: 121 SIATSASFSGENWLSFND 138
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/201 (25%), Positives = 84/201 (41%)
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + +++G + + + + NS KN I
Sbjct: 132 NWLSFNDVEGTSKSVVASFNRSSAGAVSVGTIDIDTAGLKLFGDNSSAVPATLYKNGILD 191
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + G+ D + ++ + +
Sbjct: 192 IRTLGTTILDNDGDVSTLGDQLILNVSGLDISTTALNQAKVNAATGEAVAGQPNYLSVDD 251
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ +M++ ++T + T AA +G+ SR+ +Q +F+ +RD++EKGVG LVDADM ES
Sbjct: 252 VLSKMITNVETALGKMTTAASNLGAAKSRMDIQSEFVSNLRDSIEKGVGTLVDADMTEES 311
Query: 420 TRLSALQTQQQLAVQALSIVN 440
TRL ALQTQQQL VQALSI N
Sbjct: 312 TRLKALQTQQQLGVQALSIAN 332
>gi|170022975|ref|YP_001719480.1| flagellin domain-containing protein [Yersinia pseudotuberculosis
YPIII]
gi|169749509|gb|ACA67027.1| flagellin domain protein [Yersinia pseudotuberculosis YPIII]
Length = 401
Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats.
Identities = 65/454 (14%), Positives = 129/454 (28%), Gaps = 58/454 (12%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN SA +A L + R+S+G R++ ADNAA I M+ +
Sbjct: 3 LSIHTNASAKTAINSLSNAGLANAKSSQRLSTGFRINSPADNAAGLQITNRMEKFLNSAG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
I + + IA G+++++ ++ +K T D ++IQ E ++L +
Sbjct: 63 QAKQNIQESIAMLQIADGGLAESVKTLNAMKKLATQAANDTNSAADREAIQKEFSELGKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L++ + +N E D G + + +
Sbjct: 123 LQNALNNTEYNSEKLF-ADGGKMRKELNFQSGTDAESSLKLNLDSVIAELTESVTKQATP 181
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+G+ ++ + K + + + + AT
Sbjct: 182 VKANGSGSALEIEADTLHKATEKAKTAKEAADVATKDAQAKGAGTGATHRLTTAYDIPDY 241
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
++A + +A P +G+ A A + N +T +
Sbjct: 242 INEAGKSVSARTIATSADLKPIDLVDIAGAAVAMGKAHAAAEKEENLFQAKNSTGGGVMN 301
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ + +D
Sbjct: 302 MQLADKDLAMKADKKLSDVIDAYGAFR--------------------------------- 328
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
A ++ S S+ + M + +G + D D A E
Sbjct: 329 --------------ATLGANQNRLQSSSNNLD-------NMISNTAQALGSIKDTDFADE 367
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + Q +V L N +T I +L +G
Sbjct: 368 MKNHAQSEMLMQSSVMMLKKANAATQLISTLLQG 401
>gi|57169095|gb|AAW38937.1| flagellin [Borrelia lonestari]
Length = 329
Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ AAD+AA +A + S LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRAADDAAGMGVAGKLNSQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ ++ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKILVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
+A + +N + L + A+
Sbjct: 123 RVADQAQYNQMHMLSNKSSAQNVKTAE 149
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 38/106 (35%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
++ + ++ I+ I+ T +G+ +R+ + + ++
Sbjct: 224 QGGISSPINVTTAIDANASLTKIEDAIRMVTDQRANLGAFQNRLESVKASTDYAIENLKA 283
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ DA M E + Q A+ ++ N +LSL R
Sbjct: 284 SYAQIKDAIMTDEIVASTTNSILTQSAMAMIAQANQVPQYVLSLLR 329
>gi|73913486|gb|AAZ91670.1| flagellin FliC [Wigglesworthia glossinidia endosymbiont of Glossina
morsitans]
Length = 334
Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats.
Identities = 48/369 (13%), Positives = 97/369 (26%), Gaps = 39/369 (10%)
Query: 79 AGMSKAIDVMSTIKNKITAGVERGTDSKSI----QSEITQLQSQLRDIARGSSFNGENWL 134
+++ + M I+ + SK+ Q EI + S++ +A + NG L
Sbjct: 1 GAINEINENMHAIRRLTVQIKSTASVSKADKKSIQDEIKKRLSEIDRLAEQTESNGMKIL 60
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+ S A I + + + L S D
Sbjct: 61 SQNQRLSVQIGANDGQVVNIDLFKLDTESLHVKDFNVNSDALYASDIDENAVTSAKIGIE 120
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
K+ + ++ + F + K + A+ ++ P L
Sbjct: 121 AKKILDSSTPESKKNIKRQLYESGGEYFFKQIDGNEYYKVEISNTGVAQYNSSSPAELTE 180
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
P + T T ++A T I K + + +
Sbjct: 181 IPKSVKTAQITVEIDPKTLAVGETLKSYMKDGIQQYLIHKQEGDKEIYHEAIINYEGKVK 240
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
T L + + ID I
Sbjct: 241 SGSELDFETLLTM-----------------------------------DPLKEIDDAIAK 265
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
G +G+ +R+ + + + + ++DAD A+E + ++ QQ
Sbjct: 266 IDDIRGSLGATQNRLGSVINSLSTTIANLTQSRSNILDADFATEVSNMNRANILQQAGTA 325
Query: 435 ALSIVNNST 443
L+ N
Sbjct: 326 VLAQANAVP 334
>gi|171057697|ref|YP_001790046.1| flagellin domain-containing protein [Leptothrix cholodnii SP-6]
gi|170775142|gb|ACB33281.1| flagellin domain protein [Leptothrix cholodnii SP-6]
Length = 287
Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 43/214 (20%), Positives = 79/214 (36%), Gaps = 3/214 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I TN ++++A + +L R+SSGLRV+ A D+AA +IA+ M + ++
Sbjct: 4 TINTNMASLNAQRNQAASQMSLATSMQRLSSGLRVNSAKDDAAGLAIAERMNAQVKGMNV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
G S A+ G+ KA D + ++ TD S+ E +L ++
Sbjct: 64 AVRNANDGISMAQTAEGGLGKAADALQRMRELSVQSANATNSDTDRDSLDKEFGELAKEV 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ + G++FNG+N L + G + + T+ T +
Sbjct: 124 QRVLGGTTFNGKNILGANAGQMDFQVGANTTTDDTISITTTDMTTSATITAVAGTDNTGA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ I L I+
Sbjct: 184 GRAVIDSTAAATIGTTIDAIDDALDTINAERATM 217
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 47/144 (32%)
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
T+ T + D+ T N + + I
Sbjct: 144 QMDFQVGANTTTDDTISITTTDMTTSATITAVAGTDNTGAGRAVIDSTAAATIGTTIDAI 203
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D + A +G+ SR +++ + R++DAD ASE+ LS Q
Sbjct: 204 DDALDTINAERATMGASQSRFDSVISNLQVSVENQSAARSRIMDADFASETANLSRAQIL 263
Query: 429 QQLAVQALSIVNNSTARILSLFRG 452
QQ ++ N +++ L +G
Sbjct: 264 QQAGNAMIAQANQLPQQVMKLLQG 287
>gi|219670176|ref|YP_002460611.1| flagellin domain protein [Desulfitobacterium hafniense DCB-2]
gi|219540436|gb|ACL22175.1| flagellin domain protein [Desulfitobacterium hafniense DCB-2]
Length = 984
Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 4/160 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + AS L + RVSSGLR++ AAD+ A SI++ M+ L
Sbjct: 3 IYNNIPGLKASNALSKNIHKAGTPLARVSSGLRINHAADDGAGLSISEKMRGQIRGLMQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAID-VMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
S I G S +D A + + ++ D ++IQ E+ Q+Q L
Sbjct: 63 SRNIQDGLSYLDTADGYLGSINSPPLQRLRELAIQAANDTLTTQDRETIQKEVLQIQEHL 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
+ R + FN D+ S+ + G + G
Sbjct: 123 ERLFRTAEFNTHKIFAQDIKSTKTPTPGILPGDTLIRQYG 162
Score = 89.8 bits (220), Expect = 9e-16, Method: Composition-based stats.
Identities = 32/328 (9%), Positives = 75/328 (22%), Gaps = 3/328 (0%)
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
++N + G +A+ +I + +++ T +V +S R
Sbjct: 657 TYNTAQLVTQINGKLSAAGLGGMIEATSYSSYLELRSQTTGTTTQINSVSGNSVNTLFRR 716
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+N ID V G
Sbjct: 717 VDQYYQNAGYIPPSTSDTYIDGRVDLRQGITIGTGVNDKLAFDLHDDGTIERKTIILDAG 776
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
+ + + + D ++
Sbjct: 777 EYSENGLIDMINAKLQAQNLQVAAAIKNINTPQGPRTVMTLTYSPGKNGYFAIDGVGGSA 836
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA---NTDAYNEKLAMEE 363
+ Y + + + + + Y +++ +
Sbjct: 837 SYTVFYPGPYDITYTGGMDLKLQVGANSGNMVSTGTQYMMNTEILGIRRLDYTTRISADR 896
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ + + +AA G G+ + + + + ++ R+ DAD+A E
Sbjct: 897 AIDTVADAMAMVSAARGLNGAKRNALESLYYNVTQSAENLQAAESRIRDADLAKEMMAHV 956
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A L IL L +
Sbjct: 957 KQSLLSQAAEAVLVQTKQQPQMILELLK 984
>gi|261409639|ref|YP_003245880.1| flagellin domain-containing protein [Paenibacillus sp. Y412MC10]
gi|261286102|gb|ACX68073.1| flagellin domain protein [Paenibacillus sp. Y412MC10]
Length = 268
Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 3/181 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM++ + L N +++SSG R++ AAD+AA SI++ M++ ++
Sbjct: 3 INHNLNAMNSHRNLSFNNIQQGKSSEKLSSGFRINRAADDAAGLSISETMRAQIKGMNQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLR 120
G S V A+ M++ D+++ +K T + +IQ E L ++
Sbjct: 63 MRNTQDGISMVQAAEGAMNEVSDMLTRMKELATQASNGTYSTDDIAAIQLEYAALGEEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A SFNG L G+ T A S + + D +G + +
Sbjct: 123 RNATNFSFNGITLLDGSAGNVTIQSAGSDADAIVLDLSGIDLTALTFGTITDQATGATER 182
Query: 181 T 181
Sbjct: 183 G 183
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 27/217 (12%), Positives = 58/217 (26%)
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A + A + AT G A +
Sbjct: 52 MRAQIKGMNQGMRNTQDGISMVQAAEGAMNEVSDMLTRMKELATQASNGTYSTDDIAAIQ 111
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA 354
+ N + S + + + D+ ++
Sbjct: 112 LEYAALGEEINRNATNFSFNGITLLDGSAGNVTIQSAGSDADAIVLDLSGIDLTALTFGT 171
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +D I A +G+ +R+ + + + ++ R+ D D
Sbjct: 172 ITDQATGATERGVVDAAITAVNTARSTLGAYQNRLEHAFNNTSVNAENLQAAESRVRDTD 231
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA+E + + QQ + L+ N + +L L R
Sbjct: 232 MAAEMMKYTKFNILQQASTAMLAQANQAPQGVLQLLR 268
>gi|152997573|ref|YP_001342408.1| flagellin domain-containing protein [Marinomonas sp. MWYL1]
gi|150838497|gb|ABR72473.1| flagellin domain protein [Marinomonas sp. MWYL1]
Length = 294
Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 3/176 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN S+++A + L + +L+ R+SSGLR++ AAD+AA I+ + S L+
Sbjct: 5 VNTNVSSLNAQRSLTSSSRDLDTAYQRLSSGLRINSAADDAAGLQISDRLTSQINGLNQS 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
G S A+ M + ++ ++ D ++Q E+ QL ++
Sbjct: 65 VRNANDGISLAQTAEGAMDETTSMLQRMRTLSIQAANGSNSDKDRVALQQEMAQLSEEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
IA ++F G N L A + +G + + T+
Sbjct: 125 RIADTTTFGGANLLDGTFQGVFQVGADANQTISFTLQSGGANQSIDYLGNNGFTMS 180
Score = 92.9 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 51/165 (30%)
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
D + G + + +
Sbjct: 128 DTTTFGGANLLDGTFQGVFQVGADANQTISFTLQSGGANQSIDYLGNNGFTMSGLSSQAQ 187
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ T + + L + M+ +DT I + ++G+I +R + + + V
Sbjct: 188 VQVDVTTASVSSMLNAQSMIGILDTMISAVDSKRAELGAIQNRFSSTITNLSNISENVSS 247
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R+ DAD A E+ L++ Q QQ + L+ N LSL
Sbjct: 248 ARARVRDADFAQETANLTSQQILQQASSTILAQANQRPQTALSLL 292
>gi|5107845|gb|AAD28522.2|AF128951_1 flagellin [Escherichia coli]
gi|5107857|gb|AAD28529.2|AF128958_1 flagellin [Escherichia coli]
Length = 555
Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 71/236 (30%), Gaps = 3/236 (1%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA S+ L+ + G S +
Sbjct: 1 QSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+S+ + + I+ +D SIQ EI ++ ++ + FNG N L D
Sbjct: 61 LSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKD 120
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
A I ++ + + +
Sbjct: 121 GSMKIQVGANDGETITIDLKKIDSDTLGLNGFNVNGKGTITNKAATVSDLTSAGAKLNTT 180
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
LK + + + T G + D +T +
Sbjct: 181 TGLYDLKTENTLLTTDAAFDKLGNGDKVTVGGVNYTYNAKSGDFTTTKSTAGTGVN 236
Score = 87.1 bits (213), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 72/287 (25%)
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
D + + D + K + + L D +
Sbjct: 269 TKDGTVSFETDSAGNITIGGSQAYVDDAGNLTTNNAGSAAKADMKALLKAASEGSDGASL 328
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ A V + + TS S S
Sbjct: 329 TFNGTEYTIAKATPATTTPVAPLIPGGITYQATVSKDVVLSETKAAAATSSITFNSGVLS 388
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
T + + + TV+ N T + +
Sbjct: 389 KTIGFTAGESSDAAKSYVDDKGGITNVADYTVSYSVNKDNGSVTVAGYASATDTNKDYAP 448
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + V +N T+ + A ++ +D I +G+I +R+ +
Sbjct: 449 AIGTAVNVNSAGKITTETTSAGSATTNPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNL 508
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
+ + R+ DAD A+E + +S Q QQ L+ N
Sbjct: 509 NNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVP 555
>gi|213417960|ref|ZP_03351045.1| flagellin [Salmonella enterica subsp. enterica serovar Typhi str.
E01-6750]
Length = 156
Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 3/148 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
S G S + +++ + + ++ SIQ+EITQ +++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANGTNSQSDLDSIQAEITQRLNEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAK 147
++ + FNG L D + A
Sbjct: 124 DRVSGQTQFNGVKVLAQDNTLTIQVGAN 151
>gi|70729021|ref|YP_258755.1| flagellin [Pseudomonas fluorescens Pf-5]
gi|68343320|gb|AAY90926.1| flagellin FliC [Pseudomonas fluorescens Pf-5]
Length = 283
Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 83/233 (35%), Gaps = 3/233 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA IA M S +
Sbjct: 3 LTVNTNVTSLNVQKNLNRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRMTSQIRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ M ++ +++ ++ D ++ E Q+ +
Sbjct: 63 MAIKNANDGISIAQTAEGAMQESTNILQRMRELAVQSRNDSNGTQDRVALNKEFAQMSDE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA+ ++ NG+N + G+ T + + + +D T+ +
Sbjct: 123 LTRIAKSTNLNGKNLIDGSAGTMTFQVGSNTGSTNQITITLDSGFDAATLGVDSGTINIT 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ T I + + A +++ L +
Sbjct: 183 GNDSTTAETNTKAAMDAIDKALATINSSRADLGAAQNRLTSTISNLQNINENA 235
Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 53/139 (38%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
T +T L D+ V D+ + + + ID +
Sbjct: 145 MTFQVGSNTGSTNQITITLDSGFDAATLGVDSGTINITGNDSTTAETNTKAAMDAIDKAL 204
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++ +G+ +R+ ++ + + +GR+ D D A+E+ +L+ QT QQ +
Sbjct: 205 ATINSSRADLGAAQNRLTSTISNLQNINENASAALGRVQDTDFAAETAQLTKQQTLQQAS 264
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 TAVLAQANQLPSAVLKLLQ 283
>gi|117923390|ref|YP_864007.1| flagellin domain-containing protein [Magnetococcus sp. MC-1]
gi|117607146|gb|ABK42601.1| flagellin domain protein [Magnetococcus sp. MC-1]
Length = 271
Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 73/178 (41%), Gaps = 3/178 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++ +A ++L L +R+SSGLR++ A+D+AA +++ M + L+
Sbjct: 5 INTNVASSNAQRQLSKSTNALATTFERLSSGLRINSASDDAAGLTVSTRMTAQIRGLNQS 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S V +A+ +++ D + ++ TD + E+TQL +++
Sbjct: 65 ARNANDGISMVQVAEGALAETEDALQRMRELAVQAASGSYNNTDRSDLNDEVTQLVTEIT 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
I+ + FNG + + ++ A + + L
Sbjct: 125 RISTDTKFNGVSLMSSNQTFDIQVGADVGQKITVSTQGAGASALGVTTASITSAGLAS 182
Score = 97.1 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 38/97 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ID I + +G+ +R+ ++ + + + R++DAD
Sbjct: 175 ITSAGLASIAIGKIDAAIASVSDMRSVLGAQQNRLEAAITNLENVSERTQAARSRIMDAD 234
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+A E+ L+ QQ L+ N +LSL R
Sbjct: 235 IAQETANLTKQSILQQAGAAMLAQANQQPQLMLSLLR 271
>gi|326796588|ref|YP_004314408.1| flagellin domain protein [Marinomonas mediterranea MMB-1]
gi|326547352|gb|ADZ92572.1| flagellin domain protein [Marinomonas mediterranea MMB-1]
Length = 287
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 66/157 (42%), Gaps = 3/157 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN S+++A +L L+ R+SSGLR++ AAD+AA I+ + S L+
Sbjct: 5 VNTNTSSLNAQNQLTKTGSTLDTAFQRLSSGLRINSAADDAAGLQISNRLTSQINGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
G S A+ + + +++ ++ D ++Q E+ QL +++
Sbjct: 65 VRNANDGISLAQTAEGALDETTNMLQRMRTLAVQSANGSNTDEDRVALQQEMGQLATEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157
+A ++F G+N L A +
Sbjct: 125 RVATTTTFGGQNLLDGTYDGQFQVGADANQTISFSLS 161
Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 55/138 (39%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
T S +L + L + A+T + + + ++S ID I
Sbjct: 150 ADANQTISFSLSTVNTLGAAGAGFQMSGLNSAGYLASTISISAASLAQSVISQIDNMIAA 209
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ ++G++ +R + + + + V R+ DAD A+E+ L++ Q QQ +
Sbjct: 210 VDSKRAELGAVQNRFSSTINNLSNISENVSAARSRVRDADFATETATLTSAQILQQASST 269
Query: 435 ALSIVNNSTARILSLFRG 452
L+ N +SL G
Sbjct: 270 ILAQANQRPQTAISLLGG 287
>gi|291619614|ref|YP_003522356.1| FliC [Pantoea ananatis LMG 20103]
gi|291154644|gb|ADD79228.1| FliC [Pantoea ananatis LMG 20103]
gi|327396671|dbj|BAK14092.1| flagellin protein FliC [Pantoea ananatis AJ13355]
Length = 311
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ +
Sbjct: 1 MAVINTNTLSLVTQNNLTKSQSSLGTAIERLSSGLRINSAKDDAAGEAIANRFTSNINGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQS 117
+ + G S A+ +++ + + +++ + SIQ+E+ Q
Sbjct: 61 TVAARNANDGISLSQTAEGALTEINNNLQRVRDLTVQAQNSSNSASDVDSIQAEVNQRMQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTAS 144
++ + + + FNG L T GS+T +
Sbjct: 121 EIDRVTKQTDFNGIKVLNTGSGSTTYN 147
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 47/137 (34%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ T T + S + ++ + A T + ++ ID IK
Sbjct: 175 NASTGTTQNTSSTTGQTVNGNARTTSAIGFDVLKGAVTGGSGGTASGTTPLADIDKAIKA 234
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G+ +R + + R+ DAD A+E + +S Q QQ
Sbjct: 235 VDNQRSLLGASQNRFESTISNLNNTVTNLTAARSRIQDADYATEVSNMSRAQILQQAGSS 294
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 295 VLAQANQVPQTMLSLLR 311
>gi|1888389|emb|CAA72430.1| flagellin [Campylobacter sp.]
Length = 626
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 79/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ +A++A + L+ R+SSGLR++ AAD+A+ +IA +++ L
Sbjct: 3 INTHVAALNAKANSDLNSKALDQSLARLSSGLRINSAADDASGMAIADSLRTQASTLGQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ +S + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 63 INNGNDAASILQTADKAMDEQLKILDTIKVKATQAAQDGQSAKTRNMLQADINRLMEELD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I + + + SS
Sbjct: 123 NIANTTSFNGKQLLSGGFINQEFQIGAQSNQTIKASIGATQSSKIGVTRFETGANVTSSS 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + +
Sbjct: 183 IASMTIKNYNGIDDFKIQNVVISTSVGT 210
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 36/97 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I +GSI ++I + I + + V+ + D D
Sbjct: 530 VTTLKGAMAVMDVAETAITNLDTIRADLGSIQNQISATINNITVTQVNVKSAESTIRDVD 589
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ASES S Q A++ N S +L L +
Sbjct: 590 FASESANYSKANILAQSGSYAMAQANASQQNVLRLLQ 626
>gi|32472702|ref|NP_865696.1| flagellin E [Rhodopirellula baltica SH 1]
gi|32443939|emb|CAD73381.1| flagellin E [Rhodopirellula baltica SH 1]
Length = 718
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 49/368 (13%), Positives = 113/368 (30%), Gaps = 4/368 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN S++ A +L+ N +L+ R+S+GLR++ +D+ A ++ ++ + L
Sbjct: 38 MTRINTNVSSLVAQNRLQSSNNDLQQSLTRLSTGLRINSGSDDPAGLLASEALRGEITGL 97
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS----KSIQSEITQLQ 116
+ S + A + + + ++++ ++ + G S + Q +I
Sbjct: 98 TKSISNTQRASQIISTADSALGQVSNLLNDVRGLVVEAANSGALSKEEIAANQLQIDSSL 157
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+ I++ ++F G L + + S I D + ID + +
Sbjct: 158 EAINRISQTTTFQGRKLLDGSQDFVSTASGVSSISDISIDQANLGKTGKIDVEVVINSAA 217
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
++ + + + GA +
Sbjct: 218 TQATATAADSGFSAAAQATATTPAGINSVTLGDATNNLTIEGQFDSVEVIDGGASSATSA 277
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
+ D I+ + +G SG + A +D S
Sbjct: 278 SITDGVLTISVDAAATVTGASVVTALNGVSGVYAEETGTVADVNASAATDATAIEGAGLS 337
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
IT+ + ++ + + D+ + + A +A
Sbjct: 338 ITAADSGGDFNNVQINYVAGDAAATTASYDADQKALTVTIGTGAGENNLAAIAAAINAGT 397
Query: 357 EKLAMEEM 364
+ E
Sbjct: 398 TEFDAEVA 405
Score = 87.1 bits (213), Expect = 6e-15, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSR-IHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+E ID I G++GS S + + + +++ + DAD A
Sbjct: 624 TNDVEGAAKVIDEVIGKVVGLRGRLGSFQSTTLESNLVSLNETKANLQEAESSIRDADFA 683
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
ES L+ Q Q LS+ N + +LSL
Sbjct: 684 QESANLTRAQILVQSGTNVLSLANQNPRNVLSLL 717
>gi|27127324|dbj|BAC44985.1| flagellin [Campylobacter coli]
Length = 575
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 62/409 (15%), Positives = 113/409 (27%), Gaps = 3/409 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNGAALNAKANSDLNSKSLDQSLARLSSGLRINSAADDASGMAIADSLRSQASTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 64 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I S + + S
Sbjct: 124 NIANTTSFNGKQLLSGGFTNQEFQIGASSNQTIKATIGATQSSKIGVTRFETGAQSFTSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + + + I+ K + +K
Sbjct: 184 VVGLTIKNYNGIEDFKFDNVVISTSVGTGLGALAEEINKSADKTGVRATYDVKTTGVYAI 243
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + G S + + +
Sbjct: 244 KEGTTSQDFAINGVTIGKIEYKDGDGDGSLISAINAVKDTTGVQASKDENGKLVLTSADG 303
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G + VG+ E+ S + I ++
Sbjct: 304 RGIKITGDIGVGSGILANQKENYGRLSLVKNDGRDINISGTNLSAIGMGTTDMISQSSVS 363
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
+ E I A G + I A G R
Sbjct: 364 LRESKGQISATNADAMGFNSYKGGGKLVLSSAVSSISAFMSAQNSGFSR 412
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 40/328 (12%), Positives = 81/328 (24%)
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F + S+I + + + D D
Sbjct: 248 TSQDFAINGVTIGKIEYKDGDGDGSLISAINAVKDTTGVQASKDENGKLVLTSADGRGIK 307
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + V IS + + ++ +
Sbjct: 308 ITGDIGVGSGILANQKENYGRLSLVKNDGRDINISGTNLSAIGMGTTDMISQSSVSLRES 367
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A G S + SA + + S +
Sbjct: 368 KGQISATNADAMGFNSYKGGGKLVLSSAVSSISAFMSAQNSGFSRGSGFSVGSGKNLSVG 427
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
N + + + +T + S ++ T T
Sbjct: 428 LNQGIQIISSAASMSNTYVVSAGSGFSSGSGNSQFAALKTTAANTTDETAGVTTLKGAMA 487
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ +T I IGSI +++ + I + + V+ ++ D D ASES S
Sbjct: 488 VMDMAETAITNLDQIRADIGSIQNQVTSTINNITVTQVNVKAAESQIRDVDFASESANYS 547
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A++ N+S +L L +
Sbjct: 548 KANILAQSGSYAMAQANSSQQNVLRLLQ 575
>gi|218534741|ref|YP_002424502.1| conserved hypothetical protein; putative flagellin C-ter domain
[Methylobacterium chloromethanicum CM4]
gi|218525890|gb|ACK86473.1| conserved hypothetical protein; putative flagellin C-ter domain
[Methylobacterium chloromethanicum CM4]
Length = 420
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 77/450 (17%), Positives = 142/450 (31%), Gaps = 32/450 (7%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+SI + + L+D + Q+R+S+G +V+ A DN + +Q + S +G L+
Sbjct: 3 SSITLSAATRQNLLSLQDTAAMMSTTQNRLSTGKKVNSALDNPVNFFTSQSLNSRSGDLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
+ D I G V A G++ +L Q +
Sbjct: 63 GLLDGISNGIQVVQAANQGITSI----------------------------QKLVDQAKS 94
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I + + S+ + + K +S
Sbjct: 95 ITSQAIASKNTTTEGIGASAVVQPTADGVLKIEVNGVEKSINIKQYTAAVDAVAGTPASN 154
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
G D + P V D + K+ + A+
Sbjct: 155 GADGVVGGGDDVAAVAGTPAVPASGDDEQAIVDKLNAAVGTKVFSLDSGNKLVASGAGKV 214
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
L A + ++ S+ + + A + I A + +
Sbjct: 215 EIKDTATATALGLTAPAGSASTADFKSEDKTRTSLAKQFNSLLTQIDQMAKDASFNGVNL 274
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ K+ D+ S +D E + IT A+ +
Sbjct: 275 ISSGEKTNKLHVQFNENDSASLDIDGVDLTTGE----AGLNIAAITIDDAGKAFQSDDDI 330
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
VS +++ A + GS S + ++DF K + + + G L DAD+ +E+
Sbjct: 331 TTAVSSLNSASNTLRAQSSTFGSNLSVVQNRQDFSKQLINILTTGSSNLTDADLNAEAAN 390
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
AL T+Q L++ ALS+ N + IL L R
Sbjct: 391 SQALSTRQSLSISALSLANQAQQGILQLLR 420
>gi|304412499|ref|ZP_07394105.1| flagellin domain protein [Shewanella baltica OS183]
gi|307307158|ref|ZP_07586896.1| flagellin domain protein [Shewanella baltica BA175]
gi|304349141|gb|EFM13553.1| flagellin domain protein [Shewanella baltica OS183]
gi|306910397|gb|EFN40828.1| flagellin domain protein [Shewanella baltica BA175]
Length = 270
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M + TN++++ A + N L +R+S+GLR++ A+D+AA IA M ++ +
Sbjct: 1 MLGVHTNYASIVAQGAVNKSNNLLTNAMERLSTGLRINSASDDAAGLQIANRMSANVKGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQS 117
S I +S + A + + + + K T D ++ E TQL +
Sbjct: 61 ETASRNISDATSMLQTADGALEELTTIANRQKELATQASNGVNSAADLTALNDEFTQLNA 120
Query: 118 QLRDIARGSSFNGENWLRT 136
++ I +++ G T
Sbjct: 121 EITRIVENTTYAGNKLFDT 139
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 39/95 (41%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ +DT + +G+ +R+ + + + + GR++DAD A
Sbjct: 176 TGGTANAAIALVDTFLAAVGTERSTLGANINRLGHTAANLASVTENTKAAAGRIMDADFA 235
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ES ++ Q Q LS N +T ++ L R
Sbjct: 236 VESANMTRNQLLVQAGTTVLSSANQNTGLVMGLLR 270
>gi|328958292|ref|YP_004375678.1| flagellin [Carnobacterium sp. 17-4]
gi|328674616|gb|AEB30662.1| flagellin [Carnobacterium sp. 17-4]
Length = 386
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 38/95 (40%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++++ ID+ IK + +G+ +R+ + ++ + + R+ D DMA
Sbjct: 292 TAADYDKVIETIDSAIKSVSEERANLGATQNRLDHTVSNLATTKENLSEANSRITDVDMA 351
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + Q + L+ N +L L +
Sbjct: 352 EEMMSFTKSNILSQASTAMLAQANQMPQGVLQLLQ 386
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +AM+ +L N + ++SSGLR++ A D+AA +I++ MK+ ++
Sbjct: 3 INTNTAAMNTYSQLTSANASKSSSLAKLSSGLRINKAGDDAAGLAISEKMKNQISGMTQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S G S + A+ +S+ +++ +++ D+ +IQ E+ L S++
Sbjct: 63 SRNAQDGISLIQTAEGALSETHSILNRMRDLTVQSKNGTNTDEDTSAIQKEMDSLSSEIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTAS 144
IA+ + FN ++ L S+ +
Sbjct: 123 RIAKDTEFNSKSLLNGGTEGSSFT 146
>gi|6224680|gb|AAF05902.1|AF140252_1 flagellin A [Campylobacter jejuni subsp. jejuni 81-176]
Length = 574
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 52/279 (18%), Positives = 96/279 (34%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANSDLNSRALDQSLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGGFTNQEFQIGSSSNQTIKASIGATQSSKIGVTRFETGSQSFSSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T G + + + + I+ K + +K+ A
Sbjct: 185 TVGLTIKNYNGIEDFKFDSVVISTSVGTGLGALAEEINRNADKTGIRATFDVKSVGAYAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + N G + + S +
Sbjct: 245 KAGNTSQDFAINGVVIGQINYNDGDNNGQLISAINAVKD 283
Score = 95.6 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/329 (12%), Positives = 86/329 (26%)
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A +S + + + + + + VL +
Sbjct: 246 AGNTSQDFAINGVVIGQINYNDGDNNGQLISAINAVKDTTGVQASKDENGKLVLTSADGR 305
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
G + G + I + V IS + + ++ +
Sbjct: 306 GIKITGSIGVGAGILHTENYGRLSLVKNDGRDINISGTGLSAIGMGATDMISQSSVSLRE 365
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
A G + SA G+ + S +
Sbjct: 366 SKGQISAANADAMGFNSYKGGGKFVFTQNVSSISAFMSAQGSGFSRGSGFSVGSGKNLSV 425
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
+ + + + +T + S ++ T T
Sbjct: 426 GLSQGIQIISSAASMSNTYVVSAGSGFSSGSGNSQFAALKTTAANTTDETAGVTTLKGAM 485
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
++ +T I IGSI +++ + I + + V+ ++ D D ASES
Sbjct: 486 AVMDIAETAITNLDQIRADIGSIQNQVTSTINNITVTQVNVKAAESQIRDVDFASESANY 545
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N+S +L L +
Sbjct: 546 SKANILAQSGSYAMAQANSSQQNVLRLLQ 574
>gi|162418505|ref|YP_001604832.1| lateral flagellin [Yersinia pestis Angola]
gi|162351320|gb|ABX85268.1| lateral flagellin [Yersinia pestis Angola]
Length = 388
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 55/418 (13%), Positives = 114/418 (27%), Gaps = 52/418 (12%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN SA +A L + R+S+G R++ ADNAA I M+ +
Sbjct: 3 LSIHTNASAKTAINSLSNAGLANAKSSQRLSTGFRINSPADNAAGLQITNRMEKFLNSAG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
I + + IA G+++++ ++ +K T + ++ +Q + +
Sbjct: 63 QAKQNIQESIAMLQIADGGLAESVKTLNAMKKLATQAAND----TNSAADREAIQKEFSE 118
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ + T+ S + + +G +++ L+ L S
Sbjct: 119 LGKELQ---NALNNTEYNSEKLFADGGKMRKELNFQSGTDAESSLKLDLNSVIAELTESV 175
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ + D+D +V D ++ + T + + N +
Sbjct: 176 TKQAPKITGKSSSATGSLEKQAYDLDKAVTDTKSLVAGAEGVQKTLEHDFAASGNKAVAE 235
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
K P S + + A D
Sbjct: 236 IKIPEYKDALGKTVPEVVIALGAVITSANSNQMKDAVAALKTTHD--------------- 280
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ +K
Sbjct: 281 ------------------------------AAVKAEATFQAKNSTGGGVMNMQLADKDLA 310
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + I A +G+ +R+ + + M + +G + D D AS S
Sbjct: 311 MKADKKLSDVIDAYGAFRATLGANQNRLQSSSNNLDNMISNTAQALGSIKDTDFASLS 368
>gi|257871325|ref|ZP_05650978.1| flagellin protein [Enterococcus gallinarum EG2]
gi|257805489|gb|EEV34311.1| flagellin protein [Enterococcus gallinarum EG2]
Length = 360
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 41/96 (42%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ ++ ID IK +A +G+ +R+ + + ++ + + R+ D DMA
Sbjct: 265 TAIVENNPITKIDKAIKAVSAQRADLGAAQNRLEHTINNLGTTQENLSEANSRIRDVDMA 324
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
E + Q A L+ N+ +LSL +G
Sbjct: 325 QEMMSFTKSNILSQAATSMLAQANSMPNSVLSLLQG 360
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/252 (17%), Positives = 88/252 (34%), Gaps = 3/252 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN SA++ +L N + ++SSGLR++ A D+AA +I++ MK G LS
Sbjct: 3 INTNVSALNTYSRLTAANASKSNSLSKLSSGLRINKAGDDAAGLAISEKMKGQIGGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ +++ D +I E T L ++
Sbjct: 63 KSNAQDGISLIQTAEGALNETHSILGRMRDLAVQSSNGTLSDDDRSAINKEYTALSDEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN ++ L + + + + + +++ + + S
Sbjct: 123 RIRNNTEFNTKSLLTGEGNDAKSFTFQIGANANQTMSVSITNMSSTVLDVKGLDLTQAFS 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + D V A+G + T+ A A
Sbjct: 183 TSEIAAAKDKAVAAAFIADTTTKYAADGKVDAAAGKTAADLQTAIGTAADDAAEATAQKT 242
Query: 241 QAKGIATIPVPL 252
+AT
Sbjct: 243 YDDALATFTASD 254
>gi|167567203|ref|ZP_02360119.1| flagellin D [Burkholderia oklahomensis EO147]
Length = 303
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 4/164 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN ++M L + NL R+ +G R++ AAD+AA IA +++ + +
Sbjct: 1 MLSLHTNIASMRIQGALANSQANLTTSMTRLGTGYRINSAADDAAGLQIATRLRAQHRGM 60
Query: 61 SAVSD-AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQ 116
D S + A+ ++ +++ +K+ T + D ++Q E L
Sbjct: 61 EVARDKNASNAKSMLQTAEGAFAEVENIVQRMKDLATQAADSSYTQPDRDAMQKEYDALG 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
++L +I +S+ GE GS K + N
Sbjct: 121 NELINIIGNTSYGGEKLFAQATGSGGVGAGKLTKEMKFQIGNTA 164
Score = 92.1 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 34/97 (35%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
M+ + + +IG+ +R+ + M + G + D D
Sbjct: 207 IAAAKDANAMLDKLSAALDSVGGIRAEIGAGQNRLDHVRANLANMSSNTKDAEGSIRDVD 266
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ASE+ + L QQ L + + +LSL +
Sbjct: 267 YASEAANQAKLTILQQAGGSMLKQASQMSQLVLSLLQ 303
>gi|160896067|ref|YP_001561649.1| flagellin domain-containing protein [Delftia acidovorans SPH-1]
gi|160361651|gb|ABX33264.1| flagellin domain protein [Delftia acidovorans SPH-1]
Length = 290
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 3/149 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I TN +++A + L +L R+SSGLRV+ A D+AA +IA+ M + ++
Sbjct: 3 SIINTNLVSLNAQRNLSTSQSSLSTTMQRLSSGLRVNSAKDDAAGLAIAERMNAQVRGMN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ + K D + ++ TD S+ E QL +
Sbjct: 63 VAMRNANDGISMAQTAEGALGKLSDNLQRMRELAVQAANDTNGTTDRGSLDKEFQQLAQE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAK 147
+ I +SFNG L D + A
Sbjct: 123 IARIVGSTSFNGRQLLDNDNPTVFQVGAN 151
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 35/88 (39%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ IDT + G+ +R +++ + R++DAD A+E+ LS
Sbjct: 203 SMEAIDTALDLVNNTRATFGAAQNRFEAVISNLQVAAENTASARSRIMDADFAAETANLS 262
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ ++ N +L L +
Sbjct: 263 RTQILQQAGTAMVAQANQLPQSVLKLIQ 290
>gi|289577717|ref|YP_003476344.1| flagellin domain protein [Thermoanaerobacter italicus Ab9]
gi|289527430|gb|ADD01782.1| flagellin domain protein [Thermoanaerobacter italicus Ab9]
Length = 284
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A + L N + V +++SSG R++ A D+AA +I++ M++ L+
Sbjct: 3 INHNLSALNAWRALSVNTANTQKVLEKLSSGYRINRAGDDAAGLAISEKMRAQIAGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ ++ D ++IQ EI QL+ ++
Sbjct: 63 QRNAQDGISLIQTAEGALNETHAILQRMRELTVQAANSTNTLTDRQNIQKEIDQLKKEIN 122
Query: 121 DIARGSSFNGENWLRTD 137
IA + FN N L
Sbjct: 123 RIASTTQFNTRNLLNGS 139
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 43/137 (31%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + S + + ++ + A N + ++ ID I
Sbjct: 148 TFQIGANSQQVLKLNIATMTASALKGTAAGAMSMASINVATNNASVISAQINSIDAAINK 207
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ +G+ +R+ + + + + R+ D DMA + Q A
Sbjct: 208 VSGQRADLGAAQNRLEHTINNLGTAAENLTAAESRIRDVDMAQAMMEFTKDNILNQAATA 267
Query: 435 ALSIVNNSTARILSLFR 451
L+ N IL L R
Sbjct: 268 MLAQANQLPQTILQLLR 284
>gi|148554204|ref|YP_001261786.1| flagellin domain-containing protein [Sphingomonas wittichii RW1]
gi|148499394|gb|ABQ67648.1| flagellin domain protein [Sphingomonas wittichii RW1]
Length = 273
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 71/206 (34%), Gaps = 3/206 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN S++ + R + +R+SSG R++ A D+AA +IA M + +
Sbjct: 1 MAVINTNISSLRSQNAGRLASQLQATAMERLSSGKRINSAKDDAAGMAIASSMTASVRGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQS 117
S G S A+ + + +++ I+ ++Q+E++ LQS
Sbjct: 61 SVAIRNANDGISLAQTAEGALGEVSNMLQRIRELSVQAANGTYQSTDRDNLQTEVSALQS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ D+ + FNG G+S A G G + Y +
Sbjct: 121 QITDVVTKTKFNGNTLFSATSGTSFAIQTGVNAGDSTTISVGGLDKVAAAYASTIKVDTA 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVL 203
++
Sbjct: 181 ANAGLAITAADAALGQVNTVRAGLGA 206
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 53/177 (29%)
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+A ++ + T S + + +
Sbjct: 97 QAANGTYQSTDRDNLQTEVSALQSQITDVVTKTKFNGNTLFSATSGTSFAIQTGVNAGDS 156
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ +A+T + ++ D + +G+ SR+ +
Sbjct: 157 TTISVGGLDKVAAAYASTIKVDTAANAGLAITAADAALGQVNTVRAGLGATQSRLDAAVN 216
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + R+ DAD + EST L+ Q Q + L+ N + +LSL R
Sbjct: 217 VLTANVTNLSEARSRIEDADFSVESTALAKSQILAQASTAMLAQANQNGQSVLSLLR 273
>gi|120598241|ref|YP_962815.1| flagellin domain-containing protein [Shewanella sp. W3-18-1]
gi|120558334|gb|ABM24261.1| flagellin domain protein [Shewanella sp. W3-18-1]
Length = 271
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 67/178 (37%), Gaps = 3/178 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +++ A + L L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSLKAQKNLNTSASGLATSMERLSSGLRINGAKDDAAGLAISNRLNSQVRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S I++ M + +++ +++ D +IQ EI +L ++
Sbjct: 64 GMRNANDAISIAQISEGAMQEQTNMLQRMRDLTVQAENGANSTDDLDAIQKEIDELALEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+I ++F L + G I K + + T
Sbjct: 124 TEIGTNTAFGTTKLLDGTFSAGKTFQVGHQTGEDITISVAKTTASALKVGSLDITGSA 181
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 32/79 (40%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
IK + +G+ +R+ + + R+VD D A E+++++ Q QQ
Sbjct: 193 IKTIDSQRADLGAKQNRLAYNISNSANTQANIADAKSRIVDVDFAKETSQMTKNQVLQQT 252
Query: 432 AVQALSIVNNSTARILSLF 450
L+ N LSL
Sbjct: 253 GSAMLAQANQLPQVALSLL 271
>gi|241761167|ref|ZP_04759256.1| flagellin domain protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241374786|gb|EER64247.1| flagellin domain protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 307
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 74/204 (36%), Gaps = 3/204 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN SA+ A R + NL R+SSG ++ A+DNAA +I+ M + +
Sbjct: 1 MTVINTNTSALRAQNASRLADNNLNTSMTRLSSGKSINSASDNAAGLAISSSMTAQINGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ G S A + + +++ I D + E+ QLQ
Sbjct: 61 NQAIKNSNDGISLAQTADGALGEITNMVQRINQLAVQSANGTYRDTDRTDMDIEVKQLQG 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q++ + G+ FNG + + + + + + S T D T+ +
Sbjct: 121 QIKQVVTGTKFNGSALFASAVVTVGSDGTTTAVASKPATSFKIQTGATNATSTDQVTITI 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQ 201
+ TD +
Sbjct: 181 SALTDLSIVMNSGVPGTGTPPSGG 204
Score = 93.3 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 28/257 (10%), Positives = 61/257 (23%)
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ + + +++ ++ N Q+
Sbjct: 51 SSMTAQINGMNQAIKNSNDGISLAQTADGALGEITNMVQRINQLAVQSANGTYRDTDRTD 110
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
G + + + T ++ S P + N
Sbjct: 111 MDIEVKQLQGQIKQVVTGTKFNGSALFASAVVTVGSDGTTTAVASKPATSFKIQTGATNA 170
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
T T + + I +
Sbjct: 171 TSTDQVTITISALTDLSIVMNSGVPGTGTPPSGGQKPGLTVSTSTGALAALDTISKALTS 230
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G+ SR++ + + + R+ D D +SE+T L+ Q Q +
Sbjct: 231 VNKIRAGLGASESRLNSVVNNLTTNVTNLSDARSRIEDTDYSSETTNLARSQILSQASTA 290
Query: 435 ALSIVNNSTARILSLFR 451
L+ N S +LSL +
Sbjct: 291 MLAQANQSQQNVLSLLK 307
>gi|170725963|ref|YP_001759989.1| flagellin domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169811310|gb|ACA85894.1| flagellin domain protein [Shewanella woodyi ATCC 51908]
Length = 273
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 33/228 (14%), Positives = 84/228 (36%), Gaps = 3/228 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +++ A + L + NL +R+SSGL+++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSLKAQKNLNTSSGNLATSMERLSSGLKINSAKDDAAGLAISNRLNSQVRGLEV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S IA+ M + +++ +++ D ++++E+ QL +++
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTIQSENGANSTEDLAALKAEMDQLATEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+I ++F L+ + G ++ K T++ +
Sbjct: 124 DNIGTSTAFGNTKLLQGGFSAGKIFQVGHQEGEDVKVVVKKTDKTSLSVAALNNATSANR 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
++ + + + +++ S +
Sbjct: 184 ASSLAAIDKAIKTIDTQRADLGAVQNRLAHNISNSANTQANVADAKSR 231
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/209 (12%), Positives = 54/209 (25%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + + + + + D+ + + ++
Sbjct: 64 GMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTIQSENGANSTEDLAALKAEMDQLATEI 123
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
++ A + + E T +
Sbjct: 124 DNIGTSTAFGNTKLLQGGFSAGKIFQVGHQEGEDVKVVVKKTDKTSLSVAALNNATSANR 183
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ ID IK +G++ +R+ + V R+VD D A E+
Sbjct: 184 ASSLAAIDKAIKTIDTQRADLGAVQNRLAHNISNSANTQANVADAKSRIVDVDFAKETAT 243
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q QQ L+ N LSL
Sbjct: 244 MTKNQVLQQTGSAMLAQANQLPQVALSLL 272
>gi|2326185|gb|AAB66595.1| type-a flagellin [Pseudomonas aeruginosa]
Length = 340
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 54/202 (26%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A T+ + + + + A+A N + T
Sbjct: 139 ATASGTVDIAIGITGGSAVNVKVDMKGNETAEQAAAKIAAAVNDANVGIGAFSDGDTISY 198
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
T S + + +
Sbjct: 199 VSKAGKDGSGAITSAVSGVVIADTGSTGVGTAAGVAPSATAFAKTNDTVAKIDISTAKGA 258
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ V ID IK A +G++ +R + +K + + V GR+ D D A+E+
Sbjct: 259 QSAVLVIDEAIKQIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDFAAETAN 318
Query: 422 LSALQTQQQLAVQALSIVNNST 443
L+ Q QQ L+ N
Sbjct: 319 LTKNQVLQQAGTAILAQANQLP 340
>gi|229178168|ref|ZP_04305539.1| Flagellin [Bacillus cereus 172560W]
gi|228605298|gb|EEK62748.1| Flagellin [Bacillus cereus 172560W]
Length = 355
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 59/138 (42%), Gaps = 3/138 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R+++A+D+AA +IA M++ L ++ G
Sbjct: 1 MRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + A + M+ +++ +++ + ++ E L+ Q+ I+ +
Sbjct: 61 ISLIRTADSAMNSVSNILLRMRDLANQSANGTNTNENQAALNKEFDALKEQIDYISTNTE 120
Query: 128 FNGENWLRTDLGSSTASI 145
FN + L +
Sbjct: 121 FNDKKLLDGSNKTIAVQT 138
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 40/88 (45%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ IDT +K + +G+ +R+ + +K ++ ++ DADMA E + ++
Sbjct: 268 AIASIDTALKNIASNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMT 327
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + LS N + + L +
Sbjct: 328 KFKILNEAGISMLSQANQTPQMVSKLLQ 355
>gi|27357073|gb|AAN86121.1| flagellin [Borrelia lonestari]
gi|57169097|gb|AAW38938.1| flagellin [Borrelia lonestari]
Length = 328
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ AAD+AA +A + S LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRAADDAAGMGVAGKLNSQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ ++ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKILVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
+A + +N + L + A+
Sbjct: 123 RVADQAQYNQMHMLSNKSSAQNVKTAE 149
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 38/106 (35%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
++ + ++ I+ I+ T +G+ +R+ + + ++
Sbjct: 223 QGGISSPINVTTAIDANASLTKIEDAIRMVTDQRANLGAFQNRLESVKASTDYAIENLKA 282
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ DA M E + Q A+ ++ N +LSL R
Sbjct: 283 SYAQIKDAIMTDEIVASTTNSILTQSAMAMIAQANQVPQYVLSLLR 328
>gi|78356613|ref|YP_388062.1| flagellin [Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|78219018|gb|ABB38367.1| flagellin, putative [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 297
Score = 110 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 48/200 (24%), Positives = 77/200 (38%), Gaps = 3/200 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A++A+ L + L R+SSGLRV AAD+AA +I +IM+SD AL+
Sbjct: 5 INHNLMALNAANNLGNSYSKLATSIRRLSSGLRVGTAADDAAGLAIREIMRSDIAALNQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A + + + +K I SE + S++
Sbjct: 65 IRNANDAISLIQTADGALQVIDEKLIRMKELAEQAATGTYTSAQRLIIDSEYQAMASEIT 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG + L L +T + V ++ G + DYY S+
Sbjct: 125 RIANSTDFNGIHLLNGHLSGATHDGSGLVATGKLKVHFGTANDSAEDYYYIQIGASTASA 184
Query: 181 TDGTERYGLLDRNHKIKVEP 200
+ G + I +
Sbjct: 185 LGVGTQAGTSAKAASISTQS 204
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 47/133 (35%)
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
+ D + V A + + + A + ++ ++ I
Sbjct: 163 GTANDSAEDYYYIQIGASTASALGVGTQAGTSAKAASISTQSAAQAALAALEDAIVSKDK 222
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G+I +R+ +++ + ++ R+ D D++ E T + Q Q AV LS
Sbjct: 223 IRANLGAIQNRLENTITNLQIQSENLQAAESRISDVDVSLEMTEFTRQQILSQSAVAMLS 282
Query: 438 IVNNSTARILSLF 450
N L+L
Sbjct: 283 QANTLPRLALNLL 295
>gi|90418380|ref|ZP_01226292.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1]
gi|90338052|gb|EAS51703.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1]
Length = 299
Score = 110 bits (273), Expect = 7e-22, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 117/212 (55%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN SAM+A Q L IN +L+ Q+R+S+G RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNTSAMTALQSLSAINSSLDQTQNRISTGYRVGAASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV DA+GLG +KVD A GM+ AIDV+ IK+K+ A E G D I SEI +LQ QL
Sbjct: 61 GAVQDALGLGQAKVDTAYTGMTAAIDVVDEIKSKLVAAREPGVDKTKINSEIKELQGQLT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SF+GENWL + G++ + KSV+ SF RD G V + TI + +
Sbjct: 121 SIASSASFSGENWLSVNSGAAGYTATKSVVASFNRDSGGNVSVGTIGVDTSKTKLFDSNG 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYD 212
G G
Sbjct: 181 AAGILDTGRTGGTVVSTFTLTGATTDANISTM 212
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/157 (29%), Positives = 69/157 (43%)
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
N + T + + + + + +++
Sbjct: 132 NWLSVNSGAAGYTATKSVVASFNRDSGGNVSVGTIGVDTSKTKLFDSNGAAGILDTGRTG 191
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
+ + M+S +D + T AA +G+ SR+ +Q +F+ +RD++
Sbjct: 192 GTVVSTFTLTGATTDANISTMISDVDEALGAMTTAASNLGAAKSRMDIQSEFVSNLRDSI 251
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
EKGVG LVDADM ESTRL ALQTQQQL VQALSI N
Sbjct: 252 EKGVGTLVDADMTEESTRLKALQTQQQLGVQALSIAN 288
>gi|2326202|gb|AAB66597.1| a-type flagellin [Pseudomonas aeruginosa]
Length = 340
Score = 110 bits (273), Expect = 7e-22, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 55/202 (27%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A T+ + + + + A+A N + T
Sbjct: 139 ATASGTVDIAIGITGGSAVNVKVDMKGNETAEQAAAKIAAAVNDANVGIGAFSDGDTISY 198
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
T S + + +
Sbjct: 199 VSKAGKDGSGAITSAVSGVVIADTGSTGVGTAAGVTPSATAFAKTNDTVAKIDISTAKGA 258
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ V ID IK A +G++ +RI + +K + + V GR+ D D A+E+
Sbjct: 259 QSAVLVIDEAIKQIDAQRADLGAVQNRIDNTINNLKNIGENVSAARGRIEDTDFAAETAN 318
Query: 422 LSALQTQQQLAVQALSIVNNST 443
L+ Q QQ L+ N
Sbjct: 319 LTKNQVLQQAGTAILAQANQLP 340
>gi|240145372|ref|ZP_04743973.1| flagellin [Roseburia intestinalis L1-82]
gi|257202494|gb|EEV00779.1| flagellin [Roseburia intestinalis L1-82]
Length = 272
Score = 110 bits (273), Expect = 7e-22, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 91/265 (34%), Gaps = 3/265 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N +AM+A++ L +++SSG R++ A D+AA +I++ M+S L+
Sbjct: 2 VVQHNMTAMNANRMLGVTTSAQAKSSEKLSSGYRINRAGDDAAGLTISEKMRSQIRGLNK 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
SD G S + +A+ +S+ ++ + T D +IQ EI QL S++
Sbjct: 62 ASDNAQDGISLIQVAEGALSETHSILQRMNELATQAANDTNTTADRGAIQDEINQLTSEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FN +N + + + + + + +
Sbjct: 122 NRISSTTQFNTQNLIDGTFANKNLQVGSICGQRITVSIDSMSAGSLNVSANLVKVNTFSA 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + ++ ++ + A + A
Sbjct: 182 AGEAMSNIQGAISAISTQRSYLGALQNRLEHTISNLDNISENTQSAESRIRDTDMAEEMV 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSG 264
+K A +T G
Sbjct: 242 TYSKNNILAQAGQSMLAQANQSTQG 266
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 37/272 (13%), Positives = 69/272 (25%)
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ K + + T S
Sbjct: 1 MVVQHNMTAMNANRMLGVTTSAQAKSSEKLSSGYRINRAGDDAAGLTISEKMRSQIRGLN 60
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + A A + T + +A ++ +
Sbjct: 61 KASDNAQDGISLIQVAEGALSETHSILQRMNELATQAANDTNTTADRGAIQDEINQLTSE 120
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+++T N + S SM ++ AN N
Sbjct: 121 INRISSTTQFNTQNLIDGTFANKNLQVGSICGQRITVSIDSMSAGSLNVSANLVKVNTFS 180
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A E +S I I + +G++ +R+ + + + + R+ D DMA E
Sbjct: 181 AAGEAMSNIQGAISAISTQRSYLGALQNRLEHTISNLDNISENTQSAESRIRDTDMAEEM 240
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q L+ N ST +LSL +
Sbjct: 241 VTYSKNNILAQAGQSMLAQANQSTQGVLSLLQ 272
>gi|121612545|ref|YP_001000997.1| flagellin [Campylobacter jejuni subsp. jejuni 81-176]
gi|85067664|gb|ABC69276.1| FlaA [Campylobacter jejuni subsp. jejuni 81-176]
gi|87249732|gb|EAQ72691.1| flagellin B [Campylobacter jejuni subsp. jejuni 81-176]
Length = 576
Score = 110 bits (273), Expect = 7e-22, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 76/208 (36%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANSDLNAKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINKLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFTNQEFQIGASSNQTVKATIGATQSSKIGVTRFETGAQSFTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
G + +
Sbjct: 185 VVGLTIKNYNGIEDFKFDNVVISTSVGT 212
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/328 (11%), Positives = 81/328 (24%)
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F + S+I + + + D D
Sbjct: 249 TSQEFAINGVTIGKIEYKDGDGNGSLISAINAVKDTTGVQASKDENGKLVLTSADGRGIK 308
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + V IS + + ++ +
Sbjct: 309 ITGDIGVGSGILANQKENYGRLSLVKNDGRDINISGTNLSAIGMGTTDMISQSSVSLRES 368
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A G + SA G+ + S +
Sbjct: 369 KGQISATNADAMGFNSYKGGGKFVFTQNVSSISAFMSAQGSGFSRGSGFSVGSGKNLSVG 428
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + +T + S ++ T T
Sbjct: 429 LSQGIQIISSAASMSNTYVVSAGSGFSSGSGNSQFAALKTTAANTTDETAGVTTLKGAMA 488
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ +T I IGSI +++ + I + + V+ ++ D D ASES S
Sbjct: 489 VMDIAETAITNLDQIRADIGSIQNQVTSTINNITVTQVNVKAAESQIRDVDFASESANYS 548
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A++ N+S +L L +
Sbjct: 549 KANILAQSGSYAMAQANSSQQNVLRLLQ 576
>gi|124516973|emb|CAJ90401.1| flagellin [Escherichia coli]
Length = 212
Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 54/137 (39%), Gaps = 3/137 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
+L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 SQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISVAQTTEG 60
Query: 80 GMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ + + ++ SIQ+EITQ ++ ++ + FNG L
Sbjct: 61 ALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEIDRVSEQTQFNGVKVLAE 120
Query: 137 DLGSSTASIAKSVIGSF 153
+ A
Sbjct: 121 NNEMKIQVGANDGETIT 137
>gi|455428|gb|AAA17046.1| flagellin protein [Campylobacter jejuni]
Length = 575
Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 78/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +I ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIKDSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + +
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKASIGATQSSKIGLTRFETGSRISVGG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + +
Sbjct: 185 EVQFTLKNYNGIDDFKFQKVVISTSVGT 212
Score = 98.3 bits (242), Expect = 3e-18, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 36/97 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + + I + + V+ + D D
Sbjct: 479 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVD 538
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A+S N +L L +
Sbjct: 539 FAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 575
>gi|228964744|ref|ZP_04125851.1| Flagellin [Bacillus thuringiensis serovar sotto str. T04001]
gi|228794994|gb|EEM42493.1| Flagellin [Bacillus thuringiensis serovar sotto str. T04001]
Length = 358
Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R+++A+D+AA +IA M+S G L+ + G
Sbjct: 1 MRTQEYMRQNQTKMSNAMDRLSSGKRINNASDDAAGLAIATRMRSREGGLNVAARNTEDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + A + ++ +++ +++ + ++Q E QL+ Q++ IA +
Sbjct: 61 MSLIRTADSALNSVSNILLRMRDLANQSASETNTSKNQAAMQKEFDQLKEQIQYIADNTE 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGS 152
FN + L + S +
Sbjct: 121 FNDKKLLDGSNSTINIQTLDSHDKN 145
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 28/308 (9%), Positives = 84/308 (27%)
Query: 144 SIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
++A + + L + + + + +
Sbjct: 51 NVAARNTEDGMSLIRTADSALNSVSNILLRMRDLANQSASETNTSKNQAAMQKEFDQLKE 110
Query: 204 KDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTS 263
+ ++ +T + L + + + + + ++
Sbjct: 111 QIQYIADNTEFNDKKLLDGSNSTINIQTLDSHDKNKQITISLDSASLKNLDITDLAIGSN 170
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
+ + ++ S + +D V+A + S ++
Sbjct: 171 TVNKNDLDTLNNSMKRLETAAADAAVQAQDVTDAKNAFNKVKSGYTPAEVEKMEDAFKAY 230
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+ + +N T V ID I+ ++ +G
Sbjct: 231 DKVVADPAKTDALLKAAAEKINTEFKTLTAPTATAFDPSSSVEKIDKAIETIASSRATLG 290
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
+ +R+ +K +++ ++ DADMA E + ++ + + + LS N +
Sbjct: 291 ATLNRLDFNVTNLKSQENSMAASASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTP 350
Query: 444 ARILSLFR 451
+ L +
Sbjct: 351 QMVSKLLQ 358
>gi|157415576|ref|YP_001482832.1| flagellin [Campylobacter jejuni subsp. jejuni 81116]
gi|120254|sp|P22251|FLA_CAMJ8 RecName: Full=Flagellin A
gi|144198|gb|AAA23024.1| flagellin A [Campylobacter jejuni]
gi|157386540|gb|ABV52855.1| hypothetical protein C8J_1256 [Campylobacter jejuni subsp. jejuni
81116]
gi|307748217|gb|ADN91487.1| Flagellin B [Campylobacter jejuni subsp. jejuni M1]
Length = 576
Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 76/208 (36%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANSDLNAKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINKLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFTNQEFQIGASSNQTVKATIGATQSSKIGVTRFETGAQSFTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
G + +
Sbjct: 185 VVGLTIKNYNGIEDFKFDNVVISTSVGT 212
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/328 (11%), Positives = 81/328 (24%)
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F + S+I + + + D D
Sbjct: 249 TSQDFAINGVTIGKIEYKDGDGNGSLISAINAVKDTTGVQASKDENGKLVLTSADGRGIK 308
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + V IS + + ++ +
Sbjct: 309 ITGDIGVGSGILANQKENYGRLSLVKNDGRDINISGTNLSAIGMGTTDMISQSSVSLRES 368
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A G + SA G+ + S +
Sbjct: 369 KGQISATNADAMGFNSYKGGGKFVFTQNVSSISAFMSAQGSGFSRGSGFSVGSGKNLSVG 428
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + +T + S ++ T T
Sbjct: 429 LSQGIQIISSAASMSNTYVVSAGSGFSSGSGNSQFAALKTTAANTTDETAGVTTLKGAMA 488
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ +T I IGSI +++ + I + + V+ ++ D D ASES S
Sbjct: 489 VMDIAETAITNLDQIRADIGSIQNQVTSTINNITVTQVNVKAAESQIRDVDFASESANYS 548
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A++ N+S +L L +
Sbjct: 549 KANILAQSGSYAMAQANSSQQNVLRLLQ 576
>gi|271500091|ref|YP_003333116.1| flagellin domain-containing protein [Dickeya dadantii Ech586]
gi|270343646|gb|ACZ76411.1| flagellin domain protein [Dickeya dadantii Ech586]
Length = 280
Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 3/148 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ A L +L+ +R+SSGL ++ A DNAA I M + L
Sbjct: 1 MAVINTNSMSLLAQSNLNKSQSSLQTAIERLSSGLAINSAKDNAAGSGIVNGMTAQIKGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQS 117
+ S G S V A+ + D + I+ D +IQ+EI +
Sbjct: 61 TQASKNANDGVSLVQTAEGNLDTINDNLQRIRELAVQAANDTNGTNDRSAIQTEINRRVD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASI 145
++ +A ++FNG+ L + ++ +I
Sbjct: 121 EINRVAASANFNGKKLLDGSVTATGFNI 148
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 47/137 (34%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ S + + + + A + +V+ IDT ++
Sbjct: 144 TGFNIQVGAGTTSNDSISVGSSALINATAGGLGITATNTDVSNAAGATALVAAIDTALQT 203
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
A IG+ +R D + + + R+ DAD A+E + +S Q QQ
Sbjct: 204 VNTAKANIGATLNRFQSTIDNLSNTINNLSGARSRIQDADYATEVSNMSRAQILQQAGTS 263
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +L L +
Sbjct: 264 VLAQANQVPQTVLKLLQ 280
>gi|313681294|ref|YP_004059032.1| flagellin domain protein [Sulfuricurvum kujiense DSM 16994]
gi|313154154|gb|ADR32832.1| flagellin domain protein [Sulfuricurvum kujiense DSM 16994]
Length = 802
Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats.
Identities = 43/212 (20%), Positives = 78/212 (36%), Gaps = 3/212 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN SAM+A N NL+ ++SSGLR++ AAD+A+ IA +++ +L
Sbjct: 5 INTNISAMNAHSNSVMNNRNLDESLSKLSSGLRINKAADDASGMVIANALRNQANSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G + A +++ ++ TIK K + + +IQ +I +L +L
Sbjct: 65 ISNGNDGIGLIQTADGALNEYSKILDTIKTKAVQASSDGQNTSSRLAIQKDINRLMEELN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ +SFNG+ L + T + S + +
Sbjct: 125 TIAKTTSFNGQKLLSGSFTNKTIQMGASSNEGVNFSVASAETNKIGHTSRATLNLASEVG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYD 212
+ L + + +
Sbjct: 185 SVQLTMKSALTGENITMKAIDIQYNNTPENGM 216
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/278 (12%), Positives = 84/278 (30%)
Query: 174 TVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233
+ + ++ K++ + D A T +T K ++ A
Sbjct: 525 SSSSATVSEDMTLKSGSIIAAASKLKAGSVLGADTVNSSAVTTYTTTDLKAGSSLAAAST 584
Query: 234 AANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATT 293
+ I + + L + ++ +G+ + + + +
Sbjct: 585 LKEGSTIGGTVINSSAITLNSDMTIKAGSTLATGTVIKAGTVLTQDLTAAQTGAAAMSAG 644
Query: 294 KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD 353
T+++ T T +P +SG + + ++
Sbjct: 645 DKVTVDITTGAAITLSEDMTLLRGDGTAPTIAAGSTFMPNTENSGSVGIDAGEVTNLSSV 704
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ + + +D I +GS+ +++ + I + + V+ +L D
Sbjct: 705 SVLNLTDAMKAIDTLDAAIGDLDTIRADLGSVQNQLTATINNISVTQVNVKAAESQLRDV 764
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D A+ES S Q A+S N +L L +
Sbjct: 765 DFAAESANFSKFNILAQSGSYAMSQANAVQQNVLRLLQ 802
>gi|3290024|gb|AAC25637.1| flagellin A [Campylobacter jejuni]
gi|154996968|gb|ABS89176.1| FlaA [Campylobacter jejuni]
Length = 576
Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 76/208 (36%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANSDLNAKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINKLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFTNQEFQIGASSNQTVKATIGATQSSKIGVTRFETGAQSFTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
G + +
Sbjct: 185 VVGLTIKNYNGIEDFKFDNVVISTSVGT 212
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 38/328 (11%), Positives = 80/328 (24%)
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F + S+I + + + D D
Sbjct: 249 TSQDFAINGVTIGKIEYKDGDGNGSLISAINAVKDTTGVQASKDENGKLVLTSADGRGIK 308
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + V IS + + ++ +
Sbjct: 309 ITGDIGVGSGILANQKENYGRLSLVKNDGRDINISGTNLSAIGMGTTDMISQSSVSLRES 368
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A G + SA + + S +
Sbjct: 369 KGQISATNADAMGFNSYKGGGKFVFTQNVSSISAFMSAQDSGFSRGSGFSVGSGKNLSVG 428
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + +T + S ++ T T
Sbjct: 429 LSQGIQIISSAASMSNTYVVSAGSGFSSGSGNSQFAALKTTAANTTDETAGVTTLKGAMA 488
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ +T I IGSI +++ + I + + V+ ++ D D ASES S
Sbjct: 489 VMDIAETAITNLDQIRADIGSIQNQVTSTINNITVTQVNVKAAESQIRDVDFASESANYS 548
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A++ N+S +L L +
Sbjct: 549 KANILAQSGSYAMAQANSSQQNVLRLLQ 576
>gi|124516975|emb|CAJ90402.1| flagellin [Escherichia coli]
Length = 212
Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 3/131 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
+L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 SQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISVAQTTEG 60
Query: 80 GMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ + + I+ SIQ+EITQ ++ ++ + FNG L
Sbjct: 61 ALNEINNNLQRIRELSVQATNGTNSDSDLSSIQAEITQRLEEIDRVSEQTQFNGVKVLAE 120
Query: 137 DLGSSTASIAK 147
+ A
Sbjct: 121 NNEMKIQVGAN 131
>gi|126176147|ref|YP_001052296.1| flagellin domain-containing protein [Shewanella baltica OS155]
gi|125999352|gb|ABN63427.1| flagellin domain protein [Shewanella baltica OS155]
Length = 270
Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M + TN++++ A + N L +R+S+GLR++ A+D+AA IA M ++ +
Sbjct: 1 MLGVHTNYASIVAQGAVNKSNNLLTNAMERLSTGLRINSASDDAAGLQIANRMSANVKGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQS 117
S I +S + A + + + + K T D ++ E TQL +
Sbjct: 61 ETASRNISDATSMLQTADGALEELTTIANRQKELATQASNGVNSAADLTALNDEFTQLNA 120
Query: 118 QLRDIARGSSFNGENWLRT 136
++ I +++ G T
Sbjct: 121 EITRIVENTTYAGNKLFDT 139
Score = 86.7 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 39/90 (43%)
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ +DT + +G+ +R+ + + + + GR++DAD A ES
Sbjct: 181 NAAIALVDTFLAAVGTERSTLGANINRLGHTAANLASVTENTKAAAGRIMDADFAVESAN 240
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ Q Q LS N +T ++ L R
Sbjct: 241 MTRNQLLVQAGTTVLSSANQNTGLVMGLLR 270
>gi|302339096|ref|YP_003804302.1| flagellin domain protein [Spirochaeta smaragdinae DSM 11293]
gi|301636281|gb|ADK81708.1| flagellin domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 281
Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 77/200 (38%), Gaps = 3/200 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM A++ L N ++ +++SSG+R++ A D+A+ ++++ M+ L+
Sbjct: 3 INHNMSAMYANRSLSVRNSEVQSNIEKLSSGMRINRAGDDASGLAVSEKMRGQIKGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ I G S + + + + D++ ++ D IQ E++QL ++
Sbjct: 63 TRNIENGVSFIQATEGYLQETQDILHRLRELSVQSANGIYTDEDRMQIQVEVSQLVDEVN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG N L + + + +G+ + T L +
Sbjct: 123 RIASHAQFNGMNMLTGRFAQNGEQVMQFQVGANMDQSERIYIGTMTAQALGLQGSQGTEE 182
Query: 181 TDGTERYGLLDRNHKIKVEP 200
+
Sbjct: 183 MISITSVDSANMAIGQLDTA 202
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 20/179 (11%), Positives = 50/179 (27%)
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
+ + + + + + +D + +
Sbjct: 103 TDEDRMQIQVEVSQLVDEVNRIASHAQFNGMNMLTGRFAQNGEQVMQFQVGANMDQSERI 162
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ ++ + + + +DT ++ + +G+ +R
Sbjct: 163 YIGTMTAQALGLQGSQGTEEMISITSVDSANMAIGQLDTALRQVSRQRADLGAYQNRFET 222
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + ++ R+ D DMASE Q Q L+ N T +L LF
Sbjct: 223 ASQGVSIAAENLQAAESRIRDVDMASEMVDYMKNQILTQAGTAMLAQANTKTQSVLQLF 281
>gi|302669857|ref|YP_003829817.1| flagellin FliC1 [Butyrivibrio proteoclasticus B316]
gi|302394330|gb|ADL33235.1| flagellin FliC1 [Butyrivibrio proteoclasticus B316]
Length = 288
Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 3/155 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N +AM+++++L +++SSG R++ AAD+AA +I++ M+ L+
Sbjct: 2 VVQHNITAMNSNRQLGITTDVQAKSSEKLSSGYRINRAADDAAGLAISEKMRRQVRGLTQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
S G S V A+ +++ D++ + D IQ EITQL ++
Sbjct: 62 ASANAQDGISIVQTAEGALNEVHDMLQRMNELAVKAANDTLTTQDRSYIQQEITQLSDEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
A + FN ++ L + +
Sbjct: 122 TRTAASTEFNNQHLLDGTFTNKNLQVGSETNEQNQ 156
Score = 100 bits (247), Expect = 7e-19, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 37/112 (33%)
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
+ + + + I + + +G+I +R+ + +
Sbjct: 177 ETNSGITGTGNDQMDVMSHSNAKLAIENIKQALISISKQRSDLGAIQNRLEHTIKNLDNV 236
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + ++ D DMA E R S Q L+ N + +LSL +
Sbjct: 237 VENTQAAESQIRDTDMAEEMVRYSNNNILAQAGQSMLAQANQTNQGVLSLLQ 288
>gi|242278723|ref|YP_002990852.1| flagellin domain protein [Desulfovibrio salexigens DSM 2638]
gi|242121617|gb|ACS79313.1| flagellin domain protein [Desulfovibrio salexigens DSM 2638]
Length = 290
Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats.
Identities = 45/196 (22%), Positives = 75/196 (38%), Gaps = 3/196 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N AM+AS+ L++ NL V R+SSGLRV AAD+AA +I ++M++D +L+
Sbjct: 3 LVINHNLMAMNASRNLQESYGNLGVSTRRLSSGLRVGTAADDAAGLAIRELMRADIKSLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K T I SE + S+
Sbjct: 63 QGIRNANDAISMIQTADGALGVIDEKLIRMKELATQAATGTYNSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG + L ++ + + G YY+ T
Sbjct: 123 ITRIANATDFNGIHLLNGNVSGTHSGAGLESSGKIKVHFGTANDSAEDYYYVSIGTSTAS 182
Query: 179 SSTDGTERYGLLDRNH 194
+ G +
Sbjct: 183 ALGVGIAANNSISTQA 198
Score = 94.0 bits (231), Expect = 5e-17, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 43/101 (42%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
A ++ + + +E + ++ I +G++ +R+ + + + V+ R
Sbjct: 189 AANNSISTQALAQESLDKLNKAIISKDKIRANLGALQNRLENTITNLSIQAENVQAAESR 248
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ D D+A+E T + Q Q AV LS N+ + L
Sbjct: 249 ISDVDVATEMTEFTRNQILTQSAVAMLSQANSMPRMAMQLI 289
>gi|3290046|gb|AAC25648.1| flagellin A [Campylobacter jejuni]
Length = 576
Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 76/208 (36%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANSDLNAKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINKLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFTNQEFQIGASSNQTVKATIGATQSSKIGVTRFETGAQSFTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
G + +
Sbjct: 185 VVGLTIKNYNGIEDFKFDNVVISTSVGT 212
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 39/328 (11%), Positives = 82/328 (25%)
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+F + S+I + + + D D
Sbjct: 249 TSQNFAINGVTIGKIEYKDGDGNGSLISAINAVKDTTGVQASKDENGKLVLTSADGRGIK 308
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + V IS + + ++ +
Sbjct: 309 ITGDIGVGSGILANQKENYGRLSLVKNDGRDINISGTNLSAIGMGTTDMISQSSVSLRES 368
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A G + SA G+ + S +
Sbjct: 369 KGQISATNADAMGFNSYKGGGKFVFTQNVSSISAFMSAQGSGFSRGSGFSVGSGKNLSVG 428
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + +T + S ++ T T
Sbjct: 429 LSQGIQIISSAASMSNTYVVSAGSGFSSGSGNSQFAALKTTAANTTDETAGVTTLKGAMA 488
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ +T I IGSI +++ + I + + V+ ++ D D ASES S
Sbjct: 489 VMDIAETAITNLDQIRADIGSIQNQVTSTINNITVTQVNVKAAESQIRDVDFASESANYS 548
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A++ N+S +L L +
Sbjct: 549 KANILAQSGSHAMAQANSSQQNVLRLLQ 576
>gi|313681293|ref|YP_004059031.1| flagellin domain protein [Sulfuricurvum kujiense DSM 16994]
gi|313154153|gb|ADR32831.1| flagellin domain protein [Sulfuricurvum kujiense DSM 16994]
Length = 802
Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats.
Identities = 41/212 (19%), Positives = 78/212 (36%), Gaps = 3/212 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +AM+A N NL+ ++SSGLR++ AAD+A+ IA +++ +L
Sbjct: 5 INTNIAAMTAHTSGVMNNRNLDESLSKLSSGLRINKAADDASGMVIANALRNQANSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ A +++ ++ TIK K + + +IQ +I++L +L
Sbjct: 65 ISNGNDAIGLIQTADGALNEYSKILDTIKTKAVQASSDGQNTSSRLAIQKDISRLMEELN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ +SFNG+ L + T + S + +
Sbjct: 125 TIAKTTSFNGQKLLSGSFTNKTIQMGASSNEGVNFSVASTEPNKIGHTSRAQLNLASEVG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYD 212
+ L + + +
Sbjct: 185 SVQLTMKSALTGENITMKAIDIQYNNTPENGM 216
Score = 96.3 bits (237), Expect = 1e-17, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 40/104 (38%)
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
+ ++ + + + +D I +GS+ +++ + I + + V+
Sbjct: 699 TNLSSISVLNLTDAMKAIDTLDAAIGDLDTIRADLGSVQNQLTATINNISVTQVNVKAAE 758
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+L D D A+ES S Q A+S N +L L +
Sbjct: 759 SQLRDVDFAAESANFSKFNILAQSGSYAMSQANAVQQNVLKLLQ 802
>gi|291562066|emb|CBL40882.1| Flagellin and related hook-associated proteins [butyrate-producing
bacterium SS3/4]
Length = 286
Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 60/147 (40%), Gaps = 3/147 (2%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N ++++A++ L+ +++SSG R+ A D+AA +I++ M+S +L+
Sbjct: 6 NIASINAARNQGIETGKLKKSLEKLSSGFRIVRAGDDAAGLAISEGMRSRINSLNQAMRN 65
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIA 123
I G ++ +++ ++ +K + +++ E Q+ ++ I
Sbjct: 66 IDDGIGLTNVGDGALTEVHSMLQRLKTLALKSANGTYDQSNRETLNMERDQILEEIDRIG 125
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVI 150
+ F + ++ +
Sbjct: 126 STTKFGEISLFSRADANAITPGWQPPE 152
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 42/101 (41%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ ++ ++ V +I+ I+ + G+ + + + + + ++ ++
Sbjct: 186 DRTNFSTVEKGQKSVEYIENAIEAVSKVRASFGAAYMHLDHTHNNLSVTSENMQAAESQI 245
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D +MA E T+ ++ Q + L+ NN IL L +
Sbjct: 246 RDTNMAEEITKYTSSNIVLQSSNMMLTNANNLPQTILELLK 286
>gi|28372342|dbj|BAC56996.1| flagellin [Campylobacter jejuni]
Length = 572
Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 95/279 (34%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + L+ R+SSGLR++ AAD+A+ +IA ++S +
Sbjct: 4 INTNGAALNAKANSDLNSRALDQSLSRLSSGLRINSAADDASGMAIADSLRSQANTMGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 64 ISNGDDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I S + + + S
Sbjct: 124 NIANTTSFNGKQLLSGGFTNQEFQIGSSSNQTIKASIGATQSSKIGVTRFETGSQSFSSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T G + + + + I+ K + +K+ A
Sbjct: 184 TVGLTIKNYNGIEDFKFQNVVISTSVGTGLGALAEEINRNADKTGIRATFDVKSVGAYTI 243
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + + + G S +
Sbjct: 244 KAGNTSQDFAINGVVIGKVDYSDGDENGSLISAINAVKD 282
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 66/206 (32%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
I A G + + + + + G+ + S + +
Sbjct: 367 GQISAANADAMGFNAYNGGGAKQIIFASSIAGFMSQAGSGFSAGSGFSVGSGKNYSAILS 426
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+++ V + T + S ++ ++ H T ++
Sbjct: 427 ASIQIVSSAASISSTYVVSAGSGFSAGSGNSQFAALRISTVSAHDETAGVTTLKGAMAVM 486
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+T I IGS+ ++I + I + + V+ ++ D D ASES S
Sbjct: 487 DIAETAITNLDQIRADIGSVQNQITSTINNITVTQVNVKSAESQIRDVDFASESANYSKA 546
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q A++ N+S +L L +
Sbjct: 547 NILAQSGSYAMAQANSSQQNVLRLLQ 572
>gi|293115305|ref|ZP_05790814.2| flagellin [Butyrivibrio crossotus DSM 2876]
gi|292810600|gb|EFF69805.1| flagellin [Butyrivibrio crossotus DSM 2876]
Length = 140
Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 3/134 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N +AM++++ L +++SSG +++ AAD+AA SI++ M+ L+
Sbjct: 7 VVQHNLTAMNSNRMLGVTTSTQAKSTEKLSSGYKINRAADDAAGLSISEKMRKQIRGLTQ 66
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQL 119
S G S V A+ +++ D++ + G D IQ E+ QL ++
Sbjct: 67 ASSNAQDGISAVQTAEGALNEVQDMLQRMNELAVKAANGTNSEDDRNYIQDEVNQLIKEI 126
Query: 120 RDIARGSSFNGENW 133
++ + FN
Sbjct: 127 DRVSTTTKFNETYL 140
>gi|117923388|ref|YP_864005.1| flagellin domain-containing protein [Magnetococcus sp. MC-1]
gi|117607144|gb|ABK42599.1| flagellin domain protein [Magnetococcus sp. MC-1]
Length = 271
Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 73/178 (41%), Gaps = 3/178 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++ +A ++L L +R+SSGLR++ AAD+AA +++ M + L+
Sbjct: 5 INTNIASSNAQRQLLKSTNALGKTYERLSSGLRINSAADDAAGLTVSSRMTAQIRGLNQS 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S V +A+ +++ + ++ TD + E+TQL S++
Sbjct: 65 ARNANDGISLVQVAEGALAETEAALQRMRELAVQAASGSYTNTDRSDLNDEVTQLVSEIT 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
I+ + FNG + + ++ A + + + L
Sbjct: 125 RISTDTKFNGVSLMSSNQTFDIQVGADAGQKITVSTTAAGASALGVTTASITSAGLAS 182
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ID I + +G+ +R+ + + + + R++DAD
Sbjct: 175 ITSAGLASIAIGKIDAAIASVSDMRSVLGAQQNRLEAAITNLSNVSERTQAARSRIMDAD 234
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+A E+ L+ QQ L+ N +LSL R
Sbjct: 235 IAQETANLTKQSILQQAGAAMLAQANQQPQLMLSLLR 271
>gi|110227192|gb|ABG56545.1| LafA1 [Aeromonas hydrophila]
Length = 287
Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN ++++ +L N L R+ +GLR++ AAD+AA +A ++S +
Sbjct: 3 LSIHTNFASLTTQSQLNTTNKMLGTAMQRLGTGLRINSAADDAAGLQMATRLQSQSSGQK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
S + + M + +++ +K+ T D K++ +E T+L+++
Sbjct: 63 VGMRNSQDAISMMQTGEGAMDEMSNIVQRMKDLATQSANGTSTTEDRKAMDAEFTELRAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASI 145
L +I+ ++F G+ L+T G
Sbjct: 123 LDNISNNTTFGGQELLKTGKGFQEDVT 149
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 43/97 (44%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ +DT + + G+ +R+ + + M++ + GR++DAD
Sbjct: 191 IGAQDKATAAMAELDTFSQKIGESRSAFGANINRLEHTVNNLSNMKENTDLANGRIMDAD 250
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A EST ++ Q Q + LS N T + SL R
Sbjct: 251 FAQESTNMTKNQMLMQAGMSVLSNSNQMTGMVTSLLR 287
>gi|218885348|ref|YP_002434669.1| flagellin domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756302|gb|ACL07201.1| flagellin domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 298
Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 67/210 (31%), Gaps = 3/210 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N A++AS+ L + L R+SSGLRV AAD+AA +I ++M++D +
Sbjct: 3 LVINHNMMALNASRNLNESYGRLATSTRRLSSGLRVGTAADDAAGLAIRELMRADISTMR 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K I+SE + S+
Sbjct: 63 QGVRNANDAISMIQTADGALQIIDEKLIRMKELAEQAATGTYNSDQRLMIESEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG + L L + G YY+
Sbjct: 123 ITRIANATDFNGIHLLDGTLSGTHDGSGLRQTGELKIHFGTGNDSNEDYYYIKIGGATAS 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
G ++
Sbjct: 183 QLGIGNASASGAAAGGYTISTQSAAQNALT 212
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 59/203 (29%)
Query: 250 VPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
A + S+ ++A+ T I + + G
Sbjct: 96 AEQAATGTYNSDQRLMIESEYQAMASEITRIANATDFNGIHLLDGTLSGTHDGSGLRQTG 155
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
++ + + K A + + A + ++ +D
Sbjct: 156 ELKIHFGTGNDSNEDYYYIKIGGATASQLGIGNASASGAAAGGYTISTQSAAQNALTALD 215
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
I +G++ +R+ + + + ++ R+ D D+A E T Q
Sbjct: 216 QAIISKDKIRAALGALQNRLENTISNLTIQAENLQSSESRISDVDVAEEMTEFVRNQILT 275
Query: 430 QLAVQALSIVNNSTARILSLFRG 452
Q AV LS N+ + L G
Sbjct: 276 QSAVAMLSQANSLPQMAMKLIGG 298
>gi|291539407|emb|CBL12518.1| Flagellin and related hook-associated proteins [Roseburia
intestinalis XB6B4]
Length = 261
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/254 (14%), Positives = 90/254 (35%), Gaps = 3/254 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M+A+++L +++SSG R++ A D+AA +I++ M+S L+ SD G
Sbjct: 1 MNANRQLGITTGAQAKSSEKLSSGYRINRAGDDAAGLTISEKMRSQIRGLNKASDNAQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + +A+ +++ ++ + T D +IQ EI QLQS++ I+ +
Sbjct: 61 VSLIQVAEGALNETHSILQRMNELSTQAANDTNTTADRTAIQKEIDQLQSEITRISSTTQ 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
FN N + + + + + L + + +
Sbjct: 121 FNTMNLIDGKFTGKNLQVGSLCGQTITVSIDSMSASSLGVNSLKVSSFSAAGEAMCSVQK 180
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ + + + ++ ++ + + + + + + +A
Sbjct: 181 AISMVSEQRSKLGAIQNRLEHTIANLDNIAENTQSAESRIRDTDMAEEMVEYSKNNILAQ 240
Query: 248 IPVPLPAAPAAPNT 261
+ A
Sbjct: 241 AGQSMLAQANQSTQ 254
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 41/110 (37%)
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ N+ + A E + + I + K+G+I +R+ + + +
Sbjct: 152 SMSASSLGVNSLKVSSFSAAGEAMCSVQKAISMVSEQRSKLGAIQNRLEHTIANLDNIAE 211
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ R+ D DMA E S Q L+ N ST +LSL +
Sbjct: 212 NTQSAESRIRDTDMAEEMVEYSKNNILAQAGQSMLAQANQSTQGVLSLLQ 261
>gi|146293681|ref|YP_001184105.1| flagellin domain-containing protein [Shewanella putrefaciens CN-32]
gi|145565371|gb|ABP76306.1| flagellin domain protein [Shewanella putrefaciens CN-32]
Length = 271
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 3/163 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +++ A + L L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSLKAQKNLNTSASGLATSMERLSSGLRINGAKDDAAGLAISNRLNSQVRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S I++ M + +++ +++ D SIQ EI QL ++
Sbjct: 64 GMRNANDAISIAQISEGAMQEQTNMLQRMRDLTVQAENGANSSDDLTSIQKEIDQLALEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
I ++F L + G I K
Sbjct: 124 TAIGTNTAFGTTKLLDGTFSAGKTFQVGHQSGEDITISVSKTT 166
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 32/79 (40%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
IK + +G+ +R+ + + R+VD D A E+++++ Q QQ
Sbjct: 193 IKTIDSQRADLGAKQNRLAYNISNSANTQANISDAKSRIVDVDFAKETSQMTKNQVLQQT 252
Query: 432 AVQALSIVNNSTARILSLF 450
L+ N LSL
Sbjct: 253 GSAMLAQANQLPQVALSLL 271
>gi|300854157|ref|YP_003779141.1| putative flagellin B [Clostridium ljungdahlii DSM 13528]
gi|300434272|gb|ADK14039.1| putative flagellin B [Clostridium ljungdahlii DSM 13528]
Length = 547
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 70/202 (34%), Gaps = 3/202 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A +A + + ++SSGLR++ AAD+AA +I++ MK+ G L+
Sbjct: 3 INHNLQANNAIRHMNSNTNAASKSMQKLSSGLRINSAADDAAGLAISEKMKAQVGGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ +++ ++ ++ D +IQ E+ QL S++
Sbjct: 63 NANAQDGVSMTQTAEGALNETTSILQRMRTLANQAANGTNTDQDRSNIQDEMDQLTSEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN + L GS + + T L + + S
Sbjct: 123 RIGNTTEFNTQKLLDGGTGSVDGNKITQATSATATIGKLTAGTLTNASTLTIDGQTFNFS 182
Query: 181 TDGTERYGLLDRNHKIKVEPQV 202
Sbjct: 183 NVKVAGNATDGATLGNVTNANG 204
Score = 58.2 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/436 (9%), Positives = 106/436 (24%), Gaps = 25/436 (5%)
Query: 13 ASQKLRDINYNLEVV-----QDRVSSGLRVSDAA-----------DNAAYWSIAQIMKSD 56
A+Q N + + D+++S ++ D +
Sbjct: 94 ANQAANGTNTDQDRSNIQDEMDQLTS--EINRIGNTTEFNTQKLLDGGTGSVDGNKITQA 151
Query: 57 NGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ 116
A + + L + + A + + T + +L
Sbjct: 152 TSATATIGK---LTAGTLTNASTLTIDGQTFNFSNVKVAGNATDGATLGNVTNANGKKLS 208
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+ A +S + + + + A S + L +
Sbjct: 209 DYVDIKATANSITFTDKATGTTSTLSGATAFSGVTGTGTAATIAKSGVEGANALTGADIS 268
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+ + + T + G K + S D + + + + A A
Sbjct: 269 IAAGSSFTVKVGQDAAVTVNLPSTMSNKVYNTSSTDKNIQQAALQDLARDLNAALQNAGL 328
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGN----SDIWVRAT 292
A + + + T + + S +
Sbjct: 329 GNNVTAAVSSGNKLQFISNTGNDITLAEVGAGTTLSTTLGMDTNLKTTGIAIQQVVGPGA 388
Query: 293 TKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANT 352
+ + + + + + + + +
Sbjct: 389 AGSGFNTTFQIGANEGQSMSLNINDMRAAALGITGNAGQTGFTMTNTVTNGTTDIKQEAA 448
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
K ++ ID + A GK+G++ +R+ E+ + + + R+ D
Sbjct: 449 LNVMNKDDASAALTTIDKALSTVAAERGKLGAVQNRLEHTENNLSTSAENLTSAQARITD 508
Query: 413 ADMASESTRLSALQTQ 428
DMASE + S
Sbjct: 509 VDMASEMSEYSKNNIL 524
>gi|319427081|gb|ADV55155.1| flagellin domain protein [Shewanella putrefaciens 200]
Length = 266
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 70/183 (38%), Gaps = 3/183 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M A + L L +R+SSGLR++ A D+AA +I+ + S
Sbjct: 4 TVNTNVTSMKAQKNLNTSGQALATSMERLSSGLRINSAKDDAAGLAISNRLNSQIRGQEV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQL 119
S IA+ M + +++ +++ +D ++Q+E QL +++
Sbjct: 64 GMRNANDAISVAQIAEGAMQEQTNMLQRMRDLSVQATNGANSTSDIAALQAEYDQLVTEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I ++F L + +V + D + T + L
Sbjct: 124 DAIGANTAFGDTKVLDGTFTAKNFQTGHTVAEAITVDIADMSGVGTAASGVVGTATLALI 183
Query: 180 STD 182
T
Sbjct: 184 DTQ 186
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 50/137 (36%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ DT+ + + +T++I + + ++ IDTQI
Sbjct: 129 NTAFGDTKVLDGTFTAKNFQTGHTVAEAITVDIADMSGVGTAASGVVGTATLALIDTQIA 188
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G+I +R+ ++ V R+VD D A E+ ++ Q QQ
Sbjct: 189 AVDAERANLGAIQNRMTHNIANNANVQANVADAKSRIVDVDFAKETATMTKNQVLQQTGS 248
Query: 434 QALSIVNNSTARILSLF 450
L+ N LSL
Sbjct: 249 AMLAQANQLPQVALSLL 265
>gi|30721714|gb|AAP34188.1| FliC [Pseudomonas aeruginosa]
Length = 183
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 41/130 (31%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T S + + + + V ID IK
Sbjct: 54 TSAVSGVVIADTGSTGVGTAAGVTPSATAFAKTNDTVAKIDISTAKGAQSAVLVIDEAIK 113
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + +K + + V GR+ D D A+E+ L+ Q QQ
Sbjct: 114 QIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDFAAETANLTKNQVLQQAGT 173
Query: 434 QALSIVNNST 443
L+ N
Sbjct: 174 AILAQANQLP 183
>gi|306819594|ref|ZP_07453291.1| flagellin FliC [Mobiluncus mulieris ATCC 35239]
gi|304647629|gb|EFM44957.1| flagellin FliC [Mobiluncus mulieris ATCC 35239]
Length = 405
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 37 VSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT 96
++ AAD+AA +I++ +++ G G S V A+ +++ ++ ++
Sbjct: 1 INRAADDAAGLAISEGLRTQVGGNRQAVRNAQDGISLVQTAEGALNEVHSILQRMRTLAV 60
Query: 97 AGVERGTD---SKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
G +I +E+TQL+ +L I ++FNG L
Sbjct: 61 QGANDSNSPQARDNINTELTQLREELERIGNVTNFNGTQLLDGSAS 106
>gi|15895471|ref|NP_348820.1| hook-associated protein, flagellin family [Clostridium
acetobutylicum ATCC 824]
gi|15025199|gb|AAK80160.1|AE007720_7 Possible hook-associated protein, flagellin family [Clostridium
acetobutylicum ATCC 824]
gi|3135667|gb|AAC16553.1| flagellin [Clostridium acetobutylicum ATCC 824]
gi|325509618|gb|ADZ21254.1| putative hook-associated protein, flagellin family [Clostridium
acetobutylicum EA 2018]
Length = 275
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N +AM+A +++ N +++SSG R++ A D+AA +I++ M++ L+
Sbjct: 2 VINHNLNAMNALRQMNINNGEAANSIEKLSSGYRINKAGDDAAGLAISEKMRAQINGLNQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
+ G S V A+ ++++ ++ ++ TD +++ E QLQS++
Sbjct: 62 STRNAQDGISLVQTAEGNLNESQAILQRMRELAVQSATGTNTSTDRANLELEFKQLQSEV 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA S FN + L L + + S ++ ++ + + +
Sbjct: 122 TRIAVQSEFNTKKLLDGSLTGTAQMTFQIGANSGQTISLSINNMSATSLGVNTTSASIST 181
Query: 180 STDGTERYGLLDRNHKIKVEPQV 202
T + + +
Sbjct: 182 QTGAQAAITSVQKAIDTVSSERA 204
Score = 99.0 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 51/137 (37%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ T S +M ++ + + + + + + ++ + I
Sbjct: 139 SLTGTAQMTFQIGANSGQTISLSINNMSATSLGVNTTSASISTQTGAQAAITSVQKAIDT 198
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
++ K+GS+ +R+ + + + ++ R+ D DMASE + Q A
Sbjct: 199 VSSERAKLGSVQNRLEHTINNLNTDSENLQSAESRIRDVDMASEMMNYTKSNVLVQAAQA 258
Query: 435 ALSIVNNSTARILSLFR 451
LS N + +L L R
Sbjct: 259 MLSQANQTPNNVLQLLR 275
>gi|115381318|gb|ABI96342.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Kedougou]
gi|115381320|gb|ABI96343.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Kedougou]
gi|115381322|gb|ABI96344.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Kedougou]
gi|115381324|gb|ABI96345.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Kedougou]
Length = 221
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAK 147
+ A
Sbjct: 121 NTLTIQVGAN 130
>gi|3290036|gb|AAC25643.1| flagellin A [Campylobacter jejuni]
Length = 576
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 92/279 (32%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN SA++A +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVSALNAKPNSDLNAKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQTNTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFTNQEFQIGASSNQTIKATIGATQSSKIGVTRFETGAQSFTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + + + I+ K + +K
Sbjct: 185 VVGLTIKNYNGIEDFKFDNVVISTSVGTGLGALAEEINKSADKTGVRATYDVKTTGVYAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ + N G + + S +
Sbjct: 245 KEGTTSQNFAINGVVIGQINYKDGDNNGQLVSAINAVKD 283
Score = 95.6 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/328 (10%), Positives = 80/328 (24%)
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+F + + ++ + + + D D
Sbjct: 249 TSQNFAINGVVIGQINYKDGDNNGQLVSAINAVKDTTGVQASKDENGKLVLTSADGRGIK 308
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + V IS + + ++ +
Sbjct: 309 ITGDIGVGSGILANQKENYGRLSLVKNDGRDINISGTNLSAIGMGTTDMISQSSVSLRES 368
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A G + SA G+ + S +
Sbjct: 369 KGQISATNADAMGFNSYKGGGKFVFTQNVSSISAFMSAQGSGFSRGSGFSVGSGKNLSVG 428
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + +T + S + T T
Sbjct: 429 LSQGIQIISSAASMSNTYVVSAGSGFSSGSGNSQFGVLKTTAANTTDETAGVTTLKGAMA 488
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ +T I IGSI +++ + I + + V+ ++ D D +SES S
Sbjct: 489 GMDIAETAITNLDQIRADIGSIQNQVTSTINNITVTQVNVKAAESQIRDVDFSSESANYS 548
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q +++ N+S +L L +
Sbjct: 549 KANILAQSGSYSMAQANSSQQNVLRLLQ 576
>gi|435009|emb|CAA53011.1| flagellin [Borrelia burgdorferi]
Length = 336
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVRTAE 149
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 21/200 (10%), Positives = 55/200 (27%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + T+ G + + A+ S + +
Sbjct: 137 SNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGAPQDEAIAVNIYAANVAN 196
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ T + + + + ++ I+
Sbjct: 197 LFSGEGAQTAQAAPVQEGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENA 256
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I+ + +G+ +R+ +D + + ++ ++ DA M E + Q
Sbjct: 257 IRMISDQRPNLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQS 316
Query: 432 AVQALSIVNNSTARILSLFR 451
A+ ++ N +LSL R
Sbjct: 317 AMAMIAQANQLPQYVLSLLR 336
>gi|115381310|gb|ABI96338.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Goldcoast]
gi|115381312|gb|ABI96339.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Goldcoast]
gi|115381314|gb|ABI96340.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Goldcoast]
Length = 221
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAK 147
+ A
Sbjct: 121 NTLTIQVGAN 130
>gi|315657467|ref|ZP_07910349.1| flagellin [Mobiluncus curtisii subsp. holmesii ATCC 35242]
gi|315491939|gb|EFU81548.1| flagellin [Mobiluncus curtisii subsp. holmesii ATCC 35242]
Length = 407
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 3/137 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN A++A + L R+SSG R++ AAD+++ ++ Q +++
Sbjct: 129 SITTNIMALNAYRHNASAVQLLHQSLQRLSSGKRINSAADDSSSLALVQGLRTQVLGNRQ 188
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
G S A + D++ ++ G I +E+ ++ ++
Sbjct: 189 AIKNAQDGISLTQTADGVLDAVHDMLQRMRQLAVKGANDTYSLRARVQIGAEMDAIRVEI 248
Query: 120 RDIARGSSFNGENWLRT 136
I + + G L
Sbjct: 249 GRIGQATEAMGRRILGG 265
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 44/111 (39%)
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
+ + + + + A + + ID QI+ + A +G++ +R + + +
Sbjct: 294 DVTDIAKNQIGHIPQDADHAAFQRSLENIDDQIQVISGARAALGAVQNRFAHTINHLNVT 353
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + R+ D DMA+ES Q + LS ++ +L L
Sbjct: 354 VENLCAAQSRMQDVDMAAESMNYMRGLILNQSSRAVLSQALSAPRGVLRLL 404
>gi|90418385|ref|ZP_01226297.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1]
gi|90338057|gb|EAS51708.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1]
Length = 297
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 83/224 (37%), Positives = 107/224 (47%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN SAM+A Q L IN NL Q R+S+G RV+ A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNVSAMTALQSLSMINNNLNETQSRISTGYRVNAASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV DA+GLG +K+D A GM AIDV+ IK K+ A E G D IQ+EIT+LQ QL
Sbjct: 61 GAVEDALGLGQAKLDTAYTGMKAAIDVVDEIKAKLVAAREPGVDKTKIQAEITELQGQLT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SF+GENWL G + + D + V +D ++
Sbjct: 121 SIATSASFSGENWLSIGTGIVAGTKTIVSSFNRAADASVSVSTIGVDTTKTKLFDTDNTD 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
+ ++
Sbjct: 181 GILDVGRTNGTVVSTFTITAGTTDAQVSAMISDVDEALQAMTTA 224
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 50/137 (36%), Positives = 74/137 (54%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ ++T + + A + M+S +D ++
Sbjct: 161 VSTIGVDTTKTKLFDTDNTDGILDVGRTNGTVVSTFTITAGTTDAQVSAMISDVDEALQA 220
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
T AA +G+ +R+ +Q +F+ +RD++EKGVG LVDADM ESTRL ALQTQQQL VQ
Sbjct: 221 MTTAASNLGAAKNRVDIQSEFVSTLRDSIEKGVGTLVDADMTEESTRLKALQTQQQLGVQ 280
Query: 435 ALSIVNNSTARILSLFR 451
ALSI N+S+ +L+LFR
Sbjct: 281 ALSIANSSSESLLALFR 297
>gi|13560148|emb|CAC36223.1| flagelline [Treponema sp. SO4A1]
Length = 271
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 77/196 (39%), Gaps = 3/196 (1%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
SAM +S+ L N +++SSG++++ A D+A+ ++++ M+S L+ S
Sbjct: 1 MSAMYSSRVLGVTNLAQAKDMEKLSSGMKINRAGDDASGLAVSEKMRSQIRGLNQASRNA 60
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
G S + +++A + + D+M I+ D IQ E++QL +++ IA
Sbjct: 61 QNGISFIQVSEAYLQETTDIMHRIRELAVQAANGIYSDEDRMYIQVEVSQLVAEVDRIAS 120
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ FNG N L +T + N ++ + V +
Sbjct: 121 HAQFNGMNMLTGRFARATGENTVTASMWLHIGANMDQRMQVFIGTMTAMAVGVRDIGSEK 180
Query: 185 ERYGLLDRNHKIKVEP 200
+ +
Sbjct: 181 IMTIATPDDANRSIGA 196
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 30/104 (28%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
V + + ID +K +G +R+ L I
Sbjct: 166 MTAMAVGVRDIGSEKIMTIATPDDANRSIGAIDEGLKKINKQRADLGGYQNRLELTVKGI 225
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
+ + ++ + D +MA + + + Q L+ N
Sbjct: 226 DVAAENLQAAESTIRDTEMAKQMVDFTKNRILAQAGTAMLAQAN 269
>gi|331269280|ref|YP_004395772.1| putative flagellar hook-associated protein 3 [Clostridium botulinum
BKT015925]
gi|329125830|gb|AEB75775.1| putative flagellar hook-associated protein 3 [Clostridium botulinum
BKT015925]
Length = 474
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/456 (9%), Positives = 122/456 (26%), Gaps = 27/456 (5%)
Query: 6 TN-HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN + + ++ N+ +Q + +SG + +D+ + + + +D S
Sbjct: 4 TNKMLSNNFLADMKVNLENINKIQQQNTSGKKFRKPSDDPFAVARSMQLHTDINTNKQYS 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
I S+ +D + +A +V ++ + + G + ++I+ EI + ++
Sbjct: 64 KNITDVSNWLDTTDTALGQAGNVFQRVRELLISAGNGGYTESERRAIKDEINEKVREISQ 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD-----------------------N 158
I + + T + + N
Sbjct: 124 ILNTNFGGNYIFGGTRSTTKPIEVVGGSSLENSAMTKEIVIDNSKIPKAKTIINEKNELN 183
Query: 159 GKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
G ++I + + + + + + G
Sbjct: 184 GNIEIKIEFDNTKKVAGSTSDKKNIKIDIPAKTKIYSLSDLAEQINKQISDETKNPGKFG 243
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
K + + N + + NTT+ + + + +
Sbjct: 244 EKVKAIPNIKDNTIMFVNINKPVGEETKNTFTIQSSTLGINNTTATFNSNNTQNSRLMYN 303
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
G S + + ++ ++ DS
Sbjct: 304 QKEGGELVDGPEYNQIKSRLKIEVSQGVAMDYNVSAADVIEFKNEKGDSIDLRKVLNSIT 363
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ + + K + + + + I ++G+ +RI D K
Sbjct: 364 NHLDDRDEKGTDIKNPNAIKDLLTKDLQDVTDTINNLLKIRAEVGAKQNRIEGANDRNKD 423
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ K + + D + T + + T ++Q
Sbjct: 424 GTFNMTKILSKHEDVNYTENMTDYATMLTVYMASLQ 459
>gi|146305237|ref|YP_001185702.1| flagellin domain-containing protein [Pseudomonas mendocina ymp]
gi|145573438|gb|ABP82970.1| flagellin domain protein [Pseudomonas mendocina ymp]
Length = 299
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/272 (15%), Positives = 79/272 (29%), Gaps = 3/272 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN+S++ L N L Q R+ +G R++ AAD+AA IA + + + +
Sbjct: 3 LSIHTNYSSLITQTNLSKTNNALGTNQQRLGTGFRINSAADDAAGLQIATRLNAQSRGMD 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQ 118
S + A+ +++ D++ +K+ T D ++Q+E QL +
Sbjct: 63 VAIRNTSDSISLLQTAEGALTEMTDIVQRMKDLATQAANATASEKDRDALQAEYDQLGQE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L +I + + + GE + +F + +T +
Sbjct: 123 LGNIVKNTKYAGEGLFSDGTTTDGTGGKFGAAMNFQIGASAAETLTLDVSTSLGDLATAL 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + S + + A
Sbjct: 183 DGLSAQFATPDSTTPGTEIAGADTTAANGMIDTLSDALDSIGSLRAQFGANINRLNHTAN 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
T A S S
Sbjct: 243 NLSNMKDNTDMAKGRIMDADFAKESANMSKNS 274
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/291 (10%), Positives = 77/291 (26%)
Query: 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
L L ++ ++ Q+ ++ I
Sbjct: 8 NYSSLITQTNLSKTNNALGTNQQRLGTGFRINSAADDAAGLQIATRLNAQSRGMDVAIRN 67
Query: 220 KKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
++ A T + A + + + +
Sbjct: 68 TSDSISLLQTAEGALTEMTDIVQRMKDLATQAANATASEKDRDALQAEYDQLGQELGNIV 127
Query: 280 IRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGY 339
+ + + + + + + ++G + T +
Sbjct: 128 KNTKYAGEGLFSDGTTTDGTGGKFGAAMNFQIGASAAETLTLDVSTSLGDLATALDGLSA 187
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
T + T A + A M+ + + + + G+ +R++ + + M
Sbjct: 188 QFATPDSTTPGTEIAGADTTAANGMIDTLSDALDSIGSLRAQFGANINRLNHTANNLSNM 247
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+D + GR++DAD A ES +S Q + L ++SL
Sbjct: 248 KDNTDMAKGRIMDADFAKESANMSKNSMLLQSGISMLKQAGQMPGMVMSLL 298
>gi|103488415|ref|YP_617976.1| flagellin-like protein [Sphingopyxis alaskensis RB2256]
gi|98978492|gb|ABF54643.1| flagellin-like protein [Sphingopyxis alaskensis RB2256]
Length = 272
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/223 (21%), Positives = 80/223 (35%), Gaps = 3/223 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN SA+ A R + +R+SSG R++ A D+AA +IA M + L
Sbjct: 1 MTVINTNVSALRAQNNSRVASQMQSQAMERLSSGKRINAAKDDAAGLAIATRMDATARGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ G S A + D++ ++ TD ++Q+E+T L S
Sbjct: 61 TQAIRNANDGISLAQTADSAAGSISDILVRMRELAVQSANGTNGTTDRAALQTEVTALIS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ DIA + FNG L + G + +Q T + +
Sbjct: 121 QIGDIATRTEFNGNVLLDGSAATGFDIQTGINSGDVVNITIADMQATALGVGTLDISTAA 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+S + + ++ S D + T
Sbjct: 181 GASGALATLDTAIQTVATQRANLGAQQNRLTSAVDNLTSTVTN 223
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/272 (15%), Positives = 81/272 (29%)
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T L + +V Q+ + + K + A
Sbjct: 1 MTVINTNVSALRAQNNSRVASQMQSQAMERLSSGKRINAAKDDAAGLAIATRMDATARGL 60
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
QA A + L + + + +A + G +D T ++ S
Sbjct: 61 TQAIRNANDGISLAQTADSAAGSISDILVRMRELAVQSANGTNGTTDRAALQTEVTALIS 120
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G + GN + ++ + T +
Sbjct: 121 QIGDIATRTEFNGNVLLDGSAATGFDIQTGINSGDVVNITIADMQATALGVGTLDISTAA 180
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ +DT I+ +G+ +R+ D + + + R+ DAD + ES
Sbjct: 181 GASGALATLDTAIQTVATQRANLGAQQNRLTSAVDNLTSTVTNLAESKSRIEDADFSVES 240
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
T L+A Q + L+ N ST +++L R
Sbjct: 241 TNLAAAGILAQASTAMLAQANQSTQGVMNLLR 272
>gi|268316371|ref|YP_003290090.1| flagellin domain-containing protein [Rhodothermus marinus DSM 4252]
gi|262333905|gb|ACY47702.1| flagellin domain protein [Rhodothermus marinus DSM 4252]
Length = 274
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN ++ A L+ N L + Q R+++G R++ A D++A +SIA +K+
Sbjct: 6 MTRINTNLQSLQAYTYLQRTNSELGLRQLRLATGSRINRAEDDSAGYSIAAKLKAKIRGQ 65
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
IG S + +A+ ++ ++++ T+K K + +I++++ L +
Sbjct: 66 EQALANIGDAKSLLTVAEGSLNSIMEILQTMKEKAVQAANDTMGTSERAAIKNQLDALAA 125
Query: 118 QLRDIARGSSFNGENWLRTDL 138
++ DI + FNG +
Sbjct: 126 EIDDIVGETEFNGTALFTSST 146
Score = 74.0 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 60/179 (33%)
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
++ A RA KN + + + V + + T ST
Sbjct: 95 TMKEKAVQAANDTMGTSERAAIKNQLDALAAEIDDIVGETEFNGTALFTSSTLTFQVNAE 154
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ + + + ++ ID I+ IG R+
Sbjct: 155 QGDTFQVTIGSLSASGLSVASLNVSSASSAGSAIAKIDAAIQTVADKLADIGDYQKRLSF 214
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ D + +D E R+ DAD A E +L+ LQ QQ V AL+ N + IL LF
Sbjct: 215 KLDNLATAKDNYEAARSRIADADFAYEQMQLAKLQILQQTGVAALAQANAAPQAILQLF 273
>gi|149184175|ref|ZP_01862493.1| flagellin-like protein [Erythrobacter sp. SD-21]
gi|148831495|gb|EDL49928.1| flagellin-like protein [Erythrobacter sp. SD-21]
Length = 275
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 3/150 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN A+ A+ L +R+S+G R++ A D+AA +IA M S +
Sbjct: 1 MNVINTNIGALKATNASNQAGKALSTAMERLSTGKRINSAKDDAAGLAIATSMTSQVRGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQS 117
+ G S A+ +++ +++ + + +++SE+ L +
Sbjct: 61 NQGIRNANDGISLAQTAEGALNEVTNMLQRQRELAVQASNDTYSTTDLGNLKSEMDALNT 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAK 147
Q+ + SSFNG+N G++ +
Sbjct: 121 QITKVLTNSSFNGQNLFDATAGTAGVVTIQ 150
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 40/87 (45%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ DT I+ + +G+ +++ + + + R+ DAD ++E+T L+
Sbjct: 189 IALFDTAIETISTVRAGLGASQNQLESAVNNLNDNITNLSDARSRIEDADYSAETTSLAK 248
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q Q + L+ N S +LSL R
Sbjct: 249 SQILSQASSAMLAQANQSQQNVLSLLR 275
>gi|9296982|sp|Q46113|FLA2_CAMJE RecName: Full=Flagellin A
gi|452832|emb|CAA82523.1| flagellin A [Campylobacter jejuni]
Length = 575
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 78/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +I ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIKDSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + +
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKASIGATQSSKIGLTRFETGSRISVGG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + +
Sbjct: 185 EVQFTLKNYNGIDDFKFQKVVISTSVGT 212
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + I + + V+ ++ D D
Sbjct: 479 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVD 538
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A++ N+ +L L +
Sbjct: 539 FAAESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ 575
>gi|86153031|ref|ZP_01071236.1| flagellin A [Campylobacter jejuni subsp. jejuni HB93-13]
gi|85843916|gb|EAQ61126.1| flagellin A [Campylobacter jejuni subsp. jejuni HB93-13]
Length = 575
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 93/279 (33%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANSDLNAKSLDSSLARLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINKLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGGFTNQEFQIGSSSNQTVKATIGATQSSKIGVTRFETGSQSFTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + + + I+ K + +K A
Sbjct: 185 VVGLTIKNYNGIEDFKFDNVVISTSVGTGLGALAEEINKNADKTGVRATYDVKTTGAYAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + + G + S +
Sbjct: 245 KAGTTSQDFAINGVIIGKVDYKDGDNNGSLISAINAVKD 283
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 68/206 (33%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
I A + G + + + SA + G+ + S +
Sbjct: 370 GQISAANADAMGFNSYNGGGAKQILQASSISAFMSQAGSGFSAGSGFSAGSGKGYSTILS 429
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+V V +T T + S ++ T ++ H T ++
Sbjct: 430 GSVQIVSSTASMSSTYVISEGSGFSAGSGNSQFAALKTSTVSAHEATAGVTTLKGAMAVM 489
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+T I IGSI +++ + I + + V+ ++ D D ASES S
Sbjct: 490 DIAETAITNLDQIRADIGSIQNQVTSTINNITVTQVNVKSAESQIRDVDFASESANYSKA 549
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q A++ N+S +L L +
Sbjct: 550 NILAQSGSYAMAQANSSQQNVLRLLQ 575
>gi|153847192|ref|ZP_01993920.1| polar flagellin [Vibrio parahaemolyticus AQ3810]
gi|149744746|gb|EDM56214.1| polar flagellin [Vibrio parahaemolyticus AQ3810]
Length = 121
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 42/101 (41%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
+ + + +E ++ ID +K + ++G+ +R + + + + V R
Sbjct: 20 DHYPSIGDMYEIEGRIASIDAALKYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSR 79
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ D D A E+T ++ Q Q + L+ + LSL
Sbjct: 80 IKDTDFAKETTAMTKSQILSQASSSILAQAKQAPNSALSLL 120
>gi|903604|gb|AAB03518.1| flagellin [Borrelia crocidurae]
Length = 335
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNAINVANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
S + + + + + V+ +K SIQ E+ QL ++
Sbjct: 63 SRNTSKAINIIHTTEGNLDEVEKVLVRMKELAVQSGNGTYSDAVRGSIQIEVEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNHMHMLSNRSSAEHVRTAE 149
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 37/101 (36%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ +G+ +R+ + + + ++ ++
Sbjct: 235 SPVNVTTAVDANMSLTKIEDAIRMIADQRANLGAFQNRLESVKASTEYAIENLKASYAQI 294
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DA M E + Q A+ ++ N +LSL R
Sbjct: 295 KDATMTDEIVASTTNSILTQSAMAMIAQANQVPQYVLSLLR 335
>gi|1322142|dbj|BAA07832.1| flagellin protein [Borrelia miyamotoi]
gi|51243476|gb|AAT99442.1| flagellin [Borrelia miyamotoi]
Length = 334
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + S LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVAGKLNSQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSAAQNVKTAE 149
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 37/101 (36%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + +S I+ I+ T +G+ +R+ + + ++ ++
Sbjct: 234 SPINVTTAIDANMSLSKIEDAIRMVTDQRANLGAFQNRLESVKASTDYAIENLKASYAQV 293
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DA M E + Q A+ ++ N +LSL R
Sbjct: 294 KDAIMTDEIVASTTNSILTQSAMAMIAQANQVPQYVLSLLR 334
>gi|228907|prf||1814303A flagellin
Length = 556
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 77/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+ + +I ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDRSGMAIKDSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + +
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKASIGATQSSKIGLTRFETGSRISVGG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + +
Sbjct: 185 EVQFTLKNYNGIDDFKFQKVAISTSVGT 212
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 51/174 (29%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
I + A + G SV+A + G S + S +
Sbjct: 370 GQIDANVADAMGFNSANKGNILGGYSSVSAYMSSTGSGFSTGSGFSVGSGKNYSTGFANS 429
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
++ + + + S + + + + T ++
Sbjct: 430 IAISAASQLSAVYNVSAGSGFSSGSNLSQFATMKTSAGNTLGVKDETAGVTTLKGAMAVM 489
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+T I IGS+ +++ + + I + + V+ + D D A+E
Sbjct: 490 DIAETAITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFAAEV 543
>gi|150019101|ref|YP_001311355.1| flagellin domain-containing protein [Clostridium beijerinckii NCIMB
8052]
gi|149905566|gb|ABR36399.1| flagellin domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 269
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 3/164 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N SAM+A +++ +++SSG R++ A D+AA +I++ M+S L+
Sbjct: 2 VINHNLSAMNAHRQMGINTNASSKAVEKLSSGQRINRAGDDAAGLAISEKMRSQIRGLNQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
S G S V A+ +++ ++ +K T IQ E+ QL S++
Sbjct: 62 GSTNAQDGISLVQTAEGALTETHSMLQRLKTLATQSANGTNQNSDRDLIQKEVDQLTSEV 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
IA + FNG+N L T + KS I
Sbjct: 122 SRIATQTEFNGKNILNTSNSVAFQVGNKSGQEIKIVMQTMTATK 165
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 37/96 (38%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + ++ I++ I + +G++ +R+ + ++ R+ D DM
Sbjct: 174 DTATNAKAALAKIESAITEVSKHRATLGAVQNRLEHTITSTDNTSENLQAAESRIRDTDM 233
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A E + Q A L+ N + +L L +
Sbjct: 234 AKEMMEYTKDNVLTQAAQSMLAQANQTPNNVLKLLQ 269
>gi|328948253|ref|YP_004365590.1| flagellin domain protein [Treponema succinifaciens DSM 2489]
gi|328448577|gb|AEB14293.1| flagellin domain protein [Treponema succinifaciens DSM 2489]
Length = 284
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/206 (19%), Positives = 76/206 (36%), Gaps = 3/206 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N S+M A++ L N L +++SSG +++ A D+A+ ++++ M+S L+
Sbjct: 2 VINHNMSSMFANRTLGVSNSQLMGNIEKLSSGEKINRAGDDASGLAVSEKMRSQIRGLNQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
+ I G S + + + + D++ I+ D IQ E++QL +++
Sbjct: 62 ANRNIQNGVSFIQATEGYLQETTDILQRIRELSVQSANGIYSDEDRMQIQVEVSQLVAEV 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FNG N L ++ + D
Sbjct: 122 DRIASQAQFNGMNLLTGRFAENSVTNNVMTFQVGANMDQRVTAFIGTMTAQALGLKGTQG 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKD 205
+ + N I LK
Sbjct: 182 TDEQISISTPDTANMAIGAIDAALKS 207
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 46/138 (33%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ +D R + ++ + + + ID +K
Sbjct: 147 NNVMTFQVGANMDQRVTAFIGTMTAQALGLKGTQGTDEQISISTPDTANMAIGAIDAALK 206
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R + + I + + ++ + D DMA+E + Q
Sbjct: 207 SVSRQRADLGAYQNRFEMASNGIAVAAENMQGAESGIRDTDMAAEMVEYTKNSILAQSGT 266
Query: 434 QALSIVNNSTARILSLFR 451
L+ N+ + +L+L +
Sbjct: 267 AMLAQANSQSQNVLALLQ 284
>gi|3290038|gb|AAC25644.1| flagellin A [Campylobacter jejuni]
Length = 576
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 76/208 (36%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNGAALNAKANSDLNAKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINKLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFTNQEFQIGASSNQTVKATIGATQSSKIGVTRFETGAQSFTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
G + +
Sbjct: 185 VVGLTIKNYNGIEDFKFDNVVISTSVGT 212
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/328 (11%), Positives = 81/328 (24%)
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F + S+I + + + D D
Sbjct: 249 TSQEFAINGVTIGKIEYKDGDGNGSLISAINAVKDTTGVQASKDENGKLVLTSADGRGIK 308
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + V IS + + ++ +
Sbjct: 309 ITGDIGVGSGILANQKENYGRLSLVKNDGRDINISGTNLSAIGMGTTDMISQSSVSLRES 368
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A G + SA G+ + S +
Sbjct: 369 KGQISATNADAMGFNSYKGGGKFVFTQNVSSISAFMSAQGSGFSRGSGFSVGSGKNLSVG 428
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + +T + S ++ T T
Sbjct: 429 LSQGIQIISSAGSMSNTYVVSAGSGFSSGSGNSQFAALKTTAANTTDETAGVTTLKGAMA 488
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ +T I IGSI +++ + I + + V+ ++ D D ASES S
Sbjct: 489 VMDIAETAITNLDQIRADIGSIQNQVTSTINNITVTQVNVKAAESQIRDVDFASESANYS 548
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A++ N+S +L L +
Sbjct: 549 KANILAQSGSYAMAQANSSQQNVLRLLQ 576
>gi|86151038|ref|ZP_01069254.1| flagellin subunit protein FlaA [Campylobacter jejuni subsp. jejuni
260.94]
gi|315124778|ref|YP_004066782.1| flagellin subunit protein FlaA [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85842208|gb|EAQ59454.1| flagellin subunit protein FlaA [Campylobacter jejuni subsp. jejuni
260.94]
gi|315018500|gb|ADT66593.1| flagellin subunit protein FlaA [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 577
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 93/279 (33%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANSDLNAKSLDSSLARLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINKLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGGFTNQEFQIGSSSNQTVKATIGATQSSKIGVTRFETGSQSFTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + + + I+ K + +K A
Sbjct: 185 VVGLTIKNYNGIEDFKFDNVVISTSVGTGLGALAEEINKNADKTGVRATYDVKTTGAYAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + + G + S +
Sbjct: 245 KAGTTSQDFAINGVIIGKVDYKDGDNNGSLISAINAVKD 283
Score = 95.6 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 50/138 (36%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T T + S + ++ T ++ H T ++ +T I
Sbjct: 440 TASMSSTYVISAGSGFSVGSGNSQFAALKTSTVSAHEATAGVTTLKGAMAVMDIAETAIT 499
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
IGSI +++ + I + + V+ ++ D D ASES S Q
Sbjct: 500 NLDQIRADIGSIQNQVTSTINNITVTQVNVKSAESQIRDVDFASESANYSKANILAQSGS 559
Query: 434 QALSIVNNSTARILSLFR 451
A++ N+S +L L +
Sbjct: 560 YAMAQANSSQQNVLRLLQ 577
>gi|120597314|ref|YP_961888.1| flagellin domain-containing protein [Shewanella sp. W3-18-1]
gi|146294541|ref|YP_001184965.1| flagellin domain-containing protein [Shewanella putrefaciens CN-32]
gi|120557407|gb|ABM23334.1| flagellin domain protein [Shewanella sp. W3-18-1]
gi|145566231|gb|ABP77166.1| flagellin domain protein [Shewanella putrefaciens CN-32]
Length = 267
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/263 (14%), Positives = 78/263 (29%), Gaps = 3/263 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M + TN++++ A + N L +R+S+GLR++ A+D+AA IA M ++ +
Sbjct: 1 MLGVHTNYASIVAQGAVNKSNNLLTNAMERLSTGLRINSASDDAAGLQIANRMNANVKGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQS 117
S I +S + A + + + + K T D ++ +E +L
Sbjct: 61 ETASRNISDATSMLQTADGALEELTTIANRQKELATQAANGVNSADDLTALDAEFKELNK 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ I +++ G N T I + L
Sbjct: 121 EISRILDNTTYAGNNLFTKLEAGVTFQIGAGTAETLAVTTTAIDDAALAAGDLTTGANAA 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ D +R+ ++ T + +
Sbjct: 181 ITLVDTFLAAVGTERSTLGANINRLGHTAANLASVTENTKAAAGRIMDADFAVESANMTR 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPN 260
+ T+
Sbjct: 241 NQLLVQAGTTVLSSANQNTGLVM 263
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 39/94 (41%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
++ +DT + +G+ +R+ + + + + GR++DAD A
Sbjct: 174 TTGANAAITLVDTFLAAVGTERSTLGANINRLGHTAANLASVTENTKAAAGRIMDADFAV 233
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ES ++ Q Q LS N +T ++ L R
Sbjct: 234 ESANMTRNQLLVQAGTTVLSSANQNTGLVMGLLR 267
>gi|13560150|emb|CAC36205.1| flagelline [Treponema maltophilum]
Length = 274
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 76/196 (38%), Gaps = 3/196 (1%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
SAM +++ L N +++SSG++++ A D+A+ ++++ M+S L+ S
Sbjct: 1 MSAMYSNRVLGVTNLAQAKDMEKLSSGMKINRAGDDASGLAVSEKMRSQIRGLNQASRNA 60
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
G S + +++ + + D+M I+ D IQ E++QL +++ IA
Sbjct: 61 QNGISFIQVSEGYLQETTDIMHRIRELAVQSSNGIYSDEDRMQIQVEVSQLVAEVDRIAS 120
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ FNG N L +T + N ++ + V +
Sbjct: 121 HAQFNGMNMLTGRFARATGENTVTGSMWLHIGANMDQRMQVFIGTMTAMAVGVREIGSEK 180
Query: 185 ERYGLLDRNHKIKVEP 200
+ +
Sbjct: 181 VMSIAAPDDANRAIGT 196
Score = 80.6 bits (196), Expect = 6e-13, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 30/93 (32%)
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
+ + ID +K +G+ +R+ + + + + + + D
Sbjct: 182 MSIAAPDDANRAIGTIDEGLKKINKQRADLGAYQNRLEMTVKGLDVAAENTQAAESTIRD 241
Query: 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445
DMA + + Q L+ N +T
Sbjct: 242 TDMAKQMVDFMKNRILAQAGTAMLAPWNVTTQN 274
>gi|302343782|ref|YP_003808311.1| flagellin domain protein [Desulfarculus baarsii DSM 2075]
gi|301640395|gb|ADK85717.1| flagellin domain protein [Desulfarculus baarsii DSM 2075]
Length = 563
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 53/378 (14%), Positives = 105/378 (27%), Gaps = 11/378 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A +A++ L ++ +L R+SSGLR++ AAD+AA ++ ++M++D AL+
Sbjct: 5 INHNMMASNAARNLSNVYGDLATSVQRLSSGLRINSAADDAAGLAVREMMRADVAALNQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+ MS + + +K + SE + +++
Sbjct: 65 IRNASDAISMIQTAEGAMSVIDEKLIRMKELAEQAATGTYTTAQRLIMDSEYQAMAAEID 124
Query: 121 DIARGSSFNGENW--------LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
IA + FNG + G ++ T+I
Sbjct: 125 RIANATDFNGIKLLDGSLLTQHDGSGLKVHFGTGNEAAEDYYYVSIGDMKATSITGLQVG 184
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
++ T + ++ ++ T
Sbjct: 185 GGAGEGATWRTTGLDMAASTDAMANNGTFGIQTSTDGTTWSNYGFLTVDAGDTLDDVVDK 244
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT 292
A + A A + + ++A I + N
Sbjct: 245 VNAGNAATNSITFAAGSSSTDLAGDTITVNGHAFTFSTGTSTSTANTIGIQNLGSVASIA 304
Query: 293 TKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANT 352
+ + V T + T + +D D+ S T A
Sbjct: 305 AATQFAINTWASVGNADGVYATINATASSLTVNLTDRDFGASTDTLASSNTTLTLGGATF 364
Query: 353 DAYNEKLAMEEMVSFIDT 370
+ D
Sbjct: 365 SGGGTDTTSVTASAVADA 382
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 50/413 (12%), Positives = 112/413 (27%), Gaps = 15/413 (3%)
Query: 33 SGLRV-----SDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
SGL+V ++AA++ Y SI + + L V G G++ M+ + D
Sbjct: 149 SGLKVHFGTGNEAAEDYYYVSIGDMKATSITGL-QVGGGAGEGATW-RTTGLDMAASTDA 206
Query: 88 MSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
M+ GT + L D+ + +++ + A
Sbjct: 207 MANNGTFGIQTSTDGTTWSNYGFLTVDAGDTLDDVVD-------KVNAGNAATNSITFAA 259
Query: 148 SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
+ + D V + T ++ +
Sbjct: 260 GSSSTDLAGDTITVNGHAFTFSTGTSTSTANTIGIQNLGSVASIAAATQFAINTWASVGN 319
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
A+ + + T + + + + + + ++
Sbjct: 320 ADGVYATINATASSLTVNLTDRDFGASTDTLASSNTTLTLGGATFSGGGTDTTSVTASAV 379
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
+ + + + T + T+ T
Sbjct: 380 ADADGSGYELQLTGGTGVQVRLVQTNGAAFTASTATVGGTPTTGTTVSSMALNTGAAAYV 439
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+ DS + + + A + ++ ID I A +GS +
Sbjct: 440 SDWADGDEDSEWFSIGSTGPTWDGAH-IQTQSAAQLALAQIDAAISKKDTARASLGSTQN 498
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
R+ +++ + ++ R+ D D+A E T + Q AV L+ N
Sbjct: 499 RLENTITNLQIQAENLQAAESRISDVDVALEMTEFTRNNILTQAAVSMLAQAN 551
>gi|110227193|gb|ABG56546.1| LafA2 [Aeromonas hydrophila]
Length = 287
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 65/147 (44%), Gaps = 3/147 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN ++++ +L N L R+ +GLR++ AAD+AA +A ++S +
Sbjct: 3 LSIHTNFASLTTQSQLNSTNKMLGTAMQRLGTGLRINSAADDAAGLQMATRLQSQSSGQK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
S + + M + +++ +K+ T D K++ +E +L+++
Sbjct: 63 VGMRNAQDAISMMQTGEGAMDEMSNIVQRMKDLATQSANGTSTTEDRKAMNAEFVELRAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASI 145
L +I ++F G+ L G
Sbjct: 123 LDNITTNTTFGGQTLLAKGTGFQGNVT 149
Score = 87.5 bits (214), Expect = 5e-15, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 45/97 (46%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+++ ++ +DT K A G+ +R+ + + M++ + GR++DAD
Sbjct: 191 IDDRGKATAAMAELDTFSKGIGEARSAFGANINRLEHTVNNLSNMKENTDLANGRIMDAD 250
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A EST ++ Q Q + LS N T + SL R
Sbjct: 251 FAQESTNMTKNQMLMQAGMSVLSNSNQMTGMVTSLLR 287
>gi|238916230|ref|YP_002929747.1| flagellin [Eubacterium eligens ATCC 27750]
gi|238871590|gb|ACR71300.1| flagellin [Eubacterium eligens ATCC 27750]
Length = 270
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/262 (15%), Positives = 97/262 (37%), Gaps = 3/262 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N SAM+ ++++ + L+ +++SSG +++ AAD+AA SI++ M++ L
Sbjct: 2 VVQHNLSAMNTNRQMGIVTDALQKSTEKLSSGYKINRAADDAAGLSISEKMRAQIRGLDK 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
SD G S + +A+ +++ ++ + T TD +I++EI QL S++
Sbjct: 62 ASDNAQDGISLIQVAEGALNETHSILQRMNELATQAANDTNTSTDRTAIKAEIDQLTSEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I + FN +N L I + + T L +
Sbjct: 122 NRIQSTTQFNTQNLLDGKFTGKNLQIGSLKGQTIKISISNMNAKTLGVSGLTVDKNSTAG 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + + + ++ ++ + T + + +
Sbjct: 182 ISMSKIQAAIDKVSTQRSNLGALQNRLEHTINNLDTTSENTSAAESRIRDTDMADEMVRY 241
Query: 240 DQAKGIATIPVPLPAAPAAPNT 261
+ ++ + A
Sbjct: 242 SKNNILSQAGNSMLAQANQQTQ 263
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 36/97 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +S I I + +G++ +R+ + + + R+ D D
Sbjct: 174 VDKNSTAGISMSKIQAAIDKVSTQRSNLGALQNRLEHTINNLDTTSENTSAAESRIRDTD 233
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E R S Q L+ N T +LSL +
Sbjct: 234 MADEMVRYSKNNILSQAGNSMLAQANQQTQGVLSLLQ 270
>gi|209547938|ref|YP_002279855.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533694|gb|ACI53629.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 303
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 84/146 (57%), Positives = 103/146 (70%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AM+A Q LR IN LE Q+RVSSG RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNVAAMAALQTLRGINDGLEATQNRVSSGYRVEKASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A + M AID++S IK KI A E+G D +Q EI QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYSAMDSAIDIISEIKAKIVAATEKGVDKTKVQEEIGQLQQQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA+ +SF+GENW+ G+ +
Sbjct: 121 SIAQSASFSGENWVAGADGTKSVVST 146
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 49/138 (35%), Positives = 79/138 (57%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+DS + + + ++ + + + ++ I+ +
Sbjct: 165 DSSSTGNVLFGMDSVGSIETSSGIIGTSYGTIGSIYSMDISSFGSVEISMALTSIEAGLD 224
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
T AA ++GSIS+RI LQE+F+ + D+++ GVGRLVDA+M ES++L+ALQTQQQLA+
Sbjct: 225 AMTKAASQLGSISTRIELQENFVGALSDSIDSGVGRLVDANMEEESSKLTALQTQQQLAI 284
Query: 434 QALSIVNNSTARILSLFR 451
Q+LSI N+S IL+LFR
Sbjct: 285 QSLSIANSSAQNILTLFR 302
>gi|124516965|emb|CAJ90397.1| flagellin [Escherichia coli]
gi|124516967|emb|CAJ90398.1| flagellin [Escherichia coli]
gi|124516969|emb|CAJ90399.1| flagellin [Escherichia coli]
gi|124516971|emb|CAJ90400.1| flagellin [Escherichia coli]
Length = 212
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 54/137 (39%), Gaps = 3/137 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
+L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 SQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISVAQTTEG 60
Query: 80 GMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ + + I+ SIQ+EITQ ++ ++ + FNG L
Sbjct: 61 ALNEINNNLQRIRELSVQATNGTNSDSDLSSIQAEITQRLEEIDRVSEQTQFNGVKVLAE 120
Query: 137 DLGSSTASIAKSVIGSF 153
+ A
Sbjct: 121 NNEMKIQVGANDGETIT 137
>gi|434918|emb|CAA53015.1| flagellin [Borrelia crocidurae]
Length = 335
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNAINVANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + + + V+ +K D SIQ E+ QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLDEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEVEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNHMHMLSNRSSAEHVRTAE 149
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 38/101 (37%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ T +G+ +R+ + + + ++ ++
Sbjct: 235 SPVNVTTAVDANMSLTKIEDAIRMITDQRANLGAFQNRLESVKASTEYAIENLKASYAQI 294
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DA M E + Q A+ ++ N +LSL R
Sbjct: 295 KDATMTDEIVASTTNSILTQSAMAMIAQANQVPQYVLSLLR 335
>gi|312884817|ref|ZP_07744509.1| hypothetical protein VIBC2010_03932 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367469|gb|EFP95029.1| hypothetical protein VIBC2010_03932 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 280
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/268 (14%), Positives = 89/268 (33%), Gaps = 3/268 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN++++ L N L +R+S+G R++ AAD+AA SIA ++S N +S
Sbjct: 3 LSMHTNYASLVTQNTLNSTNGMLTSAMERLSTGYRINSAADDAAGLSIANKLESQNRGMS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
S + A + + ++ +K+ T G + +++ +E +L +
Sbjct: 63 VAMRNSQDAISMLQTADGALEELTNIAYRMKDLATQGANGTNGAKELEALDAEYGELAKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
I +S+ L ++A + + + T + T +
Sbjct: 123 ATRILDNTSYGAGQLLLKGGKLASAVTFQIGASKNEKLEVDLSGGITALDFSVGGTGNIA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ TD T +D + + ++ + + ++ A
Sbjct: 183 ALTDNTVANDQIDVVQGLFDKVNTVRSALGANINRLDHTINNLSNISENMAAAKGRITDA 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTS 266
+ + +
Sbjct: 243 DFAVESSNMTKNQMLMQAGTTVLSQTNQ 270
Score = 94.0 bits (231), Expect = 5e-17, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 39/102 (38%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
N A + + + + +G+ +R+ + + + + + GR
Sbjct: 179 GNIAALTDNTVANDQIDVVQGLFDKVNTVRSALGANINRLDHTINNLSNISENMAAAKGR 238
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ DAD A ES+ ++ Q Q LS N T +SL R
Sbjct: 239 ITDADFAVESSNMTKNQMLMQAGTTVLSQTNQLTGMAISLLR 280
>gi|167005901|ref|ZP_02271659.1| hypothetical protein Cjejjejuni_07040 [Campylobacter jejuni subsp.
jejuni 81-176]
Length = 576
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 92/279 (32%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANSDLNAKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINKLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFTNQEFQIGASSNQTVKATIGATQSSKIGVTRFETGAQSFTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + + + I+ K + +K
Sbjct: 185 VVGLTIKNYNGIEDFKFDNVVISTSVGTGLGALAEEINKSADKTGVRATYDVKTTGVYAI 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ + N G + + S +
Sbjct: 245 KEGTTSQDFAINGVVIGQINYKDGDNNGQLVSAINAVKD 283
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 37/328 (11%), Positives = 81/328 (24%)
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F + + ++ + + + D D
Sbjct: 249 TSQDFAINGVVIGQINYKDGDNNGQLVSAINAVKDTTGVQASKDENGKLVLTSADGRGIK 308
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + V IS + + ++ +
Sbjct: 309 ITGDIGVGSGILANQKENYGRLSLVKNDGRDINISGTNLSAIGMGTTDMISQSSVSLRES 368
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A G + SA G+ + S +
Sbjct: 369 KGQISATNADAMGFNSYKGGGKFVFTQNVSSISAFMSAQGSGFSRGSGFSVGSGKNLSVG 428
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + +T + S ++ T T
Sbjct: 429 LSQGIQIISSAASMSNTYVVSAGSGFSSGSGNSQFAALKTTAANTTDETAGVTTLKGAMA 488
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ +T I IGSI +++ + I + + V+ ++ D D ASES S
Sbjct: 489 VMDIAETAITNLDQIRADIGSIQNQVTSTINNITVTQVNVKAAESQIRDVDFASESANYS 548
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A++ N+S +L L +
Sbjct: 549 KANILAQSGSYAMAQANSSQQNVLRLLQ 576
>gi|87242500|gb|ABD33789.1| flagellin [Bacillus weihenstephanensis]
Length = 239
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 71/184 (38%), Gaps = 3/184 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ +R+SSG R++ AAD+AA +IA M++ L S G S + A + +
Sbjct: 1 DKMNTSMNRLSSGKRINSAADDAAGLAIATRMRAKENGLGVASRNTQDGISLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ G D + E QL+ Q+ IA+ ++FNG+ L
Sbjct: 61 NSVSNILLRMRDLAVQSANGTNSGDDRTATNKEFGQLKEQIDYIAKNTAFNGKTLLDGSA 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
S + G+ + T +D ++D + + + +
Sbjct: 121 SSKVSIKTYDDGGADDIEIKLTNVQQTALTGDSKTLKAIDVTSDANAKDAIKAIDGMVNS 180
Query: 199 EPQV 202
Sbjct: 181 IASS 184
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 32/79 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ + ID + ++ ++G+ +R+ + ++ ++ DAD
Sbjct: 161 VTSDANAKDAIKAIDGMVNSIASSRAELGATLNRLDFNVANLNSQASSMASSASQIEDAD 220
Query: 415 MASESTRLSALQTQQQLAV 433
MA E + ++ + + +
Sbjct: 221 MAKEMSEMTKFKILNEAGI 239
>gi|114054840|gb|ABI50020.1| FlaA [Clostridium botulinum]
Length = 262
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+++ N +++SSGLR++ A D+AA +I++ M+ L+ S S
Sbjct: 1 HRQMAINTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQASRNSQDAISL 60
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNG 130
+ A+ +++ ++ ++ D +++Q E+ +LQS++ I+ + FN
Sbjct: 61 IQTAEGALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEINRISSQTQFNT 120
Query: 131 ENWLRTDLGSSTASIA 146
++ + + ++
Sbjct: 121 KSLINGAVSEDAXAMT 136
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 45/132 (34%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D + T + + I + + + + + ++ ID I +
Sbjct: 131 DAXAMTFQIGANSGQTIKLTIGSMDAKTLKVDKIKLDDTAANVTKQIATIDNAINSVSKE 190
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 191 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 250
Query: 439 VNNSTARILSLF 450
N + +L L
Sbjct: 251 ANQAPQGVLQLL 262
>gi|218508858|ref|ZP_03506736.1| flagellin C protein [Rhizobium etli Brasil 5]
Length = 323
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 74/136 (54%), Positives = 91/136 (66%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M+A Q LR IN L+ Q VSSG RV AADNAAYWSIA M+SDN ALSAVSDA+GLG
Sbjct: 1 MAALQTLRGINQGLQTTQAHVSSGYRVGKAADNAAYWSIATTMRSDNKALSAVSDALGLG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
++KVD A + M AIDV+ IK K+ A E G D +Q EI+QLQ QL IA+ +SF+G
Sbjct: 61 AAKVDTAYSAMDSAIDVVGDIKAKLVAATENGVDKAKVQEEISQLQQQLLSIAQSASFSG 120
Query: 131 ENWLRTDLGSSTASIA 146
ENW+ G+ +
Sbjct: 121 ENWVAGADGTKNVVAS 136
>gi|218135304|ref|ZP_03464108.1| hypothetical protein BACPEC_03209 [Bacteroides pectinophilus ATCC
43243]
gi|217990689|gb|EEC56700.1| hypothetical protein BACPEC_03209 [Bacteroides pectinophilus ATCC
43243]
Length = 270
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/262 (17%), Positives = 96/262 (36%), Gaps = 3/262 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N SAM+ +++L + +++SSG R++ A D+AA SI++ M+S L+
Sbjct: 2 VVQHNLSAMNTNRQLSGVQSAQSKSTEKLSSGYRINRAGDDAAGLSISEKMRSQIRGLNK 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
S G S V +A+ +++ ++ + T TD +IQ+EI QL S++
Sbjct: 62 ASSNAQDGISLVQVAEGALNETHSILQRMNELATQAANDTNTSTDRTAIQAEIDQLTSEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I + FN N L S + S + L +
Sbjct: 122 NRIQSTTQFNTMNLLDGTFSSKNLQVGSLSGQSIGISIKNMNASSLGVDALKVSSFASAG 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S+ + + + + + ++ ++ + + T + + + +
Sbjct: 182 SSMDKIQSAINLVSTQRSTLGALQNRLEHTINNLNTTAENTQAAESRIRDVDMATEMVEY 241
Query: 240 DQAKGIATIPVPLPAAPAAPNT 261
+ +A + A
Sbjct: 242 SKNNILAQAGQSMLAQANQATQ 263
Score = 96.3 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 37/96 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + I + I + +G++ +R+ + + + + R+ D D
Sbjct: 174 VSSFASAGSSMDKIQSAINLVSTQRSTLGALQNRLEHTINNLNTTAENTQAAESRIRDVD 233
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA+E S Q L+ N +T +LSL
Sbjct: 234 MATEMVEYSKNNILAQAGQSMLAQANQATQGVLSLL 269
>gi|227018551|gb|ACP18868.1| flagellin [Borrelia miyamotoi]
Length = 334
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + S LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVAGKLNSQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSAAQNVKTAE 149
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 22/169 (13%), Positives = 48/169 (28%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G W + + N A V N ++ +
Sbjct: 166 GAQASWTLRVHVGANQDEAIAVNIYSANVANLFNGEGAQAAPAQEGAQQEGVQAAPAPAA 225
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + +S I+ I+ + +G+ +R+ + +
Sbjct: 226 APVQGGVNSPINVTTAIDANMSLSKIEDAIRMVSDQRANLGAFQNRLESVKSSTDYAIEN 285
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ ++ DA M E + Q A+ ++ N +LSL R
Sbjct: 286 LKASYAQIKDAIMTDEIVASTTNSILTQSAMAMIAQANQVPQYVLSLLR 334
>gi|4760475|dbj|BAA77299.1| flagellin [Pseudomonas putida]
Length = 398
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/398 (10%), Positives = 104/398 (26%), Gaps = 28/398 (7%)
Query: 44 AAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE--- 100
AA IA + S L G S A+ M + D++ ++ +
Sbjct: 1 AAGLQIANRLTSQINGLGQAVKNANDGISIAQTAEGAMQASTDILQKMRTLALSSATGSL 60
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
D KS E L ++L I+ ++F G+ L G+ + + + +
Sbjct: 61 SNDDRKSNNDEYQALTAELNRISETTTFGGQKLLDGSYGTKAIQVGANANETINLALDNV 120
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ + T+ +S + V +G+I
Sbjct: 121 SAKSIGSQQIKSGTIAPSASGVAAADLVVTGNGQSKTVSYDAGSSAKDIAAKLNGSIGGL 180
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+T + + A + + + + + +
Sbjct: 181 TASASTEVKLAVASGAAATPANFDLTVGGSTVSFIGVTDTASLADQLKSNAAKLGISVNY 240
Query: 281 RMGNSDIWVRATTKNSITSDPG-------------------------YTNSTVAKVGNTH 315
+ V++ T ++ T + + V
Sbjct: 241 DESTKSLSVKSDTGENLAFTSKAGADAISVGARDGNGDFPGTLTTLSATVNDKSTVTGQI 300
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ ++ + D + + E + + ++ ID I
Sbjct: 301 SLDSAKGYSVANGATGTGATDLFGAASKSSAKTTIADTDVTEAVNAQNALAVIDKAIGSI 360
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ +G+ +R+ D ++ ++ + D
Sbjct: 361 DSVRSGLGATQNRLQTTVDNLQNIQKNSTAARSTVQDV 398
>gi|126176145|ref|YP_001052294.1| flagellin domain-containing protein [Shewanella baltica OS155]
gi|304412497|ref|ZP_07394103.1| flagellin domain protein [Shewanella baltica OS183]
gi|307307156|ref|ZP_07586894.1| flagellin domain protein [Shewanella baltica BA175]
gi|125999350|gb|ABN63425.1| flagellin domain protein [Shewanella baltica OS155]
gi|304349139|gb|EFM13551.1| flagellin domain protein [Shewanella baltica OS183]
gi|306910395|gb|EFN40826.1| flagellin domain protein [Shewanella baltica BA175]
Length = 267
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 66/180 (36%), Gaps = 3/180 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M + TN++++ A + N L +R+S+GLR++ A+D+AA IA M ++ +
Sbjct: 1 MLGVHTNYASIVAQGAVNKSNNLLTNAMERLSTGLRINSASDDAAGLQIANRMSANVKGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQS 117
S I +S + A + + + + K T D ++ E TQL +
Sbjct: 61 ETASRNISDATSMLQTADGALEELTTIANRQKELATQAANGVNSADDLTALNDEFTQLNT 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ I +++ G N T I + L
Sbjct: 121 EITRILDNTTYAGNNLFAKLEAGVTFQIGAGTGEKLVVTTTAIDDAALAAGDLTTGANAA 180
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 39/94 (41%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
++ +DT I +G+ +R+ + + + + GR++DAD A
Sbjct: 174 TTGANAAIALVDTFIAAVGTERSTLGANINRLGHTAANLASVTENTKAAAGRIMDADFAV 233
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ES ++ Q Q LS N +T ++ L R
Sbjct: 234 ESANMTRNQLLVQAGTTVLSSANQNTGLVMGLLR 267
>gi|157373198|ref|YP_001471798.1| flagellin domain-containing protein [Shewanella sediminis HAW-EB3]
gi|157315572|gb|ABV34670.1| flagellin domain protein [Shewanella sediminis HAW-EB3]
Length = 264
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/239 (15%), Positives = 75/239 (31%), Gaps = 3/239 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN+++ A + N L +R+S+GLR++ AAD+AA IA M ++ +
Sbjct: 1 MLSVQTNNASNIAQNSVNKSNDLLSNAMERLSTGLRINSAADDAAGLQIATRMNANVVGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQS 117
+ + +S + A + + + + K T D ++ +E +L
Sbjct: 61 ETANRNVSDATSMLQTADGALDELTTIANRQKELATQAANGVNSTEDLAALDAEFQELSK 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ I + ++G T I S + N + + L
Sbjct: 121 EVTRIVTDTEYSGNKLFAELEAGVTFQIGASSGETLDVTTNAITAVAGDLKAGANAAIDL 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+ I ++ + A +
Sbjct: 181 VDTFIDEVGAERSTLGANINRLGHTASNLTNVTENTKAAAGRIMDTDFAVETANMTKNQ 239
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 38/91 (41%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ +DT I A +G+ +R+ + + + + GR++D D A E+
Sbjct: 173 GANAAIDLVDTFIDEVGAERSTLGANINRLGHTASNLTNVTENTKAAAGRIMDTDFAVET 232
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q Q LS N +T ++SL
Sbjct: 233 ANMTKNQLLVQAGTNILSSANQNTGLVMSLL 263
>gi|5107837|gb|AAD28518.2|AF128947_1 flagellin [Escherichia coli]
Length = 550
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 38/237 (16%), Positives = 72/237 (30%), Gaps = 3/237 (1%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
L + +R+SSGLR++ A D++A +IA S+ L+ + G S +
Sbjct: 1 NQSALSISIERLSSGLRINSAKDDSAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEG 60
Query: 80 GMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+S+ + + I+ +D SIQ EI ++ ++ + FNG N L
Sbjct: 61 ALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAK 120
Query: 137 DLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
D A I ++ + + +
Sbjct: 121 DGSMKIQVGANDGETITIDLKKIDSDTLGLNGFNVNGKGTITNKAATVSDLTSAGAKLNT 180
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
LK + + + T G + D +T +
Sbjct: 181 TTGLYDLKTENTLLTTDAAFDKLGNGDKVTVGGVNYTYNAKSGDFTTTKSTAGTGVN 237
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/281 (12%), Positives = 71/281 (25%)
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
D + + D + K + + L D +
Sbjct: 270 TKDGTVSFETDSAGNITIGGSQAYVDDAGNLTTNNAGSAAKADMKALLKAASEGSDGASL 329
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ A V + + TS S S
Sbjct: 330 TFNGTEYTIAKATPATTTPVAPLIPGGITYQATVSKDVVLSETKAAAATSSITFNSGVLS 389
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
T + + + TV+ N T + +
Sbjct: 390 KTIGFTAGESSDAAKSYVDDKGGITNVADYTVSYSVNKDNGSVTVAGYASATDTNKDYAP 449
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + V +N T+ + A ++ +D I +G+I +R+ +
Sbjct: 450 AIGTAVNVNSAGKITTETTSAGFATTNPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNL 509
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+ + R+ DAD A+E + +S Q QQ L+
Sbjct: 510 NNTNTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLA 550
>gi|119477946|ref|ZP_01618046.1| Flagellin and related hook-associated protein [marine gamma
proteobacterium HTCC2143]
gi|119448859|gb|EAW30101.1| Flagellin and related hook-associated protein [marine gamma
proteobacterium HTCC2143]
Length = 424
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/427 (9%), Positives = 112/427 (26%), Gaps = 32/427 (7%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
++ Q ++ + Q +++SG R+ +D+ + + + L D
Sbjct: 13 NSVQDMQRLQQQTFETQAQIASGRRILAPSDDPVASAKIIQVNQELSRLDQYIDNADSVE 72
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSF 128
+++++A+ + + ++ ++ +D + I E+ +L IA
Sbjct: 73 NRLNVAETQIEQVTTLLVRVRELTIQADALSVTQSDRQLIAKELDVRLEELLSIANTRDV 132
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
NGE G+ + G D G+ + P + +
Sbjct: 133 NGEYIFAGYQGAEKPFEQMNGGGFVYNGDEGQRLVQVASSTEIPISDSGKRIFMDIDAVQ 192
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
+ V + + + +
Sbjct: 193 TRVEAAGESGNSGTGVVTNSRVTNQGNYDANSYPDDYVIQFNSAGNQYDVYART------ 246
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
+ + + T ++ T+ +
Sbjct: 247 -----------------------DILDGGLNTPLFSVANSGSPITIDANTTPQAVPTNLG 283
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
++ D + ++S + + + D + E + +
Sbjct: 284 WEITLDGIPADGDLFYVNSTQKQDVLTTIAKISEGMKSLGDSAVDQSAFDDLVAETLENL 343
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
+ +IG+ + + + + K + + D D A +RLS
Sbjct: 344 SAAEINMSEVKSEIGARQNTVDSVRSLHQQIELINNKVLSEIRDLDYAEALSRLSIETFT 403
Query: 429 QQLAVQA 435
+ + Q+
Sbjct: 404 LEASQQS 410
>gi|268638418|gb|ACZ17544.1| flagellin A [Campylobacter jejuni]
Length = 580
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 78/208 (37%), Gaps = 3/208 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANSDLNAKSLDSSLARLSSGLRINSAADDASGMAIADTLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I S + + T + S
Sbjct: 125 NIANTTSFNGKQLLSGGFTNQEFQIGSSSNQTVKATIGATQSSKIGVTRFETGTQSVTSG 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDV 208
G + + +
Sbjct: 185 VVGLTIKNYNGIEDFKFQDVVISTSVGT 212
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ ++I + I + + V+ + D D
Sbjct: 484 VTTLKGAMAVMDIAETAINNLDQIRADIGSVQNQITSTINNITVTQVNVKAAESTIRDVD 543
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ASES S Q A++ N+S +L L +
Sbjct: 544 FASESANYSKANILAQSGSYAMAQANSSQQNVLRLLQ 580
>gi|146312168|ref|YP_001177242.1| flagellin domain-containing protein [Enterobacter sp. 638]
gi|145319044|gb|ABP61191.1| flagellin domain protein [Enterobacter sp. 638]
Length = 278
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 84/216 (38%), Gaps = 3/216 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++ L +L +R+SSGLR++ + D+AA +IA M S +
Sbjct: 1 MAVINTNLLSLTTQNNLSKSQSSLGTAIERLSSGLRINSSKDDAAGQAIANRMTSQIKGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQS 117
+ + G S V A+ +++ + I+ S S+ +EITQ S
Sbjct: 61 TQAARNANDGISLVQTAEGNLNEINSNLQRIRELAVQAANDTNGSTDLTSVNTEITQRLS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA G++FNG++ L + +S + + + + T+
Sbjct: 121 EIDRIAGGANFNGKSLLNGAVSTSLSIQVGAGTSANDTIKIDSTALINATSGTLSSTLST 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
S + T + + + I ++
Sbjct: 181 TISNNSTAQTVISAADAAIAKIDGARSNMGAIQNRF 216
Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 39/97 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ++S D I A +G+I +R + + + R+ DAD
Sbjct: 182 ISNNSTAQTVISAADAAIAKIDGARSNMGAIQNRFESTINNLNNSISNLSAAQSRIQDAD 241
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+E + +S Q QQ LS N +LSL R
Sbjct: 242 YATEVSNMSRAQILQQAGTSVLSQANQVPQAMLSLLR 278
>gi|269965715|ref|ZP_06179828.1| flagellin [Vibrio alginolyticus 40B]
gi|269829783|gb|EEZ84019.1| flagellin [Vibrio alginolyticus 40B]
Length = 221
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 41/101 (40%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
+T +E V+ ID +K + ++G+ +R + + + + V R
Sbjct: 120 VDTIDVTSVGGAQESVAIIDAALKYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSR 179
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ D D A E+T ++ Q Q + L+ + LSL
Sbjct: 180 IKDTDFAKETTAMTKSQILSQASSSILAQAKQAPNSALSLL 220
>gi|242238994|ref|YP_002987175.1| flagellin domain protein [Dickeya dadantii Ech703]
gi|242131051|gb|ACS85353.1| flagellin domain protein [Dickeya dadantii Ech703]
Length = 379
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/232 (19%), Positives = 79/232 (34%), Gaps = 3/232 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ A L +L +R+SSGL+++ AADNAA +I+ S L+
Sbjct: 4 VINTNSISLIAQNNLNKSKTSLSTAIERLSSGLKINSAADNAAGQAISNRFTSQINGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S G S + + + + + +I+ +D +SIQ EITQ S++
Sbjct: 64 ASSNASDGISLAQTTEGALDEINENLQSIRTLTVQAQNGTNSASDLQSIQDEITQRLSEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ + FNG L S + + + D + + + L
Sbjct: 124 DRISAQTDFNGVKVLDGSKTSVSIQVGSQDGQTITIDLQKINTTSLNLTGFNVDGPSLSG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
S ++ SG +S +
Sbjct: 184 SATDASSGTYNSTSYTGVSVTVGSTTGGSVSGSFSGVLSGATLVSDDNGNYF 235
Score = 99.4 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 47/372 (12%), Positives = 103/372 (27%), Gaps = 2/372 (0%)
Query: 82 SKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSS 141
+ + NK + + S +I A + F + T S+
Sbjct: 8 NSISLIAQNNLNKSKTSLSTAIERLSSGLKINSAADNAAGQAISNRFTSQINGLTQASSN 67
Query: 142 TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
+ + D + +I +S++D + +
Sbjct: 68 ASDGISLAQTTEGALDEINENLQSIRTLTVQAQNGTNSASDLQSIQDEITQRLSEIDRIS 127
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
D + S + + + V P+ +
Sbjct: 128 AQTDFNGVKVLDGSKTSVSIQVGSQDGQTITIDLQKINTTSLNLTGFNVDGPSLSGSATD 187
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
S + + + S T + + S + N G V
Sbjct: 188 ASSGTYNSTSYTGVSVTVGSTTGGSVSGSFSGVLSGATLVSDDNGNYFVSGTLTSAVSNV 247
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN--EKLAMEEMVSFIDTQIKCATAAA 379
+ + D T +T ++ + + A + ++ +D I +
Sbjct: 248 GASGTTAYYKLTSNDLSVDSTTGTLTISIDSVSTDDLTLAATSDPLTTLDKAIAQVDSMK 307
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G+I +R + + + + R+ DAD A+E + +S Q QQ L+
Sbjct: 308 SNLGAIQNRFDSTINNLTSTTTNLSEAQSRIQDADYATEVSNMSKAQILQQAGTSVLAQA 367
Query: 440 NNSTARILSLFR 451
N+ +LSL +
Sbjct: 368 NSVPQTVLSLLQ 379
>gi|167571912|ref|ZP_02364786.1| flagellin D [Burkholderia oklahomensis C6786]
Length = 311
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 4/164 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN ++M L + NL R+ +G R++ AAD+AA IA +++ + +
Sbjct: 12 MLSLHTNIASMRIQGALANSQANLTTSMTRLGTGYRINSAADDAAGLQIATRLRAQHRGM 71
Query: 61 SAVSD-AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQ 116
D S + A+ ++ +++ +K+ T + D ++Q E L
Sbjct: 72 EVARDKNASNAKSMLQTAEGAFAEVENIVQRMKDLATQAADSSYTQPDRDAMQKEYDALG 131
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
++L +I +S+ GE GS K + N
Sbjct: 132 NELINIIGNTSYGGEKLFAQANGSGGVGAGKLTKEMKFQIGNTA 175
Score = 92.1 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/234 (11%), Positives = 54/234 (23%)
Query: 218 STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASA 277
+ K + A Q + + +
Sbjct: 78 NASNAKSMLQTAEGAFAEVENIVQRMKDLATQAADSSYTQPDRDAMQKEYDALGNELINI 137
Query: 278 TYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
+ + T ++GNT V T + D
Sbjct: 138 IGNTSYGGEKLFAQANGSGGVGAGKLTKEMKFQIGNTAGEVMTLDVSKALEAVTKAFDDI 197
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
M+ + + +IG+ +R+ +
Sbjct: 198 SAVFKAGASGVSGGGKDIAAAKDANAMLDKLSAALDSVGGIRAEIGAGQNRLDHVRANLA 257
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
M + G + D D ASE+ + L QQ L + + +LSL +
Sbjct: 258 NMSSNTKDAEGSIRDVDYASEAANQAKLTILQQAGGSMLKQASQMSQLVLSLLQ 311
>gi|328543145|ref|YP_004303254.1| Bacterial flagellin N-terminus domain protein [polymorphum gilvum
SL003B-26A1]
gi|326412891|gb|ADZ69954.1| Bacterial flagellin N-terminus domain protein [Polymorphum gilvum
SL003B-26A1]
Length = 507
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 76/504 (15%), Positives = 148/504 (29%), Gaps = 56/504 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I + + L+ + VQ+R+++GL+V+ A DN + A + + LS
Sbjct: 4 NITLSAAVRQNLLTLQTTADMMSGVQNRLATGLKVNSALDNPNSFFTASGLNNRANDLST 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQLR 120
+ D +G + A G+ ++ T K K + + K + L Q+
Sbjct: 64 LLDDMGQVIQTMKAADEGIQSITKLVETAKAKANQALQTQSQYERKRYTEQYNDLLKQIE 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV------------------- 161
+A+ SS+ G+N L TA + +
Sbjct: 124 SVAKDSSYKGKNLLAGTGNDLTAIFNEDNTSKLTINAVDYTETNLSQGLNLSRLLEGKGG 183
Query: 162 --------------------------------QITTIDYYLDPETVLLDSSTDGTERYGL 189
+ + T T +
Sbjct: 184 ATSFQLEGGSASITLLNATSDALSSGSLLSDATGIEVGDVIQLRTAASGGGAGVTGFTNI 243
Query: 190 LDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIP 249
+ + + V + + A
Sbjct: 244 TVGANTKVQDLVDQINGVAGVKAEFDEKTGALKITSNDDVYLHNTNAGAATPAPADMVSV 303
Query: 250 VPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
A A T S + + S TT +T N A
Sbjct: 304 TSSNFAAANQLLTGSGSYAVGDILTLEDGNGYELGSLEITDKTTVKDLTDFINDFNGVKA 363
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN---EKLAMEEMVS 366
+ ES + + + + N + + +++
Sbjct: 364 SFSTVTGKITIESDVTLNLMSTNASNFNATGFTADSDGVNVNAMQESGFATDNEINKVID 423
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
++ + A A + G+ S + +++++ K M + +++G G+L AD E L ALQ
Sbjct: 424 RLNNALSNLRAQASEFGTNLSTVEIRQNYTKKMINTLQEGAGKLTLADTNQEGANLLALQ 483
Query: 427 TQQQLAVQALSIVNNSTARILSLF 450
T+QQLA +LS + + +LSLF
Sbjct: 484 TRQQLASTSLSFASQADQTVLSLF 507
>gi|254230131|ref|ZP_04923526.1| flagellin [Vibrio sp. Ex25]
gi|151937324|gb|EDN56187.1| flagellin [Vibrio sp. Ex25]
Length = 294
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 42/101 (41%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
+T +E V+ ID +K + ++G+ +R + + + + V R
Sbjct: 193 VDTIDVTSVGGAQESVAIIDAALKYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSR 252
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ D D A E+T+++ Q Q + L+ + LSL
Sbjct: 253 IKDTDFAKETTQMTKSQILSQASSSILAQAKQAPNSALSLL 293
Score = 46.3 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 25/285 (8%), Positives = 74/285 (25%), Gaps = 3/285 (1%)
Query: 83 KAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
+ +++ +++ + +IQ E+T L +L IA +SF G L G
Sbjct: 1 ETTNILQRMRDLSLQSANGSNSKSERVAIQEEVTALNDELNRIAETTSFGGNKLLNGTHG 60
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + I + + + + + + + +
Sbjct: 61 AKSFQIGADNGEAVMLELKDMRSDNKMMGGVSYQAESGKGKDWNVAEGKNDLKINLTDSY 120
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
Q + + T + G + + +
Sbjct: 121 GQEQEINISAKAGDDIEELATYINGQTDLVKASVDQDGKLQIFAGNNKVEGEVEFSGGLS 180
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
G K T + + + + S + + + +D
Sbjct: 181 GELGLGEGKKVTVDTIDVTSVGGAQESVAIIDAALKYVDSHRAELGAFQNRFNHAISNLD 240
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
+ +++ K K+ D + ++ + + + ++
Sbjct: 241 NINENVNASKSRIKDTDFAKETTQMTKSQILSQASSSILAQAKQA 285
>gi|291562067|emb|CBL40883.1| Flagellin and related hook-associated proteins [butyrate-producing
bacterium SS3/4]
Length = 276
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 92/268 (34%), Gaps = 3/268 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N +A+++ + L L +++SSG +++ A D+AA +I++ M+S L+
Sbjct: 2 VIQHNIAAINSYRNLGTNQSALSKNLEKLSSGYKINRAGDDAAGLAISETMRSQINGLNQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
+ + A+ M++ ++ +K T +I++EI L ++
Sbjct: 62 AVNNANDAIGLIQTAEGAMTETHSMLQRMKTLSTQAANGTYTKTARDNIKAEIDALNKEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FNGE L D + ++ + S + V T+ +
Sbjct: 122 TRIATTTEFNGEKPLSPDTKTKGKNLTFFIGASADASNAMTVAQMTMTAVALTIDRIAVD 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+T + KV + K TS
Sbjct: 182 NTTNAFKAMKSIDAAIEKVSTYRATLGAAQNRLEHTVNNLKVTSENITSAESRIRDTDMA 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSG 267
D+ + L AA + + ++
Sbjct: 242 DEITAYTKNNILLQAAQSMLSQSNAMPQ 269
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 32/234 (13%), Positives = 63/234 (26%)
Query: 218 STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASA 277
+ T A + I I A + + + +
Sbjct: 43 AAGLAISETMRSQINGLNQAVNNANDAIGLIQTAEGAMTETHSMLQRMKTLSTQAANGTY 102
Query: 278 TYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
T N + A K + + T +
Sbjct: 103 TKTARDNIKAEIDALNKEITRIATTTEFNGEKPLSPDTKTKGKNLTFFIGASADASNAMT 162
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
M + + A + + + ID I+ + +G+ +R+ + +K
Sbjct: 163 VAQMTMTAVALTIDRIAVDNTTNAFKAMKSIDAAIEKVSTYRATLGAAQNRLEHTVNNLK 222
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + R+ D DMA E T + Q A LS N +LS+ +
Sbjct: 223 VTSENITSAESRIRDTDMADEITAYTKNNILLQAAQSMLSQSNAMPQGVLSMLQ 276
>gi|332994153|gb|AEF04208.1| flagellin-like protein [Alteromonas sp. SN2]
Length = 283
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN S+++A ++L D++ +L +R+SSG R++ AAD+AA I M S L+
Sbjct: 5 VNTNVSSLNAQRQLFDVSNSLGTSFERLSSGFRINSAADDAAGLQITDRMTSQVQGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
S A+ +S+ + I+ D ++Q E++ L++++
Sbjct: 65 VRNANDAISLSQTAEGALSETTTSLQRIRTLAIQSQNGINSSADRVALQKEVSALRTEIS 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
I+ + F G N L D + A
Sbjct: 125 RISTTTQFAGVNILSGDFSAKFLVGAN 151
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 37/101 (36%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
T+ M++ +D I +G++ +R + + + V +
Sbjct: 182 GGTNNVLTSENASSMLASVDNAISAVGGLRADLGALQNRFQSTIRNLSNISENVSAARSQ 241
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ D D A+E+ L+ Q QQ + LS N L L
Sbjct: 242 IKDTDFATETANLTRNQILQQASTTVLSQANQRPQAALQLL 282
>gi|6691457|dbj|BAA89302.1| flagellin [Leptospira sp. 1342 K]
Length = 248
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 27/236 (11%), Positives = 70/236 (29%), Gaps = 3/236 (1%)
Query: 23 NLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82
+E +SSG+R++ AAD+A+ ++++ +++ L G S + A+ +
Sbjct: 3 AVEKTMKALSSGMRINSAADDASGLAVSEKLRTQINGLRQAERNTEDGMSFIQTAEGFLE 62
Query: 83 KAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
+ +++ I+ D + +Q E++ L ++ IA + FN
Sbjct: 63 QTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVDRIASQAEFNKFKLFEGQFA 122
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + ++ + I T+ + D
Sbjct: 123 RGSRVASMWFHMGPNQNQRERFYIGTMTSKALKLVKADGRPIAISSPGEANDVIGLADAA 182
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + + L + + D + +
Sbjct: 183 LTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDADMAEEVVSLTTKQI 238
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 30/83 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ D + +G+ +R+ + + ++ R+ DAD
Sbjct: 166 ISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDAD 225
Query: 415 MASESTRLSALQTQQQLAVQALS 437
MA E L+ Q Q L+
Sbjct: 226 MAEEVVSLTTKQILVQSGTAMLA 248
>gi|15214030|sp|Q9KWW9|FLAB3_TREMA RecName: Full=Flagellar filament 30.7 kDa core protein; AltName:
Full=Flagellin subunit protein B3
gi|6723982|emb|CAB67250.1| flagellin subunit protein B3 [Treponema maltophilum]
Length = 285
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 70/182 (38%), Gaps = 3/182 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N S+M A++ L N ++ +++SSG R++ A D+A+ ++++ M+ L+
Sbjct: 3 INHNMSSMYANRMLGINNDQVQGNIEKLSSGQRINRAGDDASGLAVSEKMRMQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
I G S + + + + D++ I+ D IQ E++QL ++
Sbjct: 63 QKNIQNGVSFIQATEGYLQETTDILGRIRELSIQSANGIYSDEDRMQIQVEVSQLIDEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG N L +++ S D V
Sbjct: 123 RIASSAQFNGMNMLTGAFAANSVSGRIMQFHIGANVDQNARVYIGTMTAQSLGLVGTQGD 182
Query: 181 TD 182
Sbjct: 183 AF 184
Score = 89.8 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 36/96 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ +D+ + +G+ +R + I + + ++ + D D
Sbjct: 189 IASPESANMAIATLDSALTSVNKQRADLGAYQNRFEMAAKGIGIASENLQAAESIIRDTD 248
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MASE + Q Q +V L+ N +L L
Sbjct: 249 MASEIVDYTKNQILTQSSVAMLAQANTQAQNVLPLL 284
>gi|87242510|gb|ABD33794.1| flagellin [Bacillus weihenstephanensis]
Length = 257
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 3/128 (2%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ +R + +R+SSG R++ AAD+AA +IA M++ L S G S
Sbjct: 1 QEYMRQNQDKMNTSMNRLSSGKRINSAADDAAGLAIATRMRAKENGLGVASRNTQDGISL 60
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNG 130
+ A + ++ + + +++ D K+ E QL +Q+ IA+ ++FNG
Sbjct: 61 IRTADSALNSVSNTLLRMRDLAVQSANGTNSVDDQKATNKEFGQLINQIDYIAKNTAFNG 120
Query: 131 ENWLRTDL 138
L
Sbjct: 121 TTLLNGAT 128
Score = 68.2 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 34/74 (45%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+++ +D ++K + +G+ +R+ + ++ ++ DADMA E + ++
Sbjct: 184 IITKLDDKLKEIATSRADLGATLNRLDFNVANLNSQASSMASSASQIEDADMAKEMSEMT 243
Query: 424 ALQTQQQLAVQALS 437
+ + + LS
Sbjct: 244 KFKILNEAGISMLS 257
>gi|46580487|ref|YP_011295.1| flagellin [Desulfovibrio vulgaris str. Hildenborough]
gi|120602194|ref|YP_966594.1| flagellin domain-containing protein [Desulfovibrio vulgaris DP4]
gi|46449906|gb|AAS96555.1| flagellin, putative [Desulfovibrio vulgaris str. Hildenborough]
gi|120562423|gb|ABM28167.1| flagellin domain protein [Desulfovibrio vulgaris DP4]
gi|311234228|gb|ADP87082.1| flagellin domain protein [Desulfovibrio vulgaris RCH1]
Length = 297
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 79/204 (38%), Gaps = 3/204 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N A +AS+ L D L R+SSGLRV +AAD+AA ++ ++M++D ALS
Sbjct: 3 LVINHNLMAQNASRNLGDSYTKLSTSVRRLSSGLRVGNAADDAAGLAVRELMRADIAALS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K I SE + S+
Sbjct: 63 QGVRNANDAISMIQTADGALGVIDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA+ + FNG L +L T S + ++ G ++ DYY
Sbjct: 123 ITRIAKMTDFNGVYLLNGNLSGDTHSGSGLQSTGKMKVHFGTANDSSEDYYYVQINAATS 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQV 202
S+ G + + I +
Sbjct: 183 SALGVGTEAGSTAKAYSISTQSAA 206
Score = 97.1 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 49/140 (35%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ ++ D S V A + + + A + + + I
Sbjct: 158 MKVHFGTANDSSEDYYYVQINAATSSALGVGTEAGSTAKAYSISTQSAAQAALEGLTNAI 217
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+G++ +R+ +++ + ++ R+ D D++ E T Q Q A
Sbjct: 218 VSKDKIRASLGALQNRLENTISNLQIQAENLQAAESRISDVDVSMEMTEFVRQQILSQSA 277
Query: 433 VQALSIVNNSTARILSLFRG 452
V LS N+ L+L G
Sbjct: 278 VAMLSQANSLPRLALNLLGG 297
>gi|48716100|dbj|BAD22838.1| flagellin [Campylobacter lari]
Length = 563
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 75/198 (37%), Gaps = 3/198 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNVASLNAQNNANLNSRALDTSLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 64 INNGNDALGILQTADKAMDEQLKILDTIKVKATQAAQDGQSTKTRNMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I + + ++ S
Sbjct: 124 NIANTTSFNGKQLLSGGFTNQSFQIGAQSNQTIQASIGATQSSKIGVTRFETGSMSHSSG 183
Query: 181 TDGTERYGLLDRNHKIKV 198
+
Sbjct: 184 VAQLTIKNYNGIDDFKFQ 201
Score = 95.6 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 24/213 (11%), Positives = 68/213 (31%)
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
A I+ + L + +T + + + N ++ ++ +
Sbjct: 351 MGAADMISQASISLRESKGNIDTNVADAMGFNAYKGGGKMIVTFANITAFMSENGMSAGS 410
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ ++KV + T + + + ++ + ++I
Sbjct: 411 GFSVNSGKDMSKVYEGNLAFVTAFSVAFGFSVGNNDGATQFANLAVSIAAKDQQAGVTTL 470
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
++ +T I +G++ ++I + I + + ++ + D D A+E
Sbjct: 471 KGAMAVMDIAETAITNLDQIRADLGAVQNQITATLNNISVTQVNIKSAESNIRDVDFAAE 530
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
S + Q A+S N ++ L +
Sbjct: 531 SANFAKFNILAQSGSYAMSQANAVQQNVMRLLQ 563
>gi|323700871|ref|ZP_08112783.1| flagellin domain protein [Desulfovibrio sp. ND132]
gi|323460803|gb|EGB16668.1| flagellin domain protein [Desulfovibrio desulfuricans ND132]
Length = 295
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 70/181 (38%), Gaps = 3/181 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N AM+A++ L NLE R+SSGLR++ +AD+AA ++ ++M++D +L
Sbjct: 3 LVINHNLMAMNAARNLGVSYGNLETSTRRLSSGLRITQSADDAAGLAVRELMRADISSLQ 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K I SE + S+
Sbjct: 63 QGIRNANDAISLIQTADGALGVIDEKLIRMKELAMQASTGTYNSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG L L +T + ++ G DYY
Sbjct: 123 ITRIANSTDFNGIYLLNGALSGATHDGSGLKATGKLKVHFGTGNDCAEDYYYIQIGTATA 182
Query: 179 S 179
S
Sbjct: 183 S 183
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 46/123 (37%)
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+ + ++ + + + ++ + ++ I +GS+ +
Sbjct: 172 YYYIQIGTATASALGVGLGATGTAGRSISTQQLAQQALDVLNNAIISKDKIRANLGSLQN 231
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
R+ +++ + V+ R+ D D+A+E T Q Q AV L+ N+ L
Sbjct: 232 RLENTVTVLEIQAENVQAAESRISDVDVATEMTEFVRNQILTQSAVSMLAQANSMPRMAL 291
Query: 448 SLF 450
SL
Sbjct: 292 SLL 294
>gi|290792684|gb|ADD63784.1| flagellin [Borrelia hermsii]
gi|290792692|gb|ADD63788.1| flagellin [Borrelia hermsii]
Length = 331
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNSINATNLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSAAQNVKTAE 149
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 18/161 (11%), Positives = 48/161 (29%)
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
T + + ++ + N E + +
Sbjct: 171 WTLRVHVGANQDEAIAVNIYASNVANLFAGEGAPAQEIGQQEEGQAAPAPAAAPAQGGVN 230
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ + +G+ +R+ + + + ++ ++
Sbjct: 231 SPINVTTAVDANMSLAKIEGAIRMVSDQRANLGAFQNRLESIKGSTEYAIENLKASYAQI 290
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DA M E + Q A+ ++ N +LSL R
Sbjct: 291 KDATMTDEVVASTTHSILTQSAMAMIAQANQVPQYVLSLLR 331
>gi|254457766|ref|ZP_05071194.1| minor flagellin subunit FlaB [Campylobacterales bacterium GD 1]
gi|207086558|gb|EDZ63842.1| minor flagellin subunit FlaB [Campylobacterales bacterium GD 1]
Length = 278
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 72/201 (35%), Gaps = 3/201 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN AM+A + N L+ + +SSGLR++ AAD++A +IA + + + L
Sbjct: 5 INTNIGAMNAHRNATMNNVGLDKSLNALSSGLRINKAADDSAGLAIANKLSAQSQGLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
G + A + + +++ + D IQ E+T L + +
Sbjct: 65 IRNSNDGIGLIQTADGALEEYGNILKRVSVLAVQAANDTQDTTSRGYIQQEVTALMEEAQ 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
DIA + FNG N L G++ A + S S+
Sbjct: 125 DIATTTKFNGVNLLDATGGTAGAFTFHTGAYSTETQTVTIGDAQVSTLVGTTAATFTVST 184
Query: 181 TDGTERYGLLDRNHKIKVEPQ 201
E V+ +
Sbjct: 185 RADAETTIAAIGTAITNVDGK 205
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 48/138 (34%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T + + + + G + V+ + A T + + E ++ I T I
Sbjct: 141 TGGTAGAFTFHTGAYSTETQTVTIGDAQVSTLVGTTAATFTVSTRADAETTIAAIGTAIT 200
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +++ I + V+ ++ D D A+ES + Q
Sbjct: 201 NVDGKRATLGAAQNKLESTIRNISVTEVNVKSAESQIRDVDFAAESATFAKHNILAQSGS 260
Query: 434 QALSIVNNSTARILSLFR 451
A+S N +L L +
Sbjct: 261 YAMSQANAVQQNVLKLLQ 278
>gi|94266999|ref|ZP_01290645.1| Flagellin-like:transferase hexapeptide repeat [delta proteobacterium
MLMS-1]
gi|93452294|gb|EAT02933.1| Flagellin-like:transferase hexapeptide repeat [delta proteobacterium
MLMS-1]
Length = 1493
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 41/98 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ++ D +K + +GS +++ I + R + + D D
Sbjct: 1396 VTSQEGAQMAIAIADAALKDLNSVRADLGSTQNQLTSTISNISVTRVNISAAESAIRDVD 1455
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
A ES+ S LQ Q A++ N ++ +LSL +G
Sbjct: 1456 FAEESSNFSRLQILSQAGSFAMAQANATSQNVLSLLQG 1493
Score = 54.7 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/297 (10%), Positives = 79/297 (26%), Gaps = 3/297 (1%)
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLRDIARG 125
G S V A + ++I++++T+K K + G +IQ++I +L QL +IAR
Sbjct: 1 DGISMVQTADGALEESINIINTVKTKAIQAAQDGQTQESRGAIQADINRLLEQLDNIART 60
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
++FN + L + + + + + + +
Sbjct: 61 TAFNNQKLLSGNFTNQAFQVGAYANETVNISISSSESTKIGHVSNSTLSYNEAGTAALDI 120
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
+ + + + + A K + + + + + G
Sbjct: 121 YSSIENSTFSLATVDIAYDNSRENSLAALADEINKLSDVLGITASATVQSTTDSNITAGN 180
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
+ + + + A + + G ++D +
Sbjct: 181 TDSSFAINDVTIGQVEVQENDANGALTKAINQKTNQHGVFASVDYQGQMTLTSTDGRAID 240
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
T + +TL + D + +
Sbjct: 241 VTQGDNTTAVLGGTADLSTLGVINLNQTGAAEIVVSDRGGMNVEVTGDQISVAYNLM 297
>gi|254461808|ref|ZP_05075224.1| flagellin core protein A [Rhodobacterales bacterium HTCC2083]
gi|206678397|gb|EDZ42884.1| flagellin core protein A [Rhodobacteraceae bacterium HTCC2083]
Length = 882
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 74/235 (31%)
Query: 218 STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASA 277
+ ++ A A T + + + + TS + + A A
Sbjct: 648 TDTNAVTGASTAAAGVATATTMELSMDTTDDVSFQISDGRTNSVVRLTSFDTTDNSAMLA 707
Query: 278 TYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
+ + S TS TNS +V +++ D S
Sbjct: 708 EVQSALSQSGSNITASVTSATSAITLTNSLGGEVELSNFKSDGAGVMTASPASEQGVGKM 767
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
T + + +D I+ +G++ +R+ +
Sbjct: 768 LDDTGTGASQSAVAAIDISSSSGATSALDALDRAIETIGKERANLGAVMNRLDSTISNLT 827
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ E GR+ DAD A+EST ++ + Q + L+ N S +LSL +G
Sbjct: 828 NVSVNTEAAKGRIEDADFATESTNMTKSKILAQASTSILAQANASKQGVLSLLQG 882
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 3/145 (2%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
N +++V +R+++G RV+ A+D+AA S M S L+ + G S A+
Sbjct: 22 NRDMDVSMERLATGKRVNSASDDAAGVSTISRMNSQVRGLNQAIENASQGQSMAATAEGA 81
Query: 81 MSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
M + ++ ++ V D ++ E+ QL+ ++ + ++FNG L
Sbjct: 82 MVEVESMLQRMRELSVQSVNDTLNSNDRSNLNDEVDQLKQEIDRVVSATAFNGTALLDGS 141
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQ 162
A + + N
Sbjct: 142 GDFDLQLGANAGQTMNFKVGNLSTT 166
>gi|313200535|ref|YP_004039193.1| flagellin domain-containing protein [Methylovorus sp. MP688]
gi|312439851|gb|ADQ83957.1| flagellin domain protein [Methylovorus sp. MP688]
Length = 266
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 63/196 (32%), Gaps = 3/196 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN ++++A + L +L R+SSGLRV+ A D+AA SIA M S +
Sbjct: 3 AVINTNIASLNAQRNLSASQSSLNTSLQRLSSGLRVNSAKDDAAGMSIATRMDSQVRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S A+ + K D + ++ D ++ +E QL S+
Sbjct: 63 VAIRNANDAISFAQTAEGALGKVTDALQRMRELAVQSANATNGTGDRSNLDAEFQQLASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ + + FN + + + + + +
Sbjct: 123 ITRLGTDTKFNSIAVFGSTSMTFQVGADSGQTITVSATAASSISGNILTDTAANTALTAI 182
Query: 179 SSTDGTERYGLLDRNH 194
+ T
Sbjct: 183 DTALNTANTNRATLGA 198
Score = 97.1 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 54/139 (38%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T ++ + + DSG ++ + + A ++ IDT +
Sbjct: 128 TDTKFNSIAVFGSTSMTFQVGADSGQTITVSATAASSISGNILTDTAANTALTAIDTALN 187
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R +++ + R+VDAD A+E+ L+ Q QQ
Sbjct: 188 TANTNRATLGAVQNRFESVISALQVSVENQSAAKSRIVDADFAAETANLTRTQILQQAGT 247
Query: 434 QALSIVNNSTARILSLFRG 452
L+ N +L+L RG
Sbjct: 248 AMLAQANTVPQNVLTLLRG 266
>gi|218896694|ref|YP_002445105.1| flagellin [Bacillus cereus G9842]
gi|218541436|gb|ACK93830.1| flagellin [Bacillus cereus G9842]
Length = 283
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R++ A+D+AA +IA MK+ G L+
Sbjct: 3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINSASDDAAGLAIATRMKAREGGLNVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
G S + A + ++ +++ +++ + S+Q E QL Q+
Sbjct: 63 GRNTQDGMSLIRTADSALNSVSNILLRMRDLANQSANGTNTKGNQASLQKEFAQLTEQID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
IA+ + FN + L T
Sbjct: 123 YIAKNTQFNDQQLLGTADKKIKIQT 147
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 39/97 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ++ + ID I +G+ +R + +K ++ ++ DAD
Sbjct: 187 AADPTSAKQAIDAIDAAITTVAGQRATLGATLNRFEFNANNLKSQETSMADAASQIEDAD 246
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + ++ + + + LS N + + L +
Sbjct: 247 MAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 283
>gi|187934470|ref|YP_001885010.1| flagellar hook-associated protein 3 [Clostridium botulinum B str.
Eklund 17B]
gi|187722623|gb|ACD23844.1| flagellar hook-associated protein 3 [Clostridium botulinum B str.
Eklund 17B]
Length = 402
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 60/434 (13%), Positives = 134/434 (30%), Gaps = 51/434 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ A + + +++ + +++SSG +S +DN S M + GA
Sbjct: 3 ITTSMLASNYQSNMTKNLNHMQKLHNQLSSGKEISRPSDNPYKVSRTMQMYMEIGANKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
++ I S+ +D +++ +V + ++ + + + K+IQ EI + +++
Sbjct: 63 NENIKDISNWLDTTDTSLNQMENVFARVRELLVSAGSGAYGPDEKKAIQDEIKERVNEMG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I ++F+G +S I S D +G T T +
Sbjct: 123 QI-LNTNFDGVYIFGGTKSTSKPVIINSNGELCYADKDGNAVSKTATGVKIDLTNPITDG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + D N+ +
Sbjct: 182 GTKSIKGMEKDGNNIKMIITDTNTTPP--------------------------------- 208
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
P A SGT S+ + R T
Sbjct: 209 ---------SETPIAIDLSAIGSGTPPETEESLFKKELKGQGFTDSDIGRLTGMVPSFDA 259
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+S + + ++ +D + I S + + N+ + +
Sbjct: 260 LDQISSELNVEVSQGVLINYNKNAVDLLEGNGTNIMSTLNKIITNLDEGGDKSVITGEC- 318
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ +D IK ++G++ +R+ +D + + + + D D ++
Sbjct: 319 ----LGEVDDIIKNLLQHRAEVGAMQNRMESAQDKNESENLDMTDILSKTEDIDFTEKTI 374
Query: 421 RLSALQTQQQLAVQ 434
+ S +QT A+Q
Sbjct: 375 QYSIMQTVYMAALQ 388
>gi|307720052|ref|YP_003891192.1| flagellin domain-containing protein [Sulfurimonas autotrophica DSM
16294]
gi|306978145|gb|ADN08180.1| flagellin domain protein [Sulfurimonas autotrophica DSM 16294]
Length = 678
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 52/334 (15%), Positives = 108/334 (32%), Gaps = 3/334 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +AM+A + + N L+ +R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIAAMNAHRNSVNTNLGLDKSLNRLSSGLRINTAADDASGMTIADSLRSQAQGLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ G + A + + + ++++++ K + +IQ +I +L +
Sbjct: 65 INNANDGVAITQTADGALDEYVKIINSVRTKAIQAASDGQNTDSRGAIQKDIDRLLEEAN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG+ L + + I + + D + +
Sbjct: 125 SIANTTQFNGQKLLDGTFSNKSFHIGAYAGETVNLSVGNVQTDSVGDIKSTTGSETRAAL 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + K DI ++ S T T +A +
Sbjct: 185 DSTNLAEGASGQALKAGELKINDTDISSTINSLSPTKLTDAASVAAAITNATDLVAEGHN 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A + + + S + +DI + S+ ++
Sbjct: 245 SLTAAAAVSAGTIDSTNFLKINGVAIADTTVVANDSNGALVRAINDISDQTGVTASLNTE 304
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + D + T+
Sbjct: 305 NKLVLESNDGSNISIATRDNDVDTVTFTASTGGG 338
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/297 (10%), Positives = 75/297 (25%)
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
D ++ L + + + D +
Sbjct: 382 TDTADSGTLSIEQSVLQGAQTITVAEANADGAGVTTTDGTNEASTTYTGLTADNETNGSG 441
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+T G +A + + S S
Sbjct: 442 AITATINSTATAAVVIEAGQLVINGVDLAGTYGDGSTAGSARSDLQSAIKDIDGMSQSYI 501
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
A + + ++ + S G T + + ++S D
Sbjct: 502 AKDGKMELSVNNGDDLNIAGTTANSTYGLTKGVTNQSKMGSVEIYSDSAVKVGGNDPDSF 561
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + E + D+ +K +GS+ +++
Sbjct: 562 GFTSGTKNVIAQGASLESIDVTSRNSAEVGILITDSALKQLDGTRSDLGSVQNQLESTIR 621
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
I + + V ++ D D A+ES + L Q A+S N ++ L +
Sbjct: 622 NISVTQVNVTAAESQIRDVDFAAESANFAKLNILAQSGSYAMSQANAVQQNVMRLLQ 678
>gi|229011052|ref|ZP_04168246.1| Flagellin [Bacillus mycoides DSM 2048]
gi|228750224|gb|EEM00056.1| Flagellin [Bacillus mycoides DSM 2048]
Length = 312
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 3/246 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + V +R+SSG R++ AAD+AA +IA M++ L S G
Sbjct: 1 MLTQEYMRQNQDKMNVSMNRLSSGKRINSAADDAAGLAIATRMRAKENGLGVASRNTQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + A + M+ +++ +++ + +++ E + L+ Q+ I+ +
Sbjct: 61 ISMIRTADSAMNSVSNILLRMRDLAVQSANGTNTNENRGALEKEFSALRDQIDYISTNTQ 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
FNG+ L D G + V D + + +GT
Sbjct: 121 FNGKTLLNGDNGFIKIHSYDDGQATAATGSAAPVVDPGTDPGTGTDPGTTKPAINGTIDI 180
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
L + + + +GT T+ A + A + +
Sbjct: 181 KLANVTSANLEGNEKKLNQISISATNAGTAGTEDDTTAINNANDAIKAIDGMIASIAGSR 240
Query: 248 IPVPLP 253
+
Sbjct: 241 ADLGAT 246
Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 21/200 (10%), Positives = 56/200 (28%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + + + + A + T T+ K
Sbjct: 113 DYISTNTQFNGKTLLNGDNGFIKIHSYDDGQATAATGSAAPVVDPGTDPGTGTDPGTTKP 172
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ + + ++ + S+ N D + + ID
Sbjct: 173 AINGTIDIKLANVTSANLEGNEKKLNQISISATNAGTAGTEDDTTAINNANDAIKAIDGM 232
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I + +G+ +R+ + + + ++ DADM E + ++ + +
Sbjct: 233 IASIAGSRADLGATLNRLDFNVESLNNQASNMASSASQIEDADMVKEMSEMTKFKILNEA 292
Query: 432 AVQALSIVNNSTARILSLFR 451
+ LS N + + L +
Sbjct: 293 GISMLSQANQTPQMVSKLLQ 312
>gi|32474579|ref|NP_867573.1| flagellin [Rhodopirellula baltica SH 1]
gi|32445118|emb|CAD75120.1| flagellin [Rhodopirellula baltica SH 1]
Length = 685
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/378 (12%), Positives = 110/378 (29%), Gaps = 6/378 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN S++ A +L+ N +L+ R+S+GLR++ AD+ A ++ ++S+ +L
Sbjct: 1 MTRINTNVSSLVAQNRLQASNEDLQTALTRLSTGLRINSGADDPAGLIASEALRSEVTSL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS----KSIQSEITQLQ 116
S + A + + + ++++ ++ + G S + Q +I
Sbjct: 61 GRAISNTRRASQIISTADSALGQVSNLLNDVRGLVVEAANNGALSKEEIAANQLQIDSSL 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+ IA+ ++F G L L + + I D ID + ++
Sbjct: 121 EAINRIAQTTTFQGRKLLDGSLDFVSTAGTVDSIRDVNIDQANLGITGQIDVEVVVQSEA 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
++ + + + ++ F + +
Sbjct: 181 TQATVTTGGFSPAAPASVSFGSSTTADINGESIDIVGPEGFTSVAFVDDPNNSNTGVVSY 240
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
+ A P + + ++ A A +
Sbjct: 241 DDTTGVLTVTGNFTGDSANPGEADADASAVAIQNLISAEDGFSASGTAVAGTPAALPTDV 300
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
++ + + E L+ S + + A
Sbjct: 301 TADVAFQIDAIAEGSEFNNVQI--EFIDLNDATADDAATASFDEEQKILTVTFNSQAATP 358
Query: 357 EKLAMEEMVSFIDTQIKC 374
+ + ID
Sbjct: 359 TNRDYAAIATAIDAVQDD 376
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSR-IHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ S ID I T+ G++G+ + + + +E+ + DAD A
Sbjct: 591 TNDVNGAASVIDEVIDKVTSLRGRLGAFQATSLESNLVSLNETLANLEEAESSIRDADFA 650
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
ES L+ Q Q LS+ N + +LSL
Sbjct: 651 QESANLTRAQILVQSGTNVLSLANQNPQNVLSLL 684
>gi|91223199|ref|ZP_01258465.1| lateral flagellin LafA [Vibrio alginolyticus 12G01]
gi|269967112|ref|ZP_06181179.1| lateral flagellin LafA [Vibrio alginolyticus 40B]
gi|91192012|gb|EAS78275.1| lateral flagellin LafA [Vibrio alginolyticus 12G01]
gi|149789438|gb|ABR29879.1| LafA [Vibrio alginolyticus]
gi|269828249|gb|EEZ82516.1| lateral flagellin LafA [Vibrio alginolyticus 40B]
Length = 283
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 91/276 (32%), Gaps = 6/276 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN++++ + + L +R+S+G RV+ AAD+AA IA +++ +S
Sbjct: 3 LSMHTNYASLVTQNTMNTTSGLLNTAMERLSTGYRVNSAADDAAGLQIANRLEAQTRGMS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S + A+ M + +++ + + T TD S+ E TQL ++
Sbjct: 63 VAMRNAQDGISMMQTAEGAMDEMTNIVYRMNDLATQSLNGSNSATDRASLNKEFTQLTAE 122
Query: 119 LRDIARGSSFNGENWLRT---DLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
L +I + F G+N L+ G T I S + + + T T
Sbjct: 123 LNNIVDNTKFGGQNLLKGGGFGAGDVTFQIGASSAETLTVSASAGIGEITTILADAAITD 182
Query: 176 LLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
+D +T + + + + + + + A
Sbjct: 183 GIDDATKAKAALDKISGADGLVEKIGSSRADFGANINRLEHTMANLGNMVENVTASKGRI 242
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
T + + +
Sbjct: 243 MDTDFAVESSNMTKNQMLMQAGTTVLSQTNQLPSMA 278
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 42/102 (41%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
D + A + +S D ++ ++ G+ +R+ + M + V GR
Sbjct: 182 DGIDDATKAKAALDKISGADGLVEKIGSSRADFGANINRLEHTMANLGNMVENVTASKGR 241
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++D D A ES+ ++ Q Q LS N + +SL R
Sbjct: 242 IMDTDFAVESSNMTKNQMLMQAGTTVLSQTNQLPSMAMSLLR 283
>gi|86356322|ref|YP_468214.1| flagellin C protein [Rhizobium etli CFN 42]
gi|86280424|gb|ABC89487.1| flagellin C protein [Rhizobium etli CFN 42]
Length = 303
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 89/196 (45%), Positives = 114/196 (58%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AM+A Q LR IN +LE Q+RVSSG RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNVAAMAALQTLRGINDSLEGTQNRVSSGYRVEKASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A + M AIDV+S IK KI A E+G D +Q EI QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYSAMDSAIDVISEIKAKIVAATEKGVDKTKVQEEIGQLQQQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ +SF+GENW+ G+ + G+ + + + +
Sbjct: 121 SIAQSASFSGENWVAGADGTKSVVSTFVRDGNGNVSVKTTDYVLDTSSTGNVLFGMTSTG 180
Query: 181 TDGTERYGLLDRNHKI 196
T T + I
Sbjct: 181 TIETTSGIIGTSYGTI 196
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 49/138 (35%), Positives = 78/138 (56%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ S + + + ++ + + ++ I+ ++
Sbjct: 165 DTSSTGNVLFGMTSTGTIETTSGIIGTSYGTIGSIYSMDISTFGSAEISMALTSIEAGLE 224
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
T AA ++GSIS+RI LQE+F+ + D+++ GVGRLVDADM ES++L+ALQTQQQLA+
Sbjct: 225 AMTKAASQLGSISTRIELQENFVGALSDSIDSGVGRLVDADMEEESSKLTALQTQQQLAI 284
Query: 434 QALSIVNNSTARILSLFR 451
Q+LSI N+S IL+LFR
Sbjct: 285 QSLSIANSSAQNILTLFR 302
>gi|251789193|ref|YP_003003914.1| flagellin domain-containing protein [Dickeya zeae Ech1591]
gi|247537814|gb|ACT06435.1| flagellin domain protein [Dickeya zeae Ech1591]
Length = 275
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/259 (19%), Positives = 86/259 (33%), Gaps = 3/259 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ A L +L+ +R+SSGL ++ A DNAA I+ M + L
Sbjct: 1 MAVINTNSMSLLAQSNLNKSQSSLQTAIERLSSGLAINSAKDNAAGAGISNDMTAQIRGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQS 117
+ S G S V A+ ++ D + I+ + SIQ+EI +
Sbjct: 61 TQASKNANDGISLVQTAEGNLNTINDNLQRIRELAVQAANDTNNSVNRDSIQTEINRRVD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +A ++FNG+ L + A + I + + T T +
Sbjct: 121 EINRVAASANFNGKALLSGGASFNIQVGAGTTTNDAITVGSSALINATTTGLGVTATGVD 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
++ + I + +S L T A A
Sbjct: 181 TAANATATVDAVDAALTAINNAKANIGATLNRFESTIDNLSNTINNLTTARSRIQDADYA 240
Query: 238 TFDQAKGIATIPVPLPAAP 256
T A I +
Sbjct: 241 TEVSNMSRAQILQQAGTSV 259
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 36/97 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ V +D + A IG+ +R D + + + R+ DAD
Sbjct: 179 VDTAANATATVDAVDAALTAINNAKANIGATLNRFESTIDNLSNTINNLTTARSRIQDAD 238
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+E + +S Q QQ L+ N +L L +
Sbjct: 239 YATEVSNMSRAQILQQAGTSVLAQANQVPQTVLKLLQ 275
>gi|6691463|dbj|BAA89305.1| flagellin [Leptospira sp.]
Length = 248
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 26/237 (10%), Positives = 69/237 (29%), Gaps = 3/237 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
++ +SSG+R++ A D+A+ ++++ +++ L G S + A+ +
Sbjct: 2 QAVDKTMKALSSGMRINSAGDDASGLAVSEKLRTQVNGLRQAERNTEDGMSFIQTAEGFL 61
Query: 82 SKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ D++ I+ D + +Q E++ L ++ IA + FN
Sbjct: 62 QQTSDIIQRIRVLAIQTANGIYSPEDRQLVQVEVSALVDEVDRIASQAEFNRFKLFEGQF 121
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ + ++ + I T+ + D
Sbjct: 122 ARGSKVASMWFHMGPNQNQRERFYIGTMTSRALKLLGADGKPVSVSTPTKSNDVIGFADA 181
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + + L + + D + +
Sbjct: 182 ALGKIMKQRADMGAYFNRLEYSAKGLMAAYENMQASESRIRDADMAEEMVALTTKQI 238
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 31/83 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ F D + +G+ +R+ + + ++ R+ DAD
Sbjct: 166 VSTPTKSNDVIGFADAALGKIMKQRADMGAYFNRLEYSAKGLMAAYENMQASESRIRDAD 225
Query: 415 MASESTRLSALQTQQQLAVQALS 437
MA E L+ Q Q L+
Sbjct: 226 MAEEMVALTTKQILVQSGTAMLA 248
>gi|4903028|dbj|BAA77939.1| flagellin [Leptospira sp. Bangkinang 1]
gi|4903056|dbj|BAA77953.1| flagellin [Leptospira sp. Paidjan]
gi|4903066|dbj|BAA77958.1| flagellin [Leptospira sp. Salinem]
gi|45597351|dbj|BAD12778.1| flagellin [Leptospira interrogans serovar Hardjo]
Length = 248
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 26/236 (11%), Positives = 70/236 (29%), Gaps = 3/236 (1%)
Query: 23 NLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82
++ +SSG+R++ AAD+A+ ++++ +++ L G S + A+ +
Sbjct: 3 AVDKTMKALSSGMRINSAADDASGLAVSEKLRTQINGLRQAERNTEDGMSFIQTAEGFLE 62
Query: 83 KAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
+ +++ I+ D + +Q E++ L ++ IA + FN
Sbjct: 63 QTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVDRIASQAEFNKFKLFEGQFA 122
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + ++ + I T+ + D
Sbjct: 123 RGSRVASMWFHMGPNQNQRERFYIGTMTSKALKLVKADGRPIAISSPGEANDVIGLADAA 182
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + + L + + D + +
Sbjct: 183 LTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDADMAEEVVSLTTKQI 238
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 30/83 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ D + +G+ +R+ + + ++ R+ DAD
Sbjct: 166 ISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDAD 225
Query: 415 MASESTRLSALQTQQQLAVQALS 437
MA E L+ Q Q L+
Sbjct: 226 MAEEVVSLTTKQILVQSGTAMLA 248
>gi|187778711|ref|ZP_02995184.1| hypothetical protein CLOSPO_02306 [Clostridium sporogenes ATCC
15579]
gi|187772336|gb|EDU36138.1| hypothetical protein CLOSPO_02306 [Clostridium sporogenes ATCC
15579]
Length = 273
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 78/211 (36%), Gaps = 3/211 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ +N S +++ KL + + +++SSG R++ AAD+A SI++ +K+ L+
Sbjct: 3 VSSNGSLLNSFAKLTKNKTSKNQLTEKLSSGKRINKAADDAGGLSISESLKAQVRGLNRA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLR 120
I G S V ++ M + + +K Q+ E L+ +
Sbjct: 63 EKNIQDGISMVQVSDGAMDEITKTLHRMKELSVQACNGTLTDDDRQAIGEEFQHLKENID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+G+ FNG L D + + + N +Q ID + S
Sbjct: 123 SIAKGTEFNGIKLLNEDKTLVIQTRENPYLTYDLTLTNNSLQALGIDSININTASNSNES 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ +++++ +
Sbjct: 183 IGKIKDALNTVIKNRVELGNHLNNLQHAFNN 213
Score = 57.1 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 28/96 (29%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
++ N E + I + ++G+ + + + + + + R+
Sbjct: 169 DSININTASNSNESIGKIKDALNTVIKNRVELGNHLNNLQHAFNNVSNSGSNLTSSLSRI 228
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
D DMA+ + L S +
Sbjct: 229 EDIDMATALMKSVRDDLLINYNKSMLVSARQSNEGV 264
>gi|13111556|gb|AAK12373.1| flagellin A [Campylobacter jejuni]
gi|13111558|gb|AAK12374.1| flagellin A [Campylobacter jejuni]
gi|13111560|gb|AAK12375.1| flagellin A [Campylobacter jejuni]
gi|13111562|gb|AAK12376.1| flagellin A [Campylobacter jejuni]
gi|13111564|gb|AAK12377.1| flagellin A [Campylobacter jejuni]
Length = 574
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 93/279 (33%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNGAALNAKANSDLNAKSLDSSLARLSSGLRINSAADDASGMAIADSLRSQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 64 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINKLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I S + + + S
Sbjct: 124 NIANTTSFNGKQLLSGGFTNQEFQIGSSSNQTVKATIGATQSSKIGVTRFETGSQSFTSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + + + I+ K + +K A
Sbjct: 184 VVGLTIKNYNGIEDFKFDNVVISTSVGTGLGALAEEINKNADKTGVRATYDVKTTGAYAI 243
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + + G + S +
Sbjct: 244 KAGTTSQDFAINGVIIGKVDYKDGDNNGSLISAINAVKD 282
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 68/206 (33%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
I A + G + + + SA + G+ + S +
Sbjct: 369 GQISAANADAMGFNSYNGGGAKQILQASSISAFMSQAGSGFSAGSGFSAGSGKGYSTILS 428
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+V V +T T + S ++ T ++ H T ++
Sbjct: 429 GSVQIVSSTASMSSTYVISEGSGFSAGSGNSQFAALKTSTVSAHEATAGVTTLKGAMAVM 488
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+T I IGSI +++ + I + + V+ ++ D D ASES S
Sbjct: 489 DIAETAITNLDQIRADIGSIQNQVTSTINNITVTQVNVKSAESQIRDVDFASESANYSKA 548
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q A++ N+S +L L +
Sbjct: 549 NILAQSGSYAMAQANSSQQNVLRLLQ 574
>gi|327541269|gb|EGF27812.1| flagellin domain protein [Rhodopirellula baltica WH47]
Length = 685
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/261 (14%), Positives = 88/261 (33%), Gaps = 4/261 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN S++ A +L+ N +L+ R+S+GLR++ AD+ A ++ ++S+ +L
Sbjct: 1 MTRINTNVSSLVAQNRLQASNEDLQTALTRLSTGLRINSGADDPAGLIASEALRSEVTSL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS----KSIQSEITQLQ 116
S + A + + + ++++ ++ + G S + Q +I
Sbjct: 61 GRAISNTRRASQIISTADSALGQVSNLLNDVRGLVVEAANNGALSKEEIAANQLQIDSSL 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+ IA+ ++F G L L + + I D ID + ++
Sbjct: 121 EAINRIAQTTTFQGRKLLDGSLDFVSTAGTVDSIRDVNIDQANLGITGQIDVEVVVQSEA 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
++ + + + ++ F + +
Sbjct: 181 TQATVTTGGFSPAAPASVSFGSSTTANINGESIDIVGPEGFTSVAFVDDPNNSNTGAVSY 240
Query: 237 ATFDQAKGIATIPVPLPAAPA 257
+ A P
Sbjct: 241 DDTTGVLTVTGNFTGDSANPG 261
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSR-IHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ S ID I T+ G++G+ + + + +E+ + DAD A
Sbjct: 591 TNDVNGAASVIDEVIDKVTSLRGRLGAFQATSLESNLVSLNETLANLEEAESSIRDADFA 650
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
ES L+ Q Q LS+ N + +LSL
Sbjct: 651 QESANLTRAQILVQSGTNVLSLANQNPQNVLSLL 684
>gi|256568112|gb|ACU87540.1| FlaB [Borrelia sp. CPB1]
Length = 335
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNAINVANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + + + V+ +K D SIQ E+ QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLDEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEVEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNHMHMLSNRSSAEHVRTAE 149
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 38/101 (37%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ T +G+ +R+ + + + ++ ++
Sbjct: 235 SPVNVTTAVDANMSLTKIEDAIRMVTDQRANLGAFQNRLESVKASTEYAIENLKASYAQI 294
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DA M E + Q A+ ++ N +LSL R
Sbjct: 295 KDATMTDEIVASTTNSILTQSAMAMIAQANQVPQYVLSLLR 335
>gi|71906423|ref|YP_284010.1| flagellin, C-terminal:flagellin, N-terminal [Dechloromonas
aromatica RCB]
gi|71846044|gb|AAZ45540.1| Flagellin, C-terminal:Flagellin, N-terminal [Dechloromonas
aromatica RCB]
Length = 273
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 84/210 (40%), Gaps = 3/210 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I TN ++++A + L +L R+SSGLRV+ A D+AA IA M + + ++
Sbjct: 3 SVINTNLASLNAQRNLTTSQKSLNTSLQRLSSGLRVNSARDDAAGLGIATNMSAQSRGMT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S A+ G++ D + ++ T + ++ E LQS+
Sbjct: 63 VATRNANDGISLAQTAEGGLATITDHLQRMRELATQAASGQYDSVNLAALDKEYQALQSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ +A ++FNG+ L +D S A + + I + T + T
Sbjct: 123 ISRVATATTFNGKQILGSDSTMSFQIGAGTASENQIAVTTVTASMATGLFTSTDITTAAG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ T L+ + + L+
Sbjct: 183 AKTVMGTLDTALNTVNSARAGLGALQSRFD 212
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/221 (14%), Positives = 72/221 (32%)
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVR 290
+ A + A A + L T + +A A + + ++
Sbjct: 53 NMSAQSRGMTVATRNANDGISLAQTAEGGLATITDHLQRMRELATQAASGQYDSVNLAAL 112
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
++ S+ + G D+ + + + ++ T
Sbjct: 113 DKEYQALQSEISRVATATTFNGKQILGSDSTMSFQIGAGTASENQIAVTTVTASMATGLF 172
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ +DT + +A +G++ SR + + E R+
Sbjct: 173 TSTDITTAAGAKTVMGTLDTALNTVNSARAGLGALQSRFDGVVTQLGAQIENTEAARSRI 232
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+D D A+E+ LS Q QQ L+ N+ +LSL +
Sbjct: 233 MDTDYAAETANLSRSQILQQAGTAMLAQANSIPQNVLSLLK 273
>gi|229109216|ref|ZP_04238815.1| Flagellin [Bacillus cereus Rock1-15]
gi|228674226|gb|EEL29471.1| Flagellin [Bacillus cereus Rock1-15]
Length = 355
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 59/138 (42%), Gaps = 3/138 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R+++A+D+AA +IA M++ L ++ G
Sbjct: 1 MRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + A + M+ +++ +++ + ++ E L+ Q+ I+ +
Sbjct: 61 ISLIRTADSAMNSVSNILLRMRDLANQSANGTNTNENQAALNKEFDALKEQIDYISTNTE 120
Query: 128 FNGENWLRTDLGSSTASI 145
FN + L +
Sbjct: 121 FNDKKLLDGSNKTIAVQT 138
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 51/150 (34%)
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
V + E+ D K + + + + K
Sbjct: 206 MKEFDKVKPFMSADDVKKIETKLEDYNKANDAGAQTAAQALGKEFATLTKLETTDLKANA 265
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ IDT +K + +G+ +R+ + +K ++ ++ DADMA E +
Sbjct: 266 SGAIASIDTALKNIASNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSE 325
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + + + LS N + + L +
Sbjct: 326 MTKFKILNEAGISMLSQANQTPQMVSKLLQ 355
>gi|13111566|gb|AAK12378.1| flagellin A [Campylobacter jejuni]
gi|13111568|gb|AAK12379.1| flagellin A [Campylobacter jejuni]
gi|13111570|gb|AAK12380.1| flagellin A [Campylobacter jejuni]
Length = 576
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 93/279 (33%), Gaps = 3/279 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNGAALNAKANSDLNAKSLDSSLARLSSGLRINSAADDASGMAIADSLRSQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 64 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINKLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I S + + + S
Sbjct: 124 NIANTTSFNGKQLLSGGFTNQEFQIGSSSNQTVKATIGATQSSKIGVTRFETGSQSFTSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + + + I+ K + +K A
Sbjct: 184 VVGLTIKNYNGIEDFKFDNVVISTSVGTGLGALAEEINKNADKTGVRATYDVKTTGAYAI 243
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+A + + G + S +
Sbjct: 244 KAGTTSQDFAINGVIIGKVDYKDGDNNGSLISAINAVKD 282
Score = 95.6 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 50/138 (36%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T T + S + ++ T ++ H T ++ +T I
Sbjct: 439 TASMSSTYVISAGSGFSVGSGNSQFAALKTSTVSAHEATAGVTTLKGAMAVMDIAETAIT 498
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
IGSI +++ + I + + V+ ++ D D ASES S Q
Sbjct: 499 NLDQIRADIGSIQNQVTSTINNITVTQVNVKSAESQIRDVDFASESANYSKANILAQSGS 558
Query: 434 QALSIVNNSTARILSLFR 451
A++ N+S +L L +
Sbjct: 559 YAMAQANSSQQNVLRLLQ 576
>gi|7443283|pir||S69767 flagellin fleC, 39.6K - Yersinia enterocolitica
Length = 378
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/291 (13%), Positives = 85/291 (29%), Gaps = 5/291 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+
Sbjct: 1 MAVINTNSLSLLTQ-NLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNING- 58
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
+ + G S A+ + + + + +++ D SIQSE+ Q
Sbjct: 59 TVAARNANDGISLSQTAEGALGEINNNLQRVRDLTVQAQNSSNSASDIDSIQSEVNQRME 118
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + + + FNG L + ++ + + + + +
Sbjct: 119 EINRVTKQTDFNGIKVLDNRTATDSSYDFQVGSKDNEQISIAIGASSGWNLAAAGAGGIS 178
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + + D+ V ++ A
Sbjct: 179 GDTINTYKFTTTTALKTAQDNVKTATDDVPVKQKAYEDAVAADPADAERALKTAWDTAKT 238
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
G+ + A + + + G +
Sbjct: 239 LVTTNTGLYNTALKTATATGEAVNGNARTVAAEGFDVLKGQVAADGTAAGT 289
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 29/202 (14%), Positives = 59/202 (29%)
Query: 250 VPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ TT+ + +V + + + + T A
Sbjct: 177 ISGDTINTYKFTTTTALKTAQDNVKTATDDVPVKQKAYEDAVAADPADAERALKTAWDTA 236
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
K T + + + ++ A + A ++ ID
Sbjct: 237 KTLVTTNTGLYNTALKTATATGEAVNGNARTVAAEGFDVLKGQVAADGTAAGTTPLADID 296
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+K +G+ +R + + + R+ DAD + E + +S Q Q
Sbjct: 297 KALKAVDTQRTGLGASQNRFESTITNLNTTGNNLTSARSRIQDADYSIEVSNMSRAQILQ 356
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q + L+ N +LSL R
Sbjct: 357 QAGISVLAQANQVPQIVLSLLR 378
>gi|332139406|ref|YP_004425146.1| Flagellin [Pantoea ananatis LMG 20103]
gi|326698719|gb|AEA04443.1| Flagellin [Pantoea ananatis LMG 20103]
Length = 319
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/214 (18%), Positives = 73/214 (34%), Gaps = 12/214 (5%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRV---------SDAADNAAYWSIAQ 51
M I TN ++ L +L +R+SSGLR+ + A D+AA +IA
Sbjct: 1 MAVINTNTLSLVTQNNLSKSQSSLGTAIERLSSGLRIERLSSGLRINSAKDDAAGEAIAN 60
Query: 52 IMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSI 108
S+ L+ + G S A+ +++ + + +++ D SI
Sbjct: 61 RFTSNINGLTVAARNANDGISLSQTAEGALTEVNNNLQRVRDLTVQAQNSSNSASDIDSI 120
Query: 109 QSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
Q+E+ Q ++ + + + FNG L T GSST +
Sbjct: 121 QAEVNQRMQEIDRVTKQTDFNGIKVLNTGSGSSTYNFQVGAKDGETIGITISASDGFDLA 180
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
++ T + + V
Sbjct: 181 SAGQTGTTQNTRAMTTGDTVNGNARTTSAIGFDV 214
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 76/257 (29%)
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ + + + + + + ++ + A+ + A
Sbjct: 63 TSNINGLTVAARNANDGISLSQTAEGALTEVNNNLQRVRDLTVQAQNSSNSASDIDSIQA 122
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
++ G+S + K+ T + S + +
Sbjct: 123 EVNQRMQEIDRVTKQTDFNGIKVLNTGSGSSTYNFQVGAKDGETIGITISASDGFDLASA 182
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
T++T + D S + ++ + A T A ++ ID IK
Sbjct: 183 GQTGTTQNTRAMTTGDTVNGNARTTSAIGFDVLKGAVTGGTGGAAAGTTPLADIDKAIKA 242
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G+ +R + + R+ DAD A+E + +S Q QQ
Sbjct: 243 VDNQRSLLGASQNRFESTISNLNNTVTNLTAARSRIQDADYATEVSNMSRAQILQQAGSS 302
Query: 435 ALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 303 VLAQANQVPQTMLSLLR 319
>gi|117923382|ref|YP_863999.1| flagellin domain-containing protein [Magnetococcus sp. MC-1]
gi|117607138|gb|ABK42593.1| flagellin domain protein [Magnetococcus sp. MC-1]
Length = 271
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 72/179 (40%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN S+++A +KL + L +R+SSG R++ AAD+AA +++ M + L+
Sbjct: 5 VNTNVSSLNAQRKLNNSTNALSKTYERLSSGFRINSAADDAAGLTVSTRMTAQIRGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S V +++ +++ + ++ TD + E+TQL S++
Sbjct: 65 ARNANDGISLVQVSEGALAETEAALQRMRELAVQAASGTYTNTDRSDLNDELTQLVSEIT 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FNG L A + I + L +
Sbjct: 125 RIATETKFNGMVTLSATQTFDIQVGADAGQKITINTTAAGASALGVTAASITSAGLASA 183
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 36/96 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ ID I + +G+ +R+ + + + + R++DAD
Sbjct: 175 ITSAGLASAAITKIDAAIASVSDMRSVLGAQQNRLEAAIANLTNVSERTQAARSRIMDAD 234
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+A E+ L+ QQ L+ N LSL
Sbjct: 235 IAQETAALTRNAILQQAGTAILAQANQQPQLALSLL 270
>gi|170755677|ref|YP_001782310.1| flagellin [Clostridium botulinum B1 str. Okra]
gi|169120889|gb|ACA44725.1| flagellin [Clostridium botulinum B1 str. Okra]
Length = 273
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 79/211 (37%), Gaps = 3/211 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ +N S +++ KL + + +++SSG R++ AAD+A SI++ +K+ L+
Sbjct: 3 VSSNGSLLNSFAKLTKNKTSKNQLTEKLSSGKRINKAADDAGGLSISESLKAQVRGLNRA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLR 120
I G S V ++ M + + +K Q+ E QL+ +
Sbjct: 63 EKNIQDGISMVQVSDGAMDEITKTLHRMKELSVQSSNGTLTDDDRQAIGEEFEQLKENID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+G+ FNG L D + + + N +Q ID + S
Sbjct: 123 SIAKGTEFNGIKLLNEDKTLVIQTRENPYLSYDLTLTNNSLQALGIDSININTASNSNES 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ +++++ +
Sbjct: 183 IGKIKDALNTVIKNRVELGNHLNNLQHAFNN 213
Score = 57.4 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 27/96 (28%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
++ N E + I + ++G+ + + + + + R+
Sbjct: 169 DSININTASNSNESIGKIKDALNTVIKNRVELGNHLNNLQHAFNNASNSGSNLTSSLSRI 228
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
D DMA+ + L S +
Sbjct: 229 EDIDMATAIMKSVRDDVLINYNKSMLVSARQSNEGV 264
>gi|116250492|ref|YP_766330.1| flagellin A [Rhizobium leguminosarum bv. viciae 3841]
gi|115255140|emb|CAK06214.1| flagellin, major subunit of flagellum [Rhizobium leguminosarum bv.
viciae 3841]
gi|262283894|gb|ACY40756.1| FlaC [Rhizobium leguminosarum bv. viciae]
Length = 303
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 86/146 (58%), Positives = 105/146 (71%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AM+A Q LR IN +LE Q+RVSSG RV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNVAAMAALQTLRGINDSLEDTQNRVSSGYRVEKAADNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A + M AIDV+S IK KI A E+G D +Q EI QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYSAMDSAIDVISEIKAKIVAATEKGVDKAKVQEEIGQLQQQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA+ +SF+GENW+ G+ + +
Sbjct: 121 SIAQSASFSGENWVAGADGTKSVVSS 146
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 50/138 (36%), Positives = 78/138 (56%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+DS + + + ++ + + ++ I+ ++
Sbjct: 165 DTSSAGNVLFGMDSTGAIETSSGLIGTSSGTIGSIYSMDITNFDSPEISMALTSIEAGLE 224
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
T AA ++GSIS+RI LQE F+ + D+++ GVGRLVDA+M ES++LSALQTQQQLA+
Sbjct: 225 AMTKAASQLGSISTRIELQEGFVSALSDSIDSGVGRLVDANMEEESSKLSALQTQQQLAI 284
Query: 434 QALSIVNNSTARILSLFR 451
Q+LSI N+S IL+LFR
Sbjct: 285 QSLSIANSSAQNILTLFR 302
>gi|241203116|ref|YP_002974212.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240857006|gb|ACS54673.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 303
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 86/146 (58%), Positives = 105/146 (71%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AM+A Q LR IN +LE Q+RVSSG RV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNVAAMAALQTLRGINDSLEDTQNRVSSGYRVEKAADNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A + M AIDV+S IK KI A E+G D +Q EI QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYSAMDSAIDVISEIKAKIVAATEKGVDKAKVQEEIGQLQQQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA+ +SF+GENW+ G+ + +
Sbjct: 121 SIAQSASFSGENWVAGADGTKSVVSS 146
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 50/138 (36%), Positives = 78/138 (56%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+DS + + + ++ + + ++ I+ ++
Sbjct: 165 DTSSTGNVLFGMDSTGAIETSSGLIGTSSGTIGSIYSMDITNFDSPEISMALTSIEAGLE 224
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
T AA ++GSIS+RI LQE F+ + D+++ GVGRLVDA+M ES++LSALQTQQQLA+
Sbjct: 225 AMTKAASQLGSISTRIELQEGFVSALSDSIDSGVGRLVDANMEEESSKLSALQTQQQLAI 284
Query: 434 QALSIVNNSTARILSLFR 451
Q+LSI N+S IL+LFR
Sbjct: 285 QSLSIANSSAQNILTLFR 302
>gi|149911693|ref|ZP_01900301.1| flagellin [Moritella sp. PE36]
gi|149805223|gb|EDM65240.1| flagellin [Moritella sp. PE36]
Length = 275
Score = 108 bits (268), Expect = 3e-21, Method: Composition-based stats.
Identities = 34/263 (12%), Positives = 87/263 (33%), Gaps = 3/263 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +++++ + L L+ +R+SSG R++ AAD+AA I +++ L+
Sbjct: 5 VNTNIASLNSQRNLTTATNALQTSFERLSSGKRINSAADDAAGLQIGSRLEAQVNGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S A+ + ++ +++ ++ D ++ +E +LQ ++
Sbjct: 65 ARNANDGISLAQTAEGALDESTNLLQRMRVLSIQSANGSNSAADRTALDTEFKELQIEIN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ ++F G + L + A + ++ + + +
Sbjct: 125 RISDDTTFGGMSLLDSSFDQDFQIGADANQIINVKISLDMDATGLGVGSATNNLLTMAQA 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
K S + T ++ + + A +
Sbjct: 185 QIAIVNIDSAIAAVTNVRADLGAKQNRFSSTIRNLTNISENVSASKSRIMDADFAAESAK 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTS 263
A+ + A +
Sbjct: 245 LAQNQVSQQAASTMLSQANQQSQ 267
Score = 94.0 bits (231), Expect = 5e-17, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 42/96 (43%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + ID+ I T +G+ +R + + + V R++DAD A
Sbjct: 180 TMAQAQIAIVNIDSAIAAVTNVRADLGAKQNRFSSTIRNLTNISENVSASKSRIMDADFA 239
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ES +L+ Q QQ A LS N + +SL +G
Sbjct: 240 AESAKLAQNQVSQQAASTMLSQANQQSQVAMSLLQG 275
>gi|5107839|gb|AAD28519.2|AF128948_1 flagellin [Escherichia coli]
Length = 523
Score = 108 bits (268), Expect = 3e-21, Method: Composition-based stats.
Identities = 48/375 (12%), Positives = 103/375 (27%), Gaps = 6/375 (1%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ L +R+SSGLR++ A D+AA +IA S+ L+ + G S
Sbjct: 1 NNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVA 60
Query: 75 DIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
+ +S+ + + I+ +D SIQ EI ++ ++ + FNG
Sbjct: 61 QTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGV 120
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
N L D + + + D T + ++T T +
Sbjct: 121 NVLAKDGSMK-IQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGETANTAATLKDMSGF 179
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
+ AS A + A A +
Sbjct: 180 TAAAAPGGTVGVTQYTDKSAVASSVNILNAVAGADGNKVTTSADVGFGTPAAAVTYTYNK 239
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ +A + ++ + + + + + + +
Sbjct: 240 DTNSYSAASDDISSANLAAFLNPQARDTTKATVTIGGKDQDVNIDKSGNLTAADDGAVLY 299
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ + + D++ L K + + T + M +T
Sbjct: 300 MDATGNLTKNNAGGDTQATLAKVATATGAKAATIQTDKGTFTSDGTAFDGASMSIDANTF 359
Query: 372 IKCA--TAAAGKIGS 384
+G+
Sbjct: 360 ANAVKNDTYTATVGA 374
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/305 (10%), Positives = 74/305 (24%)
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
S+ + + + + + +
Sbjct: 219 TTSADVGFGTPAAAVTYTYNKDTNSYSAASDDISSANLAAFLNPQARDTTKATVTIGGKD 278
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ + K +++ D + T + A A +
Sbjct: 279 QDVNIDKSGNLTAADDGAVLYMDATGNLTKNNAGGDTQATLAKVATATGAKAATIQTDKG 338
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ S S+ A+ + N K + T
Sbjct: 339 TFTSDGTAFDGASMSIDANTFANAVKNDTYTATVGAKTYSVTTGSAAADTAYMSNGVLSD 398
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
E + +V TD ++ + + ++ +D I
Sbjct: 399 TPPTYYAQADGSITTTEDAAAGKLVYKGSDGKLTTDTTSKAESTSDPLAALDDAISQIDK 458
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G++ +R+ + + + R+ DAD A+E + +S Q QQ L+
Sbjct: 459 FRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLA 518
Query: 438 IVNNS 442
N
Sbjct: 519 KANQV 523
>gi|302343781|ref|YP_003808310.1| flagellin domain protein [Desulfarculus baarsii DSM 2075]
gi|301640394|gb|ADK85716.1| flagellin domain protein [Desulfarculus baarsii DSM 2075]
Length = 567
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 41/273 (15%), Positives = 79/273 (28%), Gaps = 5/273 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A +A++ L L R+SSGLR++ AAD+AA +I ++M++D L+
Sbjct: 5 INHNMMAANAARNLTTTYGRLSTSVQRLSSGLRINSAADDAAGLAIREMMRADIATLNQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+ MS + + +K I SE + +++
Sbjct: 65 VRNASDAISMIQTAEGAMSVIDEKLIRMKELAEQAATGTYTTAQRIIINSEYQAMAAEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + F D T + F ++ I T +
Sbjct: 125 RIANATDF--NGVKVLDGSLLTLHDGSGMKIHFGTGNDAAEDYYFITIGDMRATSVTGLQ 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + R + + + + + +
Sbjct: 183 VGGGTGLDSVWRTTGLDMAASTDTMANSGAFGIQTSTDGVTWTTYGFLTVDDDDTLDDVV 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
A + + +S +
Sbjct: 243 AKFNDGATSRGNAATNSITFDSGFSSTDLAGDT 275
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 31/326 (9%), Positives = 84/326 (25%), Gaps = 2/326 (0%)
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
FN R + +++ + + + D + + T ++
Sbjct: 244 KFNDGATSRGNAATNSITFDSGFSSTDLAGDTITINGHAFTFSTSTSTSTANTIGLQGLG 303
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+ + A+ + ++ T + + +
Sbjct: 304 SVASIAAATQFAINTWASVGNANGVYATINATASTLTVSLTDRDFGDNTSTLASSNTTLT 363
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
T+ + + V+ + +
Sbjct: 364 LGGATFSGGGTDTTITAAAVEDEDGTGYELQITAEGNTQVRLVQTNGAAFTAASATVGGT 423
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ ++T + S + + + + A + ++
Sbjct: 424 PTTGTTVSEMALNTGAAAYVSDWADGDDDTEWF--SRNASGAWWDGANIITQSAAQLALA 481
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+D I A +G+ +R+ +++ + ++ R+ D D+A E T +
Sbjct: 482 QLDDAINRKDTARASLGATQNRLENTITNLQIQAENLQAAESRISDVDVALEMTEFTRNN 541
Query: 427 TQQQLAVQALSIVNNSTARILSLFRG 452
Q AV L+ N+ L L G
Sbjct: 542 ILAQSAVAMLAQANSLPQLALQLLGG 567
>gi|260878771|ref|ZP_05891126.1| polar flagellin B/D [Vibrio parahaemolyticus AN-5034]
gi|308094195|gb|EFO43890.1| polar flagellin B/D [Vibrio parahaemolyticus AN-5034]
Length = 276
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 41/107 (38%)
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
+T +E V+ ID +K + ++G+ +R + + + + V
Sbjct: 169 DKKNVTVDTIDVTSVGGAQESVAIIDAALKYVDSHRAELGAFQNRFNHAISNLDNINENV 228
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R+ D D A E+T ++ Q Q + L+ + LSL
Sbjct: 229 NASKSRIKDTDFAKETTAMTKSQILSQASSSILAQAKQAPNSALSLL 275
>gi|4760491|dbj|BAA77306.1| flagellin [Pseudomonas putida]
Length = 397
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 44/397 (11%), Positives = 103/397 (25%), Gaps = 27/397 (6%)
Query: 44 AAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE--- 100
AA I+ + S L G G S A+ M ++ +++ ++ A
Sbjct: 1 AAGLQISNRLTSQINGLGTAIKNAGDGISIAQTAEGAMQESTNILQKMRTLALASANGSP 60
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
D KS +E + L ++L IA ++F G N L G++ + + +
Sbjct: 61 SAEDRKSNNAEYSALTAELTRIATTTTFGGRNLLDGSFGTTAFQVGANANQTINMTLGDV 120
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
L T ++ T ++ + V A +
Sbjct: 121 SANKVGSQQLKSVTNAPSTAGGLTGGPIVVTGGGQTSGTITVAAGDSAKAIAAQLNGAVG 180
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
++ K A T+ + +T+ KS + +
Sbjct: 181 GLSATASTEVSFKVTATPAVPANFSLTVAGAKVSFVGVTSTSDLADQLKSNAAKLGVSVN 240
Query: 281 RMGNSDIWVRATTKNSI------------------------TSDPGYTNSTVAKVGNTHY 316
+ + + + +
Sbjct: 241 YDATTQALSVKSDTGENLVFDGGDAGAVGVQVATKNGSGALSGYTALAAAGATIIATGAI 300
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
+++ ++ S + + + + + V I I
Sbjct: 301 SLNSTNSYSMSGAGVGGLFGGAAATSANSAKTVVSNTDVTTAANAQNAVDVITQAITAID 360
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ +G++ +R ++ + D G + D
Sbjct: 361 SQRADLGAVQNRFDSTVANLRSISDNSTAARGVIQDV 397
>gi|117923383|ref|YP_864000.1| flagellin domain-containing protein [Magnetococcus sp. MC-1]
gi|117607139|gb|ABK42594.1| flagellin domain protein [Magnetococcus sp. MC-1]
Length = 271
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN ++++A +KL + L +R+SSG R++ AAD+AA +++ M + L+
Sbjct: 5 VNTNVASLNAQRKLNNSTNALSKTYERLSSGFRINSAADDAAGLTVSTRMTAQIRGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S V +++ +++ + ++ TD + E+TQL S++
Sbjct: 65 ARNANDGISLVQVSEGALAETEAALQRMRELAVQAASGTYTNTDRSDLNDELTQLVSEIT 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FNG L A + I + L +
Sbjct: 125 RIATETKFNGMVTLSATQTFDIQVGADAGQKITINTTAAGASALGVTAASITSAGLASA 183
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 36/96 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ ID I + +G+ +R+ + + + + R++DAD
Sbjct: 175 ITSAGLASAAITKIDAAIASVSDMRSVLGAQQNRLEAAIANLTNVSERTQAARSRIMDAD 234
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+A E+ L+ QQ L+ N LSL
Sbjct: 235 IAQETAALTRNAILQQAGTAILAQANQQPQLALSLL 270
>gi|203284072|ref|YP_002221812.1| flagellar filament 41 kDa core protein [Borrelia duttonii Ly]
gi|201083515|gb|ACH93106.1| flagellar filament 41 kDa core protein [Borrelia duttonii Ly]
Length = 335
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNAINVANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + + + V+ +K D SIQ E+ QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLDEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEVEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNHMHMLSNRSSAEHVRTAE 149
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 38/101 (37%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ T +G+ +R+ + + + ++ ++
Sbjct: 235 SPVNVTTAVDANMSLTKIEDAIRMITDQRANLGAFQNRLESVKASTEYAIENLKASYAQI 294
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DA M E + Q A+ ++ N +LSL R
Sbjct: 295 KDATMTDEIVASTTNSILTQSAMAMIAQANQVPQYVLSLLR 335
>gi|148546728|ref|YP_001266830.1| flagellin [Pseudomonas putida F1]
gi|148510786|gb|ABQ77646.1| flagellin domain protein [Pseudomonas putida F1]
Length = 283
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 32/233 (13%), Positives = 71/233 (30%), Gaps = 3/233 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN +++ + L + L R+SSGL+++ A D+AA IA M S +
Sbjct: 3 LTVNTNTTSLGVQKNLNRASDALGTSMTRLSSGLKINSAKDDAAGLQIATRMTSQIRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQ 118
S A+ M + +++ ++ D ++ E + +
Sbjct: 63 MAIKNANDAISIAQTAEGAMQEQTNILQRMRELAVQSRNDNNSEADRDALDKEFQSMLKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + NG+N L T + + + + T +
Sbjct: 123 IDRIAGSTQLNGKNLLDGSASDMTFQVGSNTGSDNQITISLSDAMNTTGALSGLSGQSIT 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ I + + +++ L +
Sbjct: 183 GADSAAAEATFTAALSAIDDALNAINSTRADLGAVQNRLTSTINNLQNINENA 235
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 57/139 (41%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
T + L +++ ++ L+ D+ + +S ID +
Sbjct: 145 MTFQVGSNTGSDNQITISLSDAMNTTGALSGLSGQSITGADSAAAEATFTAALSAIDDAL 204
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ +G++ +R+ + ++ + + E GR+ D D A+E+ +L+ QT QQ +
Sbjct: 205 NAINSTRADLGAVQNRLTSTINNLQNINENAEAARGRVQDTDFAAETAQLTKQQTLQQAS 264
Query: 433 VQALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 TSILAQANQLPSAVLKLLQ 283
>gi|4903032|dbj|BAA77941.1| flagellin [Leptospira sp. Castellon 3]
gi|4903044|dbj|BAA77947.1| flagellin [Leptospira sp. Mitis-Johnson]
gi|4903052|dbj|BAA77951.1| flagellin [Leptospira sp. M84]
gi|4903058|dbj|BAA77954.1| flagellin [Leptospira sp. Poi]
gi|4903068|dbj|BAA77959.1| flagellin [Leptospira sp. Veldrat Batavis 46]
gi|6899828|dbj|BAA90536.1| flagellin [Leptospira sp. EP]
gi|45735450|dbj|BAD13289.1| flagellin [Leptospira borgpetersenii]
gi|45735452|dbj|BAD13290.1| flagellin [Leptospira borgpetersenii]
gi|45735454|dbj|BAD13291.1| flagellin [Leptospira borgpetersenii]
gi|45735456|dbj|BAD13292.1| flagellin [Leptospira borgpetersenii]
gi|45735458|dbj|BAD13293.1| flagellin [Leptospira borgpetersenii]
gi|45735460|dbj|BAD13294.1| flagellin [Leptospira borgpetersenii]
gi|45735462|dbj|BAD13295.1| flagellin [Leptospira borgpetersenii]
Length = 248
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 26/236 (11%), Positives = 70/236 (29%), Gaps = 3/236 (1%)
Query: 23 NLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82
++ +SSG+R++ AAD+A+ ++++ +++ L G S + A+ +
Sbjct: 3 AVDKTMKALSSGMRINSAADDASGLAVSEKLRTQINGLRQAERNTEDGMSFIQTAEGFLE 62
Query: 83 KAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
+ +++ I+ D + +Q E++ L ++ IA + FN
Sbjct: 63 QTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVDRIASQAEFNKFKLFEGQFA 122
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + ++ + I T+ + D
Sbjct: 123 RGSRVASMWFHMGPNQNQRERFYIGTMTSKALKLVKADGRPIAISSPGEANDVIGLADAA 182
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + + L + + D + +
Sbjct: 183 LTRIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDADMAEEVVSLTTKQI 238
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 30/83 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ D + +G+ +R+ + + ++ R+ DAD
Sbjct: 166 ISSPGEANDVIGLADAALTRIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDAD 225
Query: 415 MASESTRLSALQTQQQLAVQALS 437
MA E L+ Q Q L+
Sbjct: 226 MAEEVVSLTTKQILVQSGTAMLA 248
>gi|167623370|ref|YP_001673664.1| flagellin domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167353392|gb|ABZ76005.1| flagellin domain protein [Shewanella halifaxensis HAW-EB4]
Length = 272
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 39/228 (17%), Positives = 83/228 (36%), Gaps = 3/228 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M A + L + NL +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSMKAQKNLNASSQNLATSMERLSSGLRINSAKDDAAGLAISNRLDSQVRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQL 119
S I++ M + +++ +++ D SI+ EI L ++
Sbjct: 64 GMRNANDAISIAQISEGAMQEQTNMLQRMRDLTIQASNGANSSDDIASIKKEIDALAGEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I ++F + D + + G I KV +++ T +
Sbjct: 124 TSIGNTTAFGNTKLMNGDFSAGKSFQVGHQKGEDITVKVQKVNASSLAVGSLTLTNSANR 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+ T+ + + + +++ S +
Sbjct: 184 QSALTKIDAAIKTIDSQRADLGAVQNRLSHNISNSANTQANVADAKSR 231
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 29/209 (13%), Positives = 59/209 (28%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + + + + A+ + DI +++ +
Sbjct: 64 GMRNANDAISIAQISEGAMQEQTNMLQRMRDLTIQASNGANSSDDIASIKKEIDALAGEI 123
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+T A D + E + + +
Sbjct: 124 TSIGNTTAFGNTKLMNGDFSAGKSFQVGHQKGEDITVKVQKVNASSLAVGSLTLTNSANR 183
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ ++ ID IK + +G++ +R+ + V R+VD D A E+
Sbjct: 184 QSALTKIDAAIKTIDSQRADLGAVQNRLSHNISNSANTQANVADAKSRIVDVDFAKETAA 243
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q QQ L+ N LSL
Sbjct: 244 MTKNQVLQQTGSAMLAQANQLPQVALSLL 272
>gi|51317830|gb|AAU00036.1| flagellin [Borrelia hermsii]
gi|51317832|gb|AAU00037.1| flagellin [Borrelia hermsii]
gi|51317834|gb|AAU00038.1| flagellin [Borrelia hermsii]
gi|51317836|gb|AAU00039.1| flagellin [Borrelia hermsii]
Length = 334
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNSINATNLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSAAQNVKTAE 149
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 52/169 (30%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G+ W + + N + V N ++ + +
Sbjct: 166 GSQASWTLRVHVGANQDEAIAVNIYASNVANLFAGEGAQAAPEQEIGQQEEGQAAPAPAA 225
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + ++ I+ I+ + +G+ +R+ +D + +
Sbjct: 226 APAQGGVNSPINVTTAVDANMSLAKIEGAIRMVSDQRANLGAFQNRLESIKDSTEYAIEN 285
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ ++ DA M E + Q A+ ++ N +LSL R
Sbjct: 286 LKASYAQIKDATMTDEVVSSTTHSILTQSAMAMIAQANQVPQYVLSLLR 334
>gi|42526983|ref|NP_972081.1| flagellar filament core protein [Treponema denticola ATCC 35405]
gi|41817407|gb|AAS11992.1| flagellar filament core protein [Treponema denticola ATCC 35405]
gi|325474046|gb|EGC77234.1| flagellar filament core protein [Treponema denticola F0402]
Length = 285
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 3/172 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM A ++ +L +++SS R++ A D+A+ ++++ M+S L+
Sbjct: 3 INHNMSAMFAQRQGGVNELHLAKNIEKLSSAQRINRAGDDASGLAVSEKMRSQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
I G S + + + + D++ ++ D IQ E++QL ++
Sbjct: 63 GQNIQNGVSFIQATEGYLGETTDIIQRLRELAIQASNGIYSAEDRMQIQVEVSQLVDEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
IA + FNG N L + + + D K+ I T+
Sbjct: 123 RIASHAQFNGMNILTGRFAQDSVTGPMQLHVGANMDQREKIYIGTMTATALG 174
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 49/166 (29%)
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
++ A+ + V + + + + ++
Sbjct: 120 EVDRIASHAQFNGMNILTGRFAQDSVTGPMQLHVGANMDQREKIYIGTMTATALGIIGAQ 179
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ + + +D +K +G+ +R + D I + + ++
Sbjct: 180 QGGEDKMISMSSVDGANMALGALDNALKQINKQRADLGAYQNRFEMAYDGIAIAAENMQA 239
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ DADMA E + Q Q L+ N ++ L +
Sbjct: 240 AESRIRDADMAKEIVDYTKNQILIQSGTAMLAQANAQPQAVVRLLQ 285
>gi|483459|emb|CAA49316.1| p41 [Borrelia burgdorferi]
Length = 336
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVRTAE 149
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/208 (10%), Positives = 58/208 (27%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 189 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+ ++ N +LSL R
Sbjct: 309 TNSILTQCAMAMIAQANQVPQYVLSLLR 336
>gi|227820868|ref|YP_002824838.1| flagellin protein FlaD [Sinorhizobium fredii NGR234]
gi|227339867|gb|ACP24085.1| flagellin protein FlaD [Sinorhizobium fredii NGR234]
Length = 320
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 97/286 (33%), Positives = 137/286 (47%), Gaps = 2/286 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI+TN +AM+A Q LR IN NL+ Q RVSSG RV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSIMTNAAAMAALQTLRSINRNLDETQSRVSSGYRVETAADNAAYWSIATTMRSDNAAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S V DA+GLG++KVD A A + ID+MS +K K+ A E G D I E+ QL+ QL
Sbjct: 61 STVQDALGLGAAKVDTAYAALDTVIDLMSEVKAKLVAAREPGVDKTKIDKELAQLKEQLV 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A+ +SF+GENWL D TA KS++ SF R +G V +TT+DY ++
Sbjct: 121 SAAQSASFSGENWLYNDAA--TAVGTKSIVASFNRSADGSVSVTTLDYDTSGSILVDVQD 178
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+D + + ++ + + + TT + D
Sbjct: 179 ASRGLLTMAVDADTLVSAPTGSAREYYLIDAGSPPAGTEIALSETTTDEELDDMISVVDD 238
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD 286
+ L A + + + + + +
Sbjct: 239 LVSQLTNSAATLGAITSRIEMQENFVANLMDVIDKGVGRLVDADMN 284
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 56/200 (28%), Positives = 91/200 (45%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ AA +A + + + + + + + N + G V
Sbjct: 120 VSAAQSASFSGENWLYNDAATAVGTKSIVASFNRSADGSVSVTTLDYDTSGSILVDVQDA 179
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ ++ TL S + +++M+S +D
Sbjct: 180 SRGLLTMAVDADTLVSAPTGSAREYYLIDAGSPPAGTEIALSETTTDEELDDMISVVDDL 239
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ T +A +G+I+SRI +QE+F+ + D ++KGVGRLVDADM ESTRL ALQTQQQL
Sbjct: 240 VSQLTNSAATLGAITSRIEMQENFVANLMDVIDKGVGRLVDADMNEESTRLKALQTQQQL 299
Query: 432 AVQALSIVNNSTARILSLFR 451
+Q+LSI N ++ IL LF+
Sbjct: 300 GIQSLSIANTNSENILRLFQ 319
>gi|203287611|ref|YP_002222626.1| flagellar filament 41 kDa core protein [Borrelia recurrentis A1]
gi|201084831|gb|ACH94405.1| flagellar filament 41 kDa core protein [Borrelia recurrentis A1]
Length = 335
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNAINVANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + + + V+ +K D SIQ E+ QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLDEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEVEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNHMHMLSNRSSAEHVRTAE 149
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 38/101 (37%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ T +G+ +R+ + + + ++ ++
Sbjct: 235 SPVNVTTAVDANMSLTKIEDAIRMITDQRANLGAFQNRLESVKASTEYAIENLKASYAQI 294
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DA M E + Q A+ ++ N +LSL R
Sbjct: 295 KDATMTDEIVASTTNSILTQSAMAMIAQANQVPQYVLSLLR 335
>gi|1311452|dbj|BAA11613.1| flagellin protein [Borrelia coriaceae]
Length = 326
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNSINAANLSKTQEKLSSGYRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + + + V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLDEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
I+ + +N + L + A+
Sbjct: 123 RISDQAQYNQMHMLSNKSAAENVKTAE 149
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 34/94 (36%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ T +G+ +R+ +D + + ++ ++
Sbjct: 233 SPINVTTAVDANISLAKIEDAIRMVTDQRANLGAFQNRLESIKDSTEYAIENLKASYAQI 292
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
DA M E + Q A+ ++ N
Sbjct: 293 KDATMTDEVVASTTSSILTQSAMAMIAQANQVPQ 326
>gi|51317824|gb|AAU00033.1| flagellin [Borrelia hermsii]
gi|51317826|gb|AAU00034.1| flagellin [Borrelia hermsii]
gi|51317828|gb|AAU00035.1| flagellin [Borrelia hermsii]
gi|51317838|gb|AAU00040.1| flagellin [Borrelia hermsii]
gi|51317840|gb|AAU00041.1| flagellin [Borrelia hermsii]
gi|51317842|gb|AAU00042.1| flagellin [Borrelia hermsii]
gi|51317844|gb|AAU00043.1| flagellin [Borrelia hermsii]
gi|51317846|gb|AAU00044.1| flagellin [Borrelia hermsii]
gi|112031330|gb|ABH88149.1| FlaB [Borrelia hermsii]
gi|112031334|gb|ABH88151.1| FlaB [Borrelia hermsii]
gi|164564662|gb|ABY61083.1| flagellin [Borrelia hermsii]
gi|164564670|gb|ABY61087.1| flagellin [Borrelia hermsii]
Length = 334
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNSINATNLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSAAQNVKTAE 149
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 52/169 (30%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G+ W + + N + V N ++ + +
Sbjct: 166 GSQASWTLRVHVGANQDEAIAVNIYASNVANLFAGEGAQAAPEQEIGQQEEGQAAPAPAA 225
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + ++ I+ I+ + +G+ +R+ +D + +
Sbjct: 226 APAQGGVNSPINVTTAVDANMSLAKIEGAIRMVSDQRANLGAFQNRLESIKDSTEYAIEN 285
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ ++ DA M E + Q A+ ++ N +LSL R
Sbjct: 286 LKASYAQIKDATMTDEVVASTTHSILTQSAMAMIAQANQVPQYVLSLLR 334
>gi|149911694|ref|ZP_01900302.1| flagellin [Moritella sp. PE36]
gi|149805224|gb|EDM65241.1| flagellin [Moritella sp. PE36]
Length = 272
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 72/181 (39%), Gaps = 3/181 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +++++ + L + L+ +R+SSG R++ AAD+AA I+ +++ L+
Sbjct: 5 VNTNVASLNSQRNLSNATNALQTSFERLSSGKRINSAADDAAGLQISSRLEAQVSGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S G S A+ + + +++ ++ D ++ +E T+L++++
Sbjct: 65 SRNANDGISLAQTAEGALDETTNMLQRMRVLSIQSANGSNSAADRVALDTEFTELKNEID 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++ ++F G L A + ++ T +
Sbjct: 125 RVSTDTTFGGMQLLDASFNQDFQVGADANQTINVKITMDMDSAGLGLATDTLTTAAGAQT 184
Query: 181 T 181
Sbjct: 185 A 185
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 40/95 (42%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ ++ +D+ I T +G+ +R + + + V R++D D
Sbjct: 177 TTAAGAQTAIANLDSAIASVTNVRADLGAKQNRFSSTIRNLTNISENVSASKSRILDTDF 236
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A+ES +L+ Q QQ A LS N + +SL
Sbjct: 237 AAESAKLAQNQVSQQAASTMLSQANQQSQVAMSLL 271
>gi|4903038|dbj|BAA77944.1| flagellin [Leptospira sp. Kremastos]
Length = 248
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 26/236 (11%), Positives = 70/236 (29%), Gaps = 3/236 (1%)
Query: 23 NLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82
++ +SSG+R++ AAD+A+ ++++ +++ L G S + A+ +
Sbjct: 3 AVDKTMKALSSGMRINSAADDASGLAVSEKLRTQVNGLRQAERNTEDGMSFIQTAEGFLE 62
Query: 83 KAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
+ +++ I+ D + +Q E++ L ++ IA + FN
Sbjct: 63 QTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVDRIASQAEFNKFKLFEGQFA 122
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + ++ + I T+ + D
Sbjct: 123 RGSRVASMWFHMGPNQNQRERFYIGTMTSKALKLVKADGKPIAISSPGEANDVIGLADAA 182
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + + L + + D + +
Sbjct: 183 LTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDADMAEEVVSLTTKQI 238
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 30/83 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ D + +G+ +R+ + + ++ R+ DAD
Sbjct: 166 ISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDAD 225
Query: 415 MASESTRLSALQTQQQLAVQALS 437
MA E L+ Q Q L+
Sbjct: 226 MAEEVVSLTTKQILVQSGTAMLA 248
>gi|6691459|dbj|BAA89303.1| flagellin [Leptospira sp.]
Length = 248
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 26/236 (11%), Positives = 70/236 (29%), Gaps = 3/236 (1%)
Query: 23 NLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82
++ +SSG+R++ AAD+A+ ++++ +++ L G S + A+ +
Sbjct: 3 AVDKTMKALSSGMRINSAADDASGLAVSEKLRTQVNGLRQAERNTEDGMSFIQTAEGFLE 62
Query: 83 KAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
+ +++ I+ D + +Q E++ L ++ IA + FN
Sbjct: 63 QTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVDRIASQAEFNKFKLFEGQFA 122
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + ++ + I T+ + D
Sbjct: 123 RGSRVASMWFHMGPNQNQRERFYIGTMTSKALKLVKADGRPIAISSPGEANDVIGVADAA 182
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + + L + + D + +
Sbjct: 183 LTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDADMAEEVVSLTTKQI 238
Score = 82.9 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 30/83 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ D + +G+ +R+ + + ++ R+ DAD
Sbjct: 166 ISSPGEANDVIGVADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDAD 225
Query: 415 MASESTRLSALQTQQQLAVQALS 437
MA E L+ Q Q L+
Sbjct: 226 MAEEVVSLTTKQILVQSGTAMLA 248
>gi|332703536|ref|ZP_08423624.1| flagellin domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332553685|gb|EGJ50729.1| flagellin domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 304
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 79/231 (34%), Gaps = 3/231 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N +M+A++ L NL R+SSGLRV AAD+AA +I ++M++D + +
Sbjct: 3 LVINHNLMSMNAARNLNTSYGNLSTSTRRLSSGLRVGTAADDAAGLAIRELMRADIASYN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K I SE + S+
Sbjct: 63 QGVRNANDAISLIQTADGALQVVDEKLIRMKELAQQAATGTYNSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG L +L + A G ++I E
Sbjct: 123 ITRIASATDFNGTYLLNGNLSKNPGMTAGQSHDGSGLKSTGPLKIHFGTGNDSAEDYYYI 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
+ T + + + + + + + + + K +
Sbjct: 183 TIGGCTASMLGMGMSADVNAMGRTISTQERAQEALTAINAAITSKDNIRAH 233
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/304 (11%), Positives = 84/304 (27%), Gaps = 1/304 (0%)
Query: 150 IGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ I + + R G + ++++ S
Sbjct: 1 MSLVINHNLMSMNAARNLNTSYGNLSTSTRRLSSGLRVGTAADDAAGLAIRELMRADIAS 60
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
+ + T GA + + S
Sbjct: 61 YNQGVRNANDAISLIQTADGALQVVDEKLIRMKELAQQAATGTYNSDQRLIIDSEYQAMA 120
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
S ++ G + + +T+ + S + G + T + + +
Sbjct: 121 SEITRIASATDFNGTYLLNGNLSKNPGMTAGQSHDGSGLKSTGPLKIHFGTGNDSAEDYY 180
Query: 330 DLPKEIDSGYSMVTLNITRHANT-DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ + + + + +E ++ I+ I +G++ +R
Sbjct: 181 YITIGGCTASMLGMGMSADVNAMGRTISTQERAQEALTAINAAITSKDNIRAHLGAMQNR 240
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ +++M + ++ R+ D D+ASE T Q Q AV L+ N+ +
Sbjct: 241 LENTVTNLQIMVENLQASESRISDVDVASEMTEFVRQQILSQSAVAMLAQANSLPKMAMQ 300
Query: 449 LFRG 452
L G
Sbjct: 301 LIGG 304
>gi|90418386|ref|ZP_01226298.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1]
gi|90338058|gb|EAS51709.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1]
Length = 322
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 88/286 (30%), Positives = 138/286 (48%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN +AM+A Q L+ N +++ Q+R+S+G RV++A DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNIAAMAALQTLQATNRSMDATQNRISTGFRVAEAKDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV D++GLG++KVDIA + AIDV+ IK K+ A E G D IQSEI++L+ QL+
Sbjct: 61 SAVEDSLGLGAAKVDIAYTALESAIDVVDEIKAKLVAASEPGVDKTKIQSEISELKKQLQ 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SF+GENWL+ D + S + + T+D ++ +
Sbjct: 121 SIASSASFSGENWLQNDASVAAGSKDIVASFNRDSTGAVSIGTITVDVTAMTLIGTVNET 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + D + +D + + + TT+
Sbjct: 181 TGVLTKNYHADGISTPIGDATDYVLLDAGATGTAASGTEIALTGTTTTLEISSMIKVVDA 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD 286
K + + L AA + + + S+++ + +
Sbjct: 241 ILKDMTNVAANLGAAKSRIELQQNFVSNLTDSISSGIGALVDADMT 286
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/97 (48%), Positives = 63/97 (64%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
L + M+ +D +K T A +G+ SRI LQ++F+ + D++ G+G LVDAD
Sbjct: 225 TTTTLEISSMIKVVDAILKDMTNVAANLGAAKSRIELQQNFVSNLTDSISSGIGALVDAD 284
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
M ESTRL ALQTQQQL VQALSI N+S+ IL LF+
Sbjct: 285 MTEESTRLKALQTQQQLGVQALSIANSSSQAILQLFQ 321
>gi|190890374|ref|YP_001976916.1| flagellin C protein [Rhizobium etli CIAT 652]
gi|190695653|gb|ACE89738.1| flagellin C protein [Rhizobium etli CIAT 652]
gi|327193049|gb|EGE59961.1| flagellin C protein [Rhizobium etli CNPAF512]
Length = 303
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 86/146 (58%), Positives = 104/146 (71%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AM+A Q LR IN +LE Q+RVSSG RV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNVAAMAALQTLRGINDSLEGTQNRVSSGYRVEKAADNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A + M AIDV+S IK KI A E+G D +Q EI QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYSAMDSAIDVISEIKAKIVAATEKGVDKTKVQEEIGQLQQQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA+ +SF+GENW+ G+ +
Sbjct: 121 SIAQSASFSGENWVAGADGTKSVVST 146
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/138 (35%), Positives = 79/138 (57%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ S + + + ++ + + + ++ I+ ++
Sbjct: 165 DTSSSGNVLFGMTSTGTIDTSAGIIGTSYGTIGSIYSMDISTFGSVEISMALTSIEAGLE 224
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
T AA ++GSIS+RI LQE+F+ + D+++ GVGRLVDADM ES++L+ALQTQQQLA+
Sbjct: 225 AMTKAASQLGSISTRIELQENFVGALSDSIDSGVGRLVDADMEEESSKLTALQTQQQLAI 284
Query: 434 QALSIVNNSTARILSLFR 451
Q+LSI N+S IL+LFR
Sbjct: 285 QSLSIANSSAQNILTLFR 302
>gi|254457200|ref|ZP_05070628.1| flagellin FliC [Campylobacterales bacterium GD 1]
gi|207085992|gb|EDZ63276.1| flagellin FliC [Campylobacterales bacterium GD 1]
Length = 278
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 67/177 (37%), Gaps = 3/177 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN AM+A + N L+ + +SSGLR++ AAD++A +IA + + + L
Sbjct: 5 INTNIGAMNAHRNATMNNIGLDKSLNSLSSGLRINKAADDSAGLAIANKLSAQSQGLGQS 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
G + A + + +++ ++ T D I E+T L ++
Sbjct: 65 IRNSNDGIGLLQTADGALEEYGNILKRVRVLATQAANDTQDATSRGYIGQEVTALLAEAN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
DIA + FNG L GS A + I T +
Sbjct: 125 DIATTTKFNGVKILDGTAGSGAALGTFVFHTGAYTTETQSAAIGTATTAVLVTGATA 181
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 42/138 (30%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T T + E S A + + E ++ +D I
Sbjct: 141 TAGSGAALGTFVFHTGAYTTETQSAAIGTATTAVLVTGATAVDTRANAEITIASMDESIT 200
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
IG+ +++ I + + + ++ D D A+ES + Q
Sbjct: 201 KVDGKRATIGAAQNKLESTVRNISVTQVNIAAAESQIRDVDFAAESANFAKHNILAQSGS 260
Query: 434 QALSIVNNSTARILSLFR 451
A+S N +L L +
Sbjct: 261 YAMSQANAVQQNVLRLLQ 278
>gi|4903020|dbj|BAA77935.1| flagellin [Leptospira sp. Akiyami A]
gi|4903022|dbj|BAA77936.1| flagellin [Leptospira sp. Akiyami B]
gi|4903024|dbj|BAA77937.1| flagellin [Leptospira sp. Akiyami C]
gi|4903026|dbj|BAA77938.1| flagellin [Leptospira sp. Ballico]
gi|4903030|dbj|BAA77940.1| flagellin [Leptospira sp. Benjamin]
gi|4903034|dbj|BAA77942.1| flagellin [Leptospira sp. Djasiman]
gi|4903036|dbj|BAA77943.1| flagellin [Leptospira sp. Hond Utrecht IV]
gi|4903040|dbj|BAA77945.1| flagellin [Leptospira sp. LT398]
gi|4903042|dbj|BAA77946.1| flagellin [Leptospira sp. Mankarso]
gi|4903046|dbj|BAA77948.1| flagellin [Leptospira sp. Moskva V]
gi|4903048|dbj|BAA77949.1| flagellin [Leptospira sp. Munchen C90]
gi|4903050|dbj|BAA77950.1| flagellin [Leptospira sp. M20]
gi|4903054|dbj|BAA77952.1| flagellin [Leptospira sp. Naam]
gi|4903060|dbj|BAA77955.1| flagellin [Leptospira sp. Pomona]
gi|4903062|dbj|BAA77956.1| flagellin [Leptospira sp. Rachmat]
gi|4903064|dbj|BAA77957.1| flagellin [Leptospira sp. RGA]
gi|4903070|dbj|BAA77960.1| flagellin [Leptospira sp. Vl 90C]
gi|4903072|dbj|BAA77961.1| flagellin [Leptospira sp. Van Tienen]
gi|4903074|dbj|BAA77962.1| flagellin [Leptospira sp. Zanoni]
gi|4903076|dbj|BAA77963.1| flagellin [Leptospira sp. 3522C]
gi|4903078|dbj|BAA77964.1| flagellin [Leptospira sp. 3705]
gi|6899816|dbj|BAA90530.1| flagellin [Leptospira sp. UP-MMC]
gi|6899818|dbj|BAA90531.1| flagellin [Leptospira sp. UP-PGH]
gi|6899820|dbj|BAA90532.1| flagellin [Leptospira sp. SPO4]
gi|6899822|dbj|BAA90533.1| flagellin [Leptospira sp. AB]
gi|6899824|dbj|BAA90534.1| flagellin [Leptospira sp. DQ]
gi|6899826|dbj|BAA90535.1| flagellin [Leptospira sp. EA]
gi|6899830|dbj|BAA90537.1| flagellin [Leptospira sp. G]
gi|6899832|dbj|BAA90538.1| flagellin [Leptospira sp. MC]
gi|23200557|dbj|BAC16349.1| flagellin [Leptospira interrogans serovar Icterohaemorrhagiae]
gi|223019781|dbj|BAH22435.1| flagellin [Leptospira sp. KRC-57]
gi|223019783|dbj|BAH22436.1| flagellin [Leptospira sp. KRC-146]
gi|223019785|dbj|BAH22437.1| flagellin [Leptospira sp. NRC-29]
gi|223890083|dbj|BAH22857.1| flagellin [Leptospira sp. RnS3-1]
gi|223890085|dbj|BAH22858.1| flagellin [Leptospira sp. RnS3-3]
gi|223890087|dbj|BAH22859.1| flagellin [Leptospira sp. RnS3-4]
gi|223890089|dbj|BAH22860.1| flagellin [Leptospira sp. RnS3-6]
gi|223890091|dbj|BAH22861.1| flagellin [Leptospira sp. RnS3-10]
gi|223890093|dbj|BAH22862.1| flagellin [Leptospira sp. RnS3-16]
gi|223890095|dbj|BAH22863.1| flagellin [Leptospira sp. RnS3-19]
gi|223890097|dbj|BAH22864.1| flagellin [Leptospira sp. RnS3-20]
gi|223890099|dbj|BAH22865.1| flagellin [Leptospira sp. RnS3-22]
gi|223890101|dbj|BAH22866.1| flagellin [Leptospira sp. RnS3-24]
gi|223890103|dbj|BAH22867.1| flagellin [Leptospira sp. RnS3-25]
gi|223890105|dbj|BAH22868.1| flagellin [Leptospira sp. RnS3-28]
gi|223890107|dbj|BAH22869.1| flagellin [Leptospira sp. RnY-2]
gi|223890109|dbj|BAH22870.1| flagellin [Leptospira sp. Rn-Y3]
gi|223890111|dbj|BAH22871.1| flagellin [Leptospira sp. Rn-Y4]
gi|223890113|dbj|BAH22872.1| flagellin [Leptospira sp. RnSMD-1]
gi|223890115|dbj|BAH22873.1| flagellin [Leptospira sp. RnKNM-6]
gi|223890117|dbj|BAH22874.1| flagellin [Leptospira sp. RnKCH-1]
gi|223890119|dbj|BAH22875.1| flagellin [Leptospira sp. RnTKD-2]
gi|223890121|dbj|BAH22876.1| flagellin [Leptospira sp. RnTKD-4]
gi|223890123|dbj|BAH22877.1| flagellin [Leptospira sp. RnTKD-8]
gi|223890125|dbj|BAH22878.1| flagellin [Leptospira sp. RnTKD-10]
gi|223890127|dbj|BAH22879.1| flagellin [uncultured Leptospira sp.]
gi|223890129|dbj|BAH22880.1| flagellin [uncultured Leptospira sp.]
gi|223890131|dbj|BAH22881.1| flagellin [uncultured Leptospira sp.]
gi|223890133|dbj|BAH22882.1| flagellin [uncultured Leptospira sp.]
Length = 248
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 26/236 (11%), Positives = 70/236 (29%), Gaps = 3/236 (1%)
Query: 23 NLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82
++ +SSG+R++ AAD+A+ ++++ +++ L G S + A+ +
Sbjct: 3 AVDKTMKALSSGMRINSAADDASGLAVSEKLRTQVNGLRQAERNTEDGMSFIQTAEGFLE 62
Query: 83 KAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
+ +++ I+ D + +Q E++ L ++ IA + FN
Sbjct: 63 QTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVDRIASQAEFNKFKLFEGQFA 122
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + ++ + I T+ + D
Sbjct: 123 RGSRVASMWFHMGPNQNQRERFYIGTMTSKALKLVKADGRPIAISSPGEANDVIGLADAA 182
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + + L + + D + +
Sbjct: 183 LTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDADMAEEVVSLTTKQI 238
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 30/83 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ D + +G+ +R+ + + ++ R+ DAD
Sbjct: 166 ISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDAD 225
Query: 415 MASESTRLSALQTQQQLAVQALS 437
MA E L+ Q Q L+
Sbjct: 226 MAEEVVSLTTKQILVQSGTAMLA 248
>gi|229144370|ref|ZP_04272776.1| Flagellin [Bacillus cereus BDRD-ST24]
gi|228639157|gb|EEK95581.1| Flagellin [Bacillus cereus BDRD-ST24]
Length = 266
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 61/177 (34%), Gaps = 3/177 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A+DN A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVSMEHLATGKKLNHASDNPANIAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ +E L Q+
Sbjct: 63 IRNDEDAISMLRTAEAALQTVTNILQRMRDLAVQSTNGTNSNKNRDSLNTEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
I+ + FN + T + Q + +
Sbjct: 123 YISETTEFNDLSVFDGQNRPITLDDISHTVHMTKHIPPSPTQHNIKISTEQEASAAI 179
Score = 89.8 bits (220), Expect = 9e-16, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 71/242 (29%)
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ KK A+ + A + +A G+ A + T +
Sbjct: 23 MNVSMEHLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNDEDAISMLRTAEAALQT 82
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + + + T T T + + +
Sbjct: 83 VTNILQRMRDLAVQSTNGTNSNKNRDSLNTEFQSLTEQIGYISETTEFNDLSVFDGQNRP 142
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
L + + + + + + + + I+ ++ + +GSI +R
Sbjct: 143 ITLDDISHTVHMTKHIPPSPTQHNIKISTEQEASAAILKIEEALQNVSLHRADLGSIINR 202
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + A+ V ++ DADMA E + + ++A+ +S N +
Sbjct: 203 LQFNIENLNSQSMALTDAVSQVEDADMAQEISDFLKFRLLTEVALSMVSQANQIPQMVSK 262
Query: 449 LF 450
L
Sbjct: 263 LL 264
>gi|114054895|gb|ABI50047.1| FlaA [Clostridium botulinum]
Length = 242
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 61/159 (38%), Gaps = 3/159 (1%)
Query: 26 VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAI 85
+++SSGLR++ A D+AA +I++ M+ L S S + A+ ++
Sbjct: 5 KSMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLDQASRNSQDSISLIQTAEGAXTETH 64
Query: 86 DVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSST 142
+ ++ G D +I++EIT+L +++ I++ + FN + L
Sbjct: 65 SIXQRMRELAVQGANDTXVTADRAAIKTEITELNNEINRISQQTEFNTQKLLSGGFXXKN 124
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I + + T + + +
Sbjct: 125 FQIGANKAQTIKLXIGDMSAKTLGVSGVSVSDAXXATDS 163
Score = 79.8 bits (194), Expect = 8e-13, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 32/89 (35%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T + + ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 140 GDMSAKTLGVSGVSVSDAXXATDSIATIDXALGTVSTERAKLGANQNRLEHTINNLNTSS 199
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ ++ R+ D DMA E S
Sbjct: 200 ENLQAAESRVRDVDMAKEMMAFSKNNILN 228
>gi|307131584|ref|YP_003883600.1| flagellar filament structural protein (flagellin) [Dickeya dadantii
3937]
gi|18642459|emb|CAD22870.1| flagellin [Erwinia chrysanthemi]
gi|306529113|gb|ADM99043.1| flagellar filament structural protein (flagellin) [Dickeya dadantii
3937]
Length = 280
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 3/148 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ A L +L+ +R+SSGL ++ A DNAA I M + L
Sbjct: 1 MAVINTNSMSLLAQTNLNKSQSSLQTAIERLSSGLAINSAKDNAAGSGIVNGMTAQIKGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQS 117
+ S G S V A+ + D + I+ D +IQ+EI +
Sbjct: 61 TQASKNANDGVSLVQTAEGNLDTINDNLQRIRELAVQAANDTNGTNDRTAIQTEINRRVD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASI 145
++ +A ++FNG+ L + ++ +I
Sbjct: 121 EINRVAASANFNGKALLDGTVTATGFNI 148
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 47/141 (33%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ + + + + + + + +VS IDT
Sbjct: 140 TVTATGFNIQVGAGTTANDAISVGSSALINATSGGLGITTTNTDVSTAAGATALVSAIDT 199
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
++ A IG+ +R D + + + R+ DAD A+E + +S Q QQ
Sbjct: 200 ALQTINTAKANIGATLNRFQSTIDNLSNTINNLSNARSRIQDADYATEVSNMSRAQILQQ 259
Query: 431 LAVQALSIVNNSTARILSLFR 451
L+ N +L L +
Sbjct: 260 AGTSVLAQANQVPQTVLKLLQ 280
>gi|148980284|ref|ZP_01815971.1| lateral flagellin LafA [Vibrionales bacterium SWAT-3]
gi|145961303|gb|EDK26613.1| lateral flagellin LafA [Vibrionales bacterium SWAT-3]
Length = 278
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 66/164 (40%), Gaps = 3/164 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN++++ L+ N L +++S+G R++ AAD+AA IA +++ + ++
Sbjct: 4 SVHTNYASLVTQNTLQSTNSALTKSMEKLSTGFRINSAADDAAGLQIANRLEAQSRGMNV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S + A+ + ++ + + D +I E L +L
Sbjct: 64 AMRNSQDAISMMQTAEGAFDEMTNIAYRMNDLAVQYANGTNSTADQTAIDVEFNALSDEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
+IA ++F G N L T + A + + S
Sbjct: 124 ANIASNTNFGGTNLLTTGSFGAGAVVFQIGTSSTETLSVDASTE 167
Score = 76.7 bits (186), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/264 (11%), Positives = 70/264 (26%)
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
++ + + K +++ + A + I+
Sbjct: 14 TQNTLQSTNSALTKSMEKLSTGFRINSAADDAAGLQIANRLEAQSRGMNVAMRNSQDAIS 73
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
+ A N + + + D+ A +
Sbjct: 74 MMQTAEGAFDEMTNIAYRMNDLAVQYANGTNSTADQTAIDVEFNALSDELANIASNTNFG 133
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ + + + +D+ + + A + + +S
Sbjct: 134 GTNLLTTGSFGAGAVVFQIGTSSTETLSVDASTEVGAVTGHALAAGGGGLSAASNIDALS 193
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
I+ A + G+ +R+ + M + +E GR++D D ASES +S Q
Sbjct: 194 GAGGLIELLGTARAEFGANINRLEHTITNLGNMTENLESSKGRIMDTDFASESGMMSKQQ 253
Query: 427 TQQQLAVQALSIVNNSTARILSLF 450
Q LS +SL
Sbjct: 254 MLMQSGASMLSASKMVPQLAMSLL 277
>gi|87242482|gb|ABD33780.1| flagellin [Bacillus cereus]
Length = 335
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L S+ G S + A + +
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVASNNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++Q E +L+ Q++ IA + FN ++ L D
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTNENKAAMQKEFGELKEQIKYIAENTQFNDQHLLNADK 120
Query: 139 G 139
G
Sbjct: 121 G 121
Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 52/163 (31%)
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ G D+ V+A YTNS K + ++T + K
Sbjct: 173 NATMDRLDATVPGTRDVDVQAAKDAFDKVKGFYTNSDSVKAIERAFEDYATASTAGTAKA 232
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
+ N T ++ ID +K +G+ +R+
Sbjct: 233 DAATAIKAAFDLAANKVGKPATGGAQGSANSLGAITKIDAALKTVADNRATLGATLNRLD 292
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +K ++ ++ DADMA E + ++ + + +
Sbjct: 293 FNVNNLKSQASSMAAAASQVEDADMAKEMSEMTKFKILNEAGI 335
>gi|257866414|ref|ZP_05646067.1| flagellin [Enterococcus casseliflavus EC30]
gi|257873070|ref|ZP_05652723.1| flagellin [Enterococcus casseliflavus EC10]
gi|257876027|ref|ZP_05655680.1| flagellin [Enterococcus casseliflavus EC20]
gi|325567494|ref|ZP_08144161.1| flagellin [Enterococcus casseliflavus ATCC 12755]
gi|257800372|gb|EEV29400.1| flagellin [Enterococcus casseliflavus EC30]
gi|257807234|gb|EEV36056.1| flagellin [Enterococcus casseliflavus EC10]
gi|257810193|gb|EEV39013.1| flagellin [Enterococcus casseliflavus EC20]
gi|325158927|gb|EGC71073.1| flagellin [Enterococcus casseliflavus ATCC 12755]
Length = 360
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 47/139 (33%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T + T T + + A ++ ID IK
Sbjct: 222 TVAELQTAIDTAADDTAKATAQKTYDDALATFTASDEGKAAAATVSVENNPITKIDEAIK 281
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+A +G+ +R+ + + ++ + + R+ D DMA E + Q A
Sbjct: 282 AVSAQRADLGAAQNRLEHTINNLGTTQENLSEANSRIRDVDMAQEMMSFTKSNILSQAAT 341
Query: 434 QALSIVNNSTARILSLFRG 452
L+ N+ +LSL +G
Sbjct: 342 SMLAQANSMPNSVLSLLQG 360
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/272 (13%), Positives = 86/272 (31%), Gaps = 3/272 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN SA++ +L N + ++SSGLR++ A D+AA +I++ MK G LS
Sbjct: 3 INTNVSALNTYSRLTAANASKSNSLSKLSSGLRINKAGDDAAGLAISEKMKGQIGGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + A+ +++ ++ +++ D +I E T L ++
Sbjct: 63 KSNAQDGISLIQTAEGALNETHSILGRMRDLAVQSSNGTLSDDDRSAINKEYTALSDEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + FN ++ L + + + + + +++ + +
Sbjct: 123 RISNTTEFNTKSLLTGEGDDAKSFTFQIGANANQTMSVSINNMSSSALKVKGLDLTQAID 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + + +L T
Sbjct: 183 TSDAKAVAAAKDKAVATAFKADATTKYAADGTVDAAAGKTVAELQTAIDTAADDTAKATA 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
Q + + + + + +
Sbjct: 243 QKTYDDALATFTASDEGKAAAATVSVENNPIT 274
>gi|296126821|ref|YP_003634073.1| flagellin domain protein [Brachyspira murdochii DSM 12563]
gi|296018637|gb|ADG71874.1| flagellin domain protein [Brachyspira murdochii DSM 12563]
Length = 285
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 64/170 (37%), Gaps = 3/170 (1%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ L+ N L +SSGLR++ A D+A+ ++++ M++ L G S
Sbjct: 13 QRTLKFRNVELSKDMAALSSGLRINRAGDDASGLAVSEKMRTQIRGLRQAERNTQDGISF 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ + + ++ D++ I+ D IQ E++QL ++ IA + FN
Sbjct: 73 IQTTEGYLQESQDILQRIRELSVQSANGIYTDADRMLIQVEVSQLVDEVNRIASQAQFNT 132
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
N L + A F N + + + L +
Sbjct: 133 LNMLTGRFANPNEGGAPVASMWFHMGANMDERRRVYIGTMTAAALGLQTP 182
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 34/97 (35%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +D + + +G+ +R+ L + + + R+ D D
Sbjct: 189 ISSIDKANSAIGLVDEALMKVSKQRSNLGAYQNRLELTAQGLMIAYENTAASESRIRDTD 248
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA S + + Q Q + L+ N L L +
Sbjct: 249 MAETSVKFAKDQILSQANLAMLAQANTMNQGALRLIQ 285
>gi|254473291|ref|ZP_05086688.1| flAgellin a protein [Pseudovibrio sp. JE062]
gi|211957407|gb|EEA92610.1| flAgellin a protein [Pseudovibrio sp. JE062]
Length = 386
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 84/203 (41%), Positives = 120/203 (59%), Gaps = 2/203 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+S+LTN SAM A LR IN ++ Q+R+S+G+RV+DA+DNAAYWSIA MKSDN AL
Sbjct: 1 MSSLLTNSSAMVALTTLRGINDSMATTQNRISTGMRVADASDNAAYWSIATTMKSDNSAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV D++GLG++ VD+A M + +D++S IK+K+TA D IQ++I QLQ QL
Sbjct: 61 SAVKDSLGLGAATVDVAFTAMDQTVDIVSQIKDKLTAATNGTVDRGKIQADIEQLQKQLE 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++F+GENWL+ + T ++ K + GSF RD G QI I ++ +
Sbjct: 121 TIASSATFSGENWLQQN--METDALNKEIAGSFTRDAAGNTQIENIVVDTRTTVLVDTRT 178
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
T + +
Sbjct: 179 TGDNTGILTSNLVGDTHGAITMT 201
>gi|111114970|ref|YP_709588.1| flagellin [Borrelia afzelii PKo]
gi|216263827|ref|ZP_03435821.1| p41 [Borrelia afzelii ACA-1]
gi|312973|emb|CAA49307.1| p41 [Borrelia burgdorferi]
gi|483451|emb|CAA49315.1| p41 [Borrelia burgdorferi]
gi|110890244|gb|ABH01412.1| flagellar filament 41 kDa core protein [Borrelia afzelii PKo]
gi|215979871|gb|EEC20693.1| p41 [Borrelia afzelii ACA-1]
gi|227018549|gb|ACP18867.1| flagellin [Borrelia afzelii]
gi|739580|prf||2003376C flagellin
Length = 336
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNAINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVKTAE 149
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 21/208 (10%), Positives = 55/208 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
S + + +
Sbjct: 189 IYSANVANLFAGEGAQAAQAAPVQEGAQEEGAQQPTPATAPTQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+ ++ N +LSL R
Sbjct: 309 TNSILTQSAMAMIAQANQVPQYVLSLLR 336
>gi|435007|emb|CAA53013.1| flagellin [Borrelia afzelii ACA-1]
Length = 336
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNAINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVKTAE 149
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 20/208 (9%), Positives = 55/208 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + +
Sbjct: 189 IYAANVANLFAGEGAQAAQAAPVQEGAQEEGAQQPTPATAPTQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+ ++ N +LSL R
Sbjct: 309 TNSILTQSAMAMIAQANQVPQYVLSLLR 336
>gi|117923384|ref|YP_864001.1| flagellin domain-containing protein [Magnetococcus sp. MC-1]
gi|117607140|gb|ABK42595.1| flagellin domain protein [Magnetococcus sp. MC-1]
Length = 271
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN ++++A +KL + L +R+SSG R++ AAD+AA +++ M + L+
Sbjct: 5 VNTNVASLNAQRKLNNSTNALSKTYERLSSGFRINGAADDAAGLTVSTRMTAQIRGLNQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S V +++ +++ + ++ TD + E+TQL S++
Sbjct: 65 ARNANDGISLVQVSEGALAETEAALQRMRELAVQAASGTYTNTDRSDLNDELTQLVSEIT 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FNG L A + I + L +
Sbjct: 125 RIATETKFNGMVTLSATQTFDIQVGADAGQKITINTTAAGASALGVTAASITSAGLASA 183
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 36/96 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ ID I + +G+ +R+ + + + + R++DAD
Sbjct: 175 ITSAGLASAAITKIDAAIASVSDMRSVLGAQQNRLEAAIANLTNVSERTQAARSRIMDAD 234
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+A E+ L+ QQ L+ N LSL
Sbjct: 235 IAQETAALTRNAILQQAGTAILAQANQQPQLALSLL 270
>gi|241666531|ref|YP_002984615.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240861988|gb|ACS59653.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 302
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 84/146 (57%), Positives = 104/146 (71%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN+SAMSA Q LR IN NLE Q+ VS+G RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNNSAMSALQTLRSINSNLETTQNSVSTGYRVDTASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A M AIDV+ IK+K+ A E G D +Q EITQLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYTAMENAIDVVDEIKSKLVAATEDGVDKSKVQEEITQLQEQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA+ +SF+GENW+ + G+ + +
Sbjct: 121 SIAQSASFSGENWVAGESGTKSVVSS 146
Score = 92.9 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 54/137 (39%), Positives = 79/137 (57%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
S + ++ + ++ ++ +S I++ +
Sbjct: 165 DTSSTGNVLFGMSSGTIDTASGILGTVDANGDSVYSLDITDFTTGQIQSALSTIESALSA 224
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
T+A ++GSIS+RI LQEDF+ + D++E GVGRLVDADM ES+RLSALQTQQQLA+Q
Sbjct: 225 MTSAGAQLGSISTRIELQEDFVGALSDSIESGVGRLVDADMEEESSRLSALQTQQQLAIQ 284
Query: 435 ALSIVNNSTARILSLFR 451
+LSI N+S+ ILSLFR
Sbjct: 285 SLSIANSSSQNILSLFR 301
>gi|170731578|ref|YP_001763525.1| flagellin [Burkholderia cenocepacia MC0-3]
gi|169814820|gb|ACA89403.1| flagellin domain protein [Burkholderia cenocepacia MC0-3]
Length = 389
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 50/295 (16%), Positives = 103/295 (34%), Gaps = 3/295 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +I+ M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQNALSQAITRLSSGKRINSAADDAAGLAISTRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ G S + A + +S + + I+ TD ++Q E+ Q
Sbjct: 61 NQGVSNANDGVSMIQTASSALSSLTNSLQRIRQLAVQASTGTMSTTDQAALQQEVAQQIQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG N L + G + + +V + D + + I L + +
Sbjct: 121 EVNRIASQTTYNGTNILNGNAGIVSFQVGANVGQTISLDLSQSMSAAQIGGGLVQKGQTV 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ T + + V + + + T T + +
Sbjct: 181 GTVTGLSLDSSGAYTSAAAAVTVTAINVLSDGKGGYTFTDQNGGAISQTYAQSVFGTNAT 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT 292
A A + + ++ + + +VA + +T
Sbjct: 241 GGTGAAVGALTLQTSATSVGGSSMSAAALTAATNAVAQINAVNKPATVSGLDIST 295
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/386 (10%), Positives = 107/386 (27%), Gaps = 5/386 (1%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ ++ ++ +S+AI +S+ K + D + + T++Q+Q+ + +G
Sbjct: 9 NSLVAQQNLNGSQNALSQAITRLSSGK-----RINSAADDAAGLAISTRMQTQINGLNQG 63
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + SS S + + + T +
Sbjct: 64 VSNANDGVSMIQTASSALSSLTNSLQRIRQLAVQASTGTMSTTDQAALQQEVAQQIQEVN 123
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
R + + + V G + + ++ +
Sbjct: 124 RIASQTTYNGTNILNGNAGIVSFQVGANVGQTISLDLSQSMSAAQIGGGLVQKGQTVGTV 183
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
+ + A + + S N + ++ ++
Sbjct: 184 TGLSLDSSGAYTSAAAAVTVTAINVLSDGKGGYTFTDQNGGAISQTYAQSVFGTNATGGT 243
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + S L ++ + +N + + +
Sbjct: 244 GAAVGALTLQTSATSVGGSSMSAAALTAATNAVAQINAVNKPATVSGLDISTVSGANVAM 303
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID ++ +G+ +R + + ++ DA+ A E+ +S
Sbjct: 304 VSIDNALQTVNNVQAALGAAQNRFTAIATAQQAESTDLSSAQSQITDANFAQETANMSKN 363
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ + L+ N+ ++L L +
Sbjct: 364 QVLQQAGISVLAQANSLPQQVLKLLQ 389
>gi|95930541|ref|ZP_01313276.1| flagellin-like [Desulfuromonas acetoxidans DSM 684]
gi|95133376|gb|EAT15040.1| flagellin-like [Desulfuromonas acetoxidans DSM 684]
Length = 272
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
T + +S+ L NL +R+SSGLR++ A D+AA +I+ + ++
Sbjct: 3 NTINGPSLSSRNLVQSQQNLNKSMERISSGLRINSAQDDAAGLAISDRFNAQVRGINQAI 62
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRD 121
G S A + ++ ++ ++ +D S+ +E +QLQS+L
Sbjct: 63 RNANDGYSLAQTADGALGESTTLLQRMRELAVQSANGIYNDSDRASMNAEFSQLQSELDR 122
Query: 122 IARGSSFNGENWLRTD 137
IA +SFNG+N L D
Sbjct: 123 IAGTTSFNGQNLLNGD 138
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/235 (13%), Positives = 67/235 (28%)
Query: 218 STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASA 277
+ S + + A A ++ SA
Sbjct: 38 AQDDAAGLAISDRFNAQVRGINQAIRNANDGYSLAQTADGALGESTTLLQRMRELAVQSA 97
Query: 278 TYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
I + + A + +T N ES E +
Sbjct: 98 NGIYNDSDRASMNAEFSQLQSELDRIAGTTSFNGQNLLNGDLAESGMTFQVSADAGEQIT 157
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
+ + ++ ID + + + G++G+I +R + +
Sbjct: 158 VQVDGASQQDLGTTELNVLSQSGAQSSLAAIDEALTRVSGSRGELGAIQNRFESAIENLG 217
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + + R+ DADMA E + ++ + +Q + + N S +L L +G
Sbjct: 218 DIAENMTAANSRIADADMAEEVSAMTRNRILEQAGISMQAQANQSAKTVLGLLQG 272
>gi|117923386|ref|YP_864003.1| flagellin domain-containing protein [Magnetococcus sp. MC-1]
gi|117923387|ref|YP_864004.1| flagellin domain-containing protein [Magnetococcus sp. MC-1]
gi|117607142|gb|ABK42597.1| flagellin domain protein [Magnetococcus sp. MC-1]
gi|117607143|gb|ABK42598.1| flagellin domain protein [Magnetococcus sp. MC-1]
Length = 271
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 3/179 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI+TN +++ A +KL L +R+SSGLR++ AAD+AA +I+ M + L+
Sbjct: 4 SIITNVASLQAQRKLSGTTNALSQTYERLSSGLRINGAADDAAGLTISTRMTAQIRGLNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
S G S V + + + + + ++ TD + E+TQL +++
Sbjct: 64 ASRNANDGISLVQVTEGALQETEAALQRMRELAVQASSATYTNTDRADLNDELTQLVTEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
IA + FNG L A + + + L
Sbjct: 124 TRIATETKFNGMVMLSATQTYDIQVGADAGQKITVSTTAAGASALGVTAASITSAGLAS 182
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ID I + +GS +R+ + + + + R++DAD
Sbjct: 175 ITSAGLASIAIGKIDAAIASVSDMRSVLGSQQNRLEAAIANLDNVSERTQAARSRIMDAD 234
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+A E+ L+ QQ L+ N +LSL R
Sbjct: 235 IAQETANLTKQSILQQAGAAMLAQANQQPQLMLSLLR 271
>gi|187918025|ref|YP_001883588.1| flagellin [Borrelia hermsii DAH]
gi|39492|emb|CAA37884.1| flagellin sub-unit protein [Borrelia hermsii]
gi|143996|gb|AAA22937.1| flagellin [Borrelia hermsii]
gi|51317788|gb|AAU00015.1| flagellin [Borrelia hermsii DAH]
gi|51317790|gb|AAU00016.1| flagellin [Borrelia hermsii]
gi|51317792|gb|AAU00017.1| flagellin [Borrelia hermsii]
gi|51317794|gb|AAU00018.1| flagellin [Borrelia hermsii]
gi|51317796|gb|AAU00019.1| flagellin [Borrelia hermsii]
gi|51317798|gb|AAU00020.1| flagellin [Borrelia hermsii]
gi|51317800|gb|AAU00021.1| flagellin [Borrelia hermsii]
gi|51317802|gb|AAU00022.1| flagellin [Borrelia hermsii]
gi|51317804|gb|AAU00023.1| flagellin [Borrelia hermsii]
gi|51317806|gb|AAU00024.1| flagellin [Borrelia hermsii]
gi|51317808|gb|AAU00025.1| flagellin [Borrelia hermsii]
gi|51317810|gb|AAU00026.1| flagellin [Borrelia hermsii]
gi|51317812|gb|AAU00027.1| flagellin [Borrelia hermsii]
gi|51317814|gb|AAU00028.1| flagellin [Borrelia hermsii]
gi|51317822|gb|AAU00032.1| flagellin [Borrelia hermsii]
gi|112031332|gb|ABH88150.1| FlaB [Borrelia hermsii]
gi|112031336|gb|ABH88152.1| FlaB [Borrelia hermsii]
gi|119860873|gb|AAX16668.1| flagellin [Borrelia hermsii DAH]
Length = 334
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNSINATNLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVERVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSAAQNVKTAE 149
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 53/169 (31%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G+ W + + N + V N ++ + + +
Sbjct: 166 GSQASWTLRVHVGANQDEAIAVNIYASNVANLFAGEGAQAAPVQEIGQQEEGQAAPAPAA 225
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + ++ I+ I+ + +G+ +R+ +D + +
Sbjct: 226 APAQGGVNSPINVTTAVDANMSLAKIEGAIRMVSDQRANLGAFQNRLESIKDSTEYAIEN 285
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ ++ DA M E + Q A+ ++ N +LSL R
Sbjct: 286 LKASYAQIKDATMTDEVVASTTHSILTQSAMAMIAQANQVPQYVLSLLR 334
>gi|90418381|ref|ZP_01226293.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1]
gi|90338053|gb|EAS51704.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1]
Length = 297
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 88/276 (31%), Positives = 123/276 (44%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN SAM+A Q L IN +L+ Q+R+S+G RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNTSAMTALQSLSAINNSLDETQNRISTGYRVGAASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV DA+GLG +KVD A GM+ AIDV+ IK K+ A E G D IQSEI +LQ QL
Sbjct: 61 GAVEDALGLGQAKVDTAYTGMTAAIDVVDEIKTKLVAAREPGVDKTKIQSEIKELQGQLT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SF+GENWL G + + + D V +D +++
Sbjct: 121 SIASSASFSGENWLSIGTGIAAGTKNVVASFNRAADGTVSVGTIGVDTTKTKLFDTDNTN 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + ++ A+ GA + +
Sbjct: 181 GILDGARTGTTVVSTLALTGATTDAAISTMISDVDEAIGLMTTAASNLGAAKSRMDIQSE 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ + T ++ K+
Sbjct: 241 FVSNLRDSIEKGVGTLVDADMTEESTRLKALQTQQQ 276
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 61/284 (21%), Positives = 89/284 (31%)
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
T G + S A G
Sbjct: 3 SINTNTSAMTALQSLSAINNSLDETQNRISTGYRVGAASDNAAYWSIATTMRSDNKALGA 62
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ A D I T V + +
Sbjct: 63 VEDALGLGQAKVDTAYTGMTAAIDVVDEIKTKLVAAREPGVDKTKIQSEIKELQGQLTSI 122
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
A+ + T + T + + + A + + ++T
Sbjct: 123 ASSASFSGENWLSIGTGIAAGTKNVVASFNRAADGTVSVGTIGVDTTKTKLFDTDNTNGI 182
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + A+ M+S +D I T AA +G+ SR+ +Q +F+
Sbjct: 183 LDGARTGTTVVSTLALTGATTDAAISTMISDVDEAIGLMTTAASNLGAAKSRMDIQSEFV 242
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
+RD++EKGVG LVDADM ESTRL ALQTQQQL VQALSI N
Sbjct: 243 SNLRDSIEKGVGTLVDADMTEESTRLKALQTQQQLGVQALSIAN 286
>gi|296502358|ref|YP_003664058.1| flagellin [Bacillus thuringiensis BMB171]
gi|296323410|gb|ADH06338.1| flagellin [Bacillus thuringiensis BMB171]
Length = 266
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 61/177 (34%), Gaps = 3/177 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A+DN A +I M + +
Sbjct: 3 IGTNILSMNARQSLYENEKRMNVSMEHLATGKKLNHASDNPANIAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ +E L Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSTNGTNSNKNRDSLNTEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
I+ + FN + T + Q + +
Sbjct: 123 YISETTEFNDLSVFDGQNRPITLDDISHTVHMTKHIPPSPTQHDIKISTEQEASAAI 179
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/242 (11%), Positives = 71/242 (29%)
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ KK A+ + A + +A G+ A + T +
Sbjct: 23 MNVSMEHLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQT 82
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + + + T T T + + +
Sbjct: 83 VTNILQRMRDLAVQSTNGTNSNKNRDSLNTEFQSLTEQIGYISETTEFNDLSVFDGQNRP 142
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
L + + + + + + + + I+ ++ + +GS+ +R
Sbjct: 143 ITLDDISHTVHMTKHIPPSPTQHDIKISTEQEASAAILKIEEALQNVSLHRADLGSMINR 202
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + A+ V ++ DADMA E + + ++A+ +S N +
Sbjct: 203 LQFNIENLNSQSMALTDAVSQVEDADMAQEISDFLKFRLLTEVALSMVSQANQIPQMVSK 262
Query: 449 LF 450
L
Sbjct: 263 LL 264
>gi|903608|gb|AAB03520.1| flagellin [Borrelia hispanica]
Length = 334
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 3/132 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNAINVANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + + + + + V +K D S QSE QL +L
Sbjct: 63 SRNTSKAINFIQTTEGNLDEVEKVSVRMKELAVQSGGGTYSDADRGSTQSEDEQLTDELN 122
Query: 121 DIARGSSFNGEN 132
IA + +N +
Sbjct: 123 RIADQAXYNHIH 134
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 11/133 (8%), Positives = 35/133 (26%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + + + ++ I+ I+
Sbjct: 199 SGEGAQQVAPAQEGAQQEGGQAAPPPAAAPTQGGVNSPVNVTTAVDANVSLTKIEDAIRM 258
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G+ +R + + + +E ++ DA M + + Q A+
Sbjct: 259 VADQRANLGAFQNRRESIKASTEYAIENLEASYAQIRDAAMTDDIVASTTNSILTQSAMA 318
Query: 435 ALSIVNNSTARIL 447
++ + +L
Sbjct: 319 MIAQADQVPQYVL 331
>gi|30019802|ref|NP_831433.1| flagellin [Bacillus cereus ATCC 14579]
gi|29895347|gb|AAP08634.1| Flagellin [Bacillus cereus ATCC 14579]
Length = 266
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 61/177 (34%), Gaps = 3/177 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A+DN A +I M + +
Sbjct: 3 IGTNILSMNARQSLYENEKRMNVSMEHLATGKKLNHASDNPANIAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ +E L Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSTNGTNSNKNRDSLNTEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
I+ + FN + T + Q + +
Sbjct: 123 YISETTEFNDLSVFDGQNRPITLDDISHTVHMTKHIPPSPTQHDIKISTEQEASAAI 179
Score = 86.7 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 27/242 (11%), Positives = 70/242 (28%)
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ KK A+ + A + +A G+ A + T +
Sbjct: 23 MNVSMEHLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQT 82
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + + + T T T + + +
Sbjct: 83 VTNILQRMRDLAVQSTNGTNSNKNRDSLNTEFQSLTEQIGYISETTEFNDLSVFDGQNRP 142
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
L + + + + + + + + I+ ++ + +GS+ +R
Sbjct: 143 ITLDDISHTVHMTKHIPPSPTQHDIKISTEQEASAAILKIEEALQNVSLHRADLGSMINR 202
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + A+ V ++ DADMA E + + ++ + +S N +
Sbjct: 203 LQFNIENLNSQSMALTDAVSQVEDADMAQEISDFLKFRLLTEVTLSMVSQANQIPQMVSK 262
Query: 449 LF 450
L
Sbjct: 263 LL 264
>gi|483589|emb|CAA49318.1| p41 [Borrelia burgdorferi]
Length = 336
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVRTAE 149
Score = 82.9 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 31/307 (10%), Positives = 80/307 (26%), Gaps = 1/307 (0%)
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ I D G I+ + + +++ + N + V
Sbjct: 31 SSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRM 90
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ + N DQA+ + +A T
Sbjct: 91 KELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSASQNVRTAEE 150
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ ++ + + V + VA + + ++
Sbjct: 151 LGMQPAKINTPASLSGSQASWTLGVHVGANQDEAIAVNIYAANVANLFSGEGAQAAQTAP 210
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+ + + + ++ I+ I+ + +G+
Sbjct: 211 VQEGVQQEGAQQPAPATAPS-QGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGA 269
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
+R+ +D + + ++ ++ DA M E + Q A+ ++ N
Sbjct: 270 FQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSAMAMIAQANQVPQ 329
Query: 445 RILSLFR 451
+LSL R
Sbjct: 330 YVLSLLR 336
>gi|51317816|gb|AAU00029.1| flagellin [Borrelia hermsii]
gi|51317818|gb|AAU00030.1| flagellin [Borrelia hermsii]
gi|51317820|gb|AAU00031.1| flagellin [Borrelia hermsii]
gi|112031328|gb|ABH88148.1| FlaB [Borrelia hermsii]
Length = 334
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNSINATNLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVERVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSAAQNVKTAE 149
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 22/169 (13%), Positives = 53/169 (31%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G+ W + + N + V N ++ + + +
Sbjct: 166 GSQASWTLRVHVGANQDEAIAVNIYASNVANLFAGEGAQAAPVQEIGQQEEGQAAPAPAA 225
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + ++ I+ I+ T +G+ +R+ +D + +
Sbjct: 226 APAQGGVNSPINVTTAVDANMSLAKIEGAIRMVTDQRANLGAFQNRLESIKDSTEYAIEN 285
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ ++ DA M E + Q A+ ++ N +LSL R
Sbjct: 286 LKASYAQIKDATMTDEVVASTTHSILTQSAMAMIAQANQVPQYVLSLLR 334
>gi|153840355|ref|ZP_01993022.1| polar flagellin B/D [Vibrio parahaemolyticus AQ3810]
gi|149745980|gb|EDM57110.1| polar flagellin B/D [Vibrio parahaemolyticus AQ3810]
Length = 221
Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 41/107 (38%)
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
+T +E V+ ID +K + ++G+ +R + + + + V
Sbjct: 114 DKKNVTVDTIDVTSVGGAQESVAIIDAALKYVDSHRAELGAFQNRFNHAISNLDNINENV 173
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R+ D D A E+T ++ Q Q + L+ + LSL
Sbjct: 174 NASKSRIKDTDFAKETTAMTKSQILSQASSSILAQAKQAPNSALSLL 220
>gi|114054805|gb|ABI50003.1| FlaA [Clostridium botulinum]
Length = 254
Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 26 VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAI 85
+++SSGLR++ A D+AA +I++ M+ L+ S S + A+ +++
Sbjct: 6 KAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQASRNSQDAISLIQTAEGALNETH 65
Query: 86 DVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSST 142
++ ++ D +++Q E+ +LQS++ I+ + FN ++ + +
Sbjct: 66 SILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEINRISSQTQFNTKSLINGAVSEDA 125
Query: 143 ASIA 146
++
Sbjct: 126 KAMT 129
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 46/131 (35%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D ++ T + + I + + + + + ++ ID I +
Sbjct: 124 DAKAMTFQIGANSGQTIKLTIGSMDAKTLKVDKIKLDDTAANVTKQIATIDNAINSVSKE 183
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
K+G+ +R+ + + ++ R+ D DMA E + Q A L+
Sbjct: 184 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAMLAQ 243
Query: 439 VNNSTARILSL 449
N + +L L
Sbjct: 244 ANQAPQGVLQL 254
>gi|229058408|ref|ZP_04196792.1| Flagellin [Bacillus cereus AH603]
gi|228719917|gb|EEL71507.1| Flagellin [Bacillus cereus AH603]
Length = 266
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 59/169 (34%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V +R+++G +++DA+DN A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMERLATGKKLNDASDNPANIAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSANGTNLNKNRDSLNKEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T I Q
Sbjct: 123 YIGETTEFNDSSVFDGQNRPITLDDIGHTIDITKHIPPSPTQHDIKIST 171
Score = 95.6 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 70/239 (29%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T + +
Sbjct: 27 MERLATGKKLNDASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNI 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + + T T + + + L
Sbjct: 87 LQRMRDLAVQSANGTNLNKNRDSLNKEFQSLTEQIGYIGETTEFNDSSVFDGQNRPITLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + I+ ++ + +G++ +R+
Sbjct: 147 DIGHTIDITKHIPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGAMLNRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 207 MENLNSQSTALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSKLLQ 265
>gi|254457089|ref|ZP_05070517.1| flagellin B [Campylobacterales bacterium GD 1]
gi|207085881|gb|EDZ63165.1| flagellin B [Campylobacterales bacterium GD 1]
Length = 280
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 62/160 (38%), Gaps = 3/160 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN AM+A + N L+ + +SSGLR++ AAD++A +IA + + + L
Sbjct: 5 INTNIGAMNAHRNATMNNVGLDKSLNSLSSGLRINKAADDSAGLAIANKLSAQSQGLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
G + A + + ++ ++ D I E+ L +
Sbjct: 65 VRNSNDGIGLLQTADGALEEYGQILKRVRVLAVQASNDTQDATSRGYISQEVQALLGEAN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
DIA + FNG L G+ G++ +
Sbjct: 125 DIATTTKFNGVGVLNGTGGAGADGTFIFHTGAYTTETQST 164
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 45/129 (34%)
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKI 382
+ + + V ++ A T A + E + +D ++ A I
Sbjct: 152 FHTGAYTTETQSTVIASATVAEILSAAATTVAVTTRGDAEASILKMDNAMQKIDAKRATI 211
Query: 383 GSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNS 442
G+ +++ I + + + ++ D D A+ES + Q A+S N
Sbjct: 212 GAAQNKLESTVRNISVTQVNIAAAESQIRDVDFAAESANFAKHNILAQSGSYAMSQANAV 271
Query: 443 TARILSLFR 451
+L L +
Sbjct: 272 QQNVLRLLQ 280
>gi|46934828|emb|CAF74791.1| flagellin gene flaC [Magnetospirillum gryphiswaldense MSR-1]
gi|144898359|emb|CAM75223.1| Flagellin and related hook-associated protein [Magnetospirillum
gryphiswaldense MSR-1]
Length = 410
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 73/444 (16%), Positives = 140/444 (31%), Gaps = 48/444 (10%)
Query: 12 SASQKLRDINYNLE---VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
+ Q L I Q R+++GL+V+ D+A + + + L D I
Sbjct: 10 TTRQNLGSIQSTEALRGRTQSRLATGLKVASVIDDAIAYFQGRALGDRAMGLLETKDGIA 69
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSE--ITQLQSQLRDIARGS 126
G + A G+S D++ +K A + Q +L+ QL +A +
Sbjct: 70 GGIGSIKAAMEGLSGIEDIIVQMKGLALAAKSEASQITRHQLYRQYGELREQLDAVANDA 129
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
FNG N + + ++ + + V I L P+TV + +++ G +
Sbjct: 130 HFNGMNLIGNPAANVQVRLSPLGAEPVSKLEIMGVTINAASLGLAPQTVDISAASYGGDA 189
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+ + S ++ A + G + +
Sbjct: 190 AVKARFDAWAASMISMTNSGAGSAVATETVVTGIGALKALSPGGSVALVSDADGVMSMDG 249
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
V +A A G + +G+ TT N
Sbjct: 250 EDAVNPVSADAQYRAVVALQGYMTSGGNPGDEVHDLGSGLSDGAFTTGNYPGVTVSLHEY 309
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ +D +S
Sbjct: 310 PWESQDHYLDNIDFH-------------------------------------------IS 326
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+D + + ++G + + +++ F + + D +G G+LV+AD+ E + ALQ
Sbjct: 327 ALDVALTTVRSTMAEMGGNIALLQVRDSFAQNLADIAREGAGKLVNADLNEEGANMVALQ 386
Query: 427 TQQQLAVQALSIVNNSTARILSLF 450
T+ QL +QALS + +L LF
Sbjct: 387 TRSQLGLQALSFAGKADQAVLGLF 410
>gi|238925596|ref|YP_002939113.1| flagellin and related hook-associated protein [Eubacterium rectale
ATCC 33656]
gi|238877272|gb|ACR76979.1| flagellin and related hook-associated protein [Eubacterium rectale
ATCC 33656]
Length = 270
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 44/258 (17%), Positives = 92/258 (35%), Gaps = 3/258 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N +A +A+++L L +++SSG R++ AAD+AA SI++ M+S L+
Sbjct: 2 VVQHNMAASNANRQLGISTNTLSKSTEKLSSGYRINRAADDAAGLSISEKMRSQIRGLNK 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
S G S + A+ +++A ++ + T D ++QSE+ L ++L
Sbjct: 62 ASSNAQDGISAIQTAEGALNEAHSILQRMNELATQSANDTNTTADRTAVQSEVNALTNEL 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA S FN +N L + LD ++
Sbjct: 122 SRIASTSQFNTQNLLDGTFTGKNLQVGALENQKITISIGTMNAKALGVGSLDVKSFTKAG 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + + + + ++ +V + + + + + +
Sbjct: 182 SAMTLIQKAISKVSGQRSDLGALQNRLEHTVNNLDNISENTQTAESRIRDTDMASEMVQY 241
Query: 240 DQAKGIATIPVPLPAAPA 257
I + A
Sbjct: 242 SATSIIQQAGQSMLAQAN 259
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 40/89 (44%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
++ I I + +G++ +R+ + + + + + R+ D DMASE +
Sbjct: 182 SAMTLIQKAISKVSGQRSDLGALQNRLEHTVNNLDNISENTQTAESRIRDTDMASEMVQY 241
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
SA QQ L+ N+ T +LSL +
Sbjct: 242 SATSIIQQAGQSMLAQANSQTQGVLSLIQ 270
>gi|219684801|ref|ZP_03539743.1| p41 [Borrelia garinii PBr]
gi|219685891|ref|ZP_03540696.1| hypothetical protein BGAFAR04_0153 [Borrelia garinii Far04]
gi|858713|gb|AAB36994.1| flagellin [Borrelia burgdorferi]
gi|858726|gb|AAB37005.1| flagellin [Borrelia burgdorferi]
gi|219671746|gb|EED28801.1| p41 [Borrelia garinii PBr]
gi|219672559|gb|EED29593.1| hypothetical protein BGAFAR04_0153 [Borrelia garinii Far04]
Length = 336
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVRTAE 149
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/208 (10%), Positives = 58/208 (27%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 189 IYAANVANLFSGEGAQAAQTAPVQEGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+ ++ N +LSL R
Sbjct: 309 TNSILTQSAMAMIAQANQVPQYVLSLLR 336
>gi|434920|emb|CAA53014.1| flagellin [Borrelia garinii]
gi|858733|gb|AAB37010.1| flagellin [Borrelia garinii]
Length = 336
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVRTAE 149
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/208 (10%), Positives = 59/208 (28%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + + +
Sbjct: 189 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPAPVTAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+ ++ N +LSL R
Sbjct: 309 TNSILTQSAMAMIAQANQVPQYVLSLLR 336
>gi|195941881|ref|ZP_03087263.1| flagellin [Borrelia burgdorferi 80a]
gi|216264352|ref|ZP_03436344.1| p41 [Borrelia burgdorferi 156a]
gi|218249451|ref|YP_002374675.1| p41 [Borrelia burgdorferi ZS7]
gi|221217370|ref|ZP_03588841.1| hypothetical protein BBU72A_0150 [Borrelia burgdorferi 72a]
gi|224532796|ref|ZP_03673412.1| hypothetical protein BBUWI9123_0159 [Borrelia burgdorferi WI91-23]
gi|224534004|ref|ZP_03674588.1| Flagella basal body rod protein [Borrelia burgdorferi CA-11.2a]
gi|225549856|ref|ZP_03770818.1| Flagella basal body rod protein [Borrelia burgdorferi 118a]
gi|226320661|ref|ZP_03796219.1| Flagella basal body rod protein [Borrelia burgdorferi 29805]
gi|226321942|ref|ZP_03797467.1| Flagella basal body rod protein [Borrelia burgdorferi Bol26]
gi|120230|sp|P11089|FLA1_BORBU RecName: Full=Flagellar filament 41 kDa core protein;
Short=Flagellin; AltName: Full=41 kDa antigen; AltName:
Full=P41
gi|39359|emb|CAA33695.1| unnamed protein product [Borrelia burgdorferi]
gi|289000|emb|CAA39770.1| fla [Borrelia burgdorferi]
gi|215980825|gb|EEC21632.1| p41 [Borrelia burgdorferi 156a]
gi|218164639|gb|ACK74700.1| p41 [Borrelia burgdorferi ZS7]
gi|221192648|gb|EEE18864.1| hypothetical protein BBU72A_0150 [Borrelia burgdorferi 72a]
gi|224512284|gb|EEF82669.1| hypothetical protein BBUWI9123_0159 [Borrelia burgdorferi WI91-23]
gi|224512840|gb|EEF83207.1| Flagella basal body rod protein [Borrelia burgdorferi CA-11.2a]
gi|225369547|gb|EEG98998.1| Flagella basal body rod protein [Borrelia burgdorferi 118a]
gi|226232532|gb|EEH31286.1| Flagella basal body rod protein [Borrelia burgdorferi Bol26]
gi|226233877|gb|EEH32600.1| Flagella basal body rod protein [Borrelia burgdorferi 29805]
gi|312149467|gb|ADQ29538.1| Flagellin protein [Borrelia burgdorferi N40]
Length = 336
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVRTAE 149
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/307 (10%), Positives = 80/307 (26%), Gaps = 1/307 (0%)
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ I D G I+ + + +++ + N + V
Sbjct: 31 SSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRM 90
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ + N DQA+ + +A T
Sbjct: 91 KELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSASQNVRTAEE 150
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ ++ + + V + VA + + ++
Sbjct: 151 LGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVANLFSGEGAQTAQAAP 210
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+ + + + ++ I+ I+ + +G+
Sbjct: 211 VQEGVQQEGAQQPAPATAPS-QGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGA 269
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
+R+ +D + + ++ ++ DA M E + Q A+ ++ N
Sbjct: 270 FQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSAMAMIAQANQVPQ 329
Query: 445 RILSLFR 451
+LSL R
Sbjct: 330 YVLSLLR 336
>gi|323700158|ref|ZP_08112070.1| flagellin domain protein [Desulfovibrio sp. ND132]
gi|323460090|gb|EGB15955.1| flagellin domain protein [Desulfovibrio desulfuricans ND132]
Length = 308
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 3/141 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N AM+A + L + L V R+SSGLRV AAD+AA +I ++M+S+ +L
Sbjct: 3 LVINHNLMAMNAQRNLSEHYSRLGVSTRRLSSGLRVGTAADDAAGLAIRELMRSEISSLH 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K I SE + S+
Sbjct: 63 QGIRNASDAISLIQTADGALQVVDEKLIRLKELAMQASTGTYNSDQRMIIDSEYQAMCSE 122
Query: 119 LRDIARGSSFNGENWLRTDLG 139
+ IA + FNG L +L
Sbjct: 123 ITRIANATDFNGIYLLNGNLS 143
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 40/104 (38%)
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
+ + + + + I+ I +GS+ +R+ +++ + ++
Sbjct: 205 MNAGKSISTQALAQAAMEAINQAIISKDKIRANLGSMQNRLENTITNLEIQAENLQAAES 264
Query: 409 RLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
R+ D D+A E T Q Q AV L+ N+ + L G
Sbjct: 265 RISDVDVAQEMTEFVRNQILTQSAVAMLAQANSLPRMAMQLIGG 308
>gi|229115200|ref|ZP_04244610.1| Flagellin [Bacillus cereus Rock1-3]
gi|228668340|gb|EEL23772.1| Flagellin [Bacillus cereus Rock1-3]
Length = 350
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 59/138 (42%), Gaps = 3/138 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R+++A+D+AA +IA M++ L ++ G
Sbjct: 1 MRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + A + M+ +++ +++ + ++ E L+ Q+ I+ +
Sbjct: 61 ISLIRTADSAMNSVSNILLRMRDLANQSANGTNTSENQAALDKEFGALKEQINYISTNTE 120
Query: 128 FNGENWLRTDLGSSTASI 145
FN + L +
Sbjct: 121 FNDKKLLDGSNETIAIQT 138
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 40/95 (42%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
V+ ID+ ++ + +G+ +R+ + +K ++ ++ DADMA
Sbjct: 256 TVANPNAAVAAIDSALENIASNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMA 315
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + ++ + + + LS N + + L +
Sbjct: 316 KEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 350
>gi|312971|emb|CAA49308.1| p41 protein [Borrelia burgdorferi]
gi|739581|prf||2003376D flagellin
Length = 336
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNSINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNPSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVRTAE 149
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/208 (10%), Positives = 57/208 (27%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 189 IYAANVANLFSGEGSQAAQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ +D + + ++ + DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYASIKDATMTDEVVAST 308
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+ ++ N +LSL R
Sbjct: 309 TNSILTQSAMAMIAQANQVPQYVLSLLR 336
>gi|304407690|ref|ZP_07389341.1| flagellin domain protein [Paenibacillus curdlanolyticus YK9]
gi|304343173|gb|EFM09016.1| flagellin domain protein [Paenibacillus curdlanolyticus YK9]
Length = 267
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 45/256 (17%), Positives = 98/256 (38%), Gaps = 3/256 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM++ + L N +++SSG R++ AAD+AA SI++ M++ +++
Sbjct: 3 INHNLNAMNSHRNLVLNNIQQGKSSEKLSSGYRINRAADDAAGLSISEKMRAQIKSMNQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQLR 120
G S V A+ M++ D+++ +K +S ++ SE +L + +
Sbjct: 63 MRNAQDGISMVQAAEGAMNEVSDMLTRMKELSVQAANGTYNSTDIAAMDSEYQKLNTAIS 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
DIA FNG L + + + + N + + D + + +
Sbjct: 123 DIATNFQFNGITLLGGASNVTIQTGGGAADQVVVDFTNANISSLGLTGLTDNAQAVTEGA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + + L+ + +V + + + ++ T A F+
Sbjct: 183 LIDTAIETVNTARSTLGAFQNQLEHVYNNVGVNAENLQAAESRIRDTDMAAEMMKYTKFN 242
Query: 241 QAKGIATIPVPLPAAP 256
+ +T +
Sbjct: 243 ILQQASTAMLAQANQA 258
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 40/86 (46%)
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ IDT I+ A +G+ +++ + + + + ++ R+ D DMA+E + +
Sbjct: 182 ALIDTAIETVNTARSTLGAFQNQLEHVYNNVGVNAENLQAAESRIRDTDMAAEMMKYTKF 241
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
QQ + L+ N + +L L R
Sbjct: 242 NILQQASTAMLAQANQAPQGVLQLLR 267
>gi|157101679|gb|ABV23548.1| flagellin C [Bacillus thuringiensis serovar alesti]
Length = 266
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 59/169 (34%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G ++++A+DN A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNNASDNPANIAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L ++
Sbjct: 63 IRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSSNGTNSNENRNSLNKEFQSLTEEIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T + Q T
Sbjct: 123 YIVETTEFNDLSVFDGQNRPITLDDIGHTVHMTKHIPPSPTQHDTKIST 171
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 27/239 (11%), Positives = 72/239 (30%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T + +
Sbjct: 27 MEHLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNI 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ ++ + T V T + + + L
Sbjct: 87 LQRMRDLAVQSSNGTNSNENRNSLNKEFQSLTEEIGYIVETTEFNDLSVFDGQNRPITLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + + I+ ++ + +G++ +R+
Sbjct: 147 DIGHTVHMTKHIPPSPTQHDTKISTEQEARAAILKIEDALQSVSLHRADLGAMINRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 207 IENLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSKLLQ 265
>gi|87242496|gb|ABD33787.1| flagellin [Bacillus weihenstephanensis]
Length = 239
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 71/184 (38%), Gaps = 3/184 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ +R+SSG R++ AAD+AA +IA M++ L S G S + A + +
Sbjct: 1 DKMNTSMNRLSSGKRINSAADDAAGLAIATRMRAKENGLGVASRNTQGGISLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ G D + E QL+ Q+ IA+ ++FNG+ L
Sbjct: 61 NSVSNILLRMRDLAVQSANGTNSGDDRTATNKEFGQLKEQIDYIAKNTAFNGKTLLDGSA 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
S + G+ + T +D ++D + + + +
Sbjct: 121 SSKVSIKTYDDGGADDIEIKLTNVQQTALTGDSKTLKAIDVTSDANAKDAIKAIDGMVNS 180
Query: 199 EPQV 202
Sbjct: 181 IASS 184
Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 32/79 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ + ID + ++ ++G+ +R+ + ++ ++ DAD
Sbjct: 161 VTSDANAKDAIKAIDGMVNSIASSRAELGATLNRLDFNVANLNSQASSMASSASQIEDAD 220
Query: 415 MASESTRLSALQTQQQLAV 433
MA E + ++ + + +
Sbjct: 221 MAKEMSEMTKFKILNEAGI 239
>gi|225552222|ref|ZP_03773162.1| Bacterial flagellin [Borrelia sp. SV1]
gi|225371220|gb|EEH00650.1| Bacterial flagellin [Borrelia sp. SV1]
Length = 336
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVRTAE 149
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/307 (10%), Positives = 80/307 (26%), Gaps = 1/307 (0%)
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ I D G I+ + + +++ + N + V
Sbjct: 31 SSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRM 90
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ + N DQA+ + +A T
Sbjct: 91 KELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSASQNVRTAEE 150
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ S+ + + V + VA + + ++
Sbjct: 151 LGMQPAKINTPSSLSGSQASWTLRVHVGANQDEAIAVNIYAANVANLFSGEGAQTAQAAP 210
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+ + + + ++ I+ I+ + +G+
Sbjct: 211 VQEGVQQEGAQQPAPATAPS-QGGVNSPVNVTTTVDANTSLAKIENAIRMVSDQRANLGA 269
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
+R+ ++ + + ++ ++ DA M E + Q A+ ++ N
Sbjct: 270 FQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSAMAMIAQANQVPQ 329
Query: 445 RILSLFR 451
+LSL R
Sbjct: 330 YVLSLLR 336
>gi|90418383|ref|ZP_01226295.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1]
gi|90338055|gb|EAS51706.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1]
Length = 309
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 81/205 (39%), Positives = 104/205 (50%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN SAM+A Q L IN NL+ Q+R+S+G RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNVSAMTALQSLSMINSNLDETQNRISTGFRVGAASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV DA+GLG +KVD A GM AIDV+ +K+K+ A E G D IQ+E+ +LQ QL
Sbjct: 61 GAVEDALGLGQAKVDTAYTGMKAAIDVVDEMKSKLVAAREPGVDKSKIQAELKELQGQLT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SF+GENWL D ++T+ + I +
Sbjct: 121 SIASSASFSGENWLSFDGAANTSKSVVASFNRSAAGAVSVGTIDIVIGGTKLFGDDTVGV 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
V
Sbjct: 181 GGANNGILNTAFTTTGAGAATVSVS 205
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 49/125 (39%), Positives = 70/125 (56%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
++ +G T++++ T A + + EM+S +D I+
Sbjct: 174 GDDTVGVGGANNGILNTAFTTTGAGAATVSVSTLDITAANIDDTDISEMISAVDGAIQSM 233
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
T A +G+ SR+ +Q +F+ +RD++EKGVG LVDADM ESTRL ALQTQQQL VQA
Sbjct: 234 TTGASNLGAAKSRMDIQSEFVSNLRDSIEKGVGTLVDADMTEESTRLKALQTQQQLGVQA 293
Query: 436 LSIVN 440
LSI N
Sbjct: 294 LSIAN 298
>gi|11345046|gb|AAG34566.1|AF241832_1 periplasmic flagellar filament protein FlaB3 [Brachyspira
hyodysenteriae]
Length = 280
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 76/188 (40%), Gaps = 3/188 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A+++L ++ ++SSG+R++ A D+A+ ++++ M+S L
Sbjct: 3 INNNISALNANRQLNLTGNSMTKTIAQLSSGMRINTAGDDASGLAVSEKMRSQYRGLQQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ G S + + +++ ++M ++ +D IQ E+ QL +++
Sbjct: 63 TRNAQNGISFIQTTEGYLNETTNIMQRMRELAIQSANGIYSDSDRALIQVEVNQLVAEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN N L + + IG+ + + L S
Sbjct: 123 RIASQAEFNKMNMLTGRFAADGQTPMTFHIGANMDQRVSINIGSMTAANLQVGGDTPISI 182
Query: 181 TDGTERYG 188
+
Sbjct: 183 SSVETANQ 190
Score = 75.2 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/221 (11%), Positives = 58/221 (26%)
Query: 225 ATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGN 284
+ L+ A +S + S + +
Sbjct: 52 MRSQYRGLQQATRNAQNGISFIQTTEGYLNETTNIMQRMRELAIQSANGIYSDSDRALIQ 111
Query: 285 SDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTL 344
++ + I S + + + + + D I+ G
Sbjct: 112 VEVNQLVAEVDRIASQAEFNKMNMLTGRFAADGQTPMTFHIGANMDQRVSINIGSMTAAN 171
Query: 345 NITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVE 404
+ + + + ID I+ + ++G++ +R+ + + +
Sbjct: 172 LQVGGDTPISISSVETANQALGRIDEGIQMVVSQRAELGAVQNRMESMVKSLMIATENTI 231
Query: 405 KGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445
+ DADMAS + Q QQ L+ N
Sbjct: 232 ASESVIRDADMASAMVAYTREQILQQTGAAMLANANMKNQS 272
>gi|155202|gb|AAA27529.1| flagellin [Vibrio parahaemolyticus]
gi|1518946|gb|AAB07350.1| lateral flagellin LafA [Vibrio parahaemolyticus]
Length = 284
Score = 107 bits (265), Expect = 6e-21, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 66/148 (44%), Gaps = 3/148 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN++++ L + L +R+S+G R++ A+D+AA IA +++ +S
Sbjct: 3 LSMHTNYASLVTQNTLNSTSGLLNTAMERLSTGYRINSASDDAAGLQIANRLEAQTRGMS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S + A+ M + ++ + + T D ++ +E QL ++
Sbjct: 63 VAMRNAQDGISMMQTAEGAMEEMTNITYRMNDLATQSLNGSNSDKDRAAMDAEFKQLSAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIA 146
L +I +SF G+ L G ++
Sbjct: 123 LNNIMGNTSFGGQKLLAAGGGFEAGAVT 150
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 39/100 (39%), Gaps = 3/100 (3%)
Query: 355 YNEKLAMEEMVSFIDTQ---IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ + + I I+ A + G+ +R+ + M + GR++
Sbjct: 185 IGDATKAKAALDKISDAGGLIEDIGATRAQFGANINRLEHTMTNLGNMVENTSAAKGRIM 244
Query: 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+AD A ES+ ++ Q Q LS N + +SL R
Sbjct: 245 EADFAVESSNMTKNQMLMQAGTTVLSKTNQLPSMAMSLLR 284
>gi|39357|emb|CAA34735.1| unnamed protein product [Borrelia burgdorferi]
gi|39361|emb|CAA33696.1| unnamed protein product [Borrelia burgdorferi]
Length = 336
Score = 107 bits (265), Expect = 6e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVRTAE 149
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/307 (9%), Positives = 80/307 (26%), Gaps = 1/307 (0%)
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ I D G I+ + + +++ + N + V
Sbjct: 31 SSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRM 90
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ + N DQA+ + +A T
Sbjct: 91 KELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSASQNVRTAEE 150
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ ++ + + V + VA + + ++
Sbjct: 151 LGMQPAKINTPASLSGSQASWTLRVHVGATQDEAIAVNIYAANVANLFSGEGAQTAQAAP 210
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+ + + + ++ I+ I+ + +G+
Sbjct: 211 VQEGVQQEGAQQPAPATAPS-QGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGA 269
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
+R+ ++ + + ++ ++ DA M E + Q A+ ++ N
Sbjct: 270 FQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSAMAMIAQANQVPQ 329
Query: 445 RILSLFR 451
+LSL R
Sbjct: 330 YVLSLLR 336
>gi|167626165|ref|YP_001676459.1| flagellin domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167356187|gb|ABZ78800.1| flagellin domain protein [Shewanella halifaxensis HAW-EB4]
Length = 271
Score = 107 bits (265), Expect = 6e-21, Method: Composition-based stats.
Identities = 35/262 (13%), Positives = 84/262 (32%), Gaps = 3/262 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S++TN+++ A + N L +R+S+GLR++ A+D+AA IA + ++ +
Sbjct: 1 MLSVMTNNASNIAQNAVTKNNDLLSNAMERLSTGLRINSASDDAAGLQIATRLNANVTGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQS 117
+ + +S + A + + ++ S K T D K++ +E +L +
Sbjct: 61 ETANRNVSDATSMLQTADGALDELNNIASRQKELATQAANGVNSAEDIKALGAEYKELNA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ I + + G I S S V + +
Sbjct: 121 EANRIIDSTEYGGNKLFTALDTGVGFQIGASNTASEQLTVKTDVAAVKTLFAGEITDSAT 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + + + + + + + K A
Sbjct: 181 AKAQIDNVDAIIDAVGTQRSNLGASINRLGHTASNLTNVTENTKAAAGRIMDTDFAVETA 240
Query: 238 TFDQAKGIATIPVPLPAAPAAP 259
+ + + + ++
Sbjct: 241 AMTKNQLLVQAGTNILSSSNQN 262
Score = 80.6 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 37/96 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + +D I +G+ +R+ + + + + GR++D D
Sbjct: 175 ITDSATAKAQIDNVDAIIDAVGTQRSNLGASINRLGHTASNLTNVTENTKAAAGRIMDTD 234
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A E+ ++ Q Q LS N +T ++ L
Sbjct: 235 FAVETAAMTKNQLLVQAGTNILSSSNQNTGLVMGLL 270
>gi|296126082|ref|YP_003633334.1| flagellin domain protein [Brachyspira murdochii DSM 12563]
gi|296017898|gb|ADG71135.1| flagellin domain protein [Brachyspira murdochii DSM 12563]
Length = 278
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 75/188 (39%), Gaps = 3/188 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++A+++L ++ ++SSG+R++ A D+A+ ++++ M+S L
Sbjct: 3 INNNISALNANRQLNLTGNSMTKTIAQLSSGMRINTAGDDASGLAVSEKMRSQYRGLQQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ G S + + +++ ++M ++ +D IQ E+ QL +++
Sbjct: 63 TRNAQNGISFIQTTEGYLNETTNIMQRMRELAIQSANGIYSDSDRALIQVEVNQLVAEVD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FN N L + + IG+ + L S
Sbjct: 123 RIASQAEFNKMNMLTGRFAADAQTPMTFHIGANMDQRVAVNIGAMTAANLQVGGDTPISI 182
Query: 181 TDGTERYG 188
+
Sbjct: 183 SSVETANQ 190
Score = 76.3 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 26/224 (11%), Positives = 60/224 (26%)
Query: 225 ATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGN 284
+ L+ A +S + S + +
Sbjct: 52 MRSQYRGLQQATRNAQNGISFIQTTEGYLNETTNIMQRMRELAIQSANGIYSDSDRALIQ 111
Query: 285 SDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTL 344
++ + I S + + + + + D ++ G
Sbjct: 112 VEVNQLVAEVDRIASQAEFNKMNMLTGRFAADAQTPMTFHIGANMDQRVAVNIGAMTAAN 171
Query: 345 NITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVE 404
+ + + + ID I+ A ++G++ +R+ + + +
Sbjct: 172 LQVGGDTPISISSVETANQALGRIDEGIQIVVAQRAELGAVQNRMESMVKSLMIATENTI 231
Query: 405 KGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ DADMAS + Q QQ L+ N I+
Sbjct: 232 ASESVIRDADMASAMVAYTREQILQQTGAAMLANANMKNQSIMR 275
>gi|90418382|ref|ZP_01226294.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1]
gi|90338054|gb|EAS51705.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1]
Length = 325
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 81/150 (54%), Positives = 101/150 (67%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN SAM+A Q L IN NL+ Q+R+S+G RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNVSAMTALQSLSMINNNLDETQNRISTGYRVGAASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV DA+GLG +KVD A GM AIDV+ IK K+ A E G D IQSEI +L++QL
Sbjct: 61 GAVEDALGLGQAKVDTAYTGMKAAIDVVDEIKTKLVAAREPGVDRNKIQSEIAELKNQLT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVI 150
I+ +SF+GENWL D + T ++ S
Sbjct: 121 SISESASFSGENWLNFDGAAVTKNVVASFN 150
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/89 (57%), Positives = 68/89 (76%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
M+S +DT +K T AA +G+ SR+++Q +F+ +RD++EKGVG LVDADM ESTRL
Sbjct: 237 AMISNVDTALKSMTTAASNLGAAQSRMNIQSEFVSNLRDSIEKGVGTLVDADMTEESTRL 296
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
ALQTQQQL VQALSI N+S+ ++SLFR
Sbjct: 297 KALQTQQQLGVQALSIANSSSQSLMSLFR 325
>gi|268316370|ref|YP_003290089.1| flagellin domain-containing protein [Rhodothermus marinus DSM 4252]
gi|262333904|gb|ACY47701.1| flagellin domain protein [Rhodothermus marinus DSM 4252]
Length = 273
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T I TN ++ A L+ N L + Q R+++G R++ A D++A +SIA +K+
Sbjct: 7 TRINTNLQSLQAYTYLQRTNTELGLRQLRLATGSRINRAEDDSAGYSIAAKLKAKIRGQE 66
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQ 118
IG S + +A+ ++ +D++ T+K K+ + +IQ+++ L ++
Sbjct: 67 QALANIGDAKSLLTVAEGSLNSIMDILQTMKEKVVQAANDTMGTSERAAIQNQLDALAAE 126
Query: 119 LRDIARGSSFNGENWLRTDL 138
+ DI + FNG +
Sbjct: 127 IDDIVGETEFNGTALFTSST 146
Score = 77.1 bits (187), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 49/140 (35%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ T ST + + + + ++ ID
Sbjct: 134 TEFNGTALFTSSTLTFQVNAEQGDTFQVTIGSLSASGLSVASLDVSSASSAGSAIAKIDA 193
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
I+ IGS R+ + D + +D E R+ DAD A E +L+ LQ QQ
Sbjct: 194 AIQTVADKLADIGSYQRRLSFKLDNLATAKDNYEAARSRIADADFAYEQMQLAKLQILQQ 253
Query: 431 LAVQALSIVNNSTARILSLF 450
+ AL+ N + +L LF
Sbjct: 254 TGIAALAQANAAPQAVLQLF 273
>gi|224534240|ref|ZP_03674818.1| hypothetical protein BSPA14S_0147 [Borrelia spielmanii A14S]
gi|224514342|gb|EEF84658.1| hypothetical protein BSPA14S_0147 [Borrelia spielmanii A14S]
Length = 336
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVKTAE 149
Score = 82.9 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 22/208 (10%), Positives = 58/208 (27%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVKTAEELGMQPAKINTPASLSGAQTSWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 189 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPTPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMVSDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+ ++ N +LSL R
Sbjct: 309 TNSILTQSAMAMIAQANQVPQYVLSLLR 336
>gi|91792673|ref|YP_562324.1| flagellin-like protein [Shewanella denitrificans OS217]
gi|91714675|gb|ABE54601.1| flagellin-like protein [Shewanella denitrificans OS217]
Length = 272
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 32/254 (12%), Positives = 80/254 (31%), Gaps = 3/254 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +++ A + L N L +R+SSG+R++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSLKAQKNLNISNSGLATSMERLSSGMRINGAKDDAAGLAISNRLNSQVRGLEV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S I++ M + +++ +++ D ++++E+ L ++
Sbjct: 64 GMRNANDAISIAQISEGAMQEQTNMLQRMRDLALQAENGSNSADDLTALKAEMDDLALEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I ++F + + G + K T +
Sbjct: 124 TSIGTTTAFGSTKLMTGTFSAGKLFQVGHQEGEDVTIKVKKTDATALSVNALTVLTSAGR 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ T+ + + +++ S + A +
Sbjct: 184 NSAITKIDAAIKTIDTQRATLGAVQNRLAHNISNSANTQANVADAKSRIVDVDFAKETSQ 243
Query: 240 DQAKGIATIPVPLP 253
+
Sbjct: 244 MTKNQVLQQTGSAM 257
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 31/209 (14%), Positives = 57/209 (27%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + + + +A A D+ + + +
Sbjct: 64 GMRNANDAISIAQISEGAMQEQTNMLQRMRDLALQAENGSNSADDLTALKAEMDDLALEI 123
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+T A + L E + T N
Sbjct: 124 TSIGTTTAFGSTKLMTGTFSAGKLFQVGHQEGEDVTIKVKKTDATALSVNALTVLTSAGR 183
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ ID IK +G++ +R+ + V R+VD D A E+++
Sbjct: 184 NSAITKIDAAIKTIDTQRATLGAVQNRLAHNISNSANTQANVADAKSRIVDVDFAKETSQ 243
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q QQ L+ N LSL
Sbjct: 244 MTKNQVLQQTGSAMLAQANQIPQIALSLL 272
>gi|229078941|ref|ZP_04211493.1| Flagellin [Bacillus cereus Rock4-2]
gi|228704355|gb|EEL56789.1| Flagellin [Bacillus cereus Rock4-2]
Length = 266
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 58/169 (34%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A+DN A +I M + +
Sbjct: 3 IGTNILSMNARQSLYENEKRMNVAMEHLATGKKLNHASDNPANVAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + ++++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVMNILQRMRDLAVQSSNGTNSNKNRHSLNKEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T I Q
Sbjct: 123 YIGETTKFNDLSVFDGQNCPVTLDDIGHTINMTKHIPPSPTQHDIKIST 171
Score = 95.6 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/265 (11%), Positives = 83/265 (31%), Gaps = 1/265 (0%)
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ N Q L + + + A ++T K + A
Sbjct: 1 MRIGTNILSMNARQSLYENEKRMNVAMEHLATGKKLNHASDNPANVAIVTRMHARASGMR 60
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
+ + + T+ + ++ + + +S+ ++S+ +
Sbjct: 61 VAIRNNEDAISMLRTAEAALQTVMNILQRMRDLAVQSSNGTNSNKNRHSLNKEFQSLTEQ 120
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD-AYNEKLAMEEMVS 366
+ +G T + D + +I +M D + + +
Sbjct: 121 IGYIGETTKFNDLSVFDGQNCPVTLDDIGHTINMTKHIPPSPTQHDIKISTEQEARTAIR 180
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
I+ ++ + +G++ +R+ + + A+ R+ DADMA E + +
Sbjct: 181 KIEEALQSVSFHRADLGAMINRLQFNIENLNSQSMALTDAASRIEDADMAQEMSDFLKFK 240
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
++A+ +S N + L +
Sbjct: 241 LLTEVALSMVSQANQIPQMVFKLLQ 265
>gi|78356547|ref|YP_387996.1| flagellin [Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|78218952|gb|ABB38301.1| flagellin [Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
Length = 297
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 79/204 (38%), Gaps = 3/204 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N A +A++ L NL R+SSGLRV AAD+AA +I +IM++D AL+
Sbjct: 3 LVINHNLMATNAARNLSQSYGNLSTSVRRLSSGLRVGTAADDAAGLAIREIMRADIAALN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A +S + + +K I SE + S+
Sbjct: 63 QGVRNANDAISLIQTADGALSVIDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG L +L S++ + V ++ G + DYY
Sbjct: 123 ITRIANATDFNGIALLNGNLSSASHDGSGLVSTGKLKVHFGTKNDSAEDYYYIQIGTSTA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQV 202
S+ + + + I +
Sbjct: 183 SALGLGNQSTVGGAGYTISTQSAA 206
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 46/135 (34%)
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
+ D + + T + + A + + I+ I
Sbjct: 163 GTKNDSAEDYYYIQIGTSTASALGLGNQSTVGGAGYTISTQSAAQNALVGIENAIVSKDK 222
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G++ +R+ +++ + ++ R+ D D++ E T + Q Q AV LS
Sbjct: 223 IRANLGALQNRLENTITNLQIQSENLQAAESRISDVDVSQEMTEFTRQQILTQSAVAMLS 282
Query: 438 IVNNSTARILSLFRG 452
N+ + L G
Sbjct: 283 QANSLPRMAMQLLGG 297
>gi|228933044|ref|ZP_04095907.1| Flagellin [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228826645|gb|EEM72416.1| Flagellin [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 371
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R+++A+D+AA +IA MK+ G L+ S G
Sbjct: 1 MRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMKAREGGLNVASRNTQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + A + ++ +++ +++ + ++Q E + L+ Q+ I++ +
Sbjct: 61 ISLIRTADSALNSVSNILLRMRDLANQSATGTNTEKNQSALQKEFSALKDQIDYISKNTQ 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIG 151
FN + L + + +I +
Sbjct: 121 FNDKALLSGEGDTQVGNITIKIQT 144
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 25/182 (13%), Positives = 57/182 (31%)
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
S A T+ ++ T + + T +T +
Sbjct: 190 SAMNTAFGTFKNEFDATTDPGDRNTAVDTLKAAWNANKANFDAATITDFETALNDYTTTV 249
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRI 389
D + + K A + V ID ++ + +G+ +R+
Sbjct: 250 DKDAAYTAIKEGFAKLTPASTSGAPAAGKPAALDAVKQIDKALESIATSRADLGATLNRL 309
Query: 390 HLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
+K +++ ++ DADMA E + ++ + + + LS N + + L
Sbjct: 310 DFNVTNLKSQENSMAASASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKL 369
Query: 450 FR 451
+
Sbjct: 370 LQ 371
>gi|188590093|ref|YP_001920170.1| flagellar hook-associated protein 3 [Clostridium botulinum E3 str.
Alaska E43]
gi|251778367|ref|ZP_04821287.1| flagellar hook-associated protein 3 [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|188500374|gb|ACD53510.1| flagellar hook-associated protein 3 [Clostridium botulinum E3 str.
Alaska E43]
gi|243082682|gb|EES48572.1| flagellar hook-associated protein 3 [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 402
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 54/434 (12%), Positives = 126/434 (29%), Gaps = 51/434 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ + + + +++ +Q+++SSG +S +DN S M ++ GA
Sbjct: 3 ITTSMLSSNYKSNMTTNLNHIQKLQNQLSSGKEISRPSDNPYKVSRTMQMYTEIGANKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
++ I S+ +D +++ +V + ++ + + K+IQ EI + +++
Sbjct: 63 NENIKDISNWLDTTDTSLNQMENVFARVRELLVTAGNGAYGPDEKKAIQDEIKERVNEMG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I I + + +
Sbjct: 123 QILNT----------------------------------NFDGVYIFGGTKSTSKPIMVN 148
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
++G Y D N K V D+ + D K + N T
Sbjct: 149 SNGELCYADKDGNAVSKTATGVKIDLTNPITDGGTKSIKGMEKDGNNVKMTITDTNTTPP 208
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
I + + ++ G +D + + D
Sbjct: 209 SETPITIDLSTIGSGT----------PPETAESLFKVALNGQGFADSDIGRLAGMVPSFD 258
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ V + + + + + +
Sbjct: 259 SLDQIGSELNVEVSQGVLINYNKNAVDLLEGNGTNIMSTLNKIITNLGTGGDQSVIT--- 315
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
E + +D IK ++G++ +R+ +D + + + + D D +
Sbjct: 316 -GECIGEVDDIIKNLLQHRAEVGAMQNRMESAQDKNESENLDMTDILSKTEDIDFTEKMI 374
Query: 421 RLSALQTQQQLAVQ 434
+ S +QT A+Q
Sbjct: 375 QYSIMQTVYMAALQ 388
>gi|15594492|ref|NP_212281.1| flagellin [Borrelia burgdorferi B31]
gi|223889113|ref|ZP_03623702.1| hypothetical protein BBU64B_0151 [Borrelia burgdorferi 64b]
gi|225549240|ref|ZP_03770213.1| Bacterial flagellin [Borrelia burgdorferi 94a]
gi|483569|emb|CAA49319.1| p41 [Borrelia burgdorferi]
gi|2688041|gb|AAC66541.1| flagellar filament 41 kDa core protein (flaB) [Borrelia burgdorferi
B31]
gi|223885362|gb|EEF56463.1| hypothetical protein BBU64B_0151 [Borrelia burgdorferi 64b]
gi|225370098|gb|EEG99538.1| Bacterial flagellin [Borrelia burgdorferi 94a]
gi|312147868|gb|ADQ30527.1| p41 [Borrelia burgdorferi JD1]
Length = 336
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVRTAE 149
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/307 (9%), Positives = 80/307 (26%), Gaps = 1/307 (0%)
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ I D G I+ + + +++ + N + V
Sbjct: 31 SSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRM 90
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ + N DQA+ + +A T
Sbjct: 91 KELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSASQNVRTAEE 150
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ ++ + + V + VA + + ++
Sbjct: 151 LGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVANLFSGEGAQTAQAAP 210
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+ + + + ++ I+ I+ + +G+
Sbjct: 211 VQEGVQQEGAQQPAPATAPS-QGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGA 269
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
+R+ ++ + + ++ ++ DA M E + Q A+ ++ N
Sbjct: 270 FQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSAMAMIAQANQVPQ 329
Query: 445 RILSLFR 451
+LSL R
Sbjct: 330 YVLSLLR 336
>gi|262166244|ref|ZP_06033981.1| flagellin B [Vibrio mimicus VM223]
gi|262025960|gb|EEY44628.1| flagellin B [Vibrio mimicus VM223]
Length = 314
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +E VS +D +K + +G+ +R + + + V R+ D D
Sbjct: 218 VSTVAGSQEAVSVLDGALKAVDSQRASLGAFQNRFGHAISNLDNVNENVNASRSRIRDTD 277
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A E+T ++ Q QQ + L+ S + LSL
Sbjct: 278 YARETTAMTKAQILQQASTSVLAQAKQSPSAALSLL 313
Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 52/162 (32%), Gaps = 3/162 (1%)
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ M++ +++ +++ G ++ K+IQ E++ L +
Sbjct: 1 MAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERKAIQEEVSALNDE 60
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA +SF G L G+ + I + + T
Sbjct: 61 LNRIAETTSFGGNKLLNGSFGNKSFQIGADSGEAVMLSMGNMRSDTQAMGGKSYRAQDGK 120
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
++ L N+ K I+ D ++T
Sbjct: 121 TADWRVGAATDLTLNYTDKQGNAQAVTINAKQGDDLEELATY 162
>gi|163800121|ref|ZP_02194022.1| lateral flagellin LafA [Vibrio sp. AND4]
gi|159175564|gb|EDP60358.1| lateral flagellin LafA [Vibrio sp. AND4]
Length = 289
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 71/205 (34%), Gaps = 3/205 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN++++ L + + L +R+S+G R++ AAD+AA IA ++S +S
Sbjct: 3 LSMHTNYASLVTQNTLNNTSNLLNTSMERLSTGYRINSAADDAAGLQIATRLESQTRGMS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQ 118
G S + A+ M + +++ + + T D ++ E QL +
Sbjct: 63 VAMRNSQDGISMMQTAEGAMDEMTNIVYRMNDLATQASNGSVSVNDRTALNEEYQQLGEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L +I +SF G L+ A++ + V
Sbjct: 123 LANIMDSTSFGGNKLLQDAGTFGAAAVNFQIGTQAGEQLKVDVSTQVQAINASIGVSGTL 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVL 203
D T +
Sbjct: 183 LLGDLTSEANAQAAMTDLTGTTGDA 207
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 32/80 (40%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ A +G+ +R+ + M + GR+ DAD A ES+ ++ Q Q
Sbjct: 210 LGEIGTARSALGANINRLEHTMTNLGNMIENTSAAKGRITDADFAVESSSMTKNQMLMQA 269
Query: 432 AVQALSIVNNSTARILSLFR 451
LS N +SL R
Sbjct: 270 GTTVLSQTNQLPGMAMSLLR 289
>gi|87242468|gb|ABD33773.1| flagellin [Bacillus thuringiensis serovar wuhanensis]
Length = 326
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGISLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++ E L+ Q+ I+ + FN + L
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTNENQAALNKEFDALKEQIDYISTNTEFNDKKLLDGSN 120
Query: 139 GSSTASI 145
+
Sbjct: 121 KTIAVQT 127
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 33/70 (47%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ IDT +K + +G+ +R+ + +K ++ ++ DADMA E + ++
Sbjct: 257 AIASIDTALKNIASNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMT 316
Query: 424 ALQTQQQLAV 433
+ + +
Sbjct: 317 KFKILNEAGI 326
>gi|229127084|ref|ZP_04256083.1| Flagellin [Bacillus cereus BDRD-Cer4]
gi|228656437|gb|EEL12276.1| Flagellin [Bacillus cereus BDRD-Cer4]
Length = 269
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 61/177 (34%), Gaps = 3/177 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A+DN A +I M + +
Sbjct: 6 IGTNILSMNARQSLYENEKRMNVSMEHLATGKKLNHASDNPANIAIVTRMHARASGMRVA 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ +E L Q+
Sbjct: 66 IRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSTNGTNSNKNRDSLNTEFQSLTEQIG 125
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
I+ + FN + T + Q + +
Sbjct: 126 YISETTEFNDLSVFDGQNRPITLDDISHTVHMTKHIPPSPTQHDIKISTEQEASAAI 182
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 27/267 (10%), Positives = 75/267 (28%)
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + ++ + KK A+ + A + +A
Sbjct: 1 MSIMRIGTNILSMNARQSLYENEKRMNVSMEHLATGKKLNHASDNPANIAIVTRMHARAS 60
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
G+ A + T + + + + + T
Sbjct: 61 GMRVAIRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSTNGTNSNKNRDSLNTEFQSL 120
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
T T + + + L + + + + + + +
Sbjct: 121 TEQIGYISETTEFNDLSVFDGQNRPITLDDISHTVHMTKHIPPSPTQHDIKISTEQEASA 180
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ I+ ++ + +GS+ +R+ + + A+ V ++ DADMA E +
Sbjct: 181 AILKIEEALQNVSLHRADLGSMINRLQFNIENLNSQSMALTDAVSQVEDADMAQEISDFL 240
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLF 450
+ ++ + +S N + L
Sbjct: 241 KFRLLTEVTLSMVSQANQIPQMVSKLL 267
>gi|224531806|ref|ZP_03672438.1| hypothetical protein BVAVS116_0146 [Borrelia valaisiana VS116]
gi|224511271|gb|EEF81677.1| hypothetical protein BVAVS116_0146 [Borrelia valaisiana VS116]
Length = 336
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSAAQNVKTAE 149
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/208 (11%), Positives = 59/208 (28%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + A T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSAAQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T T + + + +
Sbjct: 189 IYAANVANLFSGEGAQTAQATPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+ ++ N +LSL R
Sbjct: 309 TNSILTQSAMAMIAQANQVPQYVLSLLR 336
>gi|51598409|ref|YP_072597.1| flagellin [Borrelia garinii PBi]
gi|51572980|gb|AAU07005.1| flagellar filament 41 kDa core protein [Borrelia garinii PBi]
Length = 336
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNSINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVRTAE 149
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/208 (10%), Positives = 58/208 (27%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 189 IYAANVANLFSGEGSQAAQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAST 308
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+ ++ N +LSL R
Sbjct: 309 TNSILTQSAMAMIAQANQVPQYVLSLLR 336
>gi|149191173|ref|ZP_01869431.1| lateral flagellin LafA [Vibrio shilonii AK1]
gi|148835011|gb|EDL51990.1| lateral flagellin LafA [Vibrio shilonii AK1]
Length = 296
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 64/161 (39%), Gaps = 3/161 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN++++ L+ N L +++S+G R++ AAD+AA IA +++ + ++
Sbjct: 4 SVHTNYASLVTQNTLQSTNSALTKSMEKLSTGFRINSAADDAAGLQIANRLEAQSRGMNV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S + A+ + ++ + + T D ++ SE QL +L
Sbjct: 64 AMRNSQDAISMLQTAEGAFDEMTNIAYRMNDLATQAANGTNTTADLAALDSEYQQLGEEL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
+I +++ G N + + S
Sbjct: 124 ANILANTNYGGNNLMSGTGAFDATIDFQIGSTSAETLTFDT 164
Score = 76.3 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/295 (13%), Positives = 77/295 (26%)
Query: 156 DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASG 215
+ + T E+ R + + L+ + + G
Sbjct: 1 MAISVHTNYASLVTQNTLQSTNSALTKSMEKLSTGFRINSAADDAAGLQIANRLEAQSRG 60
Query: 216 TISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAA 275
+ S + AA T +
Sbjct: 61 MNVAMRNSQDAISMLQTAEGAFDEMTNIAYRMNDLATQAANGTNTTADLAALDSEYQQLG 120
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
+ N++ + D + T + T + D+ +
Sbjct: 121 EELANILANTNYGGNNLMSGTGAFDATIDFQIGSTSAETLTFDTTVGGGSSALADIQAFV 180
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
+ S+ ++T AN A + L + + + G+ +R+
Sbjct: 181 GTSGSLGIGDLTTQANALAAMDDLTGVPATATDNGFVGNLGEIRSTFGATINRLEHTITN 240
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ M + V+ GR++D D ASES +S Q Q LS +SL
Sbjct: 241 LGNMTENVDASKGRIMDTDFASESGNMSKQQMLMQSGASMLSASKMVPQLAMSLL 295
>gi|483497|emb|CAA49317.1| p41 [Borrelia burgdorferi]
Length = 336
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKAQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASRNVRTAE 149
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/208 (10%), Positives = 58/208 (27%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASRNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 189 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+ ++ N +LSL R
Sbjct: 309 TNSILTQSAMAMIAQANQVPQYVLSLLR 336
>gi|126175137|ref|YP_001051286.1| flagellin domain-containing protein [Shewanella baltica OS155]
gi|304409969|ref|ZP_07391588.1| flagellin domain protein [Shewanella baltica OS183]
gi|307302318|ref|ZP_07582076.1| flagellin domain protein [Shewanella baltica BA175]
gi|125998342|gb|ABN62417.1| flagellin domain protein [Shewanella baltica OS155]
gi|304351378|gb|EFM15777.1| flagellin domain protein [Shewanella baltica OS183]
gi|306914356|gb|EFN44777.1| flagellin domain protein [Shewanella baltica BA175]
Length = 274
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 69/163 (42%), Gaps = 3/163 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +++ A + L L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSLKAQKNLNSSATGLASSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S I++ M + +++ +++ +D +I+SE+ L +++
Sbjct: 64 GMRNANDAISIAQISEGAMQEQTNMLQRMRDLTIQAENGSNSTSDIGAIKSELDALATEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
IA ++F L + G I+ GKV
Sbjct: 124 TAIANTTAFGNTKLLDGSFSAGKTFQVGHQNGEDIKVSVGKVT 166
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 61/206 (29%)
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
I + + A T+ + ++ A + +
Sbjct: 69 NDAISIAQISEGAMQEQTNMLQRMRDLTIQAENGSNSTSDIGAIKSELDALATEITAIAN 128
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
+ T ++ S + I +A+ +
Sbjct: 129 TTAFGNTKLLDGSFSAGKTFQVGHQNGEDIKVSVGKVTASAIKVNASVILVSTAGQRSTS 188
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+S ID IK + K+G+I +R+ + V R+VD D A E+++++
Sbjct: 189 LSNIDAAIKTIDSQRAKLGAIQNRLAYNISNSANTQANVADAKSRIVDVDFAKETSQMTK 248
Query: 425 LQTQQQLAVQALSIVNNSTARILSLF 450
Q QQ L+ N LSL
Sbjct: 249 NQVLQQTGSAMLAQANQLPQVALSLL 274
>gi|148554205|ref|YP_001261787.1| flagellin domain-containing protein [Sphingomonas wittichii RW1]
gi|148499395|gb|ABQ67649.1| flagellin domain protein [Sphingomonas wittichii RW1]
Length = 273
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 43/226 (19%), Positives = 75/226 (33%), Gaps = 3/226 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN S++ A R + R+SSG R++ A D+AA +IA M + +
Sbjct: 1 MTVINTNISSLRAQNAGRLADQLQSTAMSRLSSGKRINSAKDDAAGLAIASSMTASIRGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQS 117
S G S A+ + +A +++ ++ ++Q+E+ LQS
Sbjct: 61 SVAIRNANDGISLAQTAEGALGEAANMLQRVRELAVQAASGTYQSTDRANLQTEVAALQS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ DI G+ FNG G+S + G G + Y +
Sbjct: 121 QISDIVTGTKFNGNTLFSATSGTSFSIQTGVNSGDATAISVGALDKVAAAYAATIKVDTA 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
++ + T +
Sbjct: 181 TNAGLAITAADTALTQVATVRASLGANQNRLDATINVLTANITNLS 226
Score = 91.0 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 24/179 (13%), Positives = 54/179 (30%)
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+A+ ++ + T S ++ + +
Sbjct: 95 AVQAASGTYQSTDRANLQTEVAALQSQISDIVTGTKFNGNTLFSATSGTSFSIQTGVNSG 154
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ +A T + ++ DT + +G+ +R+
Sbjct: 155 DATAISVGALDKVAAAYAATIKVDTATNAGLAITAADTALTQVATVRASLGANQNRLDAT 214
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + + R+ D D + EST L+ QQ + L+ N S +LSL +
Sbjct: 215 INVLTANITNLSEARSRIEDTDFSVESTALAKAGILQQASTAMLAQANQSQQSVLSLLK 273
>gi|104782830|ref|YP_609328.1| flagellin [Pseudomonas entomophila L48]
gi|95111817|emb|CAK16541.1| type B flagellin [Pseudomonas entomophila L48]
Length = 286
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 73/213 (34%), Gaps = 3/213 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN +++ + L + L R+SSGL+++ A D+AA IA M S +
Sbjct: 3 LTVNTNTTSLGVQKNLNRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRMTSQIRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQ 118
G S A+ M + +++ ++ D ++ E + +
Sbjct: 63 MAIKNANDGISIAQTAEGAMQEQTNILQRMRELALQSRNDSNSQTDRDALDKEFQSMLKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + NG+N L G+ T + + + + T +
Sbjct: 123 IDRIADSTQLNGKNLLDGSAGAMTFQVGSNTGTANQITITLSAAMKTTGTGAALTALAGK 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
S T + + L I+ +
Sbjct: 183 SITGANSTAAEATFSAAMDAIGSALDAINATRA 215
Score = 77.1 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 53/141 (37%)
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
T + + K +G ++ L ++ + + I
Sbjct: 145 MTFQVGSNTGTANQITITLSAAMKTTGTGAALTALAGKSITGANSTAAEATFSAAMDAIG 204
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ + A +G+ +R+ + ++ + + E GR+ D D A+E+ +L+ QT Q
Sbjct: 205 SALDAINATRADLGANQNRLTSTINNLQNINENAEAARGRVQDTDFAAETAQLTKQQTLQ 264
Query: 430 QLAVQALSIVNNSTARILSLF 450
Q + L+ N + +L L
Sbjct: 265 QASTSVLAQANQLPSAVLKLL 285
>gi|13560146|emb|CAC36204.1| flagelline [Treponema lecithinolyticum]
Length = 274
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 76/195 (38%), Gaps = 3/195 (1%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
SAM +++ L N +++SSG++++ A D+A+ ++++ M+S L+ S
Sbjct: 1 MSAMYSNRVLGVTNLAQAKDMEKLSSGMKINRAGDDASGLAVSEKMRSQIRGLNQASRNA 60
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
G S + +++A + + D+M I+ D IQ E++QL +++ IA
Sbjct: 61 QNGISFIQVSEAYLQETTDIMHRIRELAVQASNGIYSDEDRMYIQVEVSQLVAEVDRIAS 120
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ FNG N L +T + N ++ + V +
Sbjct: 121 HAQFNGMNMLTGRFARATGENTITASMWLHIGANMDQRMQVFIGTMTAMAVGVRDIGSEQ 180
Query: 185 ERYGLLDRNHKIKVE 199
+
Sbjct: 181 IMTIATPEEANRSIG 195
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 14/109 (12%), Positives = 31/109 (28%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
V + + ID +K +G +R+ +
Sbjct: 166 MTAMAVGVRDIGSEQIMTIATPEEANRSIGIIDEGLKKINKQRADLGGYQNRLEQTVKGL 225
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445
+ + ++ + D DMA + + + Q L+ N +T
Sbjct: 226 DVAAENLQAAESTIRDTDMAKQMVDFTKNRILAQAGTAMLAQANVTTQN 274
>gi|85700107|gb|ABC74504.1| flagellin [Borrelia duttonii]
gi|85700113|gb|ABC74507.1| flagellin [Borrelia duttonii]
gi|85700115|gb|ABC74508.1| flagellin [Borrelia duttonii]
gi|85700117|gb|ABC74509.1| flagellin [Borrelia duttonii]
Length = 327
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNAINVANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + + + V+ +K D SIQ E+ QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLDEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEVEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNHMHMLSNRSSAEHVRTAE 149
Score = 69.8 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 33/93 (35%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ T +G+ +R+ + + + ++ ++
Sbjct: 235 SPVNVTTAVDANMSLTKIEDAIRMITDQRANLGAFQNRLESVKASTEYAIENLKASYAQI 294
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNST 443
DA M E + Q A+ ++ N
Sbjct: 295 KDATMTDEIVASTTNSILTQSAMAMIAQANQVP 327
>gi|229029439|ref|ZP_04185522.1| Flagellin [Bacillus cereus AH1271]
gi|228731898|gb|EEL82797.1| Flagellin [Bacillus cereus AH1271]
Length = 269
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 59/177 (33%), Gaps = 3/177 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G ++++A+DN A +I M + +
Sbjct: 6 IGTNVLSMNARQSLFENEKRMNVAMEHLATGKKLNNASDNPANVAIVTRMHARASGMRVA 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L Q+
Sbjct: 66 IRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIG 125
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
I + FN + T + Q +
Sbjct: 126 YIDETTEFNDLSVFDGQNRPVTLDDIGHTVNIMKHIPPSPTQHDIKISTEQETRAAI 182
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/239 (11%), Positives = 68/239 (28%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T + +
Sbjct: 30 MEHLATGKKLNNASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNI 89
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + T T + + + L
Sbjct: 90 LQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIDETTEFNDLSVFDGQNRPVTLD 149
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ M + + + + + + I+ + +G++ +R+
Sbjct: 150 DIGHTVNIMKHIPPSPTQHDIKISTEQETRAAIRKIEEALHNVLLHRADLGAMMNRLQFN 209
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 210 IENLNSQSMALTDTTSRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVYKLLQ 268
>gi|187694757|gb|ACD13940.1| flagellin [Borrelia sp. IA-1]
Length = 334
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNSINAANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSSAQNIKTAE 149
Score = 80.2 bits (195), Expect = 7e-13, Method: Composition-based stats.
Identities = 22/169 (13%), Positives = 50/169 (29%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G+ W + + N A V N + + +
Sbjct: 166 GSQASWTLRVHVGANQDEAIAVNIYAANVANLFAGEGAQVSPAQEGAQQEGVQAAPAPAA 225
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + +S I+ I+ + +G+ +R+ + + +
Sbjct: 226 APAQGGVNSPVNVTTTVDANMSLSKIENAIRMVSDQRANLGAFQNRLESIKASTEYAIEN 285
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ ++ DA M E + Q A+ ++ N +LSL R
Sbjct: 286 LKSSYAQIKDATMTDEIVASTTNSILTQSAMAMIAQANQVPQYVLSLLR 334
>gi|167576624|ref|ZP_02369498.1| flagellin D [Burkholderia thailandensis TXDOH]
Length = 269
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 28/240 (11%), Positives = 75/240 (31%)
Query: 212 DASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
++++ + AT+ + A + A A + +
Sbjct: 30 HLGMKVASENAQNATSMLQTAEGAFKEVETILHRMNELATKAADSAWTQADRDSLQKEYD 89
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
++ I S + + + G + + + +
Sbjct: 90 ALGTELKNIVDNTSYGGEKLFAGGASGAAQGKLKQELTFQIGNTSGEVMKLDVSKALESA 149
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
K + + + + + + ++ + + + + ++G+ +R+
Sbjct: 150 VKAFEEASQVFKGDASGASGSTDITSISGANALLDKLSSALSAVGSLRAELGAGQNRLSH 209
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + MRD + GR+ D D ASE+ ++ L QQ L + + +LSL +
Sbjct: 210 IANNLTNMRDNTQDAEGRIRDVDYASETANMTKLNILQQAGGSMLKQASQMSQLVLSLLQ 269
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 66/181 (36%), Gaps = 3/181 (1%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
R+ +G R++ A+D+AA IA +KS + + S+ +S + A+ + +
Sbjct: 1 MTRLGTGYRINSASDDAAGLQIATRLKSQHLGMKVASENAQNATSMLQTAEGAFKEVETI 60
Query: 88 MSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ + T + D S+Q E L ++L++I +S+ GE +
Sbjct: 61 LHRMNELATKAADSAWTQADRDSLQKEYDALGTELKNIVDNTSYGGEKLFAGGASGAAQG 120
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
K + I + +G+V + L+ + ++ +
Sbjct: 121 KLKQELTFQIGNTSGEVMKLDVSKALESAVKAFEEASQVFKGDASGASGSTDITSISGAN 180
Query: 205 D 205
Sbjct: 181 A 181
>gi|5668622|dbj|BAA82629.1| flagellin protein [Borrelia valaisiana]
Length = 336
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSAAQNVKTAE 149
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 21/208 (10%), Positives = 58/208 (27%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + A T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSAAQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + + +
Sbjct: 189 IYAANVANLFSGEGAQSAQAAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMVSDQRSNLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+ ++ N +LSL R
Sbjct: 309 TNSILTQSAMAMIAQANQVPQYVLSLLR 336
>gi|90418384|ref|ZP_01226296.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1]
gi|90338056|gb|EAS51707.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1]
Length = 319
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 82/145 (56%), Positives = 99/145 (68%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN SAM+A Q L IN NL+ Q+R+S+G RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNTSAMTALQSLSMINSNLDETQNRISTGFRVGAASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV DA+GLG +KVD A GM+ AIDV+ IK K+ A E G D IQSEIT+LQ QL
Sbjct: 61 GAVEDALGLGQAKVDTAYTGMNAAIDVVDEIKAKLVAAREPGVDKTKIQSEITELQGQLT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
IA +SF+GENWL D + +
Sbjct: 121 SIATSASFSGENWLSVDSTAPANAT 145
Score = 80.2 bits (195), Expect = 7e-13, Method: Composition-based stats.
Identities = 60/308 (19%), Positives = 101/308 (32%), Gaps = 3/308 (0%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ + + N + D ++T ++ L
Sbjct: 4 INTNTSAMTALQSLSMINSNLDETQNRISTGFRVGAASDNAAYWSIATTMRSDNKALGAV 63
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + + + A + K KL + + + +
Sbjct: 64 EDALGLGQAKVDTAYTGMNAAIDVVDEIKAKLVAAREPGVDKTKIQSEITELQGQLTSIA 123
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+A + + + S +S V T TS ++
Sbjct: 124 TSASFSGENWLSVDSTAPANATKSVVASFNRDSAGAVSVGTIEVDTSKTKLFDAATDAAT 183
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+D + D + + +S +D +
Sbjct: 184 AGTGILDGMYSAADGSYLADQTAAGFNVSTLDISALTDAAGDVTTLNSY---ISGVDDAL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ T AA +G+ SR+ +Q +F+ +RD++EKGVG LVDADM ESTRL ALQTQQQL
Sbjct: 241 QRMTTAASNLGAAKSRMDIQSEFVSNLRDSIEKGVGTLVDADMTEESTRLKALQTQQQLG 300
Query: 433 VQALSIVN 440
VQALSI N
Sbjct: 301 VQALSIAN 308
>gi|85700071|gb|ABC74486.1| flagellin [Borrelia recurrentis A1]
gi|85700073|gb|ABC74487.1| flagellin [Borrelia recurrentis]
gi|85700075|gb|ABC74488.1| flagellin [Borrelia recurrentis]
gi|85700077|gb|ABC74489.1| flagellin [Borrelia recurrentis]
gi|85700079|gb|ABC74490.1| flagellin [Borrelia recurrentis]
gi|85700081|gb|ABC74491.1| flagellin [Borrelia recurrentis]
gi|85700083|gb|ABC74492.1| flagellin [Borrelia recurrentis]
gi|85700085|gb|ABC74493.1| flagellin [Borrelia recurrentis]
gi|85700087|gb|ABC74494.1| flagellin [Borrelia recurrentis]
gi|85700089|gb|ABC74495.1| flagellin [Borrelia recurrentis]
gi|85700091|gb|ABC74496.1| flagellin [Borrelia recurrentis]
gi|85700093|gb|ABC74497.1| flagellin [Borrelia recurrentis]
gi|85700095|gb|ABC74498.1| flagellin [Borrelia recurrentis]
gi|85700097|gb|ABC74499.1| flagellin [Borrelia recurrentis]
gi|85700099|gb|ABC74500.1| flagellin [Borrelia recurrentis]
gi|85700101|gb|ABC74501.1| flagellin [Borrelia recurrentis]
gi|85700103|gb|ABC74502.1| flagellin [Borrelia recurrentis]
gi|85700105|gb|ABC74503.1| flagellin [Borrelia recurrentis]
gi|85700109|gb|ABC74505.1| flagellin [Borrelia duttonii Ly]
gi|85700111|gb|ABC74506.1| flagellin [Borrelia duttonii]
Length = 327
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNAINVANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + + + V+ +K D SIQ E+ QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLDEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEVEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNHMHMLSNRSSAEHVRTAE 149
Score = 69.8 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 33/93 (35%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ T +G+ +R+ + + + ++ ++
Sbjct: 235 SPVNVTTAVDANMSLTKIEDAIRMITDQRANLGAFQNRLESVKASTEYAIENLKASYAQI 294
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNST 443
DA M E + Q A+ ++ N
Sbjct: 295 KDATMTDEIVASTTNSILTQSAMAMIAQANQVP 327
>gi|78358191|ref|YP_389640.1| flagellar hook-associated protein FlgL [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78220596|gb|ABB39945.1| flagellar hook-associated protein FlgL, putative [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 504
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 50/485 (10%), Positives = 113/485 (23%), Gaps = 60/485 (12%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+ NL + SS R++ +D+ + + A+ + +S +
Sbjct: 15 NMNMSLSNLMDSNIQASSQKRINKPSDDPVGAARVMGYRDSLAAIKQYRSNVDTATSWLA 74
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGEN 132
A +++ V++ IK + + I E+ Q QL ++A
Sbjct: 75 TADQTLTQVNTVLTRIKGLAEQAATGTLDANNREQISFELRQQYEQLINLANTRVEGRHI 134
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQ-------ITTIDYYLDPETVLLDSSTDGTE 185
+ +V I + + + S +
Sbjct: 135 FAGHKTDQPAFVQGLNVSTIDTAFSGASFSVSGSLEKTMLIQFTSNGQVGTDALSYRYSN 194
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
G + + L V V +G +
Sbjct: 195 DGGDTWQTGTLSAGGTTLTAGSVQVELPAGRTVSAVNPDNPHETDNGTWLYVRPTAVYKG 254
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT- 304
+ + +G V S I +T N T G T
Sbjct: 255 DDNDSTTVQSYGNNLVNASGNGYFKSDVMVRIDSGTDLASGITYSYSTDNGSTWVEGNTT 314
Query: 305 ----------------------------------------------NSTVAKVGNTHYYV 318
+ + +
Sbjct: 315 SGTGSSASLLIPGGFLELSSGAGSAVNPGDQFILRPHRADIQLEISPGEHLTINSVGKDI 374
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ G S + + N + ++ ++ +D +
Sbjct: 375 FGGIYNPPDGSGPQVAMGGGTSNLFEVVGELVAFAETNNQAGIQRSLAALDDVGQHVMTQ 434
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL---AVQA 435
IG +R+ + ++ + + + + D D+A TRL+ Q +
Sbjct: 435 VASIGGRENRLDVAKNVLTTAELDDKSRMSDIEDVDVAELMTRLAQQQLIYNSVLKSSSM 494
Query: 436 LSIVN 440
+ +N
Sbjct: 495 IMQMN 499
>gi|308198489|pdb|3K8V|A Chain A, Crysatl Structure Of A Bacterial Cell-Surface Flagellin
N20c20
gi|308198490|pdb|3K8V|B Chain B, Crysatl Structure Of A Bacterial Cell-Surface Flagellin
N20c20
Length = 351
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 73/181 (40%), Gaps = 3/181 (1%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
+L R+SSGLR++ A D+AA +I+ M + L+ G S A+
Sbjct: 1 TQNSLSTSLQRLSSGLRINSAKDDAAGLAISDRMTAQIKGLTQAQRNANDGISLAQTAEG 60
Query: 80 GMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+ + + + I+ TD ++Q+E+TQLQS+++ +A +SFNG+ L
Sbjct: 61 ALGEISNNLQRIRELAVQASNGTNTQTDRDALQAEVTQLQSEIQRVAEQTSFNGQKLLDG 120
Query: 137 DLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
I + + Q ++ L T +D++ + + I
Sbjct: 121 SFNGVQFQIGANAGETIGVSKIMNAQTASLGGSLTRTTSTIDATDLTKYDTAMAAGDLTI 180
Query: 197 K 197
Sbjct: 181 N 181
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/331 (11%), Positives = 81/331 (24%)
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
+ + + + + + G S A A+ +G +
Sbjct: 13 SSGLRINSAKDDAAGLAISDRMTAQIKGLTQAQRNANDGISLAQTAEGALGEISNNLQRI 72
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
++ D+ + + + K +D S I
Sbjct: 73 RELAVQASNGTNTQTDRDALQAEVTQLQSEIQRVAEQTSFNGQKLLDGSFNGVQFQIGAN 132
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ S + + +G V
Sbjct: 133 AGETIGVSKIMNAQTASLGGSLTRTTSTIDATDLTKYDTAMAAGDLTINGVDVGKIDAAS 192
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+ + + T + + + +
Sbjct: 193 TAQERAAQLTEAINRVSSQTNVGASYDKTTGQVTLTSNAAIAVAGAANDATVAGWANNAT 252
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T T N+ + ++ ++ ID +K A +G++ +R ++ M
Sbjct: 253 TGTATTTTGINSLTVSSFTNAQQTITQIDNALKDINTARADLGAVQNRFTSTVANLQSMT 312
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ + GR+ DAD ASE+ LS Q QQ
Sbjct: 313 ENLSSARGRVTDADFASETANLSRAQILQQA 343
>gi|71067025|gb|AAZ22695.1| flagellin [Bacillus cereus]
Length = 310
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L
Sbjct: 40 INTNINSMRTQEYMRQNQDKMNTAMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLVVG 99
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + + + +++ +++ T TD S+ E QL++++
Sbjct: 100 ARNTQDAMSALRTGDSALQSMSNILLRMRDLATQASSGTNGTTDVTSVGKEYAQLKAEID 159
Query: 121 DIARGSSFNGENWLRTDLG 139
IA ++FNG+ +L D G
Sbjct: 160 HIAEKTNFNGKAFLNADAG 178
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 26/199 (13%), Positives = 62/199 (31%)
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A + ++ + + AS+ + + + D +
Sbjct: 112 TGDSALQSMSNILLRMRDLATQASSGTNGTTDVTSVGKEYAQLKAEIDHIAEKTNFNGKA 171
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ ++ D + S+ T ++T D + +DT I
Sbjct: 172 FLNADAGGDADISVQLSDASGDTLVIQSLNTKDLTTANLGDDITTNELAAAELDKLDTAI 231
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A GS +R+ + + + ++ DADMA E + ++ + +
Sbjct: 232 QSIADARATFGSQLNRLDHNLNNVTSQATNMAAAASQIEDADMAKEMSEMTKFKILNEAG 291
Query: 433 VQALSIVNNSTARILSLFR 451
+ LS N + + L +
Sbjct: 292 ISMLSQANQTPQMVSKLLQ 310
>gi|483438|emb|CAA49322.1| p41 [Borrelia burgdorferi]
Length = 336
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNSINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +S+ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLSEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVRTAE 149
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/208 (10%), Positives = 58/208 (27%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 189 IYAANVANLFSGEGSQAAQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAST 308
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+ ++ N +LSL R
Sbjct: 309 TNSILTQSAMAMIAQANQVPQYVLSLLR 336
>gi|152536|gb|AAA26411.1| flagellin [Roseburia cecicola]
Length = 293
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 34/206 (16%), Positives = 71/206 (34%), Gaps = 3/206 (1%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N +AM+A+++L +++SSG R++ A D+AA +I++ M+S L+ S
Sbjct: 6 NMTAMNANRQLGITTGAQAKSTEKLSSGYRINRAGDDAAGLTISEKMRSQIRGLNKASSN 65
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIA 123
G S + +A+ +++ ++ + T D +IQ+EI QL S++ I
Sbjct: 66 AQDGVSLIQVAEGALNETHSILQRMNELATQAANDTNTTADRNAIQAEINQLSSEINRIQ 125
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ FN N + + + + +
Sbjct: 126 STTQFNTMNLIDGSYTGKNLQVGSLSGQKIEISIANMDATSLFGGSTQDAAKATNFDVNT 185
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVS 209
+ +
Sbjct: 186 SNLKAYCKNLAVSSFSTAGSSMKFIQ 211
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 72/200 (36%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
A NTT+ + ++ S+ R+ ++ + + + +++
Sbjct: 94 ATQAANDTNTTADRNAIQAEINQLSSEINRIQSTTQFNTMNLIDGSYTGKNLQVGSLSGQ 153
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ ++T+L + + + T N+ + A + + FI ++
Sbjct: 154 KIEISIANMDATSLFGGSTQDAAKATNFDVNTSNLKAYCKNLAVSSFSTAGSSMKFIQSR 213
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I + +G++ +R+ + + + + R+ D DMA E S Q
Sbjct: 214 IALVSEQRSALGAVQNRLEHTIANLDNISENTQSAESRIRDTDMAEEMVEYSKNNILAQA 273
Query: 432 AVQALSIVNNSTARILSLFR 451
L+ N ST +LSL +
Sbjct: 274 GQSMLAQANQSTQGVLSLLQ 293
>gi|5107841|gb|AAD28520.2|AF128949_1 flagellin [Escherichia coli]
Length = 521
Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats.
Identities = 47/354 (13%), Positives = 100/354 (28%), Gaps = 4/354 (1%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
L +R+SSGLR++ A D+AA +IA S+ L+ + G S +
Sbjct: 1 NQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEG 60
Query: 80 GMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+S+ + + I+ +D SIQ EI ++ ++ + FNG N L
Sbjct: 61 ALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAK 120
Query: 137 DLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
D + + + D T ++T T +
Sbjct: 121 DGSMK-IQVGANDGQTITIDLKKIDSDTLGLNGFIVNGKGETANTAATLKDMSGFTAAAA 179
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
+ AS A + A A + +
Sbjct: 180 PGGTVGVTQYTDKSAVASSVNILNAVAGADGNKVTTSADVGFGTPAAAVTYTYNKDTNSY 239
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
+A + ++ + + + + + + + +
Sbjct: 240 SAASDDISSANLAAFLNPQARDTTKATVTIGGKDQDVNIDKSGNLTAADDGAVLYMDATG 299
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ + D++ L K + + + ++ A + ID
Sbjct: 300 NLTKNNAGGDTQATLAKVATATATGAKAATIQTDKGTFTSDGTAFDGASMSIDA 353
Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/302 (11%), Positives = 76/302 (25%)
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
T + + D + D L+ T + +
Sbjct: 214 TTSADVGFGTPAAAVTYTYNKDTNSYSAASDDISSANLAAFLNPQARDTTKATVTIGGKD 273
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
V ++ + A + +G +A A A +
Sbjct: 274 QDVNIDKSGNLTAADDGAVLYMDATGNLTKNNAGGDTQATLAKVATATATGAKAATIQTD 333
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
+ S S+ A+ + N K + T
Sbjct: 334 KGTFTSDGTAFDGASMSIDANTFANAVKNDTYTATVGAKTYSVTTGSAAADTAYMSNGVL 393
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
E + +V TD ++ + + ++ +D I
Sbjct: 394 SDTPPTYYAQADGSITTTEDAAAGKLVYKGSDGKLTTDTTSKAESTSDPLAALDDAISQI 453
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 454 DKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 513
Query: 436 LS 437
L+
Sbjct: 514 LA 515
>gi|302669858|ref|YP_003829818.1| flagellin FliC2 [Butyrivibrio proteoclasticus B316]
gi|302394331|gb|ADL33236.1| flagellin FliC2 [Butyrivibrio proteoclasticus B316]
Length = 286
Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats.
Identities = 42/256 (16%), Positives = 86/256 (33%), Gaps = 3/256 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N +AM+++++L +++SSG +++ AAD+AA +I++ M+ L+
Sbjct: 14 VVQHNITAMNSNRQLGITTGIQAKSSEKLSSGYKINRAADDAAGLAISEKMRRQVRGLTQ 73
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
S G S V A+ +++ D++ + T TD IQSE+ L +++
Sbjct: 74 ASANAQDGISAVQTAEGALNEVHDMLQRMNELATKAANDTLTTTDRTYIQSEMNALSTEI 133
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
A + FN + L + + + K T + +
Sbjct: 134 TRTAEATEFNNQKLLDGSFTNKNLQVGSETEAKNQIEICIKSMSATSIGVATSDIKVTSH 193
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + I + L I + + + A AT
Sbjct: 194 ADAKNTITAVKAALESISTQRSDLGAIQNRLEHTIKNLDNVVENTQSAESAIRDTDMATE 253
Query: 240 DQAKGIATIPVPLPAA 255
I +
Sbjct: 254 MVKYSNNNILAQAGQS 269
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 24/207 (11%), Positives = 59/207 (28%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
V ++ + AA+ T + I ++ +
Sbjct: 79 QDGISAVQTAEGALNEVHDMLQRMNELATKAANDTLTTTDRTYIQSEMNALSTEITRTAE 138
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + SM +I + +
Sbjct: 139 ATEFNNQKLLDGSFTNKNLQVGSETEAKNQIEICIKSMSATSIGVATSDIKVTSHADAKN 198
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ + ++ + +G+I +R+ + + + + + D DMA+E + S
Sbjct: 199 TITAVKAALESISTQRSDLGAIQNRLEHTIKNLDNVVENTQSAESAIRDTDMATEMVKYS 258
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLF 450
Q L+ N S +LSL
Sbjct: 259 NNNILAQAGQSMLAQANQSNQGVLSLL 285
>gi|25814815|gb|AAN75633.1|AF270499_1 FlaB1 [Leptospira borgpetersenii]
Length = 196
Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 35/96 (36%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + + +D + +G+ +R+ + + + ++ R+ D DM
Sbjct: 101 STAEFANDSIGVLDDALMKINKQRANLGAYFNRLEHASKGLMVAYENIQASESRIRDTDM 160
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A E+ + Q Q L+ N +L L R
Sbjct: 161 AEETVAFTKNQILVQSGTAMLAQANVRPQSVLQLLR 196
Score = 37.8 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Query: 87 VMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTA 143
++ I+ D + IQ E++QL ++ IA + FN L+ D +
Sbjct: 1 IIQRIRVLAIQSSNGIYSAEDRQMIQVEVSQLVDEIDRIASQAEFNKMALLQGDFARGSR 60
Query: 144 SIAKSVIGSFIRDDN 158
+ + +
Sbjct: 61 TSSMWFHIGPNQHQR 75
>gi|5668682|dbj|BAA82633.1| flagellin protein [Borrelia valaisiana]
Length = 336
Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSAAQNVKTAE 149
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 21/208 (10%), Positives = 57/208 (27%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + A T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSAAQNVKTAEELGMQPAKINTPASLSGSQTSWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + +
Sbjct: 189 IYAANVANLFSGEGAQSAQAAPVQEGAQQEGAQQPAPATAPAQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMVSDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+ ++ N +LSL R
Sbjct: 309 TNSILTQSAMAMIAQANQVPQYVLSLLR 336
>gi|209546052|ref|YP_002277942.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209538909|gb|ACI58842.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 302
Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats.
Identities = 82/146 (56%), Positives = 103/146 (70%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN+SAM+A Q LR IN NLE Q+ VS+G RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNNSAMAALQTLRSINSNLETTQNSVSTGYRVDTASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A M AIDV+ IK+K+ A E G D +Q EI+QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYTAMDSAIDVVDEIKSKLVAATEDGVDKSKVQEEISQLQEQLM 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA+ +SF+GENW+ G+ + +
Sbjct: 121 SIAQSASFSGENWVAGADGTKSVVSS 146
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 52/96 (54%), Positives = 73/96 (76%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ +S I++ + T+A ++GSIS+RI LQEDF+ + D+++ GVGRLVDADM
Sbjct: 207 TTGQIQSALSTIESALSAMTSAGAQLGSISTRIDLQEDFVGALSDSIDSGVGRLVDADME 266
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
ES++LSALQTQQQLA+Q+LSI N+S+ ILSLFRG
Sbjct: 267 EESSKLSALQTQQQLAIQSLSIANSSSQNILSLFRG 302
>gi|256830152|ref|YP_003158880.1| flagellin domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256579328|gb|ACU90464.1| flagellin domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 315
Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 73/207 (35%), Gaps = 3/207 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N AM+A++ L NL R+SSGLR++ AAD+AA +I ++M++D +L+
Sbjct: 3 LVINHNLMAMNANRNLASAYGNLSTSVSRLSSGLRITTAADDAAGLAIRELMRADIASLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K T I SE Q+ S+
Sbjct: 63 QGVRNANDAISMIQTADGALGVIDEKLIRMKELATQAATGTYNSDQRLIIDSEYQQMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG L +L +++ ++ + +
Sbjct: 123 ITRIANATDFNGIYLLNGNLSATSTGVSSWASSHDGSALASTGPLKIHFGTGNDSAEDYY 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKD 205
G L +
Sbjct: 183 YIAIGNSTASALGVGNASDRTKANGTH 209
Score = 95.6 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 44/108 (40%)
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ + + + +E ++ ++ I +G++ +R+ +++ +
Sbjct: 205 ANGTHGVASGGYSISTQQGAQEALAALNAAITSKDNIRASLGALQNRLENTITNLQIQAE 264
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
++ R+ DAD+A+E T Q Q AV LS N+ L L
Sbjct: 265 NLQAAESRISDADIATEMTNFVRNQILTQSAVAMLSQANSLPQMALQL 312
>gi|37695562|gb|AAR00324.1| flagellin [Borrelia burgdorferi]
Length = 336
Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASGNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVRTAE 149
Score = 75.2 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/329 (10%), Positives = 84/329 (25%), Gaps = 1/329 (0%)
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A +S N + + I D G I+ + + +++
Sbjct: 9 AINASGNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSK 68
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ N + V + + N DQA
Sbjct: 69 AINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQA 128
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
+ + +A T + ++ + + V
Sbjct: 129 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
+ VA + + ++ + + + +
Sbjct: 189 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPAPATAPS-QGGVNSPVNVTTTVDAN 247
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E
Sbjct: 248 TSLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAA 307
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ A+ ++ N +LSL R
Sbjct: 308 TTNSILTPSAMAMIARANQVGQYVLSLLR 336
>gi|85712261|ref|ZP_01043312.1| Flagellin [Idiomarina baltica OS145]
gi|85693888|gb|EAQ31835.1| Flagellin [Idiomarina baltica OS145]
Length = 404
Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats.
Identities = 39/447 (8%), Positives = 108/447 (24%), Gaps = 49/447 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN L+ L VQ +++ ++ +D+ S + +
Sbjct: 3 ISTNLMFQRGLDSLQRSESALYKVQQQLTRQTKILSPSDDPIANSQVMNLNNALAQNEQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + ++A + + + V + ++ +L++ + +
Sbjct: 63 MRNSTSLEANLRQSEANLDGVNSGLQRARELAVGVVNGSYSADDRKAVAKELRAIEKQLV 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ G + S Q + +
Sbjct: 123 DQANARDAQGEYMFAGFQSRKEPMQYNASTQSYQYVSDQGARNIQLTPNLKLAANEPGSK 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ ++ ++ ++ VS + + ++ + A
Sbjct: 183 PFANVSQRVDINVESGQNLVGELRVSNREQFTDFTEQQQSNGNPRDFNISFDGAGNYSID 242
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + A + +G + + + SA+ ++
Sbjct: 243 DTSGNNLASGAITDGKISFNGMDITLAEDASPSASDTIQISNG----------------E 286
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ E + + +
Sbjct: 287 PIGRNPITLVSDLAAALEGKGTNGQWEDEASW---------------------------- 318
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ ++ + IG+ + + ++ + L D D T L
Sbjct: 319 ALDDLNKAMDNVVGTQADIGARMNVMESARTQLRDADVVNQTARAELADVDYNEAVTELV 378
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLF 450
+T Q + Q S +N LSLF
Sbjct: 379 KNETLYQASQQVFSRINQ-----LSLF 400
>gi|3851066|gb|AAC72199.1| flagellin [Pseudomonas putida]
Length = 277
Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 71/205 (34%), Gaps = 3/205 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN +++ + L + L R+SSGL+++ A D+AA IA M S +
Sbjct: 3 LTVNTNITSLGVQKNLNRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRMTSQIRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQ 118
G S A+ M + +++ ++ D ++ +E + +
Sbjct: 63 MAIKNANDGISIAQTAEGAMQEQTNILQRMRELAIQSRNSSNSKEDRDALNTEFNAMSDE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA + NG+N L + + S + I ++ + D +
Sbjct: 123 LTRIAESTQLNGKNLLNASATMTFQVGSNSGAENQIDIKLIDLKADALSVDSDAIAISGA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVL 203
+ + ++
Sbjct: 183 DDAENKTNFEKALSAIDDALQSINT 207
Score = 78.2 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
K E+ +S ID ++ +G+ +R+ + ++ + + E GR+ D D A
Sbjct: 187 NKTNFEKALSAIDDALQSINTTRADLGAAQNRLTSTINNLQNINENAEAARGRVQDTDFA 246
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARIL 447
+E+ +L+ QT QQ + L+ N +L
Sbjct: 247 AETAQLTKQQTLQQASTSVLAQANQLPQSVL 277
>gi|34499334|ref|NP_903549.1| flagellin [Chromobacterium violaceum ATCC 12472]
gi|34105185|gb|AAQ61541.1| flagellin [Chromobacterium violaceum ATCC 12472]
Length = 282
Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 77/219 (35%), Gaps = 3/219 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN S++ A L L R+SSGLR++ A D+AA +I+Q + S +
Sbjct: 4 TVNTNTSSLQAQLNLNGSQMALSRSLQRLSSGLRINSAKDDAAGLAISQTLTSAIRGNNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
+ G S A+ + + + + I+ T+ +Q+E+ QL ++
Sbjct: 64 AVNNANDGISVGQTAEGALGQIANNLQRIREIAVQASNGSVSNTNRSQLQNEVDQLTQEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I + + FNG + L + + + + + + + + +
Sbjct: 124 SRIVQTTQFNGTSLLSGSAVLTFQVGSSGASSNQVSVSSVDMTSAGVLCSYNSSLTNTGT 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+ ++ + + + +
Sbjct: 184 ISVLSQGSASAVLSSLDHDIAAISNVRSTWGSVQNRFDA 222
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 42/110 (38%)
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ + T + + + ++S +D I + GS+ +R ++
Sbjct: 173 SYNSSLTNTGTISVLSQGSASAVLSSLDHDIAAISNVRSTWGSVQNRFDAVVANLQNYVQ 232
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ R++D D ASE+ L+ Q QQ L N+ L+L +
Sbjct: 233 NLTAANSRILDVDFASETANLTKNQILQQAGSSILKQANSLPQAALTLLQ 282
>gi|14278890|dbj|BAB58981.1| flagellin [Bacillus subtilis]
Length = 280
Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 76/205 (37%), Gaps = 10/205 (4%)
Query: 9 SAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
+A++ +L N +++SSGLR++ A D+AA +I++ M+ L S
Sbjct: 1 AALNTLNRLSSNNSASSKNMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLEMASKNSQ 60
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS----KSIQSEITQLQSQL----- 119
G S + A+ +++ ++ ++ + GT ++IQ EI+ L ++
Sbjct: 61 DGISLIQTAEGALTETHSILQRVRELVVQAGNTGTQDGTDLQAIQDEISSLVEEIGGGTN 120
Query: 120 -RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
I+ + FNG+ L + IG+ + + +
Sbjct: 121 ANGISDRTEFNGKKLLNGAFSEDSGKSLTFQIGANGSQQLSVNIESMAATAIGALDDDGN 180
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVL 203
D T + + + +
Sbjct: 181 LVADQTVAKIDVTKFADNAADTATV 205
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 40/96 (41%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
++ +++T+ A+ A + + + +D I + K+G++ +R+ + +
Sbjct: 185 QTVAKIDVTKFADNAADTATVGFDAQLKTVDDAINTVSKQRSKLGAVQNRLEHTINNLSA 244
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ + R+ D DMA E + + Q +
Sbjct: 245 SGENLTAAESRIRDVDMAKEMSEFTKNNILSQASQA 280
>gi|308198491|pdb|3K8W|A Chain A, Crysatl Structure Of A Bacterial Cell-Surface Flagellin
N20c45
Length = 326
Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 73/181 (40%), Gaps = 3/181 (1%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
+L R+SSGLR++ A D+AA +I+ M + L+ G S A+
Sbjct: 1 TQNSLSTSLQRLSSGLRINSAKDDAAGLAISDRMTAQIKGLTQAQRNANDGISLAQTAEG 60
Query: 80 GMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+ + + + I+ TD ++Q+E+TQLQS+++ +A +SFNG+ L
Sbjct: 61 ALGEISNNLQRIRELAVQASNGTNTQTDRDALQAEVTQLQSEIQRVAEQTSFNGQKLLDG 120
Query: 137 DLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
I + + Q ++ L T +D++ + + I
Sbjct: 121 SFNGVQFQIGANAGETIGVSKIMNAQTASLGGSLTRTTSTIDATDLTKYDTAMAAGDLTI 180
Query: 197 K 197
Sbjct: 181 N 181
Score = 51.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/307 (7%), Positives = 67/307 (21%)
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
+ + + + + + G S A A+ +G +
Sbjct: 13 SSGLRINSAKDDAAGLAISDRMTAQIKGLTQAQRNANDGISLAQTAEGALGEISNNLQRI 72
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
++ D+ + + + K +D S I
Sbjct: 73 RELAVQASNGTNTQTDRDALQAEVTQLQSEIQRVAEQTSFNGQKLLDGSFNGVQFQIGAN 132
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ S + + +G V
Sbjct: 133 AGETIGVSKIMNAQTASLGGSLTRTTSTIDATDLTKYDTAMAAGDLTINGVDVGKIDAAS 192
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+ + + T + + + +
Sbjct: 193 TAQERAAQLTEAINRVSSQTNVGASYDKTTGQVTLTSNAAIAVAGAANDATVAGWANNAT 252
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T T N+ + ++ ++ ID +K A +G++ +R ++ M
Sbjct: 253 TGTATTTTGINSLTVSSFTNAQQTITQIDNALKDINTARADLGAVQNRFTSTVANLQSMT 312
Query: 401 DAVEKGV 407
+ + +
Sbjct: 313 ENLSSAL 319
>gi|218231678|ref|YP_002366444.1| A-type flagellin [Bacillus cereus B4264]
gi|218159635|gb|ACK59627.1| A-type flagellin [Bacillus cereus B4264]
Length = 266
Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 59/169 (34%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M++ Q L + + V + +++G ++++A+DN A +I M + +
Sbjct: 3 IGTNVLSMNSRQSLYENEKRMNVAMEHLATGKKLNNASDNPANIAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + ++++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVMNILQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T + Q
Sbjct: 123 YIGETTEFNDLSVFDGQNRPVTLDDIGHTVHISKSIPPSPTQHDIKIST 171
Score = 94.0 bits (231), Expect = 5e-17, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 69/239 (28%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T +
Sbjct: 27 MEHLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVMNI 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + T T + + + L
Sbjct: 87 LQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + ++ + + + + + I+ ++ + +G++ +R
Sbjct: 147 DIGHTVHISKSIPPSPTQHDIKISTEQEARAAIRKIEEALQSVSLHRADLGAMINRFKFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 207 IENLNSQSIALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSKLLQ 265
>gi|13560152|emb|CAC36206.1| flagelline [Treponema maltophilum]
Length = 274
Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 73/196 (37%), Gaps = 3/196 (1%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
SAM + + L N +++SSG++++ A D+A+ +++ M+S L+
Sbjct: 1 MSAMYSXRVLGVTNLAQAKDMEKLSSGMKINRAGDDASGLAVSGKMRSQIRGLNQALRNA 60
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
G S + +++ + + D+M I+ D IQ E++QL +++ IA
Sbjct: 61 QNGISFIQVSEGYLQETTDIMHRIRELAVQSSNGIYSDEDRMQIQVEVSQLVAEVDRIAS 120
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ FNG N L +T + N ++ + V +
Sbjct: 121 HAQFNGMNMLTGRFARATGENTVTGSMWLHIGANMDQRMQVFIGTMTAMAVGVRDIGSEK 180
Query: 185 ERYGLLDRNHKIKVEP 200
+ +
Sbjct: 181 VMSIAAPDDANRAIGT 196
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 31/93 (33%)
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
+ + ID +K +G+ +R+ + + + + + + D
Sbjct: 182 MSIAAPDDANRAIGTIDEGLKKINKQRADLGAHQNRLEMTVKGLDVAAENTQAAESTIRD 241
Query: 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445
DMA + + + Q L+ N +T
Sbjct: 242 TDMAKQMVDFTKNRILAQAGTAMLAQANVTTQN 274
>gi|144193|gb|AAA23021.1| flagellin [Campylobacter coli]
Length = 572
Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 72/179 (40%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + L+ R+SSGLR++ AAD A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANSDLNSRALDQSLSRLSSGLRINSAADVASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T E G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAEDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+IA +SFNG+ L + I S + L+ T
Sbjct: 125 NIANTTSFNGKQLLSGGFTNQEFQIGSSSNQTIKASIGATQSSKIGVTRLNRFTKFSSG 183
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 66/206 (32%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
I A G + + + + + G+ + S + +
Sbjct: 367 GQISAANADAMGFNAYNGGGAKQIIFASSIAGFMSQAGSGFSAGSGFSVGSGKNYSAILS 426
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+++ V + T + S ++ ++ H T ++
Sbjct: 427 ASIQIVSSAASISSTYVVSTGSGFSAGSGNSQFAALRISTVSAHDETAGVTTLKGAMAVM 486
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+T I IGS+ ++I + I + + V+ ++ D D ASES S
Sbjct: 487 DIAETAITNLDQIRADIGSVQNQITSTINNITVTQVNVKSAESQIRDVDFASESANYSKA 546
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q A++ N+S +L L +
Sbjct: 547 NILAQSGSYAMAQANSSQQNVLRLLQ 572
>gi|206558520|ref|YP_002229280.1| flagellin [Burkholderia cenocepacia J2315]
gi|198034557|emb|CAR50422.1| flagellin (type II) [Burkholderia cenocepacia J2315]
Length = 384
Score = 106 bits (263), Expect = 9e-21, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 93/265 (35%), Gaps = 3/265 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +I+ M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQNALSQAITRLSSGKRINSAADDAAGLAISTRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ G S + A + +S + + I+ TD ++Q E++Q
Sbjct: 61 NQGVSNANDGVSMIQTASSALSSLTNSLQRIRQLAVQASTGTMSTTDQAALQQEVSQQIQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG N L G + + +V + D + + I L + +
Sbjct: 121 EVNRIASQTTYNGTNILDGSAGIVSFQVGANVGQTISLDLSQSMSAAKIGGGLVQKGQTV 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ T + + + Y + + S A
Sbjct: 181 GTVTGLSLDNNGAYTGSGATITAINVLSDGKGGYTFTDQNGGAISQTVAQSVFGANATTG 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTT 262
T + A +A T
Sbjct: 241 TGTAVGNLTLQSGATGAGTSAAQQT 265
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/284 (9%), Positives = 70/284 (24%)
Query: 168 YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+ + + + + D + + +
Sbjct: 101 GTMSTTDQAALQQEVSQQIQEVNRIASQTTYNGTNILDGSAGIVSFQVGANVGQTISLDL 160
Query: 228 SGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
S + A KG V + T + + +V +
Sbjct: 161 SQSMSAAKIGGGLVQKGQTVGTVTGLSLDNNGAYTGSGATITAINVLSDGKGGYTFTDQN 220
Query: 288 WVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT 347
+ + + + + S ++ + +N
Sbjct: 221 GGAISQTVAQSVFGANATTGTGTAVGNLTLQSGATGAGTSAAQQTAITNAIAQINAVNKP 280
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
+ + + ID ++ +G+ +R + +
Sbjct: 281 ATVSNLDISTVSGANVAMVSIDNALQTVNNVQAALGAAQNRFTAIATSQQAESTDLSSAQ 340
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ DA+ A E+ +S Q QQ + L+ N+ ++L L +
Sbjct: 341 SQITDANFAQETANMSKHQVLQQAGISVLAQANSLPQQVLKLLQ 384
>gi|435005|emb|CAA53012.1| flagellin [Borrelia anserina]
Length = 334
Score = 106 bits (263), Expect = 9e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNGINATNLSKTQEKLSSGYRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSAAQNVRTAE 149
Score = 80.6 bits (196), Expect = 6e-13, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 39/101 (38%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ + +G+ +R+ +D + + ++ ++
Sbjct: 234 SPINVITAVDANMSLAKIEDAIRMVSDQRANLGAFQNRLESIKDSTEYAIENLKASYAQI 293
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DA M E + Q A+ ++ N +LSL R
Sbjct: 294 KDATMTDEIVASTTNSILTQSAMAMIAQANQVPQYVLSLLR 334
>gi|87242334|gb|ABD33706.1| flagellin [Bacillus thuringiensis serovar dakota]
Length = 326
Score = 106 bits (263), Expect = 9e-21, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 54/127 (42%), Gaps = 3/127 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGISLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++ E L+ Q+ I+ + FN + L
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTNENQAALNKEFDALKEQIDYISTNTEFNDKKLLDGSN 120
Query: 139 GSSTASI 145
Sbjct: 121 TEIAIQT 127
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 33/70 (47%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ IDT +K + +G+ +R+ + +K ++ ++ DADMA E + ++
Sbjct: 257 AIASIDTALKNIASNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMT 316
Query: 424 ALQTQQQLAV 433
+ + +
Sbjct: 317 KFKILNEAGI 326
>gi|4210944|gb|AAD12053.1| flagellin [Burkholderia cepacia]
gi|4210946|gb|AAD12054.1| flagellin [Burkholderia cepacia]
Length = 383
Score = 106 bits (263), Expect = 9e-21, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 95/265 (35%), Gaps = 3/265 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +I+ M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQNALSQAITRLSSGKRINSAADDAAGLAISTRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ G S + A + +S + + I+ TD ++Q E++Q
Sbjct: 61 NQGVSNANDGVSMIQTASSALSSLTNSLQRIRQLAVQASTGTMSTTDQAALQQEVSQQIQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG N L G + + +V + D + + I L + +
Sbjct: 121 EVNRIASQTTYNGTNILDGSAGIVSFQVGANVGQTISLDLSQSMSAAKIGGGLVQKGQTV 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ T + + + + Y + + S A
Sbjct: 181 GTVTGLSLDNAGAYTSSGAAITAINVLSDGKGGYTFTDQNGGAISQTVAQSVFGANATTG 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTT 262
T + + A +A T
Sbjct: 241 TGTEVGNLTLQTGATGAGTSAAQQT 265
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/283 (9%), Positives = 71/283 (25%)
Query: 168 YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+ + + + + D + + +
Sbjct: 101 GTMSTTDQAALQQEVSQQIQEVNRIASQTTYNGTNILDGSAGIVSFQVGANVGQTISLDL 160
Query: 228 SGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
S + A KG V + A TS + + +V +
Sbjct: 161 SQSMSAAKIGGGLVQKGQTVGTVTGLSLDNAGAYTSSGAAITAINVLSDGKGGYTFTDQN 220
Query: 288 WVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT 347
+ + + + + S ++ + +N
Sbjct: 221 GGAISQTVAQSVFGANATTGTGTEVGNLTLQTGATGAGTSAAQQTAITNAIAQINAVNKP 280
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
+ + + ID ++ +G+ +R + +
Sbjct: 281 ATVSNLDISTVSGANVAMVSIDNALQTVNNVQAALGAAQNRFTAIATSQQAESTDLSSAQ 340
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
++ DA+ A E+ +S Q QQ + L+ N+ ++L L
Sbjct: 341 SQITDANFAQETANMSKNQVLQQAGISVLAQANSLPQQVLKLL 383
>gi|87242346|gb|ABD33712.1| flagellin [Bacillus thuringiensis serovar brasilensis]
Length = 343
Score = 106 bits (263), Expect = 9e-21, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + K++ E + L+ Q+ I++ + FN + L +
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTDDNQKALDKEFSALKEQIDYISKNTEFNDKKLLNGEN 120
Query: 139 GSSTASI 145
+
Sbjct: 121 KTIAIQT 127
Score = 70.2 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 32/70 (45%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ ID+ ++ + +G+ +R+ + +K ++ ++ DADMA E + ++
Sbjct: 274 AIKAIDSALESIASNRATLGATLNRLDFNVNNLKSQSSSMAAAASQIEDADMAKEMSEMT 333
Query: 424 ALQTQQQLAV 433
+ + +
Sbjct: 334 KFKILNEAGI 343
>gi|1311442|dbj|BAA11608.1| flagellin protein [Borrelia duttonii]
Length = 328
Score = 106 bits (263), Expect = 9e-21, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNAINVANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + + + V+ +K D SIQ E+ QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLDEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEVEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNHMHMLSNRSSAEHVRTAE 149
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 33/94 (35%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ T +G+ +R+ + + + ++ ++
Sbjct: 235 SPVNVTTAVDANMSLTKIEDAIRMITDQRANLGAFQNRLESVKASTEYAIENLKASYAQI 294
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
DA M E + Q A+ ++ N
Sbjct: 295 KDATMTDEIVASTTNSILTQSAMAMIAQANQVPQ 328
>gi|114054852|gb|ABI50026.1| FlaA [Clostridium botulinum]
Length = 255
Score = 106 bits (263), Expect = 9e-21, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 26 VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAI 85
+++SSGLR++ A D+AA +I++ M+ L+ S S + A+ +++
Sbjct: 6 KAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQASRNSQDAISLIQTAEGALNETH 65
Query: 86 DVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSST 142
++ ++ D +++Q E+ +LQS++ I+ + FN ++ + +
Sbjct: 66 SILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEINRISSQTQFNTKSLINGAVSXDA 125
Query: 143 ASIA 146
++
Sbjct: 126 XAMT 129
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 44/136 (32%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
D + T + + I + + + + ++ ID I
Sbjct: 120 AVSXDAXAMTFQIGANSGQTIKLTIGSMDAKTLXVDXIKLDDTAANVTKQIATIDNAINS 179
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ K+G+ +R+ + + ++ R+ D DMA E + Q A
Sbjct: 180 VSKERAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQA 239
Query: 435 ALSIVNNSTARILSLF 450
L+ N + +L L
Sbjct: 240 MLAQANQAPQGVLQLL 255
>gi|326792651|ref|YP_004310472.1| flagellin domain protein [Clostridium lentocellum DSM 5427]
gi|326543415|gb|ADZ85274.1| flagellin domain protein [Clostridium lentocellum DSM 5427]
Length = 269
Score = 106 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/256 (14%), Positives = 84/256 (32%), Gaps = 3/256 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA+++ +++ + +++SSGLR++ A D+AA +I++ M++ L+
Sbjct: 3 INHNMSAINSQRQMYKTSTAQAKASEKLSSGLRINRAGDDAAGLAISEKMRAQVRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S G S + A+ M + ++ ++ +D + Q E+TQL ++
Sbjct: 63 SRNAQDGISLIQTAEGAMDEQHSMLQRMRELAVQASNETYTASDRANAQLEVTQLVQEIS 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FN L S A + +++ S+
Sbjct: 123 AITDKTEFNTNKLLAAASKFSFQVGANKAQTITVSMKAMTATALSVNSASVSTISKAQSA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D ++ + + + + + + + K
Sbjct: 183 LDSIDKAINTVSQQRAVFGAVQNRLEHTIQNVDNSSENLQSAESRIHDTDMAKEMMEFTR 242
Query: 241 QAKGIATIPVPLPAAP 256
L A
Sbjct: 243 TNVLSQATQAMLAQAN 258
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 45/140 (32%)
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
NT+ + S + + N+ + + + + ID
Sbjct: 130 FNTNKLLAAASKFSFQVGANKAQTITVSMKAMTATALSVNSASVSTISKAQSALDSIDKA 189
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I + G++ +R+ + + ++ R+ D DMA E + Q
Sbjct: 190 INTVSQQRAVFGAVQNRLEHTIQNVDNSSENLQSAESRIHDTDMAKEMMEFTRTNVLSQA 249
Query: 432 AVQALSIVNNSTARILSLFR 451
L+ N ++LSL +
Sbjct: 250 TQAMLAQANQKPNQVLSLLQ 269
>gi|2589158|dbj|BAA23224.1| flagellin protein [Borrelia recurrentis]
gi|51243478|gb|AAT99443.1| flagellin [Borrelia recurrentis]
Length = 328
Score = 106 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNAINVANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + + + V+ +K D SIQ E+ QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLDEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEVEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNHMHMLSNRSSAEHVRTAE 149
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 33/94 (35%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ T +G+ +R+ + + + ++ ++
Sbjct: 235 SPVNVTTAVDANMSLTKIEDAIRMITDQRANLGAFQNRLESVKASTEYAIENLKASYAQI 294
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
DA M E + Q A+ ++ N
Sbjct: 295 KDATMTDEIVASTTNSILTQSAMAMIAQANQVPQ 328
>gi|39363|emb|CAA45011.1| flagellin [Borrelia burgdorferi]
gi|483495|emb|CAA49320.1| p41 [Borrelia burgdorferi]
Length = 336
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNAINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQITGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVKTAE 149
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/208 (10%), Positives = 55/208 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
S + + +
Sbjct: 189 IYSANVANLFAGEGAQAAQAAPVQEGAQEEGAQQPTPATAPTQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+ ++ N +LSL R
Sbjct: 309 TNSILTQSAMAMIAQANQVPQYVLSLLR 336
>gi|115381326|gb|ABI96346.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Bovismorbificans]
Length = 220
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAK 147
+ A
Sbjct: 121 NTLTIQVGAN 130
>gi|5668676|dbj|BAA82630.1| flagellin protein [Borrelia valaisiana]
Length = 336
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNRSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSAAQNVKTAE 149
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/332 (9%), Positives = 86/332 (25%), Gaps = 1/332 (0%)
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
A +S N + + I D G I+ + + +
Sbjct: 6 NRSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRN 65
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ + N + V + + + N
Sbjct: 66 TSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIA 125
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
DQA+ + +A T + ++ + + V
Sbjct: 126 DQAQYNQMHMLSNKSAAQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAI 185
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ VA + + ++ + + + +
Sbjct: 186 AVNIYAANVANLFSGEGAQSAQAAPVQEGAQQEGAQQPAPATAPA-QGGVNSPVNVTTTV 244
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E
Sbjct: 245 DANTSLAKIENAIRMVSDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEV 304
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q A+ ++ N +LSL R
Sbjct: 305 VAATTNSILTQSAMAMIAQANQVPQYVLSLLR 336
>gi|46580848|ref|YP_011656.1| flagellin [Desulfovibrio vulgaris str. Hildenborough]
gi|120601838|ref|YP_966238.1| flagellin domain-containing protein [Desulfovibrio vulgaris DP4]
gi|46450268|gb|AAS96916.1| flagellin [Desulfovibrio vulgaris str. Hildenborough]
gi|120562067|gb|ABM27811.1| flagellin domain protein [Desulfovibrio vulgaris DP4]
gi|311234550|gb|ADP87404.1| flagellin domain protein [Desulfovibrio vulgaris RCH1]
Length = 297
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/204 (23%), Positives = 76/204 (37%), Gaps = 3/204 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N AM+A+ L + L R+SSGLRV AAD+AA +I ++M+SD AL+
Sbjct: 3 LVINHNMMAMNAAGNLSNSYGKLSTSVRRLSSGLRVGTAADDAAGLAIRELMRSDISALN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K I SE + S+
Sbjct: 63 QGVRNANDAISLIQTADGALGVIDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG + L +L S T + ++ G + DYY
Sbjct: 123 ITRIANATDFNGLHLLNGNLSSDTHDGSGLQSTGKMKIHFGTANDSAEDYYYVQIGTSTA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQV 202
S+ + + I +
Sbjct: 183 SALGVGNQATAGSAGYTISTQSAA 206
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 62/202 (30%)
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
AA + AS +D +++SD + +
Sbjct: 96 AEQAATGTYTSDQRLIIDSEYQAMASEITRIANATDFNGLHLLNGNLSSDTHDGSGLQST 155
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
++ + D + V T + + + A ++ + I
Sbjct: 156 GKMKIHFGTANDSAEDYYYVQIGTSTASALGVGNQATAGSAGYTISTQSAAQQALVAIQN 215
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
I +G++ +R+ ++ + ++ R+ D D++SE T Q Q
Sbjct: 216 AIISKDNIRASLGALQNRLENTISNLRTQAENLQSAESRISDVDVSSEMTEFVRQQILTQ 275
Query: 431 LAVQALSIVNNSTARILSLFRG 452
AV LS N+ + L G
Sbjct: 276 SAVAMLSQANSLPRMAMQLLGG 297
>gi|1311422|dbj|BAA11598.1| flagellin protein [Borrelia turdi]
gi|1311424|dbj|BAA11599.1| flagellin protein [Borrelia turdi]
gi|1311426|dbj|BAA11600.1| flagellin protein [Borrelia turdi]
Length = 329
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSSSQNVRTAE 149
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 17/201 (8%), Positives = 53/201 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSSSQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + + +
Sbjct: 189 IYAANVANLFSGEGAQSAQAAPVQEGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTA 444
Q A+ ++ N
Sbjct: 309 TNSILTQSAMAMIAQANQVPQ 329
>gi|242280466|ref|YP_002992595.1| flagellin domain protein [Desulfovibrio salexigens DSM 2638]
gi|242123360|gb|ACS81056.1| flagellin domain protein [Desulfovibrio salexigens DSM 2638]
Length = 290
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 3/150 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N AM AS+ L++ NL R+SSGLRV AAD+AA +I ++M++D +L+
Sbjct: 3 LVINHNLMAMHASRNLQEAYGNLGTSTRRLSSGLRVGTAADDAAGLAIRELMRADVKSLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K T I SE + S+
Sbjct: 63 QGMRNANDAISMIQTADGALQVIDEKLIRMKELATQASTGTYNSDQRLIIDSEFQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKS 148
+ IA + FNG + L +L T + +
Sbjct: 123 ITRIANATDFNGIHLLNGNLSGGTGAHNGN 152
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 45/123 (36%)
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRI 389
+ E ++ + + + + ++ + + I +G++ +R+
Sbjct: 168 NDSAEDYYYIAIGESTASALGVQTSISTQALAQQALDKLQQAIISKDKIRANLGAMQNRL 227
Query: 390 HLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
+ + + V+ R+ D D+A+E T Q Q AV LS N+ + L
Sbjct: 228 ENTITNLSIQAENVQAAESRISDVDVATEMTEFVRNQILTQSAVAMLSQANSLPKMAMQL 287
Query: 450 FRG 452
G
Sbjct: 288 IGG 290
>gi|332295025|ref|YP_004436948.1| flagellin domain protein [Thermodesulfobium narugense DSM 14796]
gi|332178128|gb|AEE13817.1| flagellin domain protein [Thermodesulfobium narugense DSM 14796]
Length = 553
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 42/257 (16%), Positives = 91/257 (35%), Gaps = 4/257 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN SAM A+ L + + +++S+GLR++ AAD+ A +I+ +++ L
Sbjct: 5 INTNVSAMQANYNLSQTSNAMSSSLEKLSTGLRINSAADDPAGLTISNTLQAQIKGLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD----SKSIQSEITQLQSQL 119
G + + A +++ +++ +++ + + ++ Q +I S L
Sbjct: 65 IQNSNDGINMIQTAAGALTEVTNLIQSMRTLAVSASNTAVNDVASRQADQYQINSAISSL 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++IA ++F L + G +T + I S + + + + +
Sbjct: 125 KNIAATTAFGNVKLLNGNFGYNTQITTPNDITSMGVAASATNVPYIGNISMQIKQQATQA 184
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G G V + + I+ T++ A ANA
Sbjct: 185 YMTGAFSTGTYASGTGGTVTFSINTLDSAGNIINTQAITATIGSADTSAQALQDIANAIN 244
Query: 240 DQAKGIATIPVPLPAAP 256
+ A
Sbjct: 245 QFSGTTNVFAATSSAGY 261
Score = 75.9 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/196 (12%), Positives = 62/196 (31%), Gaps = 1/196 (0%)
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
A + SGT S + +VA++A+ + T V +
Sbjct: 358 AVTQSGSGTGISGTVAVASAASGELSATFATTANPNWTTAQGVLNTGTGVNVGVLAKNSA 417
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
+ + + + + + + + +D +
Sbjct: 418 TFQIGANAGQLVSMVINNLTPDALGFSAGLGESVSQINVQTLSGAQNAIQVLDAANTEIS 477
Query: 377 AAAGKIGSIS-SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
A +G+ + + + + + + + + D +MA+E T + LQ + +
Sbjct: 478 VIASSLGAFQTNTLQSNVNSLSIAQINLSASNAAIQDTNMAAEMTNFTRLQILMKSGIAM 537
Query: 436 LSIVNNSTARILSLFR 451
LS N + +L+L +
Sbjct: 538 LSQANQIPSALLTLLQ 553
>gi|86360666|ref|YP_472554.1| flagellin C protein [Rhizobium etli CFN 42]
gi|86284768|gb|ABC93827.1| flagellin C protein [Rhizobium etli CFN 42]
Length = 302
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 82/146 (56%), Positives = 102/146 (69%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN+SAM+A Q LR IN NLE Q+ VS+G RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNNSAMAALQTLRSINSNLETTQNSVSTGYRVDTASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A M AIDV+ IK K+ A E G D +Q EI+QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYTAMDSAIDVVDEIKAKLVAATEDGVDKSKVQEEISQLQEQLM 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA+ +SF+GENW+ G+ + +
Sbjct: 121 SIAQSASFSGENWVAGADGTKSVVSS 146
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/96 (53%), Positives = 73/96 (76%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ ++ I++ + T+A ++GSIS+RI LQEDF+ + D+++ GVGRLVDADM
Sbjct: 207 TTGQIQSALTTIESALSAMTSAGAQLGSISTRIDLQEDFVGALSDSIDSGVGRLVDADME 266
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
ES++LSALQTQQQLA+Q+LSI N+S+ ILSLFRG
Sbjct: 267 EESSKLSALQTQQQLAIQSLSIANSSSQNILSLFRG 302
>gi|301385725|ref|ZP_07234143.1| flagellin [Pseudomonas syringae pv. tomato Max13]
gi|302059414|ref|ZP_07250955.1| flagellin [Pseudomonas syringae pv. tomato K40]
Length = 282
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 78/221 (35%), Gaps = 3/221 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA IA + S +
Sbjct: 3 LTVNTNVASLNVQKNLGRASDALSTSMTRLSSGLKINSAKDDAAGLQIATKITSQIRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S A+ + ++ +++ ++ TD ++ E T + S+
Sbjct: 63 MAIKNANDGMSLAQTAEGALQESTNILQRMRELAVQFRNDSNSSTDRDALNKEFTAMSSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA+ ++ NG+N L + T + + S + +
Sbjct: 123 LTRIAQSTNLNGKNLLDGSASTMTFQVGSNSGSSNQITLTLSASFDANTLGVGSAVTIAG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
S + +E + + ST
Sbjct: 183 SDSTTSETNFSAAIAAIDSALQTINSTRADLGAAQNRLTST 223
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 58/138 (42%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + S + + ++ + A +D+ + ++ ID+ ++
Sbjct: 145 MTFQVGSNSGSSNQITLTLSASFDANTLGVGSAVTIAGSDSTTSETNFSAAIAAIDSALQ 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R+ ++ + + +GR+ D D A+E+ +L+ QT QQ +
Sbjct: 205 TINSTRADLGAAQNRLTSTISNLQNINENASAALGRVQDTDFAAETAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 SVLAQANQLPSAVLKLLQ 282
>gi|190895629|ref|YP_001985921.1| flagellin C protein [Rhizobium etli CIAT 652]
gi|190699574|gb|ACE93658.1| flagellin C protein [Rhizobium etli CIAT 652]
Length = 302
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 82/146 (56%), Positives = 102/146 (69%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN+SAM+A Q LR IN NLE Q+ VS+G RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNNSAMAALQTLRSINSNLETTQNSVSTGYRVDTASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A M AIDV+ IK K+ A E G D +Q EI+QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYTAMDSAIDVVDEIKAKLVAATEDGVDKSKVQEEISQLQEQLM 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA+ +SF+GENW+ G+ + +
Sbjct: 121 SIAQSASFSGENWVAGADGTKSVVSS 146
Score = 92.1 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/96 (53%), Positives = 73/96 (76%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ ++ I++ + T+A ++GSIS+RI LQEDF+ + D+++ GVGRLVDADM
Sbjct: 207 TTGQIQSALTTIESALSAMTSAGAQLGSISTRIDLQEDFVGALSDSIDSGVGRLVDADME 266
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
ES++LSALQTQQQLA+Q+LSI N+S+ ILSLFRG
Sbjct: 267 EESSKLSALQTQQQLAIQSLSIANSSSQNILSLFRG 302
>gi|42522197|ref|NP_967577.1| flagellin [Bdellovibrio bacteriovorus HD100]
gi|39574728|emb|CAE78570.1| flagellin [Bdellovibrio bacteriovorus HD100]
gi|54632921|emb|CAH64681.1| flagellin [Bdellovibrio bacteriovorus]
Length = 274
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 64/153 (41%), Gaps = 3/153 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L E ++SG R+ +AAD+AA +I++ K +
Sbjct: 5 IATNTASIAAQRVLSKQQKRAEHAAQALASGSRIVNAADDAAGLAISENFKGQLKGIGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ S V +++ G+++ +++ ++ T+ + + E QL +
Sbjct: 65 RNNANNAISFVQVSEGGLNEVSNILVRLRELGVQAASDTVSDTEREFLNKETQQLIQEAD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
IA+ + F + L G+ + +
Sbjct: 125 RIAKTTVFGTKKMLDGTAGAMEFQVGAYSDENN 157
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 46/137 (33%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ + D I + + ++ A ++ + +D I
Sbjct: 137 MLDGTAGAMEFQVGAYSDENNVIKFEFDADSTAAALGIDSIAMADRGDARASLEQVDQAI 196
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ + G++ SR+ + + + + R+ D D+A E+ +++ Q A
Sbjct: 197 EKVSGMRANFGAMQSRMESAVSNLDVSYENLSAANSRIRDTDVAKETAEMTSASILQNTA 256
Query: 433 VQALSIVNNSTARILSL 449
V L+ N + L
Sbjct: 257 VSVLAQANQLPQVAMKL 273
>gi|254228810|ref|ZP_04922233.1| lateral flagellin LafA [Vibrio sp. Ex25]
gi|262396471|ref|YP_003288324.1| flagellin protein flaA [Vibrio sp. Ex25]
gi|151938757|gb|EDN57592.1| lateral flagellin LafA [Vibrio sp. Ex25]
gi|262340065|gb|ACY53859.1| flagellin protein flaA [Vibrio sp. Ex25]
Length = 281
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/251 (15%), Positives = 86/251 (34%), Gaps = 3/251 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN++++ L + + L +R+S+G R++ AAD+AA IA +++ ++
Sbjct: 3 LSMHTNYASLVTQNTLNNTSGLLNTAMERLSTGYRINSAADDAAGLQIATRLEAQTRGMN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S + A+ M + ++ + + T D ++ +E QL S+
Sbjct: 63 VAMRNAQDGISMMQTAEGAMDEMTNITYRMNDLATQSLNGSNSQEDRAALDAEFKQLASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L +I +SF G+ L G +S+ + + + D +
Sbjct: 123 LGNIMENTSFGGQKLLAEGGGFGASSVTYQIGATGAEKLAVNAKTQLNDISTAIAGLTSI 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
S+ + + + T + + K
Sbjct: 183 STAAAASTALANLSSSGGMLADLGTARAQFGANINRLEHTMTNLGNMTENTSAAKGRITD 242
Query: 239 FDQAKGIATIP 249
D A + +
Sbjct: 243 ADFATESSNMT 253
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 33/81 (40%)
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ A + G+ +R+ + M + GR+ DAD A+ES+ ++ Q Q
Sbjct: 201 MLADLGTARAQFGANINRLEHTMTNLGNMTENTSAAKGRITDADFATESSNMTKNQMLMQ 260
Query: 431 LAVQALSIVNNSTARILSLFR 451
LS N +SL R
Sbjct: 261 AGTTVLSKTNQLPGMAMSLLR 281
>gi|206603520|gb|EDZ40000.1| Putative flagellin [Leptospirillum sp. Group II '5-way CG']
Length = 286
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/224 (16%), Positives = 79/224 (35%), Gaps = 3/224 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN +++ A L L +R+SSG RV+ AD+ A ++I Q+M S ++
Sbjct: 4 LVINTNTASLGAQYNLNATQDRLNRSINRLSSGYRVNTPADDPAGYAIGQVMNSYVKSVQ 63
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKS---IQSEITQLQSQ 118
G+ + + D++ ++ + +Q+E L S+
Sbjct: 64 QAIRNAHDGAGLIQTTNGALLTDNDILVKMRQLAIQAANSTYAPEDLSVLQNEYQHLMSE 123
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA ++FNG L + + S R I++ + +VL+
Sbjct: 124 INRIALVTNFNGRKVLDGSMMNGMVFQIDSGTDDTNRLVVSIPSISSDVLGIYQNSVLVM 183
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
S + + + ++ + + + +
Sbjct: 184 SLGATSIMNESMAISAISAIDGAMAELNTIQGTLGAFQERMTWT 227
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 32/96 (33%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +S ID + G +G+ R+ + V+ ++ D +
Sbjct: 190 IMNESMAISAISAIDGAMAELNTIQGTLGAFQERMTWTIRNLNTALVNVQASKSQIKDVN 249
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
ASE+ + QQ + LS N + L
Sbjct: 250 FASETANFVKNRILQQSSTAVLSQANQIPQAAVKLI 285
>gi|149189854|ref|ZP_01868134.1| lateral flagellin LafA [Vibrio shilonii AK1]
gi|148836340|gb|EDL53297.1| lateral flagellin LafA [Vibrio shilonii AK1]
Length = 288
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN++++ L + N L +R+S+G R++ AAD+AA I+ ++S ++
Sbjct: 3 LSMHTNYASLVTQNTLNNTNGLLNTAMERLSTGYRINSAADDAAGLQISTRLESQTRGMN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G S + A+ M + +++ + + T D ++ E QL +
Sbjct: 63 VAMRNAQDGISMMQTAEGAMDEMTNIVYRMNDLATQASNGSASTADKTALNKEFQQLNEE 122
Query: 119 LRDIARGSSFNGENWLRTDL 138
L +I ++F G+ T
Sbjct: 123 LVNIMDSTNFGGQKLFNTTG 142
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 30/80 (37%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ G+ +R+ + M + GR+ DAD A ES+ ++ Q Q
Sbjct: 209 LADIGTTRSSFGANINRLEHTIVNLGNMVENTSAAKGRITDADFAVESSNMTKNQMLMQA 268
Query: 432 AVQALSIVNNSTARILSLFR 451
LS N +SL R
Sbjct: 269 GTTVLSQTNQLPGMAMSLLR 288
>gi|124516720|gb|EAY58228.1| putative flagellin [Leptospirillum rubarum]
Length = 286
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 79/224 (35%), Gaps = 3/224 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN +++ A L L +R+SSG RV+ AD+ A ++I Q+M S ++
Sbjct: 4 LVINTNTASLGAQYNLNATQDRLNRSINRLSSGYRVNTPADDPAGYAIGQVMNSYVKSVQ 63
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKS---IQSEITQLQSQ 118
G+ + + D++ ++ + +Q+E L S+
Sbjct: 64 QAIRNAHDGAGLIQTTNGALLTDNDILVKMRQLAIQAANSTYAPEDLSVLQNEYQHLMSE 123
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA ++FNG L + + S R I+T + +VL+
Sbjct: 124 INRIALVTNFNGRKVLDGSMMNGMVFQIDSGTDDTNRLVVSIPSISTDVLGIYQNSVLVM 183
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
S + + + ++ + + + +
Sbjct: 184 SLGATSIMNESMAISAISAIDGAMAELNTIQGTLGAFQERMTWT 227
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 32/96 (33%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +S ID + G +G+ R+ + V+ ++ D +
Sbjct: 190 IMNESMAISAISAIDGAMAELNTIQGTLGAFQERMTWTIRNLNTALVNVQASKSQIKDVN 249
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
ASE+ + QQ + LS N + L
Sbjct: 250 FASETANFVKNRILQQSSTAVLSQANQIPQAAVKLI 285
>gi|261855239|ref|YP_003262522.1| flagellin domain protein [Halothiobacillus neapolitanus c2]
gi|261835708|gb|ACX95475.1| flagellin domain protein [Halothiobacillus neapolitanus c2]
Length = 287
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 3/142 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ LR ++ R+S+GLR++ A D+AA +I+ M +
Sbjct: 1 MNVINTNILSLQTQNALRANGNAMQTAMQRLSTGLRINSAKDDAAGLAISDRMTTQINGS 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ + G S A+ M + +++ +D +++Q+E QLQS
Sbjct: 61 NVAARNANDGISLAQTAEGAMGALTSTLQRMRDLAVQSANATNSTSDRQNLQTEFVQLQS 120
Query: 118 QLRDIARGSSFNGENWLRTDLG 139
+L I + FNG+N L+ L
Sbjct: 121 ELGRIIGNTQFNGKNVLQGGLS 142
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 49/142 (34%)
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ + + + + + + + + +S ID
Sbjct: 146 NAKFQVGANTGATNQIAFSINNQSARGTASGGIKSALANTVSIGSKATFTKIMSGISLID 205
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
I K+G++ +R + D + + R++D + A+E++ LS Q Q
Sbjct: 206 KAITSIDTTRAKLGAVQNRFQITIDNLNTFVVNQSQARSRILDTNFAAETSNLSKAQILQ 265
Query: 430 QLAVQALSIVNNSTARILSLFR 451
Q L+ N + +LSL R
Sbjct: 266 QAGNAMLTQANQAPQAVLSLLR 287
>gi|229096244|ref|ZP_04227217.1| Flagellin [Bacillus cereus Rock3-29]
gi|228687204|gb|EEL41109.1| Flagellin [Bacillus cereus Rock3-29]
Length = 263
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 55/154 (35%), Gaps = 3/154 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + + + +++G +++ A+DN A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNIAMEHLATGKKLNHASDNPANVAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDALSMLRTAEAALQTVTNILQRMRDLAVQSANDTNSNKNRDSLNKEFQSLTEQVG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
I + FN T +
Sbjct: 123 YIGATTEFNDLFVFDGQSRPITLDDIGHTVHHIP 156
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/240 (10%), Positives = 69/240 (28%)
Query: 212 DASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
K + + + V + A + +
Sbjct: 23 MNIAMEHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDALSMLRTAEAALQT 82
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
+ + KN + + + + T + D +
Sbjct: 83 VTNILQRMRDLAVQSANDTNSNKNRDSLNKEFQSLTEQVGYIGATTEFNDLFVFDGQSRP 142
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
D G+++ + + + + + + I+ ++ + +G++ +R+H
Sbjct: 143 ITLDDIGHTVHHIPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGAMINRLHF 202
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 203 NIENLNSQSMALTDASSRIEDADMAQEMSDFLKFKLLTKVALSMVSQANQIPQMVSKLLQ 262
>gi|229172405|ref|ZP_04299964.1| Flagellin [Bacillus cereus MM3]
gi|228610876|gb|EEK68139.1| Flagellin [Bacillus cereus MM3]
Length = 266
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 54/136 (39%), Gaps = 3/136 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A+DN A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNHASDNPANVAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDALSMLRTAEAALQTVTNILQRMRDLAVQSVNDTNSHKNRDSLNKEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRT 136
I + FN +
Sbjct: 123 YIGETTEFNDLSVFDG 138
Score = 96.3 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 28/239 (11%), Positives = 70/239 (29%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T + +
Sbjct: 27 MEHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDALSMLRTAEAALQTVTNI 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ +D + T T + + L
Sbjct: 87 LQRMRDLAVQSVNDTNSHKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQHRPVTLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ M + + + + + + I+ ++ + +G++ +R+
Sbjct: 147 DIGHTVNIMKHIPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGAMMNRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 207 IENLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSKLLQ 265
>gi|217972607|ref|YP_002357358.1| flagellin domain-containing protein [Shewanella baltica OS223]
gi|217497742|gb|ACK45935.1| flagellin domain protein [Shewanella baltica OS223]
Length = 274
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 69/163 (42%), Gaps = 3/163 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +++ A + L L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSLKAQKNLNSSATGLASSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S I++ M + +++ +++ +D +I+SE+ L +++
Sbjct: 64 GMRNANDAISIAQISEGAMQEQTNMLQRMRDLTIQAENGSNSTSDIGAIKSELDALATEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
IA ++F L D + G I+ KV
Sbjct: 124 TAIANTTAFGNTKLLNGDFSAGKTFQVGHQNGEDIKISVSKVT 166
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 61/206 (29%)
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
I + + A T+ + ++ A + +
Sbjct: 69 NDAISIAQISEGAMQEQTNMLQRMRDLTIQAENGSNSTSDIGAIKSELDALATEITAIAN 128
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
+ + T ++ S + I +A+ +
Sbjct: 129 TTAFGNTKLLNGDFSAGKTFQVGHQNGEDIKISVSKVTASAIKVNASVILVSTAGQRSTS 188
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ ID IK K+G++ +R+ + V R+VD D A E+++++
Sbjct: 189 LTNIDAAIKTIDNQRAKLGAVQNRLAYNISNSANTQANVADAKSRIVDVDFAKETSQMTK 248
Query: 425 LQTQQQLAVQALSIVNNSTARILSLF 450
Q QQ L+ N LSL
Sbjct: 249 NQVLQQTGSAMLAQANQLPQVALSLL 274
>gi|157418965|gb|ABV55185.1| flagellin [uncultured Borrelia sp.]
Length = 330
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNSINAANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSSAQNIKTAE 149
Score = 73.2 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 19/165 (11%), Positives = 47/165 (28%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G+ W + + N A V N + + +
Sbjct: 166 GSQASWTLRVHVGANQDEAIAVNIYAANVANLFAGEGAQVSPAQEGAQQEGVQAAPAPAA 225
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + +S I+ I+ + +G+ +R+ + + +
Sbjct: 226 APAQGGVNSPVNVTTTVDANMSLSKIENAIRMVSDQRANLGAFQNRLESIKASTEYAIEN 285
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
++ ++ DA M E + Q A+ ++ N +L
Sbjct: 286 LKSSYAQIKDATMTDEIVASTTNSILTQSAMAMIAQANQVPQYVL 330
>gi|6691461|dbj|BAA89304.1| flagellin [Leptospira sp.]
Length = 248
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 26/236 (11%), Positives = 69/236 (29%), Gaps = 3/236 (1%)
Query: 23 NLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82
++ +SSG+R + AAD+A+ ++++ +++ L G S + A+ +
Sbjct: 3 AVDKTMKALSSGMRFNSAADDASGLAVSEKLRTQINGLRQAERNTEDGMSFIQTAEGFLE 62
Query: 83 KAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
+ +++ I+ D + +Q E++ L ++ IA + FN
Sbjct: 63 QTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVDRIASQAEFNKFKLFEGQFA 122
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + ++ + I T+ + D
Sbjct: 123 RGSRVASMWFHMGPNQNQRERFFIGTMTSKALKLVKADGRPIAISSPGEANDVIGLADAA 182
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + + L + + D + +
Sbjct: 183 LTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDADMAEEVVSLTTKQI 238
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 30/83 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ D + +G+ +R+ + + ++ R+ DAD
Sbjct: 166 ISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDAD 225
Query: 415 MASESTRLSALQTQQQLAVQALS 437
MA E L+ Q Q L+
Sbjct: 226 MAEEVVSLTTKQILVQSGTAMLA 248
>gi|300117319|ref|ZP_07055109.1| flagellin [Bacillus cereus SJ1]
gi|298725154|gb|EFI65806.1| flagellin [Bacillus cereus SJ1]
Length = 266
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 55/138 (39%), Gaps = 3/138 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G ++++A+DN A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNNASDNPANIAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDL 138
I + FN +
Sbjct: 123 YIGETTEFNDLSVFDGQN 140
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 27/239 (11%), Positives = 69/239 (28%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T + +
Sbjct: 27 MEHLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNI 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + T T + + + L
Sbjct: 87 LQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + I+ ++ + +G++ +R+
Sbjct: 147 DIGHTVNITKHIPPSPTEHDINISTEQEARAAIRKIEEALQSVSLHRADLGAMMNRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N I L +
Sbjct: 207 IENLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMISKLLQ 265
>gi|1580777|emb|CAA67103.1| flagellin [Pseudomonas aeruginosa]
Length = 333
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 37/97 (38%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ + V ID IK A +G++ +R + +K + + V
Sbjct: 237 NDTVAKIDISTAKGAQSAVLVIDEAIKQIDAQRADLGAVKNRFDNTINNLKNIGENVSAA 296
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
GR+ D D A+E+ L+ Q QQ L+ N
Sbjct: 297 RGRIEDTDFAAETANLTKNQVLQQAGTAILAQANQLP 333
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/214 (9%), Positives = 59/214 (27%), Gaps = 3/214 (1%)
Query: 46 YWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERG 102
IA + S L+ + G S A+ + ++ +++ +++
Sbjct: 1 GLQIANRLTSQVNGLNVATKNANDGISLAQTAEGALQQSTNILQRMRDLSLQSANGSNSD 60
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
++ ++ E+ QLQ +L I+ ++F G L G ++ + + +
Sbjct: 61 SERTALNGEVKQLQKELDRISNTTTFGGRKLLDGSFGVASFQVGSAANEIISVGIDEMSA 120
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
+ Y + ++ + + + + +
Sbjct: 121 ESLNGTYFKADGGGAVTAATASGTVDIAIGITGGSAVNVKVDMKGNETAEQAAAKIAAAV 180
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
A +K A +
Sbjct: 181 NDANVGIGAFTDGEHISYVSKASADGTSSAVSGV 214
>gi|78356752|ref|YP_388201.1| flagellin [Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|78219157|gb|ABB38506.1| flagellin [Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
Length = 297
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 72/204 (35%), Gaps = 3/204 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N AM+A++ L + L R+SSGLRV AAD+AA +I ++M++D +
Sbjct: 3 LVINHNMMAMNATRNLSESYGRLATSTRRLSSGLRVGTAADDAAGLAIRELMRADISTMQ 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K I+SE + S+
Sbjct: 63 QGIRNANDAISMIQTADGALQVIDEKLIRMKELAEQAATGTYNSDQRLMIESEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG + L L + G+ + YY+
Sbjct: 123 ITRIAMATDFNGIHLLNGTLSGTHDGTGLQQTGAMKIHFGTGNDSSEDYYYIKIAGSTAS 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQV 202
G + + + I +
Sbjct: 183 MLGIGNQADPRVAGGYTISTQSAA 206
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 79/297 (26%)
Query: 156 DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASG 215
+ T R R + L ++ D S
Sbjct: 1 MSLVINHNMMAMNATRNLSESYGRLATSTRRLSSGLRVGTAADDAAGLAIRELMRADIST 60
Query: 216 TISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAA 275
+ S K I + AA N+ A
Sbjct: 61 MQQGIRNANDAISMIQTADGALQVIDEKLIRMKELAEQAATGTYNSDQRLMIESEYQAMA 120
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
S +D +++ T H+ +S+ +
Sbjct: 121 SEITRIAMATDFNGIHLLNGTLSGTHDGTGLQQTGAMKIHFGTGNDSSEDYYYIKIAGST 180
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
S + R A + + A + ++ ID I +G++ +R+
Sbjct: 181 ASMLGIGNQADPRVAGGYTISTQSAAQGALTAIDQAIISKDKIRASLGALQNRLENTITN 240
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + + ++ R+ D D+A+E T + Q Q AV L+ N+ + L G
Sbjct: 241 LSIQSENLQASESRISDVDVATEMTEFTRNQILTQSAVAMLTQANSLPQMAMQLIGG 297
>gi|239905037|ref|YP_002951776.1| flagellin [Desulfovibrio magneticus RS-1]
gi|239794901|dbj|BAH73890.1| flagellin [Desulfovibrio magneticus RS-1]
Length = 297
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 75/181 (41%), Gaps = 3/181 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I +N A +A++ L + L R+SSGLR++ AAD+AA +I ++M++D +++
Sbjct: 3 LTINSNLMAANAARNLSNSYSALATSTQRLSSGLRINSAADDAAGLAIRELMRADIASIN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K I SE + S+
Sbjct: 63 QGVRNANDAISMIQTADGALQVIDEKLIRMKELAEQASTGTYTSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG L +L ST S A ++ G ++ DYY
Sbjct: 123 ITRIANATDFNGIYLLNGNLSGSTHSGAGINSSGKLKVHFGSGNESSEDYYYVQIGTSTA 182
Query: 179 S 179
S
Sbjct: 183 S 183
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 50/135 (37%)
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
++ D + + + + + + + ++ + I+ I
Sbjct: 163 GSGNESSEDYYYVQIGTSTASALGLGIGAASGNDGRSISTQQMAQKALEAINDAIVSKDK 222
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G++ +R+ +++ + ++ ++ D D+A+E T+ Q Q AV LS
Sbjct: 223 IRANLGALQNRLENTISNLQIQSENLQAAESQISDVDVATEMTQFVRNQILTQSAVAMLS 282
Query: 438 IVNNSTARILSLFRG 452
N+ + L G
Sbjct: 283 QANSMPRMAMQLIGG 297
>gi|239905888|ref|YP_002952627.1| flagellin [Desulfovibrio magneticus RS-1]
gi|239795752|dbj|BAH74741.1| flagellin [Desulfovibrio magneticus RS-1]
Length = 299
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 3/181 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N A +A++ L + L R+SSGLR++ AAD+AA +I ++M++D A++
Sbjct: 3 LVINHNMMAANAARNLSNSYGALATSTQRLSSGLRINTAADDAAGLAIRELMRADISAIN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K I SE + S+
Sbjct: 63 QGVRNANDAISMIQTADGALQVIDEKLIRMKELAEQASTGTYTSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG L +L +T + S ++ G ++ DYY
Sbjct: 123 ITRIANATDFNGIYLLNGNLSGATHDGSTSTSTGKMKVHFGSGNESSEDYYYVQIGTSTA 182
Query: 179 S 179
S
Sbjct: 183 S 183
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 48/142 (33%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ + S + + + + + + + + + I
Sbjct: 158 MKVHFGSGNESSEDYYYVQIGTSTASAFGLGIGAASSTDQAGRSISTQELAQLALDAIKD 217
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
I +G++ +R+ +++ + ++ ++ D D+A+E T+ Q Q
Sbjct: 218 AIVSKDKIRANLGALQNRLENTISNLQIQAENLQAAESQISDVDVATEMTQFVRNQILTQ 277
Query: 431 LAVQALSIVNNSTARILSLFRG 452
AV LS N+ + L G
Sbjct: 278 SAVAMLSQANSMPKMAMQLIGG 299
>gi|152975174|ref|YP_001374691.1| flagellin [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152023926|gb|ABS21696.1| flagellin domain protein [Bacillus cytotoxicus NVH 391-98]
Length = 271
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 42/240 (17%), Positives = 92/240 (38%), Gaps = 3/240 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M+++ G L+
Sbjct: 3 INTNINSMRTQEYMRQNQEKMNTSMNRLSSGKSINSAADDAAGLAIATRMRANEGGLNVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S G S + A + ++ +++ +++ TD K++Q E TQL Q+
Sbjct: 63 SRNSQDGKSMIQTADSALNTVSNILLRMRDLAVQSANGTNSTTDRKALQKEFTQLTDQIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ + FNG + + + + I + + +++ D+
Sbjct: 123 YISKNTQFNGTDLMSDSASTINIKSTDASKADTINIELKTINASSLQINNSKIESASDAD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + ++ + + + +T A+ A +
Sbjct: 183 TAISAIDKAINSIADHRATLGATLNRLDYNIENLNNQATAMASSASQIEDADMAKEMSEM 242
Score = 86.7 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 48/154 (31%)
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
T Y + G + + S + + + N
Sbjct: 118 TDQINYISKNTQFNGTDLMSDSASTINIKSTDASKADTINIELKTINASSLQINNSKIES 177
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ +S ID I +G+ +R+ + + A+ ++ DADMA
Sbjct: 178 ASDADTAISAIDKAINSIADHRATLGATLNRLDYNIENLNNQATAMASSASQIEDADMAK 237
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + ++ + + V LS N + + L +
Sbjct: 238 EMSEMTKFKILSEAGVSMLSQANQTPQMVSKLLQ 271
>gi|939810|dbj|BAA09680.1| flagellin protein [Borrelia afzelii]
gi|939812|dbj|BAA09681.1| flagellin protein [Borrelia afzelii]
Length = 329
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNAINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVKTAE 149
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 17/201 (8%), Positives = 50/201 (24%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
S + + +
Sbjct: 189 IYSANVANLFAGEGAQAAQAAPVQEGAQEEGAQQPTPATAPTQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTA 444
Q A+ ++ N
Sbjct: 309 TNSILTQSAMAMIAQANQVPQ 329
>gi|1311428|dbj|BAA11601.1| flagellin protein [Borrelia japonica]
gi|1311430|dbj|BAA11602.1| flagellin protein [Borrelia japonica]
Length = 329
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMAVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVKTAE 149
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 17/201 (8%), Positives = 53/201 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 189 IYAANVANLFSGEGAQTAQAAPVQEGIQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMVSDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTA 444
Q A+ ++ N
Sbjct: 309 TNSILTQSAMAMIAQANQVPQ 329
>gi|149176412|ref|ZP_01855026.1| flagellin [Planctomyces maris DSM 8797]
gi|148844764|gb|EDL59113.1| flagellin [Planctomyces maris DSM 8797]
Length = 602
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 73/185 (39%), Gaps = 4/185 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN +++ + L L+ R+S+GL+++ DN + ++ ++S A+
Sbjct: 1 MTRINTNVASLRGLRSLNKSTNLLDTSLTRLSTGLKINSGKDNPSGLIASETLRSQVSAI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE----RGTDSKSIQSEITQLQ 116
S+ + A + + + ++++ ++ + G+ + + Q +I
Sbjct: 61 EQSIKNSNRASNVIATADSALGEVTNLLNQVRGLVQEGLNEGALSQDEIAANQLQIDTAL 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
S + I+ +SF G+ + T S A N V ++ LD V
Sbjct: 121 SAINRISANTSFAGDKLIDGSKAFRTQSSAADSAKLSDFQVNEAVFGSSSSITLDATIVT 180
Query: 177 LDSST 181
+
Sbjct: 181 AATQA 185
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSIS-SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++V+ I+ + + G++G+I + I + + + + + ++VD D A E+
Sbjct: 513 DLVNIIEEAVNRVSTLRGRLGAIQKNVIETNVSSLGVALENISEARSQIVDTDFAVETAN 572
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ Q Q + LSI N + ++LSL R
Sbjct: 573 LTKAQILNQAGISVLSIANQNPQQVLSLLR 602
>gi|222144096|dbj|BAH19240.1| flagellin [uncultured Leptospira sp.]
gi|222144106|dbj|BAH19245.1| flagellin [uncultured Leptospira sp.]
gi|222144108|dbj|BAH19246.1| flagellin [uncultured Leptospira sp.]
gi|222144110|dbj|BAH19247.1| flagellin [uncultured Leptospira sp.]
gi|222144112|dbj|BAH19248.1| flagellin [uncultured Leptospira sp.]
gi|222144114|dbj|BAH19249.1| flagellin [uncultured Leptospira sp.]
gi|222144116|dbj|BAH19250.1| flagellin [uncultured Leptospira sp.]
gi|222144118|dbj|BAH19251.1| flagellin [uncultured Leptospira sp.]
gi|222144120|dbj|BAH19252.1| flagellin [uncultured Leptospira sp.]
gi|225878729|dbj|BAH30681.1| flagellin [uncultured Leptospira sp.]
Length = 230
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 68/228 (29%), Gaps = 3/228 (1%)
Query: 31 VSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMST 90
+SSG+R++ AAD+A+ ++++ +++ L G S + A+ + + +++
Sbjct: 1 LSSGMRINSAADDASGLAVSEKLRTQINGLRQAERNTEDGMSFIQTAEGFLEQTSNIIQR 60
Query: 91 IKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
I+ D + +Q E++ L ++ IA + FN + +
Sbjct: 61 IRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVDRIASQAEFNKFKLFEGQFARGSRVASM 120
Query: 148 SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
++ + I T+ + D +
Sbjct: 121 WFHMGPNQNQRERFYIGTMTSKALKLVKADGRPIAISSPGEANDVIGLADAALTRIMKQR 180
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + L + + D + +
Sbjct: 181 ADMGAYYNRLEYTAKGLMGAYENMQASESRIRDADMAEEVVSLTTKQI 228
Score = 69.8 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 27/74 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ D + +G+ +R+ + + ++ R+ DAD
Sbjct: 156 ISSPGEANDVIGLADAALTRIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDAD 215
Query: 415 MASESTRLSALQTQ 428
MA E L+ Q
Sbjct: 216 MAEEVVSLTTKQIL 229
>gi|116688265|ref|YP_833888.1| flagellin [Burkholderia cenocepacia HI2424]
gi|162218046|ref|YP_622735.2| flagellin [Burkholderia cenocepacia AU 1054]
gi|116646354|gb|ABK06995.1| flagellin domain protein [Burkholderia cenocepacia HI2424]
Length = 384
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 93/265 (35%), Gaps = 3/265 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +I+ M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQNALSQAITRLSSGKRINSAADDAAGLAISTRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ G S + A + +S + + I+ TD ++Q E++Q
Sbjct: 61 NQGVSNANDGVSMIQTASSALSSLTNSLQRIRQLAVQASTGTMSTTDQAALQQEVSQQIQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG N L G + + +V + D + + I L + +
Sbjct: 121 EVNRIASQTTYNGTNILDGSAGIVSFQVGANVGQTISLDLSQSMSAAKIGGGLVQKGQTV 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ T + + + Y + + S A
Sbjct: 181 GTVTGLSLDNNGAYTGSGATITAINVLSDGKGGYTFTDQNGGAISQTVAQSVFGANATTG 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTT 262
T + A +A T
Sbjct: 241 TGTAVGNLTLQSGATGAGTSAAQQT 265
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/284 (9%), Positives = 70/284 (24%)
Query: 168 YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+ + + + + D + + +
Sbjct: 101 GTMSTTDQAALQQEVSQQIQEVNRIASQTTYNGTNILDGSAGIVSFQVGANVGQTISLDL 160
Query: 228 SGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
S + A KG V + T + + +V +
Sbjct: 161 SQSMSAAKIGGGLVQKGQTVGTVTGLSLDNNGAYTGSGATITAINVLSDGKGGYTFTDQN 220
Query: 288 WVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT 347
+ + + + + S ++ + +N
Sbjct: 221 GGAISQTVAQSVFGANATTGTGTAVGNLTLQSGATGAGTSAAQQTAITNAINQINAVNKP 280
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
+ + + ID ++ +G+ +R + +
Sbjct: 281 ATVSNLDISTVSGANVAMVSIDNALQTVNNVQAALGAAQNRFTAIATSQQAESTDLSSAQ 340
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ DA+ A E+ +S Q QQ + L+ N+ ++L L +
Sbjct: 341 SQITDANFAQETANMSKNQVLQQAGISVLAQANSLPQQVLKLLQ 384
>gi|28901403|ref|NP_801058.1| lateral flagellin LafA [Vibrio parahaemolyticus RIMD 2210633]
gi|153835978|ref|ZP_01988645.1| flagellin [Vibrio parahaemolyticus AQ3810]
gi|260362957|ref|ZP_05775826.1| flagellin protein [Vibrio parahaemolyticus K5030]
gi|260880244|ref|ZP_05892599.1| flagellin protein [Vibrio parahaemolyticus AN-5034]
gi|260895361|ref|ZP_05903857.1| flagellin protein [Vibrio parahaemolyticus Peru-466]
gi|260901186|ref|ZP_05909581.1| flagellin protein [Vibrio parahaemolyticus AQ4037]
gi|29611960|sp|Q03473|FLAL_VIBPA RecName: Full=Lateral flagellin
gi|28809950|dbj|BAC62891.1| lateral flagellin LafA [Vibrio parahaemolyticus RIMD 2210633]
gi|149750732|gb|EDM61477.1| flagellin [Vibrio parahaemolyticus AQ3810]
gi|308085738|gb|EFO35433.1| flagellin protein [Vibrio parahaemolyticus Peru-466]
gi|308092380|gb|EFO42075.1| flagellin protein [Vibrio parahaemolyticus AN-5034]
gi|308109386|gb|EFO46926.1| flagellin protein [Vibrio parahaemolyticus AQ4037]
gi|308112478|gb|EFO50018.1| flagellin protein [Vibrio parahaemolyticus K5030]
gi|328469337|gb|EGF40283.1| lateral flagellin LafA [Vibrio parahaemolyticus 10329]
Length = 284
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 3/148 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN++++ L + L +R+S+G RV+ A+D+AA IA +++ +S
Sbjct: 3 LSMHTNYASLVTQNTLNSTSGLLNTAMERLSTGFRVNSASDDAAGLQIANRLEAQTRGMS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S + A+ M + ++ + + T D ++ +E QL ++
Sbjct: 63 VAMRNAQDGISMMQTAEGAMEEMTNITYRMNDLATQSLNGSNSDKDRAAMDAEFKQLSAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIA 146
L +I +SF G+ L G ++
Sbjct: 123 LNNIMGNTSFGGQKLLAAGGGFEAGAVT 150
Score = 84.0 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 3/100 (3%)
Query: 355 YNEKLAMEEMVSFIDTQ---IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ + + I I+ A + G+ +R+ + M + GR++
Sbjct: 185 IGDATKAKAALDKISDAGGLIEDIGATRAQFGANINRLEHTMTNLGNMVENTSAAKGRIM 244
Query: 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DAD A ES+ ++ Q Q LS N + +SL R
Sbjct: 245 DADFAVESSNMTKNQMLMQAGTTVLSKTNQLPSMAMSLLR 284
>gi|168187556|ref|ZP_02622191.1| flagellin [Clostridium botulinum C str. Eklund]
gi|169294610|gb|EDS76743.1| flagellin [Clostridium botulinum C str. Eklund]
Length = 277
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N ++++ ++ + + + +R+SSG +++ A +N ++++ M+ L
Sbjct: 3 LNHNMASLTICREQEKVWGSQSMYMNRISSGFKINSAKENPNGLALSEKMRVQIRGLQIA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG--VERGTDSKSIQSEITQLQSQLRD 121
G S + A + ++ ++ D K++QSEI Q+ + D
Sbjct: 63 QRNAQDGMSMLQAADGALEGVQSMLIRVRELTIEAGGATSENDRKALQSEINQMVDGIND 122
Query: 122 IARGSSFNGENW 133
S FNG++
Sbjct: 123 TLTHSDFNGKSI 134
Score = 83.3 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 34/96 (35%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+E+ + +D + + GK G++ +R + + + D + ++ D D+A
Sbjct: 180 NTDDIEKYLEVVDNAVDKISDIRGKYGALCNRFEGTYNEVHEIHDTIVGTESKIRDTDVA 239
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
L+ + L N L + G
Sbjct: 240 EAMMNLARDNILIEAGQAMLVQSNKFPQDALRVLEG 275
>gi|1311436|dbj|BAA11605.1| flagellin protein [Borrelia lusitaniae]
Length = 329
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + S LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGFRINRASDDAAGMGVAGKINSQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVRTAE 149
Score = 73.6 bits (178), Expect = 7e-11, Method: Composition-based stats.
Identities = 19/201 (9%), Positives = 53/201 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 189 IYAANVANLFSGEGAQVAQTAPAQEGVQQEGAQQPAPATAPSQGGVNSPINVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+S I+ I+ + +G+ +R+ +D + + ++ ++ DA M E +
Sbjct: 249 SLSKIENAIRMVSDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTA 444
Q A+ ++ N
Sbjct: 309 TNSILTQSAMAMIAQANQVPQ 329
>gi|5107853|gb|AAD28526.2|AF128955_1 flagellin [Escherichia coli]
Length = 508
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/371 (12%), Positives = 102/371 (27%), Gaps = 6/371 (1%)
Query: 19 DINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAK 78
L +R+SSGLR++ A D+AA +IA S+ L+ + G S +
Sbjct: 1 KNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTE 60
Query: 79 AGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+S+ + + I+ +D SIQ EI ++ ++ + FNG N L
Sbjct: 61 GALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLA 120
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
D + + + + T + ++T T +
Sbjct: 121 KDGSMK-IQVGANDGQTITIELKKIDSDTLGLNGFNVNGKGETANTAATLKDMSGFTAAA 179
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ AS A + A A + +
Sbjct: 180 APGGTVGVTQYTDKSAVASSVDILNAVAGADGNKVTTSADVGFGTPAAAVTYTYNKDTNS 239
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
+A + ++ + + + + + + + +
Sbjct: 240 YSAASDDISSANLAAFLNPQARDTTKATVTIGGKDQDVNIDKSGNLTAADDGAVLYMDAT 299
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ + D++ L K + + T + M +T
Sbjct: 300 GNLTKNNAGGDTQATLAKVATATGAKAATIQTDKGTFTSDGTAFDGASMSIDANTFANAV 359
Query: 376 --TAAAGKIGS 384
+G+
Sbjct: 360 KNDTYTATVGA 370
Score = 72.5 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/294 (10%), Positives = 71/294 (24%)
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
S+ + + + + + +
Sbjct: 215 TTSADVGFGTPAAAVTYTYNKDTNSYSAASDDISSANLAAFLNPQARDTTKATVTIGGKD 274
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ + K +++ D + T + A A +
Sbjct: 275 QDVNIDKSGNLTAADDGAVLYMDATGNLTKNNAGGDTQATLAKVATATGAKAATIQTDKG 334
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ S S+ A+ + N K + T
Sbjct: 335 TFTSDGTAFDGASMSIDANTFANAVKNDTYTATVGAKTYSVTTGSAAADTAYMSNGVLSD 394
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
E + +V TD ++ + + ++ +D I
Sbjct: 395 TPPTYYAQADGSITTTEDAAAGKLVYKGSDGKLTTDTTSKAESTSDPLAALDDAISQIDK 454
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 455 FRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQA 508
>gi|307945678|ref|ZP_07661014.1| flagellin [Roseibium sp. TrichSKD4]
gi|307771551|gb|EFO30776.1| flagellin [Roseibium sp. TrichSKD4]
Length = 501
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 68/501 (13%), Positives = 146/501 (29%), Gaps = 51/501 (10%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I + + L+ + VQ+++++GL+V+ A DN + A + S G L
Sbjct: 1 MKDITLSAAVRQNLLTLQSTADLMSGVQNKLATGLKVNSALDNPNSFFTASGLNSRAGDL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQ 118
S + D +G + A G+ D++ T K K + + K+ + +L Q
Sbjct: 61 STLLDDMGQSLQTIKAADKGIQTITDLVETAKAKANQALQSQSQYERKTYAKQYNELLEQ 120
Query: 119 ------------------------------------LRDIARGSSFNGENWLRTDLGSST 142
+ + + +DL
Sbjct: 121 IEDVAKDSSYKGKNLLAGDGNDLTTIFNEDATSKLTIDAVDYTDTTLSGGLNLSDLAEGE 180
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
+ + + + + + + +
Sbjct: 181 GAATSFGLNGGSNTITFTDASGQVLNTASKLSEFTGIAVADVLQLFDDATTGAVVGGVSL 240
Query: 203 LKDIDVSVYD-------------ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIP 249
+V D S ++ + + + +A
Sbjct: 241 TVATGTTVQDLITELESAPGVRTEFDQTSGTLTIISNETADLRNNGASGANTGDLVAVTA 300
Query: 250 VPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ A + + S+ + D S
Sbjct: 301 AAAGSLGALLTDGASFKVGDTLSLTDGNNFELGSLEIEDDTTVRDLVEFLDDFNGVSASF 360
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
G + +++ + + S + + + + V ++
Sbjct: 361 NAGTGRVGLQSDTDLALTSDNNNFNSTSFGADTDGVTISALSDSGFATDNDINRAVDRLN 420
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
T + + A + G+ S + +++D+ K M + +++G G L AD E L ALQT+Q
Sbjct: 421 TALSNLRSQASEFGTNLSTVEIRKDYTKAMINTLQEGAGLLTLADTNEEGANLLALQTRQ 480
Query: 430 QLAVQALSIVNNSTARILSLF 450
QLA +LS + + +LSLF
Sbjct: 481 QLASTSLSFASQADQTVLSLF 501
>gi|218662349|ref|ZP_03518279.1| putative flagellin protein [Rhizobium etli IE4771]
Length = 302
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 82/146 (56%), Positives = 103/146 (70%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN+SAM+A Q LR IN NLE Q+ VS+G RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNNSAMAALQTLRSINSNLESTQNSVSTGYRVDTASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A M AIDV+ IK K+ A E G D +Q EI+QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYTAMESAIDVVDEIKAKLVAATEDGVDKSKVQEEISQLQEQLM 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA+ +SF+GENW+ + G+ + +
Sbjct: 121 SIAQSASFSGENWVAGESGTKSVVSS 146
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 52/96 (54%), Positives = 73/96 (76%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ +S I++ + T+A ++GSIS+RI LQEDF+ + D+++ GVGRLVDADM
Sbjct: 207 TTGQIQSALSTIESALSAMTSAGAQLGSISTRIELQEDFVSALSDSIDSGVGRLVDADME 266
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
ES++LSALQTQQQLA+Q+LSI N+S+ ILSLFRG
Sbjct: 267 EESSKLSALQTQQQLAIQSLSIANSSSQNILSLFRG 302
>gi|1311446|dbj|BAA11610.1| flagellin protein [Borrelia hermsii]
Length = 327
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNSINATNLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVERVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSAAQNVKTAE 149
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 18/162 (11%), Positives = 48/162 (29%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G+ W + + N + V N ++ + + +
Sbjct: 166 GSQASWTLRVHVGANQDEAIAVNIYASNVANLFAGEGAQAAPVQEIGQQEEGQAAPAPAA 225
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + ++ I+ I+ T +G+ +R+ +D + +
Sbjct: 226 APAQGGVNSPINVTTAVDANMSLAKIEGAIRMVTDQRANLGAFQNRLESIKDSTEYAIEN 285
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
++ ++ DA M E + Q A+ ++ N
Sbjct: 286 LKASYAQIKDATMTDEVVASTTHSILTQSAMAMIAQANQVPQ 327
>gi|87242442|gb|ABD33760.1| flagellin [Bacillus thuringiensis serovar iberica]
Length = 349
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + +
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ G + K++ E + L+ Q+ I++ + FN + L D
Sbjct: 61 NSVSNILLRMRDIANQSANGTNTGDNQKALDKEFSALKEQIDYISKNTEFNDKKLLNGDN 120
Query: 139 GSSTASI 145
S
Sbjct: 121 KSIAIQT 127
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 32/93 (34%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T D + ID + + +G+ +R+ + +K
Sbjct: 257 TTFKPDTMIKAGDITKSGPNASAAIKSIDAALDTIASNRATLGATLNRLDFNVNNLKSQS 316
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
++ ++ DADMA E + ++ + + +
Sbjct: 317 SSMASAASQIEDADMAKEMSEMTKFKILNEAGI 349
>gi|62866004|gb|AAY17152.1| flagellin [Borrelia parkeri]
gi|62866006|gb|AAY17153.1| flagellin [Borrelia parkeri]
gi|62866008|gb|AAY17154.1| flagellin [Borrelia parkeri]
gi|62866010|gb|AAY17155.1| flagellin [Borrelia parkeri]
gi|62866012|gb|AAY17156.1| flagellin [Borrelia parkeri]
Length = 334
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNSINAANLRKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSAAQNIKTAE 149
Score = 80.2 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 49/169 (28%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G W + + N + V N + + +
Sbjct: 166 GAQASWTLRVHVGANQDEAIAVNIYASNVANLFAGEGAQVSPAQEGAQQEGVQAAPAPAA 225
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + +S I+ I+ + +G+ +R+ + + +
Sbjct: 226 APAQGGVNSPVNVTTTVDANMSLSKIENAIRMVSDQRANLGAFQNRLESIKASTEYAIEN 285
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ ++ DA M E + Q A+ ++ N +LSL R
Sbjct: 286 LKSSYAQIKDATMTDEIVASTTNSILTQSAMAMIAQANQVPQYVLSLLR 334
>gi|87242400|gb|ABD33739.1| flagellin [Bacillus thuringiensis serovar japonensis]
Length = 333
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 79/236 (33%), Gaps = 3/236 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M+S G L+ + G S + A + +
Sbjct: 1 AKMSNSMDRLSSGKRINNASDDAAGLAIATRMRSREGGLNVAARNTEDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++Q E QL+ Q++ IA + FN + L
Sbjct: 61 NSVSNILLRMRDLANQSASGTNTDKNQAAMQKEFDQLKEQIQYIADNTEFNDKKLLDGSN 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ S + + D + + E + +
Sbjct: 121 NTINIQTLDSHDKTKQITISLDSASLKNLDIKDLAIGANTVNKNDLETLDNSMKRLEKPA 180
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
++ DV + + A A IA A
Sbjct: 181 TDGAVQAQDVKDAKNAFDKVKSGYSAADVEKMNDVFKAYDKALANPIADATANEAA 236
Score = 74.8 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 32/80 (40%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
V ID I+ ++ +G+ +R+ +K +++ ++ DA
Sbjct: 254 PTGAAFDPSSAVEKIDQAIEKIASSRATLGATLNRLDFNVTNLKSQENSMAASASQIEDA 313
Query: 414 DMASESTRLSALQTQQQLAV 433
DMA E + ++ + + +
Sbjct: 314 DMAKEMSEMTKFKILNEAGI 333
>gi|169950579|gb|ACB05821.1| flagellin [Clostridium botulinum]
Length = 241
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 26 VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAI 85
+++SSGLR++ A D+AA +I++ M+ L+ S G S + A+ +++
Sbjct: 5 KAMEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQASRNSQDGISLIQTAEGALNETH 64
Query: 86 DVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
++ ++ D +IQ E+T L S++ IA + FN +N L DLG
Sbjct: 65 SILQRMRELSVQAANDTNVTVDRDAIQKELTSLTSEIDRIATTTQFNEKNLLNGDLG 121
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 36/121 (29%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ + M + +T A ++ I+ IK
Sbjct: 121 GTTGAKLQIGANADTALTLEVKIAKMDSTALTITATNVKVGTNADATTSITNINNAIKEV 180
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ +G+ +R+ + + ++ R+ D DMA E S QQ A
Sbjct: 181 STQRSGLGAYQNRLEHTIANLDNASENLQAAESRVRDVDMAKEMMNFSKNNILQQAAQAM 240
Query: 436 L 436
L
Sbjct: 241 L 241
>gi|87242480|gb|ABD33779.1| flagellin [Bacillus cereus]
Length = 326
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGISLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++ E L+ Q+ I+ + FN + L
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTNENQAALNKEFDALKEQIDYISTNTEFNDKKLLDGSN 120
Query: 139 GSSTASI 145
+
Sbjct: 121 KTIAVQT 127
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 33/70 (47%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ IDT +K + +G+ +R+ + +K ++ ++ DADMA E + ++
Sbjct: 257 AIASIDTALKNIASNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMT 316
Query: 424 ALQTQQQLAV 433
+ + +
Sbjct: 317 KFKILNEAGI 326
>gi|77457754|ref|YP_347259.1| flagellin [Pseudomonas fluorescens Pf0-1]
gi|77381757|gb|ABA73270.1| flagellin [Pseudomonas fluorescens Pf0-1]
Length = 283
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/257 (16%), Positives = 91/257 (35%), Gaps = 3/257 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA IA M S +
Sbjct: 3 LTVNTNTTSLNVQKNLNRASDALSTSMQRLSSGLKINSAKDDAAGLQIATRMSSQIRGNT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQ 118
G S A+ + + D++ ++ G D + +E Q+ +
Sbjct: 63 QAIQNANDGISVAQTAEGALQASTDILQRMRELAVKARNGTNGTADQTATNAEFAQMSDE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ I+ ++ NG+N L G+ T + + + D + + TV+L
Sbjct: 123 ITRISAATNLNGKNLLDGSAGTVTLQVGANTGSANHIDLVLSGKFDAASLSVGSGTVVLT 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+T + + I + ++ + +++ L + A
Sbjct: 183 GATSAAAASNIDNAITAIDAAIANINATRAALGASQNRLTSTISNLQNITENTTAAQGRV 242
Query: 239 FDQAKGIATIPVPLPAA 255
D T +
Sbjct: 243 QDTDFAAETANLTKQQT 259
Score = 83.3 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 34/74 (45%)
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G+ +R+ ++ + + GR+ D D A+E+ L+ QT QQ + L+
Sbjct: 210 TRAALGASQNRLTSTISNLQNITENTTAAQGRVQDTDFAAETANLTKQQTLQQASTSVLA 269
Query: 438 IVNNSTARILSLFR 451
N + +L L +
Sbjct: 270 QANQLPSAVLKLLQ 283
>gi|283853574|ref|ZP_06370812.1| flagellin domain protein [Desulfovibrio sp. FW1012B]
gi|283571036|gb|EFC19058.1| flagellin domain protein [Desulfovibrio sp. FW1012B]
Length = 297
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 72/181 (39%), Gaps = 3/181 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N A +A++ L + L +R+SSGLR++ AAD+AA +I ++M+SD A +
Sbjct: 3 LVINHNMMAATAARNLSNSYSALATSTNRLSSGLRITTAADDAAGLAIRELMRSDIAATN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K I SE + S+
Sbjct: 63 QGVRNANDAISMIQTADGALQVVDEKLIRMKELAEQASTGTYTSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG L +L +T S + ++ G + DYY
Sbjct: 123 ITRIANATDFNGIYLLNGNLSGATHSGSGINSSGKLKVHFGSGNNSAEDYYYVQIGTSTA 182
Query: 179 S 179
S
Sbjct: 183 S 183
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 50/135 (37%)
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
++ D + V + A + + + ++ + I T I
Sbjct: 163 GSGNNSAEDYYYVQIGTSTASALGVGIGAASSAKGRSISTQELAQKALDAIKTAIVSKDK 222
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G++ +R+ +++ + ++ ++ D D+A+E T+ Q Q AV LS
Sbjct: 223 IRANLGALQNRLENTISNLQIQSENLQAAESQISDVDVATEMTQFVRNQILTQSAVAMLS 282
Query: 438 IVNNSTARILSLFRG 452
N+ + L G
Sbjct: 283 QANSLPRMAMQLIGG 297
>gi|115381316|gb|ABI96341.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Chester]
gi|115381332|gb|ABI96349.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Chester]
Length = 221
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 3/220 (1%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ A I Q +D + + ++ + Y +
Sbjct: 121 NTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQKAYDVSATDVISSTYSDGTQALTAP 180
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
++ + + FK
Sbjct: 181 TATEIKAALGNPTVTGDTLTAAVSFKDGKYYATVSGYPMR 220
>gi|116255719|ref|YP_771552.1| putative flagellin protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115260367|emb|CAK03471.1| flagellin. Expressed but not required for motility [Rhizobium
leguminosarum bv. viciae 3841]
gi|262283897|gb|ACY40758.1| FlaE [Rhizobium leguminosarum bv. viciae]
Length = 302
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 83/146 (56%), Positives = 102/146 (69%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN+SAMSA Q LR IN NLE Q+ VS+G RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNNSAMSALQTLRSINSNLETTQNSVSTGYRVDTASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A M AIDV+ IK K+ A E G D +Q EI+QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYTAMDSAIDVVDEIKAKLVAATEDGVDKSKVQEEISQLQEQLM 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA+ +SF+GENW+ G+ + +
Sbjct: 121 SIAQSASFSGENWVAGADGTMSVVSS 146
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 51/95 (53%), Positives = 72/95 (75%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ +S I++ + T+A ++GSIS+RI LQEDF+ + D+++ GVGRLVDADM
Sbjct: 207 TTGQIQSALSTIESALSAMTSAGAQLGSISTRIELQEDFVGALSDSIDSGVGRLVDADME 266
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ES++LSALQTQQQLA+Q+LSI N+S+ ILSLFR
Sbjct: 267 EESSKLSALQTQQQLAIQSLSIANSSSQNILSLFR 301
>gi|167564521|ref|ZP_02357437.1| flagellin [Burkholderia oklahomensis EO147]
gi|167571670|ref|ZP_02364544.1| flagellin [Burkholderia oklahomensis C6786]
Length = 389
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 84/205 (40%), Gaps = 3/205 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQSALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A +G++ + + I+ +D+ ++Q E++Q +
Sbjct: 61 NQGVSNANDGVSILQTASSGLTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVSQQIA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG+N L G+ + + +V + + + I + L
Sbjct: 121 EVNRIASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVNLTQSMSAAMIGGGMVQSGQTL 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQV 202
+ + G +
Sbjct: 181 GTLKVAVDASGAAWVAGTSTGQETT 205
Score = 87.1 bits (213), Expect = 6e-15, Method: Composition-based stats.
Identities = 45/386 (11%), Positives = 116/386 (30%), Gaps = 5/386 (1%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ ++ +++ +S+AI +S+ K + D + + T++Q+Q+ + +G
Sbjct: 9 NSLVAQQNLNGSQSALSQAITRLSSGK-----RINSAADDAAGLAIATRMQTQINGLNQG 63
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + SS + + + + +
Sbjct: 64 VSNANDGVSILQTASSGLTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVSQQIAEVN 123
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
R + + + V G + + ++ + +
Sbjct: 124 RIASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVNLTQSMSAAMIGGGMVQSGQTLGTL 183
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
AA A +T + + + ++ + A ++
Sbjct: 184 KVAVDASGAAWVAGTSTGQETTQINVLSDGKGGFTFTDQNNQALAAAAVTALFGATTAGT 243
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
T A V+ +T+ S D + +N + + + + + +
Sbjct: 244 GTAAAPAFQTLTVNAAATSSLSASDQAAATTMEAQINAVNKPQTVSNLDVSTQTGAYQAM 303
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID + +G+ +R + + + + ++ AD A E+ LS
Sbjct: 304 VSIDNALATVNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSADFAQETANLSRA 363
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ + L+ N+ ++L L +
Sbjct: 364 QVLQQAGISVLAQANSLPQQVLKLLQ 389
>gi|1311438|dbj|BAA11606.1| flagellin protein [Borrelia sp.]
gi|1311440|dbj|BAA11607.1| flagellin protein [Borrelia sp.]
Length = 329
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVKTAE 149
Score = 73.2 bits (177), Expect = 9e-11, Method: Composition-based stats.
Identities = 26/300 (8%), Positives = 75/300 (25%), Gaps = 1/300 (0%)
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ I D G I+ + + +++ + N + V
Sbjct: 31 SSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRM 90
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ + N DQA+ + +A T
Sbjct: 91 KELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSASQNVKTAEE 150
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ ++ + + V + VA + + ++
Sbjct: 151 LGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVANLFSGEGAQTAQAAP 210
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+ + + + ++ I+ I+ + +G+
Sbjct: 211 VQEGVQQEGAQQPAPATAPS-QGGVNSPVNVTTTVDANTSLAKIENAIRMVSDQRANLGA 269
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
+R+ ++ + + ++ ++ DA M E + Q A+ ++ N
Sbjct: 270 FQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSAMAMIAQANQVPQ 329
>gi|126175138|ref|YP_001051287.1| flagellin domain-containing protein [Shewanella baltica OS155]
gi|304409970|ref|ZP_07391589.1| flagellin domain protein [Shewanella baltica OS183]
gi|307302317|ref|ZP_07582075.1| flagellin domain protein [Shewanella baltica BA175]
gi|125998343|gb|ABN62418.1| flagellin domain protein [Shewanella baltica OS155]
gi|304351379|gb|EFM15778.1| flagellin domain protein [Shewanella baltica OS183]
gi|306914355|gb|EFN44776.1| flagellin domain protein [Shewanella baltica BA175]
Length = 275
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 71/181 (39%), Gaps = 3/181 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M A + L + L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSMKAQKNLNTSSSGLASSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S I++ M + +++ +++ +D +I+SEI L S++
Sbjct: 64 GMRNANDAISIAQISEGAMQEQTNMLQRMRDLTIQAENGANSTSDIDAIKSEIDALASEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA ++F L + I KV + + V +
Sbjct: 124 SAIANSTAFGNTKLLDGTFSAGKTFQVGHQNKEDITVSVSKVTASALKVQASVVKVSTAA 183
Query: 180 S 180
Sbjct: 184 Q 184
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 58/206 (28%)
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
I + + A T+ + ++ A + D +
Sbjct: 69 NDAISIAQISEGAMQEQTNMLQRMRDLTIQAENGANSTSDIDAIKSEIDALASEISAIAN 128
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
++ T ++ S + + A+ +
Sbjct: 129 STAFGNTKLLDGTFSAGKTFQVGHQNKEDITVSVSKVTASALKVQASVVKVSTAAQRSAS 188
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ ID IK +G+I +R+ + V R+VD D A E+ ++
Sbjct: 189 LTNIDAAIKAIDTQRSNLGAIQNRLAYNISNSANTQANVADAKSRIVDVDFAKETATMTK 248
Query: 425 LQTQQQLAVQALSIVNNSTARILSLF 450
Q QQ L+ N LSL
Sbjct: 249 NQVLQQTGSAMLAQANQLPQVALSLL 274
>gi|254457149|ref|ZP_05070577.1| flagellin FliC [Campylobacterales bacterium GD 1]
gi|207085941|gb|EDZ63225.1| flagellin FliC [Campylobacterales bacterium GD 1]
Length = 275
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 71/194 (36%), Gaps = 3/194 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN AM+A + N L+ + +SSGLR++ AAD++A +IA + + + L
Sbjct: 5 INTNIGAMNAHRNATMNNIGLDKSLNSLSSGLRINKAADDSAGLAIANKLSAQSQGLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
G + A + + +++ ++ D I E+T L ++
Sbjct: 65 VRNSNDGIGLIQTADGALEEYGNILKRVRVLAVQASNDTQDATSRGYIGQEVTALLAEAN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
DIA + FNG N L G++ + + T V ++
Sbjct: 125 DIATTTKFNGVNLLDGTGGTTGTFTFHTGAYTTEVQAVAIGSAQTAVLVTGGTAVNTRTA 184
Query: 181 TDGTERYGLLDRNH 194
+ T
Sbjct: 185 AEATISNMDTAIQA 198
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 39/97 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
N + A E +S +DT I+ +G+ +++ I + + + ++ D D
Sbjct: 179 VNTRTAAEATISNMDTAIQAVDGKRATLGAAQNKLESTVRNISVTQVNIAAAESQIRDVD 238
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES + Q A+S N +L L +
Sbjct: 239 FAAESANFAKHNILAQSGSYAMSQANAVQQNVLRLLQ 275
>gi|241765798|ref|ZP_04763739.1| flagellar hook-associated protein 3 [Acidovorax delafieldii 2AN]
gi|241364309|gb|EER59459.1| flagellar hook-associated protein 3 [Acidovorax delafieldii 2AN]
Length = 418
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/445 (11%), Positives = 125/445 (28%), Gaps = 47/445 (10%)
Query: 1 MTS-----ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKS 55
M+S + T + +A + L + +L +Q+ ++SG RV A+D+ + A+ +
Sbjct: 1 MSSNTIYRVGTANMYDNALRNLGERQTSLSSLQENLTSGKRVVRASDDPVSAAQAERALT 60
Query: 56 DNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEI 112
+ A+ + + A++ M +A+ ++ + I + D +I +++
Sbjct: 61 RLSRIQTEQRALETQRNAIAQAESAMGEAVGLVQNARELIVSAGNGTLTPNDRATIANQL 120
Query: 113 TQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
L+ QL ++A NG L + + D Q ++ +
Sbjct: 121 KGLREQLSEVANRKDTNGVPLLGALGSALAPFLGPLTTSPDYTFDGLAGQNSSTGVSIPN 180
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ +R G+ + + + L + + + + + G
Sbjct: 181 TLDGDSAFMFQPQRDGVYNASVSTIPNGRQLTTDGIKPTNTALVTGDQYTIAFSAVGPGA 240
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT 292
T T + V + I
Sbjct: 241 TTGTTTATYTITNTTTGAVSAPVTVPDFPSDKPVTIAVTGVPGLSFNI------------ 288
Query: 293 TKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANT 352
T + L ++ +
Sbjct: 289 ---------------------------TGTPATGDTVTLQPSASMFSTLDSAIRDIGGAA 321
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
+ A+ + ++ +D ++ G + +R +E R D
Sbjct: 322 NNNAATQAVGQALANVDIGLERMHNMRSYAGELLNRADRITGDQDKRSIQLEGDRSRAED 381
Query: 413 ADMASESTRLSALQTQQQLAVQALS 437
DM + Q + A+++ +
Sbjct: 382 LDMIKGISDFQNQQVGYEAALKSYA 406
>gi|483603|emb|CAA49321.1| p41 [Borrelia burgdorferi]
Length = 336
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q++ SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNAINAANLSKTQEKPSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVKTAE 149
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/208 (10%), Positives = 55/208 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
S + + +
Sbjct: 189 IYSANVANLFAGEGAQAAQAAPVQEGAQEEGAQQPTPATAPTQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+ ++ N +LSL R
Sbjct: 309 TKSILTQSAMAMIAQANQVPQYVLSLLR 336
>gi|939800|dbj|BAA09678.1| flagellin protein [Borrelia sp.]
Length = 329
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVRTAE 149
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 18/201 (8%), Positives = 53/201 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 189 IYAANVANLFSGEGAQAAQTAPVQDGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTA 444
Q A+ ++ N
Sbjct: 309 TNSILTQSAMAMIAQANQVPQ 329
>gi|323700472|ref|ZP_08112384.1| flagellin domain protein [Desulfovibrio sp. ND132]
gi|323460404|gb|EGB16269.1| flagellin domain protein [Desulfovibrio desulfuricans ND132]
Length = 286
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 3/147 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ N A +A++ L L +R+SSGLRV+ +AD+AA ++ ++M+SD L+
Sbjct: 3 LVVNNNLMASAAARNLNGAYSALSTSTERLSSGLRVNSSADDAAGLAVRELMRSDISTLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S ++ A +S + + +K I SE + S+
Sbjct: 63 QGIRNANDGISMIETADGALSVIDEKLIRMKELAEQAATGTYTDAQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASI 145
+ IA + FNG L +L + +I
Sbjct: 123 ITRIANATDFNGIYLLNGNLSADGVTI 149
Score = 94.0 bits (231), Expect = 5e-17, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 51/139 (36%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T ++ D + V L + + A + + ++ I+
Sbjct: 148 TIHFGTGNDAAEDKYDVTIANCTASALGVGLAAGVDKAGAVVSTQAAAQAALDALNDAIE 207
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ +R+ +++ + ++ R+ D D+A+E T + Q Q AV
Sbjct: 208 SKDNVRANLGAMQNRLTATISNLEIQAENLQASESRISDVDVATEMTEYTKEQIITQSAV 267
Query: 434 QALSIVNNSTARILSLFRG 452
LS N+ LSL G
Sbjct: 268 AMLSQANSLPQMALSLIGG 286
>gi|222144098|dbj|BAH19241.1| flagellin [uncultured Leptospira sp.]
gi|222144100|dbj|BAH19242.1| flagellin [uncultured Leptospira sp.]
gi|222144102|dbj|BAH19243.1| flagellin [uncultured Leptospira sp.]
gi|222144104|dbj|BAH19244.1| flagellin [uncultured Leptospira sp.]
gi|222144122|dbj|BAH19253.1| flagellin [uncultured Leptospira sp.]
gi|222144124|dbj|BAH19254.1| flagellin [Leptospira sp. NM-9]
gi|222144126|dbj|BAH19255.1| flagellin [Leptospira sp. TM-1]
gi|222144128|dbj|BAH19256.1| flagellin [Leptospira sp. TM-2]
gi|222144130|dbj|BAH19257.1| flagellin [Leptospira sp. TM-3]
gi|222144132|dbj|BAH19258.1| flagellin [Leptospira sp. TM-7]
gi|222144134|dbj|BAH19259.1| flagellin [Leptospira sp. TM-8]
gi|225878721|dbj|BAH30677.1| flagellin [uncultured Leptospira sp.]
gi|225878723|dbj|BAH30678.1| flagellin [uncultured Leptospira sp.]
gi|225878725|dbj|BAH30679.1| flagellin [uncultured Leptospira sp.]
gi|225878727|dbj|BAH30680.1| flagellin [uncultured Leptospira sp.]
gi|225878731|dbj|BAH30682.1| flagellin [uncultured Leptospira sp.]
gi|225878733|dbj|BAH30683.1| flagellin [uncultured Leptospira sp.]
gi|225878735|dbj|BAH30684.1| flagellin [uncultured Leptospira sp.]
gi|225878737|dbj|BAH30685.1| flagellin [uncultured Leptospira sp.]
gi|225878739|dbj|BAH30686.1| flagellin [uncultured Leptospira sp.]
gi|225878741|dbj|BAH30687.1| flagellin [uncultured Leptospira sp.]
gi|225878743|dbj|BAH30688.1| flagellin [uncultured Leptospira sp.]
gi|225878745|dbj|BAH30689.1| flagellin [uncultured Leptospira sp.]
gi|225878747|dbj|BAH30690.1| flagellin [uncultured Leptospira sp.]
gi|225878749|dbj|BAH30691.1| flagellin [uncultured Leptospira sp.]
gi|225878751|dbj|BAH30692.1| flagellin [uncultured Leptospira sp.]
gi|225878753|dbj|BAH30693.1| flagellin [uncultured Leptospira sp.]
gi|225878755|dbj|BAH30694.1| flagellin [uncultured Leptospira sp.]
gi|225878757|dbj|BAH30695.1| flagellin [uncultured Leptospira sp.]
gi|225878759|dbj|BAH30696.1| flagellin [uncultured Leptospira sp.]
gi|225878761|dbj|BAH30697.1| flagellin [uncultured Leptospira sp.]
gi|225878763|dbj|BAH30698.1| flagellin [uncultured Leptospira sp.]
gi|225878765|dbj|BAH30699.1| flagellin [uncultured Leptospira sp.]
gi|283806342|dbj|BAI66413.1| flagellin [uncultured Leptospira sp.]
gi|283806344|dbj|BAI66414.1| flagellin [uncultured Leptospira sp.]
gi|283806346|dbj|BAI66415.1| flagellin [uncultured Leptospira sp.]
gi|312839802|dbj|BAJ34938.1| flagellin [uncultured Leptospira sp.]
Length = 230
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 68/228 (29%), Gaps = 3/228 (1%)
Query: 31 VSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMST 90
+SSG+R++ AAD+A+ ++++ +++ L G S + A+ + + +++
Sbjct: 1 LSSGMRINSAADDASGLAVSEKLRTQVNGLRQAERNTEDGMSFIQTAEGFLEQTSNIIQR 60
Query: 91 IKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
I+ D + +Q E++ L ++ IA + FN + +
Sbjct: 61 IRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVDRIASQAEFNKFKLFEGQFARGSRVASM 120
Query: 148 SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
++ + I T+ + D +
Sbjct: 121 WFHMGPNQNQRERFYIGTMTSKALKLVKADGRPIAISSPGEANDVIGLADAALTKIMKQR 180
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + L + + D + +
Sbjct: 181 ADMGAYYNRLEYTAKGLMGAYENMQASESRIRDADMAEEVVSLTTKQI 228
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 27/74 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ D + +G+ +R+ + + ++ R+ DAD
Sbjct: 156 ISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRIRDAD 215
Query: 415 MASESTRLSALQTQ 428
MA E L+ Q
Sbjct: 216 MAEEVVSLTTKQIL 229
>gi|189026091|ref|YP_001933863.1| flagellar filament 34.5 kDa core protein [Treponema pallidum subsp.
pallidum SS14]
gi|189018666|gb|ACD71284.1| flagellar filament 34.5 kDa core protein [Treponema pallidum subsp.
pallidum SS14]
Length = 118
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 47/98 (47%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SAM A + L N + +++SSG R++ A D+A+ ++++ M+S L+
Sbjct: 3 INHNMSAMFAQRTLGHTNVQVGKGIEKLSSGYRINRAGDDASGLAVSEKMRSQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER 101
S G + + + +A + + D+M I+
Sbjct: 63 STNASNGVNFIQVTEAYLQETTDIMQRIRELAIQAAST 100
>gi|229121312|ref|ZP_04250543.1| Flagellin [Bacillus cereus 95/8201]
gi|228662157|gb|EEL17766.1| Flagellin [Bacillus cereus 95/8201]
Length = 370
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/250 (14%), Positives = 82/250 (32%), Gaps = 3/250 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R+++A+D+AA +IA M++ L +D G
Sbjct: 1 MRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAADNTQNG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + A A + +++ +++ + ++ E + L+ Q+ IA+ +
Sbjct: 61 MSLIRTADAALGSVSNILLRMRDIANQTATGTNTKENQNALNKEFSALKDQIDYIAKNTQ 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
FN + L + + D+ ++ I + +
Sbjct: 121 FNDKALLNGVGDTQKGDTVIKIQTLDSDDEGKQLSIKLGSATTTALGINALNIGGDVADK 180
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ ++ K + ++ DA + + W G
Sbjct: 181 PAPTDSTEVTNVQNATKTLTEAITDAGSDDAKILAAVNAFKDTWDANKTGYEGPTVGQLD 240
Query: 248 IPVPLPAAPA 257
+
Sbjct: 241 ALLGGFTTGG 250
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 22/181 (12%), Positives = 58/181 (32%)
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+V + + +D + + T ++
Sbjct: 190 TNVQNATKTLTEAITDAGSDDAKILAAVNAFKDTWDANKTGYEGPTVGQLDALLGGFTTG 249
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
+ D +K A + V+ ID+ ++ ++G+ +R+
Sbjct: 250 GDHAAITAKIGELTPKAAAPAADPVADKPAALQAVTAIDSALEMIANNRAELGATLNRLD 309
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ +K + ++ ++ DADMA E + ++ + + + LS N + + L
Sbjct: 310 FNVNNLKSQQSSMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLL 369
Query: 451 R 451
+
Sbjct: 370 Q 370
>gi|227820867|ref|YP_002824837.1| putative flagellin A [Sinorhizobium fredii NGR234]
gi|227339866|gb|ACP24084.1| putative flagellin A [Sinorhizobium fredii NGR234]
Length = 305
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 84/146 (57%), Positives = 101/146 (69%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AM+A Q LR I+ N+E Q RVSSGLRV +AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNTAAMAALQTLRAIDDNMETTQGRVSSGLRVGEAADNAAYWSIATTMRSDNMAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG++KVD + A M AI+V+ IK+KI A E G D IQ EI QLQ QL
Sbjct: 61 SAVQDALGLGAAKVDTSYAAMESAIEVVKEIKSKIVAATEEGVDKTKIQEEIDQLQEQLM 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA +SF+GENW+ D +
Sbjct: 121 SIAESASFSGENWVAGDAADKSVVSG 146
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ M E ++ ++ ++ T+AA ++GSIS RI LQEDF+ + D+++ G+GRLVDADM
Sbjct: 210 DTAEMAEALTLVEDGLQAMTSAASELGSISMRIGLQEDFVAALTDSIDSGIGRLVDADMN 269
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ESTRL ALQTQQQLAVQ+LSI N ++ IL LFR
Sbjct: 270 EESTRLKALQTQQQLAVQSLSIANTNSENILQLFR 304
>gi|217972606|ref|YP_002357357.1| flagellin domain-containing protein [Shewanella baltica OS223]
gi|217497741|gb|ACK45934.1| flagellin domain protein [Shewanella baltica OS223]
Length = 275
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 71/181 (39%), Gaps = 3/181 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN ++M A + L + L +R+SSGLR++ A D+AA +I+ + S L
Sbjct: 4 TVNTNVTSMKAQKNLNTSSSGLASSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S I++ M + +++ +++ +D +I+SEI L S++
Sbjct: 64 GMRNANDAISIAQISEGAMQEQTNMLQRMRDLTIQAENGANSTSDIDAIKSEIDALASEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA ++F L + I KV + + V +
Sbjct: 124 SAIANSTAFGNTKLLDGSFSAGKTFQVGHQNKEDITVSVSKVTASALKVQASVVKVSTAA 183
Query: 180 S 180
Sbjct: 184 Q 184
Score = 94.4 bits (232), Expect = 4e-17, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 58/206 (28%)
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
I + + A T+ + ++ A + D +
Sbjct: 69 NDAISIAQISEGAMQEQTNMLQRMRDLTIQAENGANSTSDIDAIKSEIDALASEISAIAN 128
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
++ T ++ S + + A+ +
Sbjct: 129 STAFGNTKLLDGSFSAGKTFQVGHQNKEDITVSVSKVTASALKVQASVVKVSTAAQRSAS 188
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ ID IK +G+I +R+ + V R+VD D A E+ ++
Sbjct: 189 LTNIDAAIKAIDTQRSNLGAIQNRLAYNISNSANTQANVADAKSRIVDVDFAKETATMTK 248
Query: 425 LQTQQQLAVQALSIVNNSTARILSLF 450
Q QQ L+ N LSL
Sbjct: 249 NQVLQQTGSAMLAQANQLPQVALSLL 274
>gi|87242512|gb|ABD33795.1| flagellin [Bacillus thuringiensis serovar huazhongensis]
Length = 330
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA MK+ G L+ + G S + A + +
Sbjct: 1 SKMSTAMDRLSSGKRINNASDDAAGLAIATRMKARQGGLNVAARNTQDGISLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ T+ ++Q E TQL+ Q+ IA + FN +N L
Sbjct: 61 NSVSNILLRMRDLANQSATGTNTDTNKVALQKEFTQLKEQINYIAANTQFNDKNLLDGSS 120
Query: 139 GSSTASI 145
Sbjct: 121 DQIKIQT 127
Score = 70.2 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 34/94 (36%)
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
I++ A V ID +K +G+ +R+ +K
Sbjct: 237 QTSFDTISKSATMPKAAADADALGAVKQIDVALKTIADNQATLGATLNRLEFNVTNLKSQ 296
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+++ ++ DADMA E + ++ + + +
Sbjct: 297 ENSMASSASQIEDADMAKEMSEMTKFKILNEAGI 330
>gi|332187901|ref|ZP_08389634.1| flagellin protein FlaA [Sphingomonas sp. S17]
gi|332012062|gb|EGI54134.1| flagellin protein FlaA [Sphingomonas sp. S17]
Length = 281
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 3/142 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I +N SA+ AS L V R+S+G R++ A D+AA +IA M S +
Sbjct: 1 MTVIASNISALRASSANGAATEALNVSMQRLSTGKRINSAKDDAAGLAIAASMTSQVRGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S A+ + + +++ ++ D +I +E L S
Sbjct: 61 NQAIRNSNDGISMAQTAEGALDEVSNMLQRMRELAVQKANGIYSTNDKANITAEQNALAS 120
Query: 118 QLRDIARGSSFNGENWLRTDLG 139
Q+ +I + FNG+ L G
Sbjct: 121 QVSNILFNTQFNGQKLLDGSAG 142
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 25/207 (12%), Positives = 57/207 (27%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
T L + K+ + ++ + + + N + +
Sbjct: 73 MAQTAEGALDEVSNMLQRMRELAVQKANGIYSTNDKANITAEQNALASQVSNILFNTQFN 132
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ V ++ S + + +A
Sbjct: 133 GQKLLDGSAGASGVVAIQAGANTSDAINMTFSNLTIDADITGAIDVVDPATGPSTIAAAA 192
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ D+ I +G+ +R+ + + + R+ D D ++E+T L+
Sbjct: 193 TLEKFDSAIGKVANIRAGLGATQNRLQSAVNNLTSNVTNLTDARSRIEDTDFSAETTALA 252
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLF 450
Q Q + LS N S +L L
Sbjct: 253 KAQILSQASTAMLSQANQSQQGVLKLL 279
>gi|119952949|ref|YP_945158.1| flagellin [Borrelia turicatae 91E135]
gi|62866014|gb|AAY17157.1| flagellin [Borrelia turicatae]
gi|62866016|gb|AAY17158.1| flagellin [Borrelia turicatae]
gi|62866018|gb|AAY17159.1| flagellin [Borrelia turicatae]
gi|62866020|gb|AAY17160.1| flagellin [Borrelia turicatae]
gi|62866022|gb|AAY17161.1| flagellin [Borrelia turicatae]
gi|62866024|gb|AAY17162.1| flagellin [Borrelia turicatae]
gi|62866026|gb|AAY17163.1| flagellin [Borrelia turicatae]
gi|119861720|gb|AAX17488.1| flagellin [Borrelia turicatae 91E135]
Length = 334
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNSINAANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSAAQNIKTAE 149
Score = 80.2 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 22/169 (13%), Positives = 50/169 (29%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G+ W + + N A V N + + +
Sbjct: 166 GSQASWTLRVHVGANQDEAIAVNIYAANVANLFAGEGAQVSPAQEGAQQEGVQAAPAPAA 225
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + +S I+ I+ + +G+ +R+ + + +
Sbjct: 226 APAQGGVNSPVNVTTTIDANMSLSKIENAIRMVSDQRANLGAFQNRLESIKASTEYAIEN 285
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ ++ DA M E + Q A+ ++ N +LSL R
Sbjct: 286 LKSSYAQIQDATMTDEIVASTTNSILTQSAMAMIAQANQVPQYVLSLLR 334
>gi|117923395|ref|YP_864012.1| flagellin domain-containing protein [Magnetococcus sp. MC-1]
gi|117607151|gb|ABK42606.1| flagellin domain protein [Magnetococcus sp. MC-1]
Length = 274
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 75/205 (36%), Gaps = 3/205 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I TN +A+ AS+ L ++ +L R+SSGLR++ AAD+AA S A M S +
Sbjct: 3 LTINTNMAALIASKNLNNVQGSLNKSFQRLSSGLRINSAADDAAGLSQASRMSSTIRGSN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G S +A+ +++ + I+ TD I E+ L ++
Sbjct: 63 QAIRNTNDGISIAQVAETALNETESALQRIRELTVQAANGTMTTTDRSDISKEVQALAAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
++ I+ + FNG L T S+ + + G T + Y
Sbjct: 123 IQRISTDTKFNGNTLLSTGGFSAYIKTNAEATAATVAVQVGSATSTALGIYQTLSFATAS 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVL 203
+T +
Sbjct: 183 KATSALTAIDNALSSVSSMRASLGA 207
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 44/96 (45%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ ID + ++ +G++ SR+ ++ + + R++DAD
Sbjct: 178 FATASKATSALTAIDNALSSVSSMRASLGAVQSRLESVVSGLQGIVENTTSARSRIMDAD 237
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+A+E+T L+ QQ V L+ N + +L+L
Sbjct: 238 VAAETTNLTRSAIIQQAGVAILAQANQQPSIVLALL 273
>gi|159184361|ref|NP_353571.2| hypothetical protein Atu0543 [Agrobacterium tumefaciens str. C58]
gi|1865674|emb|CAA65301.1| flaB [Agrobacterium tumefaciens str. C58]
gi|2459722|gb|AAB71798.1| FlaB [Agrobacterium tumefaciens]
gi|159139676|gb|AAK86356.2| flaB [Agrobacterium tumefaciens str. C58]
Length = 320
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 86/150 (57%), Positives = 102/150 (68%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI+TN +AMSA Q LR I N+E Q RVSSGLRV DA+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSIITNVAAMSALQTLRSIGQNMESTQARVSSGLRVGDASDNAAYWSIATTMRSDNMAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S+VSDA+GLG++KVD A AGMS AIDV+ IK K+ E G D +Q EI QLQ QL
Sbjct: 61 SSVSDALGLGAAKVDTASAGMSSAIDVVKEIKAKLVTATEEGVDRTKVQEEIGQLQKQLA 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVI 150
I++G+SF GENWL A+
Sbjct: 121 SISQGASFYGENWLVGVSTLGAATPGTDPD 150
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 61/136 (44%), Positives = 80/136 (58%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
VD T S + + ++ A + M E ++ ++ +K
Sbjct: 185 GSVDGTGTPDASGILGTVGTFTTVAAQSVYTLDITQYAAADRATNMAEALTLVENSLKAM 244
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
T+AA K+GS+S RI LQEDF + D+VEKG+GRLVDADM ESTRL ALQTQQQL VQA
Sbjct: 245 TSAAAKLGSLSMRIGLQEDFASKLSDSVEKGIGRLVDADMNEESTRLKALQTQQQLGVQA 304
Query: 436 LSIVNNSTARILSLFR 451
LSI N+++ ILSLFR
Sbjct: 305 LSIANSNSESILSLFR 320
>gi|4581627|gb|AAD24680.1|AF078155_1 flagellin [Burkholderia pseudomallei]
Length = 382
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 90/229 (39%), Gaps = 3/229 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 1 MLGINSNLNSLVAQQNLNGSQSALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A +G++ + + I+ +D+ ++Q E+ Q S
Sbjct: 61 NQGVSNANDGVSILQTASSGLTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVAQQIS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG+N L G+ + + +V + D + + I L L
Sbjct: 121 EVNRIASQTNYNGKNILDGSAGTLSFQVGANVGQTVTVDLSQSMSAAKIGGGLVQTGQTL 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + G E + + + T +T
Sbjct: 181 GTFKVAVDSSGAAWTASSTGQETTQINVLSDGKGGFTFTDQNNHTLSST 229
Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 50/136 (36%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+++ +T+ S D + +N + + + + + + ID +
Sbjct: 247 TVTLNSAATSSLSAADQAAAAAMQTQVNAVNQPQTVSNLNISTQTGAYQAMVSIDNALAT 306
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G+ +R + + + + ++ AD A E+ LS Q QQ +
Sbjct: 307 VNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSADFAQETANLSRAQVLQQAGIS 366
Query: 435 ALSIVNNSTARILSLF 450
L+ N+ ++L L
Sbjct: 367 VLAQANSLPQQVLKLL 382
>gi|269960151|ref|ZP_06174527.1| lateral flagellin LafA [Vibrio harveyi 1DA3]
gi|269835122|gb|EEZ89205.1| lateral flagellin LafA [Vibrio harveyi 1DA3]
Length = 282
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN++++ L + + L +R+S+G R++ AAD+AA I+ +++ +S
Sbjct: 3 LSMHTNYASLVTQNTLSNTSNLLNTAMERLSTGYRINSAADDAAGLQISNRLEAQTRGMS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G+S + A+ +A +++ + + T D ++Q E +L ++
Sbjct: 63 VAMRNAQDGTSMLQTAEGAFDEATNILYRMNDLATQSANGTNTAKDQDALQKEFAELGTE 122
Query: 119 LRDIARGSSFNGENWLRTDL 138
L++I + + G+ +
Sbjct: 123 LQNIMDNTKYAGDTLITGAG 142
Score = 91.0 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/222 (13%), Positives = 56/222 (25%)
Query: 230 AWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
+ NA + A + S + + A
Sbjct: 61 MSVAMRNAQDGTSMLQTAEGAFDEATNILYRMNDLATQSANGTNTAKDQDALQKEFAELG 120
Query: 290 RATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRH 349
+ ++ DL +D+ + +
Sbjct: 121 TELQNIMDNTKYAGDTLITGAGIKAGGLTLQIGSSSAETLDLATTVDTDVAAAHTALKTT 180
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
+ + T I AA +G+ +R+ + M + GR
Sbjct: 181 VPGLDIGSGGDASAAMDALVTAIDEVGAARSGLGATINRLDHTVVNLSNMVENTSAAKGR 240
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ DAD A ES+ ++ Q Q LS N +SL R
Sbjct: 241 ITDADFAVESSNMTKNQMLMQAGTTVLSQTNQLPGMAMSLLR 282
>gi|228952138|ref|ZP_04114233.1| Flagellin [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|228807670|gb|EEM54194.1| Flagellin [Bacillus thuringiensis serovar kurstaki str. T03a001]
Length = 266
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 58/169 (34%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G ++++A+DN A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNNASDNPANIAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVSNILQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T I Q
Sbjct: 123 YIGETTEFNDLSVFDGQNRPITLDDIGHTINMMKHIPPSPTQHDIKIST 171
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 27/239 (11%), Positives = 70/239 (29%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T + S
Sbjct: 27 MEHLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVSNI 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + T T + + + L
Sbjct: 87 LQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ M + + + + + + I+ ++ + +G++ +R+
Sbjct: 147 DIGHTINMMKHIPPSPTQHDIKISTEQEARAAILKIEDALQSVSLHRADLGAMINRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ ++ DADMA E + + ++A+ +S N + L +
Sbjct: 207 IENLNSQSMALTDAASQVEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSRLLQ 265
>gi|213967570|ref|ZP_03395718.1| flagellin [Pseudomonas syringae pv. tomato T1]
gi|302134821|ref|ZP_07260811.1| flagellin [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|213927871|gb|EEB61418.1| flagellin [Pseudomonas syringae pv. tomato T1]
gi|330875995|gb|EGH10144.1| flagellin [Pseudomonas syringae pv. morsprunorum str. M302280PT]
Length = 282
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 78/221 (35%), Gaps = 3/221 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA IA + S +
Sbjct: 3 LTVNTNVASLNVQKNLGRASDALSTSMTRLSSGLKINSAKDDAAGLQIATKITSQIRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ + ++ +++ ++ TD ++ E T + S+
Sbjct: 63 MAIKNANDGMSLAQTAEGALQESTNILQRMRELAVQSRNDSNSSTDRDALNKEFTAMSSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA+ ++ NG+N L + T + + S + +
Sbjct: 123 LTRIAQSTNLNGKNLLDGSASTMTFQVGSNSGSSNQITLTLSASFDANTLGVGSAVTIAG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
S + +E + + ST
Sbjct: 183 SDSTTSETNFSAAIAAIDSALQTINSTRADLGAAQNRLTST 223
Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 58/138 (42%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + S + + ++ + A +D+ + ++ ID+ ++
Sbjct: 145 MTFQVGSNSGSSNQITLTLSASFDANTLGVGSAVTIAGSDSTTSETNFSAAIAAIDSALQ 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R+ ++ + + +GR+ D D A+E+ +L+ QT QQ +
Sbjct: 205 TINSTRADLGAAQNRLTSTISNLQNINENASAALGRVQDTDFAAETAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 SVLAQANQLPSAVLKLLQ 282
>gi|228914338|ref|ZP_04077953.1| Flagellin [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228845332|gb|EEM90368.1| Flagellin [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 354
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 3/138 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R+++A+D+AA +IA M++ L ++ G
Sbjct: 1 MRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + A + M+ +++ +++ T+ ++Q E +LQ Q+ IA +
Sbjct: 61 MSLIRTADSAMNSVSNILLRMRDLANQSANGTNTDTNQAALQKEFGELQKQINYIATNTE 120
Query: 128 FNGENWLRTDLGSSTASI 145
FN + L D S
Sbjct: 121 FNDKKLLNGDNQSIAIQT 138
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 40/97 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
KL + +S ID + +G+ +R+ + +K ++ ++ DAD
Sbjct: 258 ATSKLNASQAISAIDAALTKVADNRATLGATLNRLDFNVNNLKSQSASMASAASQIEDAD 317
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + ++ + + + LS N + + L +
Sbjct: 318 MAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 354
>gi|229115199|ref|ZP_04244609.1| Flagellin [Bacillus cereus Rock1-3]
gi|228668339|gb|EEL23771.1| Flagellin [Bacillus cereus Rock1-3]
Length = 266
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 56/169 (33%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + + + +++G +++ A+DN A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNIAMEHLATGKKLNHASDNPANVAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDALSMLRTAEAALQTVTNILQRMRDLAVQSANDTNSNKNRDSLNKEFQSLTEQVG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN T + Q
Sbjct: 123 YIGATTEFNDLFVFDGQSRPITLDDIGHTVHMTNHIPPSPTQHDIKIST 171
Score = 92.9 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 70/243 (28%)
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ KK A+ + A + +A G+ A + T +
Sbjct: 23 MNIAMEHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDALSMLRTAEAALQT 82
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + +D + T T +
Sbjct: 83 VTNILQRMRDLAVQSANDTNSNKNRDSLNKEFQSLTEQVGYIGATTEFNDLFVFDGQSRP 142
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
L + + + + + + + + I+ ++ + +G++ +R
Sbjct: 143 ITLDDIGHTVHMTNHIPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGAMINR 202
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+H + + A+ R+ DADMA E + + ++A+ +S N +
Sbjct: 203 LHFNIENLNSQSMALTDASSRIEDADMAQEMSDFLKFKLLTKVALSMVSQANQIPQMVSK 262
Query: 449 LFR 451
L +
Sbjct: 263 LLQ 265
>gi|218886717|ref|YP_002436038.1| flagellin domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218757671|gb|ACL08570.1| flagellin domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 295
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/276 (17%), Positives = 90/276 (32%), Gaps = 3/276 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ N +A++ + L LE R+SSGLR++ AAD+AA +I ++M+SD AL+
Sbjct: 3 LVVNNNFTALTTANTLNATYNKLEKSTQRLSSGLRINSAADDAAGLAIRELMRSDITALN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A M + + +K I SE + S+
Sbjct: 63 QGVRNANDAISLIQTADGAMETIDEKLIRMKELAEQAATGTYNSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG L +L +ST + + G + DYY +
Sbjct: 123 ITRIANATDFNGIALLNGNLSNSTYDGSGLTSTGQLHIHFGSGNDSAQDYYEIRIGSVSA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
S + + Q D + + I + A +
Sbjct: 183 KSLGLGNTASGNGSSISTQQAAQDALDAIDNAIISKDQIRASLGAMQNRLEATITNLETQ 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ + + + T +++
Sbjct: 243 SENLSAAESRISDVDVSLEMTEYTKQQVLAQTAVAM 278
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 44/107 (41%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
T N + + + A ++ + ID I +G++ +R+ ++ + +
Sbjct: 189 NTASGNGSSISTQQAAQDALDAIDNAIISKDQIRASLGAMQNRLEATITNLETQSENLSA 248
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
R+ D D++ E T + Q Q AV LS N+ LSL G
Sbjct: 249 AESRISDVDVSLEMTEYTKQQVLAQTAVAMLSQANSLPQMALSLIGG 295
>gi|939806|dbj|BAA09689.1| flagellin protein [Borrelia garinii]
gi|939814|dbj|BAA09682.1| flagellin protein [Borrelia garinii]
Length = 329
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVKTAE 149
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 18/201 (8%), Positives = 53/201 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 189 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTA 444
Q A+ ++ N
Sbjct: 309 TNSILTQSAMAMIAQANQVPQ 329
>gi|306516611|gb|ADM96194.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 78/205 (38%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNAKANSDLNSKALDQSLARLSSGLRINSAADDASGMAIADSLRSQASTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + +S
Sbjct: 122 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKTTIGATQSSKIGLTRFETGGRISESG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 182 EVQFTLKNYNGIDDFKFQKVVISTS 206
>gi|225848916|ref|YP_002729080.1| flagellin [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644080|gb|ACN99130.1| flagellin [Sulfurihydrogenibium azorense Az-Fu1]
Length = 292
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 79/217 (36%), Gaps = 2/217 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N+S+ L L +R+S+G R++ AAD+AA + IA +++ +L
Sbjct: 5 INYNYSSDFTLVNLNRTESALNKSLERLSTGFRINRAADDAAGYFIADQLRTYALSLEQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD--SKSIQSEITQLQSQLRD 121
+ G S IA+ + + D+++ IK K D IQ +I +L +
Sbjct: 65 TRNANDGISISQIAQGALKEVYDILNDIKKKAIQAANSSDDTSRNQIQQDINKLVDAISK 124
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I + + FNG ++D ++ ++ V + + +S
Sbjct: 125 IFKDTEFNGLKLFKSDESATFTIHYGGRKDQYLEMTTATVGAQSEAVTGVGGSTFNKASL 184
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+ G + + +D + +
Sbjct: 185 VTIDTTGYCIDVTSVSAANATVSTVDALIKAVDDMAA 221
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 47/167 (28%)
Query: 285 SDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTL 344
K + + + + + T + S + +
Sbjct: 126 FKDTEFNGLKLFKSDESATFTIHYGGRKDQYLEMTTATVGAQSEAVTGVGGSTFNKASLV 185
Query: 345 NITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVE 404
I A VS +D IK A K GS + + R +
Sbjct: 186 TIDTTGYCIDVTSVSAANATVSTVDALIKAVDDMAAKFGSYQIELEKIISNNETSRVNTQ 245
Query: 405 KGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ R+ + DMA+E + LQ Q L+ N +L L R
Sbjct: 246 EAESRIRNVDMANEMANFTKLQILMQSGTAMLAQANAKNQLVLQLLR 292
>gi|34499333|ref|NP_903548.1| flagellin [Chromobacterium violaceum ATCC 12472]
gi|34105184|gb|AAQ61540.1| flagellin [Chromobacterium violaceum ATCC 12472]
Length = 282
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 81/219 (36%), Gaps = 3/219 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN S++ A L + +L R+SSGLR++ A D+AA +I+Q + S +
Sbjct: 4 TVNTNVSSLQAQLNLNNSQMSLTKSLQRLSSGLRINTAKDDAAGLAISQTLTSAIRGNNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
+ G S A+ + + + + I+ T+ +Q+E+ QL ++
Sbjct: 64 AVNNANDGISVGQTAEGALGQIANNLQRIREIAVQASNGSVSNTNRSQLQNEVDQLTQEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I + + FNG + L + + + + + + + + +
Sbjct: 124 SRIVQTTQFNGTSLLSGSAVLTFQVGSSGASSNQVSISSQDMTSAGVLCSYNSSLTATGT 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+ ++ + + Q+ + +
Sbjct: 184 ISVLSQGSASAILSALDQDISQISNVRSTWGAVQNRFDA 222
Score = 83.6 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 40/110 (36%)
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ T + + + ++S +D I + G++ +R ++
Sbjct: 173 SYNSSLTATGTISVLSQGSASAILSALDQDISQISNVRSTWGAVQNRFDAVVANLQNYVQ 232
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ R++D D ASE+ L+ Q QQ L N L+L +
Sbjct: 233 NLTAANSRILDVDFASETANLTKNQILQQAGASILKQANTLPQAALTLLQ 282
>gi|903610|gb|AAB03521.1| flagellin [Borrelia sp. strain Spain]
Length = 334
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNAINVANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFLQTPEGNLAEVEXVLVRMKEVAAQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNHMHMLSNRSAAENVRTAE 149
Score = 69.8 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 34/96 (35%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ T +G+ +R+ + + + ++ ++
Sbjct: 234 SPVNVTTAVDANMSLTKIEDAIRMVTDQRANLGAFPNRLESIKASTEYAIENLKASYAQI 293
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
DA M E + Q A+ ++ N +
Sbjct: 294 KDASMTDEIVASTTNSILTQSAMAMIAQANQVPRXV 329
>gi|1311432|dbj|BAA11603.1| flagellin protein [Borrelia sp.]
Length = 329
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSAAQNVKTAE 149
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/201 (9%), Positives = 54/201 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + A T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSAAQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T T + + + +
Sbjct: 189 IYAANVANLFSGEGAQTAQATPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTA 444
Q A+ ++ N
Sbjct: 309 TNSILTQSAMAMIAQANQVPQ 329
>gi|145597829|ref|YP_001161905.1| flagellin [Yersinia pestis Pestoides F]
gi|162420866|ref|YP_001604834.1| lateral flagellin [Yersinia pestis Angola]
gi|166212103|ref|ZP_02238138.1| lateral flagellin [Yersinia pestis biovar Antiqua str. B42003004]
gi|229837421|ref|ZP_04457584.1| Flagellin protein flaA [Yersinia pestis Pestoides A]
gi|145209525|gb|ABP38932.1| flagellin [Yersinia pestis Pestoides F]
gi|162353681|gb|ABX87629.1| lateral flagellin [Yersinia pestis Angola]
gi|166206849|gb|EDR51329.1| lateral flagellin [Yersinia pestis biovar Antiqua str. B42003004]
gi|229705544|gb|EEO91554.1| Flagellin protein flaA [Yersinia pestis Pestoides A]
Length = 398
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 59/451 (13%), Positives = 112/451 (24%), Gaps = 55/451 (12%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN SA +A L R+S+G R++ ADNAA I M
Sbjct: 3 LSIHTNGSAKTAINSLSKAGLANAKSSQRLSTGFRINSPADNAAGLQITNRM-------E 55
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
++ G + + A + + + + + + T +
Sbjct: 56 KFLNSAGQAKQNIQESIAMLQ----IADGGLAESVKTLNTMKKLATQAANDTNSAADREA 111
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I + + G+ + + G +R + T + L + +
Sbjct: 112 IQKEFTELGQELQNALNNTEYNAEKLFADGGKMRKELNFQSGTDANSSLKLDLNKVIEEL 171
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ L+ + +A+ +T + TF
Sbjct: 172 TESVTEERKKVTGTSASATGSLEKQAFDLNEATTKANTALKEAEILQEKITTNLTKTFPA 231
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ I A SGT +
Sbjct: 232 SVDIPGYINAKGVPVAHEIIPSGTPINTG------------------------------- 260
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
H + + K
Sbjct: 261 -------------HIGKIQTAVAALRATHDTAAKTEDEFQAEHSTGGGVMNLLLRNKDRA 307
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
E + I A +G+ +R+ + + M + +G + D D A E
Sbjct: 308 MEADKKLSDVIDAYGAFRATLGANQNRLQSSSNNLDNMISNTTQALGSIKDTDFADEMKN 367
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + Q +V L N +T I +L +G
Sbjct: 368 HAQSEMLMQSSVMMLKKANAATQLISTLLQG 398
>gi|939816|dbj|BAA09683.1| flagellin protein [Borrelia garinii]
gi|939818|dbj|BAA09684.1| flagellin protein [Borrelia garinii]
gi|1311416|dbj|BAA11595.1| flagellin protein [Borrelia garinii]
Length = 329
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVRTAE 149
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 18/201 (8%), Positives = 53/201 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 189 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTA 444
Q A+ ++ N
Sbjct: 309 TNSILTQSAMAMIAQANQVPQ 329
>gi|189339461|gb|ACD89088.1| flagellin [Bacillus thuringiensis serovar entomocidus]
Length = 278
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTAMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D+ S+ E L+ ++
Sbjct: 68 ARNTQDAMSALRTGDAALGSISNILLRMRDLATQAANGTNNAEDTASLDKEYVALKDEID 127
Query: 121 DIARGSSFNGENWLRTDLGSS 141
IA ++FNG ++L T
Sbjct: 128 HIAGKTNFNGNSFLDTTATPP 148
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 19/185 (10%), Positives = 52/185 (28%)
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + A+ ++ + D + ++
Sbjct: 94 RMRDLATQAANGTNNAEDTASLDKEYVALKDEIDHIAGKTNFNGNSFLDTTATPPGKDIE 153
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + ++ E ++ +DT I+ GS
Sbjct: 154 IQLSDASGDTMTLKAIDTKSLTTGTLTNLKDRATAETEITKLDTAIQKIADERATFGSQL 213
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R+ + + + ++ DADMA E + ++ + + + LS N + +
Sbjct: 214 NRLDHNLNNVTSQATNMAAAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMV 273
Query: 447 LSLFR 451
L +
Sbjct: 274 SKLLQ 278
>gi|939820|dbj|BAA09685.1| flagellin protein [Borrelia garinii]
gi|939822|dbj|BAA09686.1| flagellin protein [Borrelia garinii]
Length = 329
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVRTAE 149
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 18/201 (8%), Positives = 53/201 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 189 IYAANVANLFSGEGAQATQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTA 444
Q A+ ++ N
Sbjct: 309 TNSILTQSAMAMIAQANQVPQ 329
>gi|939804|dbj|BAA09688.1| flagellin protein [Borrelia garinii]
Length = 329
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVRTAE 149
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 18/201 (8%), Positives = 53/201 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 189 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPTPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTA 444
Q A+ ++ N
Sbjct: 309 TNSILTQSAMAMIAQANQVPQ 329
>gi|228914337|ref|ZP_04077952.1| Flagellin [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228845331|gb|EEM90367.1| Flagellin [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 266
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 58/169 (34%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A+DN A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNHASDNPANIAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + ++++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVMNILQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T + Q
Sbjct: 123 YIGETTGFNDLSVFDGQNRPVTLDDIGHTVNVTKHISPSPTQHDIKIST 171
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 27/239 (11%), Positives = 69/239 (28%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T +
Sbjct: 27 MEHLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVMNI 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + T T + + + L
Sbjct: 87 LQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTGFNDLSVFDGQNRPVTLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ ++ + + + + + I+ ++ + +GS+ +R+
Sbjct: 147 DIGHTVNVTKHISPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGSMINRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 207 IENLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSKLLQ 265
>gi|305389|gb|AAA25016.1| flagellin [Helicobacter pylori]
Length = 514
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 59/510 (11%), Positives = 144/510 (28%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A+++ N +L +++SSGLR++ AAD+++ +IA ++S + L
Sbjct: 5 INTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 64 --------------------------------SDAIGLGS---------SKVDIAKAGMS 82
A G S + +
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELD 124
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA---------RGSSFNGENW 133
+ S ++ +G + + T +++ + + SSF+GE
Sbjct: 125 NIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIGSTSSDKIGHVRMETSSFSGEGM 184
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL------------DPETVLLDSST 181
L + G++ + + +D + T+ + +S
Sbjct: 185 LASAAGANLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASY 244
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G ++ ++ +I + + + Q
Sbjct: 245 NVMATGGTPVQSGTVRELTINGVEIGTVNDVHKNDADGRLTNAINSVKDRTGVEASLDIQ 304
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A + + G + + + + +G + ++
Sbjct: 305 GRINLHSIDGRAISVHAASASGQVFGGGNFTGISGTQHAVIGRLTLTRTDARDIIVSGVN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G Y V+ + ++ + +
Sbjct: 365 FSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ D+ +GS+ + + I + + V+ ++ D D A ES
Sbjct: 425 MIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESAN 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|306516633|gb|ADM96205.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNAKANSDLNSKSLDQSLARLSSGLRINSAADDASGMAIADSLRSQASTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+IA ++FNG+ L + I S + + + L S
Sbjct: 122 NIANTTAFNGKQLLSGGFTNQEFQIGASSNQTVKATIGATQSSKIGVTRFETGSQSLSS 180
>gi|317133458|ref|YP_004092772.1| flagellin domain protein [Ethanoligenens harbinense YUAN-3]
gi|315471437|gb|ADU28041.1| flagellin domain protein [Ethanoligenens harbinense YUAN-3]
Length = 590
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/353 (11%), Positives = 100/353 (28%), Gaps = 3/353 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N +A++ L+ ++ ++S+G +++ AAD+A+ +I+Q M++ L+
Sbjct: 2 VINHNIAALNTLSNLQKNTSAVQDSLQKLSTGSKINKAADDASGLAISQKMQAQINGLNQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
+ + G+S + ++ + D++ ++ + ++Q + L ++
Sbjct: 62 AQENVSNGNSLIQTSEGALGNVQDILQKMRTLAVQAQNDTQNDTDKSNLQDQANALAQEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I+ +++N +N S + I V +
Sbjct: 122 NRISDQTTYNTKNVFGQTDSEGLFSNSGLQIQIGADSGQTINLTLGGTVVTTSTLVSASA 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+T T L + T S + +
Sbjct: 182 ATSATGSTTLSGDAADGYQYFVSTSSGTDTYAVTLNTASDGSIYATFKDSDGNQVMSTAV 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
A A S + + + + A + ++T
Sbjct: 242 TTAFTAAVSATTANGTTTYSIANSALFTAGNITATTINYDLTGVQGGTAGTAVSATAVTL 301
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANT 352
T + + T T + + S+ + +
Sbjct: 302 VGSQTTTGGTNIAATDTTDGTAGADPATATVTINGVAYTASLYSDSSATTVMQ 354
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 45/318 (14%), Positives = 76/318 (23%)
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
T + + V + + +TDGT
Sbjct: 272 NITATTINYDLTGVQGGTAGTAVSATAVTLVGSQTTTGGTNIAATDTTDGTAGADPATAT 331
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
I S ++ T + A +
Sbjct: 332 VTINGVAYTASLYSDSSATTVMQTASAGNVYFTLTDADGNVVKDSSGSKLVFTGTADASK 391
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
A G + S + A I ++ T N +
Sbjct: 392 KLSATGLNVGGKTASVTLGTATYTANIAGSGTNTTFTLTDVNGQVVKDTNGETATFTGSV 451
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T + T STT S+ L + A L ++ I T I
Sbjct: 452 TGGQLTTNSTTGKINVTESTSYLDAVSVSALGVGTGVGEAATALSLTGSNAINTIQTAID 511
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ K+G+ +R D + + + L D D+A E + Q A
Sbjct: 512 TVSKLRSKMGAYQNRFTYAGDTLDIESQNLTAAQSTLTDTDVAQEMMNYTKNNILVQSAQ 571
Query: 434 QALSIVNNSTARILSLFR 451
L+ N +LSL +
Sbjct: 572 AMLAQANQLPQGMLSLLK 589
>gi|306516559|gb|ADM96168.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 77/205 (37%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + +
Sbjct: 122 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRITSGG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 182 EVQFTLKNYNGIDDFKFQKVVISTS 206
>gi|87242428|gb|ABD33753.1| flagellin [Bacillus thuringiensis serovar navarrensis]
Length = 349
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 69/187 (36%), Gaps = 3/187 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + +
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARENGLGVAANNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + K++ E + L+ Q+ I++ + FN + L D
Sbjct: 61 NSVSNILLRMRDIANQSANGTNTSDNQKALDKEFSALKEQIDYISKNTEFNDKKLLNGDN 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
S + + + N T + T L +I
Sbjct: 121 KSIAIQTLDNADTTKQININLADSSTKSLNIDKLSIEGSGNKTITITTEQLAAAKTEIDA 180
Query: 199 EPQVLKD 205
Sbjct: 181 AKDAATT 187
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 33/93 (35%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T D + + ID + + +G+ +R+ + +K
Sbjct: 257 TTFAPATMIKAGDITKSSPNASDAIKSIDAALDTIASNRATLGATLNRLDFNVNNLKSQS 316
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
++ ++ DADMA E + ++ + + +
Sbjct: 317 SSMASAASQIEDADMAKEMSEMTKFKILNEAGI 349
>gi|228907393|ref|ZP_04071251.1| Flagellin [Bacillus thuringiensis IBL 200]
gi|228852254|gb|EEM97050.1| Flagellin [Bacillus thuringiensis IBL 200]
Length = 356
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 69/155 (44%), Gaps = 3/155 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R+++A+D+AA +IA M++ LS ++ G
Sbjct: 1 MRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLSVAANNTQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSS 127
+ + A + M+ +++ +++ + ++ E +QL+ Q+ IA +
Sbjct: 61 MALIRTADSAMNSVSNILLRMRDIANQSANETNTDANKIALNKEFSQLKEQITYIAENTQ 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
FN ++ L+ D ++ I + V
Sbjct: 121 FNDKDLLKGDNVIKIQTLDSDQASKQIDINLNAVT 155
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 37/89 (41%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
V ID + + +G+ +R+ + +K A+ ++ DADMA E + +
Sbjct: 268 TAVKQIDDALTMVASNRATLGATLNRLDFNVNNLKSQSSAMASAASQIEDADMAKEMSEM 327
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + + LS N + + L +
Sbjct: 328 TKFKILNEAGISMLSQANQTPQMVSKLLQ 356
>gi|251772407|gb|EES52974.1| flagellin domain protein [Leptospirillum ferrodiazotrophum]
Length = 283
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 3/138 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +++ A L + + +R+SSG RV+ AD+ A +SI Q+M + ++
Sbjct: 2 VINTNAASLGAQYNLNETQNRINQTINRLSSGYRVNTPADDPAGYSIGQVMTAYMKSVQQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
G++ + G+ +++ ++ + ++Q+E LQS++
Sbjct: 62 AVRNANDGANLIQTIGGGLLTDNEILIKMRALAIQAANGTYNDTDLSTLQNEYQNLQSEI 121
Query: 120 RDIARGSSFNGENWLRTD 137
IA+ ++FNG L
Sbjct: 122 NRIAKVANFNGRKVLDGS 139
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 31/100 (31%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ VS ID + G +G+ R+ + + ++
Sbjct: 183 GMTSIINSQMALSAVSAIDGALDELNRIQGTLGAFQQRMTWTIRNLNTALVNIAATKSQI 242
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
DA+ A E+ R + QQ L+ N + L
Sbjct: 243 KDANFAKETARFVRDRILQQSGTAVLAQANQIPQAAIKLI 282
>gi|303245795|ref|ZP_07332078.1| flagellin domain protein [Desulfovibrio fructosovorans JJ]
gi|302493058|gb|EFL52923.1| flagellin domain protein [Desulfovibrio fructosovorans JJ]
Length = 297
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 74/181 (40%), Gaps = 3/181 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI N A +A++ L + L R+SSGLR++ +AD+AA +I ++M++D A++
Sbjct: 3 LSINYNGMAANAARNLSNSYSALATSTQRLSSGLRINSSADDAAGLAIRELMRADVAAIN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K I SE + S+
Sbjct: 63 QGVRNANDAISMIQTADGALQVVDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG L +L +ST + + ++ G + DYY
Sbjct: 123 ITRIANATDFNGIYLLNGNLSASTHTGSGLNSSGKLKVHFGSGNQSAEDYYYVQIGTSTA 182
Query: 179 S 179
S
Sbjct: 183 S 183
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 51/135 (37%)
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
+ D + V L A+ + + + ++ + I T I
Sbjct: 163 GSGNQSAEDYYYVQIGTSTASALGVGLGAASGASGRSISTQELAQKALDAIQTAIVSKDK 222
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+GS+ +R+ +++ + ++ ++ D D+A+E T+ Q Q AV LS
Sbjct: 223 IRANLGSLQNRLENTISNLQIQGENLKAAESQISDVDVATEMTQFVRQQILTQSAVAMLS 282
Query: 438 IVNNSTARILSLFRG 452
N+ + L +G
Sbjct: 283 QANSLPRMAMQLIQG 297
>gi|71733403|ref|YP_275550.1| flagellin [Pseudomonas syringae pv. phaseolicola 1448A]
gi|257484930|ref|ZP_05638971.1| flagellin [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|289627775|ref|ZP_06460729.1| flagellin [Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|298487844|ref|ZP_07005884.1| Flagellin protein flaA [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|38175044|dbj|BAD01155.1| putative flagellin protein [Pseudomonas syringae pv. glycinea]
gi|49205103|dbj|BAD24670.1| flagellin [Pseudomonas syringae pv. tabaci]
gi|71553956|gb|AAZ33167.1| flagellin FliC [Pseudomonas syringae pv. phaseolicola 1448A]
gi|146335612|gb|ABQ23411.1| FliC [Pseudomonas syringae pv. averrhoi]
gi|298157569|gb|EFH98649.1| Flagellin protein flaA [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|320325105|gb|EFW81174.1| flagellin [Pseudomonas syringae pv. glycinea str. B076]
gi|320329364|gb|EFW85357.1| flagellin [Pseudomonas syringae pv. glycinea str. race 4]
gi|330866435|gb|EGH01144.1| flagellin [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330880553|gb|EGH14702.1| flagellin [Pseudomonas syringae pv. glycinea str. race 4]
gi|331011054|gb|EGH91110.1| flagellin [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 282
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 77/221 (34%), Gaps = 3/221 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA IA + S +
Sbjct: 3 LTVNTNVASLNVQKNLGRASDALSTSMTRLSSGLKINSAKDDAAGLQIATKITSQIRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ + ++ +++ ++ TD ++ E T + S+
Sbjct: 63 MAIKNANDGMSLAQTAEGALQESTNILQRMRELAVQSRNDSNSSTDRDALNKEFTAMSSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA+ ++ NG+N L + T + + S + +
Sbjct: 123 LTRIAQSTNLNGKNLLDGSASTMTFQVGSNSGASNQITLTLSASFDANTLGVGSAVTIAG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
S + E + + ST
Sbjct: 183 SDSTTAETNFSAAIAAIDSALQTINSTRADLGAAQNRLTST 223
Score = 71.7 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 57/138 (41%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + S + ++ + A +D+ + ++ ID+ ++
Sbjct: 145 MTFQVGSNSGASNQITLTLSASFDANTLGVGSAVTIAGSDSTTAETNFSAAIAAIDSALQ 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R+ ++ + + +GR+ D D A+E+ +L+ QT QQ +
Sbjct: 205 TINSTRADLGAAQNRLTSTISNLQNINENASAALGRVQDTDFAAETAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 SVLAQANQLPSAVLKLLQ 282
>gi|306516563|gb|ADM96170.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 79/206 (38%), Gaps = 3/206 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 1 SINTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQ 60
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 61 AISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEEL 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+IA +SFNG+ L + + I S + + + S
Sbjct: 121 DNIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISAS 180
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 181 GEVQFTLKNYNGIDDFKFQKVVISTS 206
>gi|317153900|ref|YP_004121948.1| flagellin domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316944151|gb|ADU63202.1| flagellin domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 294
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 89/274 (32%), Gaps = 3/274 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N AM+A++ L LE+ R+SSGLR++ AAD+AA ++ ++M++D +L
Sbjct: 5 INNNLMAMNAARNLGTSYGALELSTRRLSSGLRITQAADDAAGLAVRELMRADISSLQQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A + + + +K I SE + S++
Sbjct: 65 IRNANDAISLIQTADGALGVIDEKLIRMKELAMQASTGTYNSDQRLIIDSEYQAMASEIT 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG L +L + +V G + YY+ + +
Sbjct: 125 RIANSTDFNGIYLLNGNLSGTHDGSTLAVTGQLKVHFGTGNDCSEDYYYIQINSSTASAL 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + Q D+ + + I L + +
Sbjct: 185 GVGLGAGTGAGASISTQALAQQALDVLNTAIISKDKIRASLGALQNRLENTVTVLEIQSE 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ + A +++
Sbjct: 245 NVAAAESRISDVDVAKEMTQFVRNQIMTQASVSM 278
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 46/123 (37%)
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+ + ++ + + + ++ + ++T I +G++ +
Sbjct: 171 YYYIQINSSTASALGVGLGAGTGAGASISTQALAQQALDVLNTAIISKDKIRASLGALQN 230
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
R+ +++ + V R+ D D+A E T+ Q Q +V L+ N+ L
Sbjct: 231 RLENTVTVLEIQSENVAAAESRISDVDVAKEMTQFVRNQIMTQASVSMLAQANSLPRMAL 290
Query: 448 SLF 450
SL
Sbjct: 291 SLI 293
>gi|28869153|ref|NP_791772.1| flagellin [Pseudomonas syringae pv. tomato str. DC3000]
gi|28852393|gb|AAO55467.1| flagellin [Pseudomonas syringae pv. tomato str. DC3000]
gi|331017013|gb|EGH97069.1| flagellin [Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 282
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 73/183 (39%), Gaps = 3/183 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA IA + S +
Sbjct: 3 LTVNTNVASLNVQKNLGRASDALSTSMTRLSSGLKINSAKDDAAGLQIATKITSQIRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ + ++ +++ ++ TD +++ E T + S+
Sbjct: 63 MAIKNANDGMSLAQTAEGALQESTNILQRMRELAVQSRNDSNSATDREALNKEFTAMSSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA+ ++ NG+N L + T + + S + +
Sbjct: 123 LTRIAQSTNLNGKNLLDGSASTMTFQVGSNSGASNQISLTLSASFDANTLGVGSAISITG 182
Query: 179 SST 181
+ +
Sbjct: 183 ADS 185
Score = 76.7 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 56/138 (40%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + S + ++ + D+ + A V+ ID+ ++
Sbjct: 145 MTFQVGSNSGASNQISLTLSASFDANTLGVGSAISITGADSATSEAAFSAAVAAIDSALQ 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R+ ++ + + +GR+ D D A+E+ +L+ QT QQ +
Sbjct: 205 TINSTRADLGAAQNRLTSTISNLQNINENASAALGRVQDTDFAAETAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 SVLAQANQLPSAVLKLLQ 282
>gi|289651634|ref|ZP_06482977.1| flagellin [Pseudomonas syringae pv. aesculi str. 2250]
Length = 282
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 77/221 (34%), Gaps = 3/221 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA IA + S +
Sbjct: 3 LTVNTNVASLNVQKNLGRASDALSTSMTRLSSGLKINSAKDDAAGLLIATKITSQIRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ + ++ +++ ++ TD ++ E T + S+
Sbjct: 63 MAIKNANDGMSLAQTAEGALQESTNILQRMRELAVQSRNDSNSSTDRDALNKEFTAMSSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA+ ++ NG+N L + T + + S + +
Sbjct: 123 LTRIAQSTNLNGKNLLDGSASTMTFQVGSNSGASNQITLTLSASFDANTLGVGSAVTIAG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
S + E + + ST
Sbjct: 183 SDSTTAETNFSAAIAAIDSALQTINSTRADLGAAQNRLTST 223
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 57/138 (41%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + S + ++ + A +D+ + ++ ID+ ++
Sbjct: 145 MTFQVGSNSGASNQITLTLSASFDANTLGVGSAVTIAGSDSTTAETNFSAAIAAIDSALQ 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R+ ++ + + +GR+ D D A+E+ +L+ QT QQ +
Sbjct: 205 TINSTRADLGAAQNRLTSTISNLQNINENASAALGRVQDTDFAAETAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 SVLAQANQLPSAVLKLLQ 282
>gi|303247021|ref|ZP_07333297.1| flagellin domain protein [Desulfovibrio fructosovorans JJ]
gi|302491728|gb|EFL51611.1| flagellin domain protein [Desulfovibrio fructosovorans JJ]
Length = 297
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 3/181 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I N A +A++ L + L R+SSGLR++ AAD+AA +I ++M+SD A++
Sbjct: 3 LTINYNGMAANAARNLSNSYGALATSTQRLSSGLRINTAADDAAGLAIRELMRSDVAAIN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K I SE + S+
Sbjct: 63 QGVRNANDAISMIQTADGALQVVDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG L +L +ST S + ++ G + DYY
Sbjct: 123 ITRIANATDFNGIYLLNGNLSASTHSGSGINASGKLKVHFGSGNQSAEDYYYVQIGTSTA 182
Query: 179 S 179
S
Sbjct: 183 S 183
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 50/135 (37%)
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
+ D + V L A+ + + + ++ + I T I
Sbjct: 163 GSGNQSAEDYYYVQIGTSTASALGVGLGAASGASGRSISTQELAQKALDAIQTAIVSKDK 222
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G++ +R+ +++ + ++ ++ D D+A+E T+ Q Q AV LS
Sbjct: 223 IRANLGALQNRLENTISNLQIQGENLKAAESQISDVDVATEMTQFVRQQILTQSAVAMLS 282
Query: 438 IVNNSTARILSLFRG 452
N+ + L G
Sbjct: 283 QANSLPKMAMQLISG 297
>gi|239906015|ref|YP_002952754.1| flagellin [Desulfovibrio magneticus RS-1]
gi|239795879|dbj|BAH74868.1| flagellin [Desulfovibrio magneticus RS-1]
Length = 298
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 72/180 (40%), Gaps = 3/180 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N A +A++ L D L R+SSGLR++ AAD+AA +I ++M+SD L+
Sbjct: 4 VINHNLMANNAARNLSDSYGALATSTRRLSSGLRITTAADDAAGLAIRELMRSDISTLNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S + A + + + +K I SE + S++
Sbjct: 64 GVRNANDAISMIQTADGALQVIDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMASEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FNG L +L SS + + ++ G ++ DYY S
Sbjct: 124 TRIASATDFNGIYLLNGNLSSSVHNGSNLTPQGKLKVHFGTGNASSEDYYYIQIGTSTAS 183
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 58/170 (34%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
+ N +S +N T H+ S+ + S + +
Sbjct: 129 ATDFNGIYLLNGNLSSSVHNGSNLTPQGKLKVHFGTGNASSEDYYYIQIGTSTASAFGLG 188
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ A + + + ++ + I I +G++ +R+ +++ +
Sbjct: 189 LGAASTSAGGRSISTQDLAQQALDAITAAIVSKDKIRANLGALQNRLENTISNLQIQAEN 248
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
++ ++ D D+A+E T Q Q AV LS N+ + L G
Sbjct: 249 LQSAESQISDVDVATEMTEFVRNQILTQAAVAMLSQANSLPKMAMQLISG 298
>gi|253681732|ref|ZP_04862529.1| flagellin [Clostridium botulinum D str. 1873]
gi|253561444|gb|EES90896.1| flagellin [Clostridium botulinum D str. 1873]
Length = 277
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 58/132 (43%), Gaps = 2/132 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N ++++ ++ + + + +R+SSG +++ A DN +++ M+ L
Sbjct: 3 LNHNMASLTICREQEKVWNSQSMYMNRISSGFKINSAKDNPNGLVLSEKMRVQIRGLQIA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG--VERGTDSKSIQSEITQLQSQLRD 121
G S + A + + ++ I+ D ++++SEI Q+ + D
Sbjct: 63 QRNAQDGMSMLQSADGALEEVQSMIIRIRELSIQAGGATNENDRQTLKSEINQMIDGIDD 122
Query: 122 IARGSSFNGENW 133
+ S FNG++
Sbjct: 123 ALKHSDFNGKSI 134
Score = 83.3 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 36/96 (37%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ +E + +D+ + + GK G++ +R+ + + + D + ++ D D+A
Sbjct: 180 DGNTIENYLEVVDSAVDRISDIRGKYGALCNRLEGTYNEVYEIHDTIVGTESKIRDTDIA 239
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
L+ + L N L + G
Sbjct: 240 EAMMNLARDNILIEAGQAMLVQSNQFPQDALRVLEG 275
>gi|1580779|emb|CAA67105.1| flagellin [Pseudomonas aeruginosa]
Length = 700
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 27/272 (9%), Positives = 71/272 (26%)
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ +L+ + + LD + + V L
Sbjct: 429 DTSFVLNGNEIKLSKGDSLDAVAQKINSAGLGVGAAVDNGKLVLNSYGADITLTDGGDKA 488
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
K ++ +G + + + ++ D V
Sbjct: 489 DKWWAGSYRSDQGTTSATTTHAQGNVDLSNQGLAADGSININGTDISFKAGDKIDDVVSK 548
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
+ S + + T + + ++
Sbjct: 549 INEQSQATGVSAAKDAHGLLVLNSNSDFTLGVPTGAGATDATAALGLTAGTSIAQETSVA 608
Query: 352 TDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
++ + ID+ +K + ++G++ +R ++ + + R+
Sbjct: 609 ELDIKTAFDAQKSIQVIDSALKQIDSQRAELGAVQNRFDSTISNLQSISENATSARSRVQ 668
Query: 412 DADMASESTRLSALQTQQQLAVQALSIVNNST 443
D D A+E+ ++ QT QQ + L+ N
Sbjct: 669 DTDFAAETAEMTKQQTLQQASTAVLAQANQLP 700
Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 16/162 (9%), Positives = 41/162 (25%), Gaps = 4/162 (2%)
Query: 46 YWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERG 102
IA + S ++ G S A+ + ++ +++ ++
Sbjct: 1 GLQIANRLTSQITGVNTAVKNANDGISIAQTAEGALQESTNILQRMRELSLQAANGSNSD 60
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNG-ENWLRTDLGSSTASIAKSVIGSFIRDDNGKV 161
D S+ E + L +L I ++F+ L G+ + + + +
Sbjct: 61 EDRNSLNQEFSALSKELTRIGSTTTFDTGMKLLDGSAGTLSFQVGANANENISFSLGKMD 120
Query: 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
+ V +
Sbjct: 121 AASLKSTSDTASVVGGPQPNSVLTSTLTQSASVVSTALVGTG 162
>gi|3834673|gb|AAC71051.1| flagellin [Burkholderia mallei]
Length = 388
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 55/353 (15%), Positives = 118/353 (33%), Gaps = 3/353 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQGALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A +G++ + + I+ +D+ ++Q E+ Q S
Sbjct: 61 NQGVSNANDGVSILQTASSGLTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVAQQIS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG+N L G+ + + +V + D + I + L
Sbjct: 121 EVNRIASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVDLTQSMSAAKIGGGMVQTGQTL 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + G + E + + + T + +T A + A
Sbjct: 181 GTIKVAIDSSGAAWSSGSTGQETTQINVVSDGKGGFTFTDQNNQALSSTAVTAVFGSPTA 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
A + + L + + + + + + + +A S++ + T
Sbjct: 241 GTGTAASPSFQTLALSTSATSALSATDQANATAMVAQINAVNKPQTVSNLDISTQTGAYQ 300
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
T + + + + A
Sbjct: 301 AMVSIDNALATVNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSADFA 353
Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/386 (11%), Positives = 109/386 (28%), Gaps = 6/386 (1%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ ++ ++ +S+AI +S+ K + D + + T++Q+Q+ + +G
Sbjct: 9 NSLVAQQNLNGSQGALSQAITRLSSGK-----RINSAADDAAGLAIATRMQTQINGLNQG 63
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + SS + + + + +
Sbjct: 64 VSNANDGVSILQTASSGLTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVAQQISEVN 123
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
R + + + V G + + ++ T I
Sbjct: 124 RIASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVDLTQSMSAAKIGGGMVQTGQTLGTI 183
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
AA ++ +T T+ S N+ S T
Sbjct: 184 KVAIDSSGAAWSSGSTGQETTQINVVSDGKGGFTFTDQNNQALSSTAVTAVFGSPTAGTG 243
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + T + ++ L + + + + + +
Sbjct: 244 TAASPSFQTLALSTSATSALSATDQANATAMVAQINAVNKPQT-VSNLDISTQTGAYQAM 302
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID + +G+ +R + + + + ++ AD A E+ LS
Sbjct: 303 VSIDNALATVNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSADFAQETANLSRA 362
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ + L+ N+ ++L L +
Sbjct: 363 QVLQQAGISVLAQANSLPQQVLKLLQ 388
>gi|1311434|dbj|BAA11604.1| flagellin protein [Borrelia sp.]
Length = 329
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVKTAE 149
Score = 72.5 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 17/201 (8%), Positives = 53/201 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 189 IYAANVANLFSGEGAQAAQATPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTA 444
Q A+ ++ N
Sbjct: 309 TNSILTQSAMAMIAQANQVPQ 329
>gi|126444272|ref|YP_001061205.1| flagellin [Burkholderia pseudomallei 668]
gi|134280679|ref|ZP_01767389.1| flagellin [Burkholderia pseudomallei 305]
gi|167725890|ref|ZP_02409126.1| flagellin D [Burkholderia pseudomallei DM98]
gi|254182929|ref|ZP_04889522.1| lateral flagellar flagellin [Burkholderia pseudomallei 1655]
gi|254299724|ref|ZP_04967173.1| lateral flagellar flagellin [Burkholderia pseudomallei 406e]
gi|125657182|gb|ABN48670.1| flagellin D [Burkholderia pseudomallei]
gi|126223763|gb|ABN87268.1| flagellin protein [Burkholderia pseudomallei 668]
gi|134247701|gb|EBA47785.1| flagellin [Burkholderia pseudomallei 305]
gi|157809316|gb|EDO86486.1| lateral flagellar flagellin [Burkholderia pseudomallei 406e]
gi|184213463|gb|EDU10506.1| lateral flagellar flagellin [Burkholderia pseudomallei 1655]
Length = 296
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 75/208 (36%), Gaps = 3/208 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN ++M L +L R+ +G R++ A+D+AA IA +KS + +
Sbjct: 1 MLSLHTNIASMRIQGALGRTQQDLTTSMTRLGTGYRINSASDDAAGLQIATRLKSQHLGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQS 117
+ +S + A+ + +++ + T + D S+Q E L +
Sbjct: 61 GVAAQNTQNATSMLQTAEGAFKEVENILHRMNALATQAADSAWTQADRDSLQKEYDALGT 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L++I +S+ GE + + + + +G+V + L
Sbjct: 121 ELKNIVDNTSYGGEKLFAAGASGAPGGKLTEKLTFQVGNTSGEVMELDVSTALAAAVKAF 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ ++ +
Sbjct: 181 EGASQVFGGGASGASGNTDITSISGANA 208
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 31/240 (12%), Positives = 71/240 (29%)
Query: 212 DASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
++ + + AT+ + A + A A + +
Sbjct: 57 HLGMGVAAQNTQNATSMLQTAEGAFKEVENILHRMNALATQAADSAWTQADRDSLQKEYD 116
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
++ I S + + + G + E +
Sbjct: 117 ALGTELKNIVDNTSYGGEKLFAAGASGAPGGKLTEKLTFQVGNTSGEVMELDVSTALAAA 176
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
K + + + + ++ + T + + +IG+ +R+
Sbjct: 177 VKAFEGASQVFGGGASGASGNTDITSISGANALLDNLSTALSAVGSLRAEIGAGQNRLTH 236
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + MRD + GR+ D D ASE+ ++ L QQ L + + +LSL +
Sbjct: 237 IANNLTNMRDNTQDAEGRIRDVDYASETANMTKLNILQQAGGSMLKQASQMSQLVLSLLQ 296
>gi|40645050|dbj|BAD06419.1| flagellin [Pseudomonas syringae pv. tomato]
Length = 282
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 73/183 (39%), Gaps = 3/183 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA IA + S +
Sbjct: 3 LTVNTNVASLNVQKNLGRASDALSTSMTRLSSGLKINSAKDDAAGLQIATKITSQIRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ + ++ +++ ++ TD +++ E T + S+
Sbjct: 63 MAIKNANDGMSLAQTAEGALQESTNILQRMRELAVQSRNDSNSATDREALNKEFTAMSSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA+ ++ NG+N L + T + + S + +
Sbjct: 123 LTRIAQSTNLNGKNLLDGSASTMTFQVGSNSGASNQISLTLSASFDANTLGVGSAISITG 182
Query: 179 SST 181
+ +
Sbjct: 183 ADS 185
Score = 75.9 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 57/138 (41%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + S + ++ + D+ + A V+ ID+ ++
Sbjct: 145 MTFQVGSNSGASNQISLTLSASFDANTLGVGSAISITGADSATSEAAFSAAVAAIDSALQ 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R+ ++ + + +GR+ D D+A+E+ +L+ QT QQ +
Sbjct: 205 TINSTRADLGAAQNRLTSTISNLQNINENASAALGRVQDTDLAAETAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 SVLAQANQLPSAVLKLLQ 282
>gi|170754682|ref|YP_001782283.1| flagellin [Clostridium botulinum B1 str. Okra]
gi|169119894|gb|ACA43730.1| flagellin [Clostridium botulinum B1 str. Okra]
Length = 284
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 64/172 (37%), Gaps = 3/172 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N ++++A + + D+++SG +V + D+ + ++ K L
Sbjct: 3 LSHNLASLNAFRNYSKVLREQSTALDKITSGYKVRRSKDDPNVMAQSEKTKIQIRGLQVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
S G S + A+ G+ +++ IK + + +Q+EI +L + +
Sbjct: 63 SRNAQDGVSMLQTAEGGLESIGNMLMRIKELTIQAANGTNNLDDQEVVQNEINELIAGIE 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
A+G+ FNG L S + + + I + +
Sbjct: 123 TTAKGTEFNGVKLLSQGYKFSDQTNVMTKPVPIGANVGDLEDIPFYNLTTEG 174
Score = 77.5 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/251 (10%), Positives = 71/251 (28%)
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++ V + + K A+ D + T L +
Sbjct: 28 DKITSGYKVRRSKDDPNVMAQSEKTKIQIRGLQVASRNAQDGVSMLQTAEGGLESIGNML 87
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + N + A + + +++ +
Sbjct: 88 MRIKELTIQAANGTNNLDDQEVVQNEINELIAGIETTAKGTEFNGVKLLSQGYKFSDQTN 147
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + ++ D + +T + + E + ++ I+ +
Sbjct: 148 VMTKPVPIGANVGDLEDIPFYNLTTEGLDIKGKINVTDASKLGESLDAVNNAIETVLSVR 207
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+ GS+ +R + + + +E LVDAD+A E + Q ++ +
Sbjct: 208 SEYGSLENRFEECMNNVGEISLKMEGANSELVDADVAEEMMIYAKSDILYQSSLAIMRQT 267
Query: 440 NNSTARILSLF 450
NN +L +
Sbjct: 268 NNFPMDVLKIL 278
>gi|1706820|sp|P50612|FLAA_HELMU RecName: Full=Flagellin A
Length = 494
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 45/264 (17%), Positives = 98/264 (37%), Gaps = 5/264 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +A++ L+ +++SSGLR++ AAD+A+ +I+ ++S AL
Sbjct: 4 VNTNINALTT--SAGATQLGLKNSLEKLSSGLRINKAADDASGMTISDSLRSQASALGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
G + +A M + + ++ TIK K T + G K+IQS+I +L L
Sbjct: 62 ISNANDGIGIIQVADKAMDEQLKILDTIKVKATQAAQDGQSLESRKAIQSDIIRLIQGLD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I +S+NG++ L + I S ++ ++ +S
Sbjct: 122 NIGNTTSYNGQSLLSGQWTNKEFQIGTYSNQSIKVSVGSTTSDKIGQVRINTGAMITAAS 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ ++ + + + I+ K + A ++ +
Sbjct: 182 EATLTFKQINGGGTSPLEGVKISHSVGTGLGVLAEVINKNSDKTGIRAKASVETTSDKEI 241
Query: 241 QAKGIATIPVPLPAAPAAPNTTSG 264
+ + + + + G
Sbjct: 242 MSGNLKNLTINDVNIGNIVDIKKG 265
Score = 64.0 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 28/76 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ D+ K +GS+ ++ + I + + V+ R+ + D
Sbjct: 419 VTTLVGAMLVMDIADSARKTLDKIRSDLGSVQGQMVSTVNNISVTQVNVKAAESRMREVD 478
Query: 415 MASESTRLSALQTQQQ 430
A+ES + Q
Sbjct: 479 FAAESAEFNKYNILAQ 494
>gi|30019804|ref|NP_831435.1| flagellin [Bacillus cereus ATCC 14579]
gi|296502360|ref|YP_003664060.1| flagellin [Bacillus thuringiensis BMB171]
gi|29895349|gb|AAP08636.1| Flagellin [Bacillus cereus ATCC 14579]
gi|296323412|gb|ADH06340.1| flagellin [Bacillus thuringiensis BMB171]
Length = 273
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 3 INTNINSMRTQEYMRQNQDKMNTAMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D+ S+ E L+ ++
Sbjct: 63 ARNTQDAMSALRTGDAALGSISNILLRMRDLATQAANGTNNAEDTASLDKEYVALKDEID 122
Query: 121 DIARGSSFNGENWLRTDLGSS 141
IA ++FNG ++L T
Sbjct: 123 HIAGKTNFNGNSFLDTTATPP 143
Score = 96.3 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 19/185 (10%), Positives = 52/185 (28%)
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + A+ ++ + D + ++
Sbjct: 89 RMRDLATQAANGTNNAEDTASLDKEYVALKDEIDHIAGKTNFNGNSFLDTTATPPGKDIE 148
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + ++ E ++ +DT I+ GS
Sbjct: 149 IQLSDASGDTMTLKAIDTKSLTTGTLTNLKDRATAETEITKLDTAIQKIADERATFGSQL 208
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R+ + + + ++ DADMA E + ++ + + + LS N + +
Sbjct: 209 NRLDHNLNNVTSQATNMAAAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMV 268
Query: 447 LSLFR 451
L +
Sbjct: 269 SKLLQ 273
>gi|939802|dbj|BAA09687.1| flagellin protein [Borrelia garinii]
gi|939808|dbj|BAA09679.1| flagellin protein [Borrelia garinii]
Length = 329
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 123 RIADQAQYNQMHMLSNKSASQNVRTAE 149
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 17/201 (8%), Positives = 53/201 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 189 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMISDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTA 444
Q A+ ++ N
Sbjct: 309 TNSILTQSAMAMIAQANQVPQ 329
>gi|157101694|gb|ABV23560.1| flagellin C [Bacillus thuringiensis serovar kurstaki]
Length = 266
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 58/169 (34%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G ++++A+DN A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNNASDNPANIAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVSNILQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T I Q
Sbjct: 123 YIGETTEFNDLSVFDGQNRPITLDDIGHTINMMKHIPPSPTQHDIKIST 171
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/239 (11%), Positives = 69/239 (28%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T + S
Sbjct: 27 MEHLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVSNI 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + T T + + + L
Sbjct: 87 LQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ M + + + + + + I+ ++ + +G++ +R+
Sbjct: 147 DIGHTINMMKHIPPSPTQHDIKISTEQEARAAILKIEDALQSVSLHRADLGAMINRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ + DADMA E + + ++A+ +S N + L +
Sbjct: 207 IENLNSQSMALTDAASQAEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSRLLQ 265
>gi|115381328|gb|ABI96347.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Bovismorbificans]
Length = 220
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAK 147
+ A
Sbjct: 121 NTLTIQVGAN 130
>gi|220927560|ref|YP_002504469.1| flagellin domain protein [Clostridium cellulolyticum H10]
gi|219997888|gb|ACL74489.1| flagellin domain protein [Clostridium cellulolyticum H10]
Length = 273
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 34/100 (34%)
Query: 352 TDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ + I+ I +A G+ +R+ + + + + R+
Sbjct: 174 YKDWAATTDANGAIDDIEGLINDVSAMRSYFGANQNRLEYNINNLDTYSENLSASESRIR 233
Query: 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D DMA+E + Q A L+ N +L L R
Sbjct: 234 DVDMANEMMEFTKQNILSQAAQSMLAQANQQPQGVLQLLR 273
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 43/265 (16%), Positives = 90/265 (33%), Gaps = 4/265 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+ ++L + +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNIAAMNTYRQLTNNTTASSKSLEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI----QSEITQLQSQL 119
S G S + + ++ +++ +K D+ + EI +L Q+
Sbjct: 63 SRNSQDGISMIQTGEGALATVSNILVRVKELAVQAANGTYDAANDLARVTEEIEELGLQI 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
DI + FNG + L D G + ++ I ++ T L +
Sbjct: 123 TDIQTNTKFNGISLLNNDTGITLQVGQETSQTLLIDTAKTNLKDVTAAVVLYKDWAATTD 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + L + + + ++ + + + AN
Sbjct: 183 ANGAIDDIEGLINDVSAMRSYFGANQNRLEYNINNLDTYSENLSASESRIRDVDMANEMM 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSG 264
+ K A G
Sbjct: 243 EFTKQNILSQAAQSMLAQANQQPQG 267
>gi|206970846|ref|ZP_03231798.1| A-type flagellin [Bacillus cereus AH1134]
gi|206734482|gb|EDZ51652.1| A-type flagellin [Bacillus cereus AH1134]
Length = 266
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 59/169 (34%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + ++ V + +++G ++++A+DN A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKHMNVAMEHLATGKKLNNASDNPANIAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSANGTNSNKNRHSLNKEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T + Q
Sbjct: 123 YIGETTEFNDLSVFDGQNRRVTLDDIGHTVHISKSISPSPTQHDIKIST 171
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/265 (10%), Positives = 81/265 (30%), Gaps = 1/265 (0%)
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ N Q L + + + A ++T K + A
Sbjct: 1 MRIGTNVLSMNARQSLYENEKHMNVAMEHLATGKKLNNASDNPANIAIVTRMHARASGMR 60
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
+ + + T+ + ++ + + +++ ++S+ +
Sbjct: 61 VAIRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSANGTNSNKNRHSLNKEFQSLTEQ 120
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD-AYNEKLAMEEMVS 366
+ +G T + D +R+ +I + D + + +
Sbjct: 121 IGYIGETTEFNDLSVFDGQNRRVTLDDIGHTVHISKSISPSPTQHDIKISTEQEARTTIR 180
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
I+ ++ + +GS+ +R+ + + A+ + D DMA E + +
Sbjct: 181 KIEEALQSVSLHRADLGSMINRLQFNIENLNSQSMALTDAASLIEDTDMAQEMSDFLKFK 240
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
++A +S N + L +
Sbjct: 241 LLTEVATSMVSQANQIPQIVSKLLQ 265
>gi|218678948|ref|ZP_03526845.1| flagellin domain protein [Rhizobium etli CIAT 894]
Length = 296
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 82/146 (56%), Positives = 102/146 (69%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN+SAM+A Q LR IN NLE Q+ VS+G RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNNSAMAALQTLRSINSNLETTQNSVSTGYRVDTASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A M AIDV+ IK+K+ A E G D +Q EI+QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYTAMDSAIDVVDEIKSKLVAATEDGVDKSKVQEEISQLQEQLM 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA+ +SF+GENW+ G+ +
Sbjct: 121 SIAQSASFSGENWVAGADGTKNVVSS 146
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 67/90 (74%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ +S I++ + T+A ++GSIS+RI LQEDF+ + D+++ GVGRLVDADM
Sbjct: 207 TTGQIQSALSTIESALSAMTSAGAQLGSISTRIDLQEDFVGALSDSIDSGVGRLVDADME 266
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARI 446
ES++LSALQTQQQLA+Q+LSI N+S+ I
Sbjct: 267 EESSKLSALQTQQQLAIQSLSIANSSSQNI 296
>gi|330808206|ref|YP_004352668.1| flagellin protein [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327376314|gb|AEA67664.1| putative flagellin protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 282
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 77/221 (34%), Gaps = 3/221 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA IA M S +
Sbjct: 3 LTVNTNTTSLNVQKNLNRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRMTSQIRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ M + +++ ++ TD ++ E +Q+ +
Sbjct: 63 MAIKNANDGISMAQTAEGAMQEQTNILQRMRELAIQSRNDSNSATDRVALNKEFSQMSDE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA ++ NG+N L + T + + +D ++
Sbjct: 123 LTRIANSTNLNGKNLLDGTASTMTFQVGSNTGTDNQISLTLSASFDAASLGVDSAITIIG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
S + E + + + ST
Sbjct: 183 SDSATAETNFSAAMDAITSAIDTINSARADLGAAQNRFAST 223
Score = 75.5 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 54/138 (39%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + + T + S+ + +D+ + + I + I
Sbjct: 145 MTFQVGSNTGTDNQISLTLSASFDAASLGVDSAITIIGSDSATAETNFSAAMDAITSAID 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+A +G+ +R ++ + + +GR+ D D A+E+ +L+ QT QQ +
Sbjct: 205 TINSARADLGAAQNRFASTISNLQNINENASAALGRVQDTDFAAETAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 SVLAQANQLPSAVLKLLQ 282
>gi|229020843|ref|ZP_04177552.1| Flagellin [Bacillus cereus AH1273]
gi|229027642|ref|ZP_04183844.1| Flagellin [Bacillus cereus AH1272]
gi|228733657|gb|EEL84444.1| Flagellin [Bacillus cereus AH1272]
gi|228740468|gb|EEL90757.1| Flagellin [Bacillus cereus AH1273]
Length = 327
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 70/186 (37%), Gaps = 3/186 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + V +R+SSG R++ AAD+AA +IA M++ L S G
Sbjct: 1 MRTQEYMRQNQDKMNVSMNRLSSGKRINSAADDAAGLAIATRMRAKENGLGVASRNTQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + A + M+ +++ +++ + +++ E + L+ Q+ I+ +
Sbjct: 61 ISMIRTADSAMNSVSNILLRMRDLAVQSANGTNTNENRGALEKEFSALRDQIDYISTNTQ 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
FNG+ L D S + + T T + T
Sbjct: 121 FNGKTLLNGDNKSIKIHSYDDGQAKTDANTSANSGTTNPGTTNPGTTNPAINGTINITLA 180
Query: 188 GLLDRN 193
+ N
Sbjct: 181 NVTSAN 186
Score = 91.0 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 36/96 (37%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + ID I + +G+ +R+ + + + ++ DADM
Sbjct: 232 TAIKNANDAIKAIDGMIASIAGSRADLGATLNRLDFNVESLNNQASNMASSASQIEDADM 291
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A E + ++ + + + LS N + + L +
Sbjct: 292 AKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 327
>gi|116250491|ref|YP_766329.1| flagellin B [Rhizobium leguminosarum bv. viciae 3841]
gi|241203115|ref|YP_002974211.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|115255139|emb|CAK06213.1| flagellin [Rhizobium leguminosarum bv. viciae 3841]
gi|240857005|gb|ACS54672.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|262283893|gb|ACY40755.1| FlaB [Rhizobium leguminosarum bv. viciae]
Length = 302
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 79/146 (54%), Positives = 100/146 (68%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN++AM+A Q LR IN L+ Q VSSG RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNNAAMAALQTLRGINQGLQETQAHVSSGYRVGKASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A + M AIDV+ IK K+ A E G D +Q EI+QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYSAMDSAIDVVGDIKAKLVAATESGVDKAKVQEEISQLQQQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
+A+ +SF+GENW+ G+ +
Sbjct: 121 SVAQSASFSGENWVAGADGTKNVVAS 146
Score = 91.0 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 50/106 (47%), Positives = 76/106 (71%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ +A ++ ++ +++ +K T+A ++GSIS RI LQE+F+ + D+++ G
Sbjct: 197 SVYAMDITNFTLGEIQSALTNVESALKAMTSAGAQLGSISKRIELQENFVSALSDSIDSG 256
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
VGRLVDA+M ES++LSALQTQQQLAVQ+LSI N+S+ IL+LFRG
Sbjct: 257 VGRLVDANMEEESSKLSALQTQQQLAVQSLSIANSSSQTILTLFRG 302
>gi|254194728|ref|ZP_04901159.1| flagellin structural protein [Burkholderia pseudomallei S13]
gi|169651478|gb|EDS84171.1| flagellin structural protein [Burkholderia pseudomallei S13]
Length = 392
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 55/353 (15%), Positives = 119/353 (33%), Gaps = 3/353 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 5 MLGINSNINSLVAQQNLNGSQGALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGL 64
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A +G++ + + I+ +D+ ++Q E+ Q S
Sbjct: 65 NQGVSNANDGVSILQTASSGLTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVAQQIS 124
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG+N L G+ + + +V + D + I + L
Sbjct: 125 EVNRIASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVDLTQSMSAAKIGGGMVQTGQTL 184
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + G + E + + + T + +T A ++ A
Sbjct: 185 GTIKVAIDSSGAAWSSGSTGQETTQINVVSDGKGGFTFTDQNNQALSSTAVTAVFGSSTA 244
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
A + + L + + + + + + + +A S++ + T
Sbjct: 245 GTGTAASPSFQTLALSTSATSALSATDQANATAMVAQINAVNKPQTVSNLDISTQTGAYQ 304
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
T + + + + A
Sbjct: 305 AMVSIDNALATVNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSADFA 357
Score = 83.6 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/386 (11%), Positives = 109/386 (28%), Gaps = 6/386 (1%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ ++ ++ +S+AI +S+ K + D + + T++Q+Q+ + +G
Sbjct: 13 NSLVAQQNLNGSQGALSQAITRLSSGK-----RINSAADDAAGLAIATRMQTQINGLNQG 67
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + SS + + + + +
Sbjct: 68 VSNANDGVSILQTASSGLTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVAQQISEVN 127
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
R + + + V G + + ++ T I
Sbjct: 128 RIASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVDLTQSMSAAKIGGGMVQTGQTLGTI 187
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
AA ++ +T T+ S N+ S T
Sbjct: 188 KVAIDSSGAAWSSGSTGQETTQINVVSDGKGGFTFTDQNNQALSSTAVTAVFGSSTAGTG 247
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + T + ++ L + + + + + +
Sbjct: 248 TAASPSFQTLALSTSATSALSATDQANATAMVAQINAVNKPQT-VSNLDISTQTGAYQAM 306
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID + +G+ +R + + + + ++ AD A E+ LS
Sbjct: 307 VSIDNALATVNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSADFAQETANLSRA 366
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ + L+ N+ ++L L +
Sbjct: 367 QVLQQAGISVLAQANSLPQQVLKLLQ 392
>gi|330967102|gb|EGH67362.1| flagellin [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 282
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 77/221 (34%), Gaps = 3/221 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA I + S +
Sbjct: 3 LTVNTNVASLNVQKNLGRASDALSTSMTRLSSGLKINSAKDDAAGLQIVTKISSQIRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ + ++ +++ ++ TD ++ E T + S+
Sbjct: 63 MAIKNANDGMSLAQTAEGALQESTNILQRMRELAVQSRNDSNSSTDRDALNKEFTAMSSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA+ ++ NG+N L + T + + S + +
Sbjct: 123 LTRIAQSTNLNGKNLLDGSASTMTFQVGSNSGSSNQITLTLSASFDANTLGVGSAVTIAG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
S + +E + + ST
Sbjct: 183 SDSTTSETNFSAAIAAIDSALQTINSTRADLGAAQNRLTST 223
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 58/138 (42%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + S + + ++ + A +D+ + ++ ID+ ++
Sbjct: 145 MTFQVGSNSGSSNQITLTLSASFDANTLGVGSAVTIAGSDSTTSETNFSAAIAAIDSALQ 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R+ ++ + + +GR+ D D A+E+ +L+ QT QQ +
Sbjct: 205 TINSTRADLGAAQNRLTSTISNLQNINENASAALGRVQDTDFAAETAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 SVLAQANQLPSAVLKLLQ 282
>gi|307944911|ref|ZP_07660248.1| flagellin [Roseibium sp. TrichSKD4]
gi|307771835|gb|EFO31059.1| flagellin [Roseibium sp. TrichSKD4]
Length = 503
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 78/501 (15%), Positives = 160/501 (31%), Gaps = 52/501 (10%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++I + + L+ + VQ+++++GL+V+ A DN + A + S L
Sbjct: 3 SNITLSAAVRQNLLTLQSTADLMSGVQNKLATGLKVNSALDNTNSFFTASGLNSRARDLG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQL 119
+ D +G + A G+ D++ K K + + K+ + L Q+
Sbjct: 63 TLLDDMGQSLQTIKAADKGIQTVTDLVEAAKAKANQALQTQSQFERKNYAEQYNNLLEQI 122
Query: 120 RDIARGSSFNGENWLRTDLGSST------------------------------------- 142
D+A+ SS+ G+N L D + T
Sbjct: 123 EDVAKDSSYKGKNLLAGDGNNLTTIFNEDSTSKLTIEAVDYTDTTLEDGLNLNDLAQGEG 182
Query: 143 ----ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
I + + D +G+ + V+ D
Sbjct: 183 AATSFQIQGASETLTLTDSDGQALNSASKLSAFTGAVMGDVIRLRDATTAAPTVGGVSLT 242
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
D+ S +F + +A +T + A
Sbjct: 243 VTTATTVQDLITELESAPGVRAEFDQTSGQLKIFSNDSANLHNNGAGSTATSATLSGLTA 302
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
+GTS S + + + + + + + + + +
Sbjct: 303 SAANAGTSLLASNASFKVGDTLTLTDGNNFELGSLEIEEDTSINDLVDFMDDFNGVSANF 362
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY---------NEKLAMEEMVSFID 369
+ + + D + S S + ++ ++
Sbjct: 363 NASTGRVGLESDTDLTLASDNSNFNAENFTADADGVTISALSDSGFASDNDINRVLDRLN 422
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
T + + A + G+ S + +++D+ K M + +++G G+L AD E L ALQT+Q
Sbjct: 423 TALTNLRSQASEFGTNLSTVEIRQDYTKSMINTLQEGAGKLTLADTNEEGANLLALQTRQ 482
Query: 430 QLAVQALSIVNNSTARILSLF 450
QLA +LS + + +LSLF
Sbjct: 483 QLASTSLSFASQADQTVLSLF 503
>gi|218658805|ref|ZP_03514735.1| flagellin domain protein [Rhizobium etli IE4771]
Length = 193
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 79/146 (54%), Positives = 100/146 (68%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN++AM+A Q LR IN L+ Q VSSG RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNNAAMAALQTLRGINQGLQTTQAHVSSGYRVGQASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A + M AIDV+ IK K+ A E G D +Q EI+QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYSAMDSAIDVVGDIKAKLVAATENGVDKAKVQEEISQLQQQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
+A+ +SF+GENW+ G+ +
Sbjct: 121 SVAQSASFSGENWVAGADGTKNVVAS 146
>gi|114054817|gb|ABI50009.1| FlaA [Clostridium botulinum]
Length = 242
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 26 VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAI 85
+++SSGLR++ A D+AA +I++ M+ L+ S S + A+ +++
Sbjct: 6 KAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQASRNSQDAISLIQTAEGALNETH 65
Query: 86 DVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSST 142
++ ++ D +++Q E+ +LQS++ I+ + FN ++ + +
Sbjct: 66 SILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEINRISSQTQFNTKSLINGAVSEDA 125
Query: 143 ASIA 146
++
Sbjct: 126 KAMT 129
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 40/118 (33%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D ++ T + + I + + + + + ++ ID I +
Sbjct: 124 DAKAMTFQIGANSGQTIKLTIGSMDAKTLKVDKIKLDDTAANVTKQIATIDNAINSVSKE 183
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
K+G+ +R+ + + ++ R+ D DMA E + Q A L
Sbjct: 184 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNILTQAAQAML 241
>gi|121607554|ref|YP_995361.1| flagellar hook-associated protein 3 [Verminephrobacter eiseniae
EF01-2]
gi|121552194|gb|ABM56343.1| flagellar hook-associated protein 3 [Verminephrobacter eiseniae
EF01-2]
Length = 417
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 54/453 (11%), Positives = 126/453 (27%), Gaps = 47/453 (10%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T + T + SA + L L +Q+ ++SG RV A+D+ + A+ + +
Sbjct: 6 TRLGTANMYDSALRNLGTRQSQLANLQESLTSGKRVVRASDDPVSAAQAERALNRLARIQ 65
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQ 118
+ A+ + + + ++ + A+D++ + + + + D +I +++ L+ Q
Sbjct: 66 SDQRALAAQRNAIALGESALGDAVDLVQNFRALVVSAGDASLQPADRATIANQLQSLREQ 125
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L +A NG L + T R Q + +
Sbjct: 126 LLQVANRKDTNGVALLSALGSAQTPFAGPLGGAPDYRFAGQPGQSASAGARIAATLDGDA 185
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ R G+ + L V+ + +G ++
Sbjct: 186 AFMFDPRRDGVYTATVSPIPTGRQLTTSAVTPTAPRLVTGDDYRITFSAAGPGATPGTSS 245
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
++ + + I+ +D
Sbjct: 246 ASYTITNSSTGAVSAPVRLPDFRADEPLTVTVTGIPGLSLDIQGLPADGDSITLRP---- 301
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
++ + +
Sbjct: 302 -----------------------------------GTSLFGTLDSAIDGIRRAPNQNAAI 326
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
++ + ++ ID ++ G G + +R +E R D DM
Sbjct: 327 QSVGQALANIDLGLERVHDMRGYAGELLNRADRISGDQTQRSIQLESDRSRAEDLDMIQG 386
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q Q A+++ + V + LSLF+
Sbjct: 387 ISDFQNQQVGYQAALKSYAQV-----QRLSLFQ 414
>gi|315186993|gb|EFU20750.1| flagellar hook-associated protein 3 [Spirochaeta thermophila DSM
6578]
Length = 415
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/437 (10%), Positives = 104/437 (23%), Gaps = 40/437 (9%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN L+ L VQ+R+SS R+ D D+ + A S L
Sbjct: 1 MNRISTNMPNDDMVYHLQKRERALYRVQNRMSSQTRIQDLRDDPVGAAHAVRYDSFLTRL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQS 117
+ I ++ + + + ++++ I+ + ++ E+ +L
Sbjct: 61 KRYGENIEYVQDYYNVVEGHLKEGVEILQRIRELTVQAAHGTYTPEDLKAMGKEVDELLE 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
QL IA G + + LL
Sbjct: 121 QLVQIANARGPEGRFLFGGARTRGEPF-------------------RVVRGNVPGADDLL 161
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + + + L G
Sbjct: 162 ITGVEYIGDITEKQTEIAEGAFITTGFSGNFVFGAQQQQVYATVDALDYRVGEAGYF--- 218
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ T G + + D + +
Sbjct: 219 ---------------SIDGVRIDVTEGDTLYSIVQKINDSAAPVRARIDPVNHSLILETT 263
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ V + + G S+ + + ++
Sbjct: 264 VPHQLWMEDGEGTVLQDLGIIAPPDVQRPPGNIAASAVHGGGSLFDVVMRVRDAMMVGDQ 323
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ +D + G+IG+ +R+ + V + + VD D++
Sbjct: 324 DALGGRGLGMVDEALSALVGKMGEIGARGTRLTFAYAHNQEEIPDVTELYAKRVDLDVSE 383
Query: 418 ESTRLSALQTQQQLAVQ 434
L L+ + A+
Sbjct: 384 AIIELKRLEFTHKAALS 400
>gi|87242470|gb|ABD33774.1| flagellin [Bacillus mycoides]
Length = 283
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 40/235 (17%), Positives = 81/235 (34%), Gaps = 3/235 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ V +R+SSG R++ AAD+AA +IA M++ L S G S + A + M
Sbjct: 1 DKMNVSMNRLSSGKRINSAADDAAGLAIATRMRAKENGLGVASRNTQDGISMIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + +++ E + L+ Q+ I+ + FNG+ L D
Sbjct: 61 NSVSNILLRMRDLAVQSANGTNTNENRGALEKEFSALRDQIDYISTNTQFNGKTLLNGDN 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
G + V D + + +GT L +
Sbjct: 121 GFIKIHSYDDGQATAATGSAAPVVDPGTDPGTGTDPGTTKPAINGTIDIKLANVTSANLE 180
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
+ + +GT T+ A + A + + +
Sbjct: 181 GNEKKLNQISISATNAGTAGTEDDTTAINNANDAIKAIDGMIASIAGSRADLGAT 235
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 17/182 (9%), Positives = 49/182 (26%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + + + + A + T T+ K
Sbjct: 102 DYISTNTQFNGKTLLNGDNGFIKIHSYDDGQATAATGSAAPVVDPGTDPGTGTDPGTTKP 161
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ + + ++ + S+ N D + + ID
Sbjct: 162 AINGTIDIKLANVTSANLEGNEKKLNQISISATNAGTAGTEDDTTAINNANDAIKAIDGM 221
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I + +G+ +R+ + + + ++ DADM E + ++ + +
Sbjct: 222 IASIAGSRADLGATLNRLDFNVESLNNQASNMASSASQIEDADMVKEMSEMTKFKILNEA 281
Query: 432 AV 433
+
Sbjct: 282 GI 283
>gi|325107598|ref|YP_004268666.1| flagellin domain protein [Planctomyces brasiliensis DSM 5305]
gi|324967866|gb|ADY58644.1| flagellin domain protein [Planctomyces brasiliensis DSM 5305]
Length = 859
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/388 (12%), Positives = 117/388 (30%), Gaps = 5/388 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN S++ + + + N L R+S+GL+++ DN A ++ ++S +
Sbjct: 1 MTRINTNVSSLRSLRSVNSANDKLNTALTRLSTGLKINSGKDNPAGLIASETLRSQVSTI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS----KSIQSEITQLQ 116
++ + A A + + ++++ I+ + + G S ++ Q ++
Sbjct: 61 EQSIKNSSRANNVIATADAALGEVNNLLNQIRGLVQESLNSGALSQSEIEANQLQVDAAL 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
S + I+ ++F G+ + T + N V + ++
Sbjct: 121 SAINRISANTAFAGDKLIDGSKAFVTKTTDADAGKLSDFQINEAVFGNSSTISIEAAITQ 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+ G + I++ + ++ ++ +
Sbjct: 181 EAEKAELRYGNGNMSSAATIELSGSKGSQVIFLGAASTSADIKNAINASSDVTGVEASFE 240
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
+ G + A S + + +D + T + +
Sbjct: 241 PGLTFSLGATQGFTDISTGTVANTLDSTFGTTTAGITLTDVRATATAGTDASLGGTVRIA 300
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDT-ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
T ST+A + L + + LN AN
Sbjct: 301 YADAAATTTSTLAVSSVASTSTGVLITVELGNTGTTAATSTVSDIVALLNSGTSANAVEA 360
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIG 383
++ T + +AAA G
Sbjct: 361 QNYVSAAVSTGSTTTGLATVSAAAALTG 388
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 365 VSFIDTQIKCATAAAGKIGSIS-SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
VS ++ I + G++G++ + I + + + + + + +VD D A + L+
Sbjct: 772 VSIVEESINRVSTLRGRLGALQKNVIDTNINTLGVALENISEARSAIVDTDFAETTAELT 831
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLF 450
Q Q + LSI N + ++LSL
Sbjct: 832 KAQVLSQAGISVLSIANQNPQQVLSLL 858
>gi|229172406|ref|ZP_04299965.1| Flagellin [Bacillus cereus MM3]
gi|228610877|gb|EEK68140.1| Flagellin [Bacillus cereus MM3]
Length = 364
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 71/191 (37%), Gaps = 3/191 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R+++A+D+AA +IA M++ L ++ G
Sbjct: 1 MRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + A + ++ +++ +++ + K++ E + L+ Q+ I++ +
Sbjct: 61 MSLIRTADSALNSVSNILLRMRDIANQSANGTNTSDNQKALDKEFSALKEQIDYISKNTE 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
FN + L D + + + + N T
Sbjct: 121 FNDKKLLNGDNKTIAIQTLDNADTAKQININLADSSTKSLNIDTLSIAGTTDKKITITAK 180
Query: 188 GLLDRNHKIKV 198
L D +
Sbjct: 181 DLTDNKATLDA 191
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 46/134 (34%)
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
D + + + + + T A D + ID + +
Sbjct: 231 SDKAIEGITEKITKFDGTHTAAAAIGTAYTAPAEGDITKSAPNASNAIKSIDAALDTIAS 290
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G+ +R+ + +K ++ ++ DADMA E + ++ + + + LS
Sbjct: 291 NRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGISMLS 350
Query: 438 IVNNSTARILSLFR 451
N + + L +
Sbjct: 351 QANQTPQMVSKLLQ 364
>gi|86356321|ref|YP_468213.1| flagellin C protein [Rhizobium etli CFN 42]
gi|86280423|gb|ABC89486.1| flagellin C protein [Rhizobium etli CFN 42]
Length = 302
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 87/226 (38%), Positives = 117/226 (51%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN++AM+A Q LR IN L+ Q VSSG RV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNNAAMAALQTLRGINQGLQTTQSHVSSGYRVGKAADNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A + M AIDV+ IK K+ A E G D +Q EI+QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYSAMDSAIDVVGDIKAKLVAATENGVDKAKVQEEISQLQQQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ +SF+GENW+ G+ + GS + + + + +
Sbjct: 121 SIAQSASFSGENWVAGADGTKNVVASFVRDGSNAVSVVMTDYVLDDGSAGNVLFGMSNGA 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + V + + + + T K T
Sbjct: 181 VETSTGILGTSNGATGSVYAMDITNFTLGQIQTALTNVESALKSMT 226
Score = 93.3 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 51/106 (48%), Positives = 75/106 (70%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ +A ++ ++ +++ +K T+A +GSIS RI LQE+F+ + D+++ G
Sbjct: 197 SVYAMDITNFTLGQIQTALTNVESALKSMTSAGAALGSISKRIELQENFVSALSDSIDSG 256
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+GRLVDADM ES++LSALQTQQQLAVQ+LSI N+S+ ILSLFRG
Sbjct: 257 IGRLVDADMEEESSKLSALQTQQQLAVQSLSIANSSSQTILSLFRG 302
>gi|42780852|ref|NP_978099.1| flagellin [Bacillus cereus ATCC 10987]
gi|42736772|gb|AAS40707.1| flagellin [Bacillus cereus ATCC 10987]
Length = 266
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 58/169 (34%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A+DN A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNHASDNPANVAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + A+A + +V+ +++ + S+ +E L Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVTNVLQRMRDLAVQSANGTNLNKNRNSLNNEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T + Q
Sbjct: 123 YIDETTEFNDLSVFDGQNRPVTLDDIGHTVNVTKHIPPSPTQHDINIST 171
Score = 93.7 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 70/239 (29%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T + +
Sbjct: 27 MEHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNV 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + + T T + + + L
Sbjct: 87 LQRMRDLAVQSANGTNLNKNRNSLNNEFQSLTEQIGYIDETTEFNDLSVFDGQNRPVTLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + I+ ++ + +G++ +R+
Sbjct: 147 DIGHTVNVTKHIPPSPTQHDINISTEKEARAAIRKIEEALQNVSLHRADLGAMINRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 207 IENLNSQSTALTDAASRIEDADMAQEMSDFLKYKLLTEVALSIVSQANQIPQMVSKLLQ 265
>gi|308126080|ref|ZP_07663624.1| A-type flagellin [Vibrio parahaemolyticus AQ4037]
gi|308110203|gb|EFO47743.1| A-type flagellin [Vibrio parahaemolyticus AQ4037]
Length = 146
Score = 104 bits (258), Expect = 4e-20, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 41/107 (38%)
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
+T +E V+ ID +K + ++G+ +R + + + + V
Sbjct: 39 DKKNVTVDTIDVTSVGGAQESVAIIDAALKYVDSHRAELGAFQNRFNHAISNLDNINENV 98
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R+ D D A E+T ++ Q Q + L+ + LSL
Sbjct: 99 NASKSRIKDTDFAKETTAMTKSQILSQASSSILAQAKQAPNSALSLL 145
>gi|306516613|gb|ADM96195.1| FlaA [Campylobacter jejuni]
gi|306516621|gb|ADM96199.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 104 bits (258), Expect = 4e-20, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 78/205 (38%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + +
Sbjct: 122 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKASIGATQSSKIGLTRFETGSRISVGG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 182 EVQFTLKNYNGIDDFKFQKVVISTS 206
>gi|4581623|gb|AAD24678.1|AF078153_1 flagellin [Burkholderia pseudomallei]
Length = 382
Score = 104 bits (258), Expect = 4e-20, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 91/229 (39%), Gaps = 3/229 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 1 MLGINSNLNSLVAQQNLNGSQSALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A +G++ + + I+ +D+ ++Q E+ Q S
Sbjct: 61 NQGVSNANDGVSILQTASSGLTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVAQQIS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG+N L G+ + + +V + D + + I L L
Sbjct: 121 EVNRIASQTNYNGKNILDGSAGTLSFQVGANVGQTVTVDLSQSMSAAKIGGGLVQTGQTL 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + G E + + + T + +T
Sbjct: 181 GTFKVAVDSSGAAWTASSTGQETTQINVLSDGKGGFTFTDQNNQTLSST 229
Score = 80.6 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 50/136 (36%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+++ +T+ S D + +N + + + + + + ID +
Sbjct: 247 TVTLNSAATSSLSAADQAAAAAMQTQVNAVNQPQTVSNLNISTQTGAYQAMVSIDNALAT 306
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G+ +R + + + + ++ AD A E+ LS Q QQ +
Sbjct: 307 VNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSADFAQETANLSRAQVLQQAGIS 366
Query: 435 ALSIVNNSTARILSLF 450
L+ N+ ++L L
Sbjct: 367 VLAQANSLPQQVLKLL 382
>gi|229096245|ref|ZP_04227218.1| Flagellin [Bacillus cereus Rock3-29]
gi|228687205|gb|EEL41110.1| Flagellin [Bacillus cereus Rock3-29]
Length = 367
Score = 104 bits (258), Expect = 4e-20, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 84/249 (33%), Gaps = 3/249 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R+++A+D+AA +IA M++ L ++ G
Sbjct: 1 MRTQEYMRQNQTKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARENGLGVAANNTQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + A + ++ +++ +++ + K++ E + L+ Q+ I++ +
Sbjct: 61 MSLIRTADSALNSVSNILLRMRDIANQSANGTNTSDNQKALDKEFSALKEQIDYISKNTE 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
FN + L D S + + + N T+ + T
Sbjct: 121 FNDKKLLNGDNKSIAIQTLDNADTTKQININLADSSTSALKIDTLSIEGTGTKTIAITTA 180
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ + + ++ ++T T K +
Sbjct: 181 DIAKDTNIAALTAAKGTLAGLTGSPTEAALTTAVEGFKTAFEKVDKNLMSDTAIKGIETA 240
Query: 248 IPVPLPAAP 256
I A
Sbjct: 241 IKAYDEAGT 249
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 50/139 (35%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ + T + + + + + V T + E + ID +
Sbjct: 229 MSDTAIKGIETAIKAYDEAGTKTLALAQAVGAAYTAPTAGNITKAAPNASEAIKSIDAAL 288
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ + +G+ +R+ + +K ++ ++ DADMA E + ++ + +
Sbjct: 289 ETIASNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAG 348
Query: 433 VQALSIVNNSTARILSLFR 451
+ LS N + + L +
Sbjct: 349 ISMLSQANQTPQMVSKLLQ 367
>gi|87242436|gb|ABD33757.1| flagellin [Bacillus thuringiensis serovar palmanyolensis]
Length = 349
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ ++ + E L+ Q+ I++ + FN + L D
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTKENQDALDKEFGALKEQIDYISKNTEFNDKKLLNGDN 120
Query: 139 GSSTASI 145
S
Sbjct: 121 KSIAIQT 127
>gi|729516|sp|P80160|FLAB2_TREHY RecName: Full=Flagellar filament core protein flaB2; AltName:
Full=34 kDa core protein
gi|450670|emb|CAA45081.1| flagellin [Brachyspira hyodysenteriae]
Length = 285
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 65/169 (38%), Gaps = 3/169 (1%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ L+ N +L +SSG+R++ A D+A+ ++++ M++ L G S
Sbjct: 13 QRTLKFRNVDLSKDMAALSSGMRINRAGDDASGLAVSEKMRTQIRGLRQAERNNSSGISF 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ + + ++ D++ I+ D IQ E++QL ++ IA + FN
Sbjct: 73 IQTTEGYLQESQDILQRIRELAVQSANGIYTDADRMLIQVEVSQLVDEVNRIASHAQFNT 132
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
N L + A F N + + + L +
Sbjct: 133 LNMLTGRFSNPNEGGAPVASMWFHIGANMDERRRVYIGTMTAAALGLQT 181
Score = 89.8 bits (220), Expect = 9e-16, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 48/166 (28%)
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
++ A+ T + + G + + I + +
Sbjct: 120 EVNRIASHAQFNTLNMLTGRFSNPNEGGAPVASMWFHIGANMDERRRVYIGTMTAAALGL 179
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
T + + + +D + + + + +R+ L + + +
Sbjct: 180 QTAEGTGISISSIDKANSAIGIVDEALTKVSKQRSNLPAYQNRLELTAQGLMIAYENTAA 239
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D DMA S + + Q Q + L+ N L L +
Sbjct: 240 SESRIRDTDMAETSVKFAKDQILSQANLAMLAQANTMNQGALRLIQ 285
>gi|222147859|ref|YP_002548816.1| flagellin [Agrobacterium vitis S4]
gi|221734847|gb|ACM35810.1| flagellin [Agrobacterium vitis S4]
Length = 321
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 76/287 (26%), Positives = 125/287 (43%), Gaps = 1/287 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTS TN +A +A Q LR + + Q RV++G RV+ AAD+AAYWSIA M+SDN +L
Sbjct: 1 MTSKNTNVAAYTALQSLRHTVSSRDDSQARVTTGYRVATAADDAAYWSIATTMRSDNRSL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+ + + +D A++GMS + D+M +K ++ E GT I +E+ +++ Q R
Sbjct: 61 SAVQDALSMAAGVLDTAESGMSTSTDLMMDVKARLVLAREGGTSRDKINTELDEIRDQFR 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA SSF+ ENWL S + + + + DP T ++
Sbjct: 121 SIAESSSFSKENWLLRSSTSDKDNRNLVGSFVRDGEGRISINTIDYNVGGDPGTSEVNYL 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST-KKFKLATTSGAWLKAANATF 239
D + G + E K + + T + + +TT+
Sbjct: 181 IDDLDGEGGILTGSGFATELGTAKTWVMFNGSKASTTHDEIRLEDSTTNADIDDMIKVVD 240
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD 286
A+ + + L A S S++ + + +
Sbjct: 241 AMAERMNGVASTLGAMSNRVEMQYEFSKDLQGSISKGVGNMVDTDMN 287
Score = 76.3 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 47/313 (15%), Positives = 100/313 (31%)
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ + + S + D ++T ++ L +
Sbjct: 9 AAYTALQSLRHTVSSRDDSQARVTTGYRVATAADDAAYWSIATTMRSDNRSLSAVQDALS 68
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ VL + + ++ + K +L + + ++
Sbjct: 69 MAAGVLDTAESGMSTSTDLMMDVKARLVLAREGGTSRDKINTELDEIRDQFRSIAESSSF 128
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ S + T ++ DPG +
Sbjct: 129 SKENWLLRSSTSDKDNRNLVGSFVRDGEGRISINTIDYNVGGDPGTSEVNYLIDDLDGEG 188
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
+ + K + +++M+ +D +
Sbjct: 189 GILTGSGFATELGTAKTWVMFNGSKASTTHDEIRLEDSTTNADIDDMIKVVDAMAERMNG 248
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
A +G++S+R+ +Q +F K ++ ++ KGVG +VD DM ES+RL ALQ ++QL +++LS
Sbjct: 249 VASTLGAMSNRVEMQYEFSKDLQGSISKGVGNMVDTDMNLESSRLKALQAKEQLGIKSLS 308
Query: 438 IVNNSTARILSLF 450
IVN S + L
Sbjct: 309 IVNTSVQSLSQLL 321
>gi|229058409|ref|ZP_04196793.1| Flagellin [Bacillus cereus AH603]
gi|228719918|gb|EEL71508.1| Flagellin [Bacillus cereus AH603]
Length = 356
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 69/155 (44%), Gaps = 3/155 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R+++A+D+AA +IA M++ LS ++ G
Sbjct: 1 MRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLSVAANNTQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSS 127
+ + A + M+ +++ +++ + ++ E +QL+ Q+ IA +
Sbjct: 61 MALIRTADSAMNSVSNILLRMRDIANQSANETNTDANKIALNKEFSQLKEQITYIAENTQ 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
FN ++ L+ D ++ I + V
Sbjct: 121 FNDKDLLKGDNVIKIQTLDSDKASKQIDINLNAVT 155
Score = 90.2 bits (221), Expect = 7e-16, Method: Composition-based stats.
Identities = 29/274 (10%), Positives = 65/274 (23%)
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
D + + E LK+ + + + K ++
Sbjct: 83 DIANQSANETNTDANKIALNKEFSQLKEQITYIAENTQFNDKDLLKGDNVIKIQTLDSDK 142
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
Q N S K + +A +
Sbjct: 143 ASKQIDINLNAVTLNKLGLNDVNIGSDKLEQKDLDIVTAAMLRVKTPNANATVRDKDVQD 202
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ V+ + K+ +
Sbjct: 203 AKEAFDKVKGFITDKTQVTEVENAFAAYATADTAGKDAAATLIDTKFAAAATLPAAGAAT 262
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
V ID + + +G+ +R+ + +K A+ ++ DADMA
Sbjct: 263 SADALTAVKQIDDALTMVASNRATLGATLNRLDFNVNNLKSQSSAMASAASQIEDADMAK 322
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E + ++ + + + LS N + + L +
Sbjct: 323 EMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 356
>gi|156306216|ref|XP_001617566.1| hypothetical protein NEMVEDRAFT_v1g225978 [Nematostella vectensis]
gi|156194587|gb|EDO25466.1| predicted protein [Nematostella vectensis]
Length = 299
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 35/95 (36%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ ++ +S +D ++ + +G+I +R ++ + +
Sbjct: 141 SNFVKDLNVTTAEGAQKALSIVDKALESVNSVRADLGAIQNRFTSVVANLQTSSENLSAS 200
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
R+ D D A E+ L+ Q QQ L+ N
Sbjct: 201 RSRIRDTDFAKETAELTRTQILQQAGTAMLAQANQ 235
Score = 77.9 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 30/73 (41%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
T A + + L +L R+SSG R++ A D+AA +I++ +
Sbjct: 227 TAMLAQANQRNLSTSGSSLATTIQRLSSGSRINSAKDDAAGLAISERFGTQIRGTDVAIR 286
Query: 66 AIGLGSSKVDIAK 78
G S +A+
Sbjct: 287 NANDGISLAQVAE 299
>gi|229102358|ref|ZP_04233066.1| Flagellin [Bacillus cereus Rock3-28]
gi|228681005|gb|EEL35174.1| Flagellin [Bacillus cereus Rock3-28]
Length = 226
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 57/169 (33%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G ++++A+DN A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLTTGKKLNNASDNPANVAIVTRMHARASCMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L Q+
Sbjct: 63 IRNNENALSMLRTAEAALQTVTNILQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIS 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN T + Q
Sbjct: 123 YIGETTEFNNLPVFGDQNRPVTLDDIGHTVNLTKHIPPSPTQHDIKIST 171
Score = 49.7 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 16/199 (8%), Positives = 50/199 (25%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A + A + T + +
Sbjct: 27 MEHLTTGKKLNNASDNPANVAIVTRMHARASCMRVAIRNNENALSMLRTAEAALQTVTNI 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + T T + + L
Sbjct: 87 LQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQISYIGETTEFNNLPVFGDQNRPVTLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + I+ ++ + +G++ +R+H
Sbjct: 147 DIGHTVNLTKHIPPSPTQHDIKISTEQEARTAIRKIEEALQNVSLHRADLGAMINRLHFN 206
Query: 393 EDFIKLMRDAVEKGVGRLV 411
+ + A+ R+
Sbjct: 207 IENLNSQSMALTDASSRIE 225
>gi|306516561|gb|ADM96169.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 78/205 (38%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 122 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGGRISSSG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 182 EVQFTLKNYNGIDDFKFQKVVISTS 206
>gi|258404760|ref|YP_003197502.1| flagellin domain-containing protein [Desulfohalobium retbaense DSM
5692]
gi|257796987|gb|ACV67924.1| flagellin domain protein [Desulfohalobium retbaense DSM 5692]
Length = 281
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 68/161 (42%), Gaps = 3/161 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN +++ + L + LE Q R+++GLR++ AAD+AA +I M S ++
Sbjct: 3 LSINTNMASLQSQMSLANSTQALEQNQQRLATGLRINSAADDAAGLTITDGMTSQIRGMN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ G + +++ ++ D K++Q E +L S+
Sbjct: 63 QAVRNANDGISMAQTAEGGAKEITNMLQRMRELAVQAANDTNTNADKKALQQEFDELASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
+ + + FN +N L GSS A +
Sbjct: 123 ISRVGEATQFNTKNLLTGTEGSSVAIQVGPNNTGNDTINID 163
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 39/85 (45%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ ++ +S IDT I ++G+ +R+ ++ + + R++DAD+
Sbjct: 186 STLSDIQAAISGIDTAIGTVDEFRSELGATQNRLQSSISNLENAAQNLTESRSRIMDADI 245
Query: 416 ASESTRLSALQTQQQLAVQALSIVN 440
A ES ++ +QQ + L+ N
Sbjct: 246 AKESAEMTQNNVRQQASAAVLAQAN 270
>gi|256830197|ref|YP_003158925.1| flagellin domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256579373|gb|ACU90509.1| flagellin domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 308
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 75/205 (36%), Gaps = 3/205 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N AM++++ L NL R+SSGLRV AAD+AA +I ++M++D +L+
Sbjct: 3 LVINHNLMAMNSARNLSTSYSNLATSTRRLSSGLRVGTAADDAAGLAIRELMRADIASLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K T I SE + S+
Sbjct: 63 QGVRNANDAISMIQTADGALQVIDEKLIRMKELATQAATGTYGSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG L +L SS + A+ + + + + +
Sbjct: 123 ITRIANATDFNGIYLLNGNLSSSNQNAAEWRLDHSGAGLQARGALKIHFGTGNDSSEDYY 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVL 203
G L ++
Sbjct: 183 YIAIGNSTASALGVGNQSDRSISSA 207
Score = 99.0 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 22/208 (10%), Positives = 56/208 (26%)
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
T + + ++ + + + G
Sbjct: 101 TGTYGSDQRLIIDSEYQAMASEITRIANATDFNGIYLLNGNLSSSNQNAAEWRLDHSGAG 160
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
+ + S + + + + + + + ++
Sbjct: 161 LQARGALKIHFGTGNDSSEDYYYIAIGNSTASALGVGNQSDRSISSAGFSISTQQGAQQA 220
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ I+ I +GS+ +R+ + + + ++ R+ D D+A E T
Sbjct: 221 LDAINNAIISKDKIRASLGSLQNRLENTITNLTIQAENLQAAESRISDVDVAQEMTEFVR 280
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFRG 452
Q Q AV L+ N + L +G
Sbjct: 281 NQILTQSAVAMLAQANQLPQMAMQLMQG 308
>gi|306516601|gb|ADM96189.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 78/205 (38%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 122 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 182 EVQFTLKNYNGIDDFKFQKVVISTS 206
>gi|94987152|ref|YP_595085.1| flagellin-like protein [Lawsonia intracellularis PHE/MN1-00]
gi|94731401|emb|CAJ54764.1| Flagellin and related hook-associated proteins [Lawsonia
intracellularis PHE/MN1-00]
Length = 293
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 64/204 (31%), Gaps = 3/204 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N A++A + L L ++SSGLRV AAD++A +I ++M+SD
Sbjct: 3 LVINNNLMAVNAQRNLSKSYGELSSSVRKLSSGLRVGTAADDSAGLAIRELMRSDIATTQ 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K T I SE + S+
Sbjct: 63 QGIRNANDAISMIQTADGALGVIDEKLIRMKELAEQAATGTYNSTQRMIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG L L + + G+ Y +
Sbjct: 123 ITRIANATEFNGIKLLDGSLSGNHDGKKINSTGAVRIHFGTSNSSAEDYYDIKIGGSTAS 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQV 202
+ G G
Sbjct: 183 ALGLGNTVKGAGATVSTQAAAQNA 206
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 38/105 (36%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
T + + A + + ID I +G + +R+ D + + + ++
Sbjct: 188 NTVKGAGATVSTQAAAQNALKAIDNAIVSKDKIRAHLGGLQNRLEATVDNLSIQNENLQA 247
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R+ D D++ E T+ Q Q V LS N+ L
Sbjct: 248 AESRISDIDVSQEMTQFVRNQILTQTGVAMLSQANSLPRMAQQLI 292
>gi|308061407|gb|ADO03295.1| flagellin B [Helicobacter pylori Cuz20]
Length = 514
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 58/510 (11%), Positives = 142/510 (27%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A+++ N +L +++SSGLR++ AAD+++ +IA ++S + L
Sbjct: 5 INTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 64 --------------------------------SDAIGLGS---------SKVDIAKAGMS 82
A G S + +
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELD 124
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA---------RGSSFNGENW 133
+ S ++ +G + + T +++ + + SSF+GE
Sbjct: 125 NIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTIKASIGSTSSDKIGHVRMETSSFSGEGM 184
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL------------DPETVLLDSST 181
L + + + + +D + T+ + +S
Sbjct: 185 LASAAAQNLTEVGLNFKQVNGVNDYKIESVRISTSAGTGIGALSEIINRFSNTLGVRASY 244
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G ++ ++ +I + + + Q
Sbjct: 245 NVMATGGTPVQSGTVRDLTINGVEIGTVNDVHKNDADGRLTNAINSVKDRTGVEASLDIQ 304
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A + + G + + + + +G + ++
Sbjct: 305 GRINLHSIDGRAISVHATSASGQVFGGGNFAGISGTQHAVIGRLTLTRTDARDIIVSGVN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G Y V+ + ++ + +
Sbjct: 365 FSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ D+ +GS+ + + I + + V+ ++ D D A ES
Sbjct: 425 MIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESAN 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|260768763|ref|ZP_05877697.1| flagellin protein flaA [Vibrio furnissii CIP 102972]
gi|260616793|gb|EEX41978.1| flagellin protein flaA [Vibrio furnissii CIP 102972]
Length = 309
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 3/152 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN++ + L +N L +R+S+GLR++ AAD+AA IA +++ + +S
Sbjct: 4 SLHTNYANLVTQNNLNSVNKALTTSMERLSTGLRINSAADDAAGLQIANRLEAQSRGMSV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S + A+ M + ++ +K+ T D ++QSE + L QL
Sbjct: 64 GMRNSQDAISMMQTAEGSMDEMTNMAYRMKDLATQAANGTNSDEDLAAMQSEFSALAGQL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
+ +SF G+ L D + IG
Sbjct: 124 HKMQTSTSFGGKQLLGADGAFGNENGITFQIG 155
Score = 77.5 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/235 (12%), Positives = 64/235 (27%)
Query: 216 TISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAA 275
+ T + + + + + A G + ++ +
Sbjct: 74 MMQTAEGSMDEMTNMAYRMKDLATQAANGTNSDEDLAAMQSEFSALAGQLHKMQTSTSFG 133
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
+ + T + V+ N ++ +
Sbjct: 134 GKQLLGADGAFGNENGITFQIGAGSGDVLDVNVSASMNKLEKAVGAFVGINVPDIGGGDE 193
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
D T + + + + +D+ I AA G+ + + +
Sbjct: 194 DGEGEGEGSTRTSGTSPAPMSIATDAKGAMEALDSFIGDLGAARSAFGAQINNLEHNINN 253
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ M + V+ GR++D D A ES +S Q Q Q LS +S+
Sbjct: 254 LANMVENVDASKGRIMDTDFAKESGVMSKNQMLMQAGAQMLSATKMMPQLAMSML 308
>gi|229178167|ref|ZP_04305538.1| Flagellin [Bacillus cereus 172560W]
gi|228605297|gb|EEK62747.1| Flagellin [Bacillus cereus 172560W]
Length = 269
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 59/169 (34%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + ++ V + +++G ++++A+DN A +I M + +
Sbjct: 6 IGTNVLSMNARQSLYENEKHMNVAMEHLATGKKLNNASDNPANIAIVTRMHARASGMRVA 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L Q+
Sbjct: 66 IRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSANGTNSNKNRHSLNKEFQSLTEQIG 125
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T + Q
Sbjct: 126 YIGETTEFNDLSVFDGQNRRVTLDDIGHTVHISKSISPSPTQHDIKIST 174
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/266 (10%), Positives = 81/266 (30%), Gaps = 1/266 (0%)
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+ N Q L + + + A ++T K + A
Sbjct: 3 IMRIGTNVLSMNARQSLYENEKHMNVAMEHLATGKKLNNASDNPANIAIVTRMHARASGM 62
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
+ + + T+ + ++ + + +++ ++S+ +
Sbjct: 63 RVAIRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSANGTNSNKNRHSLNKEFQSLTE 122
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD-AYNEKLAMEEMV 365
+ +G T + D +R+ +I + D + + +
Sbjct: 123 QIGYIGETTEFNDLSVFDGQNRRVTLDDIGHTVHISKSISPSPTQHDIKISTEQEARTTI 182
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
I+ ++ + +GS+ +R+ + + A+ + D DMA E +
Sbjct: 183 RKIEEALQSVSLHRADLGSMINRLQFNIENLNSQSMALTDAASLIEDTDMAQEMSDFLKF 242
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
+ ++A +S N + L +
Sbjct: 243 KLLTEVATSMVSQANQIPQIVSKLLQ 268
>gi|115381298|gb|ABI96332.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Kottbus]
gi|115381300|gb|ABI96333.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Kottbus]
Length = 220
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAK 147
+ A
Sbjct: 121 NTLTIQVGAN 130
>gi|87242412|gb|ABD33745.1| flagellin [Bacillus thuringiensis serovar toguchini]
Length = 325
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ G L+ S+ G S + A + +
Sbjct: 1 AKMSNSMDRLSSGKRINNASDDAAGLAIATRMRAREGGLNVASNNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ +++ + ++ E L+ Q+ IA+ + FN + L D
Sbjct: 61 GSVSNILLRMRDLANQSATGTNTKENQAALNKEFDALKEQIDYIAKNTQFNDTDLLNAD 119
Score = 69.0 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 52/189 (27%)
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
I + L A A S + + + + + +
Sbjct: 137 QKQITITLNGATRAALGIDTLSIANGETPIPPKGVAQATEALATFKKDFAAATGDTAKTA 196
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
K D S+T + + + A A
Sbjct: 197 AFNEFKKSWNEAKTDYTSSTALDAAIGSFDPTADAATAFDAGFAAATAKAATNTPNALLA 256
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
V ID ++ +G+ +R+ + +K ++ ++ DADMA E + ++
Sbjct: 257 VKEIDAALETIANNRADLGATLNRLDFNVNNLKSQSASMASAASQIEDADMAKEMSEMTK 316
Query: 425 LQTQQQLAV 433
+ + +
Sbjct: 317 FKILNEAGI 325
>gi|306516595|gb|ADM96186.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 77/205 (37%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + +
Sbjct: 122 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRITSGG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 182 EVQFTLKNYNGIDDFQFQKVVISTS 206
>gi|228926795|ref|ZP_04089863.1| Flagellin [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
gi|228832908|gb|EEM78477.1| Flagellin [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
Length = 266
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 57/169 (33%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A+DN A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNHASDNPANVAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDALSMLRTAEATLQTVANILQRMRDLAVQSSNDTNSNKNRDSLNKEFQSLTEQIS 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T + Q
Sbjct: 123 YIGETTEFNDLSVFDGQNRPVTLDDIGHTVNVTKHISPSPTQHDIKIST 171
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/239 (11%), Positives = 72/239 (30%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T T + +
Sbjct: 27 MEHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDALSMLRTAEATLQTVANI 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ ++D + T T + + + L
Sbjct: 87 LQRMRDLAVQSSNDTNSNKNRDSLNKEFQSLTEQISYIGETTEFNDLSVFDGQNRPVTLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ ++ + + + + + I+ ++ +G++ +R+
Sbjct: 147 DIGHTVNVTKHISPSPTQHDIKISTEQEARAAIRKIEEALQNVLLHRADLGAMINRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 207 IENLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLSEVALSMVSQANQIPQMVSELLQ 265
>gi|5668678|dbj|BAA82631.1| flagellin protein [Borrelia valaisiana]
Length = 329
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNRSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSAAQNVKTAE 149
Score = 73.2 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 17/201 (8%), Positives = 53/201 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + A T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSAAQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + + +
Sbjct: 189 IYAANVANLFSGEGAQSAQAAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMVSDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTA 444
Q A+ ++ N
Sbjct: 309 TNSILTQSAMAMMAQANQVPQ 329
>gi|1311418|dbj|BAA11596.1| flagellin protein [Borrelia tanukii]
gi|1311420|dbj|BAA11597.1| flagellin protein [Borrelia tanukii]
Length = 329
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNAINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSAAQNVKTAE 149
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 18/201 (8%), Positives = 53/201 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + A T+ G + + A+ S N +
Sbjct: 129 QYNQMHMLSNKSAAQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 188
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 189 IYAANVANLFSGEGAQTAQAAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 248
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E +
Sbjct: 249 SLAKIENAIRMVSDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAAT 308
Query: 424 ALQTQQQLAVQALSIVNNSTA 444
Q A+ ++ N
Sbjct: 309 TNSILTQSAMAMIAQANQVPQ 329
>gi|261341483|ref|ZP_05969341.1| flagellin FliC [Enterobacter cancerogenus ATCC 35316]
gi|288316279|gb|EFC55217.1| flagellin FliC [Enterobacter cancerogenus ATCC 35316]
Length = 286
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN S+M++ L N L +R+ +G R++ AAD+AA IA ++ ++
Sbjct: 3 LSIFTNASSMASVNALNKSNSMLSTAMERLGTGKRINSAADDAAGLQIATRLQGQTNGMA 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQ 118
I ++ + A+ + ++M +K+ T D K++QSE+ +L ++
Sbjct: 63 VAQRNISDATALLQTAEGAFDEVSNIMYRMKDLATQAANDTNGPEDRKALQSEMDELNNE 122
Query: 119 LRDIARGSSFNGENWLRTDL 138
L +I + + GE+
Sbjct: 123 LTNIMDNTKYAGESLFAASG 142
Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/210 (15%), Positives = 67/210 (31%)
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
Q A V T + + P + ++ +
Sbjct: 76 QTAEGAFDEVSNIMYRMKDLATQAANDTNGPEDRKALQSEMDELNNELTNIMDNTKYAGE 135
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ S +E L+ G S + T + A
Sbjct: 136 SLFAASGKFTAAMNFQIGASEGEKLEVNVSADLTKVKGASGLQGLQTASGASGALLSVSG 195
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ M++ ++ I K+G+ +R+ + M+D + +G + DAD ASE++
Sbjct: 196 AQGMITKVENAISQVGTLRSKLGANINRLGHTAANLANMKDNTDLALGNIRDADFASEAS 255
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q Q ++ L N+ + ++SL
Sbjct: 256 SMTRNQMLAQTSMSMLKQSNSMSGMVMSLL 285
>gi|218902873|ref|YP_002450707.1| A-type flagellin [Bacillus cereus AH820]
gi|218536780|gb|ACK89178.1| A-type flagellin [Bacillus cereus AH820]
Length = 264
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 57/169 (33%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A+DN A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNHASDNPANIAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDALSMLRTAEAALQTVTNILQRMRDVAVQSANGTNSNKNRDSLNKEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T + Q
Sbjct: 123 YIGETTEFNDLSVFDGQNRPVTLDDIGHTVNITKHIPPSPTQHDINIST 171
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 26/238 (10%), Positives = 68/238 (28%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T + +
Sbjct: 27 MEHLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDALSMLRTAEAALQTVTNI 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + T T + + + L
Sbjct: 87 LQRMRDVAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + I+ ++ + +G++ +R+
Sbjct: 147 DIGHTVNITKHIPPSPTQHDINISTEQEARTAIRKIEEALQNVSLHRADLGAMMNRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + A+ R+ DADMA E + + ++A+ +S N + L
Sbjct: 207 IENLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSKLL 264
>gi|306516569|gb|ADM96173.1| FlaA [Campylobacter coli]
Length = 206
Score = 104 bits (257), Expect = 5e-20, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 79/205 (38%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNAKASADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 INNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + +
Sbjct: 122 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKASIGATQSSKIGLTRFETGSRISVGG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 182 EVQFTLKNYNGIDDFKFQKVVISTS 206
>gi|229149961|ref|ZP_04278189.1| Flagellin [Bacillus cereus m1550]
gi|228633642|gb|EEK90243.1| Flagellin [Bacillus cereus m1550]
Length = 269
Score = 104 bits (257), Expect = 5e-20, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 56/169 (33%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN + +A Q L + + V + +++G +++ A+DN A +I M + +
Sbjct: 6 IGTNVLSRNARQSLYENEKRMNVSMEHLATGKKLNHASDNPANVAIVTRMHTRASGMRMA 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L Q+
Sbjct: 66 IRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSANGTNSNKNRHSLNKEFQSLTEQIG 125
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T I Q
Sbjct: 126 YIGETTEFNDLSVFDGQNRPITLDDIDHTINMTKHIPPSPTQHDIKIST 174
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/243 (10%), Positives = 68/243 (27%)
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ KK A+ + A + +A G+ A + T +
Sbjct: 26 MNVSMEHLATGKKLNHASDNPANVAIVTRMHTRASGMRMAIRNNEDAISMLRTAEAALQT 85
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + + + T T + + +
Sbjct: 86 VTNILQRMRDLAVQSANGTNSNKNRHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRP 145
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
L + + + + + + + I+ ++ + +G++ +R
Sbjct: 146 ITLDDIDHTINMTKHIPPSPTQHDIKISTEQEARAALLKIEEALQSVSLHRADLGAMINR 205
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + A+ + DADMA E + + ++A+ +S N +
Sbjct: 206 LQFNIENLNNQSMALTDAASLIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSK 265
Query: 449 LFR 451
L +
Sbjct: 266 LLQ 268
>gi|317404774|gb|EFV85156.1| flagellin [Achromobacter xylosoxidans C54]
Length = 157
Score = 104 bits (257), Expect = 5e-20, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 50/138 (36%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + + + S+ + DA + ++ +
Sbjct: 18 HYLTDASGNANGEYVVSGSDGNFYDISISSTGEVSFKPKDAPPTVNLKVAPMKRVNNALG 77
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ G++G++ +R+ + + + R+ DAD A E++ L+ Q QQ +
Sbjct: 78 QVDSLRGELGAMQNRLGSVITNLNHTAGILSQARSRIEDADYAVETSNLTRQQILQQASK 137
Query: 434 QALSIVNNSTARILSLFR 451
AL+ N +L+L +
Sbjct: 138 VALTQANQLAQNVLALLK 155
>gi|188526919|ref|YP_001909606.1| flagellin B [Helicobacter pylori Shi470]
gi|308182289|ref|YP_003926416.1| flagellin B [Helicobacter pylori PeCan4]
gi|188143159|gb|ACD47576.1| flagellin B [Helicobacter pylori Shi470]
gi|308062976|gb|ADO04863.1| flagellin B [Helicobacter pylori Sat464]
gi|308064474|gb|ADO06366.1| flagellin B [Helicobacter pylori PeCan4]
Length = 514
Score = 104 bits (257), Expect = 5e-20, Method: Composition-based stats.
Identities = 58/510 (11%), Positives = 142/510 (27%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA- 62
I TN +A+++ N +L +++SSGLR++ AAD+++ +IA ++S + L
Sbjct: 5 INTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 63 -------------------------------VSDAIGLGS---------SKVDIAKAGMS 82
A G S + +
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELD 124
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA---------RGSSFNGENW 133
+ S ++ +G + + T +++ + + SSF+GE
Sbjct: 125 NIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIGSTSSDKIGHVRMETSSFSGEGM 184
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL------------DPETVLLDSST 181
L + + + + +D + T+ + +S
Sbjct: 185 LASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASY 244
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G ++ ++ +I + + + Q
Sbjct: 245 NVMATGGTPVQSGTVRDLTINGVEIGTVNDVHKNDADGRLINAINSVKDRTGVEASLDIQ 304
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A + + G + + + + +G + ++
Sbjct: 305 GRINLHSIDGRAISVHATSASGQVFGGGNFAGISGTQHAVIGRLTLTRTDARDIIVSGVN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G Y V+ + ++ + +
Sbjct: 365 FSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ D+ +GS+ + + I + + V+ ++ D D A ES
Sbjct: 425 MIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESAN 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|83721172|ref|YP_443690.1| flagellin [Burkholderia thailandensis E264]
gi|167582731|ref|ZP_02375605.1| flagellin [Burkholderia thailandensis TXDOH]
gi|167620846|ref|ZP_02389477.1| flagellin [Burkholderia thailandensis Bt4]
gi|3420943|gb|AAC31966.1| flagellin [Burkholderia thailandensis E264]
gi|83654997|gb|ABC39060.1| flagellin [Burkholderia thailandensis E264]
Length = 383
Score = 104 bits (257), Expect = 5e-20, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 91/229 (39%), Gaps = 3/229 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 1 MLGINSNLNSLVAQQNLNGSQSALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A +G++ + + I+ +D+ ++Q E+ Q S
Sbjct: 61 NQGVSNANDGVSILQTASSGLTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVAQQIS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG+N L G+ + + +V + D + + I L L
Sbjct: 121 EVNRIASQTNYNGKNILDGSAGTLSFQVGANVGQTVTVDLSQSMSAAKIGGGLVQTGQTL 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + G E + + + T + +T
Sbjct: 181 GTFKVAVDSSGAAWTASSTGQETTQINVLSDGKGGFTFTDQNNQTLSST 229
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 51/137 (37%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+++ +T+ S D + +N + + + + + + ID +
Sbjct: 247 TVTLNSAATSSLSAADQAAAAAMQTQVNAVNQPQTVSNLNISTQTGAYQAMVSIDNALAT 306
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G+ +R + + + + ++ AD A E+ LS Q QQ +
Sbjct: 307 VNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSADFAQETANLSRAQVLQQAGIS 366
Query: 435 ALSIVNNSTARILSLFR 451
L+ N+ ++L L +
Sbjct: 367 VLAQANSLPQQVLKLLQ 383
>gi|15611177|ref|NP_222828.1| flagellin B [Helicobacter pylori J99]
gi|217032794|ref|ZP_03438276.1| hypothetical protein HPB128_197g21 [Helicobacter pylori B128]
gi|298736941|ref|YP_003729471.1| flagellin [Helicobacter pylori B8]
gi|7387671|sp|Q9ZMV8|FLAB_HELPJ RecName: Full=Flagellin B; AltName: Full=Flagellin N
gi|4154614|gb|AAD05686.1| flagellin B [Helicobacter pylori J99]
gi|34811865|gb|AAQ82718.1| flagellin B [Helicobacter pylori NCTC 11637]
gi|51989336|gb|AAU21202.1| FlaB [Helicobacter pylori]
gi|216945513|gb|EEC24171.1| hypothetical protein HPB128_197g21 [Helicobacter pylori B128]
gi|298356135|emb|CBI67007.1| flagellin [Helicobacter pylori B8]
gi|317011960|gb|ADU82568.1| flagellin B [Helicobacter pylori Lithuania75]
Length = 514
Score = 104 bits (257), Expect = 5e-20, Method: Composition-based stats.
Identities = 58/510 (11%), Positives = 142/510 (27%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA- 62
I TN +A+++ N +L +++SSGLR++ AAD+++ +IA ++S + L
Sbjct: 5 INTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 63 -------------------------------VSDAIGLGS---------SKVDIAKAGMS 82
A G S + +
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELD 124
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA---------RGSSFNGENW 133
+ S ++ +G + + T +++ + + SSF+GE
Sbjct: 125 NIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIGSTSSDKIGHVRMETSSFSGEGM 184
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL------------DPETVLLDSST 181
L + + + + +D + T+ + +S
Sbjct: 185 LASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASY 244
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G ++ ++ +I + + + Q
Sbjct: 245 NVMATGGTPVQSGTVRELTINGVEIGTVNDVHKNDADGRLTNAINSVKDRTGVEASLDIQ 304
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A + + G + + + + +G + ++
Sbjct: 305 GRINLHSIDGRAISVHAASASGQVFGGGNFAGISGTQHAVIGRLTLTRTDARDIIVSGVN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G Y V+ + ++ + +
Sbjct: 365 FSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ D+ +GS+ + + I + + V+ ++ D D A ES
Sbjct: 425 MIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESAN 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|223040859|ref|ZP_03611124.1| flagellin B [Campylobacter rectus RM3267]
gi|222877890|gb|EEF13006.1| flagellin B [Campylobacter rectus RM3267]
Length = 505
Score = 104 bits (257), Expect = 5e-20, Method: Composition-based stats.
Identities = 66/501 (13%), Positives = 123/501 (24%), Gaps = 53/501 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQI----------- 52
I TN +A++ N NL + ++SSGLR+ AAD+A+ SIA
Sbjct: 5 INTNINALNTHANAVSNNRNLSLSLGKLSSGLRIQTAADDASGLSIADSLRSQASALGQA 64
Query: 53 -----------------MKSDNGALSAVSDAIGLGSSKVDIAKAG----------MSKAI 85
M L + + + M +
Sbjct: 65 IANGNDAIGIIQVADKAMDEQLKILDTIKMKATQSAQDGQTTDSRQALQADIVRLMEELD 124
Query: 86 DVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
++ +T + +K Q Q+ I +S T S
Sbjct: 125 NIGNTTSFNGQQLLNGTFSNKEFQIGAYSNQTVKASIGATTSDKIGLTRFESSALMTLSA 184
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVL---------------LDSSTDGTERYGLL 190
A S + V + + T Y +
Sbjct: 185 AGSKTTISLDFKFLNVDGVNDVTIAKSKIGTGLGQGLGDLVKNINKVSDKTGVRATYDVT 244
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
K V I A + + + V
Sbjct: 245 WIASKAIAAGNASSLTINGVKIGDLEIKEGDSNGALVNAINKVKDQTGVEASVNTEGRMV 304
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
A T + + S + N K S + S
Sbjct: 305 LTSRDGRAIQVTGKSGIFSNTKSKLSFGLVGRLNLVRLDGRDIKMSGSKFVSGKFSKGGN 364
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ S + + + + A + ++ ++
Sbjct: 365 FSTDGGAQKSVSMREIRGQIDKELATAMGFQRMSKVLSVAQSAGVMTLRGAMAVMDIAES 424
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
K +GS+ +++ + I + + V+ ++ D D A+ES S Q
Sbjct: 425 AQKTLDQIRSDLGSVQNQLVATVNNITVTQVNVKSAESQIRDVDFAAESANFSKFNILAQ 484
Query: 431 LAVQALSIVNNSTARILSLFR 451
A+S N+ +L L +
Sbjct: 485 SGSYAMSQANSVQQNVLRLLQ 505
>gi|299531269|ref|ZP_07044679.1| flagellin-like protein [Comamonas testosteroni S44]
gi|298720676|gb|EFI61623.1| flagellin-like protein [Comamonas testosteroni S44]
Length = 100
Score = 104 bits (257), Expect = 5e-20, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 43/100 (43%)
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
+ + + +D +K A +G++ SR + + + + + R++D
Sbjct: 1 MDIKSAESADNAILAMDAALKAVNGARATLGAVQSRFETTVENLSVNSENLSASRSRIMD 60
Query: 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
AD A+E+ LS Q QQ ++ N ++L L +G
Sbjct: 61 ADFAAETANLSRTQILQQAGTAMVAQANQLPQQVLKLLQG 100
>gi|14248766|gb|AAK57644.1|AF348135_2 LafA1 [Aeromonas caviae]
Length = 281
Score = 104 bits (257), Expect = 5e-20, Method: Composition-based stats.
Identities = 41/275 (14%), Positives = 88/275 (32%), Gaps = 3/275 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN ++++ +L + N L R+ +GLR++ AAD+AA +A +++ +
Sbjct: 3 LSIHTNFASLTTQNQLNNTNKMLGTAMQRLGTGLRINSAADDAAGLQMATRLQAQSNGQK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQ 118
S + A+ M + +++ +K+ T G D ++ +E +L +
Sbjct: 63 VGMRNAQDAISMMQTAEGAMDQMTNIVQRMKDLATQGANGTTSADDYTALNAEFGELTKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L +I +SF G+ L+ + + GS V D T +
Sbjct: 123 LGNIVNNTSFGGQKLLKGGSFEVATGVTFQIGGSSTETLKVDVTTAMKDLTGTTATNGIA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + ++ + +
Sbjct: 183 DGIGDQTKANAAITEMETFLKDIGSARSSFGANINRLEHTVNNLSNMKENTDMANGRIMD 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
D A+ + A + S ++
Sbjct: 243 ADFAQESTNMTKNQMLMQAGMSVVSNSNQMTGMVT 277
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/217 (14%), Positives = 72/217 (33%)
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
D + T + + + ++ Y + +
Sbjct: 65 MRNAQDAISMMQTAEGAMDQMTNIVQRMKDLATQGANGTTSADDYTALNAEFGELTKELG 124
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA 354
N + + + T S + L ++ + +T + D
Sbjct: 125 NIVNNTSFGGQKLLKGGSFEVATGVTFQIGGSSTETLKVDVTTAMKDLTGTTATNGIADG 184
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ ++ ++T +K +A G+ +R+ + + M++ + GR++DAD
Sbjct: 185 IGDQTKANAAITEMETFLKDIGSARSSFGANINRLEHTVNNLSNMKENTDMANGRIMDAD 244
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A EST ++ Q Q + +S N T + SL R
Sbjct: 245 FAQESTNMTKNQMLMQAGMSVVSNSNQMTGMVTSLLR 281
>gi|4581619|gb|AAD24676.1|AF078151_1 flagellin [Burkholderia pseudomallei]
gi|6166134|gb|AAD27808.2|AF111790_1 flagellin [Burkholderia mallei]
Length = 387
Score = 104 bits (257), Expect = 5e-20, Method: Composition-based stats.
Identities = 55/353 (15%), Positives = 119/353 (33%), Gaps = 3/353 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQGALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A +G++ + + I+ +D+ ++Q E+ Q S
Sbjct: 61 NQGVSNANDGVSILQTASSGLTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVAQQIS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG+N L G+ + + +V + D + I + L
Sbjct: 121 EVNRIASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVDLTQSMSAAKIGGGMVQTGQTL 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + G + E + + + T + +T A ++ A
Sbjct: 181 GTIKVAIDSSGAAWSSGSTGQETTQINVVSDGKGGFTFTDQNNQALSSTAVTAVFGSSTA 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
A + + L + + + + + + + +A S++ + T
Sbjct: 241 GTGTAASPSFQTLALSTSATSALSATDQANATAMVAQINAVNKPQTVSNLDISTQTGAYQ 300
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
T + + + + A
Sbjct: 301 AMVSIDNALATVNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSADFA 353
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/385 (11%), Positives = 108/385 (28%), Gaps = 6/385 (1%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ ++ ++ +S+AI +S+ K + D + + T++Q+Q+ + +G
Sbjct: 9 NSLVAQQNLNGSQGALSQAITRLSSGK-----RINSAADDAAGLAIATRMQTQINGLNQG 63
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + SS + + + + +
Sbjct: 64 VSNANDGVSILQTASSGLTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVAQQISEVN 123
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
R + + + V G + + ++ T I
Sbjct: 124 RIASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVDLTQSMSAAKIGGGMVQTGQTLGTI 183
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
AA ++ +T T+ S N+ S T
Sbjct: 184 KVAIDSSGAAWSSGSTGQETTQINVVSDGKGGFTFTDQNNQALSSTAVTAVFGSSTAGTG 243
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + T + ++ L + + + + + +
Sbjct: 244 TAASPSFQTLALSTSATSALSATDQANATAMVAQINAVNKPQT-VSNLDISTQTGAYQAM 302
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID + +G+ +R + + + + ++ AD A E+ LS
Sbjct: 303 VSIDNALATVNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSADFAQETANLSRA 362
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q QQ + L+ N+ ++L L
Sbjct: 363 QVLQQAGISVLAQANSLPQQVLKLL 387
>gi|87242328|gb|ABD33703.1| flagellin [Bacillus thuringiensis serovar aizawai]
Length = 326
Score = 104 bits (257), Expect = 5e-20, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L V++ G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVVANNTQDGISLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++ E L+ Q+ I+ + FN + L
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTNENQAALNKEFDALKEQIDYISTNTEFNDKKLLDGSN 120
Query: 139 GSSTASI 145
+
Sbjct: 121 KTIAVQT 127
Score = 66.3 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 43/132 (32%)
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
V + E+ D K + + + + K
Sbjct: 195 MKEFDKVKPFMSADDVKKIETKLEDYNKANDAGAQTAAQALGKEFATLTKLETTDLKANA 254
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ IDT +K + +G+ +R+ +K ++ ++ DADMA E +
Sbjct: 255 SGAIASIDTALKNIASNRATLGATLNRLDFNVYNLKSQSSSMASAASQIEDADMAKEMSE 314
Query: 422 LSALQTQQQLAV 433
++ + + +
Sbjct: 315 MTKFKILNEAGI 326
>gi|306516625|gb|ADM96201.1| FlaA [Campylobacter coli]
Length = 206
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 77/205 (37%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + +
Sbjct: 122 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRITSGG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 182 EVQFTLKNYNGIDDFQFQKVVISTS 206
>gi|210134318|ref|YP_002300757.1| flagellin B [Helicobacter pylori P12]
gi|308183911|ref|YP_003928044.1| flagellin B [Helicobacter pylori SJM180]
gi|210132286|gb|ACJ07277.1| flagellin B [Helicobacter pylori P12]
gi|307636807|gb|ADN79257.1| flagellin [Helicobacter pylori 908]
gi|308059831|gb|ADO01727.1| flagellin B [Helicobacter pylori SJM180]
gi|325996993|gb|ADZ49201.1| Flagellin B [Helicobacter pylori 2017]
Length = 514
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 58/510 (11%), Positives = 142/510 (27%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA- 62
I TN +A+++ N +L +++SSGLR++ AAD+++ +IA ++S + L
Sbjct: 5 INTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 63 -------------------------------VSDAIGLGS---------SKVDIAKAGMS 82
A G S + +
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELD 124
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA---------RGSSFNGENW 133
+ S ++ +G + + T +++ + + SSF+GE
Sbjct: 125 NIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIGSTSSDKIGHVRMETSSFSGEGM 184
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL------------DPETVLLDSST 181
L + + + + +D + T+ + +S
Sbjct: 185 LASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASY 244
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G ++ ++ +I + + + Q
Sbjct: 245 NVMATGGTPVQSGTVRELTINGVEIGTVNDVHKNDADGRLTNAINSVKDRTGVEASMDIQ 304
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A + + G + + + + +G + ++
Sbjct: 305 GRINLHSIDGRAISVHAASASGQVFGGGNFAGISGTQHAVIGRLTLTRTDARDIIVSGVN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G Y V+ + ++ + +
Sbjct: 365 FSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ D+ +GS+ + + I + + V+ ++ D D A ES
Sbjct: 425 MIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESAN 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|114054819|gb|ABI50010.1| FlaA [Clostridium botulinum]
Length = 246
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
N +++SSGLR++ A D+AA +I++ M+ L+ S S + A+
Sbjct: 1 NTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQASRNSQDAISLIQTAEG 60
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ ++ ++ D +++Q E+ +LQS++ I+ + FN ++ +
Sbjct: 61 ALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEINRISSQTQFNTKSLING 120
Query: 137 DLGSSTASIA 146
+ + ++
Sbjct: 121 AVSKTADAMT 130
Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 37/110 (33%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
++ T + + I + + N + + + ++ ID I +
Sbjct: 125 TADAMTFQIGANSGQTIKLTIGSMDAKTLKVDNIKLDDTAANVTKQIATIDNAINSVSKE 184
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
K+G+ +R+ + + ++ R+ D DMA E +
Sbjct: 185 RAKLGANQNRLEHTIANLDNSAENLQAAESRIRDVDMAKEMMNFTKTNIL 234
>gi|330986480|gb|EGH84583.1| flagellin [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 282
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 77/221 (34%), Gaps = 3/221 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA IA + S +
Sbjct: 3 LTVNTNVASLNVQKNLGRASDALSTSMTRLSSGLKINSAKDDAAGMQIATKITSQIRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ + ++ +++ ++ TD ++ E T + S+
Sbjct: 63 MAIKNANDGMSLAQTAEGALQESTNILQRMRELAVQSRNDSNSSTDRDALNKEFTAMSSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA+ ++ NG+N L + T + + S + +
Sbjct: 123 LTRIAQSTNLNGKNLLDGSASTMTFQVGSNSGASNQITLTLSASFDANTLGVGSAVTIAG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
S + E + + ST
Sbjct: 183 SDSATAETNFSAAIAAIDSALQTINSTRADLGAAQNRLTST 223
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 57/138 (41%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + S + ++ + A +D+ + ++ ID+ ++
Sbjct: 145 MTFQVGSNSGASNQITLTLSASFDANTLGVGSAVTIAGSDSATAETNFSAAIAAIDSALQ 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R+ ++ + + +GR+ D D A+E+ +L+ QT QQ +
Sbjct: 205 TINSTRADLGAAQNRLTSTISNLQNINENASAALGRVQDTDFAAETAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 SVLAQANQLPSAVLKLLQ 282
>gi|11095316|gb|AAG29829.1|AF307101_1 flagellin [Borrelia parkeri]
gi|11095318|gb|AAG29830.1|AF307102_1 flagellin [Borrelia parkeri]
gi|1311450|dbj|BAA11612.1| flagellin protein [Borrelia parkeri]
gi|51243474|gb|AAT99441.1| flagellin [Borrelia parkeri]
Length = 327
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNSINAANLRKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSAAQNIKTAE 149
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 17/162 (10%), Positives = 44/162 (27%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G W + + N + V N + + +
Sbjct: 166 GAQASWTLRVHVGANQDEAIAVNIYASNVANLFAGEGAQVSPAQEGAQQEGVQAAPAPAA 225
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + +S I+ I+ + +G+ +R+ + + +
Sbjct: 226 APAQGGVNSPVNVTTTVDANMSLSKIENAIRMVSDQRANLGAFQNRLESIKASTEYAIEN 285
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
++ ++ DA M E + Q A+ ++ N
Sbjct: 286 LKSSYAQIKDATMTDEIVASTTNSILTQSAMAMIAQANQVPQ 327
>gi|229121311|ref|ZP_04250542.1| Flagellin [Bacillus cereus 95/8201]
gi|228662156|gb|EEL17765.1| Flagellin [Bacillus cereus 95/8201]
Length = 266
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 56/169 (33%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A+DN A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNHASDNPANVAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + +A + +++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDAISMLRTVEASLQTVTNILQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T + Q
Sbjct: 123 YIGETTEFNDLSVFDGQNRPVTLDDIGHTVNITKHIPPSPTQHDINIST 171
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 70/239 (29%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 27 MEHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTVEASLQTVTNI 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + T T + + + L
Sbjct: 87 LQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + I+ ++ + +G++ +R+
Sbjct: 147 DIGHTVNITKHIPPSPTQHDINISTEQEARAAIRKIEEALQNVSLHRADLGAMINRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 207 IENLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSKLLQ 265
>gi|190890373|ref|YP_001976915.1| flagellin C protein [Rhizobium etli CIAT 652]
gi|190695652|gb|ACE89737.1| flagellin C protein [Rhizobium etli CIAT 652]
Length = 302
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 87/226 (38%), Positives = 117/226 (51%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN++AM+A Q LR IN L+ Q VSSG RV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNNAAMAALQTLRGINQGLQTTQAHVSSGYRVGKAADNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A + M AIDV+ IK K+ A E G D +Q EI+QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYSAMDSAIDVVGDIKAKLVAATENGVDKAKVQEEISQLQQQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ +SF+GENW+ G+ + GS + + + + +
Sbjct: 121 SIAQSASFSGENWVAGADGTKNVVASFVRDGSNAVSVVMTDYVLDDGSAGNVLFGMSNGA 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + V + + + + T K T
Sbjct: 181 VETSTGILGTSNGATGSVYAMDITNFTLGQIQTALTNVESALKSMT 226
Score = 90.6 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 51/106 (48%), Positives = 75/106 (70%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ +A ++ ++ +++ +K T+A +GSIS RI LQE+F+ + D+++ G
Sbjct: 197 SVYAMDITNFTLGQIQTALTNVESALKSMTSAGAALGSISKRIELQENFVNALSDSIDSG 256
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
VGRLVDA+M ES++LSALQTQQQLAVQ+LSI N+S+ ILSLFRG
Sbjct: 257 VGRLVDANMEEESSKLSALQTQQQLAVQSLSIANSSSQTILSLFRG 302
>gi|115381342|gb|ABI96354.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Panama]
Length = 220
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 73/215 (33%), Gaps = 3/215 (1%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ A I Q +D + + + T Y +
Sbjct: 121 NTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKDTAVTTTAYADNGTTLDVS 180
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + +++ K + +
Sbjct: 181 GLTDAAIKMATGGTTGTASVTGGAVKFDADNNKYF 215
>gi|253996291|ref|YP_003048355.1| flagellin domain-containing protein [Methylotenera mobilis JLW8]
gi|253982970|gb|ACT47828.1| flagellin domain protein [Methylotenera mobilis JLW8]
Length = 265
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 69/181 (38%), Gaps = 3/181 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I TN ++++ + L L R+SSGLR++ + D+AA +IA M S
Sbjct: 3 SVINTNIASLNTQRNLASSQSALNTSLQRLSSGLRINSSKDDAAGLAIATRMDSQVRGQQ 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S +A+ G++K D + ++ TD ++ +E TQL ++
Sbjct: 63 VAIRNANDAISFAQVAEGGLAKQTDALQRMRELAVQSLNGTNTSTDRANLDAEFTQLSAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ ++ + FNG + + A I + + +D
Sbjct: 123 VSRLSTATKFNGTSVFGAAQTFQVGADAGDTITTASVAAATISGNVSSVASASTAITAID 182
Query: 179 S 179
+
Sbjct: 183 A 183
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 43/99 (43%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ + ++ ID + A +G+I +R +++ + R++DA
Sbjct: 167 NVSSVASASTAITAIDAALTAANTNRATLGAIQNRFESVVSNLQISVENQAAAKSRIMDA 226
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
D A+E+ L+ Q QQ L+ N+ +LSL RG
Sbjct: 227 DFAAETANLTRGQILQQAGTAMLAQANSLPNNVLSLLRG 265
>gi|5107855|gb|AAD28527.2|AF128956_1 flagellin [Escherichia coli]
Length = 517
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 48/369 (13%), Positives = 102/369 (27%), Gaps = 6/369 (1%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA S+ L+ + G S +
Sbjct: 1 QSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+S+ + + I+ +D SIQ EI ++ ++ + FNG N L D
Sbjct: 61 LSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKD 120
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ + + D T + ++T T +
Sbjct: 121 GSMK-IQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGETANTAATLKDMSGFTAAAAP 179
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ AS A + A A + + +
Sbjct: 180 GGTVGVTQYTDKSAVASSVNILNAVAGANGNKVTTSADVGFGTPAAAVTYTYNKDTNSYS 239
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
A + ++ + + + + + + + +
Sbjct: 240 AASDDISSANLAAFLNPQARDTTKATVTIGGKDQDVNIDKSGNLTAADDGAVLYMDATGN 299
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA-- 375
+ + D++ L K + + T + M +T
Sbjct: 300 LTKNNAGGDTQATLAKVATATGAKAATIQTDKGTFTSDGTAFDGASMSIDANTFANAVKN 359
Query: 376 TAAAGKIGS 384
+G+
Sbjct: 360 DTYTATVGA 368
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/310 (11%), Positives = 79/310 (25%), Gaps = 2/310 (0%)
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+ +++A + + + K + D + L + + R
Sbjct: 208 NGNKVTTSADVGFGTPAAAVTYTYNKDTNSYSAASDDISSANLAAFLNPQARDTTKATVT 267
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ V D ++ A + AT
Sbjct: 268 IGGKDQDVNIDKSGNLTAADDGAVLYMDATGNLTKNNAGGDTQATLAKVATATGAKAATI 327
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
TS + S++ A + AT S + + +
Sbjct: 328 QTDKGTFTSDGTAFDGASMSIDANTFANAVKNDTYTATVGAKTYSVTTGSAAADTAYMSN 387
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME--EMVSFIDTQI 372
DT T + + + A + ++ +D I
Sbjct: 388 GVLSDTPPTYYAQADGSITTTEDAAAGKLVYKGSDGKLTTDTTSKAESTSDPLAALDDAI 447
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+G++ +R+ + + + R+ DAD A+E + +S Q QQ
Sbjct: 448 SQIDKFRSSLGAVQNRLDSAVTNLNNTTTNLFEAQSRIQDADYATEVSNMSKAQIIQQAG 507
Query: 433 VQALSIVNNS 442
L+ N
Sbjct: 508 NSVLAKANQV 517
>gi|261838983|gb|ACX98748.1| flagellin B [Helicobacter pylori 52]
Length = 514
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 58/510 (11%), Positives = 141/510 (27%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA- 62
I TN +A+++ N +L +++SSGLR++ AAD+++ +IA ++S + L
Sbjct: 5 INTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 63 -------------------------------VSDAIGLGS---------SKVDIAKAGMS 82
A G S + +
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRKALQSDIQRLLEELD 124
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA---------RGSSFNGENW 133
+ S ++ +G + + T +++ + + SSF+ E
Sbjct: 125 NIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIGSTSSDKIGHVRMETSSFSAEGM 184
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL------------DPETVLLDSST 181
L + + + + +D + T+ + +S
Sbjct: 185 LASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASY 244
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G ++ +K +I + + + Q
Sbjct: 245 NVMATGGTPVQSGTVKDLTINGVEIGTVNDVHKNDADGRLVNAINSVKDRTGVEASLDIQ 304
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A + + G + + + + +G + ++
Sbjct: 305 GRINLHSIDGRAISVHATSASGQVFGGGNFAGISGTQHAVIGRLTLTRTDARDIIVSGVN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G Y V+ + ++ + +
Sbjct: 365 FSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ D+ +GS+ + + I + + V+ ++ D D A ES
Sbjct: 425 MIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESAN 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|25990059|gb|AAN74969.1| flagellin [Helicobacter pylori]
Length = 514
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 58/510 (11%), Positives = 142/510 (27%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA- 62
I TN +A+++ N +L +++SSGLR++ AAD+++ +IA ++S + L
Sbjct: 5 INTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 63 -------------------------------VSDAIGLGS---------SKVDIAKAGMS 82
A G S + +
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELD 124
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA---------RGSSFNGENW 133
+ S ++ +G + + T +++ + + SSF+GE
Sbjct: 125 NIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIGSTSSDKIGHVRMETSSFSGEGM 184
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL------------DPETVLLDSST 181
L + + + + +D + T+ + +S
Sbjct: 185 LASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASY 244
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G ++ ++ +I + + + Q
Sbjct: 245 NVMATGGTPVQSGTVRELTINGVEIGTVNDVHKNDADGRLTNAINSVKDRTGVEASLDIQ 304
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A + + G + + + + +G + ++
Sbjct: 305 GRINLHSIDGRAISVHAASASGQVFGGGNFAGISGTQHAVIGRLTLTRADARDIIVSGVN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G Y V+ + ++ + +
Sbjct: 365 FSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ D+ +GS+ + + I + + V+ ++ D D A ES
Sbjct: 425 MIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESAN 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|261837569|gb|ACX97335.1| flagellin B [Helicobacter pylori 51]
Length = 514
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 58/510 (11%), Positives = 141/510 (27%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA- 62
I TN +A+++ N +L +++SSGLR++ AAD+++ +IA ++S + L
Sbjct: 5 INTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 63 -------------------------------VSDAIGLGS---------SKVDIAKAGMS 82
A G S + +
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRKALQSDIQRLLEELD 124
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA---------RGSSFNGENW 133
+ S ++ +G + + T +++ + + SSF+ E
Sbjct: 125 NIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIGSTSSDKIGHVRLETSSFSAEGM 184
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL------------DPETVLLDSST 181
L + + + + +D + T+ + +S
Sbjct: 185 LASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASY 244
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G ++ +K +I + + + Q
Sbjct: 245 NVMATGGTPVQSGTVKDLTINGVEIGTVNDVHKNDADGRLINAINSVKDRTGVEASLDIQ 304
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A + + G + + + + +G + ++
Sbjct: 305 GRINLHSIDGRAISVHATSASGQVFGGGNFAGISGTQHAVIGRLTLTRTDARDIIVSGVN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G Y V+ + ++ + +
Sbjct: 365 FSHVGLHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ D+ +GS+ + + I + + V+ ++ D D A ES
Sbjct: 425 MIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESAN 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|4581621|gb|AAD24677.1|AF078152_1 flagellin [Burkholderia pseudomallei]
Length = 387
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 53/302 (17%), Positives = 113/302 (37%), Gaps = 3/302 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQGALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A +G++ + + I+ +D+ ++Q E+ Q S
Sbjct: 61 NQGVSNANDGVSILQTASSGLTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVAQQIS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG+N L G+ + + +V + D + I + L
Sbjct: 121 EVNRIASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVDLTQSMSAAKIGGGMVQTGQTL 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + G + E + + + T + +T A ++ A
Sbjct: 181 GTIKVAIDSSGAAWSSGSTGQETTQINVVSDGKGGFTFTDQNNQALSSTAVTAVFGSSTA 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
A + + L + + + + + + + +A S++ + T
Sbjct: 241 GTGTAASPSFQTLALSTSATSALSATDQANATAMVAQINAVNKPQTVSNLDISTQTGAYQ 300
Query: 298 TS 299
Sbjct: 301 AM 302
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/385 (11%), Positives = 108/385 (28%), Gaps = 6/385 (1%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ ++ ++ +S+AI +S+ K + D + + T++Q+Q+ + +G
Sbjct: 9 NSLVAQQNLNGSQGALSQAITRLSSGK-----RINSAADDAAGLAIATRMQTQINGLNQG 63
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + SS + + + + +
Sbjct: 64 VSNANDGVSILQTASSGLTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVAQQISEVN 123
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
R + + + V G + + ++ T I
Sbjct: 124 RIASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVDLTQSMSAAKIGGGMVQTGQTLGTI 183
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
AA ++ +T T+ S N+ S T
Sbjct: 184 KVAIDSSGAAWSSGSTGQETTQINVVSDGKGGFTFTDQNNQALSSTAVTAVFGSSTAGTG 243
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + T + ++ L + + + + + +
Sbjct: 244 TAASPSFQTLALSTSATSALSATDQANATAMVAQINAVNKPQT-VSNLDISTQTGAYQAM 302
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID + +G+ +R + + + + ++ AD A E+ LS
Sbjct: 303 VSIDNALATVNNLQAMLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSADFAQETANLSRA 362
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q QQ + L+ N+ ++L L
Sbjct: 363 QVLQQAGISVLAQANSLPQQVLKLL 387
>gi|83717540|ref|YP_438353.1| flagellin D [Burkholderia thailandensis E264]
gi|257141384|ref|ZP_05589646.1| flagellin D [Burkholderia thailandensis E264]
gi|83651365|gb|ABC35429.1| flagellin D [Burkholderia thailandensis E264]
Length = 296
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 73/208 (35%), Gaps = 3/208 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN ++M L +L R+ +G R++ A+D+AA IA +KS + +
Sbjct: 1 MLSLHTNLASMRIQGALGRTQQDLTTSMTRLGTGYRINSASDDAAGLQIATRLKSQHLGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQS 117
+S + A+ + ++ + T + D S+Q E L +
Sbjct: 61 GVAFQNTQNATSMLQTAEGAFKEVEQILHRMNALATQAADSAWTQADRDSLQKEYDALGT 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L++I +S+ GE +T + I + +G+V + L
Sbjct: 121 ELKNIVDNTSYGGEKLFVAGASGATGGKLTEKLTFQIGNTSGEVMELDVSTALAAAVKAF 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKD 205
++ +
Sbjct: 181 GDASQVFGGGASGASGNTDITSISGANA 208
Score = 99.4 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 31/240 (12%), Positives = 70/240 (29%)
Query: 212 DASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
++ + + AT+ + A +Q A A + +
Sbjct: 57 HLGMGVAFQNTQNATSMLQTAEGAFKEVEQILHRMNALATQAADSAWTQADRDSLQKEYD 116
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
++ I S + + + G + E +
Sbjct: 117 ALGTELKNIVDNTSYGGEKLFVAGASGATGGKLTEKLTFQIGNTSGEVMELDVSTALAAA 176
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
K + + + ++ + + + +IG+ +R+
Sbjct: 177 VKAFGDASQVFGGGASGASGNTDITSISGANALLDNLSAALSAVGSLRAEIGAGQNRLTH 236
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + MRD + GR+ D D ASE+ ++ L QQ L + + +LSL +
Sbjct: 237 IANNLTNMRDNTQDAEGRIRDVDYASETANMTKLNILQQAGGSMLKQASQMSQLVLSLLQ 296
>gi|13182939|gb|AAK14995.1| flagellin [Bordetella bronchiseptica]
Length = 348
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 3/165 (1%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
L +R+SSGLR++ A D+AA +IA ++ L+ + G S +
Sbjct: 1 SQSALGSAIERLSSGLRINSAKDDAAGQAIANRFTANVKGLTQAARNANDGISIAQTTEG 60
Query: 80 GMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ + + I+ +D SIQ E+ Q ++ IA + FNG L++
Sbjct: 61 ALNEINNNLQRIRELTVQASNGTNSASDIDSIQQEVNQRLEEINRIAEQTDFNGIKVLKS 120
Query: 137 DLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ T SI + D + Y +
Sbjct: 121 NATDMTLSIQVGAKDNETIDIKIAANQSWNIYDAAGAIPGTQVNG 165
Score = 80.6 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/336 (11%), Positives = 80/336 (23%), Gaps = 6/336 (1%)
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
+ + Q+ + + G S A + + +
Sbjct: 13 SSGLRINSAKDDAAGQAIANRFTANVKGLTQAARNANDGISIAQTTEGALNEINNNLQRI 72
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
++T +DS + + + +K + + D + +I
Sbjct: 73 RELTVQASNGTNSASDIDSIQQEVNQRLEEINRIAEQTDFNGIKVLKSNATDMTLSIQVG 132
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
T + A G A + + +VAA
Sbjct: 133 AKDNETIDIKIAANQSWNIYDAAGAIPGTQVNGEARKVAALGFDVLSAAASTVAADTVSF 192
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI----- 335
+ + + + K
Sbjct: 193 DAAVAAAIAGHAGATGGEVRSYGDAANPQYAVVLADAGGDIAAYALTFDKDGKAALGDEL 252
Query: 336 -DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ T ANTD + +S +D +K +G+I +R
Sbjct: 253 GAVASQAALASTTVIANTDTVTVSGGNADALSKLDDAMKAVDEQRSSLGAIQNRFESTVA 312
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ + R+ D+D A+E + ++ Q QQ
Sbjct: 313 NLNNTITNLSAARSRIEDSDYATEVSNMTKNQILQQ 348
>gi|317010395|gb|ADU84142.1| flagellin B [Helicobacter pylori SouthAfrica7]
Length = 514
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 57/510 (11%), Positives = 141/510 (27%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA- 62
I TN +A+++ N +L +++SSGLR++ AAD+++ +IA ++S + L
Sbjct: 5 INTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 63 -------------------------------VSDAIGLGS---------SKVDIAKAGMS 82
A G S + +
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELD 124
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA---------RGSSFNGENW 133
+ S ++ +G + + T +++ + + SSF+G
Sbjct: 125 NIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIGSTSSDKIGHVRMETSSFSGAGM 184
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL------------DPETVLLDSST 181
L + + + + +D + T+ + +S
Sbjct: 185 LASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASY 244
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G ++ ++ +I + + + Q
Sbjct: 245 NVMATGGTPVQSGTVRELTINGVEIGTVNDVHKNDADGRLTNAINSVKDRTGVEASLDIQ 304
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A + + G + + + + +G + ++
Sbjct: 305 GRINLHSIDGRAISVHAASASGQVFGGGNFAGISGNEHAVIGRLTLTRTDARDIIVSGVN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G Y V+ + ++ + +
Sbjct: 365 FSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ D+ +GS+ + + I + + V+ ++ D D A ES
Sbjct: 425 MIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESAN 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|297379336|gb|ADI34223.1| Flagellin B [Helicobacter pylori v225d]
Length = 514
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 59/510 (11%), Positives = 143/510 (28%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA- 62
I TN +A+++ N +L +++SSGLR++ AAD+++ +IA ++S + L
Sbjct: 5 INTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 63 -------------------------------VSDAIGLGS---------SKVDIAKAGMS 82
A G S + +
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELD 124
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA---------RGSSFNGENW 133
+ S ++ +G + + T +++ + + SSF+GE
Sbjct: 125 NIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTIKASIGSTSSDKIGHVRMETSSFSGEGM 184
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL------------DPETVLLDSST 181
L + + + + +D + T+ + +S
Sbjct: 185 LASAAAQNLTEVGLNFKQVNGVNDYKIESVRISTSAGTGIGALSEIINRFSNTLGVRASY 244
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G ++ ++ +I + + + Q
Sbjct: 245 NVMATGGTPVQSGTVRDLTINGVEIGTVNDVHKNDADGRLTNAINSVKDRTGVEASLDIQ 304
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A + +S G + + + + +G + ++
Sbjct: 305 GRINLHSIDGRAISVHATSASSQVFGGGNFAGISGTQHAVIGRLTLTRTDARDIIVSGMN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G Y V+ + ++ + +
Sbjct: 365 FSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ D+ +GS+ + + I + + V+ ++ D D A ES
Sbjct: 425 MIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESAN 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|228958038|ref|ZP_04119774.1| Flagellin [Bacillus thuringiensis serovar pakistani str. T13001]
gi|228801663|gb|EEM48544.1| Flagellin [Bacillus thuringiensis serovar pakistani str. T13001]
Length = 154
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 49/113 (43%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G ++++A+DN A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNNASDNPANVAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ 116
S + A+A + ++++ +++ + + +L+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVMNILQRMRDLAVQSANGTNSNANRDLLNKELR 115
>gi|115381334|gb|ABI96350.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Muenchen]
gi|115381344|gb|ABI96355.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Saintpaul]
gi|115381346|gb|ABI96356.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Saintpaul]
gi|115381348|gb|ABI96357.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Saintpaul]
gi|115381350|gb|ABI96358.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Heidelberg]
gi|115381352|gb|ABI96359.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Coeln]
Length = 220
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAK 147
+ A
Sbjct: 121 NTLTIQVGAN 130
>gi|40645052|dbj|BAD06420.1| flagellin [Pseudomonas syringae pv. glycinea]
Length = 282
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 77/221 (34%), Gaps = 3/221 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA IA + S +
Sbjct: 3 LTVNTNAASLNVQKNLGRASDALSTSMTRLSSGLKINSAKDDAAGLQIATKITSQIRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ + ++ +++ ++ TD ++ E T + S+
Sbjct: 63 MAIKNANDGMSLAQTAEGALQESTNILQRMRELAVQSRNDSNSSTDRDALNKEFTAMSSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA+ ++ NG+N L + T + + S + +
Sbjct: 123 LTRIAQSTNLNGKNLLDGSASTMTFQVGSNSGASNQITLTLSASFDANTLGVGSAVTIAG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
S + E + + ST
Sbjct: 183 SDSTTAETNFSAAIAAIDSALQTINSTRADLGAAQNRLTST 223
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 57/138 (41%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + S + ++ + A +D+ + ++ ID+ ++
Sbjct: 145 MTFQVGSNSGASNQITLTLSASFDANTLGVGSAVTIAGSDSTTAETNFSAAIAAIDSALQ 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R+ ++ + + +GR+ D D A+E+ +L+ QT QQ +
Sbjct: 205 TINSTRADLGAAQNRLTSTISNLQNINENASAALGRVQDTDFAAETAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 SVLAQANQLPSAVLKLLQ 282
>gi|189164118|gb|ACD77166.1| flagellin C [Bacillus thuringiensis serovar entomocidus]
gi|189339462|gb|ACD89089.1| flagellin [Bacillus thuringiensis serovar entomocidus]
Length = 277
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 44/256 (17%), Positives = 88/256 (34%), Gaps = 3/256 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTAMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D+ S+ E L+S++
Sbjct: 68 ARNTQDAMSALRTGDAALGSISNILLRMRDLATQASNGTNNTEDTASLNKEYEALKSEID 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SFNG +L TD G + + S + TI ++
Sbjct: 128 HIADKTSFNGIKFLSTDKGGAADIKVQLSDASGDTMTIDSLNAKTITTDTLTTLADRATA 187
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + T A + A +
Sbjct: 188 ETEITKLDTAIQKIADERATFGSQLNRLDHNLNNVTSQATNMASAASQIEDADMAKEMSE 247
Query: 241 QAKGIATIPVPLPAAP 256
K +
Sbjct: 248 MTKFKILNEAGISMLS 263
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 23/210 (10%), Positives = 57/210 (27%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A+ L AA + S ++ + + +
Sbjct: 68 ARNTQDAMSALRTGDAALGSISNILLRMRDLATQASNGTNNTEDTASLNKEYEALKSEID 127
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ T + + + + ++
Sbjct: 128 HIADKTSFNGIKFLSTDKGGAADIKVQLSDASGDTMTIDSLNAKTITTDTLTTLADRATA 187
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
E ++ +DT I+ GS +R+ + + + ++ DADMA E +
Sbjct: 188 ETEITKLDTAIQKIADERATFGSQLNRLDHNLNNVTSQATNMASAASQIEDADMAKEMSE 247
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + + + LS N + + L +
Sbjct: 248 MTKFKILNEAGISMLSQANQTPQMVSKLLQ 277
>gi|87242404|gb|ABD33741.1| flagellin [Bacillus thuringiensis serovar silo]
Length = 346
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + +
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ G + K++ E L+ Q+ I++ + FN + L D
Sbjct: 61 NSVSNILLRMRDIANQSANGTNTGDNQKALDKEFAALKDQIDYISKNTEFNDKKLLNGDN 120
Query: 139 GSSTASI 145
S
Sbjct: 121 KSIAIQT 127
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 31/71 (43%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ ID+ + + +G+ +R+ + +K ++ ++ DADMA E + +
Sbjct: 276 AAIKSIDSALDTIASNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEM 335
Query: 423 SALQTQQQLAV 433
+ + + +
Sbjct: 336 TKFKILNEAGI 346
>gi|108809043|ref|YP_652959.1| putative flagellin [Yersinia pestis Antiqua]
gi|150260237|ref|ZP_01916965.1| lateral flagellin [Yersinia pestis CA88-4125]
gi|162419339|ref|YP_001604833.1| lateral flagellin [Yersinia pestis Angola]
gi|165924833|ref|ZP_02220665.1| lateral flagellin [Yersinia pestis biovar Orientalis str. F1991016]
gi|165939048|ref|ZP_02227600.1| lateral flagellin [Yersinia pestis biovar Orientalis str. IP275]
gi|166008687|ref|ZP_02229585.1| lateral flagellin [Yersinia pestis biovar Antiqua str. E1979001]
gi|166212019|ref|ZP_02238054.1| lateral flagellin [Yersinia pestis biovar Antiqua str. B42003004]
gi|167399108|ref|ZP_02304632.1| lateral flagellin [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167419274|ref|ZP_02311027.1| lateral flagellin [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167466324|ref|ZP_02331028.1| lateral flagellin [Yersinia pestis FV-1]
gi|218927924|ref|YP_002345799.1| putative flagellin [Yersinia pestis CO92]
gi|229837422|ref|ZP_04457585.1| lateral flagellin [Yersinia pestis Pestoides A]
gi|229840635|ref|ZP_04460794.1| lateral flagellin [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229842813|ref|ZP_04462965.1| lateral flagellin [Yersinia pestis biovar Orientalis str. India
195]
gi|294502800|ref|YP_003566862.1| putative flagellin [Yersinia pestis Z176003]
gi|108780956|gb|ABG15014.1| putative flagellin [Yersinia pestis Antiqua]
gi|115346535|emb|CAL19412.1| putative flagellin [Yersinia pestis CO92]
gi|149289645|gb|EDM39722.1| lateral flagellin [Yersinia pestis CA88-4125]
gi|162352154|gb|ABX86102.1| lateral flagellin [Yersinia pestis Angola]
gi|165913004|gb|EDR31629.1| lateral flagellin [Yersinia pestis biovar Orientalis str. IP275]
gi|165923033|gb|EDR40184.1| lateral flagellin [Yersinia pestis biovar Orientalis str. F1991016]
gi|165992026|gb|EDR44327.1| lateral flagellin [Yersinia pestis biovar Antiqua str. E1979001]
gi|166206765|gb|EDR51245.1| lateral flagellin [Yersinia pestis biovar Antiqua str. B42003004]
gi|166963268|gb|EDR59289.1| lateral flagellin [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051612|gb|EDR63020.1| lateral flagellin [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|229690080|gb|EEO82137.1| lateral flagellin [Yersinia pestis biovar Orientalis str. India
195]
gi|229697001|gb|EEO87048.1| lateral flagellin [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229705545|gb|EEO91555.1| lateral flagellin [Yersinia pestis Pestoides A]
gi|262360832|gb|ACY57553.1| putative flagellin [Yersinia pestis D106004]
gi|262364777|gb|ACY61334.1| putative flagellin [Yersinia pestis D182038]
gi|294353259|gb|ADE63600.1| putative flagellin [Yersinia pestis Z176003]
Length = 399
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 66/451 (14%), Positives = 120/451 (26%), Gaps = 54/451 (11%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN SA +A L + + R+S+G R++ ADNAA I M
Sbjct: 3 LSIHTNASAKTAINSLSNAGLSNAKSSQRLSTGFRINSPADNAAGLQITNRM-------E 55
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
++ G + + A + A + E +++ TQ +
Sbjct: 56 KFLNSAGQAKQNIQESIAMLQIADGGL----------AESVKTLNAMKKLATQAANDTNS 105
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
A + E + + + D + D E+ L
Sbjct: 106 AADREAIQKEFSELGKELQNALNNTEYNSEKLFADGGKMRKELNFQSGTDAESSLKLDLN 165
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
V+ V D + K + K F
Sbjct: 166 SVIAELTESVTKKATPVKADVAGSTLEKEADVLDKATKAAKKAKEAAEGVQKTLETDFAV 225
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A A+ + +P A T S + A +M ++ ++AT
Sbjct: 226 AGNKASAKITIPEYKDALGKTVPEVVINSGTAITPANSTQMKDAVAALKATHD------- 278
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ +K
Sbjct: 279 ------------------------------AAVKAEATFQAKNSTGGGVMNMQLADKDLA 308
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ + I A +G+ +R+ + + M + +G + D D A E
Sbjct: 309 MKADKKLSDVIDAYGAFRATLGANQNRLQSSSNNLDNMISNTAQALGSIKDTDFADEMKN 368
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + Q +V L N +T I +L +G
Sbjct: 369 HAQSEMLMQSSVMMLKKANAATQLISTLLQG 399
>gi|53720929|ref|YP_109915.1| flagellin [Burkholderia pseudomallei K96243]
gi|53724342|ref|YP_104383.1| flagellin [Burkholderia mallei ATCC 23344]
gi|67640474|ref|ZP_00439279.1| A-type flagellin [Burkholderia mallei GB8 horse 4]
gi|121599019|ref|YP_994726.1| flagellin [Burkholderia mallei SAVP1]
gi|124385373|ref|YP_001027651.1| flagellin [Burkholderia mallei NCTC 10229]
gi|126440156|ref|YP_001060864.1| flagellin [Burkholderia pseudomallei 668]
gi|126449375|ref|YP_001082621.1| flagellin [Burkholderia mallei NCTC 10247]
gi|126452490|ref|YP_001068172.1| flagellin [Burkholderia pseudomallei 1106a]
gi|134281472|ref|ZP_01768180.1| flagellin structural protein [Burkholderia pseudomallei 305]
gi|162210084|ref|YP_331507.2| flagellin [Burkholderia pseudomallei 1710b]
gi|167000419|ref|ZP_02266233.1| flagellin structural protein [Burkholderia mallei PRL-20]
gi|167721707|ref|ZP_02404943.1| flagellin [Burkholderia pseudomallei DM98]
gi|167740685|ref|ZP_02413459.1| flagellin [Burkholderia pseudomallei 14]
gi|167817898|ref|ZP_02449578.1| flagellin [Burkholderia pseudomallei 91]
gi|167826275|ref|ZP_02457746.1| flagellin [Burkholderia pseudomallei 9]
gi|167847782|ref|ZP_02473290.1| flagellin [Burkholderia pseudomallei B7210]
gi|167896371|ref|ZP_02483773.1| flagellin [Burkholderia pseudomallei 7894]
gi|167904744|ref|ZP_02491949.1| flagellin [Burkholderia pseudomallei NCTC 13177]
gi|167913025|ref|ZP_02500116.1| flagellin [Burkholderia pseudomallei 112]
gi|167920961|ref|ZP_02508052.1| flagellin [Burkholderia pseudomallei BCC215]
gi|217423907|ref|ZP_03455407.1| flagellin structural protein [Burkholderia pseudomallei 576]
gi|226193302|ref|ZP_03788912.1| flagellin structural protein [Burkholderia pseudomallei Pakistan 9]
gi|237814262|ref|YP_002898713.1| A-type flagellin [Burkholderia pseudomallei MSHR346]
gi|242318087|ref|ZP_04817103.1| flagellin structural protein [Burkholderia pseudomallei 1106b]
gi|254174756|ref|ZP_04881417.1| flagellin [Burkholderia mallei ATCC 10399]
gi|254183902|ref|ZP_04890493.1| flagellin structural protein [Burkholderia pseudomallei 1655]
gi|254186379|ref|ZP_04892896.1| flagellin structural protein [Burkholderia pseudomallei Pasteur
52237]
gi|254201455|ref|ZP_04907819.1| flagellin structural protein [Burkholderia mallei FMH]
gi|254206797|ref|ZP_04913148.1| flagellin structural protein [Burkholderia mallei JHU]
gi|254258000|ref|ZP_04949054.1| flagellin structural protein [Burkholderia pseudomallei 1710a]
gi|254298780|ref|ZP_04966231.1| flagellin structural protein [Burkholderia pseudomallei 406e]
gi|254357179|ref|ZP_04973453.1| flagellin structural protein [Burkholderia mallei 2002721280]
gi|5070224|gb|AAD39079.1|AF084814_2 flagellin [Burkholderia mallei]
gi|5070227|gb|AAD39081.1|AF084815_2 flagellin [Burkholderia mallei]
gi|1773063|gb|AAB40150.1| flagellin [Burkholderia pseudomallei]
gi|1773065|gb|AAB40151.1| flagellin [Burkholderia pseudomallei]
gi|1929918|gb|AAB51476.1| flagellin [Burkholderia pseudomallei 1026b]
gi|3337409|gb|AAC27441.1| flagellin [Burkholderia pseudomallei]
gi|3550354|gb|AAC34680.1| flagellin [Burkholderia pseudomallei]
gi|3550358|gb|AAC34682.1| flagellin [Burkholderia pseudomallei]
gi|52211343|emb|CAH37332.1| flagellin [Burkholderia pseudomallei K96243]
gi|52427765|gb|AAU48358.1| flagellin [Burkholderia mallei ATCC 23344]
gi|121227829|gb|ABM50347.1| flagellin [Burkholderia mallei SAVP1]
gi|124293393|gb|ABN02662.1| flagellin protein [Burkholderia mallei NCTC 10229]
gi|126219649|gb|ABN83155.1| flagellin structural protein [Burkholderia pseudomallei 668]
gi|126226132|gb|ABN89672.1| flagellin structural protein [Burkholderia pseudomallei 1106a]
gi|126242245|gb|ABO05338.1| flagellin protein [Burkholderia mallei NCTC 10247]
gi|134247139|gb|EBA47225.1| flagellin structural protein [Burkholderia pseudomallei 305]
gi|147747349|gb|EDK54425.1| flagellin structural protein [Burkholderia mallei FMH]
gi|147752339|gb|EDK59405.1| flagellin structural protein [Burkholderia mallei JHU]
gi|148026243|gb|EDK84328.1| flagellin structural protein [Burkholderia mallei 2002721280]
gi|157808537|gb|EDO85707.1| flagellin structural protein [Burkholderia pseudomallei 406e]
gi|157934064|gb|EDO89734.1| flagellin structural protein [Burkholderia pseudomallei Pasteur
52237]
gi|160695801|gb|EDP85771.1| flagellin [Burkholderia mallei ATCC 10399]
gi|184214434|gb|EDU11477.1| flagellin structural protein [Burkholderia pseudomallei 1655]
gi|217392970|gb|EEC32992.1| flagellin structural protein [Burkholderia pseudomallei 576]
gi|225934902|gb|EEH30879.1| flagellin structural protein [Burkholderia pseudomallei Pakistan 9]
gi|237505912|gb|ACQ98230.1| A-type flagellin [Burkholderia pseudomallei MSHR346]
gi|238521190|gb|EEP84643.1| A-type flagellin [Burkholderia mallei GB8 horse 4]
gi|242141326|gb|EES27728.1| flagellin structural protein [Burkholderia pseudomallei 1106b]
gi|243063611|gb|EES45797.1| flagellin structural protein [Burkholderia mallei PRL-20]
gi|254216689|gb|EET06073.1| flagellin structural protein [Burkholderia pseudomallei 1710a]
Length = 388
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 55/353 (15%), Positives = 119/353 (33%), Gaps = 3/353 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQGALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A +G++ + + I+ +D+ ++Q E+ Q S
Sbjct: 61 NQGVSNANDGVSILQTASSGLTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVAQQIS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG+N L G+ + + +V + D + I + L
Sbjct: 121 EVNRIASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVDLTQSMSAAKIGGGMVQTGQTL 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + G + E + + + T + +T A ++ A
Sbjct: 181 GTIKVAIDSSGAAWSSGSTGQETTQINVVSDGKGGFTFTDQNNQALSSTAVTAVFGSSTA 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
A + + L + + + + + + + +A S++ + T
Sbjct: 241 GTGTAASPSFQTLALSTSATSALSATDQANATAMVAQINAVNKPQTVSNLDISTQTGAYQ 300
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
T + + + + A
Sbjct: 301 AMVSIDNALATVNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSADFA 353
Score = 82.9 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 45/386 (11%), Positives = 109/386 (28%), Gaps = 6/386 (1%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ ++ ++ +S+AI +S+ K + D + + T++Q+Q+ + +G
Sbjct: 9 NSLVAQQNLNGSQGALSQAITRLSSGK-----RINSAADDAAGLAIATRMQTQINGLNQG 63
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + SS + + + + +
Sbjct: 64 VSNANDGVSILQTASSGLTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVAQQISEVN 123
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
R + + + V G + + ++ T I
Sbjct: 124 RIASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVDLTQSMSAAKIGGGMVQTGQTLGTI 183
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
AA ++ +T T+ S N+ S T
Sbjct: 184 KVAIDSSGAAWSSGSTGQETTQINVVSDGKGGFTFTDQNNQALSSTAVTAVFGSSTAGTG 243
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + T + ++ L + + + + + +
Sbjct: 244 TAASPSFQTLALSTSATSALSATDQANATAMVAQINAVNKPQT-VSNLDISTQTGAYQAM 302
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID + +G+ +R + + + + ++ AD A E+ LS
Sbjct: 303 VSIDNALATVNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSADFAQETANLSRA 362
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ + L+ N+ ++L L +
Sbjct: 363 QVLQQAGISVLAQANSLPQQVLKLLQ 388
>gi|228907392|ref|ZP_04071250.1| Flagellin [Bacillus thuringiensis IBL 200]
gi|228852253|gb|EEM97049.1| Flagellin [Bacillus thuringiensis IBL 200]
Length = 269
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 57/169 (33%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + + +G +++ A+DN A +I M + +
Sbjct: 6 IGTNVLSMNARQSLYENEKRMNVAMEHLVTGKKLNTASDNPANVAIVTRMYARASGMRVA 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ +E L Q+
Sbjct: 66 IRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSANGTNSNKNRHSLNTEFQSLAEQIG 125
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T + Q
Sbjct: 126 YIGETTEFNDLSVFDGQNRPITLDDIGHTVHISKSIPPSPTQHDIKIST 174
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 72/239 (30%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
++ KK A+ + A + + +A G+ A + T + +
Sbjct: 30 MEHLVTGKKLNTASDNPANVAIVTRMYARASGMRVAIRNNEDAISMLRTAEAALQTVTNI 89
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + T T + + + L
Sbjct: 90 LQRMRDLAVQSANGTNSNKNRHSLNTEFQSLAEQIGYIGETTEFNDLSVFDGQNRPITLD 149
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + ++ + + + + + I+ ++ +GS+ +R+
Sbjct: 150 DIGHTVHISKSIPPSPTQHDIKISTEQEARAAILKIEEALQNVLLHRADLGSMINRLQFN 209
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ ++ DADMA E + + ++A+ +S N + L +
Sbjct: 210 IENLNSQSMALTDTASQVEDADMAQEISDFLKFKLLTEVALSMVSQANQIPQMVSKLLQ 268
>gi|302185571|ref|ZP_07262244.1| flagellin [Pseudomonas syringae pv. syringae 642]
Length = 282
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 77/221 (34%), Gaps = 3/221 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA IA + S +
Sbjct: 3 LTVNTNVASLNVQKNLGRASDALSTSMTRLSSGLKINSAKDDAAGLQIATKITSQIRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ + ++ +++ ++ TD ++ E T + S+
Sbjct: 63 MAIKNANDGMSLAQTAEGALQESTNILQRMRELAVQSRNDSNSSTDRDALNKEFTAMSSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L I++ ++ NG+N L + T + + S + +
Sbjct: 123 LTRISQSTNLNGKNLLDGSASTMTFQVGSNSGASNQITLTLSASFDANTLGVGSAISIAG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
S + E + + ST
Sbjct: 183 SDSAAAEAAFSGAMAAIDSALQTINSTRADLGASQNRLTST 223
Score = 76.7 bits (186), Expect = 8e-12, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 58/138 (42%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + S + ++ + A +D+ + A ++ ID+ ++
Sbjct: 145 MTFQVGSNSGASNQITLTLSASFDANTLGVGSAISIAGSDSAAAEAAFSGAMAAIDSALQ 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R+ ++ + + +GR+ D D A+E+ +L+ QT QQ +
Sbjct: 205 TINSTRADLGASQNRLTSTISNLQNINENASAALGRVQDTDFAAETAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 SVLAQANQLPSAVLKLLQ 282
>gi|206896204|ref|YP_002246674.1| flagellin protein [Coprothermobacter proteolyticus DSM 5265]
gi|206738821|gb|ACI17899.1| flagellin protein [Coprothermobacter proteolyticus DSM 5265]
Length = 351
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 85/189 (44%), Gaps = 3/189 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I +N A++A LR I ++ + Q R+++G R++ AAD+ A + IA + + + LS
Sbjct: 7 SRINSNIGALNALNSLRIIQNDMALRQLRLATGNRITQAADDPAGFRIAVKLNARSRGLS 66
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQ 118
D IG + + A+ G++K D++ TI++K+ +G + +I ++ + +
Sbjct: 67 QAVDNIGDARNMLSTAETGLTKIKDLLLTIRDKLVSGANDTLGSEERLAIAQQVREYMHE 126
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ +A + +N L +++ + A + D + I + + + +
Sbjct: 127 ITRLAHETRWNDIGLLDDSSPAASTTTASTTFYFQTGSDANETTIWSRGFKIVTTPFTEN 186
Query: 179 SSTDGTERY 187
Sbjct: 187 DWNVNWTTA 195
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 53/336 (15%), Positives = 105/336 (31%)
Query: 116 QSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
+ L + + LR G+ A G I +
Sbjct: 16 LNALNSLRIIQNDMALRQLRLATGNRITQAADDPAGFRIAVKLNARSRGLSQAVDNIGDA 75
Query: 176 LLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
ST T + D I+ + + + + + + + +
Sbjct: 76 RNMLSTAETGLTKIKDLLLTIRDKLVSGANDTLGSEERLAIAQQVREYMHEITRLAHETR 135
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
+ A+ T + + + W T
Sbjct: 136 WNDIGLLDDSSPAASTTTASTTFYFQTGSDANETTIWSRGFKIVTTPFTENDWNVNWTTA 195
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
+ T + T + T+ D+ S ++ + V + +D+
Sbjct: 196 AATLEVKLTTAANTASVQTYKVYDSASGSVSASASFSVADVYAAFGVAQQAGIGSASDST 255
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
N ++ ++ +D I+ + IG++S+R+ + + M+ VE R+ +ADM
Sbjct: 256 NVSASVNALIKNVDAAIRGVSDWIAGIGALSARLDTKAQSVSAMQVNVEASYNRIFNADM 315
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A E +L+ Q QQ AV LS N + +IL+LFR
Sbjct: 316 AYEQLQLTKAQILQQTAVAMLSQANLAPQQILTLFR 351
>gi|49477318|ref|YP_035878.1| flagellin [Bacillus thuringiensis serovar konkukian str. 97-27]
gi|49328874|gb|AAT59520.1| flagellin [Bacillus thuringiensis serovar konkukian str. 97-27]
Length = 266
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 57/169 (33%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + ++G +++ A+DN A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHFATGKKLNHASDNPANVAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + ++++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVMNILQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T + +
Sbjct: 123 YIGETTEFNDLSVFDGQNRPVTLDDIGHTVNVTKHTSPSPTKHDIKIST 171
Score = 94.4 bits (232), Expect = 4e-17, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 67/239 (28%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T +
Sbjct: 27 MEHFATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVMNI 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + T T + + + L
Sbjct: 87 LQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + I+ ++ + G++ +R+
Sbjct: 147 DIGHTVNVTKHTSPSPTKHDIKISTEQEARAAIRKIEEALQNVSLHRADFGAMINRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 207 IENLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSKLLQ 265
>gi|317179922|dbj|BAJ57708.1| flagellin B [Helicobacter pylori F32]
Length = 514
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 57/510 (11%), Positives = 140/510 (27%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA- 62
I TN +A+++ N +L +++SSGLR++ AAD+++ +IA ++S + L
Sbjct: 5 INTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 63 -------------------------------VSDAIGLGS---------SKVDIAKAGMS 82
A G S + +
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELD 124
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA---------RGSSFNGENW 133
+ S ++ +G + + T +++ + + SSF+ E
Sbjct: 125 NIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIGSTSSDKIGHVRMETSSFSAEGM 184
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL------------DPETVLLDSST 181
L + + + + +D + T+ + +S
Sbjct: 185 LASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASY 244
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G ++ +K +I + + + Q
Sbjct: 245 NVMATGGTPVQSGTVKDLTINGVEIGTVNDVHKNDADGRLINAINSVKDRTGVEASLDIQ 304
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + + + G + + + + +G + ++
Sbjct: 305 GRINLHSIDGRAISVHTTSASGQVFGGGNFAGISGTQHAVIGRLTLTRTDARDIIVSGVN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G Y V+ + ++ + +
Sbjct: 365 FSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ D+ +GS+ + + I + + V+ ++ D D A ES
Sbjct: 425 MIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESAN 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|332672957|gb|AEE69774.1| flagellin B [Helicobacter pylori 83]
Length = 514
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 58/510 (11%), Positives = 141/510 (27%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA- 62
I TN +A+++ N +L +++SSGLR++ AAD+++ +IA ++S + L
Sbjct: 5 INTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 63 -------------------------------VSDAIGLGS---------SKVDIAKAGMS 82
A G S + +
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRKALQSDIQRLLEELD 124
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA---------RGSSFNGENW 133
+ S ++ +G + + T +++ + + SSF+ E
Sbjct: 125 NIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIGSTSSDKIGHVRMETSSFSAEGM 184
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL------------DPETVLLDSST 181
L + + + + +D + T+ + +S
Sbjct: 185 LASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASY 244
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G ++ +K +I + + + Q
Sbjct: 245 NVMATGGTPVQSGTVKDLTINGVEIGTVNDVHKNDADGRLTNAINSVKDRTGVEASLDIQ 304
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A + + G + + + + +G + ++
Sbjct: 305 GRINLHSIDGRAISVHATSASGQVFGGGNFAGISGTQHAVIGRLTLTRTDARDIIVSGVN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G Y V+ + ++ + +
Sbjct: 365 FSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ D+ +GS+ + + I + + V+ ++ D D A ES
Sbjct: 425 MIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESAN 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|229166615|ref|ZP_04294367.1| Flagellin [Bacillus cereus AH621]
gi|228616869|gb|EEK73942.1| Flagellin [Bacillus cereus AH621]
Length = 358
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R+++A+D+AA +IA M++ L ++ G
Sbjct: 1 MRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + A + ++ +++ +++ + +++Q E QL+ Q+ IA +
Sbjct: 61 MSLIRTADSALNSVSNILLRMRDIANQSANGTNTADNQQALQKEFGQLKEQISYIADNTE 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL 170
FN + L+ D ++ + I D V + +
Sbjct: 121 FNDKTLLKADNSVKIQTLDSADTNKQISIDLKGVTLNQLGLDT 163
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 28/308 (9%), Positives = 76/308 (24%)
Query: 144 SIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
+A + + + + + + + + +
Sbjct: 51 GVAANNTQDGMSLIRTADSALNSVSNILLRMRDIANQSANGTNTADNQQALQKEFGQLKE 110
Query: 204 KDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTS 263
+ ++ + K + A L +
Sbjct: 111 QISYIADNTEFNDKTLLKADNSVKIQTLDSADTNKQISIDLKGVTLNQLGLDTVNIGSEK 170
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
++ S + + A A ++ + + + V+
Sbjct: 171 LSAESLNVAKATMARLVKADQNADPSTFALDVNTAKESFDKIKGFITNKTNVQNVENAFN 230
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
K + N A V ID +K + +G
Sbjct: 231 DYTVADPADKADKADAIQAAFNTAITGLVAATPNTSNPSSAVDSIDAALKTVASNRATLG 290
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
+ +R+ + +K ++ ++ DADMA E + ++ + + + LS N +
Sbjct: 291 ATLNRLDFNVNNLKSQSASMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTP 350
Query: 444 ARILSLFR 451
+ L +
Sbjct: 351 QMVSKLLQ 358
>gi|108562540|ref|YP_626856.1| flagellin B [Helicobacter pylori HPAG1]
gi|107836313|gb|ABF84182.1| flagellin B [Helicobacter pylori HPAG1]
Length = 514
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 58/510 (11%), Positives = 142/510 (27%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA- 62
I TN +A+++ N +L +++SSGLR++ AAD+++ +IA ++S + L
Sbjct: 5 INTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 63 -------------------------------VSDAIGLGS---------SKVDIAKAGMS 82
A G S + +
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELD 124
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA---------RGSSFNGENW 133
+ S ++ +G + + T +++ + + SSF+GE
Sbjct: 125 NIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIGSTSSDKIGHVRMETSSFSGEGM 184
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL------------DPETVLLDSST 181
L + + + + +D + T+ + +S
Sbjct: 185 LASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASY 244
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G ++ ++ +I + + + Q
Sbjct: 245 NVMATGGTPVQSGTVRELTINGVEIGTVNDVHKNDADGRLTNAINSVKDRTGVEASLDIQ 304
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A + + G + + + + +G + ++
Sbjct: 305 GRINLHSIDGRAISVHAASASGQVFGGGNFAGISGTQHAVIGRLTLTRTDARDIIVSGVN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G Y V+ + ++ + +
Sbjct: 365 FSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ D+ +GS+ + + I + + V+ ++ D D A ES
Sbjct: 425 MIVMDMADSARTQLDKIRSDMGSVQMELITTINNISVTQVNVKAAESQIRDVDFAEESAN 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|254473468|ref|ZP_05086865.1| flAgellin a protein [Pseudovibrio sp. JE062]
gi|211957584|gb|EEA92787.1| flAgellin a protein [Pseudovibrio sp. JE062]
Length = 382
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 72/137 (52%), Positives = 100/137 (72%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+S+LTN SAM A LR IN ++ Q+R+S+G+RV+DA+DNAAYWSIA MKSDN AL
Sbjct: 1 MSSLLTNSSAMVALTTLRGINDSMATTQNRISTGMRVADASDNAAYWSIATTMKSDNSAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV D++GLG++ VD+A M + +D++S IK+K+TA D IQ++I QLQ QL
Sbjct: 61 SAVKDSLGLGAATVDVAFTAMDQTVDIVSQIKDKLTAATNGTVDRGKIQADIEQLQKQLE 120
Query: 121 DIARGSSFNGENWLRTD 137
IA ++F+GENWL+ +
Sbjct: 121 TIASSATFSGENWLQQN 137
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 65/89 (73%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ +D Q+ T AA ++GS +R+ +Q++F + DA+++G+G+LVDADM +ESTRL
Sbjct: 294 AYIDVVDGQLSAITDAATELGSAKARVDMQKEFASNLSDAIDRGIGQLVDADMNAESTRL 353
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
ALQTQQQL +QALSI N+ + ILSLFR
Sbjct: 354 QALQTQQQLGIQALSIANSGSQNILSLFR 382
>gi|255016860|ref|ZP_05288986.1| flagellin [Listeria monocytogenes FSL F2-515]
Length = 218
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 60/146 (41%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN ++ + LR N + Q+R++SG R++ + D+AA ++ M + L A
Sbjct: 3 VNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S +G + A + +S ++ ++ D K +E L +L
Sbjct: 63 SKNSSMGIDLLQTADSALSSMSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKELD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
+A +++N L + ++
Sbjct: 123 HVADTTNYNNIKLLDQTATGAATQVS 148
>gi|115381302|gb|ABI96334.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Zanzibar]
gi|115381304|gb|ABI96335.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Kottbus]
Length = 220
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAK 147
+ A
Sbjct: 121 NTLTIQVGAN 130
>gi|217034686|ref|ZP_03440090.1| hypothetical protein HP9810_882g13 [Helicobacter pylori 98-10]
gi|32186920|gb|AAP72265.1| flagellin B [Helicobacter pylori]
gi|216942857|gb|EEC22350.1| hypothetical protein HP9810_882g13 [Helicobacter pylori 98-10]
gi|317176936|dbj|BAJ54725.1| flagellin B [Helicobacter pylori F16]
gi|317179503|dbj|BAJ57291.1| flagellin B [Helicobacter pylori F30]
gi|317181411|dbj|BAJ59195.1| flagellin B [Helicobacter pylori F57]
Length = 514
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 58/510 (11%), Positives = 141/510 (27%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA- 62
I TN +A+++ N +L +++SSGLR++ AAD+++ +IA ++S + L
Sbjct: 5 INTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 63 -------------------------------VSDAIGLGS---------SKVDIAKAGMS 82
A G S + +
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRKALQSDIQRLLEELD 124
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA---------RGSSFNGENW 133
+ S ++ +G + + T +++ + + SSF+ E
Sbjct: 125 NIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIGSTSSDKIGHVRMETSSFSAEGM 184
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL------------DPETVLLDSST 181
L + + + + +D + T+ + +S
Sbjct: 185 LASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASY 244
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G ++ +K +I + + + Q
Sbjct: 245 NVMATGGTPVQSGTVKDLTINGVEIGTVNDVHKNDADGRLINAINSVKDRTGVEASLDIQ 304
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A + + G + + + + +G + ++
Sbjct: 305 GRINLHSIDGRAISVHATSASGQVFGGGNFAGISGTQHAVIGRLTLTRTDARDIIVSGVN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G Y V+ + ++ + +
Sbjct: 365 FSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ D+ +GS+ + + I + + V+ ++ D D A ES
Sbjct: 425 MIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESAN 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|228933043|ref|ZP_04095906.1| Flagellin [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228826644|gb|EEM72415.1| Flagellin [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 266
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 57/167 (34%), Gaps = 3/167 (1%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
TN +M+A Q L + + V + +++G +++ A+DN A +I M + +
Sbjct: 5 TNVLSMNARQSLYENEKRMNVAMEHLATGKKLNHASDNPANIAIVTRMHARASGMRVAIR 64
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDI 122
S + A+A + ++++ +++ + S+ E L Q+ I
Sbjct: 65 NNEDAISMLRTAEAALQNVMNILQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYI 124
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
+ FN + T + Q
Sbjct: 125 GETTEFNDLSVFDGQNRPVTLDDIGHTVNITKHIPPSPTQHDIKIST 171
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 27/239 (11%), Positives = 68/239 (28%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T +
Sbjct: 27 MEHLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQNVMNI 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + T T + + + L
Sbjct: 87 LQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + I+ ++ + +GS+ +R+
Sbjct: 147 DIGHTVNITKHIPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGSMMNRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 207 IENLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQVVSKLLQ 265
>gi|228964743|ref|ZP_04125850.1| Flagellin [Bacillus thuringiensis serovar sotto str. T04001]
gi|228794993|gb|EEM42492.1| Flagellin [Bacillus thuringiensis serovar sotto str. T04001]
Length = 269
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 58/169 (34%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+M+A Q + + V + +++G ++++A+DN A +I M + +
Sbjct: 6 ISTNISSMNARQSFYENEKRMNVAMEHLATGKKLNNASDNPANVAIVTRMHARASGMRVT 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L Q+
Sbjct: 66 IRNNEDAISMLRTAEAALQTVTNILKRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIG 125
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T I Q
Sbjct: 126 YIGETTEFNDLSVFDGQNRPVTLDDIGHTINMTKHIPPSPTQHDIKIST 174
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/268 (10%), Positives = 73/268 (27%)
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + ++ + KK A+ + A + +A
Sbjct: 1 MSIMRISTNISSMNARQSFYENEKRMNVAMEHLATGKKLNNASDNPANVAIVTRMHARAS 60
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
G+ A + T + + + + +
Sbjct: 61 GMRVTIRNNEDAISMLRTAEAALQTVTNILKRMRDLAVQSANGTNSNKNRDSLNKEFQSL 120
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
T T + + + L + + + + + +
Sbjct: 121 TEQIGYIGETTEFNDLSVFDGQNRPVTLDDIGHTINMTKHIPPSPTQHDIKISTEQEARA 180
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ I+ ++ + +GS+ +R+ + + A+ R+ DADMA E +
Sbjct: 181 AIRKIEEALQNVSLHRTDLGSMINRLQFNIENLNSQSMALTDAASRIEDADMAQEMSDFL 240
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++A+ +S N + L +
Sbjct: 241 KFKLLTEVALSMVSQANQIPQMVSKLLQ 268
>gi|306516589|gb|ADM96183.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 44/205 (21%), Positives = 76/205 (37%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNAKANSDLNSRALDQSLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I S + + + S
Sbjct: 122 NIANTTSFNGKQLLSGGFTNQEFQIGSSSNQTIKASIGATQSSKIGVTRFETGSQSFSSG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
T G +
Sbjct: 182 TVGLTIKNYNGIEDFKFQNVVISTS 206
>gi|1311448|dbj|BAA11611.1| flagellin protein [Borrelia turicatae]
gi|51243472|gb|AAT99440.1| flagellin [Borrelia turicatae]
Length = 327
Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS
Sbjct: 3 INHNTSAINASRNNSINAANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + + + +++ V+ +K D SIQ EI QL ++
Sbjct: 63 SRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 123 RIADQAQYNQMHMLSNKSAAQNIKTAE 149
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 18/162 (11%), Positives = 45/162 (27%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G+ W + + N A V N + + +
Sbjct: 166 GSQASWTLRVHVGANQDEAIAVNIYAANVANLFAGEGAQVSPAQEGAQQEGVQAAPAPAA 225
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + +S I+ I+ + +G+ +R+ + + +
Sbjct: 226 APAQGGVNSPVNVTTTIDANMSLSKIENAIRMVSDQRANLGAFQNRLESIKASTEYAIEN 285
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
++ ++ DA M E + Q A+ ++ N
Sbjct: 286 LKSSYAQIQDATMTDEIVASTTNSILTQSAMAMIAQANQVPQ 327
>gi|115381308|gb|ABI96337.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Zanzibar]
Length = 220
Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAK 147
+ A
Sbjct: 121 NTLTIQVGAN 130
>gi|34498466|ref|NP_902681.1| flagellin D [Chromobacterium violaceum ATCC 12472]
gi|34104321|gb|AAQ60680.1| flagellin D [Chromobacterium violaceum ATCC 12472]
Length = 372
Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 50/372 (13%), Positives = 113/372 (30%), Gaps = 3/372 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN +A++ + L R+ +GLR++ A D+AA IA + + + +
Sbjct: 1 MLSLHTNIAALNTKSNMNSTQGALSTSMTRLGTGLRINSAMDDAAGLQIATRLDAQSRGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQS 117
+ G S + A+ +++ +++ +K+ T G D ++Q+E QL
Sbjct: 61 TVAMKNAQNGISMLQTAEGALNEVTNILQRMKDLGTEGANGTTTAADKTAMQAEFDQLGK 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L +I + +SF GE L+ +S S + + ++D L +
Sbjct: 121 ELTNIMKNTSFGGEKLLQGGKVASALSFQIGSAAEETMSVDLSGNMKSLDDSLGKVSANY 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + E+ ++ + A T + + +
Sbjct: 181 EKTMTADEKAAADKAKRDKQITAANGVLDATAKTAAEAAAKTAAGGKDQAAITAMASGTD 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+AK A A + + +
Sbjct: 241 AEKKAKADAQAQYDNGYLAEASKNADAKTAIDAAVANTEIGKSDTITTINAALDAVGTVR 300
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
++ N + N + D +S + + + +
Sbjct: 301 SALGANANRLDHVINNLSNVNNNTLAAKGRIMDTDYANESSNMTAKQMLMQASTSMLKQS 360
Query: 358 KLAMEEMVSFID 369
+S +
Sbjct: 361 GSMSSLAMSLLQ 372
Score = 74.0 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 64/203 (31%)
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
L A T + A I N + A T +
Sbjct: 170 DDSLGKVSANYEKTMTADEKAAADKAKRDKQITAANGVLDATAKTAAEAAAKTAAGGKDQ 229
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
A + D E + + + + N ++ + ++ I
Sbjct: 230 AAITAMASGTDAEKKAKADAQAQYDNGYLAEASKNADAKTAIDAAVANTEIGKSDTITTI 289
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
+ + +G+ ++R+ + + + + GR++D D A+ES+ ++A Q
Sbjct: 290 NAALDAVGTVRSALGANANRLDHVINNLSNVNNNTLAAKGRIMDTDYANESSNMTAKQML 349
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
Q + L + ++ +SL +
Sbjct: 350 MQASTSMLKQSGSMSSLAMSLLQ 372
>gi|306516581|gb|ADM96179.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 75/205 (36%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNAKANSDLNAKSLDSSLARLSSGLRINSAADDASGMAIADSLRSQANTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINKLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I S + + + S
Sbjct: 122 NIANTTSFNGKQLLSGGFTNQEFQIGSSSNQTVKATIGATQSSKIGVTRFETGSQSFTSG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
G +
Sbjct: 182 IVGLTIKNYNGIEDFKFDNVVISTS 206
>gi|115381354|gb|ABI96360.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Hadar]
gi|115381358|gb|ABI96362.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Hadar]
gi|115381360|gb|ABI96363.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Hadar]
gi|115381363|gb|ABI96364.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Hadar]
Length = 221
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 3/185 (1%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ A I Q +D + + ++ + Y +
Sbjct: 121 NTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVSATDVISSTYSDGTQALTAP 180
Query: 198 VEPQV 202
+
Sbjct: 181 TATDI 185
>gi|19338956|gb|AAL86894.1|AF479024_1 flagellin B subunit [Helicobacter pylori]
Length = 514
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 58/510 (11%), Positives = 142/510 (27%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA- 62
I TN +A+++ N +L +++SSGLR++ AAD+++ +IA ++S + L
Sbjct: 5 INTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 63 -------------------------------VSDAIGLGS---------SKVDIAKAGMS 82
A G S + +
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELD 124
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA---------RGSSFNGENW 133
+ S ++ +G + + T +++ + + SSF+GE
Sbjct: 125 NIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIGSTSSDKIGHVRMETSSFSGEGM 184
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL------------DPETVLLDSST 181
L + + + + +D + T+ + +S
Sbjct: 185 LASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASY 244
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G ++ ++ +I + + + Q
Sbjct: 245 NVMATGGTPVQSGTVRELTINGVEIGTVNDVRKNDADGRLTNAINSVKDRTGVEASLDIQ 304
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A + + G + + + + +G + ++
Sbjct: 305 GRINLHSIDGRAISVHAASASGQVFGGGNFAGISGTQHAVIGRLTLTRTDARDIIVSGVN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G Y V+ + ++ + +
Sbjct: 365 FSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ D+ +GS+ + + I + + V+ ++ D D A ES
Sbjct: 425 MIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESAN 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|89072290|ref|ZP_01158869.1| lateral flagellin LafA [Photobacterium sp. SKA34]
gi|89051822|gb|EAR57274.1| lateral flagellin LafA [Photobacterium sp. SKA34]
Length = 289
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 66/148 (44%), Gaps = 3/148 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN++++ L + + L +R+S+G RV+ AAD+AA IA + + +S
Sbjct: 3 LSMHTNYASLVTQNTLSNTSNLLNTAMERLSTGYRVNSAADDAAGLQIATRLDAQTRGMS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQ 118
G S + A+ + +++ + + T D ++ +E QL +
Sbjct: 63 VAMRNSQDGISMMQTAEGAFDEMTNIVYRMNDLATQASNGTVSANDRTALDAEFQQLGEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIA 146
L ++ +SF G++ L A++
Sbjct: 123 LANVMASTSFGGQDILTDAGSFGAAAVN 150
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 35/80 (43%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+K A +G+ +R+ + M + V GR+VDAD A ES+ ++ Q Q
Sbjct: 210 LKEIGDARSALGANINRLDHTITNLGNMVENVSAAKGRIVDADFAVESSSMTKNQMLMQA 269
Query: 432 AVQALSIVNNSTARILSLFR 451
LS N +SL R
Sbjct: 270 GTTVLSQTNQLPGMAMSLLR 289
>gi|320106355|ref|YP_004181945.1| flagellin domain-containing protein [Terriglobus saanensis SP1PR4]
gi|319924876|gb|ADV81951.1| flagellin domain protein [Terriglobus saanensis SP1PR4]
Length = 399
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 55/451 (12%), Positives = 122/451 (27%), Gaps = 59/451 (13%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+L N SA+ L +L ++SSG R++ AD+AA ++A + +++ AL+
Sbjct: 5 VLNNISALYTLNSLNTTQASLSKTLQQLSSGSRINSGADDAAGLAVADGLTANSTALAQS 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLR 120
+ + A +S+ +++ T + S E + +Q+
Sbjct: 65 TRNASDAIGLLQTADGALSQVTSLLTRAVTLATQASNSTLTTSQVSSANQEYQNILTQIA 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
DI ++FNG + S + D G + + ++
Sbjct: 125 DIGTSTNFNGNTIFNGSTKTFVVSDGTTAGTISYSDIVGALSQ-----SSIGTSDTTKTA 179
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ VS + + L +G L +
Sbjct: 180 LALSTPTASAAGTASTTKVSLATATDTVSGTLSVAVGTGTAVSLQVAAGTSLSDLATQIN 239
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
V T + + ++ + T + + T+
Sbjct: 240 ANADFTAAGVTASYDTTTKALTLSGPATAASTLDTTGTALTEDAPVAAGQVGAGVDFTTA 299
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T ++ + S R + +
Sbjct: 300 TLKTLTSASAQTILTTLGTAISGVALQRGSIGAD-------------------------- 333
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ + + + A + + + I D ++
Sbjct: 334 ----INQLSSAQQVAATEQTNLTAAQNNISAT---------------------DYGQAAS 368
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
LS Q Q + AL+ N+ +L L +
Sbjct: 369 DLSKYQVLSQTGISALAQANSVQQEVLKLLQ 399
>gi|307823538|ref|ZP_07653767.1| flagellar hook-associated protein 3 [Methylobacter tundripaludum
SV96]
gi|307735523|gb|EFO06371.1| flagellar hook-associated protein 3 [Methylobacter tundripaludum
SV96]
Length = 427
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 61/437 (13%), Positives = 130/437 (29%), Gaps = 26/437 (5%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + + L +Q ++S+G++VS AD+ + +
Sbjct: 3 ISTAWAQQLSVTAMSNQQSKLANLQQQLSTGVKVSVPADDPGAAARILDLDKTIDKTKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ I +++I ++ ++ + ++ ++ + D I++E+ QL QL
Sbjct: 63 QNNIATTRGRLNIEESALATSGGILDRARDLTIQAMNDTLNSNDRLGIKTEVDQLIQQLA 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + NGE DL + A + G+++ + + I L
Sbjct: 123 GVANTQNANGEFIFSGDLSNVPAFTKNATTGNYVYQGGPEQRALQIGPTRQVADGDLG-- 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
++ + + I + S +S+
Sbjct: 181 ----VNVFENVKSSSPAADENGNRSIFNILKALSDGLSSTFNATPAEITGDRFLRYGLDY 236
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A V A + T T V T + G ++A + +
Sbjct: 237 TAATTKFDLVANGPVTAPIDLTGKTFAGVDSLVTEINTQLGAGGFSGAIQARSNGNRVEF 296
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
V + S + N T A +
Sbjct: 297 -----------------VSVATGAASSIQINNTSGTFLTDAGFTNGQNKTGTAAQALQGQ 339
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ +++S +D A +G + + QE + + + + D D A +
Sbjct: 340 LTDVLSDLDAAKNSVLEARTSVGGRLNALSDQETQNEKFILDTKTTLSQTQDLDYADAYS 399
Query: 421 RLSALQTQQQLAVQALS 437
+ T Q A QA S
Sbjct: 400 KFQMQTTALQAAQQAFS 416
>gi|306516637|gb|ADM96207.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 77/205 (37%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNAKANSDLNAKSLDSSLARLSSGLRINSAADDASGMAIADSLRSQANTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I S + + + + S
Sbjct: 122 NIANTTSFNGKQLLSGGFTNQEFQIGSSSNQTVKATIGATQSSKIGVTRFETGSQSVTSG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
G + +
Sbjct: 182 VVGLTIKNYNGIEDFKFQDVVISTS 206
>gi|315586104|gb|ADU40485.1| flagellin B [Helicobacter pylori 35A]
Length = 514
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 59/510 (11%), Positives = 142/510 (27%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA- 62
I TN +A+++ N +L +++SSGLR++ AAD+++ +IA ++S + L
Sbjct: 5 INTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 63 -------------------------------VSDAIGLGS---------SKVDIAKAGMS 82
A G S + +
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRKALQSDIQRLLEELD 124
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA---------RGSSFNGENW 133
+ S ++ +G + + T +++ + + SSF+ E
Sbjct: 125 NIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIGSTSSDKIGHVRMETSSFSAEGM 184
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL------------DPETVLLDSST 181
L + + + + +D + T+ + +S
Sbjct: 185 LASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASY 244
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G ++ +K +I + + + Q
Sbjct: 245 NVMATGGTPVQSGTVKDLTINGVEIGTVNDVHKNDADGRLINAINSVKDRTGVEASLDIQ 304
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A + + G + + + + +G + ++
Sbjct: 305 GRINLHSIDGRAISVHATSASGQVFGGGNFAGISGTQHAVIGRLTLTRTDARDIIVSGVN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G Y V+ + ++ + + I
Sbjct: 365 FSHVGLHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAEINSQGIGAGVTSLKGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ D+ +GS+ + + I + + V+ ++ D D A ES
Sbjct: 425 MIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESAN 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|306516629|gb|ADM96203.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 78/206 (37%), Gaps = 3/206 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 1 VINTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQ 60
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 61 AISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEEL 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+IA +SFNG+ L + + I S + + + S
Sbjct: 121 DNIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSS 180
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 181 GEVQFTLKNYNGIDDFQFQKVVISTS 206
>gi|115381336|gb|ABI96351.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Panama]
gi|115381340|gb|ABI96353.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Panama]
Length = 220
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 65/186 (34%), Gaps = 3/186 (1%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ A I Q +D + + + T Y +
Sbjct: 121 NTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKDTAVTTTAYADNGTTLDVS 180
Query: 198 VEPQVL 203
Sbjct: 181 GLTDAA 186
>gi|13446363|gb|AAK20919.1| lateral flagellin [Aeromonas hydrophila]
Length = 279
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 37/274 (13%), Positives = 90/274 (32%), Gaps = 4/274 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN ++M+ +L N L R+ +GLR++ AAD+AA IA +++ +
Sbjct: 3 LSIHTNFASMTTQNQLNSTNKMLGTAMQRLGTGLRINSAADDAAGLQIATRLQAQSNGQK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A++ M + ++ +K+ T D ++ +E +L +
Sbjct: 63 VGMRNAQDAISMIQTAESAMDEMTNITQRMKDLATQAANGTNSTKDLDAMDAEFKELGKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L +I ++F G + L+ G A+ + D+ +T ++
Sbjct: 123 LGNIRDNTTFGGTSLLK-TGGKFQATGGVTFQIGASVDEKLVFDASTKVTSVNTAISTAS 181
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ T + + + + + + + +
Sbjct: 182 AAALTTGAAAQITAMDSMLEKIGEARSAFGANINRLEHTVNNLSNMKENTDMANGRIMDA 241
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ + ++ + +
Sbjct: 242 DFAQESTNMTKNQMLMQAGMSVLSNSNQMTGMVT 275
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 42/87 (48%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ +D+ ++ A G+ +R+ + + M++ + GR++DAD A EST ++
Sbjct: 193 ITAMDSMLEKIGEARSAFGANINRLEHTVNNLSNMKENTDMANGRIMDADFAQESTNMTK 252
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q Q + LS N T + L R
Sbjct: 253 NQMLMQAGMSVLSNSNQMTGMVTGLLR 279
>gi|149908750|ref|ZP_01897411.1| lateral flagellin LafA [Moritella sp. PE36]
gi|149808292|gb|EDM68231.1| lateral flagellin LafA [Moritella sp. PE36]
Length = 374
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN+++++ +L N L R+ +GLR++ A+D+AA IA +++ +
Sbjct: 3 LSVHTNYASLATQNQLGKTNSMLSTAMQRLGTGLRINSASDDAAGLQIATRLQTQSNGQK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A+ +S+ + +K+ T + ++ E +L ++
Sbjct: 63 VGMRNAQDSISMMQTAEGALSEMTSIGQRMKDIATQASNGTNGTAEYTALNDEYKELAAE 122
Query: 119 LRDIARGSSFNG 130
L +I + + +
Sbjct: 123 LTNITQNTQYGE 134
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 44/98 (44%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+++ + + + DT I + G+ G+ +R+ + + M +E GR++DA
Sbjct: 277 NVSDQASAQAAMKSTDTLIDTIGSLRGQFGASINRLDHTINNLGNMNQNIELSKGRIMDA 336
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D A+ES ++ Q Q + L N ++ L R
Sbjct: 337 DFAAESASMTKQQLLMQSGMSVLGKSNQIGGMVMGLLR 374
>gi|229069310|ref|ZP_04202600.1| Flagellin [Bacillus cereus F65185]
gi|228713797|gb|EEL65682.1| Flagellin [Bacillus cereus F65185]
Length = 269
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + ++ VV + +++G +++ A+DN A +I M + +
Sbjct: 6 IGTNVLSMNARQSLYENEKHMNVVMEHLATGKKLNHASDNPANVAIVTRMHARASGMRVA 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKS---IQSEITQLQSQLR 120
S + A+A + +++ +++ +K+ + E L Q+
Sbjct: 66 IRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSSNGTNSNKNCHSLNKEFQSLTEQIG 125
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T I Q
Sbjct: 126 YIGETTEFNDLSVFDGQNRPITLDDIGHTINMTKHIPPSPTQHDIKIST 174
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 30/266 (11%), Positives = 81/266 (30%), Gaps = 1/266 (0%)
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+ N Q L + + + ++T K + A
Sbjct: 3 IMRIGTNVLSMNARQSLYENEKHMNVVMEHLATGKKLNHASDNPANVAIVTRMHARASGM 62
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
+ + + T+ + ++ + + +S+ +S+ +
Sbjct: 63 RVAIRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSSNGTNSNKNCHSLNKEFQSLTE 122
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD-AYNEKLAMEEMV 365
+ +G T + D +R +I +M D + + +
Sbjct: 123 QIGYIGETTEFNDLSVFDGQNRPITLDDIGHTINMTKHIPPSPTQHDIKISTEQEARTAI 182
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
I+ ++ + +G++ +R+ + + A+ + DADMA E +
Sbjct: 183 RKIEEALQSVSLHRADLGAMINRLQFNIENLNNQSMALTDAASLIEDADMAQEMSDFLKF 242
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
+ ++A+ +S N + L +
Sbjct: 243 KLLTEVALSMVSQANQIPQMVSKLLQ 268
>gi|258404761|ref|YP_003197503.1| flagellin domain-containing protein [Desulfohalobium retbaense DSM
5692]
gi|257796988|gb|ACV67925.1| flagellin domain protein [Desulfohalobium retbaense DSM 5692]
Length = 281
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 74/202 (36%), Gaps = 3/202 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN +++ + L + LE Q R+++GLR++ AAD+AA +I M S ++
Sbjct: 3 LSINTNMASLQSQMSLANSTQALEQNQQRLATGLRINSAADDAAGLTITDGMTSQIRGMN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ G + +++ ++ D K++Q E +L ++
Sbjct: 63 QAVRNANDGISMAQTAEGGAKEITNMLQRMRELAVQAANDTNTDADKKALQQEFNELTAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ + + FN EN L G+S S + Q L
Sbjct: 123 ITRVGNSTQFNKENLLTGSAGASVNIQVGPNNTSDDTINIDLSQDLRAATGALGVNGLNI 182
Query: 179 SSTDGTERYGLLDRNHKIKVEP 200
S + + +
Sbjct: 183 GSGSSLTQIQTAISDIDDAIGT 204
Score = 77.1 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 38/85 (44%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ ++ +S ID I ++G+ +R+ ++ + + R++DAD+
Sbjct: 186 SSLTQIQTAISDIDDAIGTVDEFRSELGATQNRLQSSISNLENAAQNLTESRSRIMDADI 245
Query: 416 ASESTRLSALQTQQQLAVQALSIVN 440
A ES ++ +QQ + L+ N
Sbjct: 246 AKESAEMTQNNVRQQASAAVLAQAN 270
>gi|303326943|ref|ZP_07357385.1| flagellin FliC [Desulfovibrio sp. 3_1_syn3]
gi|302862931|gb|EFL85863.1| flagellin FliC [Desulfovibrio sp. 3_1_syn3]
Length = 302
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 3/174 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N A + ++ L L +R+S+GLRV+ AAD+AA +I ++ ++D L
Sbjct: 3 LVINHNMMAANTARNLNAHYSQLSKSTERLSTGLRVNSAADDAAGLAIRELQRADIATLH 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ S + + + ++ +K T I+SE + S+
Sbjct: 63 QGARNANDAISLIQTGDGALGVIDEKLTRMKELAEQAATGTYDSTQRLMIESEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
+ IA + FNG L L SS+ + ++ G + DYY
Sbjct: 123 ITRIANATDFNGIKLLDGTLSSSSHDGSGMTATGKLKVHFGTGNDSAEDYYYIT 176
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 65/241 (26%)
Query: 212 DASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
+ L T L + + K +A + +
Sbjct: 62 HQGARNANDAISLIQTGDGALGVIDEKLTRMKELAEQAATGTYDSTQRLMIESEYQAMAS 121
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
+ A + + +S + T + +
Sbjct: 122 EITRIANATDFNGIKLLDGTLSSSSHDGSGMTATGKLKVHFGTGNDSAEDYYYITIGSCT 181
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ G + + + + A +E + + I +G++ +R+
Sbjct: 182 ASALGVGNQAIDAATGQLRAGGTISTQEAAQETLVALTDAIVSKDKIRAHLGAMQNRLEN 241
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + ++ R+ D D+A+E T+ Q Q AV LS N+ + L
Sbjct: 242 TITNLNTQAENLQAAESRISDVDVATEMTQFVRTQILSQSAVAMLSQANSLPQMAMQLIG 301
Query: 452 G 452
G
Sbjct: 302 G 302
>gi|306516603|gb|ADM96190.1| FlaA [Campylobacter coli]
Length = 206
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 44/205 (21%), Positives = 76/205 (37%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNAKANSDLNSRALDQSLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I S + + + S
Sbjct: 122 NIANTTSFNGKQLLSGGFTNQEFQIGSSSNQTIKASIGATQSSKIGVTRFETGSQSFSSG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
T G +
Sbjct: 182 TVGLTIKNYNGIEDFKFQNVVISTS 206
>gi|260779329|ref|ZP_05888221.1| flagellin protein flaA [Vibrio coralliilyticus ATCC BAA-450]
gi|260605493|gb|EEX31788.1| flagellin protein flaA [Vibrio coralliilyticus ATCC BAA-450]
Length = 277
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN++++ L N L +R+S+G+R++ AAD+AA SIA +++ +S
Sbjct: 3 LSMHTNYASLVTQNTLSSTNDLLSTAMERLSTGMRINSAADDAAGLSIANKLEAQTRGMS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQ 118
S + A + + ++ +K+ T + ++ +E +L ++
Sbjct: 63 VAMRNSQDAISMLQTADGALEELTNIAYRMKDLATQSANDTNGASERAALTAEYGELAAE 122
Query: 119 LRDIARGSSF 128
I +S+
Sbjct: 123 ATRILTETSY 132
Score = 93.3 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 35/96 (36%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + +D +G+ +R+ + + + + GR+ DAD
Sbjct: 182 TNQANSTTAIGTVDGLFDTINTVRSSLGANINRLEHTINNLANVSENTAAAKGRITDADF 241
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A ES+ ++ Q Q LS N +SL R
Sbjct: 242 AIESSNMTKNQMLMQAGTTVLSQTNQLPGMAMSLLR 277
>gi|190890372|ref|YP_001976914.1| flagellin C protein [Rhizobium etli CIAT 652]
gi|190695651|gb|ACE89736.1| flagellin C protein [Rhizobium etli CIAT 652]
Length = 301
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 85/226 (37%), Positives = 116/226 (51%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN SAM+A Q LR++N L Q+ VSSG RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNSSAMAALQTLRNVNQGLNNTQNHVSSGYRVEKASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+G+G++KVD A M AIDV+ IK K+ A E G D +Q EI QLQ QL+
Sbjct: 61 SAVSDALGMGAAKVDTAYTAMDSAIDVVGDIKAKLVAATENGVDKAKVQEEIGQLQEQLK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ +SFNGENW+ G+ + + GS + + + + +
Sbjct: 121 SIAQSASFNGENWVAGASGTKSVVSSFVRDGSNAVSVTTTDYVLDSGSAGNVLFGMSNGA 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + + + + + T K T
Sbjct: 181 VETSTGILGTSNGATGSIYAMDITNFTAGQIQTALTNVEAALKSMT 226
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 49/105 (46%), Positives = 72/105 (68%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ +A ++ ++ ++ +K T+A +GS+S RI QEDF+ + D+++ G
Sbjct: 197 SIYAMDITNFTAGQIQTALTNVEAALKSMTSAGAALGSLSKRIDNQEDFVSALSDSIDSG 256
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
VGRLVDADM ES++LSALQTQQQLA+Q+LSI N+S+ ILSLFR
Sbjct: 257 VGRLVDADMEEESSKLSALQTQQQLAIQSLSIANSSSQNILSLFR 301
>gi|153831747|ref|ZP_01984414.1| flagellin [Vibrio harveyi HY01]
gi|148872257|gb|EDL71074.1| flagellin [Vibrio harveyi HY01]
Length = 289
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 73/205 (35%), Gaps = 3/205 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN +++ L + + L +R+S+G R++ AAD+AA IA ++S +S
Sbjct: 3 LSMHTNFASLVTQNTLNNTSNLLNTSMERLSTGYRINSAADDAAGLQIATRLESQTRGMS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G S + A+ M + +++ + + T D ++ +E QL +
Sbjct: 63 VAMRNSQDGISMMQTAEGAMDEMTNIVYRMNDLATQASNGSVSANDRTALNAEYQQLGEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L +I +SF G L+ A++ + V T
Sbjct: 123 LANIMDSTSFGGNKLLQDAGTFGAAAVNFQIGTQAGEQLAVDVSAEVQAINASIGTSGAL 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVL 203
+ D T +
Sbjct: 183 AVGDLTSEANAQTAMTALTGATGDA 207
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 32/80 (40%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ A +G+ +R+ + M + GR+ DAD A ES+ ++ Q Q
Sbjct: 210 LGQIGTARSALGANINRLEHTMTNLGNMVENTSAAKGRITDADFAVESSNMTKNQMLMQA 269
Query: 432 AVQALSIVNNSTARILSLFR 451
LS N +SL R
Sbjct: 270 GTTVLSQTNQLPGMAMSLLR 289
>gi|14248767|gb|AAK57645.1|AF348135_3 LafA2 [Aeromonas caviae]
Length = 286
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN ++++ +L + N L R+ +GLR++ AAD+AA +A +++ +
Sbjct: 3 LSIHTNFASLTTQNQLNNTNKMLGTAMQRLGTGLRINSAADDAAGLQMATRLQAQSNGQK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQ 118
S + A+ + + +++ +K+ T G T +++ ++ +L ++
Sbjct: 63 VGMRNAQDAISMMQTAEGALDEMTNIVQRMKDLATQGANGTTSAENYPALSADFGELSTE 122
Query: 119 LRDIARGSSFNGENWLRTDL 138
L +I +SF G+ L+
Sbjct: 123 LGNIVNNTSFGGQTLLKGGS 142
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 37/286 (12%), Positives = 74/286 (25%)
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+ + L + +L + + +
Sbjct: 1 MGLSIHTNFASLTTQNQLNNTNKMLGTAMQRLGTGLRINSAADDAAGLQMATRLQAQSNG 60
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
G + Q A + T G +G+ S + + S
Sbjct: 61 QKVGMRNAQDAISMMQTAEGALDEMTNIVQRMKDLATQGANGTTSAENYPALSADFGELS 120
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
S + + + ST D + T
Sbjct: 121 TELGNIVNNTSFGGQTLLKGGSFEVPTGVTFQIGGSSTETLKVDVPTAMKDLTGTTATSG 180
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
++ + ++ + A G+ +R+ + + M++ +
Sbjct: 181 TADADIVAGIGDQTKASDAITATSNLLDQIGAVRSSFGANINRLEHTVNNLSNMKENTDM 240
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
GR++DAD A EST ++ Q Q + LS N T + SL R
Sbjct: 241 ANGRIMDADFAQESTNMTKNQMLMQAGMSVLSNSNQMTGMVTSLLR 286
>gi|209547937|ref|YP_002279854.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533693|gb|ACI53628.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 302
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 79/146 (54%), Positives = 100/146 (68%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN++AM+A Q LR IN L+ Q VSSG RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNNAAMAALQTLRGINQGLQTTQAHVSSGYRVGQASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A + M AIDV+ IK K+ A E G D +Q EI+QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYSAMDSAIDVVGDIKAKLVAATENGVDKAKVQEEISQLQQQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
+A+ +SF+GENW+ G+ +
Sbjct: 121 SVAQSASFSGENWVAGADGTKNVVAS 146
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/106 (48%), Positives = 74/106 (69%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ +A ++ ++ ++ +K T+A +GSIS RI LQE+F+ + D+++ G
Sbjct: 197 SVYAMDITNFTLGEIQSALTNVEAALKSMTSAGAALGSISKRIELQENFVSALSDSIDSG 256
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
VGRLVDADM ES++LSALQTQQQLAVQ+LSI N+S+ IL+LFRG
Sbjct: 257 VGRLVDADMEEESSKLSALQTQQQLAVQSLSIANSSSQTILTLFRG 302
>gi|156976190|ref|YP_001447096.1| hypothetical protein VIBHAR_04961 [Vibrio harveyi ATCC BAA-1116]
gi|156527784|gb|ABU72869.1| hypothetical protein VIBHAR_04961 [Vibrio harveyi ATCC BAA-1116]
Length = 289
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 72/205 (35%), Gaps = 3/205 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN +++ L + + L +R+S+G R++ AAD+AA IA ++S +S
Sbjct: 3 LSMHTNFASLVTQNTLNNTSNLLNTSMERLSTGYRINSAADDAAGLQIATRLESQTRGMS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G S + A+ M + +++ + + T D ++ +E QL +
Sbjct: 63 VAMRNSQDGISMMQTAEGAMDEMTNIVYRMNDLATQASNGSVSANDRTALDAEYQQLGEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L +I +SF G L+ ++ + V T
Sbjct: 123 LANIMDSTSFGGNKLLQDTGAFGAGAVDFQIGTQAGEKLAVNVSTEVQAINASIGTSGSL 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVL 203
+ D T +
Sbjct: 183 AVGDLTSAANAQTAMTALTGATGDA 207
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 33/80 (41%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ A +G+ +R+ + M + GR+ DAD A ES+ ++ Q Q
Sbjct: 210 LGQIGTARSALGANINRLEHTMTNLGNMVENTSAAKGRITDADFAVESSNMTKNQMLMQA 269
Query: 432 AVQALSIVNNSTARILSLFR 451
LS N + +SL R
Sbjct: 270 GTTVLSQTNQLPSMAMSLLR 289
>gi|87242396|gb|ABD33737.1| flagellin [Bacillus thuringiensis serovar colmeri]
Length = 326
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGISLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++ E L+ Q+ I+ + FN + L
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTNENQAALNKEFDALKEQIDYISTNTEFNDKKLLDGSN 120
Query: 139 GSSTASI 145
+
Sbjct: 121 KTIAVQT 127
Score = 67.5 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 33/70 (47%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ IDT +K + +G+ +R+ + +K ++ ++ DADMA E + ++
Sbjct: 257 AIASIDTALKNIASNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMT 316
Query: 424 ALQTQQQLAV 433
+ + +
Sbjct: 317 KFKILNEAGI 326
>gi|283853182|ref|ZP_06370435.1| flagellin domain protein [Desulfovibrio sp. FW1012B]
gi|283571440|gb|EFC19447.1| flagellin domain protein [Desulfovibrio sp. FW1012B]
Length = 297
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 3/181 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N A +AS+ L + L +R+SSGLR++ AAD+AA +I ++M+SD A +
Sbjct: 3 LVINHNMMAATASRNLSNSYSALATSTNRLSSGLRITTAADDAAGLAIRELMRSDIAATN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A + + + +K I SE + S+
Sbjct: 63 QGVRNANDAISMIQTADGALQVVDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG L +L +T S A ++ G + DYY
Sbjct: 123 ITRIANATDFNGIYLLNGNLSGATHSGAGLNATGKMKVHFGASNNSAEDYYYVQIGTSTA 182
Query: 179 S 179
S
Sbjct: 183 S 183
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 53/140 (37%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + ++ D + V + A + + + ++ + I + I
Sbjct: 158 MKVHFGASNNSAEDYYYVQIGTSTASALGVGIGAASSAAGRSISTQELAQKALDAITSAI 217
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+G++ +R+ +++ + ++ ++ D D+A+E T+ Q Q A
Sbjct: 218 VSKDKIRANLGALQNRLENTISNLQIQSENLQAAESQISDVDVATEMTQFVRNQILTQSA 277
Query: 433 VQALSIVNNSTARILSLFRG 452
V LS N+ + L G
Sbjct: 278 VAMLSQANSLPKMAMQLIGG 297
>gi|225863617|ref|YP_002748995.1| flagellin [Bacillus cereus 03BB102]
gi|225788858|gb|ACO29075.1| flagellin protein [Bacillus cereus 03BB102]
Length = 266
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 59/169 (34%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A+DN A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNHASDNPANVAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + ++++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVMNILQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T + + Q
Sbjct: 123 YIGETTEFNDLSVFDGQNRPVTLDDIGHTVNITKHIPSSPTQHDINIST 171
Score = 91.0 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/239 (11%), Positives = 68/239 (28%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T +
Sbjct: 27 MEHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVMNI 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + T T + + + L
Sbjct: 87 LQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + I+ ++ + +G++ +R+
Sbjct: 147 DIGHTVNITKHIPSSPTQHDINISTEQEARAAIRKIEEALQNVSLHRADLGTMMNRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N I L +
Sbjct: 207 IENLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMISKLLQ 265
>gi|118444228|ref|YP_877971.1| flagellin [Clostridium novyi NT]
gi|118134684|gb|ABK61728.1| flagellin [Clostridium novyi NT]
Length = 277
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N ++++ ++ + + + +R+SSG +++ A ++ ++++ M+ L
Sbjct: 3 LNHNMASLTICREQEKVWSSQSMYMNRISSGFKINSAKEDPNGLALSEKMRVQIRGLQIA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG--VERGTDSKSIQSEITQLQSQLRD 121
G S + A + ++ I+ D ++++ EI Q+ + D
Sbjct: 63 QRNAQDGMSMLQSADGALEGVQSMLIRIRELSIQAGGATNENDRQALKGEINQMIDGIDD 122
Query: 122 IARGSSFNGENW 133
+ S FNG++
Sbjct: 123 TLKHSDFNGKSI 134
Score = 75.5 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 31/88 (35%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ D+ + + GK G++ +R + I + D + ++ D D+A L+
Sbjct: 188 LEITDSAVDKISDIRGKYGALCNRFEGTYNEIHEIHDTIVGTESKIRDTDIAESMMNLAR 247
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFRG 452
+ L N L + G
Sbjct: 248 DNILIEAGQAMLVQSNKFPQDALRVLEG 275
>gi|301053297|ref|YP_003791508.1| flagellin [Bacillus anthracis CI]
gi|300375466|gb|ADK04370.1| flagellin [Bacillus cereus biovar anthracis str. CI]
Length = 266
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 59/169 (34%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++A Q L + + V + +++G +++ A+DN A +I M + + V
Sbjct: 3 IGTNVLSINARQSLYENEKRMNVGMEHLATGKKLNHASDNPANLAIVTRMHARTSGMRVV 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
S + A+A + ++++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVMNILQRMRDLAVHSANDTNSNKNRDSLNKEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T + Q
Sbjct: 123 YIGETTEFNDLSVFDGQNRPVTLDDIGHTVNVTKHISPSPTQHDIKIST 171
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 27/239 (11%), Positives = 70/239 (29%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A L + G+ + A + T +
Sbjct: 27 MEHLATGKKLNHASDNPANLAIVTRMHARTSGMRVVIRNNEDAISMLRTAEAALQTVMNI 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ +D + T T + + + L
Sbjct: 87 LQRMRDLAVHSANDTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ ++ + + + + + I+ ++ + +G++ +R+
Sbjct: 147 DIGHTVNVTKHISPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGAMINRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 207 IENLNSQSTALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSKLLQ 265
>gi|225619912|ref|YP_002721169.1| flagellar protein [Brachyspira hyodysenteriae WA1]
gi|225214731|gb|ACN83465.1| flagellar protein [Brachyspira hyodysenteriae WA1]
Length = 262
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 19/162 (11%), Positives = 49/162 (30%)
Query: 290 RATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRH 349
+ N +T + + ++ + +
Sbjct: 101 QFNKLNMLTGRFARSTGENTPTASMWLHIGANMDERKRVYIGTMNSQALGLKNPVGPAVT 160
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
A + + ++ +D + +G+ +R+ + + + + ++ R
Sbjct: 161 ATFISVSSPAKANSVIGMVDEALLKVLKQRSDLGAYQNRLEMTAQGLMVGFENMQASESR 220
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D DMA S +L+ Q Q + L+ N L L +
Sbjct: 221 IRDTDMAEASVKLAKDQILNQANLSMLAQANQLPQGALRLLQ 262
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 64/177 (36%), Gaps = 3/177 (1%)
Query: 31 VSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMST 90
+SSG+R++ A D+A+ ++++ M++ L G S + + + + +++
Sbjct: 2 ISSGMRINQAGDDASGLAVSEKMRTQIRGLRMAERNTQDGISFIQTTEGYLEETTNILQR 61
Query: 91 IKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
I+ D +Q E++QL ++ +A + FN N L ST
Sbjct: 62 IRELAIQAANGIYTDEDRLYVQIEVSQLVDEIDRVASQAQFNKLNMLTGRFARSTGENTP 121
Query: 148 SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ N + ++ + + L + + + K +
Sbjct: 122 TASMWLHIGANMDERKRVYIGTMNSQALGLKNPVGPAVTATFISVSSPAKANSVIGM 178
>gi|208434076|ref|YP_002265742.1| flagellin B [Helicobacter pylori G27]
gi|254778835|ref|YP_003056940.1| flagellin B [Helicobacter pylori B38]
gi|208432005|gb|ACI26876.1| flagellin B [Helicobacter pylori G27]
gi|254000746|emb|CAX28668.1| Flagellin B (Flagellin N) [Helicobacter pylori B38]
gi|317013538|gb|ADU80974.1| flagellin B [Helicobacter pylori Gambia94/24]
Length = 514
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 57/510 (11%), Positives = 141/510 (27%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA- 62
I TN +A+++ N +L +++SSGLR++ AAD+++ +IA ++S + L
Sbjct: 5 INTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 63 -------------------------------VSDAIGLGS---------SKVDIAKAGMS 82
A G S + +
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELD 124
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA---------RGSSFNGENW 133
+ S ++ +G + + T +++ + + SSF+G
Sbjct: 125 NIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIGSTSSDKIGHVRMETSSFSGAGM 184
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL------------DPETVLLDSST 181
L + + + + +D + T+ + +S
Sbjct: 185 LASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASY 244
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G ++ ++ +I + + + Q
Sbjct: 245 NVMATGGTPVQSGTVRELTINGVEIGTVNDVHKNDADGRLTNAINSVKDRTGVEASLDIQ 304
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A + + G + + + + +G + ++
Sbjct: 305 GRINLHSIDGRAISVHAASASGQVFGGGNFAGISGTQHAVIGRLTLTRTDARDIIVSGVN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G Y V+ + ++ + +
Sbjct: 365 FSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ D+ +GS+ + + I + + V+ ++ D D A ES
Sbjct: 425 MIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESAN 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|327193046|gb|EGE59958.1| flagellin C protein [Rhizobium etli CNPAF512]
Length = 302
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 85/226 (37%), Positives = 117/226 (51%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN SAM+A Q LR++N L Q+ VSSG RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNSSAMAALQTLRNVNQGLNSTQNHVSSGYRVEKASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+G+G++KVD A M AIDV+ IK K+ A E G D +Q EI QLQ QL+
Sbjct: 61 SAVSDALGMGAAKVDTAYTAMDSAIDVVGDIKAKLVAATENGVDKAKVQEEIGQLQEQLK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ +SFNGENW+ G+ + + GS + + + + +
Sbjct: 121 SIAQSASFNGENWVAGANGTKSVVSSFVRDGSNAVSVTTTDYVLDSGSAGNVLFGMSNGA 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + + + + ++ T K T
Sbjct: 181 VETSTGILGTSNGATGSIYAMDITNFTAGQIQSALTNVEAALKSMT 226
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/106 (46%), Positives = 73/106 (68%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ +A ++ ++ ++ +K T+A +GS+S RI QEDF+ + D+++ G
Sbjct: 197 SIYAMDITNFTAGQIQSALTNVEAALKSMTSAGAALGSLSKRIDNQEDFVSALSDSIDSG 256
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+GRLVDADM ES++LSALQTQQQLA+Q+LSI N+S+ ILSLFRG
Sbjct: 257 IGRLVDADMEEESSKLSALQTQQQLAIQSLSIANSSSQTILSLFRG 302
>gi|229102359|ref|ZP_04233067.1| Flagellin [Bacillus cereus Rock3-28]
gi|228681006|gb|EEL35175.1| Flagellin [Bacillus cereus Rock3-28]
Length = 339
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + M+ ++
Sbjct: 1 MDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGISLIRTADSAMNSVSNI 60
Query: 88 MSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ +++ + ++ E L+ Q+ I+ + FN + L
Sbjct: 61 LLRMRDLANQSANGTNTNENQAALNKEFDALKEQIDYISTNTEFNDKKLLDGSNTEIAIQ 120
Query: 145 I 145
Sbjct: 121 T 121
Score = 96.3 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 40/88 (45%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ IDT +K + +G+ +R+ + +K ++ ++ DADMA E + ++
Sbjct: 252 AIASIDTALKNIASNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMT 311
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + LS N + + L +
Sbjct: 312 KFKILNEAGISMLSQANQTPQMVSKLLQ 339
>gi|218512283|ref|ZP_03509123.1| flagellin C protein [Rhizobium etli 8C-3]
Length = 177
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 81/146 (55%), Positives = 100/146 (68%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN++AM+A Q LR IN L+ Q VSSG RV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNNAAMAALQTLRGINQGLQTTQAHVSSGYRVGKAADNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A + M AIDV+ IK K+ A E G D +Q EI+QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYSAMDSAIDVVGDIKAKLVAATENGVDKAKVQEEISQLQQQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA+ +SF+GENW+ G+ +
Sbjct: 121 SIAQSASFSGENWVAGADGTKNVVAS 146
>gi|295401160|ref|ZP_06811133.1| flagellin domain protein [Geobacillus thermoglucosidasius C56-YS93]
gi|294976753|gb|EFG52358.1| flagellin domain protein [Geobacillus thermoglucosidasius C56-YS93]
Length = 269
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 33/223 (14%), Positives = 71/223 (31%), Gaps = 5/223 (2%)
Query: 8 HSAMSASQKL--RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
+ +M A + NL +++SSGL++ A+D+AA SI++ +++ L+
Sbjct: 5 NQSMIAFSTYRYQRNVTNLTKTLEKLSSGLKIYRASDDAAGLSISETLRAQIRGLAQSQR 64
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDI 122
+ G S + A+ G+ ++ I+ D + Q E+ QL + D
Sbjct: 65 NMQDGLSVLKAAEEGLMNVNHLLQRIRELAVQNANDTLDAKDRAASQKELDQLLQAIDDT 124
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A FN + L ++ + A + + ++ +
Sbjct: 125 AEKLEFNTKKILGENIPLTLQVGANPGQTITVDMVDTSTTSLGLNGATLLTRTDAEQLIT 184
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+ N V + +
Sbjct: 185 KVDNALKKVTNDLTNVGADYEAIEHHLNNTMLKEANLTTSESM 227
Score = 54.7 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 38/94 (40%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ E++++ +D +K T +G+ I + L + L DA++A
Sbjct: 175 TRTDAEQLITKVDNALKKVTNDLTNVGADYEAIEHHLNNTMLKEANLTTSESMLRDANIA 234
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
E + + +QQ +S +N + L LF
Sbjct: 235 REMMNYISGKIRQQGDYLLISHINRNVEETLKLF 268
>gi|332528374|ref|ZP_08404372.1| flagellin domain-containing protein [Hylemonella gracilis ATCC
19624]
gi|332042174|gb|EGI78502.1| flagellin domain-containing protein [Hylemonella gracilis ATCC
19624]
Length = 83
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 39/83 (46%)
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D+ + + K+G++ SR + + + + + R+VDAD ASE+ LS Q
Sbjct: 1 DSALAFISGERAKLGALQSRFESTINNLNITAENLTASRSRIVDADFASETAALSRAQIL 60
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ ++ N +L+L R
Sbjct: 61 QQAGTAMIAQANQLPQGVLALLR 83
>gi|30019803|ref|NP_831434.1| flagellin [Bacillus cereus ATCC 14579]
gi|296502359|ref|YP_003664059.1| flagellin [Bacillus thuringiensis BMB171]
gi|29895348|gb|AAP08635.1| Flagellin [Bacillus cereus ATCC 14579]
gi|296323411|gb|ADH06339.1| flagellin [Bacillus thuringiensis BMB171]
Length = 272
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 44/256 (17%), Positives = 88/256 (34%), Gaps = 3/256 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 3 INTNINSMRTQEYMRQNQDKMNTAMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D+ S+ E L+S++
Sbjct: 63 ARNTQDAMSALRTGDAALGSISNILLRMRDLATQASNGTNNTEDTASLNKEYEALKSEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SFNG +L TD G + + S + TI ++
Sbjct: 123 HIADKTSFNGIKFLSTDKGGAADIKVQLSDASGDTMTIDSLNAKTITTDTLTTLADRATA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + + T A + A +
Sbjct: 183 ETEITKLDTAIQKIADERATFGSQLNRLDHNLNNVTSQATNMASAASQIEDADMAKEMSE 242
Query: 241 QAKGIATIPVPLPAAP 256
K +
Sbjct: 243 MTKFKILNEAGISMLS 258
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 23/210 (10%), Positives = 57/210 (27%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A+ L AA + S ++ + + +
Sbjct: 63 ARNTQDAMSALRTGDAALGSISNILLRMRDLATQASNGTNNTEDTASLNKEYEALKSEID 122
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ T + + + + ++
Sbjct: 123 HIADKTSFNGIKFLSTDKGGAADIKVQLSDASGDTMTIDSLNAKTITTDTLTTLADRATA 182
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
E ++ +DT I+ GS +R+ + + + ++ DADMA E +
Sbjct: 183 ETEITKLDTAIQKIADERATFGSQLNRLDHNLNNVTSQATNMASAASQIEDADMAKEMSE 242
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + + + LS N + + L +
Sbjct: 243 MTKFKILNEAGISMLSQANQTPQMVSKLLQ 272
>gi|306516565|gb|ADM96171.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 78/205 (38%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 122 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 182 EVQFTLKNYNGIDDFQFQKVVISTS 206
>gi|87242486|gb|ABD33782.1| flagellin [Bacillus mycoides]
Length = 283
Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats.
Identities = 41/235 (17%), Positives = 83/235 (35%), Gaps = 3/235 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ V +R+SSG R++ AAD+AA +IA M++ L S G S + A + M
Sbjct: 1 DKMNVSMNRLSSGKRINSAADDAAGLAIATRMRAKENGLGVASRNTQDGISMIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + +++ E + L+ Q+ I+ + FNG+ L D
Sbjct: 61 NSVSNILLRMRDLAVQSANGTNTNENRGALEKEFSALRDQIDYISTNTQFNGKTLLNGDN 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
GS + V D + + +GT L +
Sbjct: 121 GSIKIHSYDDGQATAATGSAAPVVDPVTDPGTGTDPGTTKPAINGTIDIKLANVTSANLE 180
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
+ + +GT T+ A + + A + + +
Sbjct: 181 GNEKKLNQISISATNAGTAGTEDDTTAINNANYAFKAIDGMIASIAGSRADLGAT 235
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/182 (10%), Positives = 50/182 (27%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + S+ + + A + +T T+ K
Sbjct: 102 DYISTNTQFNGKTLLNGDNGSIKIHSYDDGQATAATGSAAPVVDPVTDPGTGTDPGTTKP 161
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ + + ++ + S+ N D ID
Sbjct: 162 AINGTIDIKLANVTSANLEGNEKKLNQISISATNAGTAGTEDDTTAINNANYAFKAIDGM 221
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I + +G+ +R+ + + + ++ DADMA E + ++ + +
Sbjct: 222 IASIAGSRADLGATLNRLDFNVESLNNQASNMASSASQIEDADMAKEMSEMTKFKILNEA 281
Query: 432 AV 433
+
Sbjct: 282 GI 283
>gi|30261766|ref|NP_844143.1| flagellin [Bacillus anthracis str. Ames]
gi|47526996|ref|YP_018345.1| flagellin [Bacillus anthracis str. 'Ames Ancestor']
gi|49184597|ref|YP_027849.1| flagellin [Bacillus anthracis str. Sterne]
gi|165869281|ref|ZP_02213940.1| flagellin [Bacillus anthracis str. A0488]
gi|167633445|ref|ZP_02391770.1| flagellin [Bacillus anthracis str. A0442]
gi|167638805|ref|ZP_02397080.1| flagellin [Bacillus anthracis str. A0193]
gi|170686281|ref|ZP_02877503.1| flagellin [Bacillus anthracis str. A0465]
gi|170706552|ref|ZP_02897012.1| flagellin [Bacillus anthracis str. A0389]
gi|177650427|ref|ZP_02933394.1| flagellin [Bacillus anthracis str. A0174]
gi|190566516|ref|ZP_03019434.1| flagellin [Bacillus anthracis Tsiankovskii-I]
gi|227815468|ref|YP_002815477.1| flagellin [Bacillus anthracis str. CDC 684]
gi|229601291|ref|YP_002866155.1| flagellin [Bacillus anthracis str. A0248]
gi|254683261|ref|ZP_05147122.1| flagellin [Bacillus anthracis str. CNEVA-9066]
gi|254723846|ref|ZP_05185632.1| flagellin [Bacillus anthracis str. A1055]
gi|254734614|ref|ZP_05192326.1| flagellin [Bacillus anthracis str. Western North America USA6153]
gi|254741023|ref|ZP_05198711.1| flagellin [Bacillus anthracis str. Kruger B]
gi|254755266|ref|ZP_05207300.1| flagellin [Bacillus anthracis str. Vollum]
gi|254759802|ref|ZP_05211826.1| flagellin [Bacillus anthracis str. Australia 94]
gi|30255994|gb|AAP25629.1| flagellin protein [Bacillus anthracis str. Ames]
gi|47502144|gb|AAT30820.1| flagellin [Bacillus anthracis str. 'Ames Ancestor']
gi|49178524|gb|AAT53900.1| flagellin [Bacillus anthracis str. Sterne]
gi|164714721|gb|EDR20239.1| flagellin [Bacillus anthracis str. A0488]
gi|167513269|gb|EDR88640.1| flagellin [Bacillus anthracis str. A0193]
gi|167531483|gb|EDR94161.1| flagellin [Bacillus anthracis str. A0442]
gi|170128650|gb|EDS97517.1| flagellin [Bacillus anthracis str. A0389]
gi|170669978|gb|EDT20719.1| flagellin [Bacillus anthracis str. A0465]
gi|172083571|gb|EDT68631.1| flagellin [Bacillus anthracis str. A0174]
gi|190562651|gb|EDV16618.1| flagellin [Bacillus anthracis Tsiankovskii-I]
gi|227006801|gb|ACP16544.1| flagellin protein [Bacillus anthracis str. CDC 684]
gi|229265699|gb|ACQ47336.1| flagellin [Bacillus anthracis str. A0248]
Length = 287
Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats.
Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 3/174 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + V +R+SSG R++ AAD+AA +IA M++ L
Sbjct: 3 INTNINSMRTQEYMRQNQDKMNVSMNRLSSGKRINSAADDAAGLAIATRMRARQSGLEKA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S G S + A++ M+ ++++ +++ + ++Q E +LQ Q+
Sbjct: 63 SQNTQDGMSLIRTAESAMNSVSNILTRMRDIAVQSSNGTNTAENQSALQKEFAELQEQID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
IA+ + FN +N L + S + S I + I L T
Sbjct: 123 YIAKNTEFNDKNLLAGTGAVTIGSTSISGAEISIETLDSSATNQQITIKLANTT 176
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 33/83 (39%)
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
+T + +G+ +R+ + + + ++ DADMA E + ++ +
Sbjct: 205 NTALNTVAGNRATLGATLNRLDRNVENLNNQATNMASAASQIEDADMAKEMSEMTKFKIL 264
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
+ + LS N + + L +
Sbjct: 265 NEAGISMLSQANQTPQMVSKLLQ 287
>gi|332528375|ref|ZP_08404373.1| flagellin domain-containing protein [Hylemonella gracilis ATCC
19624]
gi|332042175|gb|EGI78503.1| flagellin domain-containing protein [Hylemonella gracilis ATCC
19624]
Length = 130
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN +++SA + + L R+SSGLR++ A D+AA +I+ S L+
Sbjct: 3 AVINTNINSLSAQRYQGLSDKALTTAIQRLSSGLRINSAKDDAAGLAISDRFTSQIRGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ G S + + A D++ ++ +D +++ E+ QL ++
Sbjct: 63 QAARNANDGVSLAQTTEGALGAASDILQRVRELAVQSANATNSASDRQALNQEVAQLVAE 122
Query: 119 LRDIARG 125
L I+
Sbjct: 123 LDRISTS 129
>gi|317008789|gb|ADU79369.1| flagellin B [Helicobacter pylori India7]
Length = 514
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 59/510 (11%), Positives = 142/510 (27%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA- 62
I TN +A+++ N NL +++SSGLR++ AAD+++ +IA ++S + L
Sbjct: 5 INTNIAALTSHAVGIQNNRNLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 63 -------------------------------VSDAIGLGS---------SKVDIAKAGMS 82
A G S + +
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELD 124
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA---------RGSSFNGENW 133
+ S ++ +G + + T +++ + + SSF+GE
Sbjct: 125 NIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIGSTSSDKIGHVRMETSSFSGEGM 184
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL------------DPETVLLDSST 181
L + + + + +D + T+ + +S
Sbjct: 185 LASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASY 244
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G ++ ++ +I + + + Q
Sbjct: 245 NVMATGGTPVQSGTVRDLTINGVEIGTVNDVHKNDADGRLINAINSVKDRTGVEASLDIQ 304
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A + + G + + + + +G + ++
Sbjct: 305 GRINLHSIDGRAISVHATSASGQVFGGGNFAGISGTQHAVIGRLTLTRTDARDIIVSGVN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G Y V+ + ++ + +
Sbjct: 365 FSHVGLHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ D+ +GS+ + + I + + V+ ++ D D A ES
Sbjct: 425 MIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESAN 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|330501124|ref|YP_004377993.1| flagellin domain-containing protein [Pseudomonas mendocina NK-01]
gi|328915410|gb|AEB56241.1| flagellin domain-containing protein [Pseudomonas mendocina NK-01]
Length = 279
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 3/178 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN+S++ L N L Q R+ +GLR++ AAD+AA IA + + + +
Sbjct: 3 LSIHTNYSSLVTQTNLGKTNNALGTNQQRLGTGLRINSAADDAAGLQIATRLNAQSRGMD 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S + A+ S+ D+M +K+ T D S+++E +L ++
Sbjct: 63 VAMRNTGDSISLLQTAEGAFSEMTDIMQRMKDLATQAANDTNSDDDRTSLKAEYDELGNE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
L +I + + GE + A + S T
Sbjct: 123 LTNIISNTKYAGEALFAAGGKLTAAMTFQIGSSSAETLSFNATANLTAVTGAITTIKA 180
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 40/95 (42%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
++ + ++T + ++G+ +R++ + + M+D + GR++DAD
Sbjct: 184 DDATNAGSAMDELETALDAVGTLRSQLGANINRLNHTANNLANMKDNTDMAKGRIMDADF 243
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A ES ++ Q + L ++SL
Sbjct: 244 AKESANMTKNSMLMQSGISMLKQAGQMPGMVMSLL 278
>gi|306516577|gb|ADM96177.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 78/205 (38%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 122 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGGRISSSG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 182 EVQFTLKNYNGIDDFQFQKVVISTS 206
>gi|226950079|ref|YP_002805170.1| flagellin [Clostridium botulinum A2 str. Kyoto]
gi|226842856|gb|ACO85522.1| flagellin [Clostridium botulinum A2 str. Kyoto]
Length = 284
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 64/172 (37%), Gaps = 3/172 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N ++++A + + D+++SG +V + D+ + ++ K L
Sbjct: 3 LSHNLASLNAFRNYSKVLREQSTALDKITSGYKVRRSKDDPNVMAQSEKTKIQIRGLQVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
S G S + A+ G+ +++ IK + + IQ+EI +L + +
Sbjct: 63 SRNAQDGVSMLQTAEGGLENIGNMLMRIKELTIQAANGTNNLDDQEVIQNEINELIAGIE 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
A+G+ FNG L S + + + I + +
Sbjct: 123 TTAKGTEFNGVKLLSQGNKFSNQADVMTKSVPIGANVGDLEDIPFYNLTTEG 174
Score = 76.3 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 29/251 (11%), Positives = 71/251 (28%)
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++ V + + K A+ D + T L
Sbjct: 28 DKITSGYKVRRSKDDPNVMAQSEKTKIQIRGLQVASRNAQDGVSMLQTAEGGLENIGNML 87
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + N + A + + +++ D
Sbjct: 88 MRIKELTIQAANGTNNLDDQEVIQNEINELIAGIETTAKGTEFNGVKLLSQGNKFSNQAD 147
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ ++ ++ D + +T + + E + ++ I+ +
Sbjct: 148 VMTKSVPIGANVGDLEDIPFYNLTTEGLDIKGKINVTDASKLGESLDAVNNAIETVLSVR 207
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+ GS+ +R + I + +E LVDAD+A E + Q ++ +
Sbjct: 208 SEYGSLENRFEECINNIGEISFKMEGANSELVDADVAEEMMIYAKSDILYQSSLAIMRQT 267
Query: 440 NNSTARILSLF 450
NN +L +
Sbjct: 268 NNFPMDVLKIL 278
>gi|87242504|gb|ABD33791.1| flagellin [Bacillus weihenstephanensis]
Length = 354
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + +
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARENGLGVAANNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ G + K++ E L++Q+ I++ + FN + L
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTGDNQKALDKEFAALKNQIDYISKNTEFNDKKLLDGSN 120
Query: 139 GSSTASI 145
S +
Sbjct: 121 KSISIQT 127
>gi|218457918|ref|ZP_03498009.1| flagellin domain protein [Rhizobium etli Kim 5]
Length = 179
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 79/146 (54%), Positives = 100/146 (68%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN++AM+A Q LR IN L+ Q VSSG RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNNAAMAALQTLRGINQGLQTTQAHVSSGYRVGQASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A + M AIDV+ IK K+ A E G D +Q EI+QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYSAMDSAIDVVGDIKAKLVAATENGVDKAKVQEEISQLQQQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
+A+ +SF+GENW+ G+ +
Sbjct: 121 SVAQSASFSGENWVAGADGTKNVVAS 146
>gi|306516557|gb|ADM96167.1| FlaA [Campylobacter jejuni]
gi|306516579|gb|ADM96178.1| FlaA [Campylobacter jejuni]
gi|306516593|gb|ADM96185.1| FlaA [Campylobacter jejuni]
gi|306516623|gb|ADM96200.1| FlaA [Campylobacter coli]
gi|306516631|gb|ADM96204.1| FlaA [Campylobacter coli]
Length = 206
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 78/205 (38%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 122 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 182 EVQFTLKNYNGIDDFQFQKVVISTS 206
>gi|115381330|gb|ABI96348.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Muenchen]
Length = 220
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAK 147
+ A
Sbjct: 121 NTLTIQVGAN 130
>gi|306516555|gb|ADM96166.1| FlaA [Campylobacter jejuni]
gi|306516587|gb|ADM96182.1| FlaA [Campylobacter jejuni]
gi|306516619|gb|ADM96198.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 78/205 (38%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 122 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGGRISTSG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 182 EVQFTLKNYNGIDDFQFQKVVISTS 206
>gi|330961211|gb|EGH61471.1| flagellin [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 282
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 73/221 (33%), Gaps = 3/221 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L +R+S+G +++ A+D+A + S +
Sbjct: 3 LTVNTNVTSLNVQKNLGRASDALSKSMERLSTGKKINTASDDAGGSVTQTKITSQIRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S V + + +++ ++ ++ ++ E Q+ +
Sbjct: 63 VAMKNANDGISIVQTTEGALQESVSILQRMRELAVQSRNDSNSSEGRDALNKEFAQMSLE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA+ ++ NG+N L + T + S + ++
Sbjct: 123 LTRIAQSTNLNGKNLLDGSASTMTFQVGADSGASNQISVTLSASFDANTMGVGSAITIVG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
S++ E + + ST
Sbjct: 183 SNSAAAETNFSAAIAAIDSALSTINNTRSDLGAVQNRLTST 223
Score = 74.0 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 54/138 (39%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V +S + +M + +++ + ++ ID+ +
Sbjct: 145 MTFQVGADSGASNQISVTLSASFDANTMGVGSAITIVGSNSAAAETNFSAAIAAIDSALS 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ +R+ ++ + + + R+ D D A+E+ +L+ QT QQ +
Sbjct: 205 TINNTRSDLGAVQNRLTSTISNLQNINANASQALSRIEDTDFAAETAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 SVLAQANQLPSAVLKLLQ 282
>gi|148380624|ref|YP_001255165.1| flagellin [Clostridium botulinum A str. ATCC 3502]
gi|258676990|ref|YP_001388379.2| flagellin [Clostridium botulinum A str. Hall]
gi|261876171|ref|YP_001384910.1| flagellin [Clostridium botulinum A str. ATCC 19397]
gi|148290108|emb|CAL84227.1| flagellin [Clostridium botulinum A str. ATCC 3502]
gi|254914205|gb|ABS34873.2| flagellin [Clostridium botulinum A str. ATCC 19397]
gi|255928859|gb|ABS37403.2| flagellin [Clostridium botulinum A str. Hall]
Length = 284
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 64/172 (37%), Gaps = 3/172 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N ++++A + + D+++SG +V + D+ + ++ K L
Sbjct: 3 LSHNLASLNAFRNYSKVLREQSTALDKITSGYKVRRSKDDPNVMAQSEKTKIQIRGLQVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
S G S + A+ G+ +++ IK + + IQ+EI +L + +
Sbjct: 63 SRNAQDGVSMLQTAEGGLENIGNMLMRIKELTIQAANGTNNLDDQEVIQNEINELIAGIE 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
A+G+ FNG L S + + + I + +
Sbjct: 123 TTAKGTEFNGVKLLSQGNKFSDQTNVMTKSVPIGANVGDLEDIPFYNLTTEG 174
Score = 75.9 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/251 (11%), Positives = 71/251 (28%)
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++ V + + K A+ D + T L
Sbjct: 28 DKITSGYKVRRSKDDPNVMAQSEKTKIQIRGLQVASRNAQDGVSMLQTAEGGLENIGNML 87
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + N + A + + +++ +
Sbjct: 88 MRIKELTIQAANGTNNLDDQEVIQNEINELIAGIETTAKGTEFNGVKLLSQGNKFSDQTN 147
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ ++ ++ D + +T + + E + ++ I+ +
Sbjct: 148 VMTKSVPIGANVGDLEDIPFYNLTTEGLDIKGKINVTDASKLGESLDAVNNAIETVLSVR 207
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+ GS+ +R + I + +E LVDAD+A E + Q ++ +
Sbjct: 208 SEYGSLENRFEECINNIGEISFKMEGANSELVDADVAEEMMIYAKSDILYQSSLAIMRQT 267
Query: 440 NNSTARILSLF 450
NN +L +
Sbjct: 268 NNFPMDVLKIL 278
>gi|3851064|gb|AAC72198.1| flagellin [Pseudomonas putida]
Length = 278
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 76/221 (34%), Gaps = 3/221 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN +++ + L + L R+SSGL+++ A D+AA IA M S +
Sbjct: 3 LTVNTNITSLGVQKNLNRASEALSTSMTRLSSGLKINSAKDDAAGLQIATRMTSQIRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ M + +++ ++ D ++ E + S+
Sbjct: 63 MAIKNANDGISIAQTAEGAMQEQTNILQRMRELAVQSRNDSNSTNDRVALDKEFQSMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA + NG+N L T + + + + + T D + +
Sbjct: 123 LTRIANSTQLNGKNLLDGSASVMTFQVGSNTGSANQITIDLSAKFTASDLGVTSSINIQG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
S T E + + + + ST
Sbjct: 183 SDTTTAEANFSAAVSAIDAALQTINSNRADLGAAQNRLTST 223
Score = 76.7 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 53/134 (39%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + + + + + + + +D + VS ID ++
Sbjct: 145 MTFQVGSNTGSANQITIDLSAKFTASDLGVTSSINIQGSDTTTAEANFSAAVSAIDAALQ 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R+ + ++ + + E GR+ D D A+E+ +L+ QT QQ +
Sbjct: 205 TINSNRADLGAAQNRLTSTINNLQNINENAEAARGRVQDTDFAAETAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARIL 447
L+ N +L
Sbjct: 265 SVLAQANQLPQSVL 278
>gi|306516615|gb|ADM96196.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 78/205 (38%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 122 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISTSG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 182 EVQFTLKNYNGIDDFQFQKVVISTS 206
>gi|113911633|gb|ABI48298.1| Fla2 flagellin [Roseburia hominis]
Length = 275
Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 39/248 (15%), Positives = 91/248 (36%), Gaps = 3/248 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N +A+ S++LR +E ++++G +++ A D+AA I++ M+ L+
Sbjct: 2 VVNHNMAAICESRQLRYNVKKMEKSSKKLATGYKLNTANDDAAGLQISETMRHHVKGLNK 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQL 119
S G S + A A + + DV+ + T +D ++IQ E+ QL ++
Sbjct: 62 ASRNSQDGISMLQTADAALQETQDVLDRMVELTTQAANDINTDSDRRAIQDELDQLNKEV 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FN + L + + G+ + L + V + S
Sbjct: 122 DRIAYTTHFNQQYMLAEGTPQAAPGYYRIQSGALNGQAIDIHFVNASKESLGTDKVNVSS 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+E ++ + + + + + + ++ + ++ N
Sbjct: 182 HAKASESITMVQDAIEQAALWRDEFGSQQERLEHAVRNTDNTSQNTQSAESGIRDTNMNM 241
Query: 240 DQAKGIAT 247
+
Sbjct: 242 EMVLYSTN 249
Score = 67.8 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 21/244 (8%), Positives = 57/244 (23%)
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
+ +++ T +K N ++ ++ AA
Sbjct: 32 TGYKLNTANDDAAGLQISETMRHHVKGLNKASRNSQDGISMLQTADAALQETQDVLDRMV 91
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
+ A + + T+ +
Sbjct: 92 ELTTQAANDINTDSDRRAIQDELDQLNKEVDRIAYTTHFNQQYMLAEGTPQAAPGYYRIQ 151
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
L + + + + + + E ++ + I+ A + GS
Sbjct: 152 SGALNGQAIDIHFVNASKESLGTDKVNVSSHAKASESITMVQDAIEQAALWRDEFGSQQE 211
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
R+ + + D +M E S + + L+ N+ +L
Sbjct: 212 RLEHAVRNTDNTSQNTQSAESGIRDTNMNMEMVLYSTNRILVHASQSILAQYNDDAKSVL 271
Query: 448 SLFR 451
+ +
Sbjct: 272 EILK 275
>gi|306516583|gb|ADM96180.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 78/205 (38%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNAKANSDLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 122 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 182 EVQFTLKNYNGIDDFKFQKVVISTS 206
>gi|254993366|ref|ZP_05275556.1| flagellin [Listeria monocytogenes FSL J2-064]
Length = 147
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 59/145 (40%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN ++ + LR N + Q+R++SG R++ + D+AA ++ M + L A
Sbjct: 3 VNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S +G + A + +S ++ ++ D K +E L +L
Sbjct: 63 SKNSSMGIDLLQTADSALSSMSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKELD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
+A +++N L + +
Sbjct: 123 HVADTTNYNNIKLLDQTATGAATQV 147
>gi|304321141|ref|YP_003854784.1| flagellin protein [Parvularcula bermudensis HTCC2503]
gi|303300043|gb|ADM09642.1| flagellin protein [Parvularcula bermudensis HTCC2503]
Length = 681
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 102/273 (37%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SI N SA A + L++ N LE Q VS+G R++ A DNAA WSI+ IM++D +
Sbjct: 1 MSSINFNASASVALRSLQETNRMLETTQQLVSTGKRINSAKDNAAIWSISTIMQADVSSF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+++D++ LG+S V +A + +D++ +K I + E D IQS+I L++Q+
Sbjct: 61 KSITDSLNLGASTVGVASSASETVVDLLQDMKALIVSAQEENVDRNKIQSDIDALRNQIT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ FNG N L G+ + + + + ++
Sbjct: 121 STVNSAQFNGLNLLNNSQGTVDILASLNRSSTGNVAPTRITINGQDLTDTQGTSGGSITA 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + D + D + + A
Sbjct: 181 GTASTVVAGRRVDESGFTGASNVTDSLRAGGDGTLDLRLTTGVADDLRYFVELDGGARSF 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
A+ A A G + +
Sbjct: 241 WTNTAASGTSVSGIATALEAAAKGALNASTVGT 273
>gi|78356546|ref|YP_387995.1| flagellin [Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|78218951|gb|ABB38300.1| flagellin [Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
Length = 297
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 76/203 (37%), Gaps = 3/203 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N A +AS+ L NL R+SSGLRV AAD+AA +I ++M+++ ++
Sbjct: 4 VINHNLMAQNASRNLSTAYGNLSTSVRRLSSGLRVGTAADDAAGMAIRELMRANIASMHQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S + A +S + + +K I SE + S++
Sbjct: 64 GVRNANDAISLLQTADGALSVIDEKLIRMKELAEQAATGTYTSDQRLLIDSEYQAMASEI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA + FNG L +L SST + V ++ G + DYY S
Sbjct: 124 TRIANSTDFNGIQLLNGNLSSSTHDGSGVVSRGKMKIHFGTANDSAEDYYYIQIGTATAS 183
Query: 180 STDGTERYGLLDRNHKIKVEPQV 202
+ + I +
Sbjct: 184 ALGVGNQADATFGGFAISTQSAA 206
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 48/140 (34%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + D + V A + + A ++ + ID I
Sbjct: 158 MKIHFGTANDSAEDYYYIQIGTATASALGVGNQADATFGGFAISTQSAAQQALVAIDKAI 217
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+G + +R+ +++ + ++ R+ D D+++E T Q Q A
Sbjct: 218 VSKDNIRAALGVLQNRLENTITNLQIQAENLQAAESRISDVDVSNEMTEFVRQQILTQSA 277
Query: 433 VQALSIVNNSTARILSLFRG 452
V LS N+ + L G
Sbjct: 278 VAMLSQANSLPRMAMQLLGG 297
>gi|218677522|ref|ZP_03525419.1| flagellin C protein [Rhizobium etli CIAT 894]
Length = 302
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 85/226 (37%), Positives = 117/226 (51%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN++AM+A Q LR +N L+ Q VSSG RV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNNAAMAALQTLRGVNQGLQTTQAHVSSGYRVGKAADNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A + M AIDV+ IK K+ A E G D +Q EI+QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYSAMDSAIDVVGDIKAKLVAATENGVDKAKVQEEISQLQQQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A+ +SF+GENW+ G+ + GS + + + +
Sbjct: 121 SVAQSASFSGENWVAGANGTKNVVASFVRDGSNAVSVVMTDYVLDNSSAGNVLFGMSGGA 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + V + + + ++ T K T
Sbjct: 181 VETSTGILGTSNGATGSVYAMDITNFTLGQIQSALTNVESALKSMT 226
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/106 (48%), Positives = 75/106 (70%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ +A ++ ++ +++ +K T+A +GS+S RI LQE+F+ + D+++ G
Sbjct: 197 SVYAMDITNFTLGQIQSALTNVESALKSMTSAGAALGSVSKRIELQENFVSALSDSIDSG 256
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
VGRLVDADM ES++LSALQTQQQLAVQ+LSI N+S+ ILSLFRG
Sbjct: 257 VGRLVDADMEEESSKLSALQTQQQLAVQSLSIANSSSQTILSLFRG 302
>gi|115381306|gb|ABI96336.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Kottbus]
Length = 220
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAK 147
+ A
Sbjct: 121 NTLTIQVGAN 130
>gi|118477193|ref|YP_894344.1| flagellin [Bacillus thuringiensis str. Al Hakam]
gi|229183950|ref|ZP_04311166.1| Flagellin [Bacillus cereus BGSC 6E1]
gi|118416418|gb|ABK84837.1| flagellin [Bacillus thuringiensis str. Al Hakam]
gi|228599602|gb|EEK57206.1| Flagellin [Bacillus cereus BGSC 6E1]
Length = 269
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 59/169 (34%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A+DN A +I M + +
Sbjct: 6 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNHASDNPANVAIVTRMHARASGMRVA 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + ++++ +++ + S+ E L Q+
Sbjct: 66 IRNNEDAISMLRTAEAALQTVMNILQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIG 125
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T + + Q
Sbjct: 126 YIGETTEFNDLSVFDGQNRPVTLDDIGHTVNITKHIPSSPTQHDINIST 174
Score = 90.6 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 27/239 (11%), Positives = 68/239 (28%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T +
Sbjct: 30 MEHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVMNI 89
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + T T + + + L
Sbjct: 90 LQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLD 149
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + I+ ++ + +G++ +R+
Sbjct: 150 DIGHTVNITKHIPSSPTQHDINISTEQEARAAIRKIEEALQNVSLHRADLGTMMNRLQFN 209
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N I L +
Sbjct: 210 IENLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMISKLLQ 268
>gi|260768762|ref|ZP_05877696.1| flagellin protein flaA [Vibrio furnissii CIP 102972]
gi|260616792|gb|EEX41977.1| flagellin protein flaA [Vibrio furnissii CIP 102972]
Length = 277
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 3/141 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN++ + L +N L +R+S+GLR++ AAD+AA IA +++ + +S
Sbjct: 4 SLHTNYANLVTQNNLNSVNKALTTSMERLSTGLRINSAADDAAGLQIANRLEAQSRGMSV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S + A+ M + ++ +K+ T D ++QSE L QL
Sbjct: 64 GMRNSQDAISMMQTAEGSMDEMTNMAYRMKDLATQAANGTNSAEDIAAMQSEFDALAGQL 123
Query: 120 RDIARGSSFNGENWLRTDLGS 140
+ ++F G+ L D
Sbjct: 124 GKMQTSTNFGGQQLLGEDGSF 144
Score = 75.5 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 39/103 (37%)
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
+ E++ +D+ I +A G+ + + + + M + V+
Sbjct: 174 SITGFASVTLGTDSGEIMGDLDSFIGELGSARSAFGAQINNLEHNINNLANMVENVDASK 233
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
GR++D D A ES +S Q Q Q LS +S+
Sbjct: 234 GRIMDTDFAKESGVMSKNQMLMQAGAQMLSATKMMPQLAMSML 276
>gi|306516597|gb|ADM96187.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 74/179 (41%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNAKANSDLNSKSLDQSLARLSSGLRINSAADDASGMAIADSLRSQASTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 62 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSTKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+IA +SFNG+ L + + I S + + + S
Sbjct: 122 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGVTRFETGGRVSSS 180
>gi|220904301|ref|YP_002479613.1| flagellin domain-containing protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868600|gb|ACL48935.1| flagellin domain protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 302
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 70/181 (38%), Gaps = 3/181 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N A + ++ L L R+S+GLRV+ AAD+AA +I ++ ++D L
Sbjct: 3 LVINHNLMAANTARNLNAHYSQLSKSVQRLSTGLRVNSAADDAAGLAIRELQRADIATLQ 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ S + A + + ++ +K T I+SE + S+
Sbjct: 63 QGARNANDAISMIQTADGALGVIDEKLTRMKELAEQAATGTYDSTQRLMIESEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG + L L S T + ++ G + DYY
Sbjct: 123 ITRIANATDFNGIHLLNGSLSSDTHDGSGMTSTGKLKVHFGTGNDSAEDYYYIKIGNSTA 182
Query: 179 S 179
S
Sbjct: 183 S 183
Score = 96.3 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 24/207 (11%), Positives = 60/207 (28%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A + + + A + + + ++ +
Sbjct: 96 AEQAATGTYDSTQRLMIESEYQAMASEITRIANATDFNGIHLLNGSLSSDTHDGSGMTST 155
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ T + + + G + + + + + A + +
Sbjct: 156 GKLKVHFGTGNDSAEDYYYIKIGNSTASALGVGNQAIDDATGQLRDGGTVSTQQAAQRAL 215
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
I I +G++ +R+ + + + ++ R+ D D+A+E T+
Sbjct: 216 DAITNAIVSKDKIRAHLGAMQNRLENTITNLNIQAENLQAAESRISDVDVATEMTQFVRN 275
Query: 426 QTQQQLAVQALSIVNNSTARILSLFRG 452
Q Q AV LS N+ + L G
Sbjct: 276 QILSQSAVAMLSQANSLPQMAMQLIGG 302
>gi|28211334|ref|NP_782278.1| flagellin [Clostridium tetani E88]
gi|28203774|gb|AAO36215.1| flagellin [Clostridium tetani E88]
Length = 280
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 56/146 (38%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N ++++ ++ + V RVSSG +++ A D+ + ++ M+ + L
Sbjct: 7 LNHNLASLNVYREYSKNLKSNSVAMKRVSSGQKINSAKDDPNNLAKSERMRMNIRGLQMA 66
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLR 120
+ + G S + A +S ++ I+ + + EI+Q+ +
Sbjct: 67 NRNVQDGVSMLQSADGSLSSMNSILGRIRELSVQYGNGSNSKEDKEIIKEEISQMIASYD 126
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
+ S FNG + + +
Sbjct: 127 EAVANSEFNGVKLFDNKIKERSMQLG 152
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 32/94 (34%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ ++ + +D I K G+I ++ + ++ R+ DAD+A
Sbjct: 181 DADFTDKALEEVDKAINKVVDVRSKYGAIVNKFEGTMSNLSQYELITQESESRVRDADIA 240
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
E ++ + + N +L +
Sbjct: 241 EEMIEVARTSVLLDAGMAIMVQTNQLPQDMLKVL 274
>gi|169950608|gb|ACB05833.1| flagellin [Clostridium botulinum]
Length = 243
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
N +++SSGLR++ A D+AA +I++ M+ L+ S S + A+
Sbjct: 1 NTGNNGKAIEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQASRNSQDAISLIQTAEG 60
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ ++ ++ D +++Q E+ +LQS++ I+ + FN ++ +
Sbjct: 61 ALNETHSILQRMRELTVQAANDTNVTVDRENLQKEVAELQSEINRISSQTQFNTKSLING 120
Query: 137 DLGSSTASIA 146
+ ++
Sbjct: 121 AVSKXADAMT 130
Score = 89.0 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 33/88 (37%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
N + + + ++ ID I + K+G+ +R+ + + ++ R
Sbjct: 156 DNIKLDDTAANVTKQIATIDNAINSVSKERAKLGANQNRLEHTIANLDNSAENLQAAESR 215
Query: 410 LVDADMASESTRLSALQTQQQLAVQALS 437
+ D DMA E + Q A L+
Sbjct: 216 IRDVDMAKEMMNFTKTNILTQAAQAMLA 243
>gi|218135303|ref|ZP_03464107.1| hypothetical protein BACPEC_03208 [Bacteroides pectinophilus ATCC
43243]
gi|217990688|gb|EEC56699.1| hypothetical protein BACPEC_03208 [Bacteroides pectinophilus ATCC
43243]
Length = 270
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 45/262 (17%), Positives = 96/262 (36%), Gaps = 3/262 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N SAM+ +++L + +++SSG R++ +AD+AA SI++ M+S L+
Sbjct: 2 VVQHNLSAMNTNRQLGIVTSAQSTSTEKLSSGYRINRSADDAAGLSISEKMRSQIRGLNK 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
+ G S V +A+ +++ ++ + T TD +IQSEI QL S++
Sbjct: 62 AASNAQDGISLVQVAEGALNETHSILQRMNELATQAANDTNTSTDRTAIQSEIDQLTSEV 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I + FN N L S + S + L +
Sbjct: 122 NRIQSTTQFNSMNLLDGTFSSKNLQVGSLSGQSIGISIKNMDASSLGVNSLKVSSFASAG 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + + + + ++ ++ + + T + + + +
Sbjct: 182 SAMDKIQSAINLVSTQRSTLGALQNRLEHTINNLNTTAENTQAAESRIRDVDMATEMVEY 241
Query: 240 DQAKGIATIPVPLPAAPAAPNT 261
+ +A + A
Sbjct: 242 SKNNILAQAGQSMLAQANQATQ 263
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 41/110 (37%)
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ N+ + + + I + I + +G++ +R+ + + +
Sbjct: 161 NMDASSLGVNSLKVSSFASAGSAMDKIQSAINLVSTQRSTLGALQNRLEHTINNLNTTAE 220
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ R+ D DMA+E S Q L+ N +T +LSL +
Sbjct: 221 NTQAAESRIRDVDMATEMVEYSKNNILAQAGQSMLAQANQATQGVLSLLQ 270
>gi|312109499|ref|YP_003987815.1| flagellin domain protein [Geobacillus sp. Y4.1MC1]
gi|311214600|gb|ADP73204.1| flagellin domain protein [Geobacillus sp. Y4.1MC1]
Length = 269
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/223 (14%), Positives = 71/223 (31%), Gaps = 5/223 (2%)
Query: 8 HSAMSASQKL--RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
+ +M A + NL +++SSGL++ A+D+AA SI++ +++ L+
Sbjct: 5 NQSMIAFSTYRYQRNVTNLTKTLEKLSSGLKIYRASDDAAGLSISETLRAQIRGLAQSQR 64
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDI 122
+ G S + A+ G+ ++ I+ D + Q E+ QL + D
Sbjct: 65 NMQDGLSVLKAAEEGLMNVNHLLQRIRELAVQNANDTLDAKDRAASQKELDQLLQAIDDT 124
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A FN + L ++ + A + + ++ +
Sbjct: 125 AEKLEFNTKKILGENIPLTLQVGANPGQTITVDMVDTSTTSLGLNGATLLTRTDAEQLIT 184
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+ N V + +
Sbjct: 185 KVDNALKKVTNDLTNVGADYEAIEHHLNNTMLKEANLTTSESM 227
Score = 54.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 37/94 (39%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ E++++ +D +K T +G+ I + L + L DA++A
Sbjct: 175 TRTDAEQLITKVDNALKKVTNDLTNVGADYEAIEHHLNNTMLKEANLTTSESMLRDANIA 234
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
E + + +QQ +S +N + L L
Sbjct: 235 REMMNYISGKIRQQGDYLLISHINRNVEETLKLL 268
>gi|115381338|gb|ABI96352.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Panama]
Length = 220
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 65/186 (34%), Gaps = 3/186 (1%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR++ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ A I Q +D + + + T Y +
Sbjct: 121 NTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVKDTAVTTTAYADNGTTLDVS 180
Query: 198 VEPQVL 203
Sbjct: 181 GLTDAA 186
>gi|87242350|gb|ABD33714.1| flagellin [Bacillus thuringiensis serovar guiyangiensis]
Length = 338
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 89/271 (32%), Gaps = 3/271 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + +
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+++ +++ + +++ E QL+ Q++ I + FN +N L
Sbjct: 61 QSVSNILLRMRDLANQSANGTNTDENKAAMEKEFGQLKDQIKYITDNTQFNDKNLLDAAP 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
G++ + +++ + L + V + S + +
Sbjct: 121 GATKSIAIQTLDSDQASTQIEIKIAGSSLTALGLDNVQIGSESVSAKDLANATTAMTRLD 180
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
+ + K T A + A IA AA
Sbjct: 181 TAAATDEEREFNIQIAQEAFDKIKGFMTDRTAVDSIQLKFTEYAATIADPAKTKGEKDAA 240
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
+KS S+ + +
Sbjct: 241 AKAIFTDFDAKSASLPTAGPVGTVNAHTAVN 271
Score = 66.7 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 31/74 (41%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
V+ ID +K +G+ +R+ + +K ++ ++ DADMA E
Sbjct: 265 NAHTAVNKIDAALKTVADNRATLGATLNRLDFNVNNLKSQSASMASAASQIEDADMAKEM 324
Query: 420 TRLSALQTQQQLAV 433
+ ++ + + +
Sbjct: 325 SEMTKFKILNEAGI 338
>gi|90577369|ref|ZP_01233180.1| lateral flagellin LafA [Vibrio angustum S14]
gi|90440455|gb|EAS65635.1| lateral flagellin LafA [Vibrio angustum S14]
Length = 289
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 69/179 (38%), Gaps = 3/179 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN++++ L + + L +R+S+G RV+ AAD+AA IA + + +S
Sbjct: 3 LSMHTNYASLVTQNTLSNTSNLLNTAMERLSTGFRVNSAADDAAGLQIATRLDAQTRGMS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQ 118
G S + A+ M + +++ + + T D ++ +E QL +
Sbjct: 63 VAMRNSQDGISMMQTAEGAMDEMTNIVYRMNDLATQASNGTVSANDRVALDAEFQQLGEE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
L ++ +SF G++ L ++ + V T
Sbjct: 123 LANVMASTSFGGQDILTDAGSFGAGAVNFQIGTQSGDQLAVDVSTEVQAVNATIGTSGS 181
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 35/80 (43%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+K A +G+ +R+ + M + V GR+VDAD A ES+ ++ Q Q
Sbjct: 210 LKEIGDARSALGANINRLDHTITNLGNMVENVSAAKGRIVDADFAVESSSMTKNQMLMQA 269
Query: 432 AVQALSIVNNSTARILSLFR 451
LS N +SL R
Sbjct: 270 GTTVLSQTNQLPGMAMSLLR 289
>gi|4581625|gb|AAD24679.1|AF078154_1 flagellin [Burkholderia pseudomallei]
Length = 387
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 54/353 (15%), Positives = 119/353 (33%), Gaps = 3/353 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQGALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A +G++ + + I+ +D+ ++Q ++ Q S
Sbjct: 61 NQGVSNANDGVSILQTASSGLTSLTNSLQRIRQLAVQASNGPLSASDASALQHQVAQQIS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG+N L G+ + + +V + D + I + L
Sbjct: 121 EVNRIASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVDLTQSMSAAKIGGGMVQTGQTL 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + G + E + + + T + +T A ++ A
Sbjct: 181 GTIKVAIDSSGAAWSSGSTGQETTQINVVSDGKGGFTFTDQNNQALSSTAVTAVFGSSTA 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
A + + L + + + + + + + +A S++ + T
Sbjct: 241 GTGTAASPSFQTLALSTSATSALSATDQANATAMVAQINAVNKPQTVSNLDISTQTGAYQ 300
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
T + + + + A
Sbjct: 301 AMVSIDNALATVNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSADFA 353
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/385 (11%), Positives = 108/385 (28%), Gaps = 6/385 (1%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ ++ ++ +S+AI +S+ K + D + + T++Q+Q+ + +G
Sbjct: 9 NSLVAQQNLNGSQGALSQAITRLSSGK-----RINSAADDAAGLAIATRMQTQINGLNQG 63
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + SS + + + + +
Sbjct: 64 VSNANDGVSILQTASSGLTSLTNSLQRIRQLAVQASNGPLSASDASALQHQVAQQISEVN 123
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
R + + + V G + + ++ T I
Sbjct: 124 RIASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVDLTQSMSAAKIGGGMVQTGQTLGTI 183
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
AA ++ +T T+ S N+ S T
Sbjct: 184 KVAIDSSGAAWSSGSTGQETTQINVVSDGKGGFTFTDQNNQALSSTAVTAVFGSSTAGTG 243
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + T + ++ L + + + + + +
Sbjct: 244 TAASPSFQTLALSTSATSALSATDQANATAMVAQINAVNKPQT-VSNLDISTQTGAYQAM 302
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID + +G+ +R + + + + ++ AD A E+ LS
Sbjct: 303 VSIDNALATVNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSADFAQETANLSRA 362
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q QQ + L+ N+ ++L L
Sbjct: 363 QVLQQAGISVLAQANSLPQQVLKLL 387
>gi|228945362|ref|ZP_04107717.1| Flagellin [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|228814334|gb|EEM60600.1| Flagellin [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
Length = 266
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 59/169 (34%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G ++++A+DN A +I + + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNNASDNPANIAIVTRIHARASGMRVT 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + ++++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVMNILQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T + Q
Sbjct: 123 YIGETTEFNDLSVFDGQNRPVTLDDIGHKVNMTKPIPPSPTQHDIKIST 171
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 67/239 (28%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T +
Sbjct: 27 MEHLATGKKLNNASDNPANIAIVTRIHARASGMRVTIRNNEDAISMLRTAEAALQTVMNI 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + T T + + + L
Sbjct: 87 LQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + I+ ++ + +G++ +R+
Sbjct: 147 DIGHKVNMTKPIPPSPTQHDIKISTEQEARAAILKIEEALQNVSLHRANLGAMMNRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 207 IENLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSKLLQ 265
>gi|228984845|ref|ZP_04145015.1| Flagellin [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
gi|229155331|ref|ZP_04283441.1| Flagellin [Bacillus cereus ATCC 4342]
gi|228628046|gb|EEK84763.1| Flagellin [Bacillus cereus ATCC 4342]
gi|228774795|gb|EEM23191.1| Flagellin [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 260
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 72/170 (42%), Gaps = 3/170 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R+++A+D+AA +IA M++ LS + G
Sbjct: 1 MRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRAHESGLSVAARNTSDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIARGSS 127
S + A + + +++ +++ I++ E L+ Q+ ++ +
Sbjct: 61 ISLIRTADSALQSVSNILLRMRDIANQTANGTNKDTDIEALGKEFAALKEQITYVSDNTK 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
FNG L+ + + S I+ ++ ++++D ++
Sbjct: 121 FNGRELLKGGDDINIQTYDGSDESQQIKIKISELDLSSLDTGEVTDSDTA 170
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 40/101 (39%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+T + VS +D I + ++G+ +R+ + ++ ++
Sbjct: 160 DTGEVTDSDTARGTVSTLDDAITNIASKRAELGATLNRLDYNTQNVNSEAASMAASASQI 219
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DADMA E + ++ + + + LS N + + L +
Sbjct: 220 EDADMAKEMSEMTKFKILSEAGISMLSQANQTPQMVSKLLQ 260
>gi|319764546|ref|YP_004128483.1| flagellar hook-associated protein 3 [Alicycliphilus denitrificans
BC]
gi|317119107|gb|ADV01596.1| flagellar hook-associated protein 3 [Alicycliphilus denitrificans
BC]
Length = 416
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 60/450 (13%), Positives = 122/450 (27%), Gaps = 47/450 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + + + L +L +Q+ ++SG RV A+D+ + A+ + +
Sbjct: 7 VSTANMYDATLRNLNARQKSLVDLQENLTSGKRVVRASDDPVAAAQAERALTRISRIQTE 66
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
A+ + + + A++ + AI ++ I+ + A D K+ +I L+ QL
Sbjct: 67 QRALEVQRNAIAQAESTLGDAIGLVQEIRQLVVAAGGGALKPEDRKTYADQIQSLREQLT 126
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
D+ NG L + Q ++ + +
Sbjct: 127 DVINRKDTNGIPLLGALGSALQPFAGPLSGSPDYLFAGLPGQASSSSTAIATTLDGHSAL 186
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
R G+ + L ++ D + T G T
Sbjct: 187 MFDPRRDGVYQAGVSTIPADRSLTTSAITAVDRNQITGDGYRIDFTAVGPGATPGTTTAT 246
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
T V + + V I
Sbjct: 247 YTITNTTTGVTSAPVTVPDFASDKPATIAVTGVPGMTFSI-------------------- 286
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + L ++ + + A
Sbjct: 287 -------------------SGTPAAGDAVTLQPSPSLMSTIDSAIEGIRGAANNNAATQA 327
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + ++ ID ++ G G + +R +E R D DM +
Sbjct: 328 VGQALANIDAGMERLNNMRGYAGELLNRADRITGDQSQRSIQLEADRSRAEDLDMVQGIS 387
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
Q Q A+Q+ ++V LSLF
Sbjct: 388 GFQNAQVGYQAALQSYAMVQK-----LSLF 412
>gi|237796106|ref|YP_002863658.1| flagellin [Clostridium botulinum Ba4 str. 657]
gi|229261725|gb|ACQ52758.1| flagellin [Clostridium botulinum Ba4 str. 657]
Length = 284
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 64/172 (37%), Gaps = 3/172 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N ++++A + + D+++SG +V + D+ + ++ K L
Sbjct: 3 LSHNLASLNAFRNYSKVLREQSTALDKITSGYKVRRSKDDPNVMAQSEKTKIQIRGLQVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
S G S + A+ G+ +++ IK + + IQ+EI +L + +
Sbjct: 63 SRNAQDGVSMLQTAEGGLENIGNMLMRIKELTIQAANGTNNLDDQEVIQNEINELIAGIE 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
A+G+ FNG L S + + + I + +
Sbjct: 123 TTAKGTEFNGVKLLSQGNKFSDQANVMTKSVPIGANVGDLEDIPFYNLTTEG 174
Score = 74.4 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/251 (11%), Positives = 71/251 (28%)
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++ V + + K A+ D + T L
Sbjct: 28 DKITSGYKVRRSKDDPNVMAQSEKTKIQIRGLQVASRNAQDGVSMLQTAEGGLENIGNML 87
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + N + A + + +++ +
Sbjct: 88 MRIKELTIQAANGTNNLDDQEVIQNEINELIAGIETTAKGTEFNGVKLLSQGNKFSDQAN 147
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ ++ ++ D + +T + + E + ++ I+ +
Sbjct: 148 VMTKSVPIGANVGDLEDIPFYNLTTEGLDIKGKINVTDASKLGESLDAVNNAIETVLSVR 207
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+ GS+ +R + I + +E LVDAD+A E + Q ++ +
Sbjct: 208 SEYGSLENRFEECMNNIGEISFKMEGANSELVDADVAEEMMIYAKSDILYQSSLAIMRQT 267
Query: 440 NNSTARILSLF 450
NN +L +
Sbjct: 268 NNFPMDVLKIL 278
>gi|87242344|gb|ABD33711.1| flagellin [Bacillus thuringiensis serovar andalousiensis]
Length = 319
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/238 (14%), Positives = 73/238 (30%), Gaps = 3/238 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGISLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++ E L+ Q+ I+ + FN + L
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTSENQAALDKEFGALKEQINYISTNTEFNDKKLLDGSN 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ + D T T +
Sbjct: 121 ETIAIQTLDNADEGKKIDIQLANVSTKSLSIDKLTIGGASQKTVDDVAAKFTALSTTTTT 180
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
+ ++ +V + + A T A +T A
Sbjct: 181 DKADIQKEVDAVMTEFNKVKGSMSAADAKAVTDKLEAYNTAADADKASTAKALGGAFD 238
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/276 (7%), Positives = 58/276 (21%)
Query: 158 NGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI 217
N ++ D + + N E Q D +
Sbjct: 44 NNTQDGISLIRTADSAMNSVSNILLRMRDLANQSANGTNTSENQAALDKEFGALKEQINY 103
Query: 218 STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASA 277
+ + + +
Sbjct: 104 ISTNTEFNDKKLLDGSNETIAIQTLDNADEGKKIDIQLANVSTKSLSIDKLTIGGASQKT 163
Query: 278 TYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
TT + ++ + + +
Sbjct: 164 VDDVAAKFTALSTTTTTDKADIQKEVDAVMTEFNKVKGSMSAADAKAVTDKLEAYNTAAD 223
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
T A V+ ID+ ++ + +G+ +R+ + +K
Sbjct: 224 ADKASTAKALGGAFDKTKVTVANPNAAVAAIDSALENIASNRATLGATLNRLDFNVNNLK 283
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
++ ++ DADMA E + ++ + + +
Sbjct: 284 SQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGI 319
>gi|296502361|ref|YP_003664061.1| flagellin [Bacillus thuringiensis BMB171]
gi|189339460|gb|ACD89087.1| flagellin [Bacillus thuringiensis serovar entomocidus]
gi|296323413|gb|ADH06341.1| flagellin [Bacillus thuringiensis BMB171]
Length = 272
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 3 INTNINSMRTQEYMRQNQDKMNTAMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D+ S+ E L+S++
Sbjct: 63 ARNTQDAMSALRTGDAALGSISNILLRMRDLATQASNGTNNTEDTASLNKEYEALKSEID 122
Query: 121 DIARGSSFNGENWLRTDLG 139
IA +SFNG +L TD G
Sbjct: 123 HIANKTSFNGIKFLSTDKG 141
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 27/210 (12%), Positives = 59/210 (28%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A+ L AA + S ++ + + +
Sbjct: 63 ARNTQDAMSALRTGDAALGSISNILLRMRDLATQASNGTNNTEDTASLNKEYEALKSEID 122
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
N T + + + + AN ++
Sbjct: 123 HIANKTSFNGIKFLSTDKGGAADIKVQLSDASGDTMTIDSLDAKKITTANLTTLADRGTA 182
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
E + +DT I+ A GS +R+ + + + ++ DADMA E +
Sbjct: 183 ETEIKALDTAIQELADARATFGSQLNRLDHNLNNVTSQATNMAAAASQIEDADMAKEMSE 242
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + + + LS N + + L +
Sbjct: 243 MTKFKILNEAGISMLSQANQTPQMVSKLLQ 272
>gi|168183265|ref|ZP_02617929.1| flagellin protein [Clostridium botulinum Bf]
gi|182673632|gb|EDT85593.1| flagellin protein [Clostridium botulinum Bf]
Length = 284
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 64/172 (37%), Gaps = 3/172 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N ++++A + + D+++SG +V + D+ + ++ K L
Sbjct: 3 LSHNLASLNAFRNYSKVLREQSTALDKITSGYKVRRSKDDPNVMAQSEKTKIQIRGLQVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
S G S + A+ G+ +++ IK + + IQ+EI +L + +
Sbjct: 63 SRNAQDGVSMLQTAEGGLENIGNMLMRIKELTIQAANGTNNLDDQEVIQNEINELIAGIE 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
A+G+ FNG L S + + + I + +
Sbjct: 123 TTAKGTEFNGVKLLSQGNKFSDQANVMTKSVPIGANVGDLEDIPFYNLTTEG 174
Score = 73.2 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/251 (10%), Positives = 71/251 (28%)
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++ V + + K A+ D + T L
Sbjct: 28 DKITSGYKVRRSKDDPNVMAQSEKTKIQIRGLQVASRNAQDGVSMLQTAEGGLENIGNML 87
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + N + A + + +++ +
Sbjct: 88 MRIKELTIQAANGTNNLDDQEVIQNEINELIAGIETTAKGTEFNGVKLLSQGNKFSDQAN 147
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ ++ ++ D + +T + + E + ++ I+ +
Sbjct: 148 VMTKSVPIGANVGDLEDIPFYNLTTEGLDIKGKINVTDASKLGESLDAVNNAIETVLSVR 207
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+ GS+ +R + I + +E L+DAD+A E + Q ++ +
Sbjct: 208 SEYGSLENRFEECMNNIGEISFKMEGANSELLDADVAEEMMIYAKSDILYQSSLAIMRQT 267
Query: 440 NNSTARILSLF 450
NN +L +
Sbjct: 268 NNFPMDVLKIL 278
>gi|91794986|ref|YP_564637.1| flagellin-like protein [Shewanella denitrificans OS217]
gi|91716988|gb|ABE56914.1| flagellin-like protein [Shewanella denitrificans OS217]
Length = 266
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 64/154 (41%), Gaps = 3/154 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN++++ + + N L +R+S+GLR++ +AD+AA IA M ++ +
Sbjct: 1 MLSVHTNYASLVSQGAVSKSNSLLTNAMERLSTGLRINSSADDAAGLQIANRMNANIKGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQS 117
A S I +S + + + + + K T D ++ +E L
Sbjct: 61 QAASRNISDATSMLQTGDGALEELTTIANRQKELATQAANGVNSQDDLDALDAEFQALIL 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
+ I +++ G N GS T I
Sbjct: 121 ESARITDKTTYAGNNLFTKLTGSVTFQIGADKTE 154
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/266 (15%), Positives = 76/266 (28%)
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
+ + + V K + + + + A L+ AN KG+
Sbjct: 1 MLSVHTNYASLVSQGAVSKSNSLLTNAMERLSTGLRINSSADDAAGLQIANRMNANIKGM 60
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
+ A + T G + + + +
Sbjct: 61 QAASRNISDATSMLQTGDGALEELTTIANRQKELATQAANGVNSQDDLDALDAEFQALIL 120
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ T Y + T L D ++ A +
Sbjct: 121 ESARITDKTTYAGNNLFTKLTGSVTFQIGADKTETLDVAITAPTAVAGDLKSAANARTAM 180
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+DT IK A +G+ +R+ + + + + GR++DAD A ES ++
Sbjct: 181 DAVDTNIKEVGTARSVLGASLNRLGHTASNLASVLENTQTAAGRIMDADFAVESANMTRN 240
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q Q LS N +T ++ L R
Sbjct: 241 QMLVQAGTTVLSSANQNTGLVMGLLR 266
>gi|87242336|gb|ABD33707.1| flagellin [Bacillus thuringiensis serovar coreanensis]
Length = 329
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + +
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++Q E +L+ Q++ I+ + FN ++ L
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTAENKAAMQKEFGELKDQIKYISENTQFNDQHLLNAAK 120
Query: 139 G 139
G
Sbjct: 121 G 121
Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 31/70 (44%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ ID +K +G+ +R+ + +K ++ ++ DADMA E + ++
Sbjct: 260 AITKIDAALKTVADNRATLGATLNRLDFNVNNLKSQSASMASAASQIEDADMAKEMSEMT 319
Query: 424 ALQTQQQLAV 433
+ + +
Sbjct: 320 KFKILNEAGI 329
>gi|262283892|gb|ACY40754.1| FlaA [Rhizobium leguminosarum bv. viciae]
Length = 301
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 88/226 (38%), Positives = 114/226 (50%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN SAM+A Q LR +N NL Q+ VSSG RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNSSAMAALQTLRSVNQNLNNTQNHVSSGYRVEKASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+G+G++KVD A M AIDV+ IK K+ A E G D +Q EI QLQ QL
Sbjct: 61 SAVSDALGVGAAKVDTAYTAMDSAIDVVGDIKAKLVAATENGVDKAKVQEEIGQLQQQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ +SFNGENW+ G+ + + GS I + + S
Sbjct: 121 SIAQSASFNGENWVAGADGTKSVVSSFVRDGSNAVSITTTDYILDSGSAGNVLFGMSGGS 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + + + ++ T K T
Sbjct: 181 VETSTGILGTSTGATGSIYAMDITSFTSGQIQSALTNVEAALKAMT 226
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 48/113 (42%), Positives = 74/113 (65%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ + +A ++ ++ ++ +K T+A +GS+SSRI Q+DF+
Sbjct: 189 GTSTGATGSIYAMDITSFTSGQIQSALTNVEAALKAMTSAGAALGSLSSRIDAQDDFVSA 248
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D+++ GVGRLVDA+M ES++LSALQTQQQLA+Q+LSI N+S+ ILSLFR
Sbjct: 249 LSDSIDSGVGRLVDANMEEESSKLSALQTQQQLAIQSLSIANSSSQNILSLFR 301
>gi|56460245|ref|YP_155526.1| flagellin [Idiomarina loihiensis L2TR]
gi|56179255|gb|AAV81977.1| Flagellin [Idiomarina loihiensis L2TR]
Length = 404
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/432 (10%), Positives = 104/432 (24%), Gaps = 43/432 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN L+ L+ +Q ++ ++ AD+ S + G
Sbjct: 3 LSTNLFFQRGLDSLQTSQSQLDRIQLMLTKQTKILSPADDPIGNSQVLALNEKIGQNEQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + ++ ++ D + + D + ++ +L+ I
Sbjct: 63 ERNSVTLENNLRREESVLNSITDAIQKARTLAVQAGNGSYDQTNRKAIAAELRDIESSI- 121
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ + G + ++ DD + D +
Sbjct: 122 -----FDLTNAQDESGEYIFAGYQNRTKPMEFDDATQSYQYVGDQGQRTIQLSPTLYLPA 176
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ N +V+ ++ D +T
Sbjct: 177 NDPGNKAFSNVSKRVDFELTGGNDYIEKVEVTDRNTLIADTEARI--------------- 221
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
AA N T +G + + + G S+ D
Sbjct: 222 ----------AAGDPTNFTVNFTGPDTYEIDDGVNPVVAGTITDGKVEYNGMSLELDKDN 271
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + +SG + + A
Sbjct: 272 MPAAGDSFSYSIGEPVSRNLLTQLGDLADVLEESGPESKGFHESEIAF------------ 319
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ +T I T +G+ + + + + +K + D D + T L
Sbjct: 320 ALDDFNTVIGDLTDTQASVGARLNVMDNAKLSNADIEIVNKKARSDISDVDYSEAMTDLV 379
Query: 424 ALQTQQQLAVQA 435
+T A Q
Sbjct: 380 KNETIYSAAQQV 391
>gi|189164117|gb|ACD77165.1| flagellin A2 [Bacillus thuringiensis serovar entomocidus]
Length = 277
Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 86/256 (33%), Gaps = 3/256 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTAMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D+ S+ E L+S++
Sbjct: 68 ARNTQDAMSALRTGDAALGSISNILLRMRDLATQASNGTNNTEDTASLSKEYEALKSEID 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SFNG +L TD G + + S + I ++
Sbjct: 128 HIANKTSFNGIKFLSTDKGGAADIKVQLSDASGDTMTIDSLDAKKITTANLTTLADRGTA 187
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + T A + A +
Sbjct: 188 ETEIKALDTAIQELADARATFGSQLNRLDHNLNNVTSQATNMAAAASQIEDADMAKEMSE 247
Query: 241 QAKGIATIPVPLPAAP 256
K +
Sbjct: 248 MTKFKILNEAGISMLS 263
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 27/210 (12%), Positives = 59/210 (28%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A+ L AA + S ++ + + +
Sbjct: 68 ARNTQDAMSALRTGDAALGSISNILLRMRDLATQASNGTNNTEDTASLSKEYEALKSEID 127
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
N T + + + + AN ++
Sbjct: 128 HIANKTSFNGIKFLSTDKGGAADIKVQLSDASGDTMTIDSLDAKKITTANLTTLADRGTA 187
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
E + +DT I+ A GS +R+ + + + ++ DADMA E +
Sbjct: 188 ETEIKALDTAIQELADARATFGSQLNRLDHNLNNVTSQATNMAAAASQIEDADMAKEMSE 247
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + + + LS N + + L +
Sbjct: 248 MTKFKILNEAGISMLSQANQTPQMVSKLLQ 277
>gi|87242416|gb|ABD33747.1| flagellin [Bacillus thuringiensis serovar leesis]
Length = 323
Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + +
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ ++ E L+ Q+ IA + FN +N L TD
Sbjct: 61 NSVSNILLRMRDIANQSANGTNTKENQGALNKEFDALKEQITYIAENTQFNDKNLLNTDQ 120
Score = 70.2 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 31/77 (40%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + ID +K +G+ +R+ + +K ++ ++ DADMA
Sbjct: 247 TSQNTLKAIDKIDNALKTIADNRATLGATLNRLDFNVNNLKSQSASMASAASQIEDADMA 306
Query: 417 SESTRLSALQTQQQLAV 433
E + ++ + + +
Sbjct: 307 KEMSEMTKFKILNEAGI 323
>gi|330972426|gb|EGH72492.1| flagellin [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 282
Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 80/221 (36%), Gaps = 3/221 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA +IA + S +
Sbjct: 3 LTVNTNVASLNVQKNLGRASDALSTSMTRLSSGLKINSAKDDAAGLNIATKINSQIKGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ + ++ +++ ++ TD ++ E TQ+ S+
Sbjct: 63 MAIKNANDGMSIAQTAEGALQESTNILQRMRELAVQSRNDSNSDTDRVALNKEFTQMSSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA+ ++ NG+N + + T + + S + ++
Sbjct: 123 LTRIAQSTNLNGKNLIDGSASTMTFQVGSNSGASNQITLTLSASFDANTLGVGSAITIVG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
S + E + + ST
Sbjct: 183 SDSAAAETNFSAAMAAIDSALQTINSTRSDLGAAQNRLTST 223
Score = 79.8 bits (194), Expect = 9e-13, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 56/138 (40%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + S + ++ + +D+ + ++ ID+ ++
Sbjct: 145 MTFQVGSNSGASNQITLTLSASFDANTLGVGSAITIVGSDSAAAETNFSAAMAAIDSALQ 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R+ ++ + + +GR+ D D A+E+ +L+ QT QQ +
Sbjct: 205 TINSTRSDLGAAQNRLTSTISNLQNINENASAALGRIQDTDFAAETAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 SVLAQANQLPSAVLKLLQ 282
>gi|330889070|gb|EGH21731.1| flagellin [Pseudomonas syringae pv. mori str. 301020]
Length = 282
Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 71/183 (38%), Gaps = 3/183 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSG +++ A D+AA IA + S +
Sbjct: 3 LTVNTNVASLNVQKNLGRASDALSTSMTRLSSGSKINSAKDDAAGMQIATKITSQIRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ + ++ +++ ++ TD ++ E T + S+
Sbjct: 63 MAIKNANDGMSLAQTAEGALQESTNILQRMRELAVQSRNDSNSSTDRDALNKEFTAMSSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA+ ++ NG+N L + T + + S + +
Sbjct: 123 LTRIAQSTNLNGKNLLDGSASTMTFQVGSNSGASNQITLTLSASFDANTLGVGSAVTIAG 182
Query: 179 SST 181
S +
Sbjct: 183 SDS 185
Score = 70.5 bits (170), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 57/138 (41%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + S + ++ + A +D+ + ++ ID+ ++
Sbjct: 145 MTFQVGSNSGASNQITLTLSASFDANTLGVGSAVTIAGSDSTTAETNFSAAIAAIDSALQ 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R+ ++ + + +GR+ D D A+E+ +L+ QT QQ +
Sbjct: 205 TINSTRADLGAAQNRLSSTISNLQNINENASAALGRVQDTDFAAETAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 SVLAQANQLPSAVLKLLQ 282
>gi|315927230|gb|EFV06579.1| flagellin A [Campylobacter jejuni subsp. jejuni DFVF1099]
Length = 185
Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 INNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+IA +SFNG+ L + + I S + + + S
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGGRISSS 183
>gi|228938873|ref|ZP_04101473.1| Flagellin [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228971754|ref|ZP_04132375.1| Flagellin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228978363|ref|ZP_04138740.1| Flagellin [Bacillus thuringiensis Bt407]
gi|228781380|gb|EEM29581.1| Flagellin [Bacillus thuringiensis Bt407]
gi|228787844|gb|EEM35802.1| Flagellin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228820722|gb|EEM66747.1| Flagellin [Bacillus thuringiensis serovar berliner ATCC 10792]
Length = 372
Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 60/138 (43%), Gaps = 3/138 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R+++A+D+AA +IA M++ L ++ G
Sbjct: 1 MRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + A + M+ +++ +++ + ++ E L+ Q+ I++ +
Sbjct: 61 MSLIRTADSAMNSVSNILLRMRDISNQSANGTNTDKNQSALDKEFAALKDQIDYISKNTE 120
Query: 128 FNGENWLRTDLGSSTASI 145
FN + L S
Sbjct: 121 FNDQKLLDGSKKSIAIQT 138
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/363 (9%), Positives = 81/363 (22%)
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
+ K + S+ + + S G T G S A S
Sbjct: 10 NQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADS 69
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ S I+ + E K +D
Sbjct: 70 AMNSVSNILLRMRDISNQSANGTNTDKNQSALDKEFAALKDQIDYISKNTEFNDQKLLDG 129
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
S + + A + + + +
Sbjct: 130 SKKSIAIQTLDNADTNKQIDIQLSNVSTKELKLDTLSIEGSSSKTFTITADDMLAVGTAN 189
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ A + A T + +
Sbjct: 190 ATAKAKAGTLKGLNVTTGDLTAAKTDVQDFRAAFDKVKGFMGSTEVTNIEKALTKFDGDQ 249
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ L T + ++ ID ++ + +G+ +R
Sbjct: 250 SLANAKAIGDALTSDLATTIAKDQTYSKNVSNASSAIASIDAALESIASNRATLGATLNR 309
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + +K ++ ++ DADMA E + ++ + + + LS N + +
Sbjct: 310 LDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSK 369
Query: 449 LFR 451
L +
Sbjct: 370 LLQ 372
>gi|307718455|ref|YP_003873987.1| hypothetical protein STHERM_c07630 [Spirochaeta thermophila DSM
6192]
gi|306532180|gb|ADN01714.1| hypothetical protein STHERM_c07630 [Spirochaeta thermophila DSM
6192]
Length = 415
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/437 (11%), Positives = 106/437 (24%), Gaps = 40/437 (9%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN L+ L VQ+R+SS R+ D D+ + A S L
Sbjct: 1 MNRISTNMPNDDMVYHLQKRERALYRVQNRMSSQTRIQDLRDDPVGAAHAVRYDSFLTRL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQS 117
+ + I ++ + + + ++++ I+ + ++ E+ +L
Sbjct: 61 TRYGENIAYVQDYYNVVEGHLKEGVEIVQRIRELTVQAAHGTYTPEDLKAMGKEVDELLE 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
QL IA G + + LL
Sbjct: 121 QLVQIANARGPEGRFLFGGARTRGEPF-------------------RVVRGNVPGADDLL 161
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + + + L G
Sbjct: 162 ITGVEYIGDITEKQTEIAEGAFITTGFSGNFVFGAQQQQVYATIDALDYRVGEAGYF--- 218
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ T G + + D + +
Sbjct: 219 ---------------SIDGVRIDVTEGDTLYSIVQKINDSAAPVRARIDPVNHSLILETT 263
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ V + + G S+ + + ++
Sbjct: 264 VPHQLWMEDGEGSVLQDLGIIAPPDVHRPPGNIAASAVHGGGSLFDVVMRVRDAMMVGDQ 323
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ + ID + G+IG+ +R+ + V + + VD D++
Sbjct: 324 EALGGRGLGMIDEALSALVGKMGEIGARGTRLRFAYAHNQEEIPDVTELYAKRVDLDVSE 383
Query: 418 ESTRLSALQTQQQLAVQ 434
L L+ + A+
Sbjct: 384 AIIELKRLEYTHKAALS 400
>gi|330829154|ref|YP_004392106.1| flagellin-like protein [Aeromonas veronii B565]
gi|328804290|gb|AEB49489.1| Flagellin-like protein [Aeromonas veronii B565]
Length = 267
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 3/145 (2%)
Query: 19 DINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAK 78
+ N L+ R+SSGLR++ A D+AA I+ + S L+ + G S A+
Sbjct: 2 NTNKALDTAYQRLSSGLRINSAKDDAAGLQISNRLTSQINGLNQGNRNANDGISLAQTAE 61
Query: 79 AGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
M + + ++ D ++Q E+ QL +++ IA+ ++F G L
Sbjct: 62 GAMEEITGMFQRMRVLAEQSANGSNTNADRSALQQEVKQLATEINRIAKDTTFGGTKLLD 121
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGK 160
A +
Sbjct: 122 GTYKGVFQVGADAKQTISFSLTQAN 146
Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 39/97 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + ++ +D I ++G+I +R+ + + + R+ DAD
Sbjct: 171 ISTQDNAQSVLGAVDKMIAGVDRKRAELGAIQNRMESTIRNQANIAENLSSARSRVRDAD 230
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A E+ L+ QQ A L+ N LSL R
Sbjct: 231 FAVETATLTQYNILQQAASTVLAQANQRPNGALSLLR 267
>gi|170737015|ref|YP_001778275.1| flagellin domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169819203|gb|ACA93785.1| flagellin domain protein [Burkholderia cenocepacia MC0-3]
Length = 303
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN +AM+ + + + +L R+ +GLR++ A D+AA IA +++ +
Sbjct: 1 MLSLHTNAAAMNIKKAIGSTSNSLNTTMTRLGTGLRINSAKDDAAGLQIAVRLQAQTRGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
SS + A M + +++ +K+ T + + ++Q+E L
Sbjct: 61 GMAMQNTQNASSMLQTADGAMKEVTNILYRMKDLATQAADGSSSANEKTAMQAEYDALGK 120
Query: 118 QLRDIARGSSFNGENW 133
+L +I + +++ G
Sbjct: 121 ELSNIMKNTTYGGAKL 136
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ I+ + A IG+ +R+ + + M GR++DADMAS
Sbjct: 210 TDNANATIDLINNVLDDVGALRSAIGAAENRLAHTHNNLANMSTNTADAEGRIMDADMAS 269
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ES ++S+ Q Q ++ L ++ +LSL +
Sbjct: 270 ESAKMSSQQVLLQASMSMLKQTSSMNQMVLSLLQ 303
>gi|218675470|ref|ZP_03525139.1| flagellin C protein [Rhizobium etli GR56]
Length = 302
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 86/226 (38%), Positives = 118/226 (52%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN++AM+A Q LR IN L+ Q VSSG RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNNAAMAALQTLRGINQGLQETQAHVSSGYRVGKASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A A M AIDV+ IK K+ A E G D +Q EI+QLQ+QL
Sbjct: 61 SAVSDALGLGAAKVDTAYAAMDSAIDVVGNIKAKLVAATENGVDKAKVQEEISQLQAQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ +SF+GENW+ G+ + GS + + + + +
Sbjct: 121 SIAQSASFSGENWVAGANGTKSVVSTFVRDGSNAVSVKMTDYVLSNTSMGNVLFGMSGGA 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + + + + ++ T K T
Sbjct: 181 VETSTGILGTSTGATGSIYSMSITTFTLGQIQSALTNVESALKAMT 226
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/114 (42%), Positives = 78/114 (68%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ + ++ + ++ ++ +++ +K T+A +GS+S+RI LQEDF+
Sbjct: 189 GTSTGATGSIYSMSITTFTLGQIQSALTNVESALKAMTSAGAALGSVSTRIGLQEDFVNA 248
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ D+++ GVGRLVDA+M ES++LSALQTQQQLA+Q+LSI N+S+ ILSLFRG
Sbjct: 249 LSDSIDSGVGRLVDANMEEESSKLSALQTQQQLAIQSLSIANSSSQNILSLFRG 302
>gi|157101691|gb|ABV23557.1| flagellin A [Bacillus thuringiensis serovar kurstaki]
Length = 281
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 68 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEID 127
Query: 121 DIARGSSFNGENWLRTDLG 139
IA ++FNG +L G
Sbjct: 128 HIADKTNFNGNAFLGGAGG 146
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 35/84 (41%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+DT I+ A GS +R+ + + + ++ DADMA E + ++ +
Sbjct: 198 LDTAIQEIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKI 257
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
+ + LS N + + L +
Sbjct: 258 LNEAGISMLSQANRTPQMVSKLLQ 281
>gi|220927559|ref|YP_002504468.1| flagellin domain protein [Clostridium cellulolyticum H10]
gi|219997887|gb|ACL74488.1| flagellin domain protein [Clostridium cellulolyticum H10]
Length = 273
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 36/100 (36%)
Query: 352 TDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ + A + ++ I +A G+ +R+ + + + + R+
Sbjct: 174 YKGWADSAAASGAIDAVEGLINNVSAMRSYFGANQNRLEYNINNLDTYSENLSASESRIR 233
Query: 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D DMA+E + Q A L+ N +L L R
Sbjct: 234 DVDMANEMMEFTKQNILSQAAQSMLAQANQQPQGVLQLLR 273
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 43/265 (16%), Positives = 92/265 (34%), Gaps = 4/265 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+ ++L + +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNIAAMNTYRQLTNNTTASSKSLEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI----QSEITQLQSQL 119
S G S + + ++ +++ +K D+ + + EIT+L +Q+
Sbjct: 63 SRNSQDGISMIQTGEGALATVSNILVRVKELAVQAANGTYDATNDLTRIKEEITELSAQI 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
DI + FNG + L G + ++ I ++ L +
Sbjct: 123 ADITTNTKFNGISLLNNAAGITLQVGQETSQTLKIDTTKTNLKTVADAVDLYKGWADSAA 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ + L N + + ++ + + + AN
Sbjct: 183 ASGAIDAVEGLINNVSAMRSYFGANQNRLEYNINNLDTYSENLSASESRIRDVDMANEMM 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSG 264
+ K A G
Sbjct: 243 EFTKQNILSQAAQSMLAQANQQPQG 267
>gi|153940355|ref|YP_001391966.1| flagellin [Clostridium botulinum F str. Langeland]
gi|152936251|gb|ABS41749.1| flagellin [Clostridium botulinum F str. Langeland]
Length = 289
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 64/172 (37%), Gaps = 3/172 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N ++++A + + D+++SG +V + D+ + ++ K L
Sbjct: 8 LSHNLASLNAFRNYSKVLREQSTALDKITSGYKVRRSKDDPNVMAQSEKTKIQIRGLQVA 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ G+ +++ IK D + IQ+EI +L + +
Sbjct: 68 SRNAQDGVSMLQAAEGGLESIGNMLMRIKELTIQAANGTNDLDDKEVIQNEINELVAGIE 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
A+G+ FNG L S + + + I + +
Sbjct: 128 TTAKGTEFNGVKLLSQGNKFSDQTNVMTKSVPIGANVGDLEDIPFYNLTTEG 179
Score = 76.3 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/251 (10%), Positives = 71/251 (28%)
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++ V + + K A+ D + L +
Sbjct: 33 DKITSGYKVRRSKDDPNVMAQSEKTKIQIRGLQVASRNAQDGVSMLQAAEGGLESIGNML 92
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + N + A + + +++ +
Sbjct: 93 MRIKELTIQAANGTNDLDDKEVIQNEINELVAGIETTAKGTEFNGVKLLSQGNKFSDQTN 152
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ ++ ++ D + +T + + E + ++ I+ +
Sbjct: 153 VMTKSVPIGANVGDLEDIPFYNLTTEGLDIKGKINVTDASKLGESLDAVNNAIETVLSVR 212
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+ GS+ +R + + + +E LVDAD+A E + Q ++ +
Sbjct: 213 SEYGSLENRFEECMNNVGEISLKMEGANSELVDADVAEEMMIYAKSDILYQSSLAIMRQT 272
Query: 440 NNSTARILSLF 450
NN +L +
Sbjct: 273 NNFPMDVLKIL 283
>gi|187778744|ref|ZP_02995217.1| hypothetical protein CLOSPO_02339 [Clostridium sporogenes ATCC
15579]
gi|187772369|gb|EDU36171.1| hypothetical protein CLOSPO_02339 [Clostridium sporogenes ATCC
15579]
Length = 289
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 64/172 (37%), Gaps = 3/172 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N ++++A + + D+++SG +V + D+ + ++ K L
Sbjct: 8 LSHNLASLNAFRNYSKVLTEQSTALDKITSGYKVRRSKDDPNVMAQSEKTKIQIRGLQVA 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
S G S + A+ G+ +++ IK + + IQ+EI +L + +
Sbjct: 68 SRNAQDGVSMLQTAEGGLESIGNMLMRIKELTIQAANGTNNLDDKEVIQNEINELMAGIE 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
A+G+ FNG L S + + + I + +
Sbjct: 128 TTAKGTEFNGVKLLSKGNKFSNQTDVMTKSVPIGANVGDLEDIPFYNLTTEG 179
Score = 76.7 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/251 (11%), Positives = 72/251 (28%)
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++ V + + K A+ D + T L +
Sbjct: 33 DKITSGYKVRRSKDDPNVMAQSEKTKIQIRGLQVASRNAQDGVSMLQTAEGGLESIGNML 92
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + N + A + + ++K D
Sbjct: 93 MRIKELTIQAANGTNNLDDKEVIQNEINELMAGIETTAKGTEFNGVKLLSKGNKFSNQTD 152
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ ++ ++ D + +T + + E + ++ I+ +
Sbjct: 153 VMTKSVPIGANVGDLEDIPFYNLTTEGLDIKGKIDVTDTSKLGESLDAVNNAIETVLSVR 212
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+ GS+ +R + I + +E LVDAD+A + + Q ++ +
Sbjct: 213 SEYGSLENRFEECMNNIGEISLKMEGANSELVDADVAEQMMNYAKSDILYQSSLAIMRQT 272
Query: 440 NNSTARILSLF 450
NN +L +
Sbjct: 273 NNFPMDVLKIL 283
>gi|14861502|gb|AAK73701.1| flagellin A [Campylobacter jejuni]
gi|14861508|gb|AAK73704.1| flagellin A [Campylobacter jejuni]
gi|14861510|gb|AAK73705.1| flagellin A [Campylobacter jejuni]
Length = 554
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 90/273 (32%), Gaps = 3/273 (1%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 1 ALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAISNGND 60
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGS 126
+ A M + + ++ TIK K T + G +Q++I +L +L +IA +
Sbjct: 61 ALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTT 120
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
SFNG+ L + + I S + + + S
Sbjct: 121 SFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSGEVQFTL 180
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+ + + + + + I+ K + ++ +A +
Sbjct: 181 KNYNGIDDFQFQKVVISTSVGTGLGALADEINKNADKTGVRATFTVETRGMAAVRAGTTS 240
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
G + + S
Sbjct: 241 DDFTINGVKIGKVEYKDGDANGALVAAINSVKD 273
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 33/89 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + I + + V+ ++ D D
Sbjct: 466 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVD 525
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNST 443
A+ES S Q A++ N+
Sbjct: 526 FAAESANYSKANILAQSGSYAMAQANSVQ 554
>gi|92399066|gb|ABE76297.1| flagellin [Pseudomonas aeruginosa]
Length = 397
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/396 (10%), Positives = 106/396 (26%), Gaps = 36/396 (9%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRD 121
G S A+ + ++ +++ I++ D ++Q E+ Q++L
Sbjct: 2 RNANDGISLAQTAEGALQQSTNILQRIRDLALQSANGSNSDADRAALQKEVAAQQAELTR 61
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I+ ++F G L G+++ + + + Y + +S
Sbjct: 62 ISDTTTFGGRKLLDGSFGTTSFQVGSNAYETIDISLQNASASAIGSYQVGSNGAGTVASV 121
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
GT + V +K+I ++ D++ I+ K A +
Sbjct: 122 AGTATASGIASGTVNLVGGGQVKNIAIAAGDSAKAIAEKMDGAIPNLSARARTVFTADVS 181
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
++ + + TS S + + I + + +
Sbjct: 182 GVTGGSLNFDVTVGSNTVSLAGVTSTQDLADQLNSNSSKLGITASINDKGVLTITSATGE 241
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDL------------------------------ 331
+ +
Sbjct: 242 NVKFGAQTGTATAGQVAVKVQGSDGKFEAAAKNVVAAGTAATTTIVTGYVQLNSPTAYSV 301
Query: 332 ---PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ + + + + + ++ +D + A +G++ +R
Sbjct: 302 SGTGTQASQVFGNASAAQKSSVASVDISTADGAQNAIAVVDNALAAIDAQRADLGAVQNR 361
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
D + + + R+ D D A+E+ LS
Sbjct: 362 FKNTIDNLTNISENATNARSRIKDTDFAAETAALSK 397
>gi|87242426|gb|ABD33752.1| flagellin [Bacillus thuringiensis serovar wratislaviensis]
Length = 346
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 66/185 (35%), Gaps = 3/185 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGISLIRTTDSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++ E + L+ Q+ I++ + FN + L
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTDKNQAALDKEFSALKEQIDYISKNTEFNDKKLLDGSN 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
S S S N TT + S+ K
Sbjct: 121 KSIAIQTLDSFDKSKQIQINLADTSTTALKIANLTIADAGSTAGSGTALTGAVAADITKA 180
Query: 199 EPQVL 203
+
Sbjct: 181 GTEAG 185
>gi|218887611|ref|YP_002436932.1| flagellar hook-associated protein 3 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758565|gb|ACL09464.1| flagellar hook-associated protein 3 [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 507
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/486 (10%), Positives = 124/486 (25%), Gaps = 61/486 (12%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+ NL + SS +V+ +D+ + ++ +G S +
Sbjct: 17 NMNYALSNLMESNMQASSQKQVNRPSDDPVGMARILNYRASLATNEQYQKNVGQAESWLS 76
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGS------ 126
+A +++ V++ IK + K I E+ +L QL ++A
Sbjct: 77 LADKTLTQVSTVLTRIKALAEQAATGTVSPENRKEISYEMRELYGQLINLANTENEGRHI 136
Query: 127 -----------------SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
+ N T + V G +
Sbjct: 137 FAGHKIESAAYVAGLAVTANDPALSNTSFTVDGGASNTIVFQFLESGTIGTDALDYRYSE 196
Query: 170 LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
T + L + V + ++A A G
Sbjct: 197 DGGTTWKTGTLASNAAPVMLGGARLTMSPGAAVTAVDTGNDHEAGNGTWLYIRPTAIYKG 256
Query: 230 AWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS---- 285
+ ++ T ++ + SG+ S +++ S + +
Sbjct: 257 DDMNSSGLTAERYGAANIAATADGSFSRDVMVRIDQSGTLSGAISYSYSMDGGSSWVPAT 316
Query: 286 ----------------------------DIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ + + + V N
Sbjct: 317 ASGTGGPVSLLVPGGFLTLASNGGNALAAGDQFVIRPHRASLEYEISPGEYMSVNNVGKD 376
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
+ + + + R N + +++ + + T K
Sbjct: 377 IFGGLYQAPGQSSPTAVYGGDGRNLFEVMGRLIAFTETNSQTGIQQALDELGTASKVILT 436
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL---AVQ 434
AA ++G +R+ + + ++ D + + D D+A T+L+ Q +
Sbjct: 437 AAARVGGKENRLDVVQGILESQEDDQTMRMSSIEDVDVAKLMTQLAQQQLTYNSVLKSSS 496
Query: 435 ALSIVN 440
+ +N
Sbjct: 497 MIMQMN 502
>gi|222147582|ref|YP_002548539.1| flaB [Agrobacterium vitis S4]
gi|221734570|gb|ACM35533.1| flaB [Agrobacterium vitis S4]
Length = 320
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 75/144 (52%), Positives = 99/144 (68%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI+TN SAM+A Q LR I+ N+E Q+R+SSG +V A DNAAYWSIA M+SDN AL
Sbjct: 1 MTSIMTNTSAMAALQTLRGIDQNMETTQNRISSGYKVDSAKDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S V DA+GL +SK D A G+ +IDV+S+IK+K+ A E G D I EI +L++QL
Sbjct: 61 STVQDALGLAASKADTAYTGLDSSIDVLSSIKSKLVAAREPGVDKDKINQEINELKNQLA 120
Query: 121 DIARGSSFNGENWLRTDLGSSTAS 144
IA +SF+GENWL + + +
Sbjct: 121 SIAESASFSGENWLYNESTNPPTT 144
Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/97 (48%), Positives = 67/97 (69%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ M+S +D ++ T +A +G+ISSRI Q+ F+K + D ++KGVGRLVDAD
Sbjct: 224 DMSNDDLDGMISAVDKMLQDLTDSASTLGAISSRIDSQDTFVKNLSDTIDKGVGRLVDAD 283
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
M EST++ ALQTQQQL +QALSI N + IL+LF+
Sbjct: 284 MNEESTKIKALQTQQQLGIQALSIANTNAENILTLFK 320
>gi|315927501|gb|EFV06837.1| flagellin A [Campylobacter jejuni subsp. jejuni DFVF1099]
Length = 378
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + I + + V+ ++ D D
Sbjct: 282 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVD 341
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A++ N+ +L L +
Sbjct: 342 FAAESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ 378
>gi|323493110|ref|ZP_08098241.1| hypothetical protein VIBR0546_21555 [Vibrio brasiliensis LMG 20546]
gi|323312581|gb|EGA65714.1| hypothetical protein VIBR0546_21555 [Vibrio brasiliensis LMG 20546]
Length = 275
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/269 (13%), Positives = 91/269 (33%), Gaps = 3/269 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN++++ L N L +R+S+GLR++ AAD+AA +IA +++ +S
Sbjct: 3 LSMHTNYASLVTQNTLSSTNDLLTTAMERLSTGLRINSAADDAAGLTIANKLEAQTRGMS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
S + A + + ++ +K+ T G T+ ++ +E +L+ +
Sbjct: 63 VAMRNSQDAISMLQTADGALEELTNIAYRMKDLATQGANGTNGATELAALDAEYQELEQE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
I +++ L T + A + + + T+ +
Sbjct: 123 AIRIMGETTYGAGQKLLTGGKLAAAVDFQIGASGAEKLTVDVSTELGNIDFTTTATLDTN 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++++ + V + +I+ + + + + A
Sbjct: 183 ANSNAEIAKVDALFDQINTVRSALGANINRLDHTINNLANISENTAAAKGRITDADFAIE 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
+ + N G +
Sbjct: 243 SSNMTKNQMLMQAGTTVLSQTNQLPGMAM 271
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 52/199 (26%)
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A A T+ K + + + + +T
Sbjct: 77 TADGALEELTNIAYRMKDLATQGANGTNGATELAALDAEYQELEQEAIRIMGETTYGAGQ 136
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ E + L T + ++ +D
Sbjct: 137 KLLTGGKLAAAVDFQIGASGAEKLTVDVSTELGNIDFTTTATLDTNANSNAEIAKVDALF 196
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+G+ +R+ + + + + GR+ DAD A ES+ ++ Q Q
Sbjct: 197 DQINTVRSALGANINRLDHTINNLANISENTAAAKGRITDADFAIESSNMTKNQMLMQAG 256
Query: 433 VQALSIVNNSTARILSLFR 451
LS N +SL R
Sbjct: 257 TTVLSQTNQLPGMAMSLLR 275
>gi|196033430|ref|ZP_03100842.1| flagellin [Bacillus cereus W]
gi|195993864|gb|EDX57820.1| flagellin [Bacillus cereus W]
Length = 273
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 3 INTNINSMRTQEYMRQNQDKMNTAMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + + + +++ +++ T TD S+ E QL++++
Sbjct: 63 ARNTQDAMSALRTGDSALQSMSNILLRMRDLATQASSGTNGATDVASVGKEYAQLKAEID 122
Query: 121 DIARGSSFNGENWLRTDLG 139
IA ++FNG+ +L G
Sbjct: 123 HIAERTNFNGKAFLNAAAG 141
Score = 79.8 bits (194), Expect = 8e-13, Method: Composition-based stats.
Identities = 26/199 (13%), Positives = 61/199 (30%)
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A + ++ + + AS+ + + + D +
Sbjct: 75 TGDSALQSMSNILLRMRDLATQASSGTNGATDVASVGKEYAQLKAEIDHIAERTNFNGKA 134
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ E+ D + S+ T +T D + + +D I
Sbjct: 135 FLNAAAGGEADISVQLSDASGDTLVIQSLNTKELTTETLGDDISTNELAAAELEPLDAAI 194
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A GS +R+ + + + ++ DADMA E + ++ + +
Sbjct: 195 QAIADARATFGSQLNRLDHNLNNVTSQATNMAAAASQIEDADMAKEMSEMTKFKILNEAG 254
Query: 433 VQALSIVNNSTARILSLFR 451
+ LS N + + L +
Sbjct: 255 ISMLSQANQTPQMVSKLLQ 273
>gi|87242498|gb|ABD33788.1| flagellin [Bacillus weihenstephanensis]
Length = 326
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + M
Sbjct: 1 AKMSNSMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGISLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++ E L+ Q+ I+ + FN + L
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTNENQAALNKEFDALKEQIDYISTNTEFNDKKLLDGSN 120
Query: 139 GSSTASI 145
+
Sbjct: 121 KTIAVQT 127
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 34/70 (48%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ IDT +K + +G+ +R+ + +K + ++ ++ DADMA E + ++
Sbjct: 257 AIASIDTALKNIASNRATLGATLNRLDFNVNNLKSQQSSMASAASQVEDADMAKEMSEMT 316
Query: 424 ALQTQQQLAV 433
+ + +
Sbjct: 317 KFKILNEAGI 326
>gi|91204570|emb|CAJ70798.1| similar to endoflagellar core protein [Candidatus Kuenenia
stuttgartiensis]
Length = 298
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 91/209 (43%), Gaps = 3/209 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I TN +A++A + L DIN L V Q R+++G R+++AAD+AA ++IA+ + + L
Sbjct: 1 MSRINTNINALNALRSLNDINTQLSVSQLRLATGKRINNAADDAAGFTIAKKFNARSQGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQS 117
IG + + +A+ ++ +D+++ +K K T + + +IQSE+ L +
Sbjct: 61 GQALANIGSAKNLMSVAEGHLNNILDILTQMKTKATQAADDSLGSAERNAIQSELKALAT 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ S++N ++ T ++ A+ + + + D
Sbjct: 121 QIDLEVTQSTWNSKSIFGTGNSTTGAASSVQFKFQIGAGASSTNDVLKFDLLAKDNVSFD 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDI 206
+T+ + +
Sbjct: 181 GGNTNYKSDGLRVSVATAGRAVTSSASAQ 209
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 71/209 (33%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + + + S K+ + + + + T ++ +
Sbjct: 89 TQMKTKATQAADDSLGSAERNAIQSELKALATQIDLEVTQSTWNSKSIFGTGNSTTGAAS 148
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
G + + L ++ Y L ++ A +
Sbjct: 149 SVQFKFQIGAGASSTNDVLKFDLLAKDNVSFDGGNTNYKSDGLRVSVATAGRAVTSSASA 208
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ ++S IDT I + IG++ +R+ QE + + R E R+ DADMA E +
Sbjct: 209 QALMSNIDTAIADVSEGLSYIGAVVNRLTYQETSLTVARTNTEAARSRIEDADMAYEQLQ 268
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
+ LQ QQ A L+ N IL LF
Sbjct: 269 STKLQILQQTASAMLAQANAGPQSILQLF 297
>gi|330826762|ref|YP_004390065.1| flagellar hook-associated protein 3 [Alicycliphilus denitrificans
K601]
gi|329312134|gb|AEB86549.1| flagellar hook-associated protein 3 [Alicycliphilus denitrificans
K601]
Length = 416
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 60/450 (13%), Positives = 122/450 (27%), Gaps = 47/450 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + + + L +L +Q+ ++SG RV A+D+ + A+ + +
Sbjct: 7 VSTANMHDATLRNLNARQKSLVDLQENLTSGKRVVRASDDPVAAAQAERALTRISRIQTE 66
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
A+ + + + A++ + AI ++ I+ + A D K+ +I L+ QL
Sbjct: 67 QRALEVQRNAIAQAESTLGDAIGLVQEIRQLVVAAGGGALKPEDRKTYADQIQSLREQLT 126
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
D+ NG L + Q ++ + +
Sbjct: 127 DVINRKDTNGIPLLGALGSALQPFAGPLSGSPDYLFAGLPGQASSSGTAIATTLDGHSAL 186
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
R G+ + L ++ D + T G T
Sbjct: 187 MFDPRRDGVYQAGVSTIPADRSLTTSAITAVDRNQITGDGYRIDFTAVGPGATPGTTTAT 246
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
T V + + V I
Sbjct: 247 YTITNTTTGVTSAPVTVPDFASDKPATIAVTGVPGMTFSI-------------------- 286
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + L ++ + + A
Sbjct: 287 -------------------SGTPAAGDAVTLQPSPSLMSTIDSAIEGIRGAANNNAATQA 327
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + ++ ID ++ G G + +R +E R D DM +
Sbjct: 328 VGQALANIDAGMERLNNMRGYAGELLNRADRITGDQSQRSIQLEADRSRAEDLDMVQGIS 387
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
Q Q A+Q+ ++V LSLF
Sbjct: 388 GFQNAQVGYQAALQSYAMVQK-----LSLF 412
>gi|242278413|ref|YP_002990542.1| flagellin [Desulfovibrio salexigens DSM 2638]
gi|242121307|gb|ACS79003.1| flagellin domain protein [Desulfovibrio salexigens DSM 2638]
Length = 285
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 74/204 (36%), Gaps = 3/204 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I N A + ++ L D L +++SSGLR++ AAD+AA ++ ++M+SD L
Sbjct: 3 LVINNNTVANATARHLNDAYSALSSSTEKMSSGLRINSAADDAAGLAVRELMRSDISTLQ 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
G S + A + + + +K I E + S+
Sbjct: 63 QGVRNANDGISMIQTADGALGVVDEKLIRMKELAEQAATGTYTSDQRALIDQEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA + FNG + L ++ A G+ +D ++I T
Sbjct: 123 ITRIASATDFNGIHLLNGNVSGDNAVTIHFGTGNDSAEDKYDIEIGTCTASALGIGNQSA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQV 202
+ T + ++ +
Sbjct: 183 ENAGYTVSTQEAAQASLEALDNAI 206
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 63/180 (35%)
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
S + + + + N V+ + T + + + + D
Sbjct: 105 TSDQRALIDQEYQAMASEITRIASATDFNGIHLLNGNVSGDNAVTIHFGTGNDSAEDKYD 164
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
+ + ++ N + + + A + + +D I +G++ +R+
Sbjct: 165 IEIGTCTASALGIGNQSAENAGYTVSTQEAAQASLEALDNAIISKDKIRANLGALENRLE 224
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+++ + ++ ++ D D+A+E T S Q Q AV L+ N+ LSL
Sbjct: 225 ATISNLEIQGENLQAAESQISDVDVATEMTNYSKQQIITQSAVSMLAQANSLPQMALSLI 284
>gi|157101698|gb|ABV23563.1| flagellin B [Bacillus thuringiensis serovar sumiyoshiensis]
gi|257793143|gb|ABV23566.2| flagellin B2 [Bacillus thuringiensis serovar fukuokaensis]
Length = 288
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 69/178 (38%), Gaps = 3/178 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D KS+ E L ++
Sbjct: 68 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIKSMNKEYQALAQEIN 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
IA ++FNG +L + D I T D V D
Sbjct: 128 HIADKTNFNGNAFLNKGTNPGEGKDITIQLSDASSDTMTIAAIETKKLTTDTLAVGPD 185
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 20/183 (10%), Positives = 51/183 (27%)
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + + + + + N + + D+
Sbjct: 106 TNNDKDIKSMNKEYQALAQEINHIADKTNFNGNAFLNKGTNPGEGKDITIQLSDASSDTM 165
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
E + + ++ +DT I+ A GS +R
Sbjct: 166 TIAAIETKKLTTDTLAVGPDPDDAVKNLTATTAAAEITALDTAIQNIADARATFGSQLNR 225
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + ++ DADMA E + ++ + + + LS N + +
Sbjct: 226 LDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKILNEAGISMLSQANQTPQMVSK 285
Query: 449 LFR 451
L +
Sbjct: 286 LLQ 288
>gi|110349477|gb|ABG73219.1| flagellin [Borrelia persica]
gi|110349479|gb|ABG73220.1| flagellin [Borrelia persica]
gi|110349481|gb|ABG73221.1| flagellin [Borrelia persica]
Length = 250
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 3/144 (2%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N SA++AS+ NL Q+++SSG R++ A+D+AA +A + + LS S
Sbjct: 1 NTSAINASRNNAINVANLSKTQEKLSSGYRINRASDDAAGMGVAGKINAQIRGLSQASRN 60
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIA 123
+ + + +++ V+ +K D SIQ EI QL ++ IA
Sbjct: 61 TSKAINFIQTTEGNLNEVEQVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIA 120
Query: 124 RGSSFNGENWLRTDLGSSTASIAK 147
+ +N L + A+
Sbjct: 121 DQAQYNQMRMLSNKSAADNVKTAE 144
>gi|87242420|gb|ABD33749.1| flagellin [Bacillus thuringiensis serovar oswaldocruzi]
Length = 342
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 63/133 (47%), Gaps = 3/133 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA MK+ G L+ S G S + A + +
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMKAREGGLNVASRNTQDGISLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++Q E + L+ Q+ I++ + FN + L +
Sbjct: 61 NSVSNILLRMRDLANQSATGTNTEKNQSALQKEFSALKDQIDYISKNTQFNDKALLSGEG 120
Query: 139 GSSTASIAKSVIG 151
+ +I +
Sbjct: 121 DTQVGNITIKIQT 133
Score = 73.6 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 21/164 (12%), Positives = 50/164 (30%)
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
S A T+ ++ T + + T +T +
Sbjct: 179 SAMNTAFGTFKNEFDATTDPGDRNTAVDTLKAAWNANKANFDAATITDFETALNDYTTTV 238
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRI 389
D + + K A + V ID ++ + +G+ +R+
Sbjct: 239 DKDAAYTAIKEGFAKLTPASTSGAPAAGKPAALDAVKQIDKALESIATSRADLGATLNRL 298
Query: 390 HLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+K +++ ++ DADMA E + ++ + + +
Sbjct: 299 DFNVTNLKSQENSMAASASQIEDADMAKEMSEMTKFKILNEAGI 342
>gi|30019805|ref|NP_831436.1| flagellin [Bacillus cereus ATCC 14579]
gi|29895350|gb|AAP08637.1| Flagellin [Bacillus cereus ATCC 14579]
Length = 249
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 3 INTNINSMRTQEYMRQNQDKMNTAMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D+ S+ E L+S++
Sbjct: 63 ARNTQDAMSALRTGDAALGSISNILLRMRDLATQASNGTNNTEDTASLNKEYEALKSEID 122
Query: 121 DIARGSSFNGENWLRTDLG 139
IA +SFNG +L TD G
Sbjct: 123 HIANKTSFNGIKFLSTDKG 141
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/185 (12%), Positives = 51/185 (27%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A+ L AA + S ++ + + +
Sbjct: 63 ARNTQDAMSALRTGDAALGSISNILLRMRDLATQASNGTNNTEDTASLNKEYEALKSEID 122
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
N T + + + + AN ++
Sbjct: 123 HIANKTSFNGIKFLSTDKGGAADIKVQLSDASGDTMTIDSLDAKKITTANLTTLADRGTA 182
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
E + +DT I+ A GS +R+ + + + ++ DADMA E +
Sbjct: 183 ETEIKALDTAIQELADARATFGSQLNRLDHNLNNVTSQATNMAAAASQIEDADMAKEMSE 242
Query: 422 LSALQ 426
++ +Q
Sbjct: 243 MTKVQ 247
>gi|229153657|ref|ZP_04281830.1| Flagellin [Bacillus cereus m1550]
gi|228629809|gb|EEK86464.1| Flagellin [Bacillus cereus m1550]
Length = 165
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
E + +D I+ GS +R+ + + + ++ DAD
Sbjct: 69 AAGTGDAAESIKELDAAIQKVADMRATFGSQLNRLDHNLNNVNSQATNMSAAASQIEDAD 128
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + ++ + + + LS N + + L +
Sbjct: 129 MAKEMSNMTKFKILNEAGISMLSQANQTPQMVSKLLQ 165
>gi|222084873|ref|YP_002543402.1| flagellin C protein [Agrobacterium radiobacter K84]
gi|221722321|gb|ACM25477.1| flagellin C protein [Agrobacterium radiobacter K84]
Length = 327
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 84/228 (36%), Positives = 125/228 (54%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI+TN+SAM+A Q L+ I+ NL+ Q+ VSSGLR+S A+DNAAYWSI+ MKSD+ AL
Sbjct: 27 MTSIITNNSAMAALQTLKGISSNLQDTQNAVSSGLRISKASDNAAYWSISTSMKSDDSAL 86
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AVSDA+GLG++KVD A ++ AIDV+ IK+K+ +E D ++Q EI QLQ+QL+
Sbjct: 87 GAVSDALGLGAAKVDTASTAVTSAIDVVGQIKDKLVTAMEGSVDKDAVQEEIGQLQAQLQ 146
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A+ +SFNGENW+ G S + ++ + G+ +S
Sbjct: 147 SVAQSASFNGENWVMAASGDSASVVSSFIRGTNGTVSVSTTSYAFDTGATGNVLFGSNSG 206
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
T T L + V + + ++ + T+
Sbjct: 207 TIDTASGILGTVSGSYSVFSLDISSMTTGQISSALDMVQTALNSLTSM 254
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 52/141 (36%), Positives = 74/141 (52%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
T + S V+ + + + + + + + T
Sbjct: 187 TSYAFDTGATGNVLFGSNSGTIDTASGILGTVSGSYSVFSLDISSMTTGQISSALDMVQT 246
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ T+ K+GSISSRI LQ F + D+++ GVG+LVDADM ES++LSALQTQQQ
Sbjct: 247 ALNSLTSMGSKLGSISSRIDLQTSFASSLSDSIQSGVGKLVDADMEEESSKLSALQTQQQ 306
Query: 431 LAVQALSIVNNSTARILSLFR 451
LA+Q+LSI N+ST ILSLFR
Sbjct: 307 LAIQSLSIANSSTQSILSLFR 327
>gi|229090722|ref|ZP_04221955.1| Flagellin [Bacillus cereus Rock3-42]
gi|228692664|gb|EEL46390.1| Flagellin [Bacillus cereus Rock3-42]
Length = 266
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 54/136 (39%), Gaps = 3/136 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A++N A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNHASNNPANIAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRT 136
I + FN +
Sbjct: 123 YIDETTEFNDLSVFDG 138
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 27/239 (11%), Positives = 68/239 (28%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T + +
Sbjct: 27 MEHLATGKKLNHASNNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNI 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + T T + + L
Sbjct: 87 LQRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIDETTEFNDLSVFDGQKRPVTLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + I+ ++ + +GS+ +R+
Sbjct: 147 DIGHTVNITKHIPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGSMMNRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 207 IENLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSKLLQ 265
>gi|226941621|ref|YP_002796695.1| hypothetical protein LHK_02705 [Laribacter hongkongensis HLHK9]
gi|226716548|gb|ACO75686.1| Flagellin domain protein [Laribacter hongkongensis HLHK9]
Length = 277
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 5/183 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN ++++A + L L R+SSGLRV+ A D+AA +IA M + S
Sbjct: 5 VNTNIASLNAQRNLNSSTNALSTSLQRLSSGLRVNSAKDDAAGLAIATGMTAQIRGGSQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE-----RGTDSKSIQSEITQLQSQ 118
G S A+ +S+ M ++ G + I++E+ QL ++
Sbjct: 65 IRNANDGISLAQTAEGALSQIESNMQRMRELAVQGANGTVSGNTNNMNQIKAELDQLGAE 124
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ + FNG T + + + + + T
Sbjct: 125 NARLIADTKFNGNTVFSTGGQQTMTFQVGANNTANDKIGITVGTAAFTNGAATSATFANA 184
Query: 179 SST 181
+
Sbjct: 185 TDA 187
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 46/137 (33%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
T + + A + + +++ +D+++
Sbjct: 141 STGGQQTMTFQVGANNTANDKIGITVGTAAFTNGAATSATFANATDAGSLIANLDSELNT 200
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ +G+ +R ++ + + GR+VD D A E+ ++ Q QQ
Sbjct: 201 VASMRANLGAAQNRFGAVVANLQTYVENLSASRGRIVDTDFAEETANMTRNQIIQQAGTA 260
Query: 435 ALSIVNNSTARILSLFR 451
L+ N + ++L R
Sbjct: 261 MLAQANQLPSAAMTLLR 277
>gi|14861504|gb|AAK73702.1| flagellin A [Campylobacter jejuni]
Length = 558
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/273 (16%), Positives = 91/273 (33%), Gaps = 3/273 (1%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 1 ALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAISNGND 60
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGS 126
+ A M + + ++ TIK K T + G +Q++I +L +L +IA +
Sbjct: 61 ALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTT 120
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
SFNG+ L + + I S + + + S
Sbjct: 121 SFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGGRISSSGEVQFTL 180
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+ + + + + + I+ K + ++ +A +
Sbjct: 181 KNYNGIDDFKFQKVVISTSVGTGLGALADEINKNADKTGVRATFTVETRGMAAVRAGTTS 240
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ G + S S
Sbjct: 241 DDFAINGVKIGKVDYKDGDANGALVSAINSVKD 273
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 34/89 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + + I + + V+ ++ D D
Sbjct: 470 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESQIRDVD 529
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNST 443
A+ES S Q A++ N+
Sbjct: 530 FAAESANYSKANILAQSGSYAMAQANSVQ 558
>gi|170722866|ref|YP_001750554.1| flagellin [Pseudomonas putida W619]
gi|169760869|gb|ACA74185.1| flagellin domain protein [Pseudomonas putida W619]
Length = 284
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/233 (14%), Positives = 80/233 (34%), Gaps = 4/233 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN +++ + L + L R+SSGLR++ A D+AA IA +++ +
Sbjct: 3 LTVNTNTTSLGVQKNLNKASDALSTSMTRLSSGLRINSAKDDAAGQQIANKLQTMVTGTT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G+S A+ +S+ +++ ++ T+ ++ E +
Sbjct: 63 VAIKNANDGNSITQTAEGALSEITNILQRMRELALQARNDSNGTTERAALNKEFAAKSDE 122
Query: 119 LRDIARGSSF-NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ IA ++F + L G+ + S I + + T+ +
Sbjct: 123 ITRIATSTTFGTSKQLLNGTAGTMEFQVGAMTGTSQILSVSMTSSFAASTLAVGTGTLAI 182
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
++D + I Q + + + L + +
Sbjct: 183 SGTSDSAVHTSVDAAITAIDAALQTVDTKKSDLGAIQNRFQSTINNLQSMNEN 235
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
++ +G+I +R + ++ M + +GR+ D D A+E+ +L+ QT QQ
Sbjct: 205 LQTVDTKKSDLGAIQNRFQSTINNLQSMNENSAAAMGRVQDTDFAAETAQLTKQQTLQQA 264
Query: 432 AVQALSIVNNSTARILSLFR 451
+ L+ N + +L L +
Sbjct: 265 STSVLAQANQLPSAVLKLLQ 284
>gi|14861506|gb|AAK73703.1| flagellin A [Campylobacter jejuni]
Length = 556
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 75/202 (37%), Gaps = 3/202 (1%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 1 ALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAISNGND 60
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGS 126
+ A M + + ++ TIK K T + G +Q++I +L +L +IA +
Sbjct: 61 ALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTT 120
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
SFNG+ L + + I S + + + S
Sbjct: 121 SFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGGRISSSGEVQFTL 180
Query: 187 YGLLDRNHKIKVEPQVLKDIDV 208
+ + + +
Sbjct: 181 KNYNGIDDFKFQKVVISTSVGT 202
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 33/89 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ +++ + I + + V+ ++ D D
Sbjct: 468 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVD 527
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNST 443
A+ES S Q A++ N+
Sbjct: 528 FAAESANYSKAHILAQSGSYAMAQANSVQ 556
>gi|206974944|ref|ZP_03235859.1| A-type flagellin [Bacillus cereus H3081.97]
gi|206746963|gb|EDZ58355.1| A-type flagellin [Bacillus cereus H3081.97]
Length = 266
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 57/169 (33%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++A Q L + + V + +++G +++ A+DN +I M + +
Sbjct: 3 IGTNVLSLNARQSLYENEKRMNVTMEHLATGKKLNHASDNPVNVAIVTRMHARASGMCVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +V+ +++ + S+ +E L Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVTNVLQRMRDVAVQSANGTNSNQNRDSLNTEFQSLTEQIS 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T + Q
Sbjct: 123 YIGETTDFNDLSVFDGQNRPVTLDDIGHTVNVTKHISPSPTQHDINIST 171
Score = 92.9 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 25/243 (10%), Positives = 70/243 (28%)
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+ KK A+ + + +A G+ A + T +
Sbjct: 23 MNVTMEHLATGKKLNHASDNPVNVAIVTRMHARASGMCVAIRNNEDAISMLRTAEAALQT 82
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + + + T T T + + +
Sbjct: 83 VTNVLQRMRDVAVQSANGTNSNQNRDSLNTEFQSLTEQISYIGETTDFNDLSVFDGQNRP 142
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
L + ++ + + + + + ++ ++ + +G++ +R
Sbjct: 143 VTLDDIGHTVNVTKHISPSPTQHDINISTEQEARAAIRKMEEALQNVSLHRADLGAMINR 202
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + A+ R+ DADMA E + + ++A+ +S N +
Sbjct: 203 LQFNIENLNSQSTALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSK 262
Query: 449 LFR 451
L +
Sbjct: 263 LLQ 265
>gi|114054870|gb|ABI50035.1| FlaA [Clostridium botulinum]
Length = 237
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 62/165 (37%), Gaps = 3/165 (1%)
Query: 33 SGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIK 92
SGLR++ A D AA +I++ M+ L S S + A+ +++ ++ ++
Sbjct: 1 SGLRINRAGDXAAGLAISEKMRGQIRGLDQASRNSQDSISLIQTAEGALTETHSILQRMR 60
Query: 93 NKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSV 149
G D ++I++EIT+L +++ I++ + FN + L I +
Sbjct: 61 ELAVQGTNDTNVTADREAIKTEITELNNEINRISQQTEFNTQKLLSGGFKDKNFQIGANK 120
Query: 150 IGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+ T + + + T L +
Sbjct: 121 AQTIKLSIGDMSAKTLGVSGVSVSDATXATDSIXTIDTALGKVST 165
Score = 80.2 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 39/111 (35%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + ++ + + IDT + + K+G+ +R+ + +
Sbjct: 127 SIGDMSAKTLGVSGVSVSDATXATDSIXTIDTALGKVSTERAKLGAXQNRLXHTINNLNT 186
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
+ ++ R+ DMA E S Q A + N + +L L
Sbjct: 187 SSENLQAAESRVRXVDMAKEMMAFSKNNILNQAAQAMXAQANQAPQGVLQL 237
>gi|15887891|ref|NP_353572.1| flagella associated protein [Agrobacterium tumefaciens str. C58]
gi|1865673|emb|CAA65300.1| flaA [Agrobacterium tumefaciens str. C58]
gi|2459721|gb|AAB71797.1| FlaA [Agrobacterium tumefaciens]
gi|15155481|gb|AAK86357.1| flagella associated protein [Agrobacterium tumefaciens str. C58]
Length = 306
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 77/231 (33%), Positives = 112/231 (48%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SILTN++AM+A LR I +L QDR+SSGL+V A+DNAAYWSIA M+SDN AL
Sbjct: 1 MASILTNNNAMAALSTLRSIASDLSTTQDRISSGLKVGSASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AVSDA+G+G++KVD A AGM AI V++ IK K+ A E+G D +Q E++QL QL+
Sbjct: 61 GAVSDALGMGAAKVDTASAGMDAAIKVVTDIKAKVVAAKEQGVDKTKVQEEVSQLLDQLK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I +SFNGENWL + ++ ++ V + + +
Sbjct: 121 SIGTSASFNGENWLVSSANATKTVVSGFVRDAGGTVSVKTTDYALDANSMLYTEGTPGTI 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ + + + + +
Sbjct: 181 DANSGILNATGATTTVGAKTYTQISVLDMNVGTDDLDNALYSVETALTKMT 231
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 50/94 (53%), Positives = 66/94 (70%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
++ + ++T + T+A K+GS+S+RI LQ F + D +EKGVGRLVDADM
Sbjct: 213 TDDLDNALYSVETALTKMTSAGAKLGSLSARIDLQSGFADKLSDTIEKGVGRLVDADMNE 272
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
EST+L ALQTQQQLA+QALSI N+ + ILSLFR
Sbjct: 273 ESTKLKALQTQQQLAIQALSIANSDSQNILSLFR 306
>gi|146335620|gb|ABQ23418.1| flagellin [Pseudomonas syringae pv. syringae]
gi|330953738|gb|EGH53998.1| flagellin [Pseudomonas syringae Cit 7]
Length = 282
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 79/221 (35%), Gaps = 3/221 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA +IA + S +
Sbjct: 3 LTVNTNVASLNVQKNLGRASDALSTSMTRLSSGLKINSAKDDAAGLNIATKINSQIKGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ + ++ +++ ++ TD ++ E TQ+ S+
Sbjct: 63 MAIKNANDGMSIAQTAEGALQESTNILQRMRELAVQSRNDSNSATDRVALNKEFTQMSSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA ++ NG+N + + T + + + + ++
Sbjct: 123 LTRIANSTNLNGKNLIDGSASTMTFQVGSNSGSANQITLTLSASFDANTLGVGSAITIVG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
S + E + + ST
Sbjct: 183 SDSAAAETNFSAAMAAIDSALQTINNTRSDLGAAQNRLTST 223
Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 56/138 (40%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + S + + ++ + +D+ + ++ ID+ ++
Sbjct: 145 MTFQVGSNSGSANQITLTLSASFDANTLGVGSAITIVGSDSAAAETNFSAAMAAIDSALQ 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ ++ + + +GR+ D D A+E+ +L+ QT QQ +
Sbjct: 205 TINNTRSDLGAAQNRLTSTISNLQNINENASAALGRIQDTDFAAETAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 SVLAQANQLPSAVLKLLQ 282
>gi|168180909|ref|ZP_02615573.1| flagellin [Clostridium botulinum NCTC 2916]
gi|182668365|gb|EDT80344.1| flagellin [Clostridium botulinum NCTC 2916]
Length = 284
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 64/172 (37%), Gaps = 3/172 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N ++++A + + D+++SG +V + D+ + ++ K L
Sbjct: 3 LSHNLASLNAFRNYSKVLREQSTALDKITSGYKVRRSKDDPNVMAQSEKTKIQIRGLQVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
S G S + A+ G+ +++ IK D + IQ+EI +L + +
Sbjct: 63 SRNAQDGVSMLQAAEGGLESIGNMLMRIKELTIQAANGTNDLNDKEVIQNEINELVAGIE 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
A+G+ FNG L S + + + I + +
Sbjct: 123 TTAKGTEFNGVKLLSQGNKFSDQTNVMTKSVPIGANVGDLENIPFYNLTTEG 174
Score = 75.9 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/251 (9%), Positives = 71/251 (28%)
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++ V + + K A+ D + L +
Sbjct: 28 DKITSGYKVRRSKDDPNVMAQSEKTKIQIRGLQVASRNAQDGVSMLQAAEGGLESIGNML 87
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + N + A + + +++ +
Sbjct: 88 MRIKELTIQAANGTNDLNDKEVIQNEINELVAGIETTAKGTEFNGVKLLSQGNKFSDQTN 147
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ ++ ++ + + +T + + E + ++ I+ +
Sbjct: 148 VMTKSVPIGANVGDLENIPFYNLTTEGLDIKGKINVTDASKLGESLDAVNNAIETVLSVR 207
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+ GS+ +R + + + +E LVDAD+A E + Q ++ +
Sbjct: 208 SEYGSLENRFEECMNNVGEISLKMEGANSELVDADVAEEMMIYAKSDILYQSSLAIMRQT 267
Query: 440 NNSTARILSLF 450
NN +L +
Sbjct: 268 NNFPMDVLKIL 278
>gi|40645054|dbj|BAD06421.1| flagellin [Pseudomonas syringae pv. pisi]
Length = 282
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 79/221 (35%), Gaps = 3/221 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA +IA + S +
Sbjct: 3 LTVNTNVASLNVQKNLGRASDALSTSMTRLSSGLKINSAKDDAAGLNIATKINSQIKGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ + ++ +++ ++ TD ++ E TQ+ S+
Sbjct: 63 MAIKNANDGMSIAQTAEGALQESTNILQRMRELAVQSRNDSNSATDRVALNKEFTQMSSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA ++ NG+N + + T + + S + ++
Sbjct: 123 LTRIANSTNLNGKNLIDGSASTMTFQVGSNSGASNQITLTLSASFDANTLGVGSAITIVG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
S + E + + ST
Sbjct: 183 SDSAAAETNFSAAMAAIDSALQTINNTRSDLGAAQNRLTST 223
Score = 77.9 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 55/138 (39%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + S + ++ + +D+ + ++ ID+ ++
Sbjct: 145 MTFQVGSNSGASNQITLTLSASFDANTLGVGSAITIVGSDSAAAETNFSAAMAAIDSALQ 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ ++ + + +GR+ D D A+E+ +L+ QT QQ +
Sbjct: 205 TINNTRSDLGAAQNRLTSTISNLQNINENASAALGRIQDTDFAAEAAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 SVLAQANQLPSAVLKLLQ 282
>gi|15964425|ref|NP_384778.1| flagellin protein [Sinorhizobium meliloti 1021]
gi|307311567|ref|ZP_07591208.1| flagellin domain protein [Sinorhizobium meliloti BL225C]
gi|17366554|sp|Q52943|FLAC_RHIME RecName: Full=Flagellin C
gi|15073602|emb|CAC45244.1| Flagellin C [Sinorhizobium meliloti 1021]
gi|306899584|gb|EFN30213.1| flagellin domain protein [Sinorhizobium meliloti BL225C]
Length = 321
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 82/205 (40%), Positives = 109/205 (53%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI+TN +AM+A Q LR IN+NLE Q R+SSG RV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSIMTNPAAMAALQTLRAINHNLETTQGRISSGYRVETAADNAAYWSIATTMRSDNAAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S V DA+GLG++KVD + M IDVM+ IK K+ A E G D I E+ +L+SQL
Sbjct: 61 STVHDALGLGAAKVDTFYSAMDTVIDVMTEIKAKLVAASEPGVDKDKINKEVAELKSQLN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A+ +SF+GENWL ++ + + + D + V D + D +
Sbjct: 121 SAAQSASFSGENWLYNGASAALGTKSIVASFNRSADGSVTVSTLNYDTAKSVLIDVTDPA 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ D
Sbjct: 181 RGMLTKAVNADALQSTPTGTARNYY 205
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 62/319 (19%), Positives = 115/319 (36%), Gaps = 2/319 (0%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ + +++ + ++ D ++T ++ L
Sbjct: 4 IMTNPAAMAALQTLRAINHNLETTQGRISSGYRVETAADNAAYWSIATTMRSDNAALSTV 63
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + + + ++ ++ K KL S + + A+ + +
Sbjct: 64 HDALGLGAAKVDTFYSAMDTVIDVMTEIKAKLVAASEPGVDKDKINKEVAELKSQLNSAA 123
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+A + S + + +T + A+
Sbjct: 124 QSASFSGENWLYNGASAALGTKSIVASFNRSADGSVTVSTLNYDTAKSVLIDVTDPARGM 183
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
T + + + D + +M+S +D I
Sbjct: 184 LTKAV--NADALQSTPTGTARNYYLIDAGAAPAGATEIEIDNATTGAQLGDMISVVDELI 241
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
T +A +G+I+SRI +QE F+ + D ++KGVGRLVDADM ESTRL ALQTQQQL
Sbjct: 242 SQLTDSAATLGAITSRIEMQESFVANLMDVIDKGVGRLVDADMNEESTRLKALQTQQQLG 301
Query: 433 VQALSIVNNSTARILSLFR 451
+Q+LSI N ++ IL LF+
Sbjct: 302 IQSLSIANTTSENILRLFQ 320
>gi|170759496|ref|YP_001787986.1| flagellin [Clostridium botulinum A3 str. Loch Maree]
gi|169406485|gb|ACA54896.1| flagellin [Clostridium botulinum A3 str. Loch Maree]
Length = 284
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 64/172 (37%), Gaps = 3/172 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N ++++A + + D+++SG +V + D+ + ++ K L
Sbjct: 3 LSHNLASLNAFRNYSKVLREQSTALDKITSGYKVRRSKDDPNVMAQSEKTKIQIRGLQVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
S G S + A+ G+ +++ IK D + IQ+EI +L + +
Sbjct: 63 SRNAQDGVSMLQAAEGGLESIGNMLMRIKELTIQAANGTNDLNDKEVIQNEINELVAGIE 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
A+G+ FNG L S + + + I + +
Sbjct: 123 TTAKGTEFNGVKLLSQGNKFSDQTNVMTKSVPIGANVGDLEDIPFYNLTTEG 174
Score = 75.5 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/251 (10%), Positives = 70/251 (27%)
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++ V + + K A+ D + L +
Sbjct: 28 DKITSGYKVRRSKDDPNVMAQSEKTKIQIRGLQVASRNAQDGVSMLQAAEGGLESIGNML 87
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + N + A + + +++ +
Sbjct: 88 MRIKELTIQAANGTNDLNDKEVIQNEINELVAGIETTAKGTEFNGVKLLSQGNKFSDQTN 147
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ ++ ++ D + +T + E + ++ I+ +
Sbjct: 148 VMTKSVPIGANVGDLEDIPFYNLTTEGLDIKGKINVTAASKLGESLDAVNNAIETVLSVR 207
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+ GS+ +R + + + +E LVDAD+A E + Q ++ +
Sbjct: 208 SEYGSLENRFEECMNNVGEISLKMEGANSELVDADVAEEMMIYAKSDILYQSSLAIMRQT 267
Query: 440 NNSTARILSLF 450
NN +L +
Sbjct: 268 NNFPMDVLKIL 278
>gi|33311205|gb|AAQ03603.1| flagellin [Borrelia burgdorferi]
Length = 127
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 3 AAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 62
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 63 NLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 122
Query: 137 DL 138
+
Sbjct: 123 NS 124
>gi|289679001|ref|ZP_06499891.1| flagellin [Pseudomonas syringae pv. syringae FF5]
gi|330899418|gb|EGH30837.1| flagellin [Pseudomonas syringae pv. japonica str. M301072PT]
gi|330940732|gb|EGH43735.1| flagellin [Pseudomonas syringae pv. pisi str. 1704B]
Length = 282
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 79/221 (35%), Gaps = 3/221 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA +IA + S +
Sbjct: 3 LTVNTNVASLNVQKNLGRASDALSTSMTRLSSGLKINSAKDDAAGLNIATKINSQIKGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ + ++ +++ ++ TD ++ E TQ+ S+
Sbjct: 63 MAIKNANDGMSIAQTAEGALQESTNILQRMRELAVQSRNDSNSATDRVALNKEFTQMSSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA ++ NG+N + + T + + S + ++
Sbjct: 123 LTRIANSTNLNGKNLIDGSASTMTFQVGSNSGASNQITLTLSASFDANTLGVGSAITIVG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
S + E + + ST
Sbjct: 183 SDSAAAETNFSAAMAAIDSALQTINNTRSDLGAAQNRLTST 223
Score = 79.0 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 55/138 (39%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + S + ++ + +D+ + ++ ID+ ++
Sbjct: 145 MTFQVGSNSGASNQITLTLSASFDANTLGVGSAITIVGSDSAAAETNFSAAMAAIDSALQ 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ ++ + + +GR+ D D A+E+ +L+ QT QQ +
Sbjct: 205 TINNTRSDLGAAQNRLTSTISNLQNINENASAALGRIQDTDFAAETAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 SVLAQANQLPSAVLKLLQ 282
>gi|324325777|gb|ADY21037.1| flagellin [Bacillus thuringiensis serovar finitimus YBT-020]
Length = 266
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 59/169 (34%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A+DN A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNHASDNPANVAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + A+A + +V+ +++ + S+ +E L Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVTNVLQRMRDVAVQSANGTNLNKNRDSLNNEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I ++FN + T + Q
Sbjct: 123 YIDETTAFNDLSVFDGQNRPVTLDDIGHTVNVTKHISPSPTQHDINIST 171
Score = 93.7 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 71/239 (29%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T + +
Sbjct: 27 MEHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNV 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + + T T + + + L
Sbjct: 87 LQRMRDVAVQSANGTNLNKNRDSLNNEFQSLTEQIGYIDETTAFNDLSVFDGQNRPVTLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ ++ + + + + + I+ ++ + +G++ +R+
Sbjct: 147 DIGHTVNVTKHISPSPTQHDINISTEQEARAAIRKIEEALQNVSLYRADLGAMINRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 207 IENLNSQSTALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVYKLLQ 265
>gi|330829153|ref|YP_004392105.1| flagellin-like protein [Aeromonas veronii B565]
gi|328804289|gb|AEB49488.1| Flagellin-like protein [Aeromonas veronii B565]
Length = 267
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 3/145 (2%)
Query: 19 DINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAK 78
+ N L+ R+SSGLR++ A D+AA I+ + S L+ + G S A+
Sbjct: 2 NTNKALDTAYQRLSSGLRINSAKDDAAGLQISNRLTSQINGLNQGNRNANDGISLAQTAE 61
Query: 79 AGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
M + + ++ D ++Q E+ QL +++ IA+ ++F G L
Sbjct: 62 GAMEEITGMFQRMRVLAEQSANGSNTTADRSALQQEVKQLATEINRIAKDTTFGGTKLLD 121
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGK 160
A +
Sbjct: 122 GSYKGVFQVGADAKQTISFSLTQAN 146
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 44/144 (30%)
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
V + ++ + + + + ++
Sbjct: 124 YKGVFQVGADAKQTISFSLTQANGFNISGIAAAASAGAAFATLAAINITSQSNAQSVLGA 183
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+D I ++G+I +R+ + + + R+ DAD A E+ L+
Sbjct: 184 VDKMIAGVDRKRAELGAIQNRMESTIRNQANIAENLSSARSRVRDADFAVETAALTQYNI 243
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
QQ A L+ N LSL R
Sbjct: 244 LQQAASTVLAQANQRPNGALSLLR 267
>gi|220905541|ref|YP_002480853.1| flagellin domain-containing protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869840|gb|ACL50175.1| flagellin domain protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 295
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 77/202 (38%), Gaps = 3/202 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A + L NL R+S+GLR++ AAD+AA +I ++M++D AL
Sbjct: 3 INHNQMATQVANTLTSHYGNLSNSVQRLSTGLRINSAADDAAGLAIRELMRTDIAALQQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A ++ + + +K T I+SE + S++
Sbjct: 63 VRNANDAISLIQTADGALAVIDEKLIRMKELAEQAATGTYDSTQRLMIESEYQAMASEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG L +L S T + + ++ G + + DYY S+
Sbjct: 123 RIANATDFNGIYLLNGNLSSDTHNGSDLTATGKLKVHFGSMNDSAEDYYYIKIGNSTASA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQV 202
+ + + +
Sbjct: 183 LGVGNQADKTSAAYTVSTQEAA 204
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/200 (15%), Positives = 63/200 (31%)
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
AA ++T AS +D +++SD + A
Sbjct: 94 AEQAATGTYDSTQRLMIESEYQAMASEITRIANATDFNGIYLLNGNLSSDTHNGSDLTAT 153
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
++ + D + V + + + + A ++ + ++
Sbjct: 154 GKLKVHFGSMNDSAEDYYYIKIGNSTASALGVGNQADKTSAAYTVSTQEAAQKALVGLND 213
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ +G++ +R+ + ++ R+ D D+A+E T Q Q
Sbjct: 214 AVISKDKIRAHLGALQNRLENTISNLTTQSQNLQAAESRISDVDVATEMTAFVRNQILTQ 273
Query: 431 LAVQALSIVNNSTARILSLF 450
AV LS N+ LSL
Sbjct: 274 SAVAMLSQANSMPQMALSLI 293
>gi|87242460|gb|ABD33769.1| flagellin [Bacillus thuringiensis serovar thompsoni]
Length = 324
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++ L+ Q+ I++ + FN + L
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTDGNQAALNKGFAALKDQIDYISKNTEFNDQKLLDGSK 120
Query: 139 GSSTASI 145
S
Sbjct: 121 ESIAIQT 127
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 26/62 (41%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ +G+ +R+ + +K ++ ++ DADMA E + ++ + +
Sbjct: 263 LTKVADNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEA 322
Query: 432 AV 433
+
Sbjct: 323 GI 324
>gi|86139473|ref|ZP_01058042.1| flagellin protein [Roseobacter sp. MED193]
gi|85823976|gb|EAQ44182.1| flagellin protein [Roseobacter sp. MED193]
Length = 274
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/143 (38%), Positives = 85/143 (59%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN+ AM A Q L IN +L Q+++S+G V A DN+A W+I+++M+SD
Sbjct: 1 MTSILTNNGAMVALQTLSSINSDLTETQNQISTGKEVDSAKDNSAIWAISKVMESDVAGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AVSD++ LG S V +A AG + D++ +K K+ A D +++++ +L++Q+
Sbjct: 61 EAVSDSLSLGESTVAVATAGAEQITDLLKEMKEKVVAATGENVDHAKLEADVDELKNQIT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTA 143
+ S FNG N L T G T
Sbjct: 121 SVIGASQFNGANLLNTAGGDITV 143
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/203 (23%), Positives = 80/203 (39%)
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
A A T K VAA+ + + V + +
Sbjct: 72 STVAVATAGAEQITDLLKEMKEKVVAATGENVDHAKLEADVDELKNQITSVIGASQFNGA 131
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ + S+ + + V + + ++ E + I
Sbjct: 132 NLLNTAGGDITVLSSLDRDASGTVTASNITVASVDFEAGLNLTSVDMSDATTAEASIDDI 191
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
+ I+ A A +G+ ++RI Q +F+ + DA++ G+G LVD +M S RL ALQTQ
Sbjct: 192 EALIQAAVDGAAALGASAARIEKQNEFVSKVTDAMKSGIGALVDTNMEEASARLKALQTQ 251
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQL VQAL+I N++ + LFR
Sbjct: 252 QQLGVQALTIANSAPETLQQLFR 274
>gi|2935155|gb|AAC38199.1| type II flagellin [Burkholderia cepacia]
Length = 384
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/227 (18%), Positives = 83/227 (36%), Gaps = 3/227 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R + AAD+AA +I+ M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQNALSQAITRLSSGKRTNSAADDAAGLAISTRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ G S + A + +S + + I+ TD ++Q E+ Q
Sbjct: 61 NQGVSNANDGVSMIQTASSALSSLTNSLQRIRQLAVQASTGTMSSTDQAALQQEVAQQIQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG N L G + + +V + D + + I L + +
Sbjct: 121 EVNRIASQTTYNGTNILDGSAGIVSFQVGANVGQTMSLDLSQSMSAAKIGGGLVQKGQTV 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
+ T + + + + Y +
Sbjct: 181 GTVTGLSLDNAGAYVSSGATITAINVISDGQGGYTFTDQNGQSISSG 227
Score = 80.6 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/386 (10%), Positives = 108/386 (27%), Gaps = 10/386 (2%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ ++ ++ +S+AI +S+ K D + + T++Q+Q+ + +G
Sbjct: 9 NSLVAQQNLNGSQNALSQAITRLSSGK-----RTNSAADDAAGLAISTRMQTQINGLNQG 63
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + SS S + + + + +
Sbjct: 64 VSNANDGVSMIQTASSALSSLTNSLQRIRQLAVQAST-----GTMSSTDQAALQQEVAQQ 118
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
+ + + D + + + S + A KG
Sbjct: 119 IQEVNRIASQTTYNGTNILDGSAGIVSFQVGANVGQTMSLDLSQSMSAAKIGGGLVQKGQ 178
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
V + A S + + +V + ++ +
Sbjct: 179 TVGTVTGLSLDNAGAYVSSGATITAINVISDGQGGYTFTDQNGQSISSGAATAVFGSNAT 238
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + + + L ++ + +N + + +
Sbjct: 239 TGSGTAVGALSLQPSATGANTTAAQLTAINNAIAQINAVNKPVTVSGLDISTVSGANVAM 298
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
ID ++ +G+ +R + + ++ DA+ A E+ +S
Sbjct: 299 VSIDNALQTVNNLQAALGAAQNRFTAIATAQQAESTDLSSAQSQITDANFAQETANMSKN 358
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ + L+ N+ ++L L +
Sbjct: 359 QVLQQAGISVLAQANSLPQQVLKLLQ 384
>gi|229195971|ref|ZP_04322724.1| Flagellin [Bacillus cereus m1293]
gi|228587530|gb|EEK45595.1| Flagellin [Bacillus cereus m1293]
Length = 269
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 58/169 (34%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A+DN A +I M + +
Sbjct: 6 IGTNVLSMNARQSLYENEKRMNVAMEHLTTGKKLNHASDNPANVAIVTRMHARASGMRVA 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +V+ +++ + S+ E L Q+
Sbjct: 66 IRNNEDAISMLRTAEAALQTVTNVLQRMRDVAVQSANGTNSNKNRDSLNKEFQSLTEQIG 125
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I ++FN + T + Q
Sbjct: 126 YIDETTAFNDLSLFDGQNRPVTLDDIGHTVNVTKHIPPSPTQHDINIST 174
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 69/239 (28%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T + +
Sbjct: 30 MEHLTTGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNV 89
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + T T + + + L
Sbjct: 90 LQRMRDVAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIDETTAFNDLSLFDGQNRPVTLD 149
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + I+ ++ + +G++ +R+
Sbjct: 150 DIGHTVNVTKHIPPSPTQHDINISTEQEARAAIRKIEEALQNVSLHRADLGAMINRLQFN 209
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 210 IENLNSQSTALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSKLLQ 268
>gi|188586844|ref|YP_001918389.1| flagellar hook-associated protein 3 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351531|gb|ACB85801.1| flagellar hook-associated protein 3 [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 328
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 19/180 (10%), Positives = 61/180 (33%), Gaps = 4/180 (2%)
Query: 6 TN-HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN + + + L ++ Q+++S+G R+ +D+ A + ++++ L+
Sbjct: 4 TNKMMSDNMLRNLNTNLRDMNHTQNKLSTGKRILSPSDDPAGTARTLDLRTEETELAKYK 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
+ S + + + + DV+ ++ +++ +E+ +L+ L +
Sbjct: 64 QNVDDADSWLTSTDSALDEVDDVLQRVRELTIYAASDSVDQQSREALAAEVMELKEHLVE 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+A + + + + + + T + T
Sbjct: 124 VANTDFGGKHIFGGHNTTDKPFDMDDVEEMNGEEGEYNTFDVEYSGNRGRLNTDISSDVT 183
Score = 46.7 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 24/245 (9%), Positives = 56/245 (22%)
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ D D + + + A +
Sbjct: 60 AKYKQNVDDADSWLTSTDSALDEVDDVLQRVRELTIYAASDSVDQQSREALAAEVMELKE 119
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+A NTT + + +
Sbjct: 120 HLVEVANTDFGGKHIFGGHNTTDKPFDMDDVEEMNGEEGEYNTFDVEYSGNRGRLNTDIS 179
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T S D E + + + M+ D +
Sbjct: 180 SDVTISKNLHGEEVFGSFDEEENGENGENGDEAISQNMFKMLDGVYDSMMEDDGGGTEKL 239
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
E + +D I+ ++G+ +R+ L ++ ++ + ++ + +ADMA
Sbjct: 240 SNEHLQDLDHWIENNLDNRAEVGARQNRLELSKNRLQDIEHLTKEDLSETEEADMAKTIM 299
Query: 421 RLSAL 425
L +
Sbjct: 300 DLKSQ 304
>gi|12057229|gb|AAB81422.2| FlaD [Sinorhizobium meliloti]
Length = 321
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 83/205 (40%), Positives = 109/205 (53%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI+TN +AM+A Q LR IN+NLE Q R+SSG RV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSIMTNPAAMAALQTLRAINHNLETTQGRISSGFRVETAADNAAYWSIATTMRSDNAAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S V DA+GLG++KVD + M IDVM+ IK K+ A E G D I E+ +L+SQL
Sbjct: 61 STVHDALGLGAAKVDTFYSAMDTVIDVMTEIKAKLVAASEPGVDKDKINKEVAELKSQLN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A+ +SF+GENWL ++ + + + D + V D + D S
Sbjct: 121 SAAQSASFSGENWLYNGAAAALGTKSIVASFNRSADGSVTVSTLNYDTAKSVLIDVTDPS 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ D
Sbjct: 181 RGMLTKAVDADALQSTPTGTARNYY 205
Score = 93.3 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 60/319 (18%), Positives = 115/319 (36%), Gaps = 2/319 (0%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ + +++ + ++ D ++T ++ L
Sbjct: 4 IMTNPAAMAALQTLRAINHNLETTQGRISSGFRVETAADNAAYWSIATTMRSDNAALSTV 63
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + + + ++ ++ K KL S + + A+ + +
Sbjct: 64 HDALGLGAAKVDTFYSAMDTVIDVMTEIKAKLVAASEPGVDKDKINKEVAELKSQLNSAA 123
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+A + + + + +T + ++
Sbjct: 124 QSASFSGENWLYNGAAAALGTKSIVASFNRSADGSVTVSTLNYDTAKSVLIDVTDPSRGM 183
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
T + + + D + +M+S +D I
Sbjct: 184 LTKAV--DADALQSTPTGTARNYYLIDAGAAPGGATEIEIDNATTGAQLGDMISVVDELI 241
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
T +A +G+I+SRI +QE F+ + D ++KGVGRLVDADM ESTRL ALQTQQQL
Sbjct: 242 SQLTDSAATLGAITSRIEMQESFVANLMDVIDKGVGRLVDADMNEESTRLKALQTQQQLG 301
Query: 433 VQALSIVNNSTARILSLFR 451
+Q+LSI N ++ IL LF+
Sbjct: 302 IQSLSIANTTSENILRLFQ 320
>gi|217959242|ref|YP_002337790.1| flagellin [Bacillus cereus AH187]
gi|217065816|gb|ACJ80066.1| flagellin [Bacillus cereus AH187]
Length = 266
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 60/169 (35%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++A Q L + + V + +++G ++++A+DN A +I M + ++
Sbjct: 3 IGTNVLSLNARQSLYENEKRMNVAMEHLATGKKLNNASDNPANIAIVTRMHARASSMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+A + +V+ +++ + S+ E L Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVTNVLQRMRDLAVQSANDTNSNKNRDSLNKEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + + T + Q
Sbjct: 123 YIDETTDFNDLSVFDGQNRTVTLDDIGHTVNVTKHIPPSPTQHDINIST 171
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 69/239 (28%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A + A + T + +
Sbjct: 27 MEHLATGKKLNNASDNPANIAIVTRMHARASSMRVAIRNNEDAISMLRTAEAALQTVTNV 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ +D + T T + + + L
Sbjct: 87 LQRMRDLAVQSANDTNSNKNRDSLNKEFQSLTEQIGYIDETTDFNDLSVFDGQNRTVTLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + I+ ++ + +G++ +R+
Sbjct: 147 DIGHTVNVTKHIPPSPTQHDINISTEQEARAAIRKIEEALQNVSLHRADLGAMINRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 207 IENLNSQSTALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSKLLQ 265
>gi|307546961|ref|YP_003899440.1| flagellar hook-associated protein FlgL [Halomonas elongata DSM
2581]
gi|307218985|emb|CBV44255.1| flagellar hook-associated protein FlgL [Halomonas elongata DSM
2581]
Length = 405
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/434 (8%), Positives = 101/434 (23%), Gaps = 42/434 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + V +++SG RV + +D+ S A +
Sbjct: 3 ISTVTMFEQSVSSMNRQQSDFLDVSQQIASGRRVVNPSDDPQAASRAVGVGQAKAVTEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
D+ + + ++ ++ D +++ K + +S ++L+ +
Sbjct: 63 GDSRVSARNALSQGESVLNSVSDAVTSAKTLLVQASSDTLSDADRESVASELRGVYETLV 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N G S G + G ++ + DS +
Sbjct: 123 GQANATDGNGRYLFGGYEDGSPPFVENGDGHMEYVGSTEVRRQRIDASRVMEVSDSGQEI 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
Sbjct: 183 FRSVPSGAGYVAEAAAGNDG---------------------------------------- 202
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ A + + +Y + D
Sbjct: 203 --SLTFKGPQTLDADADDYGKRFEISFAEDGGTLSYSVSADGAPVAGMQDVAYQAGDSLR 260
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
++ D+ + D ++ L + + +
Sbjct: 261 FGGLSMELKGEPADGDSLTVGPAESMDPDLFQTLEKAIGVLENPAETSREKAARGNTLNT 320
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ +D + +G+ + + + + E+ + LVD D A + S
Sbjct: 321 AMRELDHSLDNVLTVRASMGARLNELDVVDSVSDNRMLNYEQTLSDLVDLDYAEAISEYS 380
Query: 424 ALQTQQQLAVQALS 437
Q Q + + +
Sbjct: 381 LRQIGMQASQKTFA 394
>gi|306516591|gb|ADM96184.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 77/204 (37%), Gaps = 3/204 (1%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 3 NTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAI 62
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ A M + + ++ TIK K T + G +Q++I +L +L +
Sbjct: 63 SNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDN 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA +SFNG+ L + + I S + + + S
Sbjct: 123 IANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSGE 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 183 VQFTLKNYNGIDDFQFQKVVISTS 206
>gi|189164115|gb|ABU96042.2| flagellin A1 [Bacillus thuringiensis serovar entomocidus]
Length = 272
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 3/256 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 3 INTNINSMRTQEYMRQNQDKMNTAMYRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D+ S+ E L+S++
Sbjct: 63 ARNTQDAMSALRTGDAALGSISNILLRMRDLATQASNGTNNTEDTASLNKEYEALKSEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SFNG +L TD G + + S + I ++
Sbjct: 123 HIANKTSFNGIKFLSTDKGGAADIKVQLSDASGDTMTIDSLDAKKITTANLTTLADRGTA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + T A + A +
Sbjct: 183 ETEIKALDTAIQELADARATFGSQLNRLDHNLNNVTSQATNMAAAASQIEDADMAKEMSE 242
Query: 241 QAKGIATIPVPLPAAP 256
K +
Sbjct: 243 MTKFKILNEAGISMLS 258
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 27/210 (12%), Positives = 59/210 (28%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A+ L AA + S ++ + + +
Sbjct: 63 ARNTQDAMSALRTGDAALGSISNILLRMRDLATQASNGTNNTEDTASLNKEYEALKSEID 122
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
N T + + + + AN ++
Sbjct: 123 HIANKTSFNGIKFLSTDKGGAADIKVQLSDASGDTMTIDSLDAKKITTANLTTLADRGTA 182
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
E + +DT I+ A GS +R+ + + + ++ DADMA E +
Sbjct: 183 ETEIKALDTAIQELADARATFGSQLNRLDHNLNNVTSQATNMAAAASQIEDADMAKEMSE 242
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + + + LS N + + L +
Sbjct: 243 MTKFKILNEAGISMLSQANQTPQMVSKLLQ 272
>gi|221202118|ref|ZP_03575153.1| A-type flagellin [Burkholderia multivorans CGD2M]
gi|221209074|ref|ZP_03582069.1| A-type flagellin [Burkholderia multivorans CGD2]
gi|221171069|gb|EEE03521.1| A-type flagellin [Burkholderia multivorans CGD2]
gi|221177912|gb|EEE10324.1| A-type flagellin [Burkholderia multivorans CGD2M]
Length = 385
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/260 (18%), Positives = 92/260 (35%), Gaps = 3/260 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +I+ M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQNALSQAITRLSSGKRINSAADDAAGLAISTRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ G S + A + +S + + I+ TD ++Q E+ Q
Sbjct: 61 NQGVSNANDGVSMIQTASSALSSLTNSLQRIRQLAVQASTGTMSSTDQAALQQEVAQQIQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG N L + G + + +V + D + + I L +
Sbjct: 121 EVNRIASQTTYNGTNILNGNAGIVSFQVGANVGQTISLDLSQSMSAAQIGGGLVQAGQTV 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ T + + + + + + T + A A
Sbjct: 181 GTVTGLSLDSSGAYTSSGAVITAVNVLSDGKGGFTFTDQNGTAITGATAAAIFATSTAAA 240
Query: 238 TFDQAKGIATIPVPLPAAPA 257
+ +I A
Sbjct: 241 SNGATVEQISISAGATNASM 260
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/280 (10%), Positives = 73/280 (26%)
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ L + + +L V G + L +
Sbjct: 106 TDQAALQQEVAQQIQEVNRIASQTTYNGTNILNGNAGIVSFQVGANVGQTISLDLSQSMS 165
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
QA L + T+SG + ++ + +
Sbjct: 166 AAQIGGGLVQAGQTVGTVTGLSLDSSGAYTSSGAVITAVNVLSDGKGGFTFTDQNGTAIT 225
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
+ ++ + S+ L ++ + +N +
Sbjct: 226 GATAAAIFATSTAAASNGATVEQISISAGATNASMSQASLTAISNAVAQINAVNKPATVS 285
Query: 352 TDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ + ID ++ +G+ +R + + ++
Sbjct: 286 NLDISTVSGANVAMVSIDNALQTVNNLQAALGAAQNRFTAIATAQQAESTDLSSAQSQIT 345
Query: 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DA+ A E+ +S Q QQ + L+ N+ ++L L +
Sbjct: 346 DANFAQETANMSKNQVLQQAGISVLAQANSLPQQVLKLLQ 385
>gi|320178175|gb|EFW53152.1| Flagellar biosynthesis protein FliC [Shigella boydii ATCC 9905]
gi|320182762|gb|EFW57646.1| Flagellar biosynthesis protein FliC [Shigella boydii ATCC 9905]
Length = 353
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/330 (13%), Positives = 90/330 (27%)
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+++A+ K S + V +
Sbjct: 24 VSDGDTVQATINNGFGTAASATNYKYDSASKSYSFDTTTASAADVQKYLTPGVGDTAKGT 83
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
T D + + + T + AAN T
Sbjct: 84 ITIDGSAQDVQISSDGKITSSNGDKLYIDTTGRLTKNGSSASLTEASLSTLAANNTKATT 143
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
I + PNT + + AA + +++ + +
Sbjct: 144 IDIGGTSISFTGNSTTPNTITYSVTGAKVDQAAFDKAVSTSGNNVDFTTAGYSVDGATGA 203
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
T + + + T T +D + V + TDA +
Sbjct: 204 VTKGVAPVYVDNNGALTTSDTVDFYLQDDGSVTNGSGKAVYKDADGKLTTDAETKAATTA 263
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ + +D I +G++ +R+ + + + R+ DAD A+E + +
Sbjct: 264 DPLKALDEAISSIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNM 323
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFRG 452
S Q QQ L+ N ++LSL +G
Sbjct: 324 SKAQIIQQAGNSVLAKANQVPQQVLSLLQG 353
>gi|237799223|ref|ZP_04587684.1| flagellin [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022078|gb|EGI02135.1| flagellin [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 282
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 71/183 (38%), Gaps = 3/183 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN +++S + L + L R+SSGL++ A D+AA +IA + S +
Sbjct: 3 LTVNTNVTSLSVQKNLSRASDALSNSMGRLSSGLKIMSAKDDAAGLNIATKINSQIKGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQ 118
G S A+ + ++ +++ ++ D ++ E TQ+ S+
Sbjct: 63 MAIKNANDGMSIAQTAEGALQESTNILQRMRELAVQSRNDSNSESDRTALNKEFTQMSSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA ++ NG+ + + T + + S + ++
Sbjct: 123 LTRIALSTNLNGKPLIDGTASTMTFQVGSNSGASNQITLTLSASFDANTLGVGSAVTIVG 182
Query: 179 SST 181
S +
Sbjct: 183 SDS 185
Score = 73.2 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 55/138 (39%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + S + ++ + +D+ + ++ ID+ ++
Sbjct: 145 MTFQVGSNSGASNQITLTLSASFDANTLGVGSAVTIVGSDSAAAETNFSAAIAAIDSALQ 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +G+ +R+ ++ + + + R+ D D A+E+ +L+ QT QQ +
Sbjct: 205 TINSTRSDLGAAQNRLTSTISNLQNINENASAALSRIQDTDFAAETAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 SILAQANQLPSAVLKLLQ 282
>gi|254445413|ref|ZP_05058889.1| Bacterial flagellin N-terminus domain protein [Verrucomicrobiae
bacterium DG1235]
gi|198259721|gb|EDY84029.1| Bacterial flagellin N-terminus domain protein [Verrucomicrobiae
bacterium DG1235]
Length = 277
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 43/104 (41%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
++ + + + + ++ +G++ SR+ + + +++ + +
Sbjct: 173 DNSVDSGQADISVDSSTAMDTLIEAVQQVADNRATLGAVQSRLEIVDAQLQVQSENLTAA 232
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
R+ D D+A ESTRL+ Q Q LS N+ +L L
Sbjct: 233 NSRIRDVDVAEESTRLAKYQILVQSGTAMLSQANSLPESVLRLL 276
Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Query: 23 NLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82
L R+SSG ++ + +D+AA ++++ +++ N + A S V A +S
Sbjct: 2 QLSRSLARLSSGSKIINPSDDAAGLAVSEKLEAQNSRIRAAKVNAQNAVSLVQTADGFLS 61
Query: 83 KAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
V++ + + D +E QL+ QLRDI
Sbjct: 62 TMSTVLNRMSELSMLAKDVTKNPDDIALYGTEFDQLKDQLRDIIGN 107
>gi|322806998|emb|CBZ04568.1| flagellar biosynthesis protein FliC [Clostridium botulinum H04402
065]
Length = 284
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 65/172 (37%), Gaps = 3/172 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N ++++A + + D+++SG +V + D+ + ++ K L
Sbjct: 3 LSHNLASLNAFRNYSKVLREQSTALDKITSGYKVRCSKDDPNVMAQSEKTKIQIRGLQVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S G S + A+ G+ +++ IK D + IQ+EI +L + +
Sbjct: 63 SRNAQDGVSMLQAAEGGLESIGNMLMRIKELTIQAANGTNDLDDKEVIQNEINELVAGIE 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
A+G+ FNG L S + K+ + I + +
Sbjct: 123 TTAKGTEFNGVKLLSQGNKFSNQADVKTKSVPIGANVGDLEDIPFYNLTTEG 174
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/251 (10%), Positives = 71/251 (28%)
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
++ V + + K A+ D + L +
Sbjct: 28 DKITSGYKVRCSKDDPNVMAQSEKTKIQIRGLQVASRNAQDGVSMLQAAEGGLESIGNML 87
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + N + A + + +++ D
Sbjct: 88 MRIKELTIQAANGTNDLDDKEVIQNEINELVAGIETTAKGTEFNGVKLLSQGNKFSNQAD 147
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
++ ++ ++ D + +T + + + ++ I+ +
Sbjct: 148 VKTKSVPIGANVGDLEDIPFYNLTTEGLDIKGEIDVTNASKLGKSLDAVNNAIETVLSVR 207
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+ GS+ +R + + + +E LVDAD+A E + Q ++ +
Sbjct: 208 SEYGSLENRFEECMNNVGEISLKMESANSELVDADVAEEMMIYAKSDILYQSSLAIMRQT 267
Query: 440 NNSTARILSLF 450
NN +L +
Sbjct: 268 NNFPMDVLKIL 278
>gi|86356320|ref|YP_468212.1| flagellin C protein [Rhizobium etli CFN 42]
gi|86280422|gb|ABC89485.1| flagellin C protein [Rhizobium etli CFN 42]
Length = 301
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 85/226 (37%), Positives = 115/226 (50%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN SA +A Q LR++N L Q+ VSSG RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNSSAQAALQTLRNVNQGLNKTQNHVSSGYRVEKASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+G+G++KVD A M AIDV+ IK K+ A E G D +Q EI QLQ QL
Sbjct: 61 SAVSDALGVGAAKVDTAYTAMDSAIDVVGEIKAKLVAATENGVDKAKVQEEIGQLQQQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ +SFNGENW+ G+ + + GS + + + + S
Sbjct: 121 SIAQSASFNGENWVAGANGTKSVVSSFVRDGSNAVSITTTDYVLNSGSAGNVLFGMSNGS 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + + + + ++ T K T
Sbjct: 181 VETSTGILGTSTGATGSIYSMNITNFTAGQIQSALTNVESALKSMT 226
Score = 90.6 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 48/113 (42%), Positives = 75/113 (66%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ + ++ ++ ++ +++ +K T+A +GS+SSRI QEDF+
Sbjct: 189 GTSTGATGSIYSMNITNFTAGQIQSALTNVESALKSMTSAGAALGSLSSRIDSQEDFVSA 248
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D+++ G+GRLVDADM ES++LSALQTQQQLA+Q+LSI N+S+ ILSLFR
Sbjct: 249 LSDSIDSGIGRLVDADMEEESSKLSALQTQQQLAIQSLSIANSSSQNILSLFR 301
>gi|157101667|gb|ABV23538.1| flagellin A [Bacillus thuringiensis serovar alesti]
gi|157101671|gb|ABV23541.1| flagellin A [Bacillus thuringiensis serovar alesti]
gi|157101676|gb|ABV23545.1| flagellin A [Bacillus thuringiensis serovar alesti]
Length = 281
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 68 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEID 127
Query: 121 DIARGSSFNGENWLRTDLG 139
IA ++FNG +L G
Sbjct: 128 HIADKTNFNGNAFLGGAGG 146
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 35/84 (41%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+DT I+ A GS +R+ + + + ++ DADMA E + ++ +
Sbjct: 198 LDTAIQEIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKI 257
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
+ + LS N + + L +
Sbjct: 258 LNEAGISMLSQANQTPQMVSKLLQ 281
>gi|306516553|gb|ADM96165.1| FlaA [Campylobacter jejuni]
gi|306516641|gb|ADM96209.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 77/204 (37%), Gaps = 3/204 (1%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 3 NTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAI 62
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ A M + + ++ TIK K T + G +Q++I +L +L +
Sbjct: 63 SNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDN 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA +SFNG+ L + + I S + + + S
Sbjct: 123 IANTTSFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGGRISSSGE 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 183 VQFTLKNYNGIDDFQFQKVVISTS 206
>gi|330975987|gb|EGH76053.1| flagellin [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 282
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 80/221 (36%), Gaps = 3/221 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA +IA + S +
Sbjct: 3 LTVNTNVASLNVQKNLGRASDALSTSMTRLSSGLKINSAKDDAAGLNIATKINSQIKGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G+S A+ + ++ +++ ++ TD ++ E TQ+ S+
Sbjct: 63 MAIKNANDGTSIAQTAEGALQESTNILQRMRELAVQSRNDSNSATDRVALNKEFTQMSSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA ++ NG+N + + T + + S + ++
Sbjct: 123 LTRIANSTNLNGKNLIDGSASTMTFQVGSNSGASNQITLTLSASFDANTLGVGSAITIVG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
S + E + + ST
Sbjct: 183 SDSAAAETNFSAAMAAIDSALQTINNTRSDLGAAQNRLTST 223
Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 55/138 (39%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + S + ++ + +D+ + ++ ID+ ++
Sbjct: 145 MTFQVGSNSGASNQITLTLSASFDANTLGVGSAITIVGSDSAAAETNFSAAMAAIDSALQ 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ ++ + + +GR+ D D A+E+ +L+ QT QQ +
Sbjct: 205 TINNTRSDLGAAQNRLTSTISNLQNINENASAALGRIQDTDFAAETAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 SVLAQANQLPSAVLKLLQ 282
>gi|150395495|ref|YP_001325962.1| flagellin domain-containing protein [Sinorhizobium medicae WSM419]
gi|150027010|gb|ABR59127.1| flagellin domain protein [Sinorhizobium medicae WSM419]
Length = 321
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 77/139 (55%), Positives = 96/139 (69%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI+TN +AM+A Q LR IN+NLE Q R+SSG RV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSIMTNPAAMAALQTLRAINHNLETTQGRISSGYRVETAADNAAYWSIATTMRSDNAAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S V DA+GLG++KVD + M IDVM+ IK K+ A E G D I E+ +L+SQL+
Sbjct: 61 STVHDALGLGAAKVDTFYSAMDTVIDVMTEIKAKLVAASEPGVDKDKINKEVAELKSQLK 120
Query: 121 DIARGSSFNGENWLRTDLG 139
A+ +SF+GENWL
Sbjct: 121 SAAQSASFSGENWLYNGAA 139
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 61/319 (19%), Positives = 116/319 (36%), Gaps = 2/319 (0%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ + +++ + ++ D ++T ++ L
Sbjct: 4 IMTNPAAMAALQTLRAINHNLETTQGRISSGYRVETAADNAAYWSIATTMRSDNAALSTV 63
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + + + ++ ++ K KL S + + A+ + +
Sbjct: 64 HDALGLGAAKVDTFYSAMDTVIDVMTEIKAKLVAASEPGVDKDKINKEVAELKSQLKSAA 123
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+A + + + + +T + A+
Sbjct: 124 QSASFSGENWLYNGAAAALGTKSIVASFNRSADGSVAVSTLNYDTAKSVLIDVADPARGM 183
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
T + + + D+ + +M+S +D I
Sbjct: 184 LTKAV--DADALQSTPAGTARNYYLIDAGAAPAGATEIEIDSATTGAQLGDMISVVDELI 241
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
T +A +G+I+SRI +QE F+ + D ++KGVGRLVDADM ESTRL ALQTQQQL
Sbjct: 242 SQLTDSAATLGAITSRIEMQESFVANLMDVIDKGVGRLVDADMNEESTRLKALQTQQQLG 301
Query: 433 VQALSIVNNSTARILSLFR 451
+Q+LSI N ++ IL LF+
Sbjct: 302 IQSLSIANTTSENILRLFQ 320
>gi|306516627|gb|ADM96202.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 74/204 (36%), Gaps = 3/204 (1%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN +A++A +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 3 NTNGAALNAKANSDLNAKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAI 62
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ A M + + ++ TIK K T + G +Q++I +L +L +
Sbjct: 63 SNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINKLMEELDN 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA +SFNG+ L + + I S + + S
Sbjct: 123 IANTTSFNGKQLLSGNFTNQEFQIGASSNQTVKATIGATQSSKIGVTRFETGAQSFTSGV 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKD 205
G +
Sbjct: 183 VGLTIKNYNGIEDFKFDNVVISTS 206
>gi|306516573|gb|ADM96175.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 77/204 (37%), Gaps = 3/204 (1%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 3 NTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAI 62
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ A M + + ++ TIK K T + G +Q++I +L +L +
Sbjct: 63 SNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDN 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA +SFNG+ L + + I S + + + S
Sbjct: 123 IANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISASGE 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 183 VQFTLKNYNGIDDFQFQKVVISTS 206
>gi|291163413|gb|ADD80732.1| flagellin A [Campylobacter jejuni]
gi|306516551|gb|ADM96164.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 77/204 (37%), Gaps = 3/204 (1%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 3 NTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAI 62
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ A M + + ++ TIK K T + G +Q++I +L +L +
Sbjct: 63 SNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDN 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA +SFNG+ L + + I S + + + S
Sbjct: 123 IANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISTSGE 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 183 VQFTLKNYNGIDDFQFQKVVISTS 206
>gi|291534875|emb|CBL07987.1| Flagellin and related hook-associated proteins [Roseburia
intestinalis M50/1]
Length = 275
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N +AM A++ L+ E D++ SG R+ D+AA I++ M+ +L+
Sbjct: 2 VITHNMAAMGATRHLKTSAKKTEEASDKLGSGYRIVTDKDDAAGLCISEAMRHQIKSLNR 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQL 119
V + G + A A + + +++ + T D +IQSEI QLQ ++
Sbjct: 62 VDGNLADGIGLIQTADAALEETQNILDRMAELTTQAANDINTDADRDAIQSEIGQLQEEV 121
Query: 120 RDIARGSSFNGENW 133
I+ +SFNG+
Sbjct: 122 DRISNDTSFNGQYM 135
Score = 77.5 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 18/201 (8%), Positives = 48/201 (23%)
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
AA + A ++ + + T+
Sbjct: 75 TADAALEETQNILDRMAELTTQAANDINTDADRDAIQSEIGQLQEEVDRISNDTSFNGQY 134
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ L + + + + + + + +
Sbjct: 135 MLAAGTPKAAPGYYKVQAGALGGQAINIEYINASKESLGIADLDVSSYDNAGKSLEKVQN 194
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
I A G+ ++ +L + + ++ DADM E+ + Q
Sbjct: 195 AISIAGQWRNDFGATQEKLEHAVRSTELTHENTQSAESKIRDADMGEETIIYTRNQILVN 254
Query: 431 LAVQALSIVNNSTARILSLFR 451
L+ N++ + L +
Sbjct: 255 AGQSLLAQFNSNPKSVAMLLQ 275
>gi|227820865|ref|YP_002824835.1| flagellin C protein [Sinorhizobium fredii NGR234]
gi|227339864|gb|ACP24082.1| flagellin C protein [Sinorhizobium fredii NGR234]
Length = 302
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 79/146 (54%), Positives = 101/146 (69%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SILTN SA +A Q LR I+ ++E Q+R+S+G+RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MASILTNSSATAALQTLRSISSSMEDTQNRISTGMRVGSASDNAAYWSIATTMRSDNAAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S+V+DA+G+G++KVD A AGM AIDV+ IK KI A E G D +Q EI QLQ QL
Sbjct: 61 SSVTDALGMGAAKVDTAYAGMEAAIDVVKEIKAKIVAATEEGVDGAKVQEEIDQLQDQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA +SFNGENW+ + + T
Sbjct: 121 SIAESASFNGENWIAGEAATKTVVTG 146
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 57/138 (41%), Positives = 78/138 (56%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T T D L + T + + + A+ E +S ++ +
Sbjct: 165 TDAADGTLLFADDGAGGLDTATGILGTAGTNGNDVYGLDISAMDATALGEALSDVEDALT 224
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
T+AA +GS+S+RI LQ DF+ + D++E G+GRLVDADM ESTRL ALQTQQQLA+
Sbjct: 225 AMTSAASSLGSMSTRIDLQADFVSELSDSIENGIGRLVDADMNEESTRLKALQTQQQLAI 284
Query: 434 QALSIVNNSTARILSLFR 451
QALSI N+ + ILSLFR
Sbjct: 285 QALSIANSDSQNILSLFR 302
>gi|227874275|ref|ZP_03992466.1| flagellin [Oribacterium sinus F0268]
gi|227839879|gb|EEJ50318.1| flagellin [Oribacterium sinus F0268]
Length = 246
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 63/146 (43%), Gaps = 3/146 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N +A +A + L N + +++SSG R++ +AD+AA +I++ M+S L
Sbjct: 2 VIQHNIAANNAYRNLSSNASNGQKNLEKLSSGYRINRSADDAAGLAISEQMRSKINGLDQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQL 119
+ + A+ +++ ++ + T + +I E+T L+++L
Sbjct: 62 ATSNANDAIGLIQTAEGALTETHSMLQRMVTLATQSANGTYNSTARTAIGEEVTALKAEL 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASI 145
IA + +NG L +
Sbjct: 122 DRIASTTDYNGVKPLAQTTAITVQIG 147
Score = 75.2 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 33/118 (27%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
N + + E S + + ++ I+
Sbjct: 129 DYNGVKPLAQTTAITVQIGPTSGETLKIASAKMGSSALSVAAIDVSTVSKANSAITKIND 188
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
I + K+G+ +R+ + +K + + R+ D DMA E +
Sbjct: 189 AINTVSTHRAKLGASQNRLEHTINNLKTTNENMTAAESRIRDTDMAKEMAAFTKNNIL 246
>gi|157101686|gb|ABV23553.1| flagellin A [Bacillus thuringiensis serovar kurstaki]
Length = 281
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 68 ARNTQDAMSALRTGDAALGPVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEID 127
Query: 121 DIARGSSFNGENWLRTDLG 139
IA ++FNG +L G
Sbjct: 128 HIADKTNFNGNAFLGGAGG 146
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 35/84 (41%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+DT I+ A GS +R+ + + + ++ DADMA E + ++ +
Sbjct: 198 LDTAIQEIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKI 257
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
+ + LS N + + L +
Sbjct: 258 LNEAGISMLSQANQTPQMVSKLLQ 281
>gi|87242378|gb|ABD33728.1| flagellin [Bacillus thuringiensis serovar tolworthi]
Length = 330
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Query: 25 EVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKA 84
DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + +
Sbjct: 4 SNAMDRLSSGKRINNASDDAAGLAIATRMRARENGLGVAANNTQDGMSLIRTADSALQSV 63
Query: 85 IDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
+++ +++ + +++ E QL+ Q++ I + FN +N L G
Sbjct: 64 SNILLRMRDLANQSANGTNTDENKAAMEKEFGQLKDQIKYITDNTQFNDKNLLDAASG 121
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 31/74 (41%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
V+ ID +K +G+ +R+ + +K ++ ++ DADMA E
Sbjct: 257 DAHNAVNKIDAALKTVADNRATLGATLNRLDFNVNNLKSQSASMASAASQIEDADMAKEM 316
Query: 420 TRLSALQTQQQLAV 433
+ ++ + + +
Sbjct: 317 SEMTKFKILNEAGI 330
>gi|328543146|ref|YP_004303255.1| flagellin hook IN motif domain protein [polymorphum gilvum
SL003B-26A1]
gi|326412892|gb|ADZ69955.1| Flagellin hook IN motif domain protein [Polymorphum gilvum
SL003B-26A1]
Length = 507
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 74/504 (14%), Positives = 152/504 (30%), Gaps = 56/504 (11%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I + + L+ + VQ+++++GL+V+ A DN + A + + L
Sbjct: 4 NITLSAAVRQNLLTLQTTADLMSGVQNKLATGLKVNSALDNPNSFFTASGLSNRANDLGT 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQLR 120
+ D +G + A G+ ++ T K K + + K + L Q+
Sbjct: 64 LLDDMGQVIQTMKAADEGIQSITKLVETAKAKANQALQTQSQYERKRYAEQYNDLLKQIE 123
Query: 121 ----------------------------------------------------DIARGSSF 128
D+A
Sbjct: 124 DVAKDSSYKGKNLLGGTGNDLTAIFNEDNTSKLTINAVDYTDTTLSQGLNLSDLAEAKGG 183
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
L S T A S S + I D +
Sbjct: 184 AASFQLEGGSASITFLNASSDALSSGSLLSDATGIEVGDVIQLRTAASGGGAGVTGFTNI 243
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
+ N K++ + + + K A+A + ++
Sbjct: 244 TVGANTKVQDLVDQINGVAGVKAEFDEKTGALKITSNDDVYLHNTNASAATPAPADMVSV 303
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
A + T S + +G+ +I + T K+ +
Sbjct: 304 TSSNFTAASQLLTGSASYAVGDILTLEDGNGYELGSLEITDKTTVKDLTDFINDFNGVKA 363
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA--YNEKLAMEEMVS 366
+ G+T TL ++ + + + +++
Sbjct: 364 SFSGSTGKITIESDVTLGLTSTNTNNFNASTFTADSDGVNVTAVQDSGFATDNEINKVID 423
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
++ + + A + G+ S + +++++ K M + +++G G+L AD E L ALQ
Sbjct: 424 RLNNALSNLRSQASEFGTNLSTVEIRQNYTKKMINTLQEGAGKLTLADTNQEGANLLALQ 483
Query: 427 TQQQLAVQALSIVNNSTARILSLF 450
T+QQLA +LS + + +LSLF
Sbjct: 484 TRQQLASTSLSFASQADQTVLSLF 507
>gi|87242348|gb|ABD33713.1| flagellin [Bacillus thuringiensis serovar jinghongiensis]
Length = 324
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 71/186 (38%), Gaps = 3/186 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ LS ++ G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLSVAANNTQDGMSLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++ E + L+ Q+ IA + FN +N L +D
Sbjct: 61 NSVSNILLRMRDIANQSANGTNTAENQGALNKEFSALKEQITYIADNTQFNDKNLLNSDQ 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
++ S I + +T + + T +
Sbjct: 121 QIKIQTLDSSDGQKQIAIELKGTTLTDLGISDLSIEDAVSPDMKATTKAINEFVASYGAA 180
Query: 199 EPQVLK 204
+
Sbjct: 181 TDDTSR 186
Score = 66.3 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/322 (11%), Positives = 90/322 (27%), Gaps = 3/322 (0%)
Query: 115 LQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
+ + + ++ G N + L +T A+ S ++ +
Sbjct: 3 MSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLSVAANNTQDGMSLIRTADSAMNS 62
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
V + + + + + K+ + +F + +
Sbjct: 63 VSNILLRMRDIANQSANGTNTAENQGALNKEFSALKEQITYIADNTQFNDKNLLNSDQQI 122
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
T D + G I + L S S + S AT + A T
Sbjct: 123 KIQTLDSSDGQKQIAIELKGTTLTDLGISDLSIEDAVSPDMKATTKAINEFVASYGAATD 182
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA 354
++ + + S K + D + + A+
Sbjct: 183 DTSRKAVVKNVTDNFNKIKSQLDSTKVSEIEAEIKKIDTAKDGADTGNAAALKAVADKFT 242
Query: 355 YNE---KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ V ID+ +K +G+ +R+ + +K ++ ++
Sbjct: 243 EATKDIAPKTLKAVEKIDSALKTIADNRATLGATLNRLDFNVNNLKSQSASMASAASQIE 302
Query: 412 DADMASESTRLSALQTQQQLAV 433
DADMA E + ++ + + +
Sbjct: 303 DADMAKEMSEMTKFKILNEAGI 324
>gi|328545498|ref|YP_004305607.1| flagellin-like protein [polymorphum gilvum SL003B-26A1]
gi|326415239|gb|ADZ72302.1| Flagellin-like protein [Polymorphum gilvum SL003B-26A1]
Length = 302
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 78/205 (38%), Positives = 104/205 (50%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+S++TN SAM+A Q L N L Q R+S+G RV+ A DNAAYWSIA M+SDN AL
Sbjct: 1 MSSLMTNASAMTALQTLSATNKALAETQSRISTGYRVATAEDNAAYWSIATTMRSDNMAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+GLG++ +D M +D+++ IK K+ A + G D IQ EIT LQ LR
Sbjct: 61 SAVEDALGLGAATLDTMYTAMDSTVDLVNEIKAKLVAARQPGVDRGKIQEEITALQDNLR 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNGENWL D + + KSV+GSF R E
Sbjct: 121 SIADSAVFNGENWLSVDSSDAAYNATKSVVGSFSRQGGAITIEKIDIDITRTELYDDADQ 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ ++ +
Sbjct: 181 SGILDKAQANGNTVATINIAALTDS 205
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 53/137 (38%), Positives = 77/137 (56%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ D+ + + I A TD+ + +E M+S +D +
Sbjct: 166 DIDITRTELYDDADQSGILDKAQANGNTVATINIAALTDSAADLTTLEGMISDVDDALGE 225
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
T AA +G+ R+ LQ +FI + DA+++G+G+LVDADM +ESTRL ALQ QQQL +Q
Sbjct: 226 ITDAATSLGAAKRRVELQREFISALTDALDRGIGQLVDADMNAESTRLQALQVQQQLGIQ 285
Query: 435 ALSIVNNSTARILSLFR 451
ALSI N+S+ ILSLFR
Sbjct: 286 ALSIANSSSQNILSLFR 302
>gi|209547936|ref|YP_002279853.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533692|gb|ACI53627.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 301
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 84/226 (37%), Positives = 114/226 (50%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN SA +A Q LR +N L Q+ VSSG RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNTSAQAALQTLRSVNQGLNQTQNHVSSGYRVEKASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+G+G++KVD A M AIDV+ IK K+ A E G D +Q EI QLQ QL+
Sbjct: 61 SAVSDALGVGAAKVDTAYTAMDSAIDVVGDIKAKLVAATENGVDKAKVQEEIGQLQEQLK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ +SFNGENW+ G+ + + GS + + + + +
Sbjct: 121 SIAQSASFNGENWVAGADGTKSVVSSFVRDGSNAVSVTTTDYVLDDGSAGNVLFGMSNGT 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + + + + + T K T
Sbjct: 181 VETSSGILGTSNGATGSIYSMDITNFTAGQIQTALTNVEAALKSMT 226
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/105 (43%), Positives = 72/105 (68%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ ++ ++ ++ ++ +K T+A +GS+SSRI Q+ F+ + D+++ G
Sbjct: 197 SIYSMDITNFTAGQIQTALTNVEAALKSMTSAGAALGSLSSRIDSQDSFVSALSDSIDSG 256
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
VGRLVDA+M ES++LSALQTQQQLA+Q+LSI N+S+ ILSLFR
Sbjct: 257 VGRLVDANMEEESSKLSALQTQQQLAIQSLSIANSSSQNILSLFR 301
>gi|149912824|ref|ZP_01901358.1| flagellin-like protein [Roseobacter sp. AzwK-3b]
gi|149813230|gb|EDM73056.1| flagellin-like protein [Roseobacter sp. AzwK-3b]
Length = 292
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 54/139 (38%), Positives = 86/139 (61%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+SAM A Q L+ +N NL Q+ +S+G + A DN+A W+I+++M+SD
Sbjct: 1 MSSILTNNSAMVALQTLQSVNKNLAKTQNMISTGKEIGQAKDNSAIWAISKVMESDVTGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+AV DA+ LG S V +A AG + +++++ +K ++ A D + +++ L+ Q+
Sbjct: 61 NAVKDALALGESTVAVAAAGAEQIVNLLNDMKERVVAATGSNVDHDKLTADVDALKEQIG 120
Query: 121 DIARGSSFNGENWLRTDLG 139
I RGS FNG N L T G
Sbjct: 121 AIIRGSQFNGSNLLDTAGG 139
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ A + ++ ++T I+ A A +G+ + R+ Q +F+ + DA+ G
Sbjct: 188 ANILGDIDVSSATAADTSLTALETHIQSAIDGAAALGASAKRLSDQSEFVGKVSDAMVSG 247
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+G LVD +M S RL ALQ QQQLA Q+L+I N + IL LFR
Sbjct: 248 MGALVDTNMEEASARLQALQVQQQLATQSLTIANQAPQAILQLFR 292
>gi|229138459|ref|ZP_04267048.1| Flagellin [Bacillus cereus BDRD-ST26]
gi|228644996|gb|EEL01239.1| Flagellin [Bacillus cereus BDRD-ST26]
Length = 269
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 60/169 (35%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++A Q L + + V + +++G ++++A+DN A +I M + ++
Sbjct: 6 IGTNVLSLNARQSLYENEKRMNVAMEHLATGKKLNNASDNPANIAIVTRMHARASSMRVA 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+A + +V+ +++ + S+ E L Q+
Sbjct: 66 IRNNEDAISMLRTAEAALQTVTNVLQRMRDLAVQSANDTNSNKNRDSLNKEFQSLTEQIG 125
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + + T + Q
Sbjct: 126 YIDETTDFNDLSVFDGQNRTVTLDDIGHTVNVTKHIPPSPTQHDINIST 174
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 69/239 (28%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A + A + T + +
Sbjct: 30 MEHLATGKKLNNASDNPANIAIVTRMHARASSMRVAIRNNEDAISMLRTAEAALQTVTNV 89
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ +D + T T + + + L
Sbjct: 90 LQRMRDLAVQSANDTNSNKNRDSLNKEFQSLTEQIGYIDETTDFNDLSVFDGQNRTVTLD 149
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + I+ ++ + +G++ +R+
Sbjct: 150 DIGHTVNVTKHIPPSPTQHDINISTEQEARAAIRKIEEALQNVSLHRADLGAMINRLQFN 209
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 210 IENLNSQSTALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSKLLQ 268
>gi|28211345|ref|NP_782289.1| flagellin [Clostridium tetani E88]
gi|28203785|gb|AAO36226.1| flagellin [Clostridium tetani E88]
Length = 268
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 61/152 (40%), Gaps = 4/152 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N S++ ++ E V ++V++G R++ AAD+A+ +I++ K+ LS
Sbjct: 3 IN-NIYTFSSTNRINKFKDTKEKVTEKVATGRRINRAADDASGLTISESFKAQVRGLSQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
I G S + + + D + I+ D +++ E+ Q++ ++
Sbjct: 62 ERNIQDGMSLLQVVDGALGDITDNLHRIRELCVHSSNGTLVDEDREALNEELKQIKEAIQ 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGS 152
+ FN L+ D + +
Sbjct: 122 TTVENTEFNQIKVLKYDRSLTIQTKDNPYTSM 153
>gi|291534853|emb|CBL07965.1| Flagellin and related hook-associated proteins [Roseburia
intestinalis M50/1]
Length = 291
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 72/179 (40%), Gaps = 3/179 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N +A +A++ L +++SSG +++ A D+AA +I++ M+S L+
Sbjct: 2 VVQHNMTAANANRMLGVTTSAQAKSSEKLSSGYKINRAGDDAAGLTISEKMRSQIRGLNK 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
SD G S + +A+ +S+ ++ + T D +IQSEI QL S++
Sbjct: 62 ASDNAQDGVSLIQVAEGALSETHSILQRMNELATQAANDTNTTADRNAIQSEINQLTSEI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
I + FN N + + S + + + ++
Sbjct: 122 DRIQSTTQFNTMNLIDGSYSGKNLQVGSLSGQSIVISISNMDASSLFGAANTSTSLTTG 180
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 38/97 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + I + I +A +G++ +R+ + + + + R+ D D
Sbjct: 195 ISSYASAGSAMQTIQSAIGLVSAQRSYLGAVQNRLEHTIANLDNISENTQSAESRIRDTD 254
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E S Q L+ N ST +LSL +
Sbjct: 255 MAEEMVAYSKNNILAQAGQSMLAQANQSTQGVLSLLQ 291
>gi|254496895|ref|ZP_05109742.1| flagellar hook-associated protein FlgL [Legionella drancourtii
LLAP12]
gi|254353880|gb|EET12568.1| flagellar hook-associated protein FlgL [Legionella drancourtii
LLAP12]
Length = 410
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/432 (10%), Positives = 128/432 (29%), Gaps = 37/432 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN + L + +Q +++SG++V A+D+ ++ + M +
Sbjct: 3 ISTNQVYQNGLSNLLLQQERVTKLQGQLASGIKVQFASDDPISYAQIEWMSQRVSTTELL 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
S+ +++ +A ++ + + ++ Q+ ++ L +
Sbjct: 63 QKNCMNASNALNLEEAVLTDCTNNLQRLREIQVQASNGTLSQTQRQALSVEVTDILNQL- 121
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F D + A +T + L ++ + + G
Sbjct: 122 --QGFANTKDNDGDYLFAGGQTATEPFTLNSSGQYTYNGDSTQRFQLIAGSLQIAINDPG 179
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + +
Sbjct: 180 DGIFMRIPGGNGTFSVSATATNTGTG---------------------------------- 205
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
++T V AA A + T + + + S+ A T GN + +
Sbjct: 206 SVSTGSVTNSAAYVADDYTISFALNTAGSLVAMVTGAASGNVIPSSGLPDDAPVYQEGMA 265
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + ++ ++ +++ + LN+ + +
Sbjct: 266 LSFNGMSMQVSGMPEPGDTFSVTPAQNVSLFSTIQDMITNLNLPFGTAVEKAATVTENNQ 325
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+++ +D + IGS +++ +D + + + E + L + D A+ +T +
Sbjct: 326 LLAQLDNALDSIIETVSNIGSRLNQVSNSQDSNEDLIETSEITLKFLRETDPAAVATEFN 385
Query: 424 ALQTQQQLAVQA 435
Q A Q+
Sbjct: 386 LQLVNLQAAQQS 397
>gi|87242354|gb|ABD33716.1| flagellin [Bacillus thuringiensis serovar asturiensis]
gi|87242386|gb|ABD33732.1| flagellin [Bacillus thuringiensis serovar indiana]
gi|87242440|gb|ABD33759.1| flagellin [Bacillus thuringiensis serovar argentinensis]
Length = 327
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R++ AAD+AA +IA MK+ G L+ + G S + A + +
Sbjct: 1 AKMSNSMDRLSSGKRINSAADDAAGLAIATRMKAREGGLNVAARNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++ E L+ Q+ IA + FN +N L++
Sbjct: 61 NSVSNILLRMRDLANQSATGTNTTKNQVALNKEFAALKEQITYIADNTQFNDKNLLKSTQ 120
Query: 139 GSSTASIAK 147
++
Sbjct: 121 EIKIQTLDS 129
Score = 74.4 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 34/94 (36%)
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
+V K + V +D + +G+ +R+ + +K
Sbjct: 234 DIVKAFDAIKDTAKIDTTKPSALTAVGQLDAALTKVADNRATLGATLNRLDFNVNNLKSQ 293
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+++ ++ DADMA E + ++ + + +
Sbjct: 294 ENSMAASASQIEDADMAKEMSEMTKFKILNEAGI 327
>gi|241203114|ref|YP_002974210.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240857004|gb|ACS54671.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 301
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 86/226 (38%), Positives = 113/226 (50%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN SA +A Q LR +N NL Q+ VSSG RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNSSAQAALQTLRSVNQNLNNTQNHVSSGYRVEKASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+G+G++KVD A M AIDV+ IK K+ A E G D +Q EI QLQ QL
Sbjct: 61 SAVSDALGVGAAKVDTAYTAMDSAIDVVGDIKAKLVAATENGVDKAKVQEEIGQLQQQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ +SFNGENW+ G+ + + GS + + + S
Sbjct: 121 SIAQSASFNGENWVAGADGTKSVVSSFVRDGSNAVSITTTDYVLDSGSAGNVLFGMSGGS 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + + + ++ T K T
Sbjct: 181 VETSTGILGTSSGATGSIYAMDITSFTAGQIQSALTNVEAALKSMT 226
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 48/105 (45%), Positives = 73/105 (69%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ +A ++ ++ ++ +K T+A +GS+SSRI Q+DF+ + D+++ G
Sbjct: 197 SIYAMDITSFTAGQIQSALTNVEAALKSMTSAGAALGSLSSRIDAQDDFVSALSDSIDSG 256
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
VGRLVDA+M ES++LSALQTQQQLA+Q+LSI N+S+ ILSLFR
Sbjct: 257 VGRLVDANMEEESSKLSALQTQQQLAIQSLSIANSSSQNILSLFR 301
>gi|157101701|gb|ABV23565.1| flagellin B1 [Bacillus thuringiensis serovar fukuokaensis]
Length = 280
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 43/267 (16%), Positives = 89/267 (33%), Gaps = 3/267 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 68 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEID 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++FNG +L +I S S L + +
Sbjct: 128 HIAGKTNFNGNAFLNKGTDGKDITIQLSDASSDTMTIAAIDTKDITTTKLATDGTKKLDA 187
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T LD + + + ++ D + T + S + ++ A+ +
Sbjct: 188 TTAATEITALDTAIQNIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKE 247
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSG 267
+ +
Sbjct: 248 MSNMTKFKILNEAGISMLSQANQTPQM 274
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/234 (13%), Positives = 65/234 (27%)
Query: 218 STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASA 277
+AT A N + + AA + + + ++
Sbjct: 47 DAAGLAIATRMRAKEGGLNVGARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGT 106
Query: 278 TYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
+ S I G TN N + L I +
Sbjct: 107 NNDKDIASMDKEYQALAQEIDHIAGKTNFNGNAFLNKGTDGKDITIQLSDASSDTMTIAA 166
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
+ + + ++ +DT I+ A GS +R+ + +
Sbjct: 167 IDTKDITTTKLATDGTKKLDATTAATEITALDTAIQNIADARATFGSQLNRLDHNLNNVT 226
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ DADMA E + ++ + + + LS N + + L +
Sbjct: 227 SQATNMAASASQIEDADMAKEMSNMTKFKILNEAGISMLSQANQTPQMVSKLLQ 280
>gi|46019721|emb|CAA47619.2| flagellin [Bacillus thuringiensis serovar alesti]
Length = 276
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 3 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 63 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEID 122
Query: 121 DIARGSSFNGENWLRTDLG 139
IA ++FNG +L G
Sbjct: 123 HIADKTNFNGNAFLGGAGG 141
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 35/84 (41%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+DT I+ A GS +R+ + + + ++ DADMA E + ++ +
Sbjct: 193 LDTAIQEIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKI 252
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
+ + LS N + + L +
Sbjct: 253 LNEAGISMLSQANQTPQMVSKLLQ 276
>gi|306516617|gb|ADM96197.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 77/203 (37%), Gaps = 3/203 (1%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 TNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAIS 63
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDI 122
+ A M + + ++ TIK K T + G +Q++I +L +L +I
Sbjct: 64 NGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNI 123
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A +SFNG+ L + + I S + + + +
Sbjct: 124 ANTTSFNGKQLLSGNFINQEFQIGASSNQTVKASIGATQSSKIGLTRFETGSRISVGGEV 183
Query: 183 GTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 184 QFTLKNYNGIDDFKFQKVVISTS 206
>gi|15616182|ref|NP_244487.1| flagellar hook-associated protein 3 (HAP3) [Bacillus halodurans
C-125]
gi|10176244|dbj|BAB07339.1| flagellar hook-associated protein 3 (HAP3) [Bacillus halodurans
C-125]
Length = 395
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/426 (10%), Positives = 111/426 (26%), Gaps = 53/426 (12%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A ++ + + L +QD++S+G R++ A+ + ++ + +
Sbjct: 9 AGNSLRHISQGYMRLGELQDQLSTGKRITRASQDPVVAMKGIRYRTQVAEVEQFKRNLRE 68
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFN 129
+ +D A A + +A D ++ I T + + ++R +
Sbjct: 69 VYNWMDTADAALGEATDALARIHELATQAANDTYEETQRANIA----KEIRQL------- 117
Query: 130 GENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGL 189
N K I + + + +
Sbjct: 118 --------------------YEHLQSIANTKNSGKYIFNGTNTTNPPIVAPERMDLGFAH 157
Query: 190 LDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIP 249
L +++ D Y + + + FD+
Sbjct: 158 LLEPGTDLQTVEIVYDGQTYHY------VGENADGHLVFQDVRQMNSLPFDETDSDEFNE 211
Query: 250 VPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+S + AA +R+ + + R + V
Sbjct: 212 KAFQLVIDPDLGRITSSQPNVNTGAAETKNVRLNDVVVADREAVSFNTQRVEIELLKGVK 271
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
NT+ + L K ++ + +
Sbjct: 272 IPVNTNPTNVFNNALFGDILRLEKALEDPSVSGA----------------ELTAYIDNFT 315
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
I TA ++G+ +R+ + E I ++ + D D+ L+ ++
Sbjct: 316 KHIDQVTAERAELGARVNRVEMLESRILQQEITAKRIMSDNEDVDLEKVIIDLTIQESVH 375
Query: 430 QLAVQA 435
+ A+
Sbjct: 376 RAALAV 381
>gi|306516567|gb|ADM96172.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 77/205 (37%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++ + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 2 INTNGAALNDKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I S + + + S
Sbjct: 122 NIANTTSFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGGRISSSG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 182 EVQFTLKNYNGIDDFQFQKVVISTS 206
>gi|296157496|ref|ZP_06840331.1| flagellin domain protein [Burkholderia sp. Ch1-1]
gi|295892268|gb|EFG72051.1| flagellin domain protein [Burkholderia sp. Ch1-1]
Length = 381
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 52/336 (15%), Positives = 104/336 (30%), Gaps = 3/336 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +I+ M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQSALSQAITRLSSGKRINSAADDAAGLAISTRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A + +S + I+ +D ++Q E++ +
Sbjct: 61 NQGVSNANDGVSMIQTASSALSSLTSSLQRIRQLAVQASTGSLSSSDQAALQKEVSAQIA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG N L GS T + +V + D + + I L +
Sbjct: 121 EVNRIASQTTYNGTNILDGSAGSVTFQVGANVGQTISLDLSQSMSAAKIGGGLVQTGQTV 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ G VL D + +A + A
Sbjct: 181 GTIAVSLGATGAYTSTGATITSINVLSDGKGGYTFTDQNNTAITSGVANAIFSAGTGAGT 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ A+ + + + + + + + + A
Sbjct: 241 GTAVTNLTISSAALPTTGAASSAAVASVAQINAINNPPTVSGLDISTVTGANEAMVSIDN 300
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
T + + S +S
Sbjct: 301 ALQTVNTLQAALGAAQNRFTAISTSQQAESTDLSSA 336
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/373 (8%), Positives = 91/373 (24%)
Query: 79 AGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ ++ + A + + + + + +
Sbjct: 9 NSLVAQQNLNGSQSALSQAITRLSSGKRINSAADDAAGLAISTRMQTQINGLNQGVSNAN 68
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ S S + +++ + + ++ + + N
Sbjct: 69 DGVSMIQTASSALSSLTSSLQRIRQLAVQASTGSLSSSDQAALQKEVSAQIAEVNRIASQ 128
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
+I + + + A V A
Sbjct: 129 TTYNGTNILDGSAGSVTFQVGANVGQTISLDLSQSMSAAKIGGGLVQTGQTVGTIAVSLG 188
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
++G+ S+ + + + + +
Sbjct: 189 ATGAYTSTGATITSINVLSDGKGGYTFTDQNNTAITSGVANAIFSAGTGAGTGTAVTNLT 248
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ + + + S + +N + + E + ID ++
Sbjct: 249 ISSAALPTTGAASSAAVASVAQINAINNPPTVSGLDISTVTGANEAMVSIDNALQTVNTL 308
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+G+ +R + + ++ DA+ A E+ LS Q QQ + L+
Sbjct: 309 QAALGAAQNRFTAISTSQQAESTDLSSAQSQITDANFAQETANLSKAQVLQQAGISVLAQ 368
Query: 439 VNNSTARILSLFR 451
N++ ++L L +
Sbjct: 369 ANSNPQQVLKLLQ 381
>gi|332305622|ref|YP_004433473.1| flagellar hook-associated protein 3 [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332172951|gb|AEE22205.1| flagellar hook-associated protein 3 [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 408
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/421 (9%), Positives = 102/421 (24%), Gaps = 40/421 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + D +L VQ ++S+G ++ +D+ + + + ++
Sbjct: 3 ISTGQLYDRSIRAVLDNQDDLSDVQQQLSTGKKLLRPSDDPVGSAQVIRLTEEIDLINQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ L ++ ++ + + D + + + D ++ ++ I
Sbjct: 63 NKNNNLLTNSIEQEETILGNVTDNIQRARQLMIQAGNGILDVDDRKAIAIEIGQIRDQIF 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ N G +A+ A S + ++ T L + G
Sbjct: 123 DAMNSQSANGEYIFAGYQSATPAFSYTAGASGNKYAFEGDEGLNEIRISNTFSLAMNNSG 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + ++ + + A + A+
Sbjct: 183 QTVFEDVYARLDSQITSSSGVASASTRISTQNEFDQFHSQNYDPVVAANNEFQISISAAE 242
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ V A SG + + + KN
Sbjct: 243 QVTITNVGTGAVVGTQPFISGEPFEFKGQEFTIEGVVGDTVNYALQKPEKKNIAE----- 297
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
N N + A+ +
Sbjct: 298 -----------------------------------TLNDFYNSLNDENISDQDYAQAISD 322
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ +D + + +G + + + + + + D A + LS
Sbjct: 323 ALIGVDNSLTSIADSISLLGGKLNVAQSVFASNLDLEISNKTARANIEEVDYAEAVSELS 382
Query: 424 A 424
Sbjct: 383 K 383
>gi|116250490|ref|YP_766328.1| flagellin A protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115255138|emb|CAK06212.1| flagellin, major subunit of flagellum [Rhizobium leguminosarum bv.
viciae 3841]
Length = 301
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 87/226 (38%), Positives = 113/226 (50%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN SA +A Q LR +N NL Q+ VSSG RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNSSAQAALQTLRSVNQNLNNTQNHVSSGYRVEKASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+G+G++KVD A M AIDV+ IK K+ A E G D +Q EI QLQ QL
Sbjct: 61 SAVSDALGVGAAKVDTAYTAMDSAIDVVGDIKAKLVAATENGVDKAKVQEEIGQLQQQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ +SFNGENW+ G+ + + GS I + + S
Sbjct: 121 SIAQSASFNGENWVAGADGTKSVVSSFVRDGSNAVSITTTDYILDSGSAGNVLFGMSGGS 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + + + ++ T K T
Sbjct: 181 VETSTGILGTSTGATGSIYAMDITSFTSGQIQSALTNVEAALKAMT 226
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 49/113 (43%), Positives = 74/113 (65%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ + +A ++ ++ ++ +K T+A +GS+SSRI Q+DF+
Sbjct: 189 GTSTGATGSIYAMDITSFTSGQIQSALTNVEAALKAMTSAGAALGSLSSRIDAQDDFVSA 248
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D+++ GVGRLVDA+M ES+RLSALQTQQQLA+Q+LSI N+S+ ILSLFR
Sbjct: 249 LSDSIDSGVGRLVDANMEEESSRLSALQTQQQLAIQSLSIANSSSQNILSLFR 301
>gi|15895479|ref|NP_348828.1| flagellin [Clostridium acetobutylicum ATCC 824]
gi|15025208|gb|AAK80168.1|AE007721_8 Flagellin [Clostridium acetobutylicum ATCC 824]
gi|325509626|gb|ADZ21262.1| Flagellin [Clostridium acetobutylicum EA 2018]
Length = 425
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 40/421 (9%), Positives = 120/421 (28%), Gaps = 23/421 (5%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ N+ +Q +++SG ++ +DN + + + +D S + I
Sbjct: 13 LTDMNTNLQNMRDIQSQLTSGKKIRKPSDNPYVATKSMQLNTDISINSQYNTNINNTIYW 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
++ +++A +++ IK + + G S +L ++ + +
Sbjct: 73 LNQTDTALNQAGNIVQRIKELLISAGNGGYTQDQRDSIKAELNQRISEFS-------NVI 125
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
+ G + ++ + + + +++
Sbjct: 126 NSSFSGQYLFGGTRGNEKPLDIINSASGNKYLMYSNQSIDLPVASGASNVASLASGCGDL 185
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
++ + + K+A++S K + ++ + L
Sbjct: 186 DIRLGSGSTVQLQINNGDSIQNILDGINSKIASSSSLKGKISAISYVKGNQTYIRVTALS 245
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+ + + S S ++ +T + G
Sbjct: 246 DKDITITSGTNITALSSFKNQYIGVDKINQISKDLSVEISQGVLTQYSVNATEIMNYKGV 305
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ ++ D+ ++ S + LN +D ++
Sbjct: 306 SASGIEKSYDLRQVFSDIVTDLSSNSGVSNLNTKDA----------------EAVDALLE 349
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G+ +R+ + + + + D D+ + +ALQT ++
Sbjct: 350 NILAIRSTVGASQNRMDSAQKNNQENNYNMTLILSNTEDTDITESTMNYAALQTVYLASL 409
Query: 434 Q 434
Q
Sbjct: 410 Q 410
>gi|306516571|gb|ADM96174.1| FlaA [Campylobacter coli]
Length = 206
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 77/204 (37%), Gaps = 3/204 (1%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 3 NTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAI 62
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ A M + + ++ TIK K T + G +Q++I +L +L +
Sbjct: 63 SNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDN 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA +SFNG+ L + + I S + + + S
Sbjct: 123 IANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSGE 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 183 VQFTLKNYNGIDDFQFQKVVISTS 206
>gi|306516635|gb|ADM96206.1| FlaA [Campylobacter jejuni]
Length = 206
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 41/206 (19%), Positives = 79/206 (38%), Gaps = 3/206 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 1 TLNTNGAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQ 60
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 61 AISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEEL 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+IA +SFNG+ L + + I S + + + S
Sbjct: 121 DNIANTTSFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGGRISSS 180
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 181 GEVQFTLKNYNGIDDFQFQKVVISTS 206
>gi|109899395|ref|YP_662650.1| flagellar hook-associated protein FlgL [Pseudoalteromonas atlantica
T6c]
gi|109701676|gb|ABG41596.1| flagellar hook-associated protein 3 [Pseudoalteromonas atlantica
T6c]
Length = 408
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 37/421 (8%), Positives = 103/421 (24%), Gaps = 40/421 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + D +L VQ ++S+G ++ +D+ + + + ++
Sbjct: 3 ISTGQLYDRSIRAVLDNQDDLSDVQQQLSTGKKLLRPSDDPVGSAQVIRLTEEIDLIAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ L ++ ++ + + D + + + D + ++ I
Sbjct: 63 NKNNNLLTNSIEQEETILGNVTDNIQRARQLMIQAGNGILDVNDRNAISIEIGQIRDQIF 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ N G +++ A S + ++ T L + G
Sbjct: 123 DAMNSQSANGEYIFAGYQSSTPAFSYTAGAAGNKYVFEGDEGLNDIRISNTFSLAMNNSG 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + ++ + A + +
Sbjct: 183 QTVFEDVYARLDSQITSTSGVASASTRISAQSEFDQFHKQNYDPVTPANNEYQISITGVD 242
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ V TSG
Sbjct: 243 EVTITNVGTGTVVGTQPYTSGEP------------------------------------- 265
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ T + + K+ + N R N + + A+ +
Sbjct: 266 ---FEFQGQEFTIEGAVGDTVNYTLQKPEKKNIAETLNDFYNSLRDENISDGDYEQAISD 322
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ +D + + +G + + + + + + D A + LS
Sbjct: 323 ALIGVDNSLTSIADSISLLGGKLNVAQSVFASNLDLEISNKTARANIEEVDYAEAVSELS 382
Query: 424 A 424
Sbjct: 383 K 383
>gi|319944154|ref|ZP_08018431.1| flagellin [Lautropia mirabilis ATCC 51599]
gi|319742584|gb|EFV94994.1| flagellin [Lautropia mirabilis ATCC 51599]
Length = 118
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 42/105 (40%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+A D A + +D + A + G+ +R +++ +
Sbjct: 14 GNNAKPDGIATVTAASAALGKLDDMLALVNAKRAEFGATQNRFEAVIQTLQVSAENQTAA 73
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R++DAD ASE+ L+ Q QQ LS N+ +LSL R
Sbjct: 74 RSRIMDADFASETAALTRAQVLQQAGTSMLSQANSLPNNVLSLLR 118
>gi|297618058|ref|YP_003703217.1| flagellin domain protein [Syntrophothermus lipocalidus DSM 12680]
gi|297145895|gb|ADI02652.1| flagellin domain protein [Syntrophothermus lipocalidus DSM 12680]
Length = 79
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 31/76 (40%)
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+A ++G+I +R+ + + +++ R+ D DMA E + QQ
Sbjct: 2 VSAERARLGAIQNRLEHTINNLGTALESLTAAESRIRDVDMAREMMEFTKNNILQQAGTA 61
Query: 435 ALSIVNNSTARILSLF 450
L+ N +L L
Sbjct: 62 MLAQANQQPQSVLQLL 77
>gi|163939570|ref|YP_001644454.1| flagellin domain-containing protein [Bacillus weihenstephanensis
KBAB4]
gi|163861767|gb|ABY42826.1| flagellin domain protein [Bacillus weihenstephanensis KBAB4]
Length = 278
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 44/272 (16%), Positives = 81/272 (29%), Gaps = 3/272 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 3 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 63 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++FNG +L + D I T D
Sbjct: 123 HIADKTNFNGNAFLNKGTNPGEGKDITIQLSDASSDTMTIAAIDTKDITTTKLATDGTKK 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D T + E + S + AT A
Sbjct: 183 LDATTAATEITALDTAIQEIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDADM 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ + + + S
Sbjct: 243 AKEMSNMTKFKILNEAGISMLSQANQTPQMVS 274
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 35/84 (41%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+DT I+ A GS +R+ + + + ++ DADMA E + ++ +
Sbjct: 195 LDTAIQEIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKI 254
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
+ + LS N + + L +
Sbjct: 255 LNEAGISMLSQANQTPQMVSKLLQ 278
>gi|134300274|ref|YP_001113770.1| flagellar hook-associated protein 3 [Desulfotomaculum reducens
MI-1]
gi|134052974|gb|ABO50945.1| flagellar hook-associated protein 3 [Desulfotomaculum reducens
MI-1]
Length = 438
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 43/432 (9%), Positives = 123/432 (28%), Gaps = 11/432 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M + T+ + +++ Q++ S+G ++ +D+ + S + + +
Sbjct: 1 MLRVSTSLLGNNLRNYIQNNLQRAAKYQEQSSTGKTINRPSDSPSQISYLMSVNATLISN 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S I G + ++ + + + ++ K + G + + Q+ Q+
Sbjct: 61 EQYSRNIKDGLAYLNQSDSALDTMGKLLQDAKVEANKGANGTLTPEDRNAIAEQIDRQID 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + LG + D +I ++
Sbjct: 121 AMVD--------MANSALGGKYLFAGRKNGQPPFYRDPDSGEIYYRGDTNLVSREIIFGY 172
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ G+ D V+ K + + K SG D
Sbjct: 173 SYEVVAAGVADNYITGTVDLSQGKVLKAEDMTFKVALDENNVKEIDLSGYISPGFRKFDD 232
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ G + + + + + + +TK T+
Sbjct: 233 IKNAMQQALDDNFGTQTIAVDDDGKGHIVLQANNDATAFKVLSSDPLD---STKQGHTTF 289
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G S + V + LD + +++ +++ N+ A
Sbjct: 290 FGGERSVINGVFGKLASSTNPANQLDDPMNPGQKMTKVVGGPFEVLSKLVTNLRNNDSQA 349
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + + ++ +G+ + + +D + ++ + + AD+ +
Sbjct: 350 VTDSLKDLENAHDDMLKQRVGVGARTRHLEAVQDQLDDQEIKLKSILVDVQGADITKLTI 409
Query: 421 RLSALQTQQQLA 432
++ Q Q +
Sbjct: 410 EVAQNQLVHQAS 421
>gi|229109215|ref|ZP_04238814.1| Flagellin [Bacillus cereus Rock1-15]
gi|228674225|gb|EEL29470.1| Flagellin [Bacillus cereus Rock1-15]
Length = 266
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 58/169 (34%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + ++ V + +++G ++++A+DN A I M + +
Sbjct: 3 IGTNVLSMNARQWLYENEKHMNVAMEHLATGKKLNNASDNPANIVIVTRMHARANGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDAISMLRTAEATLQTVTNILQRMRDLAVQSANSTNSNKNRHSLNKEFQFLAEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T + Q
Sbjct: 123 YIGETTEFNDLSVFDGQNRPVTLDDIGHTVHISKSIPPSPTQHDIKIST 171
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 25/257 (9%), Positives = 74/257 (28%)
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ + ++ + KK A+ + A + +A G+
Sbjct: 9 SMNARQWLYENEKHMNVAMEHLATGKKLNNASDNPANIVIVTRMHARANGMRVAIRNNED 68
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
A + T T + + + + + T
Sbjct: 69 AISMLRTAEATLQTVTNILQRMRDLAVQSANSTNSNKNRHSLNKEFQFLAEQIGYIGETT 128
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + + L + + ++ + + + + + I+ ++
Sbjct: 129 EFNDLSVFDGQNRPVTLDDIGHTVHISKSIPPSPTQHDIKISTEQEARAAIRKIEEALQS 188
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ +G++ + + + + A+ R+ DADMA E + + ++A+
Sbjct: 189 VSLHRADLGAMINHLQFNIENLNSQGMALTDAASRIEDADMAQEMSDFLKFKLLTEVALS 248
Query: 435 ALSIVNNSTARILSLFR 451
+S N + L +
Sbjct: 249 MVSQANQIPQMVSKLLQ 265
>gi|218528289|ref|YP_002419105.1| hypothetical protein Mchl_0238 [Methylobacterium chloromethanicum
CM4]
gi|218520592|gb|ACK81177.1| conserved hypothetical protein; putative flagellin C-ter domain
[Methylobacterium chloromethanicum CM4]
Length = 432
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 67/450 (14%), Positives = 130/450 (28%), Gaps = 20/450 (4%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+SI + + L+D Q R+++G +V+ A DN + AQ + + ALS
Sbjct: 3 SSITLSAATRQNLLSLQDTAGLAATNQGRLATGKKVNSALDNPVNYFTAQSLSDRSSALS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
+ D I G + A G SK D++ ++++ I ++ + +
Sbjct: 63 GLLDGISNGIQTIQAANTGASKIADLVKSLQSTIAQAQSDAAANRPTVTGSALATAAEAK 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
S + ++ S + + + T
Sbjct: 123 ATGTSLRTTVMNMALGGTAARPSDTATGSLGLTGAALAVTLTDGENTFTRALTPTSTVGD 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ ++ + T + A
Sbjct: 183 LVNAINASGLATAAVDDAGKLTVTGNSGTLKVGVGGGADADAALTKAKAGDGNDELGLTA 242
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + +A + A + N + + +
Sbjct: 243 AAYTTGLTNDKTSAARTALASQFNDLRTQIDQIAKDSGFNGTNLLGGDALSVIFNEKTGA 302
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ T+A T + + T +
Sbjct: 303 DQSKLTIAGRKLTADSLGVDKAVNG--------------------TAGTGEFNIQTDKGL 342
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
M + T + + GS S + +++DF K + + ++ G LV+ADM E+
Sbjct: 343 AAMQDTLKTALASLKSLQSGFGSNLSNVQVRQDFTKQVGNILDTGSANLVNADMNEEAAN 402
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
AL T+Q L V ALS+ N + IL L R
Sbjct: 403 SQALSTRQSLGVSALSLANQANQGILQLLR 432
>gi|254294681|ref|YP_003060704.1| flagellin domain protein [Hirschia baltica ATCC 49814]
gi|254043212|gb|ACT60007.1| flagellin domain protein [Hirschia baltica ATCC 49814]
Length = 273
Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 3/206 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN AM A Q+L N +L V Q+R+++GL+V+ A D+ A ++IAQ M+++ +L
Sbjct: 1 MVSVNTNSGAMIALQQLNKTNSSLAVSQERINTGLKVAGAKDDGAIFAIAQGMRAEVASL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQS 117
V +++ S VDIA + + D++ +K K + + L+
Sbjct: 61 GVVLESLDRARSVVDIAISAHEVSNDLLIEMKEKALGASDKTLSTEQRDAYNEDYLALRK 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
QL I +SFN N L + G S + A + + D L P+ +
Sbjct: 121 QLFAIGEEASFNDVNLLTSSAGFSVLANADGSNTISVNAEVVVATADQWDLSLIPDIETV 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVL 203
+ D + G
Sbjct: 181 TKAADAIGQLGRAINGTNRIAAKIGT 206
Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 52/94 (55%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + + I A KIG+ + + L F+ + D++ G+G LVDAD+A
Sbjct: 179 TVTKAADAIGQLGRAINGTNRIAAKIGTAAKALDLHSVFVNKLTDSLTDGIGNLVDADLA 238
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
ES +L +LQT+QQL VQALSI N S+ LS F
Sbjct: 239 KESAKLQSLQTKQQLGVQALSIANQSSGLALSFF 272
>gi|328542112|ref|YP_004302221.1| flagellin-like protein [polymorphum gilvum SL003B-26A1]
gi|326411862|gb|ADZ68925.1| Flagellin-like protein [Polymorphum gilvum SL003B-26A1]
Length = 371
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 42/371 (11%), Positives = 97/371 (26%)
Query: 81 MSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGS 140
M +M + + S ++ S + + LR + S D G
Sbjct: 1 MKSQSSLMKLSSGSRISSAKDDAASLTVASGLKLDIASLRAASANISQAASMLQIADGGL 60
Query: 141 STASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
+ + T +++ E L + + +
Sbjct: 61 GQIGDILGRMQTLASTAQSDQISNTERGFINTEYSNLVNEVTRIANATEYNGIELLSGTT 120
Query: 201 QVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPN 260
V ++ + + + L + T + V
Sbjct: 121 GVGASLETNAIGTNVEAADGFVALTFDANKRADGEAVTIAFDENTNVFTVTALDGAGGNA 180
Query: 261 TTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDT 320
+ + A N ++ D N+
Sbjct: 181 LVAQSLDLDDFGGAIPDGQTVDLNFADVGVTIRLSADFDDTAAINANNEVTIQNAAAGQQ 240
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
+ + + + + + + ++ + V+ I+T +
Sbjct: 241 GTQLVFKVGVAATDTITANINGSTAGQLGIDATSVTTRVNADAAVTAIETAQSRINSNRA 300
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
+G++ SR+ + + + +E L D D+A E TR ++ Q Q V L+ N
Sbjct: 301 NLGALMSRLDFANANVGIQIENMEAARSTLQDTDVAEEMTRFTSQQVLVQAGVSMLAQAN 360
Query: 441 NSTARILSLFR 451
A +L L +
Sbjct: 361 QQPALLLRLLQ 371
>gi|87242452|gb|ABD33765.1| flagellin [Bacillus thuringiensis serovar pulsiensis]
Length = 325
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ T+ ++Q E +LQ Q+ IA + FN + L D
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTDTNQAALQKEFGELQKQINYIATNTEFNDKKLLNGDN 120
Query: 139 GSSTASI 145
S
Sbjct: 121 QSIAIQT 127
Score = 67.1 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 33/79 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
KL + +S ID + +G+ +R+ + +K ++ ++ DAD
Sbjct: 247 ATSKLNASQAISAIDAALTKVADNRATLGATLNRLDFNVNNLKSQSASMASAASQIEDAD 306
Query: 415 MASESTRLSALQTQQQLAV 433
MA E + ++ + + +
Sbjct: 307 MAKEMSEMTKFKILNEAGI 325
>gi|119947189|ref|YP_944869.1| flagellin domain-containing protein [Psychromonas ingrahamii 37]
gi|119865793|gb|ABM05270.1| flagellin domain protein [Psychromonas ingrahamii 37]
Length = 345
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 73/197 (37%), Gaps = 3/197 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN++ + L N + +R+S+G R++ A+D+AA I+ +++ +
Sbjct: 3 LSIQTNYANLVGQNTLNKTNADFNTSLERLSTGFRINSASDDAAGLQISNRLEAQGRGMG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G +S++ A+ M + ++ + + T D ++++E L S+
Sbjct: 63 VAMRNAGDATSQMQTAEGAMEEMTNIAYRMSDLATQSANGTASDDDRTAMEAEFQSLASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L + ++ G+ L G A +G+ + + + L
Sbjct: 123 LGSLMENTNMGGQKLLDKTDGVFAAGAISYQVGNTSAETLSVDITAELGEVVTAVGKLAG 182
Query: 179 SSTDGTERYGLLDRNHK 195
S+ +
Sbjct: 183 SAAYIKAYDADIATAAS 199
Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 39/100 (39%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
A + + + + + I A ++G+ +R+ + M + R
Sbjct: 244 AGGFTLSSQDTATKAIDTLSGFITDIGATRSQLGANINRLDHTMANLASMSENTAAAKSR 303
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
++D DMA+ES+ +S Q Q Q LS +SL
Sbjct: 304 IMDTDMAAESSAMSKNQMLMQAGAQVLSSTKMVPQLAMSL 343
>gi|228900342|ref|ZP_04064571.1| Flagellin [Bacillus thuringiensis IBL 4222]
gi|228859229|gb|EEN03660.1| Flagellin [Bacillus thuringiensis IBL 4222]
Length = 274
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 3/138 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + DR+SSG R++ A+D+AA +IA MK+ G L+ G
Sbjct: 1 MRTQEYMRQNQAKMSNAMDRLSSGKRINSASDDAAGLAIATRMKAREGGLNVAGRNTQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSS 127
S + A + ++ +++ +++ + S+Q E QL Q+ IA+ +
Sbjct: 61 MSLIRTADSALNSVSNILLRMRDLANQSANGTNTKGNQASLQKEFAQLTEQIDYIAKNTQ 120
Query: 128 FNGENWLRTDLGSSTASI 145
FN + L T
Sbjct: 121 FNDQQLLGTADKKIKIQT 138
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 39/97 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ++ + ID I +G+ +R + +K ++ ++ DAD
Sbjct: 178 AADPTSAKQAIDAIDAAITTVAGQRATLGATLNRFEFNANNLKSQETSMADAASQIEDAD 237
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + ++ + + + LS N + + L +
Sbjct: 238 MAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 274
>gi|300086787|gb|ADJ67725.1| FlaB [Borrelia hispanica]
gi|300086795|gb|ADJ67729.1| FlaB [Borrelia hispanica]
Length = 310
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++AS+ NL Q+++SSG R++ A+D+AA +A + + LS S
Sbjct: 1 INASRNNAINVANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKA 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSS 127
+ + + + + V+ +K D SIQ EI QL ++ IA +
Sbjct: 61 INFIQTTEGNLDEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQ 120
Query: 128 FNGENWLRTDLGSSTASIAK 147
+N + L + A+
Sbjct: 121 YNHMHMLSNRSAAEHVKTAE 140
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 31/86 (36%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ T +G+ +R+ + + + ++ ++
Sbjct: 225 SPVNVTTAVDANVSLTKIEDAIRMVTDQRANLGAFQNRLESIKASTEYAIENLKASYAQI 284
Query: 411 VDADMASESTRLSALQTQQQLAVQAL 436
DA M E + Q A+ +
Sbjct: 285 KDAAMTDEIVASTTNSILTQSAMAMI 310
>gi|110349483|gb|ABG73222.1| flagellin [Borrelia persica]
Length = 241
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A++AS+ NL Q+++SSG R++ A+D+AA +A + + LS S
Sbjct: 1 AINASRNNAINVANLSKTQEKLSSGYRINRASDDAAGMGVAGKINAQIRGLSQASRNTSK 60
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGS 126
+ + + +++ ++ +K D SIQ EI QL ++ IA +
Sbjct: 61 AINFIQTTEGNLNEVEQILVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQA 120
Query: 127 SFNGENWLRTDLGSSTASIAK 147
+N + L + A+
Sbjct: 121 QYNQMHMLSNKSAADNVKTAE 141
>gi|327191211|gb|EGE58254.1| putative flagellin protein [Rhizobium etli CNPAF512]
Length = 321
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 84/146 (57%), Positives = 105/146 (71%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN++AM+A Q LR +N +L+ Q RVSSG RV AADNAAYWSIA M+SDN AL
Sbjct: 11 MTSILTNNAAMAALQTLRGVNDSLKDTQGRVSSGYRVEKAADNAAYWSIATTMRSDNLAL 70
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A A M A+DV+S IK KI A E+G D IQ E+ QLQ QL
Sbjct: 71 SAVSDALGLGAAKVDTAYAAMDSALDVVSEIKAKIVAATEKGVDKTKIQQELDQLQEQLL 130
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA+ +SF+GENW+ G+ + +
Sbjct: 131 SIAQSASFSGENWVAGASGTKSVVSS 156
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 52/136 (38%), Positives = 78/136 (57%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
T + S + V + + + + ++ +S I+ +
Sbjct: 185 GMTSTGAIETSSGIIGTAFNGTYGGTVIVMPSIYDLDITGFTQGQLDAALSGIELVLGAM 244
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
TAA +GSIS+RI LQE+F+ +RD+++ G+GRLVDADM ES++LSALQTQQQL +Q+
Sbjct: 245 TAAGSALGSISTRIQLQENFVSGLRDSIDSGIGRLVDADMEEESSKLSALQTQQQLGIQS 304
Query: 436 LSIVNNSTARILSLFR 451
LSI N+S IL+LFR
Sbjct: 305 LSIANSSAQNILTLFR 320
>gi|167614799|ref|ZP_02383434.1| flagellin D [Burkholderia thailandensis Bt4]
Length = 286
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 31/240 (12%), Positives = 70/240 (29%)
Query: 212 DASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
++ + + AT+ + A +Q A A + +
Sbjct: 47 HLGMGVAFQNTQNATSMLQTAEGAFKEVEQILHRMNALATQAADSAWTQADRDSLQKEYD 106
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
++ I S + + + G + E +
Sbjct: 107 ALGTELKNIVDNTSYGGEKLFVAGASGATGGKLTEKLTFQIGNTSGEVMELDVSTALAAA 166
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
K + + + ++ + + + +IG+ +R+
Sbjct: 167 VKAFGDASQVFGGGASGASGNTDITSISGANALLDNLSAALSAVGSLRAEIGAGQNRLTH 226
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + MRD + GR+ D D ASE+ ++ L QQ L + + +LSL +
Sbjct: 227 IANNLTNMRDNTQDAEGRIRDVDYASETANMTKLNILQQAGGSMLKQASQMSQLVLSLLQ 286
Score = 93.3 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 32/198 (16%), Positives = 66/198 (33%), Gaps = 3/198 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M L +L R+ +G R++ A+D+AA IA +KS + +
Sbjct: 1 MRIQGALGRTQQDLTTSMTRLGTGYRINSASDDAAGLQIATRLKSQHLGMGVAFQNTQNA 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSS 127
+S + A+ + ++ + T + D S+Q E L ++L++I +S
Sbjct: 61 TSMLQTAEGAFKEVEQILHRMNALATQAADSAWTQADRDSLQKEYDALGTELKNIVDNTS 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
+ GE +T + I + +G+V + L ++
Sbjct: 121 YGGEKLFVAGASGATGGKLTEKLTFQIGNTSGEVMELDVSTALAAAVKAFGDASQVFGGG 180
Query: 188 GLLDRNHKIKVEPQVLKD 205
+
Sbjct: 181 ASGASGNTDITSISGANA 198
>gi|220905543|ref|YP_002480855.1| flagellin domain-containing protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869842|gb|ACL50177.1| flagellin domain protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 295
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 78/202 (38%), Gaps = 3/202 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A + L NL R+S+GLR++ AAD+AA +I ++M++D AL
Sbjct: 3 INHNQMATQVANTLTSHYGNLSSSVQRLSTGLRINSAADDAAGLAIRELMRTDIAALQQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A ++ + + +K T I+SE + S++
Sbjct: 63 VRNANDAISLIQTADGALAVIDEKLIRMKELAEQAATGTYDSTQRLMIESEYQAMASEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG + L +L S T + + ++ G + + DYY S+
Sbjct: 123 RIANATDFNGIHLLNGNLSSDTHNGSDLTATGKMKIHFGSMNDSAEDYYYIQIGTSTASA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQV 202
+ + + +
Sbjct: 183 LGVGNQADKTSAAYTVSTQEAA 204
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/200 (14%), Positives = 62/200 (31%)
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
AA ++T AS +D +++SD + A
Sbjct: 94 AEQAATGTYDSTQRLMIESEYQAMASEITRIANATDFNGIHLLNGNLSSDTHNGSDLTAT 153
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
++ + D + V + + + + A ++ + ++
Sbjct: 154 GKMKIHFGSMNDSAEDYYYIQIGTSTASALGVGNQADKTSAAYTVSTQEAAQKALVGLND 213
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ +G++ +R+ + ++ R+ D D+A+E T Q Q
Sbjct: 214 AVVSKDKIRAHLGALQNRLENTISNLTTQTQNLQAAESRISDVDVATEMTAFVRNQILTQ 273
Query: 431 LAVQALSIVNNSTARILSLF 450
AV LS N+ + L
Sbjct: 274 SAVAMLSQANSMPQMAMQLI 293
>gi|87242418|gb|ABD33748.1| flagellin [Bacillus thuringiensis serovar seoulensis]
Length = 337
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 68/184 (36%), Gaps = 3/184 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + +
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARENGLGVAANNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + K++ E + L+ Q+ I++ + FN + L D
Sbjct: 61 NSVSNILLRMRDIANQSANGTNTSDNQKALDKEFSALKEQIDYISKNTEFNDKKLLNGDN 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
S + + + N T+ + T +
Sbjct: 121 KSIAIQTLDNADTTKQININLADSSTSALKIDTLSIEGTGTKTIAITAGDIAADKTNTDA 180
Query: 199 EPQV 202
Sbjct: 181 VGVA 184
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/337 (7%), Positives = 81/337 (24%)
Query: 97 AGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRD 156
A + D S I +A + ++T + +
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARENGLGVAANNTQDGMSLIRTADSAL 60
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
++ + + + ++S + + + +
Sbjct: 61 NSVSNILLRMRDIANQSANGTNTSDNQKALDKEFSALKEQIDYISKNTEFNDKKLLNGDN 120
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
S L N + + + + + + +
Sbjct: 121 KSIAIQTLDNADTTKQININLADSSTSALKIDTLSIEGTGTKTIAITAGDIAADKTNTDA 180
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + +T T+ + ++ N +
Sbjct: 181 VGVAKTALGALTGTSTPAQIKTAVDNFKSAFDKVDKNLMSDAAIKDIKEKIEAYEAAPDL 240
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + T + E + ID + + +G+ +R+ + +
Sbjct: 241 AKAQAIGTAYTAPVAGNITKSSPNASEAIKSIDAALDTIASNRATLGATLNRLDFNVNNL 300
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
K ++ ++ DADMA E + ++ + + +
Sbjct: 301 KSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGI 337
>gi|118402730|emb|CAI26493.1| A-type flagellin [Pseudomonas aeruginosa]
Length = 314
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 53/196 (27%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A T+ + + + + A+A N + T
Sbjct: 119 ATASGTVDIAIGITGGSAVNVKVDMKGNETAEQAAAKIAAAVNDANVGIGAFSDGDTISY 178
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
T S + + +
Sbjct: 179 VSKAGKDGSGAITSAVSGVVIADTGSTGVGTAAGVAPSATAFAKTNDTVAKIDISTAKGA 238
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ V ID IK A +G++ +R + +K + + V GR+ D D A+E+
Sbjct: 239 QSAVLVIDEAIKQIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDFAAETAN 298
Query: 422 LSALQTQQQLAVQALS 437
L+ Q QQ L+
Sbjct: 299 LTKNQVLQQAGTAILA 314
>gi|306516639|gb|ADM96208.1| FlaA [Campylobacter coli]
Length = 206
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 80/205 (39%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN +A++A + L+ R+SSGLR++ AAD+A+ +IA +++ L
Sbjct: 2 VNTNGAALNAKANSDLNSKALDQSLARLSSGLRINSAADDASGMAIADSLRTQASTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ +S + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 INNGNDAASILQTADKAMDEQLKILDTIKVKATQAAQDGQSAKTRAMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I + + T ++ S
Sbjct: 122 NIANTTSFNGKQLLSGGFINQEFQIGAQSNQTIKASIGATQSSKIGVTRFETGTNVVQSG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 182 IASLTIKNYNGIDDFKFQDVVISTS 206
>gi|228920469|ref|ZP_04083814.1| Flagellin [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228839099|gb|EEM84395.1| Flagellin [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 269
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 58/169 (34%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + ++ V + ++ G +++ A+DN A +I M + + A
Sbjct: 6 IGTNVLSMNARQSLYENEKHMNVAIEHLAIGKKLNHASDNPANVAIVTRMHARASGMRAA 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L Q+
Sbjct: 66 IRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSANGTNSNANRHSLNKEFQSLTEQIG 125
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T + Q
Sbjct: 126 YIGETTEFNDLSVFDGQNRPITLDDIGHTVNMTKHIPPSPTQHDIKIST 174
Score = 90.2 bits (221), Expect = 7e-16, Method: Composition-based stats.
Identities = 29/266 (10%), Positives = 81/266 (30%), Gaps = 1/266 (0%)
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+ N Q L + + + A ++ K + A
Sbjct: 3 IMRIGTNVLSMNARQSLYENEKHMNVAIEHLAIGKKLNHASDNPANVAIVTRMHARASGM 62
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
+ + T+ + ++ + + +++ ++S+ +
Sbjct: 63 RAAIRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSANGTNSNANRHSLNKEFQSLTE 122
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD-AYNEKLAMEEMV 365
+ +G T + D +R +I +M D + + +
Sbjct: 123 QIGYIGETTEFNDLSVFDGQNRPITLDDIGHTVNMTKHIPPSPTQHDIKISTEQEARAAI 182
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
I+ ++ + +G++ +R+ + + A+ + DADMA E +
Sbjct: 183 LKIEEALQSVSFHRADLGAMINRLQFNIENLNNQSMALTDAASLIEDADMAQEMSDFLKF 242
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
+ ++A+ +S N + L +
Sbjct: 243 KLLTEVALSMVSQANQIPQMVSKLLQ 268
>gi|52143699|ref|YP_083129.1| flagellin [Bacillus cereus E33L]
gi|51977168|gb|AAU18718.1| flagellin [Bacillus cereus E33L]
Length = 266
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 54/138 (39%), Gaps = 3/138 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A++N A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNHASNNPANIAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDALSMLRTAEAALQTVTNILQRMRDLAVQSANVTNSNKNRNSLNKEFQSLTEQIS 122
Query: 121 DIARGSSFNGENWLRTDL 138
I + FN +
Sbjct: 123 YIGETTEFNDLSVFDGQN 140
Score = 92.9 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 27/239 (11%), Positives = 68/239 (28%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T + +
Sbjct: 27 MEHLATGKKLNHASNNPANIAIVTRMHARASGMRVAIRNNEDALSMLRTAEAALQTVTNI 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + T T + + + L
Sbjct: 87 LQRMRDLAVQSANVTNSNKNRNSLNKEFQSLTEQISYIGETTEFNDLSVFDGQNRPVTLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + I+ ++ + +GS+ +R+
Sbjct: 147 DIGYTVNVTKHTPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGSMMNRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 207 IENLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSKLLQ 265
>gi|82940575|emb|CAJ44298.1| putative Flagellin protein [Rhizobium leguminosarum bv. viciae]
Length = 301
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 84/226 (37%), Positives = 114/226 (50%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN SA +A Q LR +N +L Q+ VSSG RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNTSAQAALQTLRSVNQSLNNTQNHVSSGYRVEKASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+G+G++KVD A M AIDV+ IK K+ A E G D +Q EI QLQ QL
Sbjct: 61 SAVSDALGVGAAKVDTAYTAMDSAIDVVGDIKAKLVAATENGVDKAKVQEEIGQLQQQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I++ +SFNGENW+ G+ + + GS + + + S
Sbjct: 121 SISQSASFNGENWVAGASGTKSVVSSFVRDGSNAVSITTTDYVLDSGSAGNVLFGMSGGS 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + + + + ++ T K T
Sbjct: 181 VETSTGILGTSSGATGSIYAMDITNFTAGQIQSALTNVEAALKAMT 226
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 48/105 (45%), Positives = 73/105 (69%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ +A ++ ++ ++ +K T+A +GS+SSRI Q+DF+ + D+++ G
Sbjct: 197 SIYAMDITNFTAGQIQSALTNVEAALKAMTSAGAALGSLSSRIDAQDDFVSALSDSIDSG 256
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
VGRLVDA+M ES++LSALQTQQQLA+Q+LSI N+S+ ILSLFR
Sbjct: 257 VGRLVDANMEEESSKLSALQTQQQLAIQSLSIANSSSQNILSLFR 301
>gi|300086797|gb|ADJ67730.1| FlaB [Borrelia hispanica]
Length = 310
Score = 100 bits (247), Expect = 7e-19, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++AS+ NL Q+++SSG R++ A+D+AA +A + + LS S
Sbjct: 1 INASRNNAINVANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKA 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSS 127
+ + + + + V+ +K D SIQ EI QL ++ IA +
Sbjct: 61 INFIQTTEGNLDEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQ 120
Query: 128 FNGENWLRTDLGSSTASIAK 147
+N + L + A+
Sbjct: 121 YNHMHMLSNRSAAEHVKTAE 140
Score = 57.1 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 31/86 (36%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ T +G+ +R+ + + + ++ ++
Sbjct: 225 SPVNVTTAVDANVSLTKIEDAIRMVTDQRANLGAFQNRLESIKASTEYAIENLKASYAQI 284
Query: 411 VDADMASESTRLSALQTQQQLAVQAL 436
DA M E + Q A+ +
Sbjct: 285 KDAAMTDEIVASTTNSIWTQSAMAMI 310
>gi|300086801|gb|ADJ67732.1| FlaB [Borrelia duttonii]
Length = 311
Score = 100 bits (247), Expect = 7e-19, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++AS+ NL Q+++SSG R++ A+D+AA +A + + LS S
Sbjct: 1 INASRNNAINVANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKA 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSS 127
+ + + + + V+ +K D SIQ E+ QL ++ IA +
Sbjct: 61 INFIQTTEGNLDEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEVEQLTDEINRIADQAQ 120
Query: 128 FNGENWLRTDLGSSTASIAK 147
+N + L + A+
Sbjct: 121 YNHMHMLSNRSSAEHVRTAE 140
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 31/86 (36%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ T +G+ +R+ + + + ++ ++
Sbjct: 226 SPVNVTTAVDANMSLTKIEDAIRMITDQRANLGAFQNRLESVKASTEYAIENLKASYAQI 285
Query: 411 VDADMASESTRLSALQTQQQLAVQAL 436
DA M E + Q A+ +
Sbjct: 286 KDATMTDEIVASTTNSILTQSAMAMI 311
>gi|297538186|ref|YP_003673955.1| flagellin domain-containing protein [Methylotenera sp. 301]
gi|297257533|gb|ADI29378.1| flagellin domain protein [Methylotenera sp. 301]
Length = 265
Score = 100 bits (247), Expect = 7e-19, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 3/143 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I TN ++++ + L +L R+SSG+R++ + D+AA +IA M S +
Sbjct: 3 SVINTNLNSLNTQRNLSASQSSLSTAMQRLSSGMRINSSKDDAAGLAIATKMDSQIRGQA 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S A+ G++K D + ++ TD ++ +E QL ++
Sbjct: 63 VAIRNANDAISFSQTAEGGLAKQTDALQRMRELAVQSANGTNTSTDQANLDAEYQQLTAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSS 141
+ ++ + FNG T
Sbjct: 123 VTRLSSATKFNGAAVFGTSQTFQ 145
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 40/84 (47%)
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
DT + A K+G+I +R +++ + R++DAD A+E+ LS
Sbjct: 182 DTALASANTERAKLGAIQNRFESVVSNLQVSNENQSAAKSRIMDADFATETANLSRANIL 241
Query: 429 QQLAVQALSIVNNSTARILSLFRG 452
QQ L+ N+S +L+L RG
Sbjct: 242 QQAGTAMLAQANSSPNGVLALLRG 265
>gi|300024599|ref|YP_003757210.1| flagellin domain protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299526420|gb|ADJ24889.1| flagellin domain protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 317
Score = 100 bits (247), Expect = 7e-19, Method: Composition-based stats.
Identities = 83/223 (37%), Positives = 124/223 (55%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI TN +AM+A Q L+ + ++ Q R+S+GLRV+ A+DNAAYWSIA M+SDN AL
Sbjct: 3 MNSINTNVAAMTALQSLQQTSKDMLTTQSRISTGLRVASASDNAAYWSIATSMRSDNAAL 62
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S V DA+GLG V++A M+ +ID++S +K K+ A + G D IQS+IT+LQ+QL+
Sbjct: 63 STVQDALGLGKGTVNVAYTAMNSSIDLVSQMKQKLAAALGPGVDRSKIQSDITELQNQLK 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A +SF+GENWL D ++ + KS++ SF R+ +G V I I + +
Sbjct: 123 GVADSASFSGENWLSVDSSATGYNATKSIVSSFTRNSSGAVSIGYITVDTSKAVLFDAGT 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
G R+ V I + +T +
Sbjct: 183 GTGAGGILDSQRDSAGAVVSTGGTSIMNIDISSLDNSATDQAT 225
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 76/311 (24%), Positives = 120/311 (38%)
Query: 142 TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
++A ++ + + T + + ++ Q
Sbjct: 7 NTNVAAMTALQSLQQTSKDMLTTQSRISTGLRVASASDNAAYWSIATSMRSDNAALSTVQ 66
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
+ + + T L + L AA I + L
Sbjct: 67 DALGLGKGTVNVAYTAMNSSIDLVSQMKQKLAAALGPGVDRSKIQSDITELQNQLKGVAD 126
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
++ SG SV +SAT S + + S T T V
Sbjct: 127 SASFSGENWLSVDSSATGYNATKSIVSSFTRNSSGAVSIGYITVDTSKAVLFDAGTGTGA 186
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
LDS++D + S +NI + ++ ++ + V + + T+AA
Sbjct: 187 GGILDSQRDSAGAVVSTGGTSIMNIDISSLDNSATDQATLSGYVQAVSKALDEMTSAATG 246
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G+ +RI+LQ DF+ +RD++ GV +LVDADM ESTRL ALQ +QQL VQALSI N
Sbjct: 247 LGANQTRINLQSDFVSTLRDSITTGVSQLVDADMNEESTRLQALQVKQQLGVQALSIANQ 306
Query: 442 STARILSLFRG 452
S+ ILSLFRG
Sbjct: 307 SSQNILSLFRG 317
>gi|222112280|ref|YP_002554544.1| flagellar hook-associated protein 3 [Acidovorax ebreus TPSY]
gi|221731724|gb|ACM34544.1| flagellar hook-associated protein 3 [Acidovorax ebreus TPSY]
Length = 420
Score = 100 bits (247), Expect = 7e-19, Method: Composition-based stats.
Identities = 51/457 (11%), Positives = 126/457 (27%), Gaps = 48/457 (10%)
Query: 1 MTS----ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSD 56
M+S + T + + + L +L +Q+ +++G RV +D+ + A+ +
Sbjct: 1 MSSSFYRVSTANMYDATLRNLSARQKSLVDLQENLTAGKRVVRPSDDPVAAAQAERALTR 60
Query: 57 NGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEIT 113
+ A+ + + + A++ + A+ ++ I+ + A D K+ ++I
Sbjct: 61 ISRIQTEQRALDVQRNAIAQAESTLGDAVGLVQEIRQLVVAAGGGALKPEDRKTYANQIQ 120
Query: 114 QLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE 173
L+ QL + NG L + + Q + +
Sbjct: 121 SLREQLTQVINRKDTNGVPLLGALGSALEPFTGPLLSNPDYLFAGLPGQAASGGTSIPTT 180
Query: 174 TVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233
+ R G+ ++ + + + + T + +
Sbjct: 181 VDGHAALMFDPVRDGVYTATVTRGAGSSLVTSAITTSNREALDGAQYALAVNTVTVDPVA 240
Query: 234 AANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATT 293
+ A + +G + + +
Sbjct: 241 GTTVVDYKLTKTAKDGTVTTSNVTTAPVKTGQPIPITINEGPDTVMSFSLTGTPAAGDSV 300
Query: 294 KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD 353
+S ++ + TD
Sbjct: 301 SLQPSSSLM------------------------------------GTIDSAIRGITDATD 324
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ A+ + ++ ID ++ G G + +R +E R D
Sbjct: 325 SVAASQAVGQALANIDAGMERLHNMRGYAGELLNRADRITGDQDKRSIQLEADRSRAEDL 384
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
DM + + A+++ + V + LSLF
Sbjct: 385 DMVQGISDFQNASVGYEAALKSYAQV-----QRLSLF 416
>gi|83858823|ref|ZP_00952345.1| flagellin FljM [Oceanicaulis alexandrii HTCC2633]
gi|83853646|gb|EAP91498.1| flagellin FljM [Oceanicaulis alexandrii HTCC2633]
Length = 275
Score = 100 bits (247), Expect = 7e-19, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +I TN AM A Q L N +L+ VQ R+++GL +S A DN ++IAQ M++D
Sbjct: 1 MATINTNPGAMVALQNLNQTNKDLQQVQQRINTGLAISSAKDNGGVFAIAQSMRADVAGY 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQS 117
AV ++ L S VD+A A D++ +K K AG + ++ + L+
Sbjct: 61 KAVGQSLDLAQSTVDVALAAGEAISDLLVEMKEKALAGADSSLDTASRNALNEDFKALRD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
Q+ I + FNG N + +++A + + + +
Sbjct: 121 QIGTIVANAEFNGTNLINGTQTGGISALANADGSNTLNVGQEIMS 165
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 57/87 (65%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
V+ I+T + A K+G+ S + + + F+ + D++EKG+G LVDAD+A ES RL +
Sbjct: 189 VATIETSLDNLNTALAKLGTGSKSLEVHKTFVGKLSDSLEKGIGNLVDADLAKESARLQS 248
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
LQ +QQL QALSI N++ + IL FR
Sbjct: 249 LQVKQQLGTQALSIANSAPSNILGYFR 275
>gi|307318922|ref|ZP_07598353.1| flagellin domain protein [Sinorhizobium meliloti AK83]
gi|306895336|gb|EFN26091.1| flagellin domain protein [Sinorhizobium meliloti AK83]
Length = 321
Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 82/205 (40%), Positives = 109/205 (53%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI+TN +AM+A Q LR IN+NLE Q R+SSG RV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSIMTNPAAMAALQTLRAINHNLETTQGRISSGFRVETAADNAAYWSIATTMRSDNAAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S V DA+GLG++KVD + M IDVM+ IK K+ A E G D I E+ +L+SQL
Sbjct: 61 STVHDALGLGAAKVDTFYSAMDTVIDVMTEIKAKLVAASEPGVDKDKINKEVAELKSQLN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A+ +SF+GENWL ++ + + + D + V D + D +
Sbjct: 121 SAAQSASFSGENWLYNGAAAALGTKSIVASFNRSADGSVTVSTLNYDTAKSVLIDVADPA 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ D
Sbjct: 181 RGMLTKAVNADALQSTPTGTARNYY 205
Score = 92.1 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 61/319 (19%), Positives = 115/319 (36%), Gaps = 2/319 (0%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ + +++ + ++ D ++T ++ L
Sbjct: 4 IMTNPAAMAALQTLRAINHNLETTQGRISSGFRVETAADNAAYWSIATTMRSDNAALSTV 63
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + + + ++ ++ K KL S + + A+ + +
Sbjct: 64 HDALGLGAAKVDTFYSAMDTVIDVMTEIKAKLVAASEPGVDKDKINKEVAELKSQLNSAA 123
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+A + + + + +T + A+
Sbjct: 124 QSASFSGENWLYNGAAAALGTKSIVASFNRSADGSVTVSTLNYDTAKSVLIDVADPARGM 183
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
T + + + D + +M+S +D I
Sbjct: 184 LTKAV--NADALQSTPTGTARNYYLIDAGAAPAGATEIEIDNTTTAAQLGDMISVVDELI 241
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
T +A +G+I+SRI +QE F+ + D ++KGVGRLVDADM ESTRL ALQTQQQL
Sbjct: 242 SQLTDSAATLGAITSRIEMQESFVANLMDVIDKGVGRLVDADMNEESTRLKALQTQQQLG 301
Query: 433 VQALSIVNNSTARILSLFR 451
+Q+LSI N ++ IL LF+
Sbjct: 302 IQSLSIANTTSENILRLFQ 320
>gi|330445356|ref|ZP_08309008.1| flagellar hook-associated protein 3 [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328489547|dbj|GAA03505.1| flagellar hook-associated protein 3 [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 411
Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 52/450 (11%), Positives = 115/450 (25%), Gaps = 49/450 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + L + +++S+G RV A D+ Q + +
Sbjct: 5 ISTASQYQSLTSNLMRKQGEVSESNNKLSTGKRVETAGDDPVSSVTIQNYRQQLTQIDQY 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI---TAGVERGTDSKSIQSEITQLQSQLR 120
+I + ++++ + ++ ++ D + K K+ G D + + E+ L+ L
Sbjct: 65 KSSITMANNRLGVMESSIAGVEDNLDATKQKVLRMINGAMASNDRTAFKDELISLRDGLL 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++A +G D I DS
Sbjct: 125 ELANSRDESGSYVFAGD---------------------QMDTKPFIKDANGKMVYQGDSQ 163
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + ++ + + + A
Sbjct: 164 SRYAQIDKSVEVKTSLPGDQLFTSVPNPYGDFRPDFSDLSDGSKLHVLSATTSDFTKAKP 223
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
LP + VA + G +
Sbjct: 224 IDIQFTEGTETLPDGTEKKVMQYSLNIDGKEVVADENYDPKQGIQYTAADGSEL------ 277
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+D + + I+ S+ T + +
Sbjct: 278 --------------SITLDDVEVGDQLTLNPAQSINIFDSLQDAIDNAEKPTSSAAAEAT 323
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ++ ID+ + ++G+I ++ Q+D + L D D +
Sbjct: 324 LQGVIDDIDSSFVHVSQRRSEVGTIMQQVERQQDQHLDFELTLNTAQSGLEDLDYSKAIM 383
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q + A S LSLF
Sbjct: 384 EMNQQMMALQASQSAFSKTKQ-----LSLF 408
>gi|71278945|ref|YP_268232.1| flagellin [Colwellia psychrerythraea 34H]
gi|71144685|gb|AAZ25158.1| flagellin [Colwellia psychrerythraea 34H]
Length = 516
Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 37/328 (11%), Positives = 84/328 (25%)
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A ++ L + +V + L T ++ +
Sbjct: 188 AIDATAGTAGLTGESLDVAVNGTTTTVALTDDMSAADLATSLNSVSGLSGVTASTEALIN 247
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
T D + A +
Sbjct: 248 ITAMGDTADTVTLSIDGNDIGAYTFDGGSTAQDETDLAAMINTDANMVTAGITATVNANN 307
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
+ + + TS T+ S ++ A+ + + S +
Sbjct: 308 EISIVKADGSELSIEVTDITSSTANVTSITIDAADSAGTNAATGTVTATANNTSASVAAQ 367
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
+ TV T T + + + + + + + +
Sbjct: 368 FITGTVDFSAATVEGDTASLTIGTTTGNTTVSAAASTLAIGASTFSSIEEVSLLTEDGSQ 427
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+S ID + + +G++ +R + +++ V R+ D D A+E+ ++
Sbjct: 428 SAISVIDGALAAIDSQRADLGAVQNRFGHTISNLANIQENVSASRSRIQDTDFATETAQM 487
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLF 450
+ Q QQ L+ N LSL
Sbjct: 488 TKNQILQQAGTSILAQANQLPQAALSLI 515
>gi|317152823|ref|YP_004120871.1| flagellin domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316943074|gb|ADU62125.1| flagellin domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 285
Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 3/134 (2%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ L L +R+SSGLR++ ++D+AA ++ ++M+SD ++ G S +
Sbjct: 16 RNLNTSYSALSTSTERLSSGLRINSSSDDAAGLAVRELMRSDVATINQGVRNANDGISMI 75
Query: 75 DIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
A +S + + +K + + I E + S++ IA + FNG
Sbjct: 76 QTADGALSVVDEKLIRMKELAEQASTGTYTDSQRQIIDDEYQAMASEITRIASATDFNGI 135
Query: 132 NWLRTDLGSSTASI 145
+ L +LG + +I
Sbjct: 136 HLLNGNLGGTGMTI 149
Score = 99.8 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 54/140 (38%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
G T ++ D + + V + + + + + + + + +D
Sbjct: 145 TGMTIHFGTGNDEAEDKYAVTIDDCSAEALGVGIGVGENVAGATVSTQASAQAALEALDN 204
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
I +G++ +R+ +++ + ++ R+ D D+A+E T + Q Q
Sbjct: 205 AITSKDKVRANLGAMENRLSATISNLEIQAENLQAAESRISDVDVATEMTEYTKQQIITQ 264
Query: 431 LAVQALSIVNNSTARILSLF 450
+AV LS N+ LSL
Sbjct: 265 MAVSMLSQANSLPQMALSLI 284
>gi|254505031|ref|ZP_05117182.1| Flagellin hook IN motif domain protein [Labrenzia alexandrii
DFL-11]
gi|222441102|gb|EEE47781.1| Flagellin hook IN motif domain protein [Labrenzia alexandrii
DFL-11]
Length = 506
Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 78/506 (15%), Positives = 159/506 (31%), Gaps = 56/506 (11%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I + + L++ ++ VQ+++++GL+V+ A DN + A + S L
Sbjct: 1 MSGITLSAAVRQNLLTLQNTSFLTADVQNKLATGLKVNSALDNPGNFFTASALNSRASDL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQ 118
S++ D +G + + A G++ ++ + K K + + K ++ +L Q
Sbjct: 61 SSLLDDMGQSVNTIKAADDGITAITKLVESAKAKANQALQTQSQYERKQFAAQYNELLEQ 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR----------------------- 155
+ D AR SS+ G+N L +
Sbjct: 121 IEDTARDSSYKGKNLLAGAGNDLRTIFNEDSTSRLDISAIDYTDTTLSTGLNLSDLVEGQ 180
Query: 156 ------------------------DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
+ + + +T S+ T +
Sbjct: 181 GGATAFNLLGGATTITLTGSDGALNSSSTLSESTAISTTTTLEFTNVQSSTPTLIGTTVS 240
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
++ + + + + AT G A
Sbjct: 241 SGASVQDLVDAINGTEGVRAEFDESNGELTIYSNQDFLISDTDTTATTALTIGSAASVNA 300
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ T SG+ +G+ +I T + + +
Sbjct: 301 SALTTGSLLTNSGSFAVGDTIALTDGNNYELGSLEIEDSTTVSDLVNFINDFNGVDAQYN 360
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
T T T L + ++ ++ T + + + I+
Sbjct: 361 NTTGRLSITSETDLTVSSERSGSANTDFASSNFAATTNGAQSLSALTDSGFATDTEINRV 420
Query: 372 IKCAT-------AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
I A + G+ S + ++DF + + + +++G G+L AD E L A
Sbjct: 421 ITRLNNSLGNLRTQASEFGTNLSIVENRQDFTRAIVNTLQEGAGKLTLADTNEEGANLLA 480
Query: 425 LQTQQQLAVQALSIVNNSTARILSLF 450
LQT+QQLA +LS + + +LSLF
Sbjct: 481 LQTRQQLASTSLSFASQADQTVLSLF 506
>gi|33311219|gb|AAQ03610.1| flagellin [Borrelia garinii]
Length = 129
Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 3/127 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 3 NGANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 62
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 63 NLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 122
Query: 137 DLGSSTA 143
S
Sbjct: 123 KSASQNV 129
>gi|260439469|ref|ZP_05793285.1| flagellin [Butyrivibrio crossotus DSM 2876]
gi|292808095|gb|EFF67300.1| flagellin [Butyrivibrio crossotus DSM 2876]
Length = 320
Score = 99.8 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 38/364 (10%), Positives = 87/364 (23%), Gaps = 47/364 (12%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLRD 121
G S V A+ +++ D++ + G D IQ E+ QL ++
Sbjct: 1 SNAQDGISAVQTAEGALNEVQDMLQRMNELAVKAANGTNSEDDRNYIQDEVNQLIKEIDG 60
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
++ + FN L+ D ++ + E S
Sbjct: 61 VSTTTKFNETYLLKGDDTTAATVADAAAAEGTAGAAQTYDIDFAGKITAPAEGKSDVSFK 120
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
G++ Y + + ++ S + + L AA
Sbjct: 121 VGSKTYSITVEAGDDANKIGGKIKDALNNNKYSDKVGGDYTATNAGAKITLTAAKNGVIA 180
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + A + + + S
Sbjct: 181 ADDKLSATANKDVTLKASGILTLSLHVGADST---------------------------- 212
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
D + + + T +
Sbjct: 213 ----------------SDNQISVDIKQMSADVLGLKTGKSSTTAAENDTLLVNGSNDDNA 256
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ + I + ++ + +G+ +R+ + + + + D DMA+E +
Sbjct: 257 RKAIDTIASALQEVSKQRSALGAAQNRLEHTIANLDNVVENTTSAESSIRDTDMATEMVK 316
Query: 422 LSAL 425
S
Sbjct: 317 YSNN 320
>gi|110349493|gb|ABG73227.1| flagellin [Borrelia persica]
Length = 243
Score = 99.8 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A++AS+ NL Q+++SSG R++ A+D+AA +A + + LS S
Sbjct: 1 AINASRNNAINVANLSKTQEKLSSGYRINRASDDAAGMGVAGKINAQIRGLSQASRNTSK 60
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGS 126
+ + + +++ V+ +K D SIQ EI QL ++ IA +
Sbjct: 61 AINFIQTTEGNLNEVEQVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQA 120
Query: 127 SFNGENWLRTDLGSSTASIAK 147
+N L + A+
Sbjct: 121 QYNQMRMLSNKSAADNVKTAE 141
>gi|306516609|gb|ADM96193.1| FlaA [Campylobacter coli]
Length = 206
Score = 99.8 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 79/205 (38%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + L+ R+SSGLR++ AAD+A+ +IA +++ L
Sbjct: 2 INTNGAALNAKANSDLNSRALDQSLARLSSGLRINSAADDASGMAIADSLRTQASTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ +S + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 INNGNDAASILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I + + + + DS
Sbjct: 122 NIANTTSFNGKQLLSGSFINQEFQIGAQSNQTIKASIGATQSSKIGVTRFETGSQISDSG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
T +
Sbjct: 182 TAQITIKNYNGIEDFKFQSVVISTS 206
>gi|87242430|gb|ABD33754.1| flagellin [Bacillus thuringiensis serovar xiaguangiensis]
Length = 338
Score = 99.8 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 35/238 (14%), Positives = 80/238 (33%), Gaps = 3/238 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + +
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARENGLGVAANNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + K++ E + L+ Q+ I++ + FN + L D
Sbjct: 61 NSVSNILLRMRDIANQSANGTNTSDNQKALDKEFSALKEQIDYISKNTEFNDKKLLNGDN 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
S + + + N T+ + T + + +
Sbjct: 121 KSIAIQTLDNADTTKQININLADSSTSALKIDTLSIEGTGTKTIAITTADIAKDTNIAAL 180
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
++ ++T T K + I A
Sbjct: 181 TAAKGTLAGLTGSPTEAALTTAVEGFKTAFEKVDKNLMSDTAIKGIETAIKAYDEAGT 238
Score = 68.2 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 15/121 (12%), Positives = 43/121 (35%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ + T + + + + + V T + E + ID +
Sbjct: 218 MSDTAIKGIETAIKAYDEAGTKTLALAQAVGAAYTAPTAGNITKAAPNASEAIKSIDAAL 277
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ + +G+ +R+ + +K ++ ++ DADMA E + ++ + +
Sbjct: 278 ETIASNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAG 337
Query: 433 V 433
+
Sbjct: 338 I 338
>gi|87242410|gb|ABD33744.1| flagellin [Bacillus thuringiensis serovar medellin]
Length = 347
Score = 99.8 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 64/187 (34%), Gaps = 3/187 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARENGLGVAANNTQDGMSLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++ E + L+ Q+ I+ + FN + L
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTDKNQAALNKEFSALKQQIDYISTNTEFNDKKLLDGSN 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ + + + T + + T +
Sbjct: 121 ETIAIQTLDNADTNKQMNIQLANVSTEALKLNKLDIEGTTAETLKMTDADISALGTAHTA 180
Query: 199 EPQVLKD 205
Sbjct: 181 TKSAADA 187
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 41/105 (39%)
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ L G ++ T ++ E ++ ID ++ + +G+ +R
Sbjct: 243 QTLANAKAIGDALTTDTSAFKKDSTYTKETSDASTAIASIDAALESIASNRATLGATLNR 302
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ + +K ++ ++ DADMA E + ++ + + +
Sbjct: 303 LDFNVNNLKSQPSSMASAASQIEDADMAKEMSEMTKFKILNEAGI 347
>gi|328545581|ref|YP_004305690.1| flagellin-like protein [polymorphum gilvum SL003B-26A1]
gi|326415322|gb|ADZ72385.1| Flagellin-like protein [Polymorphum gilvum SL003B-26A1]
Length = 274
Score = 99.8 bits (246), Expect = 9e-19, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 74/184 (40%), Gaps = 3/184 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +A +A + L + + +++SG R++ A+D+AA +I+ ++SD L
Sbjct: 1 MPVISTNTAANTAVRYLNSNSTDQSDSLAKLASGSRITKASDDAAGLAISTKIRSDVAVL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
S S + A G ++ D++ +K ++ I +E QL
Sbjct: 61 EQASTNASNAISILQTADGGAARISDILERMKVLAAQSSSGTVTDSERVYIDAEFQQLIE 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA+ + +NG++ L + ++ + ++ +
Sbjct: 121 EIDGIAQSTRYNGDSLLESTSAATAGLSVVVGTDVSDTISLTTYALDATSIGVNALDLAS 180
Query: 178 DSST 181
++
Sbjct: 181 ATNA 184
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 44/96 (45%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ ++ +DT I +AA K+G+ SR + + I + ++ + D D+
Sbjct: 179 ASATNADAAMTALDTAIDSVSAARAKMGATMSRFEFRSEAIATSMENLDAAQSAIADVDI 238
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+E RLSA + Q AV A + N +L L +
Sbjct: 239 AAEQARLSATSVKVQAAVAAAAQANEMPQNLLKLLQ 274
>gi|229043513|ref|ZP_04191223.1| Flagellin [Bacillus cereus AH676]
gi|228725891|gb|EEL77138.1| Flagellin [Bacillus cereus AH676]
Length = 157
Score = 99.8 bits (246), Expect = 9e-19, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 48/113 (42%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A+DN A +I M + +
Sbjct: 6 ISTNVLSMNARQSLYENETRMNVAMEHLATGKKLNHASDNPANITIVTRMHARASGMRVT 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ 116
S + A+A + I+++ +++ + + +L+
Sbjct: 66 IRNNEDAISMLRTAEAALQTVINILQRMRDLAVQSANGTNLNANRDLLNKELR 118
>gi|222147580|ref|YP_002548537.1| flagella associated protein [Agrobacterium vitis S4]
gi|221734568|gb|ACM35531.1| flagella associated protein [Agrobacterium vitis S4]
Length = 320
Score = 99.8 bits (246), Expect = 9e-19, Method: Composition-based stats.
Identities = 75/144 (52%), Positives = 100/144 (69%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI+TN++A+SA LR I+ ++E Q R+SSG +V A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSIMTNNAAISALSTLRSISSDMETTQSRISSGYKVESASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV DAIGLG++K D A GM AI V+S IK K+ A E G D I E+T+L++QL
Sbjct: 61 GAVEDAIGLGAAKTDTAYTGMESAISVVSDIKAKLVAAREPGVDKDKINKELTELKNQLG 120
Query: 121 DIARGSSFNGENWLRTDLGSSTAS 144
+A+ +SFNGENWL + S+ +
Sbjct: 121 SVAKSASFNGENWLYDNSDSTGTT 144
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 69/319 (21%), Positives = 115/319 (36%), Gaps = 2/319 (0%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ + S S +S+ + ++ D ++T ++ L
Sbjct: 4 IMTNNAAISALSTLRSISSDMETTQSRISSGYKVESASDNAAYWSIATTMRSDNKALGAV 63
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
I + + A +S K KL + + + +
Sbjct: 64 EDAIGLGAAKTDTAYTGMESAISVVSDIKAKLVAAREPGVDKDKINKELTELKNQLGSVA 123
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+A + + + GN T T+ +
Sbjct: 124 KSASFNGENWLYDNSDSTGTTQEMVGSFVRGNDGNVSIKTISFDTTNSILINDEAGDGGL 183
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
T V T + + + + ++ MV+ +D +
Sbjct: 184 LTKGTVATYAYGTTT--TTASYYLISSVAGNTSSASEVTLTSTTTDDEIDGMVASVDKML 241
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
T AA IG+ +SR+ LQ+ FIK + D ++ GVGRLVDADM EST+L ALQTQQQL
Sbjct: 242 TSMTDAAATIGATTSRLKLQDSFIKDLSDTIDTGVGRLVDADMNEESTKLKALQTQQQLG 301
Query: 433 VQALSIVNNSTARILSLFR 451
+Q+LSI N+S+ +LSLFR
Sbjct: 302 IQSLSIANSSSENVLSLFR 320
>gi|91200727|emb|CAJ73779.1| similar to Flagellin [Candidatus Kuenenia stuttgartiensis]
Length = 300
Score = 99.8 bits (246), Expect = 9e-19, Method: Composition-based stats.
Identities = 50/300 (16%), Positives = 114/300 (38%), Gaps = 3/300 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I TN +A++A + L DIN L V Q R+++G R+++AAD+AA ++IA+ + + L
Sbjct: 1 MSRINTNINALNALRSLNDINSKLSVSQLRLATGKRINNAADDAAGFTIAKKFNARSQGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQS 117
IG + + +A+ ++ +D+++ +K K T + + +IQSE+ L +
Sbjct: 61 GQALANIGSAKNLMAVAEGHLNNILDILTQMKTKATQAADDSLGSAERNAIQSELKALAT 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ +++N ++ T ++ + A SV F + + L + +
Sbjct: 121 QIDLEVTQATWNSQSIFGTGNSATGSGAASSVQFKFQIGAGASSTNDVLKFDLLAKDNVS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
++ + L + ++ T + + GA +
Sbjct: 181 FDDSNTNYKADGLRVSVATAGRAVTSSASAQALMSNIDTAIADVSEGLSYIGAVVNRLTY 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
T + + S + + ++ ++ +
Sbjct: 241 QETSLTVARTNTEAARSRIEDADMAYEQLESTKFQILQQTASAMLAQANAGPQSIMQLFQ 300
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 52/121 (42%)
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
+ ++ Y L ++ A + + ++S IDT I + IG++ +R+
Sbjct: 180 SFDDSNTNYKADGLRVSVATAGRAVTSSASAQALMSNIDTAIADVSEGLSYIGAVVNRLT 239
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
QE + + R E R+ DADMA E + Q QQ A L+ N I+ LF
Sbjct: 240 YQETSLTVARTNTEAARSRIEDADMAYEQLESTKFQILQQTASAMLAQANAGPQSIMQLF 299
Query: 451 R 451
+
Sbjct: 300 Q 300
>gi|253998460|ref|YP_003050523.1| flagellin domain-containing protein [Methylovorus sp. SIP3-4]
gi|253985139|gb|ACT49996.1| flagellin domain protein [Methylovorus sp. SIP3-4]
Length = 266
Score = 99.8 bits (246), Expect = 9e-19, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 64/196 (32%), Gaps = 3/196 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN ++++A + L +L R+SSGLRV+ A D+AA SIA M S +
Sbjct: 3 AVINTNIASLNAQRNLSSSQSSLNTSLQRLSSGLRVNSAKDDAAGMSIATRMDSQVRGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S A+ + K D + ++ D ++ +E QL S+
Sbjct: 63 VAIRNANDAISFAQTAEGALGKVTDALQRMRELAVQSANATNGTGDRSNLDAEFQQLASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ + + FNG + + + + + +
Sbjct: 123 ITRLGTDTKFNGIAVFGSSSMTFQVGADSGQTITVSATAASSITGNILTDTAANTALAAI 182
Query: 179 SSTDGTERYGLLDRNH 194
+ T
Sbjct: 183 DTALDTANTNRATLGA 198
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 53/139 (38%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T + + S DSG ++ + T A ++ IDT +
Sbjct: 128 TDTKFNGIAVFGSSSMTFQVGADSGQTITVSATAASSITGNILTDTAANTALAAIDTALD 187
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R +++ + R++DAD ASE+ L+ Q QQ
Sbjct: 188 TANTNRATLGAVQNRFESVISALQVSVENQSAAKSRIMDADFASETANLTRTQILQQAGT 247
Query: 434 QALSIVNNSTARILSLFRG 452
L+ N +L+L RG
Sbjct: 248 AMLAQANTVPQNVLTLLRG 266
>gi|157101668|gb|ABV23539.1| flagellin B [Bacillus thuringiensis serovar alesti]
Length = 285
Score = 99.8 bits (246), Expect = 9e-19, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 67/179 (37%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 68 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEIN 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA ++FNG +L + D I T V D
Sbjct: 128 HIADKTNFNGNAFLNKGTNPDEGKDITIQLSDASSDTMIIAAIETKKLTTATLAVSTDG 186
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 34/84 (40%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+DT I+ A GS +R+ + + + ++ DADMA E + ++ +
Sbjct: 202 LDTAIQNIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKI 261
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
+ + S N + + L +
Sbjct: 262 LNEAGISMPSQANQTPQMVSKLLQ 285
>gi|218671649|ref|ZP_03521318.1| putative flagellin protein [Rhizobium etli GR56]
Length = 250
Score = 99.8 bits (246), Expect = 9e-19, Method: Composition-based stats.
Identities = 52/96 (54%), Positives = 73/96 (76%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ +S I++ + T+A ++GSIS+RI LQEDF+ + D+++ GVGRLVDADM
Sbjct: 155 TTGQIQSALSTIESALSAMTSAGAQLGSISTRIELQEDFVSALSDSIDSGVGRLVDADME 214
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
ES++LSALQTQQQLA+Q+LSI N+S+ ILSLFRG
Sbjct: 215 EESSKLSALQTQQQLAIQSLSIANSSSQNILSLFRG 250
Score = 50.5 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 48/94 (51%), Positives = 64/94 (68%)
Query: 53 MKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEI 112
M+SDN ALSAVSDA+GLG++KVD A M AIDV+ IK K+ A E G D +Q EI
Sbjct: 1 MRSDNKALSAVSDALGLGAAKVDTAYTAMESAIDVVDEIKAKLVAATEDGVDKSKVQEEI 60
Query: 113 TQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
+QLQ QL IA+ +SF+GENW+ + G+ + +
Sbjct: 61 SQLQEQLMSIAQSASFSGENWVAGESGTKSVVSS 94
>gi|220927561|ref|YP_002504470.1| flagellin domain protein [Clostridium cellulolyticum H10]
gi|219997889|gb|ACL74490.1| flagellin domain protein [Clostridium cellulolyticum H10]
Length = 276
Score = 99.4 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 37/96 (38%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
A ++ ++TQI +A G+ +R+ + + + + R+ D DM
Sbjct: 181 TASSAASTSINDVETQINKVSAMRSYYGANQNRLEYNINNLDTYSENLSASESRIRDVDM 240
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+E + Q A L+ N +L L R
Sbjct: 241 ANEMMEFTKQNILSQAAQSMLAQANQQPQGVLQLLR 276
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 36/223 (16%), Positives = 84/223 (37%), Gaps = 4/223 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +AM+ ++L + +++SSGLR++ A D+AA +I++ M+ L+
Sbjct: 3 INHNIAAMNTYRQLTNNTTASSKSLEKLSSGLRINRAGDDAAGLAISEKMRGQIRGLNQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI----QSEITQLQSQL 119
S G S + + ++ +++ +K D+ + EIT+L +Q+
Sbjct: 63 SRNSQDGISMIQTGEGALATVSNILVRVKELAVQAANGTYDAANDLKRITEEITELGAQV 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
DI + FNG + L + G++ + +T + + +
Sbjct: 123 TDIKDNTKFNGISLLNGNSGNNIVLQVGQETAQKLTILTATTDLTAVAKAVTDYAGAWTA 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
S+ + ++ + + + + +
Sbjct: 183 SSAASTSINDVETQINKVSAMRSYYGANQNRLEYNINNLDTYS 225
>gi|110349491|gb|ABG73226.1| flagellin [Borrelia persica]
Length = 242
Score = 99.4 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A++AS+ NL Q+++SSG R++ A+D+AA +A + + LS S
Sbjct: 1 AINASRNNAINVANLSKTQEKLSSGYRINRASDDAAGMGVAGKINAQIRGLSQASRNTSK 60
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGS 126
+ + + +++ V+ +K D SIQ EI QL ++ IA +
Sbjct: 61 AINFIQTTEGNLNEVEQVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQA 120
Query: 127 SFNGENWLRTDLGSSTASIAK 147
+N L + A+
Sbjct: 121 QYNQMRMLSNKSAADNVKTAE 141
>gi|163750560|ref|ZP_02157798.1| flagellin type B [Shewanella benthica KT99]
gi|161329715|gb|EDQ00704.1| flagellin type B [Shewanella benthica KT99]
Length = 344
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/289 (12%), Positives = 82/289 (28%)
Query: 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKK 221
+ + ++ + I +K + +A+ T +
Sbjct: 56 TNGSAGGTMTITQGTSTTNVVTVANDTATEVAAAINQAGTGVKATAETNVEANLTAAYDV 115
Query: 222 FKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR 281
+ +A + T +G+ + + + A
Sbjct: 116 SLVMNVDDGTSTSAVDLTGITNNKDLAAAINDVSGETGVTAKIDNGTLTITSSKGADINF 175
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
+ T N +T+A G T + + + I + +
Sbjct: 176 TEAGNGSGGMTLINKAADGTASATTTMANAGTTFVAAGAITLNSPAGFTVAAGISAEITT 235
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ NT + ++ ID I ++ +G+I +R+ + ++
Sbjct: 236 EATGVFAGVNTVDIGTASGAQNALAIIDGAIAGIDSSRADLGAIQNRMSFTISNLSNIQS 295
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
V GR+ D D A E+ ++ Q Q + L+ N LSL
Sbjct: 296 NVSDARGRIQDVDFAKETAEMTKQQILSQTSSAMLAQANQLPQVALSLL 344
>gi|255523708|ref|ZP_05390674.1| flagellin domain protein [Clostridium carboxidivorans P7]
gi|296186712|ref|ZP_06855114.1| putative flagellin [Clostridium carboxidivorans P7]
gi|255512577|gb|EET88851.1| flagellin domain protein [Clostridium carboxidivorans P7]
gi|296048749|gb|EFG88181.1| putative flagellin [Clostridium carboxidivorans P7]
Length = 286
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 57/133 (42%), Gaps = 3/133 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N ++++ + V R+SSG +V++A D+ + ++ ++ L
Sbjct: 3 LNHNSASLNVYTAYSKSLRSQSVAMGRISSGYKVNNAKDSPNGIADSERIRMQIRGLQMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ G S + A+ G+ + ++ ++ + D + IQ+EI Q+ +
Sbjct: 63 ARNSQDGMSMLQTAEGGLDEMTSMIQRVRELVVQSGSGSNNPGDKQVIQNEIDQMIDGMD 122
Query: 121 DIARGSSFNGENW 133
+IA + FNG
Sbjct: 123 NIANNTEFNGLKL 135
Score = 77.5 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 44/137 (32%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + + +KD+ + +L+ + + +++ ++ ID +
Sbjct: 144 MLVGANVGESIIVPQKDVTSKNLKTSDGKSLSQLKSGDLYNITNGNNIDDALNIIDQSLN 203
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ G++ +R D M D +E + D D+A E S Q
Sbjct: 204 SIVSIRSGYGALENRFQESFDDATEMSDRLESADSGIRDTDIAEEMVNYSRASILVQAGN 263
Query: 434 QALSIVNNSTARILSLF 450
+ N L +
Sbjct: 264 AMMVQTNKLPQDALKIL 280
>gi|157101692|gb|ABV23558.1| flagellin B [Bacillus thuringiensis serovar kurstaki]
Length = 285
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 67/179 (37%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 68 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEIN 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA ++FNG +L + D I T V D
Sbjct: 128 HIADKTNFNGNAFLNKGTNPDEGKDITIQLSDASSDTMIIAAIETKKLTTANLAVSTDG 186
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 34/84 (40%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+DT I+ A GS +R+ + + + + DADMA E + ++ +
Sbjct: 202 LDTAIQNIADARATFGSQLNRLDHNLNNVTSQATNMAASASHIEDADMAKEMSNMTKFKI 261
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
+ + LS N + + L +
Sbjct: 262 LNEAGISMLSQANQTPQMVSKLLQ 285
>gi|332187893|ref|ZP_08389626.1| flagellin protein FlaA [Sphingomonas sp. S17]
gi|332012054|gb|EGI54126.1| flagellin protein FlaA [Sphingomonas sp. S17]
Length = 288
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I +N SA+ A+ L V R+S+G R++ A D+AA +I+ M + +
Sbjct: 1 MTVIASNVSALRATSASTSAQNALSVSMQRLSTGSRINSAKDDAAGLAISNSMTAQIKGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S A+ +++ +++ ++ D +I +E T L +
Sbjct: 61 AQGIRNSNDGISMAQTAEGALNEVSNMLQRMRELKVQSSNGTYSNDDKANITNEQTSLAA 120
Query: 118 QLRDIARGSSFNGENWLRTDLG 139
Q++ + + + FNG+
Sbjct: 121 QIKSVVQNTKFNGKTLFDATAA 142
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 62/192 (32%)
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
+++GT + + + V+ T N T + K+
Sbjct: 96 VQSSNGTYSNDDKANITNEQTSLAAQIKSVVQNTKFNGKTLFDATAATAAVKIQTGATTA 155
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D+ L G + ++ + DA + ++ D I +
Sbjct: 156 DSVDINLRDLTATYAAGTGGAADTGSQLSAVVDFDAAATTPLKSDTLANYDNAIADVSKI 215
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+G++ +R+ + + + R+ D D + E+T L+ Q Q + LS
Sbjct: 216 RAGLGAVQNRLQSAVNSATSNMINLTEARSRIQDTDFSEETTALAKAQILSQASTAMLSQ 275
Query: 439 VNNSTARILSLF 450
N S +L L
Sbjct: 276 ANQSQQGVLKLL 287
>gi|312274364|gb|ADQ57422.1| flagellin [Borrelia persica]
Length = 244
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A++AS+ NL Q+++SSG R++ A+D+AA +A + + LS S
Sbjct: 1 AINASRNNAINVANLSKTQEKLSSGYRINRASDDAAGMGVAGKINAQIRGLSQASRNTSK 60
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGS 126
+ + + +++ V+ +K D SIQ EI QL ++ IA +
Sbjct: 61 AINFIQTTEGNLNEVEQVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQA 120
Query: 127 SFNGENWLRTDLGSSTASIAK 147
+N L + A+
Sbjct: 121 QYNQMRMLSNKSAADNVKTAE 141
>gi|4731618|gb|AAD28528.1|AF128957_1 flagellin [Escherichia coli]
Length = 555
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/231 (16%), Positives = 70/231 (30%), Gaps = 3/231 (1%)
Query: 26 VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAI 85
+R+SSGLR++ A D++A +IA S+ L+ + G S + +S+
Sbjct: 6 SSIERLSSGLRLNRAKDHSAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSEIN 65
Query: 86 DVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSST 142
+ + I+ +D SIQ EI ++ ++ + FNG N L D
Sbjct: 66 NNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKDGSMKI 125
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A I ++ + + +
Sbjct: 126 QVGANDGETITIDLKKIDSDTLGLNGFNVNGKGTITNKAATVSDLTSAGAKLNTTTGLYD 185
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
LK + + + T G + D +T +
Sbjct: 186 LKTENTLLTTDAAFDKLGNGDKVTVGGVNYTYNAKSGDFTTTKSTAGTGVN 236
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/286 (12%), Positives = 72/286 (25%)
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
D + + D + K + + L D +
Sbjct: 269 TKDGTVSFETDSAGNITIGGSQAYVDDAGNLTTNNAGSAAKADMKALLKAASEGSDGASL 328
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ A V + + TS S S
Sbjct: 329 TFNGTEYTIAKATPATTTPVAPLIPGGITYQATVSKDVVLSETKAAAATSSITFNSGVLS 388
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
T + + + TV+ N T + +
Sbjct: 389 KTIGFTAGESSDAAKSYVDDKGGITNVADYTVSYSVNKDNGSVTVAGYASATDTNKDYAP 448
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + V +N T+ + A ++ +D I +G+I +R+ +
Sbjct: 449 AIGTAVNVNSAGKITTETTSAGSATTNPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNL 508
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNS 442
+ + R+ DAD A+E + +S Q QQ L+ N
Sbjct: 509 NNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQV 554
>gi|187925802|ref|YP_001897444.1| flagellin [Burkholderia phytofirmans PsJN]
gi|187716996|gb|ACD18220.1| flagellin domain protein [Burkholderia phytofirmans PsJN]
Length = 381
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 52/351 (14%), Positives = 106/351 (30%), Gaps = 3/351 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +I+ M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQSALSQAITRLSSGKRINSAADDAAGLAISTRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A + +S + I+ +D ++Q E++ +
Sbjct: 61 NQGVSNANDGVSMIQTASSALSSLTSSLQRIRQLAVQASTGSLSSSDQAALQKEVSAQIA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG N L GS T + +V + D + + I L +
Sbjct: 121 EVNRIASQTTYNGTNILDGSAGSVTFQVGANVGQTISLDLSQSMSAAKIGGGLVQTGQTV 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ G VL D + +++ AA
Sbjct: 181 GTIAVSLNASGAYTSTGATITSVNVLSDGKGGYTFTDQNNTAITSGVSSAIFTAGTAAGT 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ A + + + + + + + + + A
Sbjct: 241 GTAVTNLTLSASAVTTAGAGSAAAVASVAQINAINNPPTVSGLDISTVTGANEAMVSIDN 300
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR 348
T + S +S + +
Sbjct: 301 ALQTVNTLQAALGAAQNRFTAIATSQQAESTDLSSAQSQITDANFAQETAN 351
Score = 84.0 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/373 (8%), Positives = 93/373 (24%)
Query: 79 AGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ ++ + A + + + + + +
Sbjct: 9 NSLVAQQNLNGSQSALSQAITRLSSGKRINSAADDAAGLAISTRMQTQINGLNQGVSNAN 68
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ S S + +++ + + ++ + + N
Sbjct: 69 DGVSMIQTASSALSSLTSSLQRIRQLAVQASTGSLSSSDQAALQKEVSAQIAEVNRIASQ 128
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
+I + + + A V A
Sbjct: 129 TTYNGTNILDGSAGSVTFQVGANVGQTISLDLSQSMSAAKIGGGLVQTGQTVGTIAVSLN 188
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
+ ++G+ SV + + ++S +
Sbjct: 189 ASGAYTSTGATITSVNVLSDGKGGYTFTDQNNTAITSGVSSAIFTAGTAAGTGTAVTNLT 248
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ S + + S + +N + + E + ID ++
Sbjct: 249 LSASAVTTAGAGSAAAVASVAQINAINNPPTVSGLDISTVTGANEAMVSIDNALQTVNTL 308
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+G+ +R + + ++ DA+ A E+ LS Q QQ + L+
Sbjct: 309 QAALGAAQNRFTAIATSQQAESTDLSSAQSQITDANFAQETANLSKAQVLQQAGISVLAQ 368
Query: 439 VNNSTARILSLFR 451
N++ ++L L +
Sbjct: 369 ANSNPQQVLKLLQ 381
>gi|54609832|gb|AAV35033.1| FlaA [Campylobacter jejuni]
Length = 543
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 86/263 (32%), Gaps = 3/263 (1%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
+ +L+ R+SSGLR++ AAD+A+ +IA ++S L + A
Sbjct: 6 NSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAISNGNDALGILQTADK 65
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
M + + ++ TIK K T + G +Q++I +L +L +IA +SFNG+ L
Sbjct: 66 AMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSG 125
Query: 137 DLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
+ + I S + + + +
Sbjct: 126 NFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRITSGGEVQFTLKNYNGIDDFK 185
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
+ + + + + I+ K + ++ +A +
Sbjct: 186 FQKVVISTSVGTGLGALADEINKNADKTGVRATFTVETRGMAAVRAGTTSNDFAINGVTI 245
Query: 257 AAPNTTSGTSGSKSPSVAASATY 279
+ T G S S
Sbjct: 246 GKVDYTDGDGNGALVSAINSVKD 268
Score = 75.5 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/353 (11%), Positives = 90/353 (25%)
Query: 84 AIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTA 143
+ T + + + D +++ T + + G++ N +G
Sbjct: 191 ISTSVGTGLGALADEINKNADKTGVRATFTVETRGMAAVRAGTTSNDFAINGVTIGKVDY 250
Query: 144 SIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
+ ++ K +LL S +
Sbjct: 251 TDGDGNGALVSAINSVKDTTGVEASIDANGQLLLTSREGRGIKIDGNIGGGAFINANMKE 310
Query: 204 KDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTS 263
+S+ G T +G + + + + + A A +
Sbjct: 311 NYGRLSLVKNDGKDILVSGTGLTAAGFGANSFISQASISLRESKGQLDANIADAMGFGSV 370
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
+ +A G+ + S + + N +
Sbjct: 371 NKGVAIGGFSTVTAYMSSEGSGFSAGSGYSVGSGKGYSATLTANAIVMSNASAASRVYNV 430
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+ S + +M T T ++ +T I IG
Sbjct: 431 SSGSGFSAGSNLSQFATMKTTAFGVKDETAGVTTLKGAMAVMDIAETAITNLDQIRADIG 490
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
S+ +++ + I + + V+ ++ D D A+ES S Q A+
Sbjct: 491 SVQNQVTSTINNITVTQVNVKAAESQIRDVDFAAESANYSKANILAQSGSYAM 543
>gi|157101682|gb|ABV23550.1| flagellin A [Bacillus thuringiensis serovar kurstaki]
Length = 281
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 3/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA + A M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLATATRMRAKEGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 68 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEID 127
Query: 121 DIARGSSFNGENWLRTDLG 139
IA ++FNG +L G
Sbjct: 128 HIADKTNFNGNAFLGGAGG 146
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 35/84 (41%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+DT I+ A GS +R+ + + + ++ DADMA E + ++ +
Sbjct: 198 LDTAIQEIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKI 257
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
+ + LS N + + L +
Sbjct: 258 LNEAGISMLSQANQTPQMVSKLLQ 281
>gi|110349487|gb|ABG73224.1| flagellin [Borrelia persica]
Length = 234
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A++AS+ NL Q+++SSG R++ A+D+AA +A + + LS S
Sbjct: 1 AINASRNNAINVANLSKTQEKLSSGYRINRASDDAAGMGVAGKINAQIRGLSQASRNTSK 60
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGS 126
+ + + +++ V+ +K D SIQ EI QL ++ IA +
Sbjct: 61 AINFIQTTEGNLNEVEQVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQA 120
Query: 127 SFNGENWLRTDLGSSTASIAK 147
+N L + A+
Sbjct: 121 QYNQMRMLSNKSAADNVKTAE 141
>gi|306516599|gb|ADM96188.1| FlaA [Campylobacter coli]
Length = 206
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 79/205 (38%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + L+ R+SSGLR++ AAD+A+ +IA +++ L
Sbjct: 2 INTNGAALNAKANSDLNSKALDQSLARLSSGLRINSAADDASGMAIADSLRTQASTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ +S + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 INNGNDAASILQTADKAMDEQLKILDTIKVKATQAAQDGQSAKTRAMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I + + ++ S
Sbjct: 122 NIANTTSFNGKQLLSGGFINQEFQIGAQSNQTIKASIGATQSSKIGVTRFETGANVMQSG 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 182 IASLTIKNYNGIDDFKFQDVVISTS 206
>gi|87242432|gb|ABD33755.1| flagellin [Bacillus thuringiensis serovar kim]
Length = 326
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R++ AAD+AA +IA MK+ G L+ + G S + A + +
Sbjct: 1 AKMSNSMDRLSSGKRINSAADDAAGLAIATRMKAREGGLNVAARNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++ E L+ Q+ IA + FN +N L++
Sbjct: 61 NSVSNILLRMRDLANQSATGTNTTKNQVALNKEFAALKEQITYIADNTQFNDKNLLKSTQ 120
Query: 139 GSSTASIAK 147
++
Sbjct: 121 EIKIQTLDS 129
Score = 74.4 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 35/103 (33%)
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
I + + K + V +D + +G+ +R+
Sbjct: 224 ATTAIAAFKKVTDAFDAIKDTAKIDTTKPSALTAVGQLDAALTKVADNRATLGATLNRLD 283
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +K +++ ++ DADMA E + ++ + + +
Sbjct: 284 FNVNNLKSQENSMAASASQIEDADMAKEMSEMTKFKILNEAGI 326
>gi|303325952|ref|ZP_07356395.1| flagellin FliC [Desulfovibrio sp. 3_1_syn3]
gi|302863868|gb|EFL86799.1| flagellin FliC [Desulfovibrio sp. 3_1_syn3]
Length = 297
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/291 (17%), Positives = 97/291 (33%), Gaps = 3/291 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A + + L +L+ R+S+GLRV+ AAD+AA +I ++M++D AL
Sbjct: 3 INHNQMATNVANTLTGHYSDLQTSTKRLSTGLRVNSAADDAAGLAIRELMRTDITALQQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A + + ++ +K T I+SE + S++
Sbjct: 63 VRNANDAISLIQTADGALGVIDEKLTRMKELAEQAATGTYDSTQRLMIESEYQAMASEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG + L +L SST S + ++ G + DYY S+
Sbjct: 123 RIANSTDFNGIHLLNGNLSSSTHSGSAMTSTGKMKIHFGTANDSAEDYYYIQIGTSTASA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + V + +S K + + +
Sbjct: 183 LGVGNQATASSTTADARTVSTQEQAQKALVGLTNAVVSKDKIRAHLGALQNRLENTISNL 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
+ + T + ++ + NS +
Sbjct: 243 TTQSENLQAAESRISDVDVATEMTSFVRNQILTQSAVAMLSQANSMPQMAM 293
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/296 (10%), Positives = 78/296 (26%)
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
N T + L L +ST ++ + + + +
Sbjct: 1 MYINHNQMATNVANTLTGHYSDLQTSTKRLSTGLRVNSAADDAAGLAIRELMRTDITALQ 60
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ ++ A + + S ++ +
Sbjct: 61 QGVRNANDAISLIQTADGALGVIDEKLTRMKELAEQAATGTYDSTQRLMIESEYQAMASE 120
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + I + +S T ST + D+ +
Sbjct: 121 ITRIANSTDFNGIHLLNGNLSSSTHSGSAMTSTGKMKIHFGTANDSAEDYYYIQIGTSTA 180
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
G + A+ + + ++ + + + +G++ +R+
Sbjct: 181 SALGVGNQATASSTTADARTVSTQEQAQKALVGLTNAVVSKDKIRAHLGALQNRLENTIS 240
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + ++ R+ D D+A+E T Q Q AV LS N+ + L
Sbjct: 241 NLTTQSENLQAAESRISDVDVATEMTSFVRNQILTQSAVAMLSQANSMPQMAMQLI 296
>gi|109947969|ref|YP_665197.1| flagellin B [Helicobacter acinonychis str. Sheeba]
gi|109715190|emb|CAK00198.1| flagellin B [Helicobacter acinonychis str. Sheeba]
Length = 514
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/510 (10%), Positives = 135/510 (26%), Gaps = 62/510 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKS-------- 55
I TN +A+++ N +L +++SSGLR++ AAD+++ +IA ++S
Sbjct: 5 INTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 56 --------------------DNGALSA----VSDAIGLGS---------SKVDIAKAGMS 82
L A G S + +
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRKALQSDIQRLLEELD 124
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA---------RGSSFNGENW 133
+ S ++ +G + + T +++ + + SSF+GE
Sbjct: 125 NIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIGSTSSDKIGHVRIETSSFDGEGM 184
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
L + + + + +D + L + + G+
Sbjct: 185 LASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASY 244
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
+ + ++ V +G + + + + + +
Sbjct: 245 NVMATGGTPVQSGTVRELTINGVVIGTVNDVRKNDADGRLTNAINSVKDRTGVEASLDIQ 304
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRM------------GNSDIWVRATTKNSITSDP 301
+ + S + G + ++
Sbjct: 305 GRINLRSIDGRAISVHAASASGQVFGGGNFAGISGNEHAVIGRLTLTRTDARDIIVSGVN 364
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ G Y V+ + ++ + +
Sbjct: 365 FSHVGLHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGA 424
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ D+ +GS+ + + I + + V+ ++ D D A ES
Sbjct: 425 MIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESAN 484
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q A++ N +L L +
Sbjct: 485 FSKYNILAQSGSFAMAQANAVQQNVLRLLQ 514
>gi|87242424|gb|ABD33751.1| flagellin [Bacillus thuringiensis serovar roskildiensis]
Length = 327
Score = 99.4 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 83/274 (30%), Gaps = 3/274 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANDTQDGMSLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + K++ E L+ Q+ IA + FN +N L
Sbjct: 61 NSVSNILLRMRDLANQSSNGTNTLDNQKALNKEFDALKEQINYIAENTQFNDKNLLDGSN 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ S + + T + D+
Sbjct: 121 PTIAIQTLDSANTTKQINIELGSVSTNSLNISGLKIDGTDTKELTAPDLAPTTGAAAALK 180
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
K D + + A +K N + ++ A
Sbjct: 181 GLDDTKTADQIQKAVDSFTTAFEKVKDFMPDAKVKLVNDAINAYTKDKSLDNAKAIEAAF 240
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT 292
T + S ++ I I
Sbjct: 241 TPNTPKAGDKANVSANSAIKAIDAALETIASNRA 274
Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 33/77 (42%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ + ID ++ + +G+ +R+ + +K ++ ++ DADMA
Sbjct: 251 ANVSANSAIKAIDAALETIASNRATLGATLNRLDFNVNNLKSQSASMASAASQIEDADMA 310
Query: 417 SESTRLSALQTQQQLAV 433
E + ++ + + +
Sbjct: 311 KEMSEMTKFKILNEAGI 327
>gi|91204577|emb|CAJ70805.1| similar to flagellar filament 31K core protein FlaB3 [Candidatus
Kuenenia stuttgartiensis]
Length = 299
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 90/206 (43%), Gaps = 3/206 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I TN A++A + L D+N L V Q R+++G R++ AAD+AA +SIA+ + + L
Sbjct: 1 MSRINTNIGALNALKSLNDVNTRLSVSQLRLATGKRINSAADDAAGFSIAKKFNARSQGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQS 117
IG + + +A+ ++ +D+++ +K K T + + +I++E+ QL
Sbjct: 61 GQALSNIGSAKNLMAVAEGHLNNILDILTQMKTKATQAADDSLGSAERNAIKAELNQLAV 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ +++N + +S ++ +G + + D +
Sbjct: 121 QIDLEVAQATWNSNSIFGGANATSGSASNVQFKFQIGAGSSGTNDVLSFDLLANTNVSFD 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVL 203
+TD L+ +
Sbjct: 181 SGATDKNYTASGLNVSIATTSVASNA 206
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 70/211 (33%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + + + + +V + + + + S
Sbjct: 89 TQMKTKATQAADDSLGSAERNAIKAELNQLAVQIDLEVAQATWNSNSIFGGANATSGSAS 148
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
G++ L + + + + T + +
Sbjct: 149 NVQFKFQIGAGSSGTNDVLSFDLLANTNVSFDSGATDKNYTASGLNVSIATTSVASNASA 208
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++S IDT I+ + A IGS+ +R+ QE + + R + R+ DADMA E
Sbjct: 209 RALMSNIDTAIEDVSEALSYIGSVVNRLTYQETSLTVARTNTDAARSRIEDADMAYEQLE 268
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ LQ QQ A L+ N S I+ LF+G
Sbjct: 269 ATKLQILQQTASAMLAQANTSPQIIMQLFQG 299
>gi|157101677|gb|ABV23546.1| flagellin B [Bacillus thuringiensis serovar alesti]
Length = 285
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 67/179 (37%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 68 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEIN 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA ++FNG +L + D I T V D
Sbjct: 128 HIADKTNFNGNAFLNKGTNPDEGKDITIQLSDASSDTMIIAAIETKKLTTATLAVSTDG 186
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 35/84 (41%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+DT I+ A GS +R+ + + + ++ DADMA E + ++ +
Sbjct: 202 LDTAIQNIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKI 261
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
+ + LS N + + L +
Sbjct: 262 LNEAGISMLSQANQTPQMVSKLLQ 285
>gi|87242444|gb|ABD33761.1| flagellin [Bacillus thuringiensis serovar pingluonsis]
Length = 356
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARENGLGVAANNTQDGMSLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++ E L+ Q+ I++ + FN + L
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTDGNQAALNKEFAALKDQIDYISKNTGFNDQKLLDGSK 120
Query: 139 GSSTASI 145
S
Sbjct: 121 DSIAIQT 127
>gi|33311209|gb|AAQ03605.1| flagellin [Borrelia burgdorferi]
Length = 126
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 3/123 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 3 TAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 62
Query: 80 GMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K SIQ EI QL ++ IA + +N + L
Sbjct: 63 NLNEVEKVLVRMKELAVQSGNGTYSDAARGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 122
Query: 137 DLG 139
Sbjct: 123 KSA 125
>gi|33311203|gb|AAQ03602.1| flagellin [Borrelia burgdorferi]
gi|33311207|gb|AAQ03604.1| flagellin [Borrelia burgdorferi]
gi|33311223|gb|AAQ03612.1| flagellin [Borrelia burgdorferi]
gi|33311229|gb|AAQ03615.1| flagellin [Borrelia burgdorferi N40]
gi|33311231|gb|AAQ03616.1| flagellin [Borrelia burgdorferi]
Length = 133
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 3 NAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 62
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 63 NLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 122
Query: 137 DLGSSTASIAK 147
S A+
Sbjct: 123 KSASQNVRTAE 133
>gi|48716096|dbj|BAD22836.1| flagellin [Campylobacter lari]
Length = 567
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/355 (11%), Positives = 87/355 (24%), Gaps = 15/355 (4%)
Query: 112 ITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG------------ 159
+ L ++ +A + ++T S + S + G
Sbjct: 213 MGALAEEINRVADVTGVRANFLVQTTGAGSIKADKTSQDFTINGVKIGEVEYKDGDENGA 272
Query: 160 ---KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
+ ++ + ++ + V VLKD + S
Sbjct: 273 LISAINSVKDTTGVEASKDANGRLVLNSRDGRGIEITGNMGVGSGVLKDDYKNFGRLSLV 332
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ K L + SG A ++ ++ G + K
Sbjct: 333 KNDGKDILISGSGLSFIGMGAGDMISQASVSLRESKGNIDTHVADAMGFNAYKGGGKMVI 392
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ S S + V S
Sbjct: 393 TFSSIEAFMSSNGSGMSAGSGFSIGSGKEMSKIYNSGNLALVTVFSNAFGFSAKNDGSSQ 452
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
T +I ++ +T I +G++ ++I + I
Sbjct: 453 FAAFAGTASIAAKDQQAGVTTLKGAMAVMDIAETAITNLDQIRADLGAVQNQITRTLNNI 512
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + ++ + D D A+ES + Q A+S N ++ L +
Sbjct: 513 SVTQVNIKSAESNIRDVDFAAESANFAKFNILAQSGSYAMSQANAVQQNVMRLLQ 567
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 78/211 (36%), Gaps = 3/211 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNVASLNAQNNANLNSRALDSSLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 64 INNGNDALGILQTADKAMDEQLKILDTIKVKATQAAQDGQSTKTRNMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + + I + + ++ S
Sbjct: 124 NIANTTAFNGKQLLSGGFTNQSFQIGAQSNQTIQAGIGATQSSKIGVTRFETGSMSHSSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ + + +
Sbjct: 184 VAQLTIKNYNGIDDFKFQPVVISSSVGTGMG 214
>gi|300086789|gb|ADJ67726.1| FlaB [Borrelia hispanica]
gi|300086791|gb|ADJ67727.1| FlaB [Borrelia hispanica]
gi|300086793|gb|ADJ67728.1| FlaB [Borrelia hispanica]
Length = 310
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++AS+ NL Q+++SSG R++ A+D+AA +A + + LS S
Sbjct: 1 INASRNNAINVANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKA 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSS 127
+ + + + + V+ +K D SIQ EI QL ++ IA +
Sbjct: 61 INFIQTTEGNLDEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQ 120
Query: 128 FNGENWLRTDLGSSTASIAK 147
+N + L + A+
Sbjct: 121 YNHMHMLSNRSAAENVRTAE 140
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 31/86 (36%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ T +G+ +R+ + + + ++ ++
Sbjct: 225 SPVNVTTAVDANMSLTKIEDAIRMVTDQRANLGAFQNRLESIKASTEYAIENLKASYAQI 284
Query: 411 VDADMASESTRLSALQTQQQLAVQAL 436
DA M E + Q A+ +
Sbjct: 285 KDASMTDEIVASTTNSILTQSAMAMI 310
>gi|182412211|ref|YP_001817277.1| flagellin domain-containing protein [Opitutus terrae PB90-1]
gi|177839425|gb|ACB73677.1| flagellin domain protein [Opitutus terrae PB90-1]
Length = 296
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 45/137 (32%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
V + I + A D L + ++ I + I+
Sbjct: 159 GLTVTIGQAVGQEMTIPNSNFRDSTGAMWSIIHQDAAGDYDEIALTDSDAIAKITSAIQD 218
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G+ SR+ L + + + + + R+ D D+A EST S Q
Sbjct: 219 VATERASLGASQSRLELASTTLSVEYENLSSAISRIRDVDVAQESTEYSKYNILVQSGTA 278
Query: 435 ALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 279 MLAQANQTPMSVLKLLQ 295
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 69/208 (33%), Gaps = 3/208 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I TN AM+A++ L L R+SSG ++ + +D+AA ++++ + + N +
Sbjct: 1 MSVINTNIQAMAAARSLSASQEALGRSLTRLSSGSKIVNPSDDAAGLAVSEKLDAQNRRV 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQS 117
A + + S + A MS V+S + + D E LQ+
Sbjct: 61 RAATTNVQNAISYIQTADGFMSGMTKVLSRMSELAILAKDVTKSSGDIALYSQEFVALQA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
QLR G++ + + S + P +
Sbjct: 121 QLRATIGGTTADIGGTADVSAPLGAFNGITLFGSSATGGLTVTIGQAVGQEMTIPNSNFR 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKD 205
DS+ ++
Sbjct: 181 DSTGAMWSIIHQDAAGDYDEIALTDSDA 208
>gi|228971753|ref|ZP_04132374.1| Flagellin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228978362|ref|ZP_04138739.1| Flagellin [Bacillus thuringiensis Bt407]
gi|228781379|gb|EEM29580.1| Flagellin [Bacillus thuringiensis Bt407]
gi|228787843|gb|EEM35801.1| Flagellin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|326939372|gb|AEA15268.1| flagellin [Bacillus thuringiensis serovar chinensis CT-43]
Length = 266
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 56/169 (33%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A+DN A I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNHASDNPANIVIVTRMYARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ T+ S+ E L +
Sbjct: 63 IRNNEDAISMLRTAEAALQTVTNILQHMRDFAIQSANGTNSNTNRDSLNKEFQSLTEPIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T I Q
Sbjct: 123 YIGETTEFNDLSVFDGQNRPITLDDIGHTINMTKHIPPSPTQHDIKIST 171
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 70/239 (29%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + + +A G+ A + T + +
Sbjct: 27 MEHLATGKKLNHASDNPANIVIVTRMYARASGMRVAIRNNEDAISMLRTAEAALQTVTNI 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + + T T + + + L
Sbjct: 87 LQHMRDFAIQSANGTNSNTNRDSLNKEFQSLTEPIGYIGETTEFNDLSVFDGQNRPITLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + I+ ++ + +GS+ +R+
Sbjct: 147 DIGHTINMTKHIPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGSMINRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ ++ DADMA E + + +A+ +S N + L +
Sbjct: 207 IENLNSQSMALIDTASQVEDADMAQEISDFLKFKLLTAVALSVVSQANQIPQIVSKLLQ 265
>gi|14861500|gb|AAK73700.1| flagellin A [Campylobacter jejuni]
Length = 557
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 89/273 (32%), Gaps = 3/273 (1%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A++A +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 1 ALNAKANSDLNAKSLDSSLARLSSGLRINSAADDASGMAIADSLRSQANTLGQAISNGND 60
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGS 126
+ A M + + ++ TIK K T + G +Q++I +L +L +IA +
Sbjct: 61 ALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINKLMEELDNIANTT 120
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
SFNG+ L + I S + + + S G
Sbjct: 121 SFNGKQLLSGGFTNQEFQIGSSSNQTVKATIGATQSSKIGVTRFETGSQSFTSGIVGLTI 180
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+ + + + I+ K + +K A +A +
Sbjct: 181 KNYNGIEDFKFDNVVISTSVGTGLGALAEEINKNADKTGVRATYDVKTTGAYAIKAGTTS 240
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ G + S +
Sbjct: 241 QDFAINGVIIGKVDYKDGDNNGSLISAINAVKD 273
Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 64/198 (32%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
I A + G + + + SA + G+ + S +
Sbjct: 360 GQISAANADAMGFNSYNGGGAKQILQASSISAFMSQAGSGFSAGSGFSAGSGKDYSTILS 419
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+V V +T T + S ++ T ++ H T ++
Sbjct: 420 GSVQIVSSTASMSSTYVISEGSGFSAGSGNSQFAALKTSTVSAHEATAGVTTLKGAMAVM 479
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+T I IGSI +++ + I + + V+ ++ D D ASES S
Sbjct: 480 DIAETAITNLDQIRADIGSIQNQVTSTINNITVTQVNVKSAESQIRDVDFASESANYSKA 539
Query: 426 QTQQQLAVQALSIVNNST 443
Q A++ N+S
Sbjct: 540 NILAQSGSYAMAQANSSQ 557
>gi|228945363|ref|ZP_04107718.1| Flagellin [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|228814335|gb|EEM60601.1| Flagellin [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
Length = 335
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 20/149 (13%), Positives = 47/149 (31%)
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
K + + L D A
Sbjct: 187 MKEFDKVKGAMSTEDAKAVTDKLGLFNTAAAGTDDTAIATAAKNLGAAFDKTKVNMADPN 246
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
V+ ID+ ++ + +G+ +R+ + +K + ++ ++ DADMA E + +
Sbjct: 247 ASVAAIDSALENIASNRATLGATLNRLDFNVNNLKSQQSSMASAASQIEDADMAKEMSEM 306
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + + LS N + + L +
Sbjct: 307 TKFKILNEAGISMLSQANQTPQMVSKLLQ 335
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 38/249 (15%), Positives = 77/249 (30%), Gaps = 3/249 (1%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + M+ ++
Sbjct: 1 MDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAMNSVSNI 60
Query: 88 MSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ +++ + ++ E L+ Q+ I+ + FN + L +
Sbjct: 61 LLRMRDLANQSANGTNTNENQAALNKEFDALKEQINYISTNTEFNDKKLLDGSNKTIAIQ 120
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ S D T + + T + + LK
Sbjct: 121 TLDNADTSKKIDIKLADVSTESLKIDKLKIGGVSKETTDAVSETFTKLSTTKTTDKDALK 180
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ + + T I AA + T
Sbjct: 181 AEVEAAMKEFDKVKGAMSTEDAKAVTDKLGLFNTAAAGTDDTAIATAAKNLGAAFDKTKV 240
Query: 265 TSGSKSPSV 273
+ SV
Sbjct: 241 NMADPNASV 249
>gi|48716106|dbj|BAD22841.1| flagellin [Campylobacter lari]
Length = 567
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/355 (11%), Positives = 88/355 (24%), Gaps = 15/355 (4%)
Query: 112 ITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG------------ 159
+ L ++ +A + ++T S + S + G
Sbjct: 213 MGALAEEINRVADVTGVRANFLVQTTGAGSIKADKTSQDFTINGVKIGEVEYKDGDENGA 272
Query: 160 ---KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
+ ++ + ++ ++V VLKD + S
Sbjct: 273 LISAINSVKDTTGVEASKDANGRLVLNSRDGRGIEITGNMEVGSGVLKDDYKNFGRLSLV 332
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ K L + SG A ++ ++ G + K
Sbjct: 333 KNDGKDILISGSGLSFIGMGAGDMISQASISLRESKGNIDTHIADAMGFNAYKGGGKMVV 392
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ S S + V S
Sbjct: 393 TFSSIEAFMSSDGSGMSAGSGFSIGSGKEMSKIYNSGNLALVTVFSNAFGFSAKNDGSSQ 452
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
T +I ++ +T I +G++ ++I + I
Sbjct: 453 FAAFAGTASIAAKDQQAGVTTLKGAMAVMDIAETAITNLDQIRADLGAVQNQITRTLNNI 512
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + ++ + D D A+ES + Q A+S N ++ L +
Sbjct: 513 SVTQVNIKSAESNIRDVDFAAESANFAKFNILAQSGSYAMSQANAVQQNVMRLLQ 567
Score = 86.7 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 58/383 (15%), Positives = 116/383 (30%), Gaps = 3/383 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNVASLNAQNNANLNSRALDSSLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 64 INNGNDALGILQTADKAMDEQLKILDTIKVKATQAAQDGQSTKTRNMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + + I + + ++ S
Sbjct: 124 NIANTTAFNGKQLLSGGFTNQSFQIGAQSNQTIQASIGATQSSKIGVTRFETGSMSHSSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + I+ + ++ A
Sbjct: 184 VAQLTIKNYNGIDDFKFQPVVISSSVGTGMGALAEEINRVADVTGVRANFLVQTTGAGSI 243
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+A + G S S + +
Sbjct: 244 KADKTSQDFTINGVKIGEVEYKDGDENGALISAINSVKDTTGVEASKDANGRLVLNSRDG 303
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G + +VG+ D ++ S + I A ++
Sbjct: 304 RGIEITGNMEVGSGVLKDDYKNFGRLSLVKNDGKDILISGSGLSFIGMGAGDMISQASIS 363
Query: 361 MEEMVSFIDTQIKCATAAAGKIG 383
+ E IDT I A G
Sbjct: 364 LRESKGNIDTHIADAMGFNAYKG 386
>gi|300086803|gb|ADJ67733.1| FlaB [Borrelia crocidurae]
Length = 311
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++AS+ NL Q+++SSG R++ A+D+AA +A + + LS S
Sbjct: 1 INASRNNAINVANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKA 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSS 127
+ + + + + V+ +K D SIQ E+ QL ++ IA +
Sbjct: 61 INFIQTTEGNLDEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEVEQLTDEINRIADQAQ 120
Query: 128 FNGENWLRTDLGSSTASIAK 147
+N + L + A+
Sbjct: 121 YNHMHMLSNRSSAEHVRTAE 140
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 31/86 (36%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ T +G+ +R+ + + + ++ ++
Sbjct: 226 SPVNVTTAVDANMSLTKIEDAIRMVTDQRANLGAFQNRLESVKASTEYAIENLKASYAQI 285
Query: 411 VDADMASESTRLSALQTQQQLAVQAL 436
DA M E + Q A+ +
Sbjct: 286 KDATMTDEIVASTTNSILTQSAMAMI 311
>gi|260767954|ref|ZP_05876888.1| flagellin protein flaA [Vibrio furnissii CIP 102972]
gi|260615984|gb|EEX41169.1| flagellin protein flaA [Vibrio furnissii CIP 102972]
gi|315179658|gb|ADT86572.1| lateral flagellin LafA [Vibrio furnissii NCTC 11218]
Length = 275
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/267 (12%), Positives = 88/267 (32%), Gaps = 3/267 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN++++ L N + +R+S+GLR++ AAD+AA +IA +++ +S
Sbjct: 3 LSMHTNYASLVTQNTLNSTNNLMTTAMERLSTGLRINSAADDAAGLTIANKLEAQTRGMS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
S + A + + ++ +K+ T G T+ ++ SE +L+++
Sbjct: 63 VAMRNSQDAISMLQTADGALEELTNIAYRMKDLATQGANGTNGTTELAALDSEYQELEAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
I +++ L + A + + + + +
Sbjct: 123 ATRILTQTTYGAGQQLLQGGKLAAAVDFQIGASAAETLTVDISTNLGNVDFTTTGALTTN 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++++ + V + +I+ + + + + A
Sbjct: 183 AASNAEITVIDGLFDTINTVRSTLGANINRLDHTINNLANVSENTAAAKGRITDADFAVE 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGT 265
+ + N
Sbjct: 243 SSNMTKNQMLMQAGTTVLSQTNQIPSM 269
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 42/121 (34%)
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
E + L T A A ++ ID +G+ +R+
Sbjct: 155 SAAETLTVDISTNLGNVDFTTTGALTTNAASNAEITVIDGLFDTINTVRSTLGANINRLD 214
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + + + GR+ DAD A ES+ ++ Q Q LS N + +SL
Sbjct: 215 HTINNLANVSENTAAAKGRITDADFAVESSNMTKNQMLMQAGTTVLSQTNQIPSMAISLL 274
Query: 451 R 451
R
Sbjct: 275 R 275
>gi|222147579|ref|YP_002548536.1| flagella associated protein [Agrobacterium vitis S4]
gi|221734567|gb|ACM35530.1| flagella associated protein [Agrobacterium vitis S4]
Length = 320
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 73/144 (50%), Positives = 99/144 (68%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI+TN +A+SA LR I+ ++E Q R+SSG +V A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSIMTNTAAISALSTLRSISSDMETTQSRISSGYKVESASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV DAIGLG++K D A GM AI V+S IK K+ A E G D + I E+ +L++QL
Sbjct: 61 GAVEDAIGLGAAKTDTAYTGMESAISVVSDIKAKLVAAREPGVDKEKINKELAELKNQLS 120
Query: 121 DIARGSSFNGENWLRTDLGSSTAS 144
+A+ +SFNG+NWL + S+ +
Sbjct: 121 SVAKSASFNGQNWLYDNSDSTGTT 144
Score = 89.8 bits (220), Expect = 9e-16, Method: Composition-based stats.
Identities = 69/319 (21%), Positives = 115/319 (36%), Gaps = 2/319 (0%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ S S +S+ + ++ D ++T ++ L
Sbjct: 4 IMTNTAAISALSTLRSISSDMETTQSRISSGYKVESASDNAAYWSIATTMRSDNKALGAV 63
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
I + + A +S K KL + + A+ +
Sbjct: 64 EDAIGLGAAKTDTAYTGMESAISVVSDIKAKLVAAREPGVDKEKINKELAELKNQLSSVA 123
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+A + + + GN T T+ +
Sbjct: 124 KSASFNGQNWLYDNSDSTGTTQEMVGSFVRGNDGNVSIKTISFDTTNSILINDEAGDGGL 183
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
T V T + + + + ++ MV+ +D +
Sbjct: 184 LTKGTVATYAYGTTT--TTASYYLISSVAGNTSSASEVTLTSTTTDDEIDGMVASVDKML 241
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
T AA IG+ +SR+ LQ+ FIK + D ++ GVGRLVDADM EST+L ALQTQQQL
Sbjct: 242 TSMTDAASTIGATTSRLKLQDSFIKDLSDTIDTGVGRLVDADMNEESTKLKALQTQQQLG 301
Query: 433 VQALSIVNNSTARILSLFR 451
+Q+LSI N+S+ ++SLFR
Sbjct: 302 IQSLSIANSSSENVMSLFR 320
>gi|114054935|gb|ABI50067.1| FlaA [Clostridium botulinum]
Length = 236
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 57/150 (38%), Gaps = 3/150 (2%)
Query: 35 LRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK 94
LR++ A D+AA +I++ M+ L S S + A+ +++ ++ ++
Sbjct: 1 LRINRAGDDAAGLAISEKMRGQIRGLDQASRNSQDSISLIQTAEGALTETHSILQRMREL 60
Query: 95 ITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
G D +I++EIT+L +++ I++ + FN + L I +
Sbjct: 61 AVQGANDTNVTADRAAIKTEITELNNEINRISQQTEFNTQKLLSGGFKDKNFQIGANKAQ 120
Query: 152 SFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ T + + +
Sbjct: 121 TIKLTIGDMSAKTLGVSGVSVSDASKATDS 150
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 41/112 (36%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + ++ + ++ ID + + K+G+ +R+ + +
Sbjct: 125 TIGDMSAKTLGVSGVSVSDASKATDSIATIDKALGTVSTERAKLGANQNRLEHTINNLNT 184
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ ++ R+ D DMA E S Q A L+ N + +L L
Sbjct: 185 SSENLQAAESRVRDVDMAKEMMAFSKNNILNQAAQAMLAQANQAPQGVLQLL 236
>gi|114054945|gb|ABI50072.1| FlaA [Clostridium botulinum]
Length = 205
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 59/163 (36%), Gaps = 3/163 (1%)
Query: 35 LRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK 94
LR++ A D+A +I++ M+ L S S + A+ +++ ++ ++
Sbjct: 1 LRINRAGDDAPGLAISEKMRGQIRGLDQASRNSQDSISLIQTAEGALTETHSILQRMREL 60
Query: 95 ITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
G D ++I++EIT+L +++ I+ + FN + L I +
Sbjct: 61 AVQGTNDTNVTADREAIKTEITELNNEINRISXQTEFNXQKLLSGGFKDKNFQIGANKAQ 120
Query: 152 SFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+ T + + + T L +
Sbjct: 121 TIKLSIGDMSAKTLGVSGVSVSDAXXATXSIXTIDTALGKVST 163
Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 29/81 (35%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + ++ + IDT + + K+G+ +R+ + +
Sbjct: 125 SIGDMSAKTLGVSGVSVSDAXXATXSIXTIDTALGKVSTERAKLGANQNRLXHTINNLNT 184
Query: 399 MRDAVEKGVGRLVDADMASES 419
+ ++ R+ DMA E
Sbjct: 185 SSENLQAAESRVRXVDMAKEM 205
>gi|1648844|dbj|BAA13584.1| flagellin protein [Borrelia afzelii]
Length = 292
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 2 NAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 61
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 62 NLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 121
Query: 137 DLGSSTASIAK 147
S A+
Sbjct: 122 KSASQNVKTAE 132
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/176 (7%), Positives = 43/176 (24%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 112 QYNQMHMLSNKSASQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 171
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
S + + +
Sbjct: 172 IYSANVANLFAGEGAQAAQAAPVQEGAQEEGAQQPTPATAPTQGGVNSPVNVTTTVDANT 231
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E
Sbjct: 232 SLAKIENAIRMISDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEV 287
>gi|163939568|ref|YP_001644452.1| flagellin domain-containing protein [Bacillus weihenstephanensis
KBAB4]
gi|163861765|gb|ABY42824.1| flagellin domain protein [Bacillus weihenstephanensis KBAB4]
Length = 280
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 66/209 (31%), Gaps = 3/209 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 3 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 63 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++FNG +L + S + I
Sbjct: 123 HIADKTNFNGNAFLGGTGAGGKDITIQLSDASSDTMKITAIDTKAITTATLATATATGPD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+
Sbjct: 183 KALNAASAPAQITALDTAIQGIADARATF 211
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 44/130 (33%)
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
S + + TL D + ++ +DT I+ A
Sbjct: 151 SDASSDTMKITAIDTKAITTATLATATATGPDKALNAASAPAQITALDTAIQGIADARAT 210
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
GS +R+ + + + ++ DADMA E + ++ + + + LS N
Sbjct: 211 FGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKILNEAGISMLSQANQ 270
Query: 442 STARILSLFR 451
+ + L +
Sbjct: 271 TPQMVSKLLQ 280
>gi|14861512|gb|AAK73706.1| flagellin A [Campylobacter jejuni]
Length = 557
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 89/273 (32%), Gaps = 3/273 (1%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A++A +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 1 ALNAKANSDLNAKSLDSSLARLSSGLRINSAADDASGMAIADSLRSQANTLGQAISNGND 60
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGS 126
+ A M + + ++ TIK K T + G +Q++I +L +L +IA +
Sbjct: 61 ALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINKLMEELDNIANTT 120
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
SFNG+ L + I S + + + S G
Sbjct: 121 SFNGKQLLSGGFTNQEFQIGSSSNQTVKATIGATQSSKIGVTRFETGSQSFTSGVVGLTI 180
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+ + + + I+ K + +K A +A +
Sbjct: 181 KNYNGIEDFKFDNVVISTSVGTGLGALAEEINKNADKTGVRATYDVKTTGAYAIKAGTTS 240
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ G + S +
Sbjct: 241 QDFAINGVIIGKVDYKDGDNNGSLISAINAVKD 273
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 64/198 (32%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
I A + G + + + SA + G+ + S +
Sbjct: 360 GQISAANADAMGFNSYNGGGAKQILQASSISAFMSQAGSGFSAGSGFSAGSGKGYSTILS 419
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+V V +T T + S ++ T ++ H T ++
Sbjct: 420 GSVQIVSSTASMSSTYVISEGSGFSAGSGNSQFAALKTSTVSAHEATAGVTTLKGAMAVM 479
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+T I IGSI +++ + I + + V+ ++ D D ASES S
Sbjct: 480 DIAETAITNLDQIRADIGSIQNQVTSTINNITVTQVNVKSAESQIRDVDFASESANYSKA 539
Query: 426 QTQQQLAVQALSIVNNST 443
Q A++ N+S
Sbjct: 540 NILAQSGSYAMAQANSSQ 557
>gi|47565425|ref|ZP_00236466.1| flagellin [Bacillus cereus G9241]
gi|47557415|gb|EAL15742.1| flagellin [Bacillus cereus G9241]
Length = 266
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 62/178 (34%), Gaps = 3/178 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +++A L + ++ V +R+S+G R++ A+D+ A +I M + +
Sbjct: 3 IGTNVLSINARLALYENEKHMNVAMERLSTGKRLNHASDDPANIAIVTRMHASANGMRIS 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + + E L Q
Sbjct: 63 IRNNEDTISMLRTAEAALQTVTNILQRMRDLAVQSATGTNSDENRNLLDKEFQALAEQSD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
I + + FN + + I S +D Q ++
Sbjct: 123 YINKVTEFNDIPQFDEEGRPIILNNTNHTIRSTKQDPPLSKQKDIKISTEQEAKAAIN 180
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 24/247 (9%), Positives = 64/247 (25%)
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ + K+ A+ A + A G+ + T
Sbjct: 19 NEKHMNVAMERLSTGKRLNHASDDPANIAIVTRMHASANGMRISIRNNEDTISMLRTAEA 78
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ + + + + T + +
Sbjct: 79 ALQTVTNILQRMRDLAVQSATGTNSDENRNLLDKEFQALAEQSDYINKVTEFNDIPQFDE 138
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
L + S + + + ++ I+ + +G+
Sbjct: 139 EGRPIILNNTNHTIRSTKQDPPLSKQKDIKISTEQEAKAAINKIENALHNVLLHRADLGA 198
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
+ +R+H + + A+ ++ DADMA E + + ++A+ +S N
Sbjct: 199 MINRLHFNIENLNSQSIALTDAASQIEDADMAQEMSSFIKYKLLTEVALSMVSQANQIPQ 258
Query: 445 RILSLFR 451
+ L +
Sbjct: 259 MVYKLLQ 265
>gi|300086799|gb|ADJ67731.1| FlaB [Borrelia duttonii]
Length = 311
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++AS+ NL Q+++SSG R++ A+D+AA +A + + LS S
Sbjct: 1 INASRNNAINVANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKA 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSS 127
+ + + + + V+ +K D SIQ E+ QL ++ IA +
Sbjct: 61 INFIQTTEGNLDEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEVEQLTDEINRIADQAQ 120
Query: 128 FNGENWLRTDLGSSTASIAK 147
+N + L + A+
Sbjct: 121 YNHMHMLSNRSSAEHVRTAE 140
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 31/86 (36%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ T +G+ +R+ + + + ++ ++
Sbjct: 226 SPVNVTTAVDANMSLTKIEDAIRMITDQRANLGAFQNRLESVKASTEYAIENLKASYAQI 285
Query: 411 VDADMASESTRLSALQTQQQLAVQAL 436
DA M E + Q A+ +
Sbjct: 286 KDATMTDEIVASTTNSILTQSAMAMI 311
>gi|91785674|ref|YP_560880.1| flagellin [Burkholderia xenovorans LB400]
gi|91689628|gb|ABE32828.1| fliC; flagellin [Burkholderia xenovorans LB400]
Length = 381
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 52/351 (14%), Positives = 106/351 (30%), Gaps = 3/351 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +I+ M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQSALSQAITRLSSGKRINSAADDAAGLAISTRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A + +S + I+ +D ++Q E++ +
Sbjct: 61 NQGVSNANDGVSMIQTASSALSSLTSSLQRIRQLAVQASTGSLSASDQAALQKEVSAQIA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG N L GS T + +V + D + + I L +
Sbjct: 121 EVNRIASQTTYNGTNILDGSAGSVTFQVGANVGQTISLDLSQSMSAAKIGGGLVQTGQTV 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + G VL D +A + A
Sbjct: 181 GTIAVSLDATGAYTSTGATITSINVLSDGQGGYTFTDQNNQAITSGVANAIFSAGTGAGT 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ A+ + + + + + + + + A
Sbjct: 241 GTAVTNLTISSTALPTTGAASSAAVASVAQINAINNPPTVSGLDISTVTGANEAMVSIDN 300
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR 348
T + + S +S + +
Sbjct: 301 ALQTVNTLQAALGAAQNRFTAISTSQQAESTDLSSAQSQITDANFAQETAN 351
Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/373 (8%), Positives = 91/373 (24%)
Query: 79 AGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ ++ + A + + + + + +
Sbjct: 9 NSLVAQQNLNGSQSALSQAITRLSSGKRINSAADDAAGLAISTRMQTQINGLNQGVSNAN 68
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ S S + +++ + + ++ + + N
Sbjct: 69 DGVSMIQTASSALSSLTSSLQRIRQLAVQASTGSLSASDQAALQKEVSAQIAEVNRIASQ 128
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
+I + + + A V A
Sbjct: 129 TTYNGTNILDGSAGSVTFQVGANVGQTISLDLSQSMSAAKIGGGLVQTGQTVGTIAVSLD 188
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
++G+ S+ + + + + +
Sbjct: 189 ATGAYTSTGATITSINVLSDGQGGYTFTDQNNQAITSGVANAIFSAGTGAGTGTAVTNLT 248
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ + + + S + +N + + E + ID ++
Sbjct: 249 ISSTALPTTGAASSAAVASVAQINAINNPPTVSGLDISTVTGANEAMVSIDNALQTVNTL 308
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+G+ +R + + ++ DA+ A E+ LS Q QQ + L+
Sbjct: 309 QAALGAAQNRFTAISTSQQAESTDLSSAQSQITDANFAQETANLSKAQVLQQAGISVLAQ 368
Query: 439 VNNSTARILSLFR 451
N++ ++L L +
Sbjct: 369 ANSNPQQVLKLLQ 381
>gi|48716110|dbj|BAD22843.1| flagellin [Campylobacter lari]
Length = 567
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/355 (11%), Positives = 87/355 (24%), Gaps = 15/355 (4%)
Query: 112 ITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG------------ 159
+ L ++ +A + ++T S + S + G
Sbjct: 213 MGALAEEINRVADVTGVRANFLVQTTGAGSIKADKTSQDFTINGVKIGEVEYKDGDENGA 272
Query: 160 ---KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
+ ++ + ++ + V VLKD + S
Sbjct: 273 LISAINSVKDTTGVEASKDANGRLVLNSRDGRGIEITGNMGVGSGVLKDDYKNFGRLSLV 332
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ K L + SG A ++ ++ G + K
Sbjct: 333 KNDGKDILISGSGLSFIGMGAGDMISQASISLRESKGNIDTHIADAMGFNAYKGGGKMVV 392
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ S S + V S
Sbjct: 393 TFSSIEAFMSSDGSGMSAGSGFSIGSGKEMSKIYNSGNLALVTVFSNAFGFSAKNDGSSQ 452
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
T +I ++ +T I +G++ ++I + I
Sbjct: 453 FAAFAGTASIAAKDQQAGVTTLKGAMAVMDIAETAITNLDQIRADLGAVQNQITRTLNNI 512
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + ++ + D D A+ES + Q A+S N ++ L +
Sbjct: 513 SVTQVNIKSAESNIRDVDFAAESANFAKFNILAQSGSYAMSQANAVQQNVMRLLQ 567
Score = 86.3 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 58/383 (15%), Positives = 115/383 (30%), Gaps = 3/383 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNVASLNAQNNANLNSRALDSSLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 64 INNGNDALGILQTADKAMDEQLKILDTIKVKATQAAQDGQSTKTRNMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + + I + + ++ S
Sbjct: 124 NIANTTAFNGKQLLSGGFTNQSFQIGAQSNQTIQASIGATQSSKIGVTRFETGSMSHSSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + I+ + ++ A
Sbjct: 184 VAQLTIKNYNGIDDFKFQPVVISSSVGTGMGALAEEINRVADVTGVRANFLVQTTGAGSI 243
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+A + G S S + +
Sbjct: 244 KADKTSQDFTINGVKIGEVEYKDGDENGALISAINSVKDTTGVEASKDANGRLVLNSRDG 303
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G + VG+ D ++ S + I A ++
Sbjct: 304 RGIEITGNMGVGSGVLKDDYKNFGRLSLVKNDGKDILISGSGLSFIGMGAGDMISQASIS 363
Query: 361 MEEMVSFIDTQIKCATAAAGKIG 383
+ E IDT I A G
Sbjct: 364 LRESKGNIDTHIADAMGFNAYKG 386
>gi|90422617|ref|YP_530987.1| flagellin [Rhodopseudomonas palustris BisB18]
gi|90104631|gb|ABD86668.1| flagellin-like [Rhodopseudomonas palustris BisB18]
Length = 311
Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 75/209 (35%), Positives = 111/209 (53%), Gaps = 4/209 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+S+LTN SAM+A Q LR+++ +L Q+R+S+G RV+ A+DN+AYWSIA M+SDN AL
Sbjct: 1 MSSLLTNTSAMTALQTLRNVSSSLATTQNRISTGYRVATASDNSAYWSIATTMRSDNEAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAI----DVMSTIKNKITAGVERGTDSKSIQSEITQLQ 116
SAVSDA+GLG++ VD ++ + ++ +K K+ A E G D +QSEIT +Q
Sbjct: 61 SAVSDALGLGAATVDTMYTALTSVVGDSKSGLTALKAKLVAAREPGVDRVKVQSEITAIQ 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
L++ A + FNGENWL D + + KSV+ SF R T +
Sbjct: 121 DDLKNTAGLAVFNGENWLSVDSSVTGYNATKSVVSSFTRVGGTVAIKTIDVNIDKLKLYD 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ T + +
Sbjct: 181 PNGGTPAGIMDKTVTVGTATDAVSTIDIH 209
Score = 75.2 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/87 (51%), Positives = 63/87 (72%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ +D + T A+ +G+ +RI +FIK +RDA+++GVG+LVDADM +ESTRL A
Sbjct: 225 IGIVDQALGSVTQASADLGATKTRIDSNSNFIKSLRDAIDRGVGQLVDADMNAESTRLQA 284
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
LQTQQQL +QALSI N+ + ILSLF+
Sbjct: 285 LQTQQQLGIQALSIANSGSQSILSLFK 311
>gi|170694352|ref|ZP_02885506.1| flagellin domain protein [Burkholderia graminis C4D1M]
gi|170140775|gb|EDT08949.1| flagellin domain protein [Burkholderia graminis C4D1M]
Length = 390
Score = 99.0 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/381 (14%), Positives = 118/381 (30%), Gaps = 3/381 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +I+ M++ L
Sbjct: 1 MLGINSNINSLVAQQNLSGSQSALSQAITRLSSGKRINSAADDAAGLAISTRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
G S + A + +S + I+ +D ++Q E+ Q
Sbjct: 61 GQGVSNANDGVSLIQTASSALSSLTSSLQRIRTLAVQASTGTMSSSDQAALQKEVAQQIQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG N L G + +V + D + + ++ L
Sbjct: 121 EVNRIASQTTYNGTNILDGSAGIVGFQVGANVGQTINLDLSKSMSAASLGSGSLATGQLA 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ ++ + +S + + + +++ A +
Sbjct: 181 GTISNLNIDAATGAAATSTPSANIITSINVLSDGHGGFSFTDQNGSAISSAAASTIFSAG 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
A A + A T + S + A S + +T +
Sbjct: 241 AQTNATLGAPVTTLTMNTAAYDQTNAALDKSVLAATAQIGAVNASNTSVSKLDISTVSGA 300
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
++ + V N + + + + S IT
Sbjct: 301 NVAMVAIDNALTAVSNLQASLGAAQNRFSAIATSQQAEATDLSSAQSQITDANFAQETAN 360
Query: 358 KLAMEEMVSFIDTQIKCATAA 378
+ + + + A +
Sbjct: 361 LSKAQVLQQAGISVLAQANSQ 381
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 48/387 (12%), Positives = 110/387 (28%), Gaps = 6/387 (1%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ + +++ +S+AI +S+ K + D + + T++Q+Q+ + +G
Sbjct: 9 NSLVAQQNLSGSQSALSQAITRLSSGK-----RINSAADDAAGLAISTRMQTQINGLGQG 63
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + SS S S + T +
Sbjct: 64 VSNANDGVSLIQTASSALSSLTSSLQRIRTLAVQASTGTMSSSDQAALQKEVAQQIQEVN 123
Query: 186 R-YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKG 244
R N ++ + TI+ K + + +
Sbjct: 124 RIASQTTYNGTNILDGSAGIVGFQVGANVGQTINLDLSKSMSAASLGSGSLATGQLAGTI 183
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
A A ++ S + + + + + ++I S T
Sbjct: 184 SNLNIDAATGAAATSTPSANIITSINVLSDGHGGFSFTDQNGSAISSAAASTIFSAGAQT 243
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
N+T+ T ++ D + + +
Sbjct: 244 NATLGAPVTTLTMNTAAYDQTNAALDKSVLAATAQIGAVNASNTSVSKLDISTVSGANVA 303
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ ID + + +G+ +R + + ++ DA+ A E+ LS
Sbjct: 304 MVAIDNALTAVSNLQASLGAAQNRFSAIATSQQAEATDLSSAQSQITDANFAQETANLSK 363
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ + L+ N+ ++L L +
Sbjct: 364 AQVLQQAGISVLAQANSQPQQVLKLLQ 390
>gi|157101687|gb|ABV23554.1| flagellin B [Bacillus thuringiensis serovar kurstaki]
Length = 285
Score = 99.0 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 67/179 (37%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 68 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEIN 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA ++FNG +L + D I T V D
Sbjct: 128 HIADKTNFNGNAFLNKGTNPDEGKDITIQLSDASSDTMIIAAIETKKLTTANLAVSTDG 186
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 35/84 (41%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+DT I+ A GS +R+ + + + ++ DADMA E + ++ +
Sbjct: 202 LDTAIQNIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKI 261
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
+ + LS N + + L +
Sbjct: 262 LNEAGISMLSQANQTPQMVSKLLQ 285
>gi|110632648|ref|YP_672856.1| flagellin-like [Mesorhizobium sp. BNC1]
gi|110283632|gb|ABG61691.1| flagellin-like protein [Chelativorans sp. BNC1]
Length = 293
Score = 99.0 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 99/190 (52%), Gaps = 1/190 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI+TN SAM A Q L+ N LE VQ R+S+G RV++A+DNAAYWSIA M+SDN AL
Sbjct: 1 MASIMTNTSAMVALQSLKATNKALETVQGRISTGYRVAEASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE-RGTDSKSIQSEITQLQSQL 119
SA+ D++GLG+ ++DIA M I+ + IK K+ + + IQ+EI LQ Q+
Sbjct: 61 SAIQDSLGLGAGRIDIAYTAMDDVIEAVDAIKTKLINARGASAENQEKIQAEIDILQDQI 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ A G+S+ G N L TD A S G + + L
Sbjct: 121 KSAAIGASYAGTNILATDSAGPLDIAASYNRASDGTVSIGTISVDLAGITLFAADGTTTD 180
Query: 180 STDGTERYGL 189
+T +
Sbjct: 181 ATQHLAHDVM 190
Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/138 (34%), Positives = 73/138 (52%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T + + + + A ++ +++ + I+T +
Sbjct: 156 TVSIGTISVDLAGITLFAADGTTTDATQHLAHDVMQIDLVANGDEASIDAYLEDIETALA 215
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ AA +GS +R+ LQ+DF+ + D++E+GVG+LVDADM ESTRL ALQ QQQL +
Sbjct: 216 AMSTAAANLGSAKNRLDLQKDFVSNLMDSIERGVGQLVDADMNEESTRLQALQVQQQLGI 275
Query: 434 QALSIVNNSTARILSLFR 451
QALSI N + ILSLF+
Sbjct: 276 QALSIANQNAQNILSLFK 293
>gi|168183236|ref|ZP_02617900.1| flagellin protein [Clostridium botulinum Bf]
gi|182673613|gb|EDT85574.1| flagellin protein [Clostridium botulinum Bf]
Length = 272
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 70/201 (34%), Gaps = 4/201 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + + A ++ + E V ++VSSG R++ A+D+A+ +I++ K+ LS
Sbjct: 3 IN-NANVLGAFNRITKQKFKNESVVEKVSSGKRINRASDDASGITISESFKAQVRGLSQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
G S + A + + +K D K E +L++ +
Sbjct: 62 GRNTQDGISMLQTVDAALDDISKHLYRMKEIAVKAANDTLTDEDRKLAHEEFKELKNSID 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I+ + FN L+ D + + ++ + I +
Sbjct: 122 EISDKTEFNKIKLLKEDKDLNIQIKDNPYVTYTVKLQAVNTERMDIKDSTVDTFQDASKA 181
Query: 181 TDGTERYGLLDRNHKIKVEPQ 201
++ +++
Sbjct: 182 ISSIDKALNELIKYRVNTGND 202
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 29/92 (31%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +S ID + G+ + + + + + R+ D+D
Sbjct: 172 VDTFQDASKAISSIDKALNELIKYRVNTGNDYNNLCQAFNDSSNSELNLTASLSRVEDSD 231
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARI 446
MAS L + L V +T I
Sbjct: 232 MASSMMNLIKGNVLSEYNKSMLVAVRETTQGI 263
>gi|48716098|dbj|BAD22837.1| flagellin [Campylobacter lari]
Length = 567
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/355 (11%), Positives = 87/355 (24%), Gaps = 15/355 (4%)
Query: 112 ITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG------------ 159
+ L ++ +A + ++T S + S + G
Sbjct: 213 MGALAEEINRVADVTGVRANFLVQTTGAGSIKADKTSQDFTINGVKIGEVEYKDGDENGA 272
Query: 160 ---KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
+ ++ + ++ + V VLKD + S
Sbjct: 273 LISAINSVKDTTGVEASKDANGRLVLNSRDGRGIEITGNMGVGSGVLKDDYKNFGRLSLV 332
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ K L + SG A ++ ++ G + K
Sbjct: 333 KNDGKDILISGSGLSFIGMGAGDMISQASVSLRESKGNIDTHVADAMGFNAYKGGGKMVI 392
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ S S + V S
Sbjct: 393 TFSSIEAFMSSNGSGMSAGSGFSIGSGKEMSKIYNSGNLALVTVFSNAFGFSAKNDGSSQ 452
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
T +I ++ +T I +G++ ++I + I
Sbjct: 453 FAAFAGTASIAAKDQQAGVTTLKGAMAVMDIAETAITNLDQIRADLGAVQNQITRTLNNI 512
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + ++ + D D A+ES + Q A+S N ++ L +
Sbjct: 513 SVTQVNIKSAESNIRDVDFAAESANFAKFNILAQSGSYAMSQANAVQQNVMRLLQ 567
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 78/211 (36%), Gaps = 3/211 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNVASLNAQNNANLNSRALDSSLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 64 INNGNDALGILQTADKAMDEQLKILDTIKVKATQAAQDGQSTKTRNMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + + I + + ++ S
Sbjct: 124 NIANTTAFNGKQLLSGGFTNQSFQIGAQSNQTIQASIGATQSSKIGVTRFETGSMSHSSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ + + +
Sbjct: 184 VAQLTIKNYNGIDDFKFQPVVISSSVGTGMG 214
>gi|90418695|ref|ZP_01226606.1| possible flagellin protein [Aurantimonas manganoxydans SI85-9A1]
gi|90336775|gb|EAS50480.1| possible flagellin protein [Aurantimonas manganoxydans SI85-9A1]
Length = 579
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 69/371 (18%), Positives = 126/371 (33%), Gaps = 2/371 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI TN +AM+A LR + + Q +++G RV AADNA+YWSIA M+SD AL
Sbjct: 1 MISIRTNGAAMTALANLRSLQSASDANQTAMATGYRVGSAADNASYWSIATGMRSDVKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV+DA+GLGS+ D+A M + D+++ IK ++ +E G D + +Q+EI+QLQ+ +
Sbjct: 61 GAVADALGLGSATTDVAYTSMVQVGDMLADIKERLVVAMEPGVDHQKVQAEISQLQAAIV 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++ +SF+G+NWL+T+L + + + + +
Sbjct: 121 ATSQAASFSGQNWLQTNLPDIYETPVDRRSTMLVASLSRSSTSGLSVGTIGVDLQKTSLF 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D + + + S + + + + TF
Sbjct: 181 NVDGGGMLQPDPRSPRTIGGLRFGNTAYYGSPYNTASSVDRTFTFSGPVTFGLSDTMTFT 240
Query: 241 QAKGIATIPVPL--PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
P + + + + + ++ +
Sbjct: 241 MTVDADNPATPGLPGPYDPGQDISVVIDRALVDATTGRTDGVVADYHEMIQVLDAAITGN 300
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ T+ V D +
Sbjct: 301 EVSVGHVTVWNSTTQTYDLVPNAINFRDRETSGKPGASFAIKNFATTASGTGGLGNTATT 360
Query: 359 LAMEEMVSFID 369
+D
Sbjct: 361 YGERASTVTLD 371
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 40/101 (39%), Positives = 63/101 (62%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ D A+E+ + +DT + + A +G+IS R+ +Q +F + + +E+G+ RL
Sbjct: 479 DVDVAANPNAIEDYLQQVDTMQQRVVSGAAVLGAISKRLEMQTEFTRTVTQTLEQGISRL 538
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
VDADM STR AL+ Q+QLAVQ+LS+ N++ LSLFR
Sbjct: 539 VDADMEETSTRYRALEAQRQLAVQSLSLANSTPDIALSLFR 579
>gi|157101683|gb|ABV23551.1| flagellin B [Bacillus thuringiensis serovar kurstaki]
Length = 285
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 67/179 (37%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 68 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEIN 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA ++FNG +L + D I T V D
Sbjct: 128 HIADKTNFNGNAFLNKGTNPDEGKDITIQLSDASSDTMIIAAIETKKLTTANLAVSTDG 186
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 35/84 (41%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+DT I+ A GS +R+ + + + ++ DADMA E + ++ +
Sbjct: 202 LDTAIQNIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKI 261
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
+ + LS N + + L +
Sbjct: 262 LNEAGISMLSQANQTPQMVSKLLQ 285
>gi|218673669|ref|ZP_03523338.1| putative flagellin protein [Rhizobium etli GR56]
Length = 311
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 84/146 (57%), Positives = 105/146 (71%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN++AM+A Q LR +N +L+ Q RVSSG RV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNNAAMAALQTLRGVNDSLKDTQGRVSSGYRVEKAADNAAYWSIATTMRSDNLAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A A M A+DV+S IK KI A E+G D IQ E+ QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYAAMDSALDVVSEIKAKIVAATEKGVDKTKIQQELDQLQEQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA+ +SF+GENW+ G+ + +
Sbjct: 121 SIAQSASFSGENWVAGASGTKSVVSS 146
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/136 (37%), Positives = 77/136 (56%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
T + S + V + + + + ++ ++ I+ +
Sbjct: 175 GMTSTGAIETSSGIIGTAFNGTYGGTVIVMPSIYDLDIIGFTQGQLDAALTGIELVLGAM 234
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
TAA +GSIS+RI LQE+F+ + D+++ G+GRLVDADM ES+RLSALQTQQQL +Q+
Sbjct: 235 TAAGSALGSISTRIQLQENFVSGLHDSIDSGIGRLVDADMEEESSRLSALQTQQQLGIQS 294
Query: 436 LSIVNNSTARILSLFR 451
LSI N+S IL+LFR
Sbjct: 295 LSIANSSAQNILTLFR 310
>gi|157101688|gb|ABV23555.1| flagellin C [Bacillus thuringiensis serovar kurstaki]
Length = 282
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/246 (15%), Positives = 86/246 (34%), Gaps = 3/246 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 68 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEID 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++FNG +L T ++ + + ITT T +
Sbjct: 128 HIADKTNFNGNAFLSGGGKDITIQLSDASNDTMKITAIDTKAITTATLATPTATGADKAL 187
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + I+ + ++ + + + + +A
Sbjct: 188 NAASAPAQITALDTAIQEIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDADMA 247
Query: 241 QAKGIA 246
+
Sbjct: 248 KEMSNM 253
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 45/130 (34%)
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
S + + + TL D + ++ +DT I+ A
Sbjct: 153 SDASNDTMKITAIDTKAITTATLATPTATGADKALNAASAPAQITALDTAIQEIADARAT 212
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
GS +R+ + + + ++ DADMA E + ++ + + + LS N
Sbjct: 213 FGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKILNEAGISMLSQANR 272
Query: 442 STARILSLFR 451
+ + L +
Sbjct: 273 TPQMVSKLLQ 282
>gi|33311213|gb|AAQ03607.1| flagellin [Borrelia burgdorferi]
gi|33311215|gb|AAQ03608.1| flagellin [Borrelia burgdorferi]
gi|33311227|gb|AAQ03614.1| flagellin [Borrelia burgdorferi]
Length = 131
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 3/129 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 3 NAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 62
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 63 NLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 122
Query: 137 DLGSSTASI 145
S
Sbjct: 123 KSASQNVRT 131
>gi|296531757|ref|ZP_06894580.1| flagellin [Roseomonas cervicalis ATCC 49957]
gi|296267915|gb|EFH13719.1| flagellin [Roseomonas cervicalis ATCC 49957]
Length = 585
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 63/407 (15%), Positives = 129/407 (31%), Gaps = 16/407 (3%)
Query: 57 NGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ 116
G+ K+ + ++ V+ ++++ ++T+
Sbjct: 183 LSRADQTFANTNDGTKKLQLTVGA---TGTNLNNGNELDFKYVDSTGTQRTLKVKLTKDI 239
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+ ++ + + + S ++ + ++ T +
Sbjct: 240 NDIQTLVDYLNADSGFSKLFQADRM-FSTGSTLDADTFTISAKNRDVVEYFGNINSTTKV 298
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
++ S T G + T + +
Sbjct: 299 VNYSAIVTVSAGTGSAGSFDAATAASTSLSADMRRLDVSFVDKPLQLGDTFEIKVGSSLD 358
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS----------- 285
A+ + V A ++ S +V A +
Sbjct: 359 QDDATAQFRYILKVVDGAYATGDLLVGDSAYSNINNVYVIAVAASQVTNANVTGKDIATE 418
Query: 286 -DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTL 344
+ + N + G + V + Y E+T I S+++
Sbjct: 419 LQTALITGSANVAATGEGMGGAGADFVTSNDYLAAPEATAGTDFGVYVDAISGKLSIISD 478
Query: 345 NITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVE 404
+ T + + ++ +D+ AA G++ +RI +Q+DF+ + D +
Sbjct: 479 DNTADELYYFNSSLTDYQTLLGKLDSATNTVNNAAASFGTLGTRIDIQKDFLDKLVDTLT 538
Query: 405 KGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
G+G LVDADM+ E+ RL ALQ Q+QL QALSI N + IL+LFR
Sbjct: 539 TGLGALVDADMSEEAARLQALQVQEQLGTQALSIANQAPQSILALFR 585
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 49/146 (33%), Positives = 81/146 (55%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+SILTN+ AM+A Q L+ NL Q+R+S+GL+VS A DNAA W++A M+SD
Sbjct: 3 SSILTNNGAMTALQSLKATQKNLLQTQNRISTGLKVSTAKDNAATWAVATSMRSDIANYK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
VS+ + + SS + A+A + D++ ++ K+TA D + +Q++I L +Q+
Sbjct: 63 QVSENLSVSSSILSTAEAAATTIADLVKQVRTKVTAAQNPAVDKRQVQADIDALLAQINT 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
A +SF G N + + +
Sbjct: 123 TAEAASFKGVNLVNSSGTQRVLTSVN 148
>gi|226950107|ref|YP_002805198.1| flagellin [Clostridium botulinum A2 str. Kyoto]
gi|226843125|gb|ACO85791.1| flagellin [Clostridium botulinum A2 str. Kyoto]
Length = 272
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 70/201 (34%), Gaps = 4/201 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + + + ++ + E V ++VSSG R++ A+D+A+ +I++ K+ LS
Sbjct: 3 IN-NANVLGSFNRITKQKFKNESVVEKVSSGKRINRASDDASGIAISESFKAQVRGLSQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
G S + A + + +K D K E +L++ +
Sbjct: 62 GRNTQDGISMLQTVDAALDDISKHLYRMKEIAVKAANDTLTDEDRKLAHEEFKELKNSID 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I+ + FN L+ D + + ++ + I +
Sbjct: 122 EISDKTEFNKIKLLKEDKDLNIQIKDNPYVTYTVKLQAVNTERMDIKDSTVDTFQDASKA 181
Query: 181 TDGTERYGLLDRNHKIKVEPQ 201
++ +++
Sbjct: 182 ISSIDKALNELIKYRVNTGND 202
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 29/92 (31%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +S ID + G+ + + + + + R+ D+D
Sbjct: 172 VDTFQDASKAISSIDKALNELIKYRVNTGNDYNNLCQAFNDSSNSELNLTASLSRVEDSD 231
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARI 446
MAS L + L V +T I
Sbjct: 232 MASSMMNLIKGNVLSEYNKSMLVAVRETTQGI 263
>gi|52841458|ref|YP_095257.1| flagellar hook-associated protein FlgL [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|52628569|gb|AAU27310.1| flagellar hook associated protein type 3 FlgL [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
Length = 411
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/430 (11%), Positives = 127/430 (29%), Gaps = 36/430 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN L L +QD+ +SG+RV +D+ + +++K +
Sbjct: 3 ISTNQIYQRGLDNLLTQQERLARLQDQQASGIRVRTPSDDPVASAQIELIKQRINNIELF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ S + + + +S A++ + ++ + ++ + Q+ L +
Sbjct: 63 QNNRQAADSALRLEEGILSNAVNSLHRLREIQIQAGNPSLSEEDRKTLAVEAQALLNQLL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N GS + + S+ S NG + D+ +
Sbjct: 123 DYANTKDSNGSYMFSGSKSLTQPVSLNLSGQYVYNGDSTQRFQAVTTSLLVAVNDTGDNV 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
R + I+
Sbjct: 183 FMRIPSGNGRFAIRETLT------------------------------------PNTGTA 206
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+++ V AA N T + + ++ + GN + +
Sbjct: 207 SVSSGSVTNEAAFVPDNYTMTFALNSQGNLVVMVSGTLSGNVIPPSGLPDDAPLYQEGSA 266
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
++ + +S ++ K+ + LN ++ + + +
Sbjct: 267 IGFNGMEMVVSGLPKAGDSFSISPAKNESIFSTVQRMINNLNKPYTSSVEKAATQTENNQ 326
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+++ ID+ + + +G+ +++ E D + +L + D + +T L+
Sbjct: 327 LLAQIDSALGHILSVQSDLGARLNQLETAEKANNDYLDISAATLKKLREIDPVAVATELN 386
Query: 424 ALQTQQQLAV 433
Q A
Sbjct: 387 LQLVNLQAAQ 396
>gi|218778498|ref|YP_002429816.1| flagellin domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218759882|gb|ACL02348.1| Putative flagellin protein [Desulfatibacillum alkenivorans AK-01]
Length = 376
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 43/137 (31%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T ++T + S + + ID +
Sbjct: 239 TMTMSVADATFQVGETNSSDYRISFQLDAMNQTGLSVGAVDLSTLANARSSLDMIDNAMN 298
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
++ IG+I +R+ + + + + + D DMA+E T + Q Q
Sbjct: 299 ALNSSRADIGAIQNRLDYTFANLNIAIENNTAAMSVIQDVDMAAEMTSFTKNQILMQSGT 358
Query: 434 QALSIVNNSTARILSLF 450
L+ N++ +L L
Sbjct: 359 AMLAQANSAPQTVLQLI 375
Score = 96.3 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 49/364 (13%), Positives = 115/364 (31%), Gaps = 2/364 (0%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N SA+ A ++L + + +R+SSGLR++ A D+AA S+++ + + + ++
Sbjct: 8 NISAIGAHRQLGITDSKVSKSLERLSSGLRINRAKDDAAGLSMSRKFDAQVKSQAVAANN 67
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV--ERGTDSKSIQSEITQLQSQLRDIAR 124
+S + IA+ G+ + ++ +K T + + +E TQL +++ IA
Sbjct: 68 TTQANSLLQIAEGGVEQIDAILVRLKELSTQAASKNNEQNLSDLNAEATQLLTEMDRIAS 127
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
++F G + L + +GS + +S
Sbjct: 128 TTTFQGASLLTGYGTKGLVAADAGSVGSVSNMYDFDTSNFKGTDAESIHFTSAGASVITM 187
Query: 185 ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKG 244
G + D S + S +T A + T A
Sbjct: 188 VYTGSGSVETQTLTVGSGGDTYDFSTFGVSFKTTTAADSAALATSVASVGDTMTMSVADA 247
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
+ + + + A + + S + + N++ S
Sbjct: 248 TFQVGETNSSDYRISFQLDAMNQTGLSVGAVDLSTLANARSSLDMIDNAMNALNSSRADI 307
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
+ ++ T ++ + + +++D M + +
Sbjct: 308 GAIQNRLDYTFANLNIAIENNTAAMSVIQDVDMAAEMTSFTKNQILMQSGTAMLAQANSA 367
Query: 365 VSFI 368
+
Sbjct: 368 PQTV 371
>gi|87242390|gb|ABD33734.1| flagellin [Bacillus thuringiensis serovar tochigiensis]
Length = 231
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 68/159 (42%), Gaps = 3/159 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ LS + G S + A + +
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRAHESGLSVAARNTSDGISLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIARGSSFNGENWLRTDL 138
+++ +++ I++ E L+ Q+ ++ + FNG L+
Sbjct: 61 QSVSNILLRMRDIANQTANGTNKDTDIEALGKEFAALKEQITYVSDNTKFNGRELLKGGD 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ + S I+ ++ ++++D ++
Sbjct: 121 DINIQTYDGSDESQQIKIKISELDLSSLDTGEVTDSDTA 159
Score = 64.8 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 33/83 (39%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+T + VS +D I + ++G+ +R+ + ++ ++
Sbjct: 149 DTGEVTDSDTARGTVSTLDDAITNIASKRAELGATLNRLDYNTQNVNSEAASMAASASQI 208
Query: 411 VDADMASESTRLSALQTQQQLAV 433
DADMA E + ++ + + +
Sbjct: 209 EDADMAKEMSEMTKFKILSEAGI 231
>gi|159894870|gb|ABX09791.1| flagellin [Borrelia valaisiana]
Length = 304
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 3/139 (2%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+AS+ NL Q+++SSG R++ A+D+AA ++ + + LS S
Sbjct: 1 NASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAI 60
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSF 128
+ + + +++ V+ +K D SIQ EI QL ++ IA + +
Sbjct: 61 NFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQY 120
Query: 129 NGENWLRTDLGSSTASIAK 147
N + L + A+
Sbjct: 121 NQMHMLSNKSAAQNVKTAE 139
Score = 51.7 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/185 (7%), Positives = 44/185 (23%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + A T+ G + + A+ S N +
Sbjct: 119 QYNQMHMLSNKSAAQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 178
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + +
Sbjct: 179 IYAANVANLFSGEGAQSAQAAPVQEGAQQEGAQQPAPATAPAQGGVNSPVNVTTTVDANT 238
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ I+ I+ + +G+ +R+ ++ + ++ ++ DA M E +
Sbjct: 239 SFAKIENAIRMVSDQRANLGAFQNRLESIKNSTVYAIENLKASYAQIKDATMTDEVVAAT 298
Query: 424 ALQTQ 428
Sbjct: 299 TNSIL 303
>gi|222095382|ref|YP_002529442.1| flagellin [Bacillus cereus Q1]
gi|221239440|gb|ACM12150.1| flagellin [Bacillus cereus Q1]
Length = 266
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 58/169 (34%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A++N A +I M + +
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNHASNNPANVAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +V+ +++ + S+ E L Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVTNVLQRMRDVAVQSANGTNSSKNRDSLNKEFQSLTEQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + + T + Q
Sbjct: 123 YIDETTEFNDLSVFDGQNRTVTLDDIGHTVNVTKHIPPSPTQHDINIST 171
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 69/239 (28%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T + +
Sbjct: 27 MEHLATGKKLNHASNNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNV 86
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + T T + + + L
Sbjct: 87 LQRMRDVAVQSANGTNSSKNRDSLNKEFQSLTEQIGYIDETTEFNDLSVFDGQNRTVTLD 146
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + I+ ++ + +G++ +R+
Sbjct: 147 DIGHTVNVTKHIPPSPTQHDINISTEQEARAAIRKIEEALQNVSLHRADLGAMINRLQFN 206
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 207 IENLNSQSTALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSKLLQ 265
>gi|159894868|gb|ABX09790.1| flagellin [Borrelia valaisiana]
gi|159894872|gb|ABX09792.1| flagellin [Borrelia valaisiana]
gi|159894874|gb|ABX09793.1| flagellin [Borrelia valaisiana]
gi|159894876|gb|ABX09794.1| flagellin [Borrelia valaisiana]
Length = 304
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 3/139 (2%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+AS+ NL Q+++SSG R++ A+D+AA ++ + + LS S
Sbjct: 1 NASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAI 60
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSF 128
+ + + +++ V+ +K D SIQ EI QL ++ IA + +
Sbjct: 61 NFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQY 120
Query: 129 NGENWLRTDLGSSTASIAK 147
N + L + A+
Sbjct: 121 NQMHMLSNKSAAQNVKTAE 139
Score = 54.0 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 14/185 (7%), Positives = 47/185 (25%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + A T+ G + + A+ S N +
Sbjct: 119 QYNQMHMLSNKSAAQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 178
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + + +
Sbjct: 179 IYAANVANLFSGEGAQSAQAAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 238
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E +
Sbjct: 239 SLAKIENAIRMVSDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAAT 298
Query: 424 ALQTQ 428
Sbjct: 299 TNSIL 303
>gi|218778497|ref|YP_002429815.1| flagellin domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218759881|gb|ACL02347.1| Putative flagellin protein [Desulfatibacillum alkenivorans AK-01]
Length = 376
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 44/137 (32%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T ++T + S + + ID +
Sbjct: 239 TITASVADATFQVGETNSSDYRISFQLNAMNQTGLSVGNVDMSTLANARSSLDMIDNAMT 298
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A+ +IG+I +R+ + + + + + D DMA E T + Q Q
Sbjct: 299 ALNASRAEIGAIQNRLDYTFANLNIAIENNTAAMSVIQDVDMAMEMTTFTKNQILMQSGT 358
Query: 434 QALSIVNNSTARILSLF 450
L+ N++ ILSL
Sbjct: 359 AMLAQANSAPQNILSLI 375
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 46/364 (12%), Positives = 114/364 (31%), Gaps = 2/364 (0%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N +A++A ++L + + +R+SSG R++ A D+AA S+A+ + + + ++
Sbjct: 8 NIAAVNAHRQLGVTDSKVSKSLERLSSGFRINRAKDDAAGLSMARKFDAQVRSQAVAANN 67
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV--ERGTDSKSIQSEITQLQSQLRDIAR 124
+S + IA+ G+ + ++ +K T + + +E QL +++ IA
Sbjct: 68 TTQANSLLQIAEGGVEQIDAILVRLKELSTQAASKNNEQNLSDLNAEAQQLLTEMDRIAN 127
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
++F G + L + +GS + + +S
Sbjct: 128 TTTFQGASLLTGYGTKGLVAADAGSVGSVSNMYDFDISNFKGTDAESIHFTSDGASVITM 187
Query: 185 ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKG 244
G + D S + S +T A + T A
Sbjct: 188 VYTGSGTVETQTLTVGSGGDTYDFSTFGVSFKTTTAADSAALATSVASVGDTITASVADA 247
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
+ + + + + + + S + + ++ +
Sbjct: 248 TFQVGETNSSDYRISFQLNAMNQTGLSVGNVDMSTLANARSSLDMIDNAMTALNASRAEI 307
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
+ ++ T ++ + + +++D M T +
Sbjct: 308 GAIQNRLDYTFANLNIAIENNTAAMSVIQDVDMAMEMTTFTKNQILMQSGTAMLAQANSA 367
Query: 365 VSFI 368
I
Sbjct: 368 PQNI 371
>gi|98515|pir||S24986 flagellin B chain - Bacillus thuringiensis
gi|1588479|prf||2208416B flagellin
Length = 280
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 67/179 (37%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 3 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 63 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA ++FNG +L + D I T V D
Sbjct: 123 HIADKTNFNGNAFLNKGTNPDEGKDITIQLSDASSDTMIIAAIETKKLTTATLAVSTDG 181
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 35/84 (41%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+DT I+ A GS +R+ + + + ++ DADMA E + ++ +
Sbjct: 197 LDTAIQNIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKI 256
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
+ + LS N + + L +
Sbjct: 257 LNEAGISMLSQANQTPQMVSKLLQ 280
>gi|228938872|ref|ZP_04101472.1| Flagellin [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228820721|gb|EEM66746.1| Flagellin [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|281484884|gb|ADA70307.1| flagellin B [Bacillus thuringiensis serovar berliner]
Length = 269
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 56/169 (33%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q L + + V + +++G +++ A+DN A I M + +
Sbjct: 6 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNHASDNPANIVIVTRMYARASGMRVA 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ T+ S+ E L +
Sbjct: 66 IRNNEDAISMLRTAEAALQTVTNILQHMRDFAIQSANGTNSNTNRDSLNKEFQSLTEPIG 125
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T I Q
Sbjct: 126 YIGETTEFNDLSVFDGQNRPITLDDIGHTINMTKHIPPSPTQHDIKIST 174
Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 70/239 (29%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + + +A G+ A + T + +
Sbjct: 30 MEHLATGKKLNHASDNPANIVIVTRMYARASGMRVAIRNNEDAISMLRTAEAALQTVTNI 89
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + + T T + + + L
Sbjct: 90 LQHMRDFAIQSANGTNSNTNRDSLNKEFQSLTEPIGYIGETTEFNDLSVFDGQNRPITLD 149
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + I+ ++ + +GS+ +R+
Sbjct: 150 DIGHTINMTKHIPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGSMINRLQFN 209
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ ++ DADMA E + + +A+ +S N + L +
Sbjct: 210 IENLNSQSMALIDTASQVEDADMAQEISDFLKFKLLTAVALSVVSQANQIPQIVSKLLQ 268
>gi|159894878|gb|ABX09795.1| flagellin [Borrelia valaisiana]
Length = 304
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 3/139 (2%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+AS+ NL Q+++SSG R++ A+D+AA ++ + + LS S
Sbjct: 1 NASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAI 60
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSF 128
+ + + +++ V+ +K D SIQ EI QL ++ IA + +
Sbjct: 61 NFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQY 120
Query: 129 NGENWLRTDLGSSTASIAK 147
N + L + A+
Sbjct: 121 NQMHMLSNKSAAQNVKTAE 139
Score = 54.0 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 14/185 (7%), Positives = 47/185 (25%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + A T+ G + + A+ S N +
Sbjct: 119 QYNQMHMLSNKSAAQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVRANQDEAIAVN 178
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + + +
Sbjct: 179 IYAANVANLFSGEGAQSAQAAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 238
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E +
Sbjct: 239 SLAKIENAIRMVSDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAAT 298
Query: 424 ALQTQ 428
Sbjct: 299 TNSIL 303
>gi|115381356|gb|ABI96361.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Muenchen]
Length = 154
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 3/130 (2%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L +R+SSGLR+ A D+AA +IA ++ L+ S G S +
Sbjct: 1 QSALGTAIERLSSGLRIKRAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGA 60
Query: 81 MSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ + + ++ SIQ+EITQ +++ ++ + FNG L D
Sbjct: 61 LNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQD 120
Query: 138 LGSSTASIAK 147
+ A
Sbjct: 121 NTLTIQVGAN 130
>gi|110349485|gb|ABG73223.1| flagellin [Borrelia persica]
Length = 242
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++AS+ NL Q+++SSG R++ A+D+AA +A + + LS S
Sbjct: 1 INASRNNAINVANLSKTQEKLSSGYRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKA 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSS 127
+ + + +++ V+ +K D SIQ EI QL ++ IA +
Sbjct: 61 INFIQTTEGNLNEVEQVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQ 120
Query: 128 FNGENWLRTDLGSSTASIAK 147
+N L + A+
Sbjct: 121 YNQMRMLSNKSAADNVKTAE 140
>gi|225620418|ref|YP_002721675.1| flagellar filament core protein flaB2 [Brachyspira hyodysenteriae
WA1]
gi|225215237|gb|ACN83971.1| Flagellar filament core protein flaB2 [Brachyspira hyodysenteriae
WA1]
Length = 259
Score = 98.7 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 59/155 (38%), Gaps = 3/155 (1%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
+SSG+R++ A D+A+ ++++ M++ L G S + + + ++ D+
Sbjct: 1 MAALSSGMRINRAGDDASGLAVSEKMRTQIRGLRQAERNTQDGISFIQTTEGYLQESQDI 60
Query: 88 MSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ I+ D IQ E++QL ++ IA + FN N L +
Sbjct: 61 LQRIRELAVQSANGIYTDADRMLIQVEVSQLVDEVNRIASHAQFNTLNMLTGRFSNPNEG 120
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
A F N + + + L +
Sbjct: 121 GAPVASMWFHIGANMDERRRVYIGTMTAAALGLQT 155
Score = 92.9 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 21/166 (12%), Positives = 49/166 (29%)
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
++ A+ T + + G + + I + +
Sbjct: 94 EVNRIASHAQFNTLNMLTGRFSNPNEGGAPVASMWFHIGANMDERRRVYIGTMTAAALGL 153
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
T + + + +D + + +G+ +R+ L + + +
Sbjct: 154 QTAEGTGISISSIDKANSAIGIVDEALTKVSKQRSNLGAYQNRLELTAQGLMIAYENTAA 213
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D DMA S + + Q Q + L+ N L L +
Sbjct: 214 SESRIRDTDMAETSVKFAKDQILSQANLAMLAQANTMNQGALRLIQ 259
>gi|312274360|gb|ADQ57420.1| flagellin [Borrelia persica]
Length = 242
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++AS+ NL Q+++SSG R++ A+D+AA +A + + LS S
Sbjct: 1 INASRNNAINVANLSKTQEKLSSGYRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKA 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSS 127
+ + + +++ V+ +K D SIQ EI QL ++ IA +
Sbjct: 61 INFIQTTEGNLNEVEQVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQ 120
Query: 128 FNGENWLRTDLGSSTASIAK 147
+N L + A+
Sbjct: 121 YNQMRMLSNKSAADNVKTAE 140
>gi|222084877|ref|YP_002543406.1| flagellin protein [Agrobacterium radiobacter K84]
gi|221722325|gb|ACM25481.1| flagellin protein [Agrobacterium radiobacter K84]
Length = 306
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 87/211 (41%), Positives = 120/211 (56%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN +AMSA Q LR I+ NLE Q+RVSSG RV+ A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNDAAMSALQTLRSISTNLEDTQNRVSSGYRVAKASDNAAYWSIATTMRSDNSAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A M +I ++ IK+K+ A E D +Q EI+QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYTAMDNSITIVQQIKDKLVAATENSVDKADVQEEISQLQQQLE 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA+ +SF+G+NW+ G+S + ++ V + + D+S
Sbjct: 121 SIAQSASFSGQNWMIAADGASASVVSSFVRNNDGSVAVNSTSYSFDTGSAGNVMFGADAS 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
G+L I + +D++
Sbjct: 181 GTIDTTSGILGTKQDINGTSYSVFSLDITDM 211
Score = 75.2 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 70/113 (61%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ + + + + + ++ + + + T+ A ++GS+S+RI LQ F+
Sbjct: 194 QDINGTSYSVFSLDITDMTSGDIAQAMNLVQSALNTMTSTASQLGSLSTRIDLQTSFVSA 253
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D ++ GVG+LVDA+M ES++L+ALQTQQQLA+Q+L I N+S +L+LF+
Sbjct: 254 LSDTIDSGVGKLVDANMEEESSKLTALQTQQQLAIQSLQIANSSAQNVLALFK 306
>gi|196038950|ref|ZP_03106257.1| A-type flagellin [Bacillus cereus NVH0597-99]
gi|196030095|gb|EDX68695.1| A-type flagellin [Bacillus cereus NVH0597-99]
Length = 266
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 57/169 (33%), Gaps = 3/169 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A + L + + V + +++G +++ A++N A +I M + +
Sbjct: 3 IGTNVLSMNARRSLYENEQRMNVAMEHLATGKKLNHASNNPANIAIVTRMHARASGMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L Q+
Sbjct: 63 IRNNEDALSMLRTAEAALQTMTNILQRMRDLAVQSANGTNSNKNRNSLNKEFQSLTEQIS 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + FN + T + Q
Sbjct: 123 YIGETTEFNDLSVFDGQNRPVTLDDIGHTVNVTKHISPSPTQHDINIST 171
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/247 (10%), Positives = 71/247 (28%)
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ + KK A+ + A + +A G+ A + T
Sbjct: 19 NEQRMNVAMEHLATGKKLNHASNNPANIAIVTRMHARASGMRVAIRNNEDALSMLRTAEA 78
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ + + + + T T + +
Sbjct: 79 ALQTMTNILQRMRDLAVQSANGTNSNKNRNSLNKEFQSLTEQISYIGETTEFNDLSVFDG 138
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+ L + ++ + + + + + I+ ++ + +G+
Sbjct: 139 QNRPVTLDDIGHTVNVTKHISPSPTQHDINISTEQKARAAIRKIEEALQNVSLHRADLGA 198
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
+ +R+ + + A+ R+ DADMA E + + ++A+ +S N
Sbjct: 199 MMNRLQFNIENLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQ 258
Query: 445 RILSLFR 451
+ L +
Sbjct: 259 MVSKLLQ 265
>gi|33311201|gb|AAQ03601.1| flagellin [Borrelia burgdorferi]
gi|33311211|gb|AAQ03606.1| flagellin [Borrelia burgdorferi]
gi|33311217|gb|AAQ03609.1| flagellin [Borrelia burgdorferi JD1]
gi|33311225|gb|AAQ03613.1| flagellin [Borrelia burgdorferi]
gi|33311233|gb|AAQ03617.1| flagellin [Borrelia burgdorferi]
Length = 132
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 3/130 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 3 NAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 62
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 63 NLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 122
Query: 137 DLGSSTASIA 146
S A
Sbjct: 123 KSASQNVRTA 132
>gi|46019722|emb|CAG25466.1| flagellin [Bacillus thuringiensis serovar alesti]
Length = 280
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 67/179 (37%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 3 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 63 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA ++FNG +L + D I T V D
Sbjct: 123 HIADKTNFNGNAFLNKGTNPDEGKDITIQLSDASSDTMIIAAIETKKLTTANLAVSTDG 181
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 35/84 (41%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+DT I+ A GS +R+ + + + ++ DADMA E + ++ +
Sbjct: 197 LDTAIQNIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKI 256
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
+ + LS N + + L +
Sbjct: 257 LNEAGISMLSQANQTPQMVSKLLQ 280
>gi|157101693|gb|ABV23559.1| flagellin C [Bacillus thuringiensis serovar kurstaki]
Length = 282
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/246 (15%), Positives = 86/246 (34%), Gaps = 3/246 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 68 ARNTQDAVSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDEEYQALAQEID 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++FNG +L T ++ + + ITT T +
Sbjct: 128 HIADKTNFNGNAFLSGGGKDITIQLSDASNDTMKITAIDTKAITTATLATPTATGADKAL 187
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + I+ + ++ + + + + +A
Sbjct: 188 NAASAPAQITALDTAIQEIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDADMA 247
Query: 241 QAKGIA 246
+
Sbjct: 248 KEMSNM 253
Score = 90.2 bits (221), Expect = 7e-16, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 45/130 (34%)
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
S + + + TL D + ++ +DT I+ A
Sbjct: 153 SDASNDTMKITAIDTKAITTATLATPTATGADKALNAASAPAQITALDTAIQEIADARAT 212
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
GS +R+ + + + ++ DADMA E + ++ + + + LS N
Sbjct: 213 FGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKILNEAGISMLSQANQ 272
Query: 442 STARILSLFR 451
+ + L +
Sbjct: 273 TPQMVSKLLQ 282
>gi|5668686|dbj|BAA82635.1| flagellin protein [Borrelia sinica]
Length = 323
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 58/136 (42%), Gaps = 3/136 (2%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ + NL Q+++SSG R++ A+D+AA +++ + + LS S + +
Sbjct: 1 RNIGINAANLSKTQEKLSSGHRINRASDDAAGMAVSGKINAQIRGLSQASRNTSKAINFI 60
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGE 131
+ +++ V+ +K D SIQ EI QL ++ IA + +N
Sbjct: 61 QTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQYNQM 120
Query: 132 NWLRTDLGSSTASIAK 147
+ L S A+
Sbjct: 121 HMLSNKSASQNVRTAE 136
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 20/208 (9%), Positives = 56/208 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 116 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 175
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ T + + + +
Sbjct: 176 IYAANVANLFAGEGAQTTQAAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 235
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E +
Sbjct: 236 SLAKIENAIRMVSDQRSNLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAAT 295
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q + ++ N +LSL R
Sbjct: 296 TNSILTQSVMAMIAQANQVPQYVLSLLR 323
>gi|296123593|ref|YP_003631371.1| flagellin domain protein [Planctomyces limnophilus DSM 3776]
gi|296015933|gb|ADG69172.1| flagellin domain protein [Planctomyces limnophilus DSM 3776]
Length = 716
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 73/209 (34%), Gaps = 4/209 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN A+ + L+ R+S+G++V+ DN A + +K +
Sbjct: 1 MTRINTNIDALRGLRNLQKATSQQNSALTRLSTGVKVNSGRDNPAGLFAGERLKLQTTTI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE----RGTDSKSIQSEITQLQ 116
++ + A A + + ++ ++ + G+ +++ + Q EI ++
Sbjct: 61 EKSISNSNRANNVLSTADAALGEISGQLNKLRGLVQEGLNVGALSSSETTANQGEIDEIL 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
S + I+ ++F G+ + G T+ + N V + L+
Sbjct: 121 SAINRISSNTTFAGDKLIDGSKGFQTSVSVGDLDKFSDFQVNQAVFGSRTSIALNATVNT 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
G L +++
Sbjct: 181 AAEKASLRYSGGALTSAATVEIGGSTGNQ 209
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSIS-SRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+++VS ID ++ T +IG++ + I + + + + +VD D A+E
Sbjct: 624 TYDDLVSIIDESLERVTTLRSQIGAVQSNVIDTNISTLGVALENISAARSEIVDTDFAAE 683
Query: 419 STRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ L Q Q + LSI N + I L R
Sbjct: 684 TANLQKAQVLVQAGISVLSIANQGPSTIAQLLR 716
>gi|1741965|dbj|BAA12719.1| flagellin protein [Borrelia turdi]
Length = 292
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 2 NAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 61
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 62 NLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 121
Query: 137 DLGSSTASIAK 147
S A+
Sbjct: 122 KSSSQNVRTAE 132
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/176 (7%), Positives = 46/176 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 112 QYNQMHMLSNKSSSQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 171
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + + +
Sbjct: 172 IYAANVANLFSGEGAQSAQAAPVQEGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 231
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E
Sbjct: 232 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEV 287
>gi|306516607|gb|ADM96192.1| FlaA [Campylobacter coli]
Length = 206
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 78/204 (38%), Gaps = 3/204 (1%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN +A++A + L+ R+SSGLR++ AAD+A+ +IA +++ L
Sbjct: 3 NTNGAALNAKANSDLNSKALDQSLARLSSGLRINSAADDASGMAIADSLRTQASTLGQAI 62
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ +S + A M + + ++ TIK K T + G +Q++I +L +L +
Sbjct: 63 NNGNDAASILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDN 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA +SFNG+ L + I + + + + DS T
Sbjct: 123 IANTTSFNGKQLLSGSFINQEFQIGAQSNQTIKASIGATQSSKIGVTRFETGSQISDSGT 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKD 205
+
Sbjct: 183 AQITIKNYNGIEDFKFQSVVISTS 206
>gi|300086805|gb|ADJ67734.1| FlaB [Borrelia hermsii]
Length = 310
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 3/140 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++AS+ NL Q+++SSG R++ A+D+AA +A + + LS S
Sbjct: 1 INASRNNSINATNLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKA 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSS 127
+ + + +++ V+ +K D SIQ EI QL ++ IA +
Sbjct: 61 INFIQTTEGNLNEVERVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQ 120
Query: 128 FNGENWLRTDLGSSTASIAK 147
+N + L + A+
Sbjct: 121 YNQMHMLSNKSAAQNVKTAE 140
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 16/154 (10%), Positives = 46/154 (29%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G+ W + + N + V N ++ + + +
Sbjct: 157 GSQASWTLRVHVGANQDEAIAVNIYASNVANLFAGEGAQAAPVQEIGQQEEGQAAPAPAA 216
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + ++ I+ I+ + +G+ +R+ +D + +
Sbjct: 217 APAQGGVNSPINVTTAVDANMSLAKIEGAIRMVSDQRANLGAFQNRLESIKDSTEYAIEN 276
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
++ ++ DA M E + Q A+ +
Sbjct: 277 LKASYAQIKDATMTDEVVASTTHSILTQSAMAMI 310
>gi|853587|gb|AAC41457.1| flagellin [Helicobacter mustelae]
gi|1097679|prf||2114309A flagellin
Length = 482
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 75/197 (38%), Gaps = 3/197 (1%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
L+ +++SSGLR++ AAD+A+ +I+ ++S AL G +
Sbjct: 1 TSAGATQLGLKNSLEKLSSGLRINKAADDASGMTISDSLRSQASALGQAISNANDGIGII 60
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGE 131
+A M + + ++ TIK K T + G K+IQS+I +L L +I +S+NG+
Sbjct: 61 QVADKAMDEQLKILDTIKVKATQAAQDGQSLESRKAIQSDIIRLIQGLDNIGNTTSYNGQ 120
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
+ L + I S ++ ++ +S +
Sbjct: 121 SLLSGQWTNKEFQIGTYSNQSIKVSVGSTTSDKIGQVRINTGAMITAASEATLTFKQING 180
Query: 192 RNHKIKVEPQVLKDIDV 208
++ +
Sbjct: 181 GGTSPLEGVKISHSVGT 197
Score = 64.4 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 28/76 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ D+ K +GS+ ++ + I + + V+ R+ + D
Sbjct: 407 VTTLVGAMLVMDIADSARKTLDKIRSDLGSVQGQMVSTVNNISVTQVNVKAAESRMREVD 466
Query: 415 MASESTRLSALQTQQQ 430
A+ES + Q
Sbjct: 467 FAAESAEFNKYNILAQ 482
>gi|241206930|ref|YP_002978026.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860820|gb|ACS58487.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 311
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 83/146 (56%), Positives = 105/146 (71%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN++AM+A Q LR +N +L+ Q RVSSG RV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNNAAMAALQTLRGVNDSLKDTQGRVSSGYRVEKAADNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A + M A+DV+S IK KI A E+G D IQ E+ QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYSAMDSALDVVSDIKAKIVAATEKGVDKTKIQQELDQLQEQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA+ +SF+GENW+ G+ + +
Sbjct: 121 SIAQSASFSGENWVAGASGTKSVVSS 146
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 78/136 (57%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
T + S + S V + + + + ++ ++ ++ +
Sbjct: 175 GMTSTGAIETSSGIIGTAFNGTYGSTVIVMASIYDLDITGFTQGQLDAALTGVELVLGAM 234
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
TAA +GSIS+RI LQE F+ + D+++ GVGRLVDADM ES+RLSALQTQQQLA+Q+
Sbjct: 235 TAAGSALGSISTRIQLQETFVSGLHDSIDSGVGRLVDADMEEESSRLSALQTQQQLAIQS 294
Query: 436 LSIVNNSTARILSLFR 451
LSI N+S IL+LFR
Sbjct: 295 LSIANSSAQNILTLFR 310
>gi|327399778|ref|YP_004340647.1| flagellin domain-containing protein [Hippea maritima DSM 10411]
gi|327182407|gb|AEA34588.1| flagellin domain protein [Hippea maritima DSM 10411]
Length = 596
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/391 (13%), Positives = 111/391 (28%), Gaps = 11/391 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A + L + N L + +R+S+GLR++ AAD+AA +IA +K + L
Sbjct: 5 INTNIAAQYSVFNLNNTNNKLSLSLNRLSTGLRITKAADDAAGMTIADGLKFQSMNLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ + IA + K+ID++ TI K D +++Q+EI +L ++
Sbjct: 65 INNGNNAVKLIQIADMALQKSIDIVQTISQKAAQAANATEDPSSREALQAEINKLIEEVN 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +S+ L + I + + + + +
Sbjct: 125 NIANTTSYKDTKLLDGTFTNKIVHIGAYMNQTLSIGAQRTAADSIGWVAQTTSSNHDTYT 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + + ++ + ++ + K A +
Sbjct: 185 TSIQDASNSSTEYLQFNTNTNFVELKGGDLTINGIDVANYAAGIDADHQLSAKTMAAAIN 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + + + + I N + +
Sbjct: 245 KVQSETGGVEADATTTVTGSAEITAGTITAGTFKINGVDIGQVNVTAGDADGALVNKINQ 304
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
VA ++ V T + + T H T +
Sbjct: 305 YSDQTGVVASTDSSGRLVLTAEDGRNIAITADSTAQGILHLSDTETTIHGTTSTIATAMT 364
Query: 361 ME--------EMVSFIDTQIKCATAAAGKIG 383
+ + G
Sbjct: 365 FYLNGTQISLSANETAASAVTDINNTLASAG 395
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 52/384 (13%), Positives = 114/384 (29%)
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSS 127
L + +D+A D + K A + +++ ++++ T + +I G+
Sbjct: 213 DLTINGIDVANYAAGIDADHQLSAKTMAAAINKVQSETGGVEADATTTVTGSAEITAGTI 272
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
G + A G+ + N T + D L+ ++ DG
Sbjct: 273 TAGTFKINGVDIGQVNVTAGDADGALVNKINQYSDQTGVVASTDSSGRLVLTAEDGRNIA 332
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
D + + + T T S + + A +
Sbjct: 333 ITADSTAQGILHLSDTETTIHGTTSTIATAMTFYLNGTQISLSANETAASAVTDINNTLA 392
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
A TSG+ S + S ++T
Sbjct: 393 SAGIDTTKLYAELYTSGSGHYVKLVANDGRDLNIYVASGQAAASHLDFLGLSSATANHNT 452
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
++++ T ++ + K G ++ + + + E +
Sbjct: 453 RYIANSSNHGTITLTSMDNIEISGDKAAVGGLKTSVVSPNNNLESVDVTSQSGAELAIKI 512
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+ +K + +G+I ++I + I + + + + D + A ES+ S LQ
Sbjct: 513 AQSALKDLDSIRSNLGAIQNQIQATVENISVTQININGAESTIRDVNFAQESSNFSKLQI 572
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
Q AL+ N +L L +
Sbjct: 573 LAQSGTYALAQSNAVQQNVLRLLQ 596
>gi|229078942|ref|ZP_04211494.1| Flagellin [Bacillus cereus Rock4-2]
gi|228704356|gb|EEL56790.1| Flagellin [Bacillus cereus Rock4-2]
Length = 334
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 76/181 (41%), Gaps = 3/181 (1%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + M+ ++
Sbjct: 1 MDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAMNSVSNI 60
Query: 88 MSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ +++ + ++Q E + LQ Q+ I+ + FN ++ L+ D + +
Sbjct: 61 LLRMRDIANQSANGTNTADNKDALQKEFSALQKQITYISENTQFNDKDLLKEDNTINIQT 120
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ S I + V + + + T + + K++ +
Sbjct: 121 LDSSNKDQQIGVELKAVTLEKLGINEISIAADKATPTTPVDLTAFKNAIAKLESPDATDR 180
Query: 205 D 205
D
Sbjct: 181 D 181
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 50/133 (37%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D E+ + K + D+ + + D K V ID +K +
Sbjct: 202 DAEAISKAFTKFDGAKDDTNATAIFTAAKDVKVADTDATKENSLNAVKQIDEALKTIASN 261
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+G+ +R+ + +K ++ ++ DADMA E + ++ + + + LS
Sbjct: 262 RATLGATLNRLDFNVNNLKSQSASMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQ 321
Query: 439 VNNSTARILSLFR 451
N + + L +
Sbjct: 322 ANQTPQMVSKLLQ 334
>gi|163758022|ref|ZP_02165110.1| flagellin protein [Hoeflea phototrophica DFL-43]
gi|162284311|gb|EDQ34594.1| flagellin protein [Hoeflea phototrophica DFL-43]
Length = 324
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 101/291 (34%), Positives = 143/291 (49%), Gaps = 2/291 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI+TN SAM+A Q LR IN ++E Q R+SSG +V A+DN+AYWSIA M+SDN AL
Sbjct: 1 MTSIMTNSSAMAALQTLRSINNDMESTQSRISSGYKVGSASDNSAYWSIATTMRSDNQAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S V DA+GLG++KVD+A GM AI+V+S IK K+ A E G D I EIT+L++QL
Sbjct: 61 STVQDALGLGAAKVDVAYTGMESAIEVVSEIKAKLVAAREPGVDKTKIDKEITELKNQLV 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A +SF+GENWL AS K+V+G F RD +G+V ITT+D T++ +
Sbjct: 121 SVAESASFSGENWLNNTTT--AASGTKNVVGGFNRDSSGQVTITTLDVNTTSTTLIGAGN 178
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+D N + S T + + + A A
Sbjct: 179 ESLGILTKDIDANALDPDATTTTARDYYLIDTGSTTGTQASGTAISLTSATTDAQVEDMI 238
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
+A + A+ + + +A +G
Sbjct: 239 RAVDSMFTQMTDAASNLGAVNKRISMQEDFVANLQNAIDKGVGRLVDADMN 289
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/203 (28%), Positives = 93/203 (45%)
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
+ + T+ + + T+ G N ++
Sbjct: 122 VAESASFSGENWLNNTTTAASGTKNVVGGFNRDSSGQVTITTLDVNTTSTTLIGAGNESL 181
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ + + ID+G + T + + +E+M+ +
Sbjct: 182 GILTKDIDANALDPDATTTTARDYYLIDTGSTTGTQASGTAISLTSATTDAQVEDMIRAV 241
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D+ T AA +G+++ RI +QEDF+ +++A++KGVGRLVDADM ESTRL ALQTQ
Sbjct: 242 DSMFTQMTDAASNLGAVNKRISMQEDFVANLQNAIDKGVGRLVDADMNEESTRLKALQTQ 301
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQL +QALSI N+++ +LSLFR
Sbjct: 302 QQLGIQALSIANSNSQNVLSLFR 324
>gi|110349489|gb|ABG73225.1| flagellin [Borrelia persica]
gi|312274366|gb|ADQ57423.1| flagellin [Borrelia persica]
Length = 243
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++AS+ NL Q+++SSG R++ A+D+AA +A + + LS S
Sbjct: 1 INASRNNAINVANLSKTQEKLSSGYRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKA 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSS 127
+ + + +++ V+ +K D SIQ EI QL ++ IA +
Sbjct: 61 INFIQTTEGNLNEVEQVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQ 120
Query: 128 FNGENWLRTDLGSSTASIAK 147
+N L + A+
Sbjct: 121 YNQMRMLSNKSAADNVKTAE 140
>gi|156622698|dbj|BAF76330.1| flagellin protein [Borrelia garinii]
Length = 312
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 3/140 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS S
Sbjct: 1 INASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKA 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSS 127
+ + + +++ V+ +K D SIQ EI QL ++ IA +
Sbjct: 61 INFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQ 120
Query: 128 FNGENWLRTDLGSSTASIAK 147
+N + L S A+
Sbjct: 121 YNQMHMLSNKSASQNVRTAE 140
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 17/193 (8%), Positives = 51/193 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 120 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 179
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 180 IYAANVANLFSGEGAQAAQTAPVQEGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 239
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E +
Sbjct: 240 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAAT 299
Query: 424 ALQTQQQLAVQAL 436
Q A+ +
Sbjct: 300 TNSILTQSAMAMI 312
>gi|87242478|gb|ABD33778.1| flagellin [Bacillus thuringiensis]
Length = 329
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + +
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + +++Q E +L+ Q+ IA + FN + L+ D
Sbjct: 61 NSVSNILLRMRDIANQSANGTNTTDNQQALQKEFGKLKEQISYIADNTEFNDKTLLKADN 120
Query: 139 GSSTASIAKSVIGSFIRDD 157
S+ + I D
Sbjct: 121 SVKIQSLDSADTNKQISID 139
Score = 67.1 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 17/162 (10%), Positives = 43/162 (26%)
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
+ + + + N V+ + +
Sbjct: 168 AEETMGRLANGAQNADADTLALDVNNAKEAFDKIKGFITDKNKVQDVENAFNSFTAANAA 227
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
K + T V ID +K + +G+ +R+
Sbjct: 228 GKSTAAEGINTAFTTAVTGLTAGTTNTSNPSSAVDAIDAALKTVASNRATLGATLNRLDF 287
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +K ++ ++ DADMA E + ++ + + +
Sbjct: 288 NVNNLKSQSASMASAASQIEDADMAKEMSEMTKFKILNEAGI 329
>gi|218682032|ref|ZP_03529633.1| putative flagellin protein [Rhizobium etli CIAT 894]
Length = 315
Score = 98.3 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 84/146 (57%), Positives = 104/146 (71%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN++AM+A Q LR +N L+ Q RVSSG RV AADNAAYWSIA M+SDN AL
Sbjct: 5 MTSILTNNAAMAALQTLRGVNDGLKDTQGRVSSGYRVEKAADNAAYWSIATTMRSDNQAL 64
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A + M AIDV+S IK KI A E+G D IQ E+ QLQ QL
Sbjct: 65 SAVSDALGLGAAKVDTAYSAMDSAIDVVSDIKAKIVAATEKGVDKTKIQQELDQLQEQLL 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA+ +SF+GENW+ G+ + +
Sbjct: 125 SIAQSASFSGENWVAGASGTKSVVSS 150
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/136 (38%), Positives = 78/136 (57%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
T + S + V + + + + ++ ++ ++ +
Sbjct: 179 GMTSTGAIETTSGIIGTAFNGTYGGTVIVMASIYDLDITGFTQGQLDGALTGVELVLGAM 238
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
TAA +GSIS+RI LQE+F+ + D+++ GVGRLVDADM ES++LSALQTQQQLAVQ+
Sbjct: 239 TAAGSALGSISTRIQLQENFVSGLHDSIDSGVGRLVDADMEEESSKLSALQTQQQLAVQS 298
Query: 436 LSIVNNSTARILSLFR 451
LSI N+S IL+LFR
Sbjct: 299 LSIANSSAQNILTLFR 314
>gi|121596125|ref|YP_988021.1| flagellar hook-associated protein 3 [Acidovorax sp. JS42]
gi|120608205|gb|ABM43945.1| flagellar hook-associated protein 3 [Acidovorax sp. JS42]
Length = 420
Score = 98.3 bits (242), Expect = 3e-18, Method: Composition-based stats.
Identities = 52/457 (11%), Positives = 124/457 (27%), Gaps = 48/457 (10%)
Query: 1 MTS----ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSD 56
M+S + T + + + L L +Q+ +++G RV +D+ + A+ +
Sbjct: 1 MSSSFYRVSTANMYDATLRNLSARQKTLVDLQENLTAGKRVVRPSDDPVAAAQAERALTR 60
Query: 57 NGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEIT 113
+ A+ + + + A++ + A+ ++ I+ + A D K+ ++I
Sbjct: 61 ISRIQTEQRALDVQRNAIAQAESTLGDAVGLVQEIRQLVVAAGGGALKPEDRKTYANQIQ 120
Query: 114 QLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE 173
L+ QL + NG L + + Q + +
Sbjct: 121 SLREQLTQVINRKDTNGVPLLGALGSALEPFTGPLLNNPDYLFAGLPGQAASSGAAIPTT 180
Query: 174 TVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233
+ R G+ ++ + + + + T + +
Sbjct: 181 VDGHAALMFDPVRDGVYTATVTRGAGSSLVTSAITTSNREALDGAQYALAVDTVTVDPVA 240
Query: 234 AANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATT 293
A + +G + + +
Sbjct: 241 GTTVVDYTLTKTAKDGTVTTSNVTTAPVKTGQPIPITINEGPDTVMSFSLTGTPAAGDSV 300
Query: 294 KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD 353
+S ++ + TD
Sbjct: 301 ALQPSSSLM------------------------------------GTIDSAIRGITDATD 324
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ A+ + +S ID ++ G G + +R +E R D
Sbjct: 325 SVAASQAVGQALSNIDAGMERLHNMRGYAGELLNRADRITGDQDKRSIQLEADRSRAEDL 384
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
DM + + A+++ + V + LSLF
Sbjct: 385 DMVQGISDFQNASVGYEAALKSYAQV-----QRLSLF 416
>gi|296134283|ref|YP_003641530.1| flagellar hook-associated protein 3 [Thermincola sp. JR]
gi|296032861|gb|ADG83629.1| flagellar hook-associated protein 3 [Thermincola potens JR]
Length = 292
Score = 98.3 bits (242), Expect = 3e-18, Method: Composition-based stats.
Identities = 16/174 (9%), Positives = 59/174 (33%), Gaps = 3/174 (1%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
L + + +Q+++S+G +++ +D+ + +++ + + +
Sbjct: 13 LSNLNNNYRIMNKIQEQLSTGKKINRPSDDPVGVVSSLRLRAGLTETEKYLNNVDDARAW 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNG 130
+D + +A D++ + G ++ EI Q++ Q+ +A +
Sbjct: 73 LDTTDTALGQASDLLQRARELTIYGANDALAQQSRDALAQEIHQIRDQMIQVANTTHDGR 132
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + + A + G ++ + + +++
Sbjct: 133 YIFGGFKTSNQPFTAAGAYTGDNGSIAYEIGVNVSMQVNIPGDAAFINAQDVFQ 186
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 17/148 (11%), Positives = 43/148 (29%)
Query: 278 TYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
+ ++ P + Y + ++ +
Sbjct: 121 MIQVANTTHDGRYIFGGFKTSNQPFTAAGAYTGDNGSIAYEIGVNVSMQVNIPGDAAFIN 180
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
+ L A+ A N V +DT I + ++G+ ++R+ L + +
Sbjct: 181 AQDVFQLLADIEADLTAGNTASLSNVRVGELDTAIDNILSLRSEVGAKTNRLDLTKSRLD 240
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSAL 425
+ + + + D + A T+L
Sbjct: 241 EANLNLSELLSKNEDINTAEVITQLKMQ 268
>gi|240143835|ref|ZP_04742436.1| flagellin [Roseburia intestinalis L1-82]
gi|257204181|gb|EEV02466.1| flagellin [Roseburia intestinalis L1-82]
Length = 275
Score = 98.3 bits (242), Expect = 3e-18, Method: Composition-based stats.
Identities = 41/268 (15%), Positives = 91/268 (33%), Gaps = 3/268 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+ N + + S++LR N+E ++++G ++ A D+AA I++ M+ L+
Sbjct: 2 VVNHNMALICESRQLRCNVKNMEKSSKKLATGYKLLGANDDAAGLQISETMRHQTRGLNK 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQL 119
S G S + A A + + +V+ + + T D ++IQ EI QL ++
Sbjct: 62 ASRNSQDGISMLQTADAALQETQEVLDRMTDLTTQAANDINTDADRRAIQDEIDQLNQEV 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA ++FN + L + GS + L + V + S
Sbjct: 122 DRIAYTTNFNQQYILADGTPQARPGYYMIQTGSLAGQGIEIKFVNASKESLGVDKVDVSS 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
TE ++ + + + + + + + + + N
Sbjct: 182 HAKATESIAVVQNAIEKAASFRDTFGAQQERLEHALRGTDNTSESTQRAESSRRDTNMNM 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSG 267
+ + + +
Sbjct: 242 EMVQYSTNRILVQASQSILAQYNDDAKY 269
Score = 68.2 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/236 (8%), Positives = 59/236 (25%)
Query: 216 TISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAA 275
+++ T + N ++ ++ AA + A
Sbjct: 40 NDDAAGLQISETMRHQTRGLNKASRNSQDGISMLQTADAALQETQEVLDRMTDLTTQAAN 99
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
+ + TN + + L +
Sbjct: 100 DINTDADRRAIQDEIDQLNQEVDRIAYTTNFNQQYILADGTPQARPGYYMIQTGSLAGQG 159
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
+ + + + E ++ + I+ A + G+ R+
Sbjct: 160 IEIKFVNASKESLGVDKVDVSSHAKATESIAVVQNAIEKAASFRDTFGAQQERLEHALRG 219
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ ++ D +M E + S + Q + L+ N+ +L + +
Sbjct: 220 TDNTSESTQRAESSRRDTNMNMEMVQYSTNRILVQASQSILAQYNDDAKYVLEMLK 275
>gi|46906941|ref|YP_013330.1| flagellin [Listeria monocytogenes serotype 4b str. F2365]
gi|47091652|ref|ZP_00229448.1| flagellin [Listeria monocytogenes str. 4b H7858]
gi|116872079|ref|YP_848860.1| flagellin [Listeria welshimeri serovar 6b str. SLCC5334]
gi|217965212|ref|YP_002350890.1| flagellin [Listeria monocytogenes HCC23]
gi|226223321|ref|YP_002757428.1| flagellin protein [Listeria monocytogenes Clip81459]
gi|254824030|ref|ZP_05229031.1| flagellin [Listeria monocytogenes FSL J1-194]
gi|254853106|ref|ZP_05242454.1| flagellin [Listeria monocytogenes FSL R2-503]
gi|254932030|ref|ZP_05265389.1| flagellin [Listeria monocytogenes HPB2262]
gi|255522421|ref|ZP_05389658.1| flagellin [Listeria monocytogenes FSL J1-175]
gi|289433968|ref|YP_003463840.1| flagellin [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|290893986|ref|ZP_06556961.1| flagellin [Listeria monocytogenes FSL J2-071]
gi|300764502|ref|ZP_07074495.1| flagellin [Listeria monocytogenes FSL N1-017]
gi|44098|emb|CAA46578.1| flagellin [Listeria monocytogenes]
gi|46880207|gb|AAT03507.1| flagellin [Listeria monocytogenes serotype 4b str. F2365]
gi|47019971|gb|EAL10708.1| flagellin [Listeria monocytogenes str. 4b H7858]
gi|53854952|gb|AAU95796.1| flagellin [Listeria monocytogenes]
gi|54306646|gb|AAV33477.1| flagellin [Listeria monocytogenes]
gi|116740957|emb|CAK20077.1| flagellin protein [Listeria welshimeri serovar 6b str. SLCC5334]
gi|159153832|gb|ABW93424.1| flagellin [Listeria monocytogenes]
gi|159153834|gb|ABW93425.1| flagellin [Listeria monocytogenes]
gi|159153840|gb|ABW93428.1| flagellin [Listeria monocytogenes]
gi|209512837|gb|ACI49721.1| FlaA [Listeria monocytogenes]
gi|209512839|gb|ACI49722.1| FlaA [Listeria monocytogenes]
gi|217334482|gb|ACK40276.1| flagellin [Listeria monocytogenes HCC23]
gi|225875783|emb|CAS04486.1| flagellin protein [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|258606455|gb|EEW19063.1| flagellin [Listeria monocytogenes FSL R2-503]
gi|289170212|emb|CBH26752.1| flagellin [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|290556432|gb|EFD89971.1| flagellin [Listeria monocytogenes FSL J2-071]
gi|293583582|gb|EFF95614.1| flagellin [Listeria monocytogenes HPB2262]
gi|293593258|gb|EFG01019.1| flagellin [Listeria monocytogenes FSL J1-194]
gi|300514856|gb|EFK41910.1| flagellin [Listeria monocytogenes FSL N1-017]
gi|307570229|emb|CAR83408.1| flagellin protein [Listeria monocytogenes L99]
gi|313634385|gb|EFS00977.1| flagellin [Listeria seeligeri FSL N1-067]
gi|313639066|gb|EFS04052.1| flagellin [Listeria seeligeri FSL S4-171]
gi|328467258|gb|EGF38338.1| flagellin [Listeria monocytogenes 1816]
gi|328475653|gb|EGF46402.1| flagellin [Listeria monocytogenes 220]
gi|332311115|gb|EGJ24210.1| Flagellin [Listeria monocytogenes str. Scott A]
Length = 287
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 60/146 (41%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN ++ + LR N + Q+R++SG R++ + D+AA ++ M + L A
Sbjct: 3 VNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S +G + A + +S ++ ++ D K +E L +L
Sbjct: 63 SKNSSMGIDLLQTADSALSSMSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKELD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
+A +++N L + ++
Sbjct: 123 HVADTTNYNNIKLLDQTATGAATQVS 148
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 38/96 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +E ID I + +G+ SR+ + A + + DAD
Sbjct: 190 VADADSSQEATEAIDELINNISNGRALLGAGMSRLSYNVSNVNNQSIATKASASSIEDAD 249
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA+E + ++ + Q ++ LS N + + L
Sbjct: 250 MAAEMSEMTKYKILTQTSISMLSQANQTPQMLTQLI 285
>gi|157101678|gb|ABV23547.1| flagellin C [Bacillus thuringiensis serovar alesti]
Length = 282
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/246 (15%), Positives = 86/246 (34%), Gaps = 3/246 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 68 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAREID 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++FNG +L T ++ + + ITT T +
Sbjct: 128 HIADKTNFNGNAFLSGGGKDITIQLSDASNDTMKITAIDTKAITTATLATPTATGADKAL 187
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + I+ + ++ + + + + +A
Sbjct: 188 NAASAPAQITALDTAIQEIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDADMA 247
Query: 241 QAKGIA 246
+
Sbjct: 248 KEMSNM 253
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 45/130 (34%)
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
S + + + TL D + ++ +DT I+ A
Sbjct: 153 SDASNDTMKITAIDTKAITTATLATPTATGADKALNAASAPAQITALDTAIQEIADARAT 212
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
GS +R+ + + + ++ DADMA E + ++ + + + LS N
Sbjct: 213 FGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKILNEAGISMLSQANQ 272
Query: 442 STARILSLFR 451
+ + L +
Sbjct: 273 TPQMVSKLLQ 282
>gi|153938272|ref|YP_001391993.1| flagellin [Clostridium botulinum F str. Langeland]
gi|168180881|ref|ZP_02615545.1| flagellin [Clostridium botulinum NCTC 2916]
gi|152934168|gb|ABS39666.1| flagellin [Clostridium botulinum F str. Langeland]
gi|182668295|gb|EDT80274.1| flagellin [Clostridium botulinum NCTC 2916]
gi|295320007|gb|ADG00385.1| flagellin [Clostridium botulinum F str. 230613]
Length = 272
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 71/201 (35%), Gaps = 4/201 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + + + ++ + E V ++VSSG R++ A+D+A+ +I++ K+ LS
Sbjct: 3 IN-NANVLGSFNRITKQKFKNESVVEKVSSGKRINRASDDASGIAISESFKAQVRGLSQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
G S + A + + +K D K E +L++ +
Sbjct: 62 GRNTQDGISMLQTVDAALDDISKHLYRMKEIAVKAANDTLTDEDRKLAHEEFKELKNSID 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I+ + FN L+ D + + ++ + I ++
Sbjct: 122 EISDKTEFNKIKLLKEDKDLNIQIKDNPYVTYTVKLQAVNTERMDIKDSTVDTFQDASNA 181
Query: 181 TDGTERYGLLDRNHKIKVEPQ 201
++ +++
Sbjct: 182 ISSIDKALNELIKYRVNTGND 202
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 28/92 (30%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +S ID + G+ + + + + + R+ D+D
Sbjct: 172 VDTFQDASNAISSIDKALNELIKYRVNTGNDYNNLCQAFNDSSNSELNLTASLSRVEDSD 231
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARI 446
MAS L + L V +T I
Sbjct: 232 MASSMMNLIKGNVLSEYNKSMLVAVRETTQGI 263
>gi|163939569|ref|YP_001644453.1| flagellin domain-containing protein [Bacillus weihenstephanensis
KBAB4]
gi|163861766|gb|ABY42825.1| flagellin domain protein [Bacillus weihenstephanensis KBAB4]
Length = 281
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 73/211 (34%), Gaps = 3/211 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 3 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 63 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMNKEYQALAQEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++FNG +L + S + I S+
Sbjct: 123 HIADKTNFNGNAFLGGTGAGGKDITIQLSDASSDTMTIAAIDTKDITTTKLAVGADPASA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
T + Q + D +
Sbjct: 183 TKNLNATTAATEITALDTAIQNIADARATFG 213
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/281 (11%), Positives = 73/281 (25%)
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
++S D+ + K I+ + DA+G + +
Sbjct: 1 MRINTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLN 60
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVR 290
A + + T S + + +
Sbjct: 61 VGARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMNKEYQALAQE 120
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
T+ G G + + D+ + + A
Sbjct: 121 IDHIADKTNFNGNAFLGGTGAGGKDITIQLSDASSDTMTIAAIDTKDITTTKLAVGADPA 180
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ ++ +DT I+ A GS +R+ + + + ++
Sbjct: 181 SATKNLNATTAATEITALDTAIQNIADARATFGSQLNRLDHNLNNVTSQATNMAASASQI 240
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DADMA E + ++ + + + LS N + + L +
Sbjct: 241 EDADMAKEMSNMTKFKILNEAGISMLSQANQTPQMVSKLLQ 281
>gi|222084874|ref|YP_002543403.1| flagellin C protein [Agrobacterium radiobacter K84]
gi|221722322|gb|ACM25478.1| flagellin C protein [Agrobacterium radiobacter K84]
Length = 301
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 86/228 (37%), Positives = 124/228 (54%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN++A +A Q LR IN NLE Q+ VSSGLR+S A+DNAAYWSIA MKSD+ A+
Sbjct: 1 MTSILTNNAATAALQTLRGINSNLESTQNAVSSGLRISKASDNAAYWSIATSMKSDDSAI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AVSDA+GLG++KVD A ++ A+D++S IK+K+ +E D S+Q EI QLQ+QL+
Sbjct: 61 GAVSDALGLGAAKVDTATTAVTSALDIVSQIKSKLVTAMEDSVDKSSVQEEIGQLQAQLK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A+ +SFNGENW+ G S + ++ + G+ +S
Sbjct: 121 SVAQSASFNGENWVMAASGDSASVVSSFIRGTNGTVSVSTTSYAFDSGATGNVLFGANSG 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
T T L V + + ++ + T+
Sbjct: 181 TIDTASGILGTVTGSYSVFSLDITGMTGGQISSALDMVQTALNSMTSM 228
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 51/141 (36%), Positives = 73/141 (51%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
T + + VT + + + + + + T
Sbjct: 161 TSYAFDSGATGNVLFGANSGTIDTASGILGTVTGSYSVFSLDITGMTGGQISSALDMVQT 220
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ T+ ++GSIS+RI LQ F + D++E GVG+LVDADM ES++LSALQTQQQ
Sbjct: 221 ALNSMTSMGSRLGSISTRIDLQTSFASSLSDSIESGVGKLVDADMEEESSKLSALQTQQQ 280
Query: 431 LAVQALSIVNNSTARILSLFR 451
LAVQ+LSI N+S+ ILSLFR
Sbjct: 281 LAVQSLSIANSSSQSILSLFR 301
>gi|229144372|ref|ZP_04272778.1| Flagellin [Bacillus cereus BDRD-ST24]
gi|228639159|gb|EEK95583.1| Flagellin [Bacillus cereus BDRD-ST24]
Length = 223
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 35/92 (38%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
E + +D I+ GS +R+ + + + ++ DADMA E
Sbjct: 132 DAAESIKELDKAIQSVADMRATFGSQLNRLDHNLNNVNSQATNMAASASQIEDADMAKEM 191
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ + + + LS N + + L +
Sbjct: 192 SNMTKFKILNEAGISMLSQANQTPQMVSKLLQ 223
Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 41/113 (36%), Gaps = 3/113 (2%)
Query: 53 MKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQ 109
M++ G L+ + S + + ++ +++ +++ T G D S+
Sbjct: 1 MRAKEGGLNVGARNTQDAMSALRTTDSALNSISNILLRMRDLATQSANGTNDGKDQDSLN 60
Query: 110 SEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
E +LQ ++ IA ++FNG++ L ++
Sbjct: 61 LEFKELQGEIDHIAGKTNFNGKSLLAAKGTDIDIQLSDISGDKLTIASVDATT 113
>gi|319427082|gb|ADV55156.1| flagellar hook-associated protein 3 [Shewanella putrefaciens 200]
Length = 403
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/436 (10%), Positives = 111/436 (25%), Gaps = 53/436 (12%)
Query: 8 HSAMSASQKLRDI---NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
SA +Q + + + +++SSG +V+ A D+ + N +
Sbjct: 4 SSAQIFNQSITSVLQKQTATSKILEQLSSGKKVNTAGDDPVAALGIDNLNQRNALVDQFM 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
I ++++ + ++ + A ++ S+I+ ++ V ++ + I E+ +L
Sbjct: 64 KNIDYATNRLAVTESKLGSAENLTSSIREQVVRAVNGTLADSERQMIADEMKGSLEELLS 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA +G + I I ++ + +
Sbjct: 124 IANSKDESGNYMFSGYSTDKEPFAFDNSIPPKIVYSGDSGIRNSLVQSGVALGTNVPGDS 183
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ L + Q + + A + L N
Sbjct: 184 AFMKAPNGLGDYSVNYLASQQGEFSVKTAKIADASTYLADTYTFNFIDNGLGGTNLQVLD 243
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ V A +
Sbjct: 244 SANNPVANVTNFDATTPVSFNG-------------------------------------- 265
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ + + I S I + + + +
Sbjct: 266 ---------IEVKVSGKPSAGDSFTMEPQAEVSIFDTISSAIALIEDPNSANTPQGRAQL 316
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++++ ID+ + ++A G+ + ++ + + RL D D AS T
Sbjct: 317 AQILNNIDSGVNQISSARSVAGNNLKAVESYKETHTEEKVVNTSALSRLEDLDYASAITE 376
Query: 422 LSALQTQQQLAVQALS 437
Q S
Sbjct: 377 FEKQQLALNAVSSVFS 392
>gi|157101669|gb|ABV23540.1| flagellin C [Bacillus thuringiensis serovar alesti]
Length = 282
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/227 (16%), Positives = 80/227 (35%), Gaps = 3/227 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 68 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEID 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++FNG +L T ++ + + ITT T +
Sbjct: 128 HIADKTNFNGNAFLSGGGKDITIQLSDASNDTMKITAIDTKAITTATLATPTATGADKAL 187
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+ + + I+ + ++ +
Sbjct: 188 NAASAPAQITALDTAIQEIADARATFGSQLNRLDHNLNNVTSQATNM 234
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 45/130 (34%)
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
S + + + TL D + ++ +DT I+ A
Sbjct: 153 SDASNDTMKITAIDTKAITTATLATPTATGADKALNAASAPAQITALDTAIQEIADARAT 212
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
GS +R+ + + + ++ DADMA E + ++ + + + LS N
Sbjct: 213 FGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKILNEAGISMLSQANQ 272
Query: 442 STARILSLFR 451
+ + L +
Sbjct: 273 TPQMVSKLLQ 282
>gi|115522807|ref|YP_779718.1| flagellin domain-containing protein [Rhodopseudomonas palustris
BisA53]
gi|115516754|gb|ABJ04738.1| flagellin domain protein [Rhodopseudomonas palustris BisA53]
Length = 276
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +A +A + L + ++SSG +++ A+D+AA +I+ + SD L
Sbjct: 1 MPVISTNTAANTAVRYLNVNSAQESSSLAKLSSGSKINKASDDAAGLAISTRISSDITTL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
S SS + A G S D+++ +K+ T + I SE QL +
Sbjct: 61 QQASTNASQASSILQTADGGASNISDILARMKSLATQAASGTVTASSRTYIDSEFKQLIA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAK 147
Q+ IA G+ ++ E+ L + S +K
Sbjct: 121 QIDSIASGTRYSNESLLDGTSSNFAGSGSK 150
Score = 66.3 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 35/78 (44%)
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A IG++ SR + D I + ++ + D D+ASE +LS+ + Q A
Sbjct: 198 NTVSKARADIGALESRFNFSSDSISTQIENLDAAKSAITDVDIASEQAKLSSAEVLVQAA 257
Query: 433 VQALSIVNNSTARILSLF 450
V A S N +L L
Sbjct: 258 VSAESAANQMPQYLLKLL 275
>gi|224825746|ref|ZP_03698850.1| flagellin domain protein [Lutiella nitroferrum 2002]
gi|224601970|gb|EEG08149.1| flagellin domain protein [Lutiella nitroferrum 2002]
Length = 276
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 69/218 (31%), Gaps = 3/218 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN +A+ L L R+ +G R++ A D+AA IA + + + +
Sbjct: 1 MLSLQTNAAALFTKSNLNASQSALTTAMTRLGTGFRINSAMDDAAGLQIATRLDAQSRGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQS 117
+ G S + A + + ++M +K+ T D + Q+E QL +
Sbjct: 61 TVAMKNAQNGISMLQTADGALGEVSNIMLRMKDLATEAANGTASAADQTAAQAEFAQLGN 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L +I + F G L + + +
Sbjct: 121 ELTNIMSNTKFGGTALLAGGKLGTGPVTFQIGSSASETYAFDASTQMGTFATSMAALQAG 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASG 215
D +T L + + + D
Sbjct: 181 DLTTGANAAITLAETALNDLGTVRSAIGAGANRLDHVY 218
Score = 64.0 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/275 (12%), Positives = 74/275 (26%)
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
L T+ + + N + + S ++AT A +
Sbjct: 2 LSLQTNAAALFTKSNLNASQSALTTAMTRLGTGFRINSAMDDAAGLQIATRLDAQSRGMT 61
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
A+ ++ A + + A + A N
Sbjct: 62 VAMKNAQNGISMLQTADGALGEVSNIMLRMKDLATEAANGTASAADQTAAQAEFAQLGNE 121
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+T+ T + T + + T A A +
Sbjct: 122 LTNIMSNTKFGGTALLAGGKLGTGPVTFQIGSSASETYAFDASTQMGTFATSMAALQAGD 181
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ +T + IG+ ++R+ + + + + + GR++D D A
Sbjct: 182 LTTGANAAITLAETALNDLGTVRSAIGAGANRLDHVYNNLSNVNNNTQIAKGRIMDTDYA 241
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+E+ ++ Q Q L +SL +
Sbjct: 242 AETASMTTKQMLMQAGTGMLKQSGTIGQLAMSLMQ 276
>gi|148358813|ref|YP_001250020.1| flagellar hook associated protein type 3 FlgL [Legionella
pneumophila str. Corby]
gi|296106858|ref|YP_003618558.1| flagellar hook-associated protein 3 FlgL [Legionella pneumophila
2300/99 Alcoy]
gi|148280586|gb|ABQ54674.1| flagellar hook associated protein type 3 FlgL [Legionella
pneumophila str. Corby]
gi|295648759|gb|ADG24606.1| flagellar hook-associated protein 3 FlgL [Legionella pneumophila
2300/99 Alcoy]
Length = 411
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 49/430 (11%), Positives = 128/430 (29%), Gaps = 36/430 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN L L +QD+ +SG+RV +D+ + +++K + +
Sbjct: 3 ISTNQIYQRGLDNLLTQQERLSRLQDQQASGIRVRTPSDDPVASAQIELIKQRISNIELL 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ S + + + +S ++ + ++ + ++ + Q+ L +
Sbjct: 63 QNNRQAADSALRLEEGILSNTVNSLHRLREIQIQSGNPSLSEEDRKTLAVEAQALLNQLL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N GS + + S+ S NG + D+ +
Sbjct: 123 DYANTKDSNGSYMFSGSKSLTQPVSLNLSGQYVYNGDNTQRFQAVTTSLLVAVNDTGDNV 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
R + I+
Sbjct: 183 FMRIPSGNGRFAIRETVT------------------------------------PNTGTA 206
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+++ V AA N T + + ++ + GN + +
Sbjct: 207 SVSSGSVINEAAFVPDNYTMTFALNSQGNLVVMVSGTLSGNVIPPSGLPDDAPLYQEGSA 266
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ ++ + +S ++ K+ + LN ++ + + +
Sbjct: 267 ISFNGMEMVVSGLPKAGDSFSISPAKNESIFSTVQRMINNLNKPYVSSVEKAATQTENNQ 326
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+++ ID+ + + +G+ +++ E D + +L + D + +T L+
Sbjct: 327 LLAQIDSALGHILSVQSDLGARLNQLETAEKANNDYLDISAATLKKLREIDPVAVATELN 386
Query: 424 ALQTQQQLAV 433
Q A
Sbjct: 387 LQLVNLQAAQ 396
>gi|306516605|gb|ADM96191.1| FlaA [Campylobacter coli]
Length = 206
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 78/205 (38%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + L+ R+SSGLR++ AAD+A+ +IA +++ L
Sbjct: 2 INTNGAALNAKANSDLNSKALDQSLARLSSGLRINSAADDASGMAIADSLRTQASTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ +S + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 INNGNDAASILQTADKAMDEQLKILDTIKVKATQAAQDGQSAKTRAMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I + + + SS
Sbjct: 122 NIANTTSFNGKQLLSGGFINQEFQIGAQSNQTIKASIGATQSSKIGVTRFETGANVTSSS 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ +
Sbjct: 182 IASMTIKNYNGIDDFKIQNVVISTS 206
>gi|157101673|gb|ABV23543.1| flagellin C [Bacillus thuringiensis serovar alesti]
Length = 282
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/248 (16%), Positives = 87/248 (35%), Gaps = 3/248 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 6 TRINTNINSMRTQEYMRQNQDKVNTSTNRLSSGKSINSAADDAAGLAIATRMRAKEGGLN 65
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
+ S + A + +++ +++ T D S+ E L +
Sbjct: 66 VGARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQE 125
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IA ++FNG +L T ++ + + ITT T
Sbjct: 126 IDHIADKTNFNGNAFLSGGGKDITIQLSDASNDTMKITAIDTKAITTATLATPTATGADK 185
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + + + I+ + ++ + + + + +A
Sbjct: 186 ALNAASAPAQITALDTAIQEIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDAD 245
Query: 239 FDQAKGIA 246
+
Sbjct: 246 MAKEMSNM 253
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 46/130 (35%)
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
S + + + TL D + ++ +DT I+ A
Sbjct: 153 SDASNDTMKITAIDTKAITTATLATPTATGADKALNAASAPAQITALDTAIQEIADARAT 212
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
GS +R+ + + + ++ DADMA E + ++ + + + LS N
Sbjct: 213 FGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKILNEAGISMLSQANQ 272
Query: 442 STARILSLFR 451
+ ++ L +
Sbjct: 273 TPQKVSKLLQ 282
>gi|53854948|gb|AAU95794.1| flagellin [Listeria monocytogenes]
Length = 287
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 60/146 (41%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN ++ + LR N + Q+R++SG R++ + D+AA ++ M + L A
Sbjct: 3 VNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S +G + A + +S ++ ++ D K +E L +L
Sbjct: 63 SKNSSMGIDLLQTADSALSSMSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKELD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
+A +++N L + ++
Sbjct: 123 HVADTTNYNNIKLLDQTATGAATQVS 148
Score = 79.8 bits (194), Expect = 8e-13, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 38/96 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ++ ID I + +G+ SR+ + A + + DAD
Sbjct: 190 VADADSSQQATEAIDELINNISNGRALLGAGMSRLSYNVSNVNNQSIATKASASSIEDAD 249
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA+E + ++ + Q ++ LS N + + L
Sbjct: 250 MAAEMSEMTKYKIPTQTSISMLSQANQTPQMLTQLI 285
>gi|218886715|ref|YP_002436036.1| flagellar hook-associated protein 3 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757669|gb|ACL08568.1| flagellar hook-associated protein 3 [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 497
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/497 (11%), Positives = 118/497 (23%), Gaps = 55/497 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN + ++ + + + N+ + ++++ R++ +D+ +A + L+
Sbjct: 3 ISTNMTYSNSLKYMTRLQSNINRLTIQMATQQRINCPSDDPYGTEVALTNSTLINQLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ + +A + A ++++ + +I E L QL
Sbjct: 63 QSNVDTAKGWLSLADDTLGDASTALASLIELAEQAATGTLTDANRLAIAEEARGLYEQLV 122
Query: 121 DIARGSSFNGENWLRTDLG------------------------------------SSTAS 144
A + D G +
Sbjct: 123 TCASTRYNGQSIFAGRDSGGTAYSLGLGATVSGAALASGAGSAVLSVEGEADPSLRIEFT 182
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+V I T S + +
Sbjct: 183 GGGTVGTDDITCRYSSDGGDTWTEATLAAGETTLSCDGVQVHMQDGTGVTAVSDDDTGAG 242
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAW-----------LKAANATFDQAKGIATIPVPLP 253
A T T D +
Sbjct: 243 TRITVRPAAIYTGDADDGAQVTARSNTDVTATPTGTFSNSVVVRIEDDTTVTGPVAYSYS 302
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+ +S + + +V + G+ T + T
Sbjct: 303 TDGGLNWSDVQSSDNGTLTVPGGTLTLAAGSGSDLAAGDTFTVTSDSTALTVRVSTSTSI 362
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ D +G + + + N+ + E + I
Sbjct: 363 AINNCGLDVFGGLYSADGTSYAGTGDDDLFEAVGQFIGYLETNDAEGIAESLKAITAGQA 422
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+AA IG+ R+ + L+ + V +VDAD +T+LS L T + +
Sbjct: 423 KMLSAASNIGAREVRLEHIQTANTLLASTAKNAVSNVVDADTTELATQLSKLTTVYEAVL 482
Query: 434 QALSIVNNSTARILSLF 450
S LSL
Sbjct: 483 S-----TQSAVMKLSLL 494
>gi|306516575|gb|ADM96176.1| FlaA [Campylobacter coli]
Length = 206
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 79/204 (38%), Gaps = 3/204 (1%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN +A++A + L+ R+SSGLR++ AAD+A+ +IA +++ L
Sbjct: 3 NTNGAALNAKANSDLNSKALDQSLARLSSGLRINSAADDASGMAIADSLRTQASTLGQAI 62
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ +S + A M + + ++ TIK K T + G +Q++I +L +L +
Sbjct: 63 NNGNDAASILQTADKAMDEQLKILDTIKVKATQAAQDGQSAKTRNMLQADINRLMEELDN 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA +SFNG+ L + I + + T ++ S
Sbjct: 123 IANTTSFNGKQLLSGGFINQEFQIGAQSNQTIKASIGATQSSKIGVTRFETGTNVVQSGI 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKD 205
+ + +
Sbjct: 183 ASLTIKNYNGIDDFKFQDVVISTS 206
>gi|194434952|ref|ZP_03067195.1| flagellin [Shigella dysenteriae 1012]
gi|194416787|gb|EDX32913.1| flagellin [Shigella dysenteriae 1012]
gi|332095512|gb|EGJ00528.1| flagellin domain protein [Shigella dysenteriae 155-74]
Length = 119
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 40/97 (41%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + + +D I +G++ +R+ + + + R+ DAD
Sbjct: 23 TKAATTADPLKALDEAISSIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADY 82
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
A+E + +S Q QQ L+ N ++LSL +G
Sbjct: 83 ATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG 119
>gi|89895773|ref|YP_519260.1| hypothetical protein DSY3027 [Desulfitobacterium hafniense Y51]
gi|89335221|dbj|BAE84816.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 329
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 27/212 (12%), Positives = 66/212 (31%), Gaps = 4/212 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + + L ++ +Q+++S+G +++ +D+ + KS+ L+ +
Sbjct: 3 ISNNMLSRNLLLNLWAAQGRIDKLQNQLSTGQKINRPSDDPVGTENSLRFKSNISYLNQL 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG----TDSKSIQSEITQLQSQL 119
G + +D M + ++ K + D K I EI Q++ +
Sbjct: 63 KANAKEGIAYMDTTDDTMGEMTSMIQRAKELAIRAMNTSTVNDEDRKKIAIEIDQIREHV 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++A + + T A GS +I+ ++ +
Sbjct: 123 IELANTKVGSKYIFGGTANVEPFPKGATEWQGSDDTKKFQVGGDLSIEVSVNGHDLFGAG 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ + I +
Sbjct: 183 WEYAEVTIPAPTDPPTYEYKKGSGSGIAMFDT 214
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/313 (6%), Positives = 74/313 (23%)
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ + L ++ + + + + + L ++ + +
Sbjct: 3 ISNNMLSRNLLLNLWAAQGRIDKLQNQLSTGQKINRPSDDPVGTENSLRFKSNISYLNQL 62
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + + + + + +
Sbjct: 63 KANAKEGIAYMDTTDDTMGEMTSMIQRAKELAIRAMNTSTVNDEDRKKIAIEIDQIREHV 122
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
+A V + + T D+ + + G
Sbjct: 123 IELANTKVGSKYIFGGTANVEPFPKGATEWQGSDDTKKFQVGGDLSIEVSVNGHDLFGAG 182
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
+ + V T S + + + + + E+ ++
Sbjct: 183 WEYAEVTIPAPTDPPTYEYKKGSGSGIAMFDTLAQLSKALNESNINGVDDGTGTEEDGVQ 242
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
++S ++ Q + ++G+ +R+ + + + ++ AD+A
Sbjct: 243 VLLSKLELQADHISDVRAQLGARQNRMDSVYTQLDSTSANLGDSLSTVLYADIAETLVNF 302
Query: 423 SALQTQQQLAVQA 435
+ Q A+
Sbjct: 303 KTQDSIYQAALSV 315
>gi|218509946|ref|ZP_03507824.1| flagellin C protein [Rhizobium etli Brasil 5]
Length = 261
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 51/96 (53%), Positives = 73/96 (76%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ ++ I++ + T+A ++GSIS+RI LQEDF+ + D+++ GVGRLVDADM
Sbjct: 166 TTGQIQSALTTIESALSAMTSAGAQLGSISTRIDLQEDFVGALSDSIDSGVGRLVDADME 225
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
ES++LSALQTQQQLA+Q+LSI N+S+ ILSLFRG
Sbjct: 226 EESSKLSALQTQQQLAIQSLSIANSSSQNILSLFRG 261
Score = 62.8 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 57/105 (54%), Positives = 72/105 (68%)
Query: 42 DNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER 101
DNAAYWSIA M+SDN ALSAVSDA+GLG++KVD A M AIDV+ IK K+ A E
Sbjct: 1 DNAAYWSIATTMRSDNKALSAVSDALGLGAAKVDTAYTAMDSAIDVVDEIKAKLVAATED 60
Query: 102 GTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
G D +Q EI+QLQ QL IA+ +SF+GENW+ G+ + +
Sbjct: 61 GVDKSKVQEEISQLQEQLMSIAQSASFSGENWVAGADGTKSVVSS 105
>gi|312274368|gb|ADQ57424.1| flagellin [Borrelia persica]
gi|312274370|gb|ADQ57425.1| flagellin [Borrelia persica]
Length = 224
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++AS+ NL Q+++SSG R++ A+D+AA +A + + LS S
Sbjct: 1 INASRNNAINVANLSKTQEKLSSGYRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKA 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSS 127
+ + + +++ V+ +K D SIQ EI QL ++ IA +
Sbjct: 61 INFIQTTEGNLNEVEQVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQ 120
Query: 128 FNGENWLRTDLGSSTASIAK 147
+N L + A+
Sbjct: 121 YNQMRMLSNKSAADNVKTAE 140
>gi|260768764|ref|ZP_05877698.1| flagellin protein flaA [Vibrio furnissii CIP 102972]
gi|260616794|gb|EEX41979.1| flagellin protein flaA [Vibrio furnissii CIP 102972]
Length = 279
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 77/220 (35%), Gaps = 3/220 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN++ + L +N L +R+S+GLR++ AAD+AA IA +++ + +S
Sbjct: 4 SLHTNYANLVTQNNLNSVNKALTTSMERLSTGLRINSAADDAAGLQIANRLEAQSRGMSV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S + A+ M + ++ +K+ T D ++QSE + L QL
Sbjct: 64 GMRNSQDAISMMQTAEGSMDEMTNMAYRMKDLATQAANGTNSDEDIAAMQSEFSALAGQL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ +SF G+ L + + + S V D
Sbjct: 124 EKMQTSTSFGGKQLLGSTGAFGAGDVTFQIGSSSADTLTVNVATELADLETAVGDFQAAD 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
+ + I + + I+
Sbjct: 184 LLSTNAATTMDALDSFIGELGAARSAFGAQINNLEHNINN 223
Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 36/88 (40%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ +D+ I AA G+ + + + + M + V+ GR++D D A ES +
Sbjct: 191 TTMDALDSFIGELGAARSAFGAQINNLEHNINNLANMVENVDASKGRIMDTDFAKESGVM 250
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLF 450
S Q Q Q LS +S+
Sbjct: 251 SKNQMLMQAGAQMLSATKMMPQLAMSML 278
>gi|291288629|ref|YP_003505445.1| flagellin domain protein [Denitrovibrio acetiphilus DSM 12809]
gi|290885789|gb|ADD69489.1| flagellin domain protein [Denitrovibrio acetiphilus DSM 12809]
Length = 663
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 52/352 (14%), Positives = 111/352 (31%), Gaps = 16/352 (4%)
Query: 1 MTS--ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNG 58
M+S I +N A S + + +R+SSG +++ A+D+ + ++S
Sbjct: 1 MSSVIIASNPLASKTSNYINKYQQAVNQSVERISSGKKINSASDSPSETGYISRLRSAIM 60
Query: 59 ALSAVSDAIGLGSSKVDIAKAGM---SKAIDVMSTIKNKITAGVE---RGTDSKSIQSEI 112
+ ++D + S + A + M S + V+ TI+ K D +++Q E+
Sbjct: 61 SYRKLNDNLQDSISMLQTADSAMSGTSGILSVLQTIREKAVQSQNVTLNSQDRQNLQQEV 120
Query: 113 TQLQSQLRDIARGSSFNGENWLRTDLGSS--------TASIAKSVIGSFIRDDNGKVQIT 164
L ++L +IA + FN + L ++G+ +V S +
Sbjct: 121 EDLVNELDEIASSTEFNTKKLLNGEMGAKLSGSDSALAGYATDAVESSSYYFTDIAGATK 180
Query: 165 TIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
+ + + + L + + + S + K +
Sbjct: 181 HLVTADNAPAGSASLTNPNYDYTSSLGISGSVTLSTSASTATGEYELIFSNSSDFKVYNN 240
Query: 225 ATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGN 284
T +A F TI A S TSGS + +
Sbjct: 241 GTGVVTASGSAGTEFSLNGMGITIEDDGTYAEGYKYNFSTTSGSNTLTAIDEGNRGTTAA 300
Query: 285 SDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + ++++ + + D+ + S E
Sbjct: 301 TTLTSAIWGEDAMLNSHFDIKFQYDSGELRYAAFDSSGDRMGSWTASGDEFQ 352
Score = 62.8 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 37/95 (38%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ ++ ID ++ ++ A K+GS+ + + + + M E + D D
Sbjct: 563 TTDNGSQSAIASIDEKMDIVSSEASKVGSLVNSLSTRTGLVSDMYAGFESNLSIHEDTDF 622
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
E+ A + A+ + N +R+L L
Sbjct: 623 PRETANYYAAVAGRDAALAMSAQANLVPSRVLMLL 657
>gi|114054941|gb|ABI50070.1| FlaA [Clostridium botulinum]
Length = 208
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 60/162 (37%), Gaps = 3/162 (1%)
Query: 36 RVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI 95
R++ A D+AA +I++ M+ L S S + A+ +++ ++ ++
Sbjct: 1 RINRAGDDAAGLAISEKMRGQIRGLDQASRNSQDSISLIQTAEGALTETHSILQRMRELA 60
Query: 96 TAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGS 152
G D ++I++EIT+L +++ I++ + FN + L I + +
Sbjct: 61 VQGTNDTNVTADREAIKTEITELNNEINRISQQTEFNTQKLLSGGFKDKNFQIGANKAQT 120
Query: 153 FIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
T + + + T L +
Sbjct: 121 IKLSIGDMSAKTLGVSGVSVSXAXXATDSIXTIDTALGKVST 162
Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 30/85 (35%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
T + + + + + IDT + + K+G+ +R+ + +
Sbjct: 124 SIGDMSAKTLGVSGVSVSXAXXATDSIXTIDTALGKVSTERAKLGANQNRLXHTINNLNT 183
Query: 399 MRDAVEKGVGRLVDADMASESTRLS 423
+ ++ R+ DMA E S
Sbjct: 184 SSENLQAAESRVRXVDMAKEMMAFS 208
>gi|254294673|ref|YP_003060696.1| flagellin domain protein [Hirschia baltica ATCC 49814]
gi|254043204|gb|ACT59999.1| flagellin domain protein [Hirschia baltica ATCC 49814]
Length = 274
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTS+ TN+ AM A Q+L N LE Q R+++GL+V+ A DN A ++IAQ M++D +
Sbjct: 1 MTSVNTNYGAMVALQQLNKTNSELETTQSRINTGLKVASAKDNGAIFAIAQGMRADVASY 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQS 117
V ++ S VD A A D++ +K K + + L+
Sbjct: 61 DVVQQSLDRTGSTVDTAVAAGEAVSDLLVEMKEKALGAKDDTLTTEQRAAYNEDFKALRD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAK 147
Q+ I + FNG N L++ A
Sbjct: 121 QITTIVDNAEFNGANLLKSGASDIVALANA 150
Score = 80.6 bits (196), Expect = 6e-13, Method: Composition-based stats.
Identities = 39/97 (40%), Positives = 58/97 (59%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ ++T I A+ ++G+ S I F+ + DA+E G+G LVDAD
Sbjct: 178 IDTVTKAGAAITALETSIDNVNASLARLGTGSKAIETHSTFVTKLSDAMENGIGNLVDAD 237
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+A ES +L +LQT+QQL VQALSI N+S+ LS FR
Sbjct: 238 LAKESAKLQSLQTKQQLGVQALSIANSSSGLALSFFR 274
>gi|1902806|dbj|BAA19438.1| flagellin protein [Borrelia garinii]
gi|1902808|dbj|BAA19439.1| flagellin protein [Borrelia garinii]
Length = 292
Score = 97.9 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 2 NAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 61
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 62 NLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 121
Query: 137 DLGSSTASIAK 147
S A+
Sbjct: 122 KSASQNVRTAE 132
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/275 (8%), Positives = 68/275 (24%), Gaps = 1/275 (0%)
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ I D G I+ + + +++ + N + V
Sbjct: 14 SSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRM 73
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ + N DQA+ + +A T
Sbjct: 74 KELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSASQNVRTAEE 133
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ ++ + + V + VA + + ++
Sbjct: 134 LGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVANLFSGEGAQAAQTAP 193
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+ + + + ++ I+ I+ + +G+
Sbjct: 194 VQEGVQQEGAQQPAPATAPS-QGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGA 252
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+R+ +D + + ++ ++ DA M E
Sbjct: 253 FQNRLESIKDSTEYAIENLKASYAQIKDATMTDEV 287
>gi|229149964|ref|ZP_04278191.1| Flagellin [Bacillus cereus m1550]
gi|228633501|gb|EEK90103.1| Flagellin [Bacillus cereus m1550]
Length = 218
Score = 97.5 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 36/97 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +DT I+ GS +R+ + + + ++ DAD
Sbjct: 122 ITTATDASAAITELDTAIQTVADNRATFGSQLNRLDHNLNNVNSQSTNMAASASQIEDAD 181
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + ++ + + + LS N + + L +
Sbjct: 182 MAKEMSNMTKFKILNEAGISMLSQANQTPQMVSKLLQ 218
Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/212 (10%), Positives = 57/212 (26%), Gaps = 3/212 (1%)
Query: 53 MKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQ 109
M++ G L+ + S + + ++ +++ +++ T D KS+
Sbjct: 1 MRAKEGGLNVGARNTQDAMSALRTTDSALNSISNILLRMRDLATQSANGTNGTEDQKSLN 60
Query: 110 SEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
E L++++ IA ++FNG+ L ++
Sbjct: 61 LEFAALKTEIDHIAGETNFNGKKLLAGAGTDIDVQLSDVSGDKLTISSVSAKAADLKITK 120
Query: 170 LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
++ + +++ Q+ + S + +
Sbjct: 121 DITTATDASAAITELDTAIQTVADNRATFGSQLNRLDHNLNNVNSQSTNMAASASQIEDA 180
Query: 230 AWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
K + L A P
Sbjct: 181 DMAKEMSNMTKFKILNEAGISMLSQANQTPQM 212
>gi|303325950|ref|ZP_07356393.1| flagellin FliC [Desulfovibrio sp. 3_1_syn3]
gi|302863866|gb|EFL86797.1| flagellin FliC [Desulfovibrio sp. 3_1_syn3]
Length = 297
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 96/291 (32%), Gaps = 3/291 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A + + L NL+ R+S+GLRV+ AAD+AA +I ++M++D AL
Sbjct: 3 INHNQMASNVANTLTSHYGNLQTSTKRLSTGLRVNSAADDAAGLAIRELMRTDITALQQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A + + ++ +K T I+SE + S++
Sbjct: 63 VRNANDAISLIQTADGALGVIDEKLTRMKELAEQAATGTYDSTQRLMIESEYQAMASEIT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG + L +L ST S A ++ G + DYY S+
Sbjct: 123 RIANATDFNGIHLLNGNLSGSTHSGAALSATGKLKVHFGTANDSAEDYYYIQIGASTASA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + +S K + + +
Sbjct: 183 LGVGNQATASSTTADARTVSTQEQAQKALLGLTNAVVSKDKIRAHLGALQNRLENTISNL 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
+ + T + +S + NS +
Sbjct: 243 TTQAENLQSAESRISDVDVATEMTSFVRNQILTQSSVAMLSQANSMQQMAM 293
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 28/296 (9%), Positives = 78/296 (26%)
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
N + + L L +ST ++ + + + +
Sbjct: 1 MYINHNQMASNVANTLTSHYGNLQTSTKRLSTGLRVNSAADDAAGLAIRELMRTDITALQ 60
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ ++ A + + S ++ +
Sbjct: 61 QGVRNANDAISLIQTADGALGVIDEKLTRMKELAEQAATGTYDSTQRLMIESEYQAMASE 120
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + I + + T ++T + D+ +
Sbjct: 121 ITRIANATDFNGIHLLNGNLSGSTHSGAALSATGKLKVHFGTANDSAEDYYYIQIGASTA 180
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
G + A+ + + ++ + + + +G++ +R+
Sbjct: 181 SALGVGNQATASSTTADARTVSTQEQAQKALLGLTNAVVSKDKIRAHLGALQNRLENTIS 240
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + ++ R+ D D+A+E T Q Q +V LS N+ + L
Sbjct: 241 NLTTQAENLQSAESRISDVDVATEMTSFVRNQILTQSSVAMLSQANSMQQMAMQLI 296
>gi|48716108|dbj|BAD22842.1| flagellin [Campylobacter lari]
Length = 567
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 35/260 (13%), Positives = 67/260 (25%)
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
+ VLKD + S + K L + SG A ++ ++
Sbjct: 308 ITGDMGPGAGVLKDDYKNFGRLSLVKNDGKDILISGSGLSFIGMGAGDMISQASVSLRES 367
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
G + K + S S +
Sbjct: 368 KGRIDPQMADAMGFNAYKGGGKMVITFSSIEAFMSSNGSGMSAGSGFSIGSGKEMSKIYN 427
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
V S T +I + M+ ++T
Sbjct: 428 SGNLALVTVFSNAFGFSAKNDGSSQFAAFAGTASIAANDQAPGVTTLKGAMAMMDIVETA 487
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
A IG++ ++I + I + + ++ + D D A+ES + Q
Sbjct: 488 TANLDAIRADIGAVQNQITRTLNNISVTQVNIKSAESNIRDVDFAAESANFAKFNILAQS 547
Query: 432 AVQALSIVNNSTARILSLFR 451
A+S N ++ L +
Sbjct: 548 GSYAMSQANAVQQNVMRLLQ 567
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 78/211 (36%), Gaps = 3/211 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNVASLNAQNNANLNSRALDSSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 64 INNGNDAIGILQTADKAMDEQLKILDTIKVKATQAAQDGQSTKTRNMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + + I + + ++ S
Sbjct: 124 NIANTTAFNGKQLLSGNFTNQEFQIGAQSNQTVKASIGPTQSSKIGVTRFETGSMSHSSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ + + +
Sbjct: 184 VAQLTIKNYNGIDDFKFQPVVISSSVGTGMG 214
>gi|156622696|dbj|BAF76329.1| flagellin protein [Borrelia garinii]
Length = 312
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 3/140 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS S
Sbjct: 1 INASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKA 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSS 127
+ + + +++ V+ +K D SIQ EI QL ++ IA +
Sbjct: 61 INFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQ 120
Query: 128 FNGENWLRTDLGSSTASIAK 147
+N + L S A+
Sbjct: 121 YNQMHMLSNKSASQNVRTAE 140
Score = 60.5 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 17/193 (8%), Positives = 51/193 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 120 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 179
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 180 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 239
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E +
Sbjct: 240 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAAT 299
Query: 424 ALQTQQQLAVQAL 436
Q A+ +
Sbjct: 300 TNSILTQSAMAMI 312
>gi|254294682|ref|YP_003060705.1| flagellin domain protein [Hirschia baltica ATCC 49814]
gi|254043213|gb|ACT60008.1| flagellin domain protein [Hirschia baltica ATCC 49814]
Length = 274
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTS+ TN+ AM A Q+L N LE Q R+++GL+VS A DN A ++IAQ M++D +
Sbjct: 1 MTSVNTNYGAMVALQQLNKTNSELETTQSRINTGLKVSSAKDNGAIFAIAQGMRADVASY 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQS 117
V ++ S VD A A D++ +K K + + L+
Sbjct: 61 DVVQQSLDRVGSTVDTAVAAGEAVSDLLVEMKEKALGAKDDTLTTEQRDAYNEDFKALRD 120
Query: 118 QLRDIARGSSFNGENWLRTDLG 139
Q+ I + FNG N L++
Sbjct: 121 QITTIVDNAEFNGANLLKSGAT 142
Score = 83.3 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 39/97 (40%), Positives = 58/97 (59%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ ++T I AA ++G+ S + +F+ + DA+E G+G LVDAD
Sbjct: 178 IDTVTKAGTQIAALETSIDNVNAALARLGTGSKALETHSNFVTKLSDAMEAGIGNLVDAD 237
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+A ES +L +LQT+QQL VQALSI N S+ LS FR
Sbjct: 238 LAKESAKLQSLQTKQQLGVQALSIANQSSGLALSFFR 274
>gi|16799773|ref|NP_470041.1| flagellin [Listeria innocua Clip11262]
gi|20138256|sp|Q92DW3|FLAA_LISIN RecName: Full=Flagellin
gi|16413150|emb|CAC95930.1| flagellin protein [Listeria innocua Clip11262]
Length = 287
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 61/146 (41%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN ++ + LR N + Q+R++SG R++ + D+AA ++ M + L A
Sbjct: 3 VNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S +G + A + +S ++ ++ D K +E L +L
Sbjct: 63 SKNSSMGIDLLQTADSALSSMSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKELD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
+A +++N L ++ ++
Sbjct: 123 HVADTTNYNNIKLLDQTATNAATQVS 148
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 38/96 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +E ID I + +G+ SR+ + A + + DAD
Sbjct: 190 VADADSSQEATEAIDELINNISNGRALLGAGMSRLSYNVSNVNNQSIATKASASSIEDAD 249
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA+E + ++ + Q ++ LS N + + L
Sbjct: 250 MAAEMSEMTKYKILTQTSISMLSQANQTPQMLTQLI 285
>gi|119947190|ref|YP_944870.1| flagellin domain-containing protein [Psychromonas ingrahamii 37]
gi|119865794|gb|ABM05271.1| flagellin domain protein [Psychromonas ingrahamii 37]
Length = 392
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 48/367 (13%), Positives = 110/367 (29%), Gaps = 3/367 (0%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN++ + L N + +R+S+G R++ A+D+AA I+ +++ +
Sbjct: 3 LSIQTNYANLVGQNTLNKTNADFNTSLERLSTGFRINSASDDAAGLQISNRLEAQGRGMG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G +S++ A+ M + ++ + + T D ++++E L S+
Sbjct: 63 VAMRNAGDATSQMQTAEGAMEEMTNIAYRMSDLATQSANGTASDDDRTAMEAEFQSLASE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L + ++ G+ L G A +G+ + + L
Sbjct: 123 LGSLMENTNMGGQKLLDKTDGVFAAGAISYQVGNTSAEKLSVNITAELGKVASLVGDLAG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++T + V + SG+ + S A
Sbjct: 183 AATFTEAYDTKYAEINTAAYSAAVTTAKGANNATVSGSSGYYSAYYSAESITGAATAQQQ 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
D T +A A + + + + N + T +
Sbjct: 243 ADAEAYAVTTADASRSAEAVTAGDTAGDTAANLGTSLDTMIEVAANQEASGLTLTSQTGA 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
++ T S + S + + + A +
Sbjct: 303 TNAIDTLSGFITDIGATRSQLGANINRLDHTMANLASMSENTAAAKSRIMDTDMAAESSA 362
Query: 359 LAMEEMV 365
++ +M+
Sbjct: 363 MSKNQML 369
>gi|283856292|ref|YP_162364.2| flagellin domain-containing protein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|283775288|gb|AAV89253.2| flagellin domain protein [Zymomonas mobilis subsp. mobilis ZM4]
Length = 278
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN SA+ A R + NL R+SSG ++ A+DNAA +I+ M + +
Sbjct: 1 MTVINTNTSALRAQNASRLADNNLNTAMTRLSSGKSINSASDNAAGLAISSSMTAQINGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQS 117
+ G S A + + +++ I + + +E+ QLQ
Sbjct: 61 NQAISNANDGVSLAQTADGALGEVTNMVQRINQLAVQSANGTYQNSDREDMNTEVNQLQQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASI 145
Q+ + +G++FNG TD I
Sbjct: 121 QITQVIKGTNFNGSTLFSTDTAGKKFQI 148
Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 38/97 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +S I+ + +G+ SR+ + + + R+ D D
Sbjct: 182 VATSTDALKALSTINKALTGINTTRAGLGASESRLSSVVNNLTTNVTNLSDARSRIQDTD 241
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+SE+T L+ Q Q + L+ N S +LSL +
Sbjct: 242 YSSETTNLARSQILSQASTAMLAQANQSQQNVLSLLK 278
>gi|2208923|dbj|BAA20480.1| flagellin protein [Borrelia garinii]
gi|2208925|dbj|BAA20481.1| flagellin protein [Borrelia garinii]
Length = 292
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 2 NAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 61
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 62 NLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 121
Query: 137 DLGSSTASIAK 147
S A+
Sbjct: 122 KSASQNVRTAE 132
Score = 51.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/275 (8%), Positives = 68/275 (24%), Gaps = 1/275 (0%)
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ I D G I+ + + +++ + N + V
Sbjct: 14 SSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRM 73
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ + N DQA+ + +A T
Sbjct: 74 KELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSASQNVRTAEE 133
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ ++ + + V + VA + + ++
Sbjct: 134 LGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVANLFSGEGAQVAQTAP 193
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+ + + + ++ I+ I+ + +G+
Sbjct: 194 VQDGVQQEGAQQPAPATAPS-QGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGA 252
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+R+ +D + + ++ ++ DA M E
Sbjct: 253 FQNRLESIKDSTEYAIENLKASYAQIKDATMTDEV 287
>gi|163850117|ref|YP_001638160.1| flagellin domain-containing protein [Methylobacterium extorquens
PA1]
gi|163661722|gb|ABY29089.1| flagellin domain protein [Methylobacterium extorquens PA1]
Length = 585
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 81/369 (21%), Positives = 145/369 (39%), Gaps = 2/369 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTS+LTN SAM+A L+ IN L+ +RVS+G RVS A+DNAAYWSIA +++DN +L
Sbjct: 1 MTSLLTNISAMTALTTLKGINSQLDATSNRVSTGQRVSTASDNAAYWSIATTVRTDNASL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV D++GLGSS VD A G++ + + ++ K+ ++ G D +Q+EI +Q +++
Sbjct: 61 SAVKDSLGLGSSAVDTAYNGLNSVLSDLQNLRAKLQTALQPGVDRNKVQTEIKAIQDKMK 120
Query: 121 DIARGSSFNGENWLRTDLGSST--ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ S+ +G+NWL + + ++V+ F RD G V + I ++ +
Sbjct: 121 ATSDSSTSSGQNWLSVNSSPTNTGYQATQNVVAGFSRDTTGTVGFSMIGIDVNAIKLYDV 180
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+++ + V A+ K T + + +
Sbjct: 181 ATSTVNTAATEGKVTGAQSLTGTSAFSPGGVVDFAASAGGKTKQVSFTVTLGTGASVDIV 240
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
D++ ++ + + S ++A T + + S T
Sbjct: 241 LDKSTMMSAAKDLTKVTTDEFLSAINNQIAASTAMAGKVTASLDTAGRLSFQTAATGSGT 300
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ + G T + L + A
Sbjct: 301 NAQVSVTNNAVSNGKFAAADVGFGTFSGFMTGTAFTAMDVTTAKVLTVNDGAGVKTVTLN 360
Query: 359 LAMEEMVSF 367
A +
Sbjct: 361 AASFSALGA 369
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 61/344 (17%), Positives = 110/344 (31%)
Query: 108 IQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTID 167
+S + L + + N + + S+ + + +
Sbjct: 242 DKSTMMSAAKDLTKVTTDEFLSAINNQIAASTAMAGKVTASLDTAGRLSFQTAATGSGTN 301
Query: 168 YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+ + + G + + D+ + + K
Sbjct: 302 AQVSVTNNAVSNGKFAAADVGFGTFSGFMTGTAFTAMDVTTAKVLTVNDGAGVKTVTLNA 361
Query: 228 SGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
+ A+AT + V S S + + +
Sbjct: 362 ASFSALGADATSAANTAVNGDDVAAMINAQLKTAGSKARVSFGGGALSFGSNAGGSTTIT 421
Query: 288 WVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT 347
A + T T G T + + D G
Sbjct: 422 LNGADVAGFGFTAADSTTGTSGFTGKGTAAGTTNAKGILDTVDATTTFSIGEIGTGGTGI 481
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
A ++ +++ ++ I T A K+G+ ++I Q+ F+ + A ++ +
Sbjct: 482 NIAGLVGTTGDTTLKNIITQVEKAIASVTNAGTKLGANKTQIDGQKTFVDTLMKANDRTI 541
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
G LVDAD+ EST+L ALQTQQQLAVQALSI N+ + +LSLFR
Sbjct: 542 GTLVDADIEEESTKLKALQTQQQLAVQALSIANSGSQNVLSLFR 585
>gi|54294170|ref|YP_126585.1| flagellar hook-associated protein FlgL [Legionella pneumophila str.
Lens]
gi|53754002|emb|CAH15473.1| flagellar hook-associated protein FlgL [Legionella pneumophila str.
Lens]
Length = 411
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 49/430 (11%), Positives = 126/430 (29%), Gaps = 36/430 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN L L +QD+ +SG+RV +D+ + +++K + +
Sbjct: 3 ISTNQIYQRGLDNLLTQQERLSRLQDQQASGIRVRTPSDDPVASAQIELIKQRISNIELL 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ S + + + +S ++ + ++ + ++ + Q L +
Sbjct: 63 QNNRQAADSALRLEEGILSNTVNSLHRLREIQIQSGNPSLSEEDRKTLAVEAQVLLNQLL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N GS + + S+ S NG + D+ +
Sbjct: 123 DYANTKDSNGSYMFSGSKSLTQPVSLNLSGQYVYNGDNTQRFQAVTTSLLVAVNDTGDNV 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
R + I+
Sbjct: 183 FMRIPSGNGRFAIRETVT------------------------------------PNTGTA 206
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+++ V AA N T + + ++ GN + +
Sbjct: 207 SVSSGSVINEAAFVPDNYTMTFALNSQGNLVVMVIGTLSGNVIPPSGLPDDAPLYQEGSA 266
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ ++ + +S ++ K+ + LN ++ + + +
Sbjct: 267 ISFNGMEMVVSGLPKAGDSFSISPAKNESIFSTVQRMINNLNKPYVSSVEKAATQTENNQ 326
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+++ ID+ + + +G+ +++ E D + +L + D + +T L+
Sbjct: 327 LLAQIDSALGHILSVQSDLGARLNQLETAEKANNDYLDISAATLKKLREIDPVAVATELN 386
Query: 424 ALQTQQQLAV 433
Q A
Sbjct: 387 LQLVNLQAAQ 396
>gi|306516585|gb|ADM96181.1| FlaA [Campylobacter coli]
Length = 206
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 78/205 (38%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + L+ R+SSGLR++ AAD+A+ +IA +++ L
Sbjct: 2 INTNGAALNAKANSDLNSRALDQSLARLSSGLRINSAADDASGMAIADSLRTQASTLGQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ +S + A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 62 INNGNDAASILQTADKAMDEQLKILDTIKVKATQAAQDGQSAKTRNMLQADINRLMEELD 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I + + + SS
Sbjct: 122 NIANTTSFNGKQLLSGGFINQEFQIGAQSNQTIKASIGATQSSKIGVTRFETGANVTSSS 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
+ +
Sbjct: 182 IASMTIKNYNGIDDFKIQNVVISTS 206
>gi|4432995|dbj|BAA20904.1| flagellin protein [Borrelia garinii]
Length = 289
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 2 NAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 61
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 62 NLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 121
Query: 137 DLGSSTASIAK 147
S A+
Sbjct: 122 KSASQNVRTAE 132
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/275 (8%), Positives = 68/275 (24%), Gaps = 1/275 (0%)
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ I D G I+ + + +++ + N + V
Sbjct: 14 SSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRM 73
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ + N DQA+ + +A T
Sbjct: 74 KELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSASQNVRTAEE 133
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ ++ + + V + VA + + ++
Sbjct: 134 LGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVANLFSGEGAQAAQTAP 193
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+ + + + ++ I+ I+ + +G+
Sbjct: 194 VQEGAQQEGAQQPAPATAPS-QGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGA 252
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+R+ ++ + + ++ ++ DA M E
Sbjct: 253 FQNRLESIKNSTEYAIENLKASYAQIKDATMTDEV 287
>gi|66046695|ref|YP_236536.1| flagellin [Pseudomonas syringae pv. syringae B728a]
gi|63257402|gb|AAY38498.1| Flagellin, C-terminal:Flagellin, N-terminal [Pseudomonas syringae
pv. syringae B728a]
Length = 282
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 76/208 (36%), Gaps = 3/208 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN +++S + L + L R+SSGL++ + D+AA +IA + S +
Sbjct: 3 LTVNTNVTSLSVQKNLSRASDALSTSMGRLSSGLKIMSSKDDAAGLNIATKINSQIKGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
G S A+ + ++ +++ ++ TD ++ E TQ+ S+
Sbjct: 63 MAIKNANDGMSIAQTAEGALQESTNILQRMRELAVQSRNDSNSATDRVALNKEFTQMSSE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L IA ++ NG+N + + T + + S + + ++
Sbjct: 123 LTRIANSTNLNGKNLIDGSASTMTFQVGSNSGASNQISLSLSASFDANTLGVGSAITIVG 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDI 206
S + E +
Sbjct: 183 SDSAAAETNFSASIAAIDSALQTINNTR 210
Score = 79.0 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 55/138 (39%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + S + ++ + +D+ + ++ ID+ ++
Sbjct: 145 MTFQVGSNSGASNQISLSLSASFDANTLGVGSAITIVGSDSAAAETNFSASIAAIDSALQ 204
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ ++ + + +GR+ D D A+E+ +L+ QT QQ +
Sbjct: 205 TINNTRSDLGAAQNRLSSTISNLQNINENASAALGRIQDTDFAAETAQLTKQQTLQQAST 264
Query: 434 QALSIVNNSTARILSLFR 451
L+ N + +L L +
Sbjct: 265 SILAQANQLPSAVLKLLQ 282
>gi|94495426|ref|ZP_01302006.1| flagellin [Sphingomonas sp. SKA58]
gi|94424814|gb|EAT09835.1| flagellin [Sphingomonas sp. SKA58]
Length = 253
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 3/132 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
+ +L +R+S+G R++ A D+AA +IA M + ++ G S A+
Sbjct: 2 ASKSLSTAMERLSTGKRINSAKDDAAGLAIASSMTAQIKGMTQGVRNANDGISLAQTAEG 61
Query: 80 GMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
G+ + +++ ++ +IQ+EI+QL +Q+ D + FNG
Sbjct: 62 GLGEVSNMLQRMRELTVQALNGTNDADAKSNIQAEISQLATQITDTLANTEFNGTKLFDG 121
Query: 137 DLGSSTASIAKS 148
+ + +
Sbjct: 122 STATVSIQAGAN 133
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 36/82 (43%)
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D +K +G++ +R+ + + ++ R+ DAD ++E+T L+ Q
Sbjct: 171 DDALKAIATTRANLGAVQNRLESTVNNLTNNITSLTDAKSRIEDADFSAETTALAKQQIL 230
Query: 429 QQLAVQALSIVNNSTARILSLF 450
Q + L+ N S +L L
Sbjct: 231 SQASTAMLAQANQSQQGVLKLI 252
>gi|315180465|gb|ADT87379.1| lateral flagellin [Vibrio furnissii NCTC 11218]
Length = 280
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 3/156 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN++ + L +N L +R+S+GLR++ AAD+AA IA +++ + +S
Sbjct: 4 SLHTNYANLVTQNNLNSVNKALTTSMERLSTGLRINSAADDAAGLQIANRLEAQSRGMSV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S + A+ M + ++ +K+ T D ++QSE + L QL
Sbjct: 64 GMRNSQDAISMMQTAEGSMDEMTNMAYRMKDLATQAANGTNSAEDIAAMQSEFSALAGQL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR 155
+ ++F G+ L T + IG+
Sbjct: 124 DKMQSSTNFGGQALLGTAGAFGKTNGVTFQIGTTAS 159
Score = 74.4 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 38/94 (40%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ ID+ IK +A G+ + + + + M + V+ GR++D D A
Sbjct: 186 TGTGAATAMTNIDSFIKNLGSARSAFGAQINNLEHNINNLANMVENVDASKGRIMDTDFA 245
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
ES +S Q Q Q LS +S+
Sbjct: 246 KESGVMSKNQMLMQAGAQMLSATKMMPQLAMSML 279
>gi|171059405|ref|YP_001791754.1| flagellar hook-associated protein 3 [Leptothrix cholodnii SP-6]
gi|170776850|gb|ACB34989.1| flagellar hook-associated protein 3 [Leptothrix cholodnii SP-6]
Length = 405
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 53/450 (11%), Positives = 125/450 (27%), Gaps = 55/450 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + S+ L+ L + Q +++SG ++ +D+ + A+ +
Sbjct: 3 VSTASTYESSINTLQRRQQELSLAQGQLTSGKKIGKPSDDPTGAARAERALIEQTRGETT 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
I + + +++ + A+D++ T + + A + K++ ++++L++QL
Sbjct: 63 LRVIDASRNAMTLSEGALGDAVDLVQTAREALMAAGNGSYTAGERKAVALQLSELRNQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++A NG + + + T L + +
Sbjct: 123 NVANQQDGNGGYLFGGQGVQTAPFLDAVGGVDYASTGGQINGATDERLPLSVDGQQIWLQ 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ V K+ +F
Sbjct: 183 ARSGNGVFTTAADAANSGSGWVNAGQVTDPA-----------------AYTGKSYEVSFS 225
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
G A + A+ + S K+ + + G + ++
Sbjct: 226 AGAGGALEYSITDSDGASIASNQPYSAGKAITDVPGVAFTISGTPSATGTPPDRFTVAPS 285
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ A D + + +
Sbjct: 286 QPELSVFDALDRALAVLNDPNANPGQVMQGVNAG-------------------------- 319
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ +D + ++A +G +R+ D + + D DM +
Sbjct: 320 ----LRDMDQALSSFSSARAMVGETLNRLDGVGDRTDARILSSKTTRSNAEDLDMVEAIS 375
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
S QT Q A+Q+ + V LSLF
Sbjct: 376 DFSNKQTSYQAALQSYAQVQK-----LSLF 400
>gi|94969962|ref|YP_592010.1| flagellin-like [Candidatus Koribacter versatilis Ellin345]
gi|94552012|gb|ABF41936.1| flagellin-like protein [Candidatus Koribacter versatilis Ellin345]
Length = 382
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/233 (17%), Positives = 88/233 (37%), Gaps = 6/233 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SIL N +++A +L N +L+ ++SSG R++ AD+AA SIA + ++ AL+
Sbjct: 3 LSILNNIPSLAAQNQLSITNSSLQKTLIQLSSGQRINSGADDAAGLSIADGLNANIAALT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG------TDSKSIQSEITQL 115
+ G K+ +A +S+ +++ T + ++Q+E +
Sbjct: 63 QSARNATDGVGKLQVADGALSQVTTLLNRAVTLATESANGTLNGDGGSQRTALQTEFASI 122
Query: 116 QSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
++++ I + ++FNG + + + G + D I + T
Sbjct: 123 KAEIDRIGQNTTFNGTAVFAAGTSNDPNVLMGATTGKALTDTMTTGDSLKITAGGNSFTY 182
Query: 176 LLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
S ++ ++ + + G I+ AT
Sbjct: 183 SYTSGDTVQSLLNQVNASNLGVTASLSSGQLKLVDQKGRGDIAIDSSSTATEF 235
Score = 75.9 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 33/96 (34%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + ++ I+ I A G IG+ +R+ + I + + AD+
Sbjct: 287 STAAGAKAALTDINAAISSVAALRGSIGAGINRLQAATNVINNQTQNLTTAEDGVRSADV 346
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L+ + AL+ N +L L +
Sbjct: 347 GQSVANLTKYNILTSTGISALAQANQMQQSVLKLLQ 382
>gi|308050365|ref|YP_003913931.1| flagellar hook-associated protein 3 [Ferrimonas balearica DSM 9799]
gi|307632555|gb|ADN76857.1| flagellar hook-associated protein 3 [Ferrimonas balearica DSM 9799]
Length = 404
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/435 (9%), Positives = 113/435 (25%), Gaps = 47/435 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN + L + + +SSG ++ AAD+ + + +K + ++
Sbjct: 3 IATNQFYNLNTTNLLRLQSDTNGTLQHLSSGKKIHTAADDPVASIVLENLKQQSQQINQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I L ++++ + + + +++ ++ I G + ++ + L+ I
Sbjct: 63 KANINLANNRLSQQEGRLGEYENLIMNSRDLIVQGNDGALSDENKGALAQDLRETRDAIL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ E+ G T + + D +
Sbjct: 123 ALANNQDESGNFLFGGYQTG----------------------------TKPFIEDPNGVV 154
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + R + + + S ++ ++ + +
Sbjct: 155 SYQGDSGRREAIVADGISIPVNEAGDRIFMSVPNASGDYRADYANATMTGEWFVENTEVV 214
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + T + D V + G+
Sbjct: 215 NPGAHTAGDFSIQFVDDGAGNVNVQVVDDATPPNTLLPSQPFDATVPLSFNGMEVQLSGH 274
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
A + VD ST D L ++ +
Sbjct: 275 PEIGDAVTLSGQSEVDIFSTLKDVIDMLETPAGLVGNVAQAQYAQALADMGET------- 327
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ A+ + G+ + + + + + D D A +
Sbjct: 328 --------MTHASVIRAETGNYLKSLDTYQAQHENLELVAASAQSTIEDLDYAKAISDFE 379
Query: 424 ALQTQQQLAVQALSI 438
Q +A+ A+S
Sbjct: 380 K----QSMAMTAVSQ 390
>gi|148380653|ref|YP_001255194.1| flagellin [Clostridium botulinum A str. ATCC 3502]
gi|153932133|ref|YP_001384937.1| flagellin [Clostridium botulinum A str. ATCC 19397]
gi|153935917|ref|YP_001388406.1| flagellin [Clostridium botulinum A str. Hall]
gi|148290137|emb|CAL84256.1| flagellin [Clostridium botulinum A str. ATCC 3502]
gi|152928177|gb|ABS33677.1| flagellin [Clostridium botulinum A str. ATCC 19397]
gi|152931831|gb|ABS37330.1| flagellin [Clostridium botulinum A str. Hall]
Length = 272
Score = 97.5 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 70/201 (34%), Gaps = 4/201 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + + + ++ + E V ++VSSG R++ A+D+A+ +I++ K+ LS
Sbjct: 3 IN-NANVLGSFNRITKQKFKNESVVEKVSSGKRINRASDDASGITISESFKAQVRGLSQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
G S + A + + +K D K E +L++ +
Sbjct: 62 GRNTQDGISMLQTVDAALDDISKHLYRMKEIAVKAANDTLTDEDRKLAHEEFKELKNSID 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I+ + FN L+ D + + ++ + I +
Sbjct: 122 EISDKTEFNKIKLLKEDKDLNIQIKDNPYVTYTVKLQAVNTERMDIKDSTVDTFQDASKT 181
Query: 181 TDGTERYGLLDRNHKIKVEPQ 201
++ +++
Sbjct: 182 ISSIDKALNELIKYRVNTGND 202
Score = 54.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 29/92 (31%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +S ID + G+ + + + + + R+ D+D
Sbjct: 172 VDTFQDASKTISSIDKALNELIKYRVNTGNDYNNLCQAFNDSSNSELNLTASLSRVEDSD 231
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARI 446
MAS L + L V +T I
Sbjct: 232 MASSMMNLIKGNVLSEYNKSMLVAVRETTQGI 263
>gi|196045180|ref|ZP_03112413.1| A-type flagellin [Bacillus cereus 03BB108]
gi|196024182|gb|EDX62856.1| A-type flagellin [Bacillus cereus 03BB108]
Length = 258
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 23/161 (14%), Positives = 53/161 (32%), Gaps = 3/161 (1%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+A Q L + + V + +++G ++++A+DN A +I M + +
Sbjct: 3 NARQSLYENEKRMNVAMEHLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAI 62
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSF 128
S + A+A + +++ +++ + S+ E L Q+ I + F
Sbjct: 63 SMLRTAEAALQTVTNILQRMRDLAVQSANGTNPNKNRDSLNKEFQSLTEQIGYIGETTEF 122
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
N + T + Q
Sbjct: 123 NDLSVFDGQNRPVTLDDIGHTVNITKHIPPSPTQHDIKIST 163
Score = 96.3 bits (237), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 69/239 (28%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T + +
Sbjct: 19 MEHLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNI 78
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + + T T + + + L
Sbjct: 79 LQRMRDLAVQSANGTNPNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLD 138
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + I+ ++ + +G++ +R+
Sbjct: 139 DIGHTVNITKHIPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGAMMNRLQFN 198
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+ R+ DADMA E + + ++A+ +S N + L +
Sbjct: 199 IENLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVALSMVSQANQIPQMVSKLLQ 257
>gi|87242362|gb|ABD33720.1| flagellin [Bacillus thuringiensis serovar thuringiensis]
Length = 343
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R+++A+D+AA +IA M++ L ++ G S + A + M
Sbjct: 1 AKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAM 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + ++ E L+ Q+ I++ + FN + L
Sbjct: 61 NSVSNILLRMRDISNQSANGTNTDKNQSALDKEFAALKDQIDYISKNTEFNDQKLLDGSK 120
Query: 139 GSSTASI 145
S
Sbjct: 121 KSIAIQT 127
Score = 67.1 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/333 (9%), Positives = 72/333 (21%)
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
+ S+ + + S G T G S A S + S
Sbjct: 11 SSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAMNSVSNILLRM 70
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
I+ + E K +D S +
Sbjct: 71 RDISNQSANGTNTDKNQSALDKEFAALKDQIDYISKNTEFNDQKLLDGSKKSIAIQTLDN 130
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ A + + + + + A
Sbjct: 131 ADTNKQIDIQLSNVSTKELKLDTLSIEGSSSKTFTITADDMLAVGTANATAKAKAGTLKG 190
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+ A T + + +
Sbjct: 191 LNVTTGDLTAAKTDVQDFRAAFDKVKGFMGSTEVTNIEKALTKFDGDQSLANAKAIGDAL 250
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
L T + ++ ID ++ + +G+ +R+ + +K
Sbjct: 251 TSDLATTIAKDQTYSKNVSNASSAIASIDAALESIASNRATLGATLNRLDFNVNNLKSQS 310
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
++ ++ DADMA E + ++ + + +
Sbjct: 311 SSMASAASQIEDADMAKEMSEMTKFKILNEAGI 343
>gi|54297189|ref|YP_123558.1| flagellar hook-associated protein FlgL [Legionella pneumophila str.
Paris]
gi|53750974|emb|CAH12385.1| flagellar hook-associated protein FlgL [Legionella pneumophila str.
Paris]
Length = 411
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 49/430 (11%), Positives = 128/430 (29%), Gaps = 36/430 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN L L +QD+ +SG+RV +D+ + +++K + +
Sbjct: 3 ISTNQIYQRGLDNLLTQQERLARLQDQQASGIRVRTPSDDPVASAQIELIKQRISNIELL 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ S + + + +S ++ + ++ + ++ + Q+ L +
Sbjct: 63 QNNRQAADSALRLEEGILSNTVNSLHRLREIQIQSGNPSLSEEDRKTLAVEAQALLNQLL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N GS + + S+ S NG + D+ +
Sbjct: 123 DYANTKDSNGSYMFSGSKSLTQPVSLNLSGQYVYNGDNTQRFQAVTTSLLVAVNDTGDNV 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
R + I+
Sbjct: 183 FMRIPSGNGRFAIRETVT------------------------------------PNTGTA 206
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+++ V AA N T + + ++ + GN + +
Sbjct: 207 SVSSGSVINEAAFVPDNYTMTFALNSQGNLVVMVSGTLSGNVIPPSGLPDDAPLYQEGSA 266
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ ++ + +S ++ K+ + LN ++ + + +
Sbjct: 267 ISFNGMEMVVSGLPKAGDSFSISPAKNESIFSTVQRMINNLNKPYVSSVEKAATQTENNQ 326
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+++ ID+ + + +G+ +++ E D + +L + D + +T L+
Sbjct: 327 LLAQIDSALGRILSVQSDLGARLNQLETAEKANNDYLDISAATLKKLREIDPVAVATELN 386
Query: 424 ALQTQQQLAV 433
Q A
Sbjct: 387 LQLVNLQAAQ 396
>gi|307609984|emb|CBW99513.1| flagellar hook-associated protein FlgL [Legionella pneumophila
130b]
Length = 411
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 50/430 (11%), Positives = 129/430 (30%), Gaps = 36/430 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN L L +QD+ +SG+RV +D+ + +++K + +
Sbjct: 3 ISTNQIYQRGLDNLLTQQERLSRLQDQQASGIRVRTPSDDPVASAQIELIKQRISNIELL 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ S + + + +S ++ + ++ + ++ + Q+ L +
Sbjct: 63 QNNRQAADSALRLEEGILSNTVNSLHRLREIQIQSGNPSLSEEDRKTLAVEAQALLNQLL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N GS + + S+ S NG + D+ +
Sbjct: 123 DYANTKDSNGSYMFSGSKSLTQPVSLNLSGQYVYNGDNTQRFQAVTTSLLVAVNDTGDNV 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
R + I+
Sbjct: 183 FMRIPSGNGRFAIRETVT------------------------------------PNTGTA 206
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+++ V AA N T + + ++ + GN + +
Sbjct: 207 SVSSGSVINEAAFVPDNYTMTFALNSQGNLVVMVSGTLSGNVIPPSGLPDDAPLYQEGSA 266
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ ++ + +S ++ K+ + LN ++ + + +
Sbjct: 267 ISFNGMEMVVSGLPKAGDSFSISPAKNESIFSTVQRMINNLNKPYVSSVEKAATQTENNQ 326
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+++ ID+ + C + +G+ +++ E D + +L + D + +T L+
Sbjct: 327 LLAQIDSALGCILSVQSDLGARLNQLETAEKANNDYLDISAATLKKLREIDPVAVATELN 386
Query: 424 ALQTQQQLAV 433
Q A
Sbjct: 387 LQLVNLQAAQ 396
>gi|21242720|ref|NP_642302.1| flagellar hook-associated protein FlgL [Xanthomonas axonopodis pv.
citri str. 306]
gi|21108195|gb|AAM36838.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 401
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 56/443 (12%), Positives = 115/443 (25%), Gaps = 55/443 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ + + L ++ ++SSG R+ A D+ A + A++
Sbjct: 5 ISTSMMYSQSVASMGAKQSRLNQLESQLSSGQRLVTAKDDPVAAGTAVGLDRALAAITRF 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ +++ + + +S+A D M+ + D K+I SE+T L+ +
Sbjct: 65 GENANNVQNRLGLQENALSQAGDKMARVTELAVQASNSSLSPDDRKAIASELTALRESMV 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G S I + ++ D K D ++ +
Sbjct: 125 SLANSTDGTGRYLFGGTADGSAPFIKSNGSVTYNGDQTQKQVEVAPDTFVSDTLPGSEIF 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G +D + L T + + +
Sbjct: 185 MRIRTGDGTVDAHANAANTGTGLLLDFSRDASTGSWNGGSYSVQFTAADTYEVRDSTNTV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
G + AA + + S + AS T D
Sbjct: 245 VGTGTYKEGEDINAAGVRMRISGAPAVGDSFQIGASGTKDVFSTIDDL------------ 292
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ LN
Sbjct: 293 ----------------------------------------VGALNSDTLTAPQKAAMINT 312
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ + I A G+ S I ++ ++ + + D D AS
Sbjct: 313 LQSSMRDITQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTSLSSIRDLDYASAIG 372
Query: 421 RLSALQTQQQLAVQALSIVNNST 443
+ + Q A L + +S+
Sbjct: 373 QYQLEKASLQAAQTILQQMQSSS 395
>gi|16802732|ref|NP_464217.1| flagellin [Listeria monocytogenes EGD-e]
gi|47095256|ref|ZP_00232867.1| flagellin [Listeria monocytogenes str. 1/2a F6854]
gi|224498772|ref|ZP_03667121.1| flagellin [Listeria monocytogenes Finland 1988]
gi|254829347|ref|ZP_05234034.1| flagellin protein [Listeria monocytogenes FSL N3-165]
gi|254830319|ref|ZP_05234974.1| flagellin [Listeria monocytogenes 10403S]
gi|254900074|ref|ZP_05259998.1| flagellin [Listeria monocytogenes J0161]
gi|254911373|ref|ZP_05261385.1| flagellin protein [Listeria monocytogenes J2818]
gi|254935700|ref|ZP_05267397.1| flagellin protein [Listeria monocytogenes F6900]
gi|255025856|ref|ZP_05297842.1| flagellin [Listeria monocytogenes FSL J2-003]
gi|284801020|ref|YP_003412885.1| flagellin [Listeria monocytogenes 08-5578]
gi|284994162|ref|YP_003415930.1| flagellin [Listeria monocytogenes 08-5923]
gi|315281349|ref|ZP_07869991.1| flagellin [Listeria marthii FSL S4-120]
gi|17433724|sp|Q02551|FLAA_LISMO RecName: Full=Flagellin
gi|16410079|emb|CAC98768.1| flagellin protein [Listeria monocytogenes EGD-e]
gi|47016327|gb|EAL07249.1| flagellin [Listeria monocytogenes str. 1/2a F6854]
gi|159153830|gb|ABW93423.1| flagellin [Listeria monocytogenes]
gi|159153836|gb|ABW93426.1| flagellin [Listeria monocytogenes]
gi|159153838|gb|ABW93427.1| flagellin [Listeria monocytogenes]
gi|159153842|gb|ABW93429.1| flagellin [Listeria monocytogenes]
gi|209512835|gb|ACI49720.1| FlaA [Listeria monocytogenes]
gi|258601760|gb|EEW15085.1| flagellin protein [Listeria monocytogenes FSL N3-165]
gi|258608283|gb|EEW20891.1| flagellin protein [Listeria monocytogenes F6900]
gi|284056582|gb|ADB67523.1| flagellin [Listeria monocytogenes 08-5578]
gi|284059629|gb|ADB70568.1| flagellin [Listeria monocytogenes 08-5923]
gi|293589310|gb|EFF97644.1| flagellin protein [Listeria monocytogenes J2818]
gi|313615005|gb|EFR88507.1| flagellin [Listeria marthii FSL S4-120]
Length = 287
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 60/146 (41%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN ++ + LR N + Q+R++SG R++ + D+AA ++ M + L A
Sbjct: 3 VNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S +G + A + +S ++ ++ D K +E L +L
Sbjct: 63 SKNSSMGIDLLQTADSALSSMSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKELD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
+A +++N L + ++
Sbjct: 123 HVADTTNYNNIKLLDQTATGAATQVS 148
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 38/96 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ++ ID I + +G+ SR+ + A + + DAD
Sbjct: 190 VADADSSQQATEAIDELINNISNGRALLGAGMSRLSYNVSNVNNQSIATKASASSIEDAD 249
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA+E + ++ + Q ++ LS N + + L
Sbjct: 250 MAAEMSEMTKYKILTQTSISMLSQANQTPQMLTQLI 285
>gi|78485793|ref|YP_391718.1| flagellin-like [Thiomicrospira crunogena XCL-2]
gi|78364079|gb|ABB42044.1| Flagellin [Thiomicrospira crunogena XCL-2]
Length = 287
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 39/87 (44%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
VS +D + G++ +R+ + + + ++ R+ DAD A ES L+
Sbjct: 201 VSKLDVVMSKLNLQRASWGAVQNRLESTVSNLSNVNENIQGARSRIEDADFAKESANLAR 260
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ + LS N + +LSL R
Sbjct: 261 TQVLQQAGMSMLSQANQQSQNVLSLLR 287
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +A++A++ L + + + +R++SG R++ AAD+AA +I M +
Sbjct: 4 VINTNMAAINANRILSNTTVDQQSAMERLTSGKRINGAADDAAGLAITTKMTTQVMGTDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
G +K+ A + ++M ++ + + +Q E + LQ ++
Sbjct: 64 SIRNANDGMAKIQTADGATEEISNMMQRMRELGVQALNGTYSTANRSQMQEEFSALQEEI 123
Query: 120 RDIARGSSFNGENWLRTDL 138
+A+ + FNG N L +
Sbjct: 124 DRVAQTTKFNGVNLLNSAA 142
>gi|15895436|ref|NP_348785.1| flagellin family protein [Clostridium acetobutylicum ATCC 824]
gi|15025161|gb|AAK80125.1|AE007717_2 Flagellin family protein [Clostridium acetobutylicum ATCC 824]
gi|325509582|gb|ADZ21218.1| Flagellin family protein [Clostridium acetobutylicum EA 2018]
Length = 283
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 70/156 (44%), Gaps = 3/156 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A+S + + + +R+SSGL+++ A D A ++ M+ +
Sbjct: 3 INHNMAALSLFYEQKSVEGQQATSLERISSGLKINSAKDGPAALEKSEKMRMQIRGMQMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ + G S A+ GMS D++ +++ + + +D K+IQ EI ++++ +
Sbjct: 63 ARNVQDGISMFQTAEGGMSNVSDMLQRMRDLVLESGDSSKTDSDKKNIQLEIDEIKNGIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRD 156
DI + ++FNG+ L ++ S
Sbjct: 123 DITKNTNFNGKPLLASNEKSEITIGNNVGETVQFSF 158
Score = 80.6 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 34/86 (39%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ ID+ + A + G+I +R + + + V++ + D+D+A E +
Sbjct: 193 LATIDSALSTVLDARAQYGAIENRFEDTYNNLNSFSEGVQQAESDIRDSDVADEMITYTK 252
Query: 425 LQTQQQLAVQALSIVNNSTARILSLF 450
L+ N IL++
Sbjct: 253 TGVLMNAGDAMLAQANQLPKDILNIL 278
>gi|330822307|ref|YP_004362528.1| Flagellin [Burkholderia gladioli BSR3]
gi|327374144|gb|AEA65498.1| Flagellin [Burkholderia gladioli BSR3]
Length = 384
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 74/206 (35%), Gaps = 3/206 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++ A Q L L R+SSG +++ AAD+AA +IA M++ L
Sbjct: 1 MLGINTNINSLVAQQNLNGSQSALSQAITRLSSGSKINSAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQS 117
+ S + A + +S + I T + Q E+ +
Sbjct: 61 NQGVQNTNSAVSLIQTASSQLSALTSSLQRISTLATEAANGTLSQSDQVAAQQEVADQIA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA ++FNG+N L G T + +V + D + + I L +
Sbjct: 121 EVNRIASQTNFNGKNLLDGSAGIVTFQVGANVGQTVTLDLSQSLSAAKIGGGLVQSGQTV 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVL 203
+ + V
Sbjct: 181 GTIQGLSLDANGAATTAAQPAITSVN 206
Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 48/138 (34%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T+ + T +T+ + + +N + + + + + + +
Sbjct: 247 TNLTLATGATSGMTAAQASAATQMVSQINKVNAPPTVSNLSISSATGANQTIFSVANALS 306
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ + + ++ AD A E+ LS Q QQ +
Sbjct: 307 TINNLQATLGATQNRLQAVAQTQQANSTNLSSAQSQIQSADFAQETANLSRAQVLQQAGI 366
Query: 434 QALSIVNNSTARILSLFR 451
L+ N+ ++L L +
Sbjct: 367 SVLAQANSLPQQVLKLLQ 384
>gi|46019723|emb|CAG25467.1| flagellin [Bacillus thuringiensis serovar alesti]
Length = 277
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/227 (16%), Positives = 80/227 (35%), Gaps = 3/227 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 3 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 63 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEID 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++FNG +L T ++ + + ITT T +
Sbjct: 123 HIADKTNFNGNAFLSGGGKDITIQLSDASNDTMKITAIDTKAITTATLATPTATGADKAL 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+ + + I+ + ++ +
Sbjct: 183 NAASAPAQITALDTAIQEIADARATFGSQLNRLDHNLNNVTSQATNM 229
Score = 89.0 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 45/130 (34%)
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
S + + + TL D + ++ +DT I+ A
Sbjct: 148 SDASNDTMKITAIDTKAITTATLATPTATGADKALNAASAPAQITALDTAIQEIADARAT 207
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
GS +R+ + + + ++ DADMA E + ++ + + + LS N
Sbjct: 208 FGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKILNEAGISMLSQANQ 267
Query: 442 STARILSLFR 451
+ + L +
Sbjct: 268 TPQMVSKLLQ 277
>gi|1648840|dbj|BAA13582.1| flagellin protein [Borrelia garinii]
Length = 292
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 2 NAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 61
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 62 NLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 121
Query: 137 DLGSSTASIAK 147
S A+
Sbjct: 122 KSASQNVRTAE 132
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/275 (8%), Positives = 68/275 (24%), Gaps = 1/275 (0%)
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ I D G I+ + + +++ + N + V
Sbjct: 14 SSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRM 73
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ + N DQA+ + +A T
Sbjct: 74 KELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSASQNVRTAEE 133
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ ++ + + V + VA + + ++
Sbjct: 134 LGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVANLFSGEGAQTAQAAP 193
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+ + + + ++ I+ I+ + +G+
Sbjct: 194 VQEGAQQEGAQQPAPATAPS-QGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGA 252
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+R+ +D + + ++ ++ DA M E
Sbjct: 253 FQNRLESIKDSTEYAIENLKASYAQIKDATMTDEV 287
>gi|1902792|dbj|BAA19431.1| flagellin protein [Borrelia garinii]
gi|1902810|dbj|BAA19440.1| flagellin protein [Borrelia garinii]
gi|1902812|dbj|BAA19441.1| flagellin protein [Borrelia garinii]
gi|1902814|dbj|BAA19442.1| flagellin protein [Borrelia garinii]
gi|1902818|dbj|BAA19444.1| flagellin protein [Borrelia garinii]
Length = 292
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 2 NAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 61
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 62 NLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 121
Query: 137 DLGSSTASIAK 147
S A+
Sbjct: 122 KSASQNVRTAE 132
Score = 51.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/275 (8%), Positives = 68/275 (24%), Gaps = 1/275 (0%)
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ I D G I+ + + +++ + N + V
Sbjct: 14 SSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRM 73
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ + N DQA+ + +A T
Sbjct: 74 KELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSASQNVRTAEE 133
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ ++ + + V + VA + + ++
Sbjct: 134 LGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVANLFSGEGAQAAQTAP 193
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+ + + + ++ I+ I+ + +G+
Sbjct: 194 VQEGAQQEGAQQPAPATAPS-QGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGA 252
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+R+ +D + + ++ ++ DA M E
Sbjct: 253 FQNRLESIKDSTEYAIENLKASYAQIKDATMTDEV 287
>gi|293115383|ref|ZP_05791245.2| flagellar hook-associated protein 3 [Butyrivibrio crossotus DSM
2876]
gi|292810061|gb|EFF69266.1| flagellar hook-associated protein 3 [Butyrivibrio crossotus DSM
2876]
Length = 491
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/476 (9%), Positives = 107/476 (22%), Gaps = 50/476 (10%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD-AIGLG 70
+ + NL ++ +++ +++ +D+ A ++S ++ I
Sbjct: 5 QTLRNVSKSKNNLNTSENELATEKKITRPSDDPIVAIRALSLRSSLSEINQYLKHNIPDA 64
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSS 127
S +D+ + ++ ++S I D +I + Q ++ + A
Sbjct: 65 ESWLDVTHSSLNNMDGILSDIFQYCNQGSSDQFTTNDRSAIIDVLKQYRTAIYSEANADY 124
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
+ +S + + + +V T
Sbjct: 125 AGRYCFTGYKTDTSFTFLTSTESDKKYEITETFKAEAVTTDNIMKNSVDATKVTGINAEK 184
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
R + + T + + + + G
Sbjct: 185 YPETRKVYRVRLAYQGCAKALDSGNDLKFSVTDANGTTDYTPNAVSRSEFEKMVSDGTFD 244
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
T + + TN
Sbjct: 245 KATDSLYYIYDTGEVVMTDDLYTKFSNCDGMSFTYQKDSFNAGDVRPEMYFNCTDITNPG 304
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV-- 365
T S+ + + +A L +E +
Sbjct: 305 NPVKYTLESDESISYTVNFSQSLQVNTLGRNALSYDIGRDIDDMCNALQSVLDIENKIAK 364
Query: 366 ---------------SFIDTQI-----------------------------KCATAAAGK 381
IDT I + +
Sbjct: 365 LKTMKESGAYSDDEKKNIDTMIAASEKEHDYALDNMKKTFSKEITNVKEYQQTVSLELAD 424
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G+ +R+ L +D + + R D D+ + S+ +T Q A+ A S
Sbjct: 425 LGARQNRLTLTKDRLSEQYTTFDDLKSRNEDVDLEDVVIKFSSARTLYQAALSAAS 480
>gi|237796134|ref|YP_002863686.1| flagellin [Clostridium botulinum Ba4 str. 657]
gi|229262722|gb|ACQ53755.1| flagellin [Clostridium botulinum Ba4 str. 657]
gi|322807024|emb|CBZ04596.1| flagellin protein FlaA [Clostridium botulinum H04402 065]
Length = 272
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 70/201 (34%), Gaps = 4/201 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + + + ++ + E V ++VSSG R++ A+D+A+ +I++ K+ LS
Sbjct: 3 IN-NANVLGSFNRITKQKFKNESVVEKVSSGKRINRASDDASGITISESFKAQVRGLSQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
G S + A + + +K D K E +L++ +
Sbjct: 62 GRNTQDGISMLQTVDAALDDISKHLYRMKEIAVKAANDTLTDEDRKLAHEEFKELKNSID 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I+ + FN L+ D + + ++ + I +
Sbjct: 122 EISDKTEFNKIKLLKEDKDLNIQIKDNPYVTYTVKLQAVNTERMDIKDSTVDTFQDASKA 181
Query: 181 TDGTERYGLLDRNHKIKVEPQ 201
++ +++
Sbjct: 182 ISSIDKALNELIKYRVNTGND 202
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 29/92 (31%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +S ID + G+ + + + + + R+ D+D
Sbjct: 172 VDTFQDASKAISSIDKALNELIKYRVNTGNDYNNLCQAFNDSSNSELNLTASLSRVEDSD 231
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARI 446
MAS L + L V +T I
Sbjct: 232 MASSMMNLIKGNVLSEYNKSMLVAVRETTQGI 263
>gi|1902794|dbj|BAA19432.1| flagellin protein [Borrelia garinii]
gi|1902796|dbj|BAA19433.1| flagellin protein [Borrelia garinii]
gi|1902798|dbj|BAA19434.1| flagellin protein [Borrelia garinii]
gi|1902800|dbj|BAA19435.1| flagellin protein [Borrelia garinii]
gi|1902802|dbj|BAA19436.1| flagellin protein [Borrelia garinii]
gi|1902804|dbj|BAA19437.1| flagellin protein [Borrelia garinii]
gi|1902816|dbj|BAA19443.1| flagellin protein [Borrelia garinii]
Length = 292
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 2 NAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 61
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 62 NLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 121
Query: 137 DLGSSTASIAK 147
S A+
Sbjct: 122 KSASQNVRTAE 132
Score = 51.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/168 (8%), Positives = 44/168 (26%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + T+ G + + A+ S N + +
Sbjct: 120 SNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVAN 179
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ T + + + + ++ I+
Sbjct: 180 LFSGEGAQATQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENA 239
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
I+ + +G+ +R+ +D + + ++ ++ DA M E
Sbjct: 240 IRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEV 287
>gi|90579917|ref|ZP_01235725.1| flagellar hook-associated protein [Vibrio angustum S14]
gi|90438802|gb|EAS63985.1| flagellar hook-associated protein [Vibrio angustum S14]
Length = 411
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 50/450 (11%), Positives = 124/450 (27%), Gaps = 49/450 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T S + L + +++S+G RV A D+ Q + +
Sbjct: 5 VSTASQYQSLTSNLMRKQGEVNESNNQLSTGKRVETAGDDPVSSVTIQNYRQQLTQIDQY 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI---TAGVERGTDSKSIQSEITQLQSQLR 120
+I + ++++ + ++ ++ D + K K+ G D + + E+T L+ L
Sbjct: 65 KSSITMANNRLGVMESSIAGVEDNLDAAKQKVLRMINGAMASNDRTAFKDELTSLRDGLL 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++A +G + + + + + D+ ++ D
Sbjct: 125 ELANSRDESGNYVFAGNQMDTQPFVKGTDGKMNYQGDSQSRYAQIDKSVEVKTSLPGDQL 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
F + +
Sbjct: 185 -----------------------------------------FTSIPNPYGDFRPDFSDLS 203
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + A S + S + N + + +
Sbjct: 204 SGSKLHVLSATTSDFTKAQPIDIAFSEAVVTQPDGSEKTVMQYNLSLDGKEVVADQDYDP 263
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T A + +D + ++I+ S+ T + +
Sbjct: 264 EKGVQYTAADGSSVSITLDDVEVGDKLTLNPAQKINIFDSLQDAIDNAEKPTSSAAAEAT 323
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ++ ID+ + ++G+I ++ Q++ + L D D +
Sbjct: 324 LQRVIDDIDSSFLHVSQRRSEVGTIMQQVERQQEQHLDFELTLNSAQSGLEDLDYSKAIM 383
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q + A S LSLF
Sbjct: 384 EMNQQMMALQASQSAFSKTKQ-----LSLF 408
>gi|303248689|ref|ZP_07334943.1| flagellin domain protein [Desulfovibrio fructosovorans JJ]
gi|302489945|gb|EFL49871.1| flagellin domain protein [Desulfovibrio fructosovorans JJ]
Length = 297
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 62/168 (36%), Gaps = 3/168 (1%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ L L R+SSGLR++ AAD+AA +I ++M+SD L+ S +
Sbjct: 16 RNLSHSYGALATSTQRLSSGLRINTAADDAAGLAIRELMRSDVATLNQGVRNANDAISMI 75
Query: 75 DIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
A + + + +K I SE + S++ IA + FNG
Sbjct: 76 QTADGALQVVDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMASEITRIAMATDFNGI 135
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
L +L + A ++ G + DYY S
Sbjct: 136 YLLNGNLSGANYDGAGINSVGKLKVHFGTGNSSAEDYYYVRIGNSTAS 183
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 49/135 (36%)
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
S+ D + V + + + + + ++ + I T I
Sbjct: 163 GTGNSSAEDYYYVRIGNSTASALGVGMGAAAGTSGRSISTQEMAQKALDAIQTAIVSKDK 222
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G++ +R+ +++ + ++ ++ D D+A+E T Q Q AV LS
Sbjct: 223 IRANLGALQNRLENTISNLQIQAENLQSAESQISDVDVATEMTNFVRNQILTQSAVAMLS 282
Query: 438 IVNNSTARILSLFRG 452
N+ + L G
Sbjct: 283 QANSLPKMAMQLISG 297
>gi|295401180|ref|ZP_06811153.1| flagellar hook-associated protein 3 [Geobacillus
thermoglucosidasius C56-YS93]
gi|294976773|gb|EFG52378.1| flagellar hook-associated protein 3 [Geobacillus
thermoglucosidasius C56-YS93]
Length = 304
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 48/139 (34%), Gaps = 3/139 (2%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A + + L + L Q+++ +G ++S +D+ + D + IG
Sbjct: 9 ANNMLRNLSNSYERLGKYQEQLVTGKKISRPSDDPVVAMKGIAYREDLARVKQYQRNIGE 68
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGS 126
+ +D A + K + ++ + D K I EI Q+Q + D+A
Sbjct: 69 VHNWIDSADDALDKVGLALQRVQELVVQASTDTATPEDRKKIADEIEQIQKHIVDVANTK 128
Query: 127 SFNGENWLRTDLGSSTASI 145
+ D +
Sbjct: 129 VGGKYIFNGADTKNPLFIG 147
Score = 45.1 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 25/68 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ + I+ Q AA ++G+ +R+ + E+ + K + D +
Sbjct: 210 TKTGDDIDGYLGKIEAQQDALLAARSELGAKQNRVEMMENRLSTQEVIATKLMSNNEDIE 269
Query: 415 MASESTRL 422
T L
Sbjct: 270 YEKTITDL 277
>gi|48716122|dbj|BAD22849.1| flagellin [Campylobacter lari]
Length = 566
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 41/138 (29%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+V S T +I ++ +T I
Sbjct: 429 NLAFVTAFSVAFGFSAKGDGTSQFAAFAGTASIAAKDQQAGVTTLKGAMAVMDIAETAIT 488
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ ++I + I + + ++ + D D A+ES + Q
Sbjct: 489 NLDQIRADLGAVQNQITATLNNISVTQVNIKSAESNIRDVDFAAESANFAKFNILAQSGS 548
Query: 434 QALSIVNNSTARILSLFR 451
A+S N ++ L +
Sbjct: 549 YAMSQANAVQQNVMRLLQ 566
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 78/211 (36%), Gaps = 3/211 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNVASLNAQNNANLNSRALDSSLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 64 INNGNDALGILQTADKAMDEQLKILDTIKVKATQAAQDGQSTKTRNMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + + I + + ++ S
Sbjct: 124 NIANTTAFNGKQLLSGGFTNQSFQIGAQSNQTIQASIGATQSSKIGVTRFETGSMSHSSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ + + +
Sbjct: 184 VAQLTIKNYNGIDDFKFQPVVISSSVGTGMG 214
>gi|83593869|ref|YP_427621.1| flagellin-like [Rhodospirillum rubrum ATCC 11170]
gi|83576783|gb|ABC23334.1| Flagellin-like [Rhodospirillum rubrum ATCC 11170]
Length = 298
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 91/288 (31%), Gaps = 3/288 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN SA SA + L +R++SG +++ A+D+A+ ++A ++++ L
Sbjct: 1 MPVITTNTSANSALRYLNMNAAEQTNSLNRIASGSKINRASDDASGLAVATKLQTNVSTL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ + +S + A G+S+ D++ +K + T+ I +E QL
Sbjct: 61 NQAATNASHATSILQTADGGLSQISDILQRMKTLTAQSISGAVTNTERAYINAEYDQLVK 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ I ++FNG+ L+ + S I
Sbjct: 121 EIDSIVASTTFNGDQLLKGTGAGYSGSFLVGTNAGTSGSTANSDIIDIKITSGTTLGDGT 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
++ G + L ++ + + + + + + A
Sbjct: 181 FNAVAGLDLETTLYKSGATTNKEDIDAAQLAATAIDKAISAVAGARADVGAQMSRFQFQA 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
+ A S A+ + N
Sbjct: 241 AQIASSTENLDAAQSAITDADVAKEQSNFSSAQVKTNAAIAALSQANQ 288
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 33/80 (41%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ ID I A +G+ SR Q I + ++ + DAD+A E + S
Sbjct: 211 AATAIDKAISAVAGARADVGAQMSRFQFQAAQIASSTENLDAAQSAITDADVAKEQSNFS 270
Query: 424 ALQTQQQLAVQALSIVNNST 443
+ Q + A+ ALS N
Sbjct: 271 SAQVKTNAAIAALSQANQMP 290
>gi|2208921|dbj|BAA20479.1| flagellin protein [Borrelia garinii]
Length = 292
Score = 97.1 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 2 NAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 61
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 62 NLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 121
Query: 137 DLGSSTASIAK 147
S A+
Sbjct: 122 KSASQNVRTAE 132
Score = 51.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/168 (8%), Positives = 44/168 (26%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + T+ G + + A+ S N + +
Sbjct: 120 SNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVAN 179
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ T + + + + ++ I+
Sbjct: 180 LFSGEGAQAAQTAPVQDGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENA 239
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
I+ + +G+ +R+ +D + + ++ ++ DA M E
Sbjct: 240 IRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEV 287
>gi|2208917|dbj|BAA20477.1| flagellin protein [Borrelia garinii]
Length = 292
Score = 97.1 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 2 NAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 61
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 62 NLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 121
Query: 137 DLGSSTASIAK 147
S A+
Sbjct: 122 KSASQNVRTAE 132
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/275 (8%), Positives = 68/275 (24%), Gaps = 1/275 (0%)
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ I D G I+ + + +++ + N + V
Sbjct: 14 SSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRM 73
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ + N DQA+ + +A T
Sbjct: 74 KELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSASQNVRTAEE 133
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ ++ + + V + VA + + ++
Sbjct: 134 LGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVANLFSGEGAQTAQTAP 193
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+ + + + ++ I+ I+ + +G+
Sbjct: 194 VQDGVQQEGAQQPAPATAPS-QGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGA 252
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+R+ +D + + ++ ++ DA M E
Sbjct: 253 FQNRLESIKDSTEYAIENLKASYAQIKDATMTDEV 287
>gi|307731400|ref|YP_003908624.1| flagellin domain-containing protein [Burkholderia sp. CCGE1003]
gi|307585935|gb|ADN59333.1| flagellin domain protein [Burkholderia sp. CCGE1003]
Length = 390
Score = 97.1 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 56/381 (14%), Positives = 119/381 (31%), Gaps = 3/381 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +I+ M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQSALSQAITRLSSGKRINSAADDAAGLAISTRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
G S + A + +S + I+ +D ++Q E+ Q
Sbjct: 61 GQGVSNANDGVSLIQTASSALSSLTSSLQRIRTLAVQASTGTMSSSDQAALQKEVAQQIQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG N L G + +V + D + + ++ L
Sbjct: 121 EVNRIASQTTYNGTNILDGSAGIVGFQVGANVGQTINLDLSKSMSAASLGSGSLATGQLA 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + + +S T + + + A +
Sbjct: 181 GTISGLDIDASTGAAATAGATGATITSINVLSDGHGGFTFTDQNGSAINATVAGSIFSTG 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
T A + I + A T + + S + + A + + +T +
Sbjct: 241 TSTGATTTSPITTLTMSTGAYDTTNAALTTSITNATAQIGAVNASNTTVSSLDISTVSGA 300
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
++ + V N + + + + S IT
Sbjct: 301 NVAMIAIDNALTAVSNLQASLGAAQNRFSAIATSQQAEATDLSSAQSQITDANFAQETAN 360
Query: 358 KLAMEEMVSFIDTQIKCATAA 378
+ + + + A +
Sbjct: 361 LSKAQVLQQAGISVLAQANSQ 381
Score = 83.3 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 52/387 (13%), Positives = 110/387 (28%), Gaps = 6/387 (1%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ ++ +++ +S+AI +S+ K + D + + T++Q+Q+ + +G
Sbjct: 9 NSLVAQQNLNGSQSALSQAITRLSSGK-----RINSAADDAAGLAISTRMQTQINGLGQG 63
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + SS S S + T +
Sbjct: 64 VSNANDGVSLIQTASSALSSLTSSLQRIRTLAVQASTGTMSSSDQAALQKEVAQQIQEVN 123
Query: 186 R-YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKG 244
R N ++ + TI+ K + + +
Sbjct: 124 RIASQTTYNGTNILDGSAGIVGFQVGANVGQTINLDLSKSMSAASLGSGSLATGQLAGTI 183
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
A A T T S + + + + AT SI S T
Sbjct: 184 SGLDIDASTGAAATAGATGATITSINVLSDGHGGFTFTDQNGSAINATVAGSIFSTGTST 243
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
+T T T ++ + ++ +
Sbjct: 244 GATTTSPITTLTMSTGAYDTTNAALTTSITNATAQIGAVNASNTTVSSLDISTVSGANVA 303
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ ID + + +G+ +R + + ++ DA+ A E+ LS
Sbjct: 304 MIAIDNALTAVSNLQASLGAAQNRFSAIATSQQAEATDLSSAQSQITDANFAQETANLSK 363
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ + L+ N+ ++L L +
Sbjct: 364 AQVLQQAGISVLAQANSQPQQVLKLLQ 390
>gi|90418379|ref|ZP_01226291.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1]
gi|90338051|gb|EAS51702.1| flagellin protein [Aurantimonas manganoxydans SI85-9A1]
Length = 322
Score = 97.1 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 84/226 (37%), Positives = 118/226 (52%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN SAM+A Q L IN +L+ Q+R+S+G RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNTSAMTALQSLSAINSSLDQTQNRISTGYRVGAASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV DA+GLG +KVD+A GM AIDV S IK+K+ A +E G D I SE+T+L++QL
Sbjct: 61 GAVEDALGLGQAKVDVAYTGMEAAIDVTSEIKSKLLAALEPGVDKTKINSELTELKNQLS 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SF+GENWL+ ++ + + N V ++ D +
Sbjct: 121 SIASSASFSGENWLQNSTATAAGTKNVVSSFNRDSGGNVSVGTIGLNVSSMTLIGTDDET 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ D+ + + + T +T
Sbjct: 181 LGLLTKDYDADQLLATPTTTPDNYRLIDVTGETTSATGTVIALAST 226
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 65/319 (20%), Positives = 112/319 (35%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ S + N + D ++T ++ L
Sbjct: 4 INTNTSAMTALQSLSAINSSLDQTQNRISTGYRVGAASDNAAYWSIATTMRSDNKALGAV 63
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + + + A S K KL + + + +
Sbjct: 64 EDALGLGQAKVDVAYTGMEAAIDVTSEIKSKLLAALEPGVDKTKINSELTELKNQLSSIA 123
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+A + S + + + + T +++S
Sbjct: 124 SSASFSGENWLQNSTATAAGTKNVVSSFNRDSGGNVSVGTIGLNVSSMTLIGTDDETLGL 183
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
T Y + + + T + + MV +D +
Sbjct: 184 LTKDYDADQLLATPTTTPDNYRLIDVTGETTSATGTVIALASTTTDAQVNAMVRVVDKIL 243
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
T AA +G+ SR+ +Q +F+ +R++++KGVG LVDADM ESTRL ALQTQQQL
Sbjct: 244 SDMTTAASNLGASKSRMDIQSEFVSNLRNSIDKGVGTLVDADMTEESTRLKALQTQQQLG 303
Query: 433 VQALSIVNNSTARILSLFR 451
VQALSI N+S+ +LSLFR
Sbjct: 304 VQALSIANSSSQSVLSLFR 322
>gi|38018078|gb|AAR08139.1| flagellin [Aeromonas hydrophila]
Length = 235
Score = 97.1 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 56/155 (36%), Gaps = 3/155 (1%)
Query: 33 SGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIK 92
SGLR++ A D+AA I+ + S L + G S A+ M + ++ ++
Sbjct: 1 SGLRINTAKDDAAGLQISNRLTSQINGLDQGNRNANDGISVAQTAEGAMDEVTSMLQRMR 60
Query: 93 NKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSV 149
D ++Q E QL +++ I+ ++F G+ L + S A +
Sbjct: 61 TLAQQSANGSNNTDDRTALQQEFDQLTTEINRISNDTTFGGQKLLDGNYKGSFQVGADAG 120
Query: 150 IGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + TV ++ +
Sbjct: 121 QTITFKMTSAFTISGIAASTKGSATVATSATGEPY 155
Score = 40.9 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 14/186 (7%), Positives = 40/186 (21%)
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + T GA + + +
Sbjct: 32 NRNANDGISVAQTAEGAMDEVTSMLQRMRTLAQQSANGSNNTDDRTALQQEFDQLTTEIN 91
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
S G + + +D G T + T + + +
Sbjct: 92 RISNDTTFGGQKLLDGNYKGSFQVGADAGQTITFKMTSAFTISGIAASTKGSATVATSAT 151
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + + + ++ +D IK + ++G++ +R
Sbjct: 152 GEPYQSDQGYVRRRLLTSVSSIKAASSAQLAMANLDFMIKAVDSKRAELGAVQNRFDSTI 211
Query: 394 DFIKLM 399
Sbjct: 212 RNQSTR 217
>gi|1741961|dbj|BAA12717.1| flagellin protein [Borrelia tanukii]
gi|1741963|dbj|BAA12718.1| flagellin protein [Borrelia tanukii]
Length = 292
Score = 97.1 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 2 NAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 61
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 62 NLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 121
Query: 137 DLGSSTASIAK 147
+ A+
Sbjct: 122 KSAAQNVKTAE 132
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/168 (8%), Positives = 44/168 (26%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ A T+ G + + A+ S N + +
Sbjct: 120 SNKSAAQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVAN 179
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ T + + + + ++ I+
Sbjct: 180 LFSGEGAQTAQAAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENA 239
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
I+ + +G+ +R+ ++ + + ++ ++ DA M E
Sbjct: 240 IRMVSDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEV 287
>gi|304392499|ref|ZP_07374439.1| flagellin B [Ahrensia sp. R2A130]
gi|303295129|gb|EFL89489.1| flagellin B [Ahrensia sp. R2A130]
Length = 314
Score = 97.1 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 78/160 (48%), Positives = 102/160 (63%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN ++M+A + L+ N LE Q R+S+GL+V DA+DNAAYWSIA M+SDN AL
Sbjct: 1 MSSILTNTASMTALKTLQATNNALETTQSRISTGLKVQDASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S V DA+GLG++K DIA G++ AIDV+ IK K+ A E G D IQ+E+ +LQ QL
Sbjct: 61 STVQDALGLGAAKSDIAYTGLNAAIDVVDQIKTKLVAAREPGVDKSKIQAELKELQGQLT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
IA SSF+GENWL D S T + +
Sbjct: 121 SIATSSSFSGENWLSIDHDSDTVTDTDLTKEIVSSFNRDA 160
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 71/313 (22%), Positives = 119/313 (38%)
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
S + A ++ N ++ T + + + ++K
Sbjct: 2 SSILTNTASMTALKTLQATNNALETTQSRISTGLKVQDASDNAAYWSIATTMRSDNKALS 61
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
Q + + D + T + L AA I L +
Sbjct: 62 TVQDALGLGAAKSDIAYTGLNAAIDVVDQIKTKLVAAREPGVDKSKIQAELKELQGQLTS 121
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
T+S SG S+ + + + + ++ + V +
Sbjct: 122 IATSSSFSGENWLSIDHDSDTVTDTDLTKEIVSSFNRDASGSVSVGTLEVNVTNVALFNA 181
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ S L + +++ + A ++ M+S +D + T+A
Sbjct: 182 NAASDGLLDVDFDIDTETVAGTKDQVSVANLDISLATITDADIDAMISGVDAAVSSMTSA 241
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
A +G+ SSRI +Q DF+ + DA+++GV LVDADM +ESTRLSALQTQQQL +Q+LSI
Sbjct: 242 AANLGATSSRIEMQNDFVGNLMDAIDRGVSALVDADMTAESTRLSALQTQQQLGIQSLSI 301
Query: 439 VNNSTARILSLFR 451
N ILSLFR
Sbjct: 302 ANQGAQSILSLFR 314
>gi|300870961|ref|YP_003785832.1| endoflagellar protein, FlaB2 [Brachyspira pilosicoli 95/1000]
gi|300688660|gb|ADK31331.1| endoflagellar protein, FlaB2 [Brachyspira pilosicoli 95/1000]
Length = 260
Score = 97.1 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 64/161 (39%), Gaps = 3/161 (1%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
++SG+R++ A D+A+ ++++ M++ L G S + + + ++ D+
Sbjct: 1 MASLASGMRINRAGDDASGLAVSEKMRTQIRGLRQAERNTQDGISFIQTTEGYLQESQDI 60
Query: 88 MSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ I+ D IQ E++QL ++ IA + FN N L A
Sbjct: 61 LQRIRELAVQSANGIYTDDDRMLIQVEVSQLVDEVNRIASQAQFNTLNMLTGRFADPNAG 120
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
A + F N + + + L ++ DGT
Sbjct: 121 GAPAASMWFHMGANMDERRRVYIGTMTAAALGLQNTADGTT 161
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 42/115 (36%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + L T T + + + +D + + +G+ +R+ L +
Sbjct: 146 MTAAALGLQNTADGTTLSISSIDKANSAIGLVDEALMKVSKQRSNLGAYQNRLELTAQGL 205
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + R+ D DMA S + + Q Q + L+ N T +L L +
Sbjct: 206 MIGYENTMASESRIRDTDMAEASVKFAKDQILSQTNLAMLAQANTMTQGVLRLVQ 260
>gi|229837423|ref|ZP_04457586.1| Flagellin protein flaA [Yersinia pestis Pestoides A]
gi|229705546|gb|EEO91556.1| Flagellin protein flaA [Yersinia pestis Pestoides A]
Length = 346
Score = 97.1 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 3/143 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN SA +A L + R+S+G R++ ADNAA I M+ +
Sbjct: 3 LSIHTNASAKTAINSLSNAGLANAKSSQRLSTGFRINSPADNAAGLQITNRMEKFLNSAG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
I + + IA G+++++ ++ +K T D ++IQ E ++L +
Sbjct: 63 QAKQNIQESIAMLQIADGGLAESVKTLNAMKKLATQAANDTNSAADREAIQKEFSELGKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSS 141
L++ + +N E
Sbjct: 123 LQNALNNTEYNSEKLFADGGKMR 145
>gi|27530974|dbj|BAC54116.1| phase-I flagellin [Salmonella enterica subsp. enterica serovar
Oranienburg]
Length = 116
Score = 97.1 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 3/115 (2%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+L +R+SSGLR++ A D+AA +IA S+ L+ S G S
Sbjct: 1 NKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQASRNANDGISIAQTT 60
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFN 129
+ +++ + + ++ SIQ EI Q ++ ++ + FN
Sbjct: 61 EGALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQFN 115
>gi|205356840|ref|ZP_03223593.1| flagellin [Campylobacter jejuni subsp. jejuni CG8421]
gi|205345284|gb|EDZ31934.1| flagellin [Campylobacter jejuni subsp. jejuni CG8421]
Length = 162
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + G +Q++I +L +L
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
+IA +SFNG+ L + + I
Sbjct: 125 NIANTTSFNGKQLLSGNFINQEFQIGA 151
>gi|48716092|dbj|BAD22834.1| flagellin [Campylobacter lari]
Length = 566
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 41/138 (29%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+V S T +I ++ +T I
Sbjct: 429 NLAFVTAFSVAFGFSAKGDGTSQFAAFAGTASIAAKDQQAGVTTLKGAMAVMDIAETAIT 488
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ ++I + I + + ++ + D D A+ES + Q
Sbjct: 489 NLDQIRADLGAVQNQITATLNNISVTQVNIKSAESNIRDVDFAAESANFAKFNILAQSGS 548
Query: 434 QALSIVNNSTARILSLFR 451
A+S N ++ L +
Sbjct: 549 YAMSQANAVQQNVMRLLQ 566
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 78/211 (36%), Gaps = 3/211 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNVASLNAQNNANLNSRALDSSLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 64 INNGNDALGILQTADKAMDEQLKILDTIKVKATQAAQDGQSTKTRNMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + + I + + ++ S
Sbjct: 124 NIANTTAFNGKQLLSGGFTNQSFQIGAQSNQTIQASIGATQSSKIGVTRFETGSMSHSSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ + + +
Sbjct: 184 VAQLTIKNYNGIDDFKFQPVVISSSVGTGMG 214
>gi|150388563|ref|YP_001318612.1| flagellar hook-associated protein 3 [Alkaliphilus metalliredigens
QYMF]
gi|149948425|gb|ABR46953.1| flagellar hook-associated protein 3 [Alkaliphilus metalliredigens
QYMF]
Length = 318
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 55/157 (35%), Gaps = 3/157 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N S Q L ++ Q + ++G R+ +D+ S + ++SD L
Sbjct: 3 ITNNMMISSMMQNLNGNLLRMDQKQLQATTGKRIHKPSDDPIGISRSLKLRSDIKELEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ S ++ + + + ++ ++K I++E+ +L++Q+
Sbjct: 63 KKNVDDTISWLETTELAVHNVGAAVERLRELTVQASNGVLTEDETKKIKAEVVELKNQII 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157
+ + + + A S + D
Sbjct: 123 SLGNTTYGGKYVFSGKKTDQKLFNDAGEYNVSNLSID 159
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + + ID + +IG+ +R+ L E+ I R + + ++ DAD
Sbjct: 224 AGDTAGLTDDLQNIDIYYDQYSTIRSEIGAKVNRMELVENRIVDDRLNLMELQSKIEDAD 283
Query: 415 MASESTRLSA 424
+A +L A
Sbjct: 284 VAEVYMQLMA 293
>gi|116254453|ref|YP_770291.1| flagellin protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115259101|emb|CAK10212.1| Probable flagellin protein. Similar to FlaA, FlaB, FlaC and FlaE
[Rhizobium leguminosarum bv. viciae 3841]
Length = 311
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 83/146 (56%), Positives = 105/146 (71%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN++AM+A Q LR +N +L+ Q RVSSG RV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNNAAMAALQTLRGVNDSLKDTQGRVSSGYRVEKAADNAAYWSIATTMRSDNMAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A + M A+DV+S IK KI A E+G D IQ E+ QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYSAMDSALDVVSDIKAKIVAATEKGVDKTKIQQELDQLQEQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA+ +SF+GENW+ G+ + +
Sbjct: 121 SIAQSASFSGENWVAGASGTKSVVSS 146
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 52/136 (38%), Positives = 78/136 (57%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
T + S + S V + + + + ++ ++ ++ +
Sbjct: 175 GMTSTGAIETSSGIIGTAFNGTYGSTVIVMASIYDLDITGFTQGQLDAALTGVELVLGAM 234
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
TAA +GSIS+RI LQE F+ + D+++ GVGRLVDADM ES++LSALQTQQQLA+Q+
Sbjct: 235 TAAGSALGSISTRIQLQETFVSGLHDSIDSGVGRLVDADMEEESSKLSALQTQQQLAIQS 294
Query: 436 LSIVNNSTARILSLFR 451
LSI N+S IL+LFR
Sbjct: 295 LSIANSSAQNILTLFR 310
>gi|218512315|ref|ZP_03509155.1| flagellin C protein [Rhizobium etli 8C-3]
Length = 134
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 81/133 (60%), Positives = 97/133 (72%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN+SAM+A Q LR IN NLE Q+ VS+G RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNNSAMAALQTLRSINSNLETTQNSVSTGYRVDTASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A M AIDV+ IK K+ A E G D +Q EI+QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYTAMDSAIDVVDEIKAKLVAATEDGVDKSKVQEEISQLQEQLM 120
Query: 121 DIARGSSFNGENW 133
IA+ +SF+GENW
Sbjct: 121 SIAQSASFSGENW 133
>gi|323527752|ref|YP_004229905.1| flagellin domain-containing protein [Burkholderia sp. CCGE1001]
gi|323384754|gb|ADX56845.1| flagellin domain protein [Burkholderia sp. CCGE1001]
Length = 390
Score = 96.7 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 56/381 (14%), Positives = 119/381 (31%), Gaps = 3/381 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +++ A Q L L R+SSG R++ AAD+AA +I+ M++ L
Sbjct: 1 MLGINSNINSLVAQQNLNGSQSALSQAITRLSSGKRINSAADDAAGLAISTRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
G S + A + +S + I+ +D ++Q E+ Q
Sbjct: 61 GQGVSNANDGVSLIQTASSALSSLTSSLQRIRTLAVQASTGTMSSSDQAALQKEVAQQIQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA +++NG N L G + +V + D + + ++ L
Sbjct: 121 EVNRIASQTTYNGTNILDGSAGIVGFQVGANVGQTINLDLSKSMSAASLGSGSLATGQLA 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + + +S T + + + A +
Sbjct: 181 GTISGLDIDASTGAAATAGATGAAITSINVLSDGHGGFTFTDQNGSAINATVAGSIFSTG 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
T A + I + A T + + S + + A + + +T +
Sbjct: 241 TATNATTTSPITTLTMSTGAYDTTNAALTTSITNATAQIGAVNASNTTVSSLDISTVSGA 300
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
++ + V N + + + + S IT
Sbjct: 301 NVAMVAIDNALTAVSNLQASLGAAQNRFSAIATSQQAEATDLSSAQSQITDANFAQETAN 360
Query: 358 KLAMEEMVSFIDTQIKCATAA 378
+ + + + A +
Sbjct: 361 LSKAQVLQQAGISVLAQANSQ 381
Score = 83.6 bits (204), Expect = 7e-14, Method: Composition-based stats.
Identities = 52/387 (13%), Positives = 110/387 (28%), Gaps = 6/387 (1%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ ++ +++ +S+AI +S+ K + D + + T++Q+Q+ + +G
Sbjct: 9 NSLVAQQNLNGSQSALSQAITRLSSGK-----RINSAADDAAGLAISTRMQTQINGLGQG 63
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S + SS S S + T +
Sbjct: 64 VSNANDGVSLIQTASSALSSLTSSLQRIRTLAVQASTGTMSSSDQAALQKEVAQQIQEVN 123
Query: 186 R-YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKG 244
R N ++ + TI+ K + + +
Sbjct: 124 RIASQTTYNGTNILDGSAGIVGFQVGANVGQTINLDLSKSMSAASLGSGSLATGQLAGTI 183
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
A A T S + + + + AT SI S T
Sbjct: 184 SGLDIDASTGAAATAGATGAAITSINVLSDGHGGFTFTDQNGSAINATVAGSIFSTGTAT 243
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
N+T T T ++ + ++ +
Sbjct: 244 NATTTSPITTLTMSTGAYDTTNAALTTSITNATAQIGAVNASNTTVSSLDISTVSGANVA 303
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ ID + + +G+ +R + + ++ DA+ A E+ LS
Sbjct: 304 MVAIDNALTAVSNLQASLGAAQNRFSAIATSQQAEATDLSSAQSQITDANFAQETANLSK 363
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ + L+ N+ ++L L +
Sbjct: 364 AQVLQQAGISVLAQANSQPQQVLKLLQ 390
>gi|262283901|gb|ACY40760.1| FlaG [Rhizobium leguminosarum bv. viciae]
Length = 311
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 83/146 (56%), Positives = 105/146 (71%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN++AM+A Q LR +N +L+ Q RVSSG RV AADNAAYWSIA M+SDN AL
Sbjct: 1 MTSILTNNAAMAALQTLRGVNDSLKDTQGRVSSGYRVDKAADNAAYWSIATTMRSDNMAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A + M A+DV+S IK KI A E+G D IQ E+ QLQ QL
Sbjct: 61 SAVSDALGLGAAKVDTAYSAMDSALDVVSDIKAKIVAATEKGVDKTKIQQELDQLQEQLL 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
IA+ +SF+GENW+ G+ + +
Sbjct: 121 SIAQSASFSGENWVAGASGTKSVVSS 146
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 52/136 (38%), Positives = 78/136 (57%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
T + S + S V + + + + ++ ++ ++ +
Sbjct: 175 GMTSTGAIETSSGIIGTAFNGTYGSTVIVMASIYDLDITGFTQGQLDAALTGVELVLGAM 234
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
TAA +GSIS+RI LQE F+ + D+++ GVGRLVDADM ES++LSALQTQQQLA+Q+
Sbjct: 235 TAAGSALGSISTRIQLQETFVSGLHDSIDSGVGRLVDADMEEESSKLSALQTQQQLAIQS 294
Query: 436 LSIVNNSTARILSLFR 451
LSI N+S IL+LFR
Sbjct: 295 LSIANSSAQNILTLFR 310
>gi|1902790|dbj|BAA19430.1| flagellin protein [Borrelia garinii]
Length = 292
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 2 NAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 61
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 62 NLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 121
Query: 137 DLGSSTASIAK 147
S A+
Sbjct: 122 KSASQNVRTAE 132
Score = 51.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/275 (8%), Positives = 68/275 (24%), Gaps = 1/275 (0%)
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ I D G I+ + + +++ + N + V
Sbjct: 14 SSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRM 73
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ + N DQA+ + +A T
Sbjct: 74 KELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSASQNVRTAEE 133
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ ++ + + V + VA + + ++
Sbjct: 134 LGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVANLFSGEGAQTAQAAP 193
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+ + + + ++ I+ I+ + +G+
Sbjct: 194 VQEGAQQEGAQQPAPATAPS-QGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGA 252
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+R+ ++ + + ++ ++ DA M E
Sbjct: 253 FQNRLESIKNSTEYAIENLKASYAQIKDATMTDEV 287
>gi|254294683|ref|YP_003060706.1| flagellin domain protein [Hirschia baltica ATCC 49814]
gi|254043214|gb|ACT60009.1| flagellin domain protein [Hirschia baltica ATCC 49814]
Length = 274
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTS+ TN+ AM A Q+L N LE Q R+++GL+VS A DN A ++IAQ M++D +
Sbjct: 1 MTSVNTNYGAMVALQQLNKTNSELETTQSRINTGLKVSSAKDNGAIFAIAQGMRADVASY 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQS 117
V ++ S VD A A D++ +K K + + L+
Sbjct: 61 GVVQQSLDRVGSTVDTAVAAGEAVSDLLVEMKEKALGAKDDTLTTEQRNAYDEDFKALRD 120
Query: 118 QLRDIARGSSFNGENWLRTDLG 139
Q+ I + FNG N L++
Sbjct: 121 QITTIVDNAEFNGANLLKSGAS 142
Score = 84.4 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 57/97 (58%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
N ++ ++T I AA ++G+ S + F+ + DA+E G+G LVDAD
Sbjct: 178 INTVTKAGAAITALETSIDNVNAALARLGTGSKALETHSTFVTKLSDAMEAGIGNLVDAD 237
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+A ES +L +LQT+QQL VQALSI N S+ LS FR
Sbjct: 238 LAKESAKLQSLQTKQQLGVQALSIANQSSGLALSFFR 274
>gi|119947191|ref|YP_944871.1| flagellin domain-containing protein [Psychromonas ingrahamii 37]
gi|119865795|gb|ABM05272.1| flagellin domain protein [Psychromonas ingrahamii 37]
Length = 341
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 42/338 (12%), Positives = 104/338 (30%), Gaps = 3/338 (0%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN++ + L N + +R+S+G R++ A+D+AA I+ +++ +
Sbjct: 3 LSIQTNYANLVGQNTLNKTNADFNTSLERLSTGYRINSASDDAAGLQISNRLEAQGRGMG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G +S++ A+ M + ++ + + T D ++++E T L ++
Sbjct: 63 VAMRNAGDATSQMQTAEGAMEEMTNIAYRMSDLATQSANGTASDDDRTAMEAEFTSLAAE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L + ++ G+ L G +G+ + T + T L +
Sbjct: 123 LGSLMENTNMGGQKLLDKTDGVFATGAINYQVGNTSAEKLSVDISTELTTVTTSITALSE 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + ++ + + A+G + A
Sbjct: 183 GAAFAAAYNTAYQTAYDTEMAGAGVVATAKANGVAAGNTAGAADADAGAYATMAAVETKG 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ + + S + T + + A +
Sbjct: 243 LTLTSQKGATNAIDTLSGFINDIGATRSQLGANINRLDHTMANLASMSENTAAAKSRIMD 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+D +S ++K ++ L +
Sbjct: 303 TDMAAESSAMSKNQMLMQAGAQVLSSTKMVPQLAMSLM 340
Score = 75.5 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 36/94 (38%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + + I A ++G+ +R+ + M + R++D DM
Sbjct: 246 TSQKGATNAIDTLSGFINDIGATRSQLGANINRLDHTMANLASMSENTAAAKSRIMDTDM 305
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
A+ES+ +S Q Q Q LS +SL
Sbjct: 306 AAESSAMSKNQMLMQAGAQVLSSTKMVPQLAMSL 339
>gi|1304029|dbj|BAA12100.1| flagellin protein [Borrelia andersonii]
gi|1304031|dbj|BAA12101.1| flagellin protein [Borrelia andersonii]
gi|1304033|dbj|BAA12102.1| flagellin protein [Borrelia andersonii]
Length = 292
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 2 NAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 61
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 62 NLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 121
Query: 137 DLGSSTASIAK 147
S A+
Sbjct: 122 KSASQNVRAAE 132
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/275 (8%), Positives = 67/275 (24%), Gaps = 1/275 (0%)
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ I D G I+ + + +++ + N + V
Sbjct: 14 SSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRM 73
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ + N DQA+ + +A
Sbjct: 74 KELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSASQNVRAAEE 133
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ ++ + + V + VA + + ++
Sbjct: 134 LGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVANLFSGEGAQTAQAAP 193
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+ + + + ++ I+ I+ + +G+
Sbjct: 194 VQEGIQQEGAQQPAPATAPS-QGGVNSPVNVTTTVDANTSLAKIENAIRMVSDQRANLGA 252
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+R+ ++ + + ++ ++ DA M E
Sbjct: 253 FQNRLESIKNSTEYAIENLKASYAQIKDATMTDEV 287
>gi|157101684|gb|ABV23552.1| flagellin C [Bacillus thuringiensis serovar kurstaki]
Length = 282
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 38/227 (16%), Positives = 80/227 (35%), Gaps = 3/227 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKGGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 68 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEID 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++FNG +L T ++ + + ITT T +
Sbjct: 128 HIADKTNFNGNAFLSGGGKDITIQLSDASNDTMKITAIDTKAITTATLATPTATGADKAL 187
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+ + + I+ + ++ +
Sbjct: 188 NAASAPAQITALDTAIQEIADARATSGSQLNRLDHNLNNVTSQATNM 234
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 45/130 (34%)
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
S + + + TL D + ++ +DT I+ A
Sbjct: 153 SDASNDTMKITAIDTKAITTATLATPTATGADKALNAASAPAQITALDTAIQEIADARAT 212
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
GS +R+ + + + ++ DADMA E + ++ + + + LS N
Sbjct: 213 SGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKILNEAGISMLSQANQ 272
Query: 442 STARILSLFR 451
+ + L +
Sbjct: 273 TPQMVSKLLQ 282
>gi|153844553|ref|ZP_01993670.1| polar flagellin E [Vibrio parahaemolyticus AQ3810]
gi|149745212|gb|EDM56463.1| polar flagellin E [Vibrio parahaemolyticus AQ3810]
Length = 124
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 38/101 (37%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
+ + + + +D IK + +IG +R+ D + + +V + GR
Sbjct: 23 VDDLDMSTVGGAQLAIGVVDAAIKYVDSHRSEIGGFQNRVSGTIDNLNTINRSVSESKGR 82
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ D D A EST + Q Q L+ + L L
Sbjct: 83 IRDTDFARESTVMVRSQVLQDATTALLAQAKQRPSSALGLL 123
>gi|224502005|ref|ZP_03670312.1| flagellin [Listeria monocytogenes FSL R2-561]
gi|255029922|ref|ZP_05301873.1| flagellin [Listeria monocytogenes LO28]
gi|53854950|gb|AAU95795.1| flagellin [Listeria monocytogenes]
Length = 287
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 60/146 (41%), Gaps = 3/146 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN ++ + LR N + Q+R++SG R++ + D+AA ++ M + L A
Sbjct: 3 VNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S +G + A + +S ++ ++ D K +E L +L
Sbjct: 63 SKNSSMGIDLLQTADSALSSMSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKELD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
+A +++N L + ++
Sbjct: 123 HVADTTNYNNIKLLDQTAIGAATQVS 148
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 38/96 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ++ ID I + +G+ SR+ + A + + DAD
Sbjct: 190 VADADSSQQATEAIDELINNISNGRALLGAGMSRLSYNVSNVNNQSIATKASASSIEDAD 249
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA+E + ++ + Q ++ LS N + + L
Sbjct: 250 MAAEMSEMTKYKILTQTSISMLSQANQTPQMLTQLI 285
>gi|89075503|ref|ZP_01161914.1| flagellar hook-associated protein [Photobacterium sp. SKA34]
gi|89048775|gb|EAR54346.1| flagellar hook-associated protein [Photobacterium sp. SKA34]
Length = 411
Score = 96.7 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 49/450 (10%), Positives = 122/450 (27%), Gaps = 49/450 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T S + L + +++S+G RV A D+ Q + +
Sbjct: 5 VSTASQYQSLTSNLMRKQGEVNESNNQLSTGKRVETAGDDPVSSVTIQNYRQQLTQIDQY 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI---TAGVERGTDSKSIQSEITQLQSQLR 120
+I + ++++ + ++ ++ D + K K+ G D + + E+T L+ L
Sbjct: 65 KSSITMANNRLGVMESSIAGVEDNLDATKQKVLRMINGAMASNDRTAFKDELTSLRDGLL 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++A +G + + + + + D+ ++ D
Sbjct: 125 ELANSRDESGNYVFAGNQMDTQPFVKGTDDKMNYQGDSQSRYAQIDKSVEVKTSLPGDQL 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
F + +
Sbjct: 185 -----------------------------------------FTSIPNPYGDFRPDFSDLS 203
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + A S + S + + + +
Sbjct: 204 SGSKLHVLSATTSDFTKAQPIDIAFSEALVTQPDGSEKTVMQYKLSLDGKEVVADQDYDP 263
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T A + +D + ++I+ S+ T + +
Sbjct: 264 EKGIQYTAANGSSVSITLDDVEVGDKLTLNPAQKINIFDSLQDAIDNAEKPTSSAAAEAT 323
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ ++ ID + ++G+I ++ Q++ + L D D +
Sbjct: 324 LQRVIDDIDGSFLHVSQRRSEVGTIMQQVERQQEQHLDFELTLNSAQSGLEDLDYSKAIM 383
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
++ Q + A S LSLF
Sbjct: 384 EMNQQMMALQASQSAFSKTKQ-----LSLF 408
>gi|148927043|ref|ZP_01810715.1| flagellin [Campylobacter jejuni subsp. jejuni CG8486]
gi|145844976|gb|EDK22077.1| flagellin [Campylobacter jejuni subsp. jejuni CG8486]
Length = 537
Score = 96.3 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T IGS+ +++ + + I + + V+ + D D
Sbjct: 441 VTTLKGAMAVMDIAETATTNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVD 500
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A+S N +L L +
Sbjct: 501 FAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 537
Score = 86.3 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 77/247 (31%), Gaps = 3/247 (1%)
Query: 36 RVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI 95
R++ AAD+A+ +IA ++S L + + A M + + ++ TIK K
Sbjct: 1 RINSAADDASGMAIADSLRSQAATLGQAINNGNDAIGILQTADKAMDEQLKILDTIKTKA 60
Query: 96 TAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGS 152
T + G +Q++I +L +L +IA +SFNG+ L + + I S +
Sbjct: 61 TQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNFINQEFQIGASSNQT 120
Query: 153 FIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYD 212
+ + S + + + + +
Sbjct: 121 IKATIGATQSSKIGLTRFETGGRISSSGEVQFTLKNYNGIDDFKFQKVVISTSVGTGLGA 180
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ I+ K + ++ +A + + G S
Sbjct: 181 LAEEINKSADKTGVRATFTVETRGMAAVRAGTTSNDFAINGVTIGQVDYKDGDGNGALVS 240
Query: 273 VAASATY 279
S
Sbjct: 241 AINSVKD 247
>gi|303240170|ref|ZP_07326690.1| flagellar hook-associated protein 3 [Acetivibrio cellulolyticus
CD2]
gi|302592261|gb|EFL61989.1| flagellar hook-associated protein 3 [Acetivibrio cellulolyticus
CD2]
Length = 302
Score = 96.3 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 50/125 (40%), Gaps = 3/125 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + + ++ Q+++++G +++ +D+ + A +++D +
Sbjct: 3 ITNNMLVNNMINNIGSNLTRMDKYQEKLATGKKITVPSDDPVVAARALKLRTDVSQIKQH 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLR 120
+ S ++I ++ ++ D++ + G Q E+ QL++QL
Sbjct: 63 KTNVNDAMSWLEITESALTNVGDILQRARELAVQGSSSSATKDDTQKIEQEVAQLRNQLI 122
Query: 121 DIARG 125
+
Sbjct: 123 QVGNS 127
Score = 44.0 bits (101), Expect = 0.052, Method: Composition-based stats.
Identities = 12/173 (6%), Positives = 39/173 (22%)
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
++ + + A + + +
Sbjct: 98 SSSSATKDDTQKIEQEVAQLRNQLIQVGNSTYAGRYVFSGFKTDTKLINDDGTFAIDVDN 157
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
++ ++ T D + ++ ++ +
Sbjct: 158 TESIIYEIGVSDNININVTGGDLFNAGGVATTGSTGQLVQTFDKYISSLNSGNHELIGNS 217
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
++ +D I +G+ +R+ L + + K + D D A
Sbjct: 218 ITDLDNNINNLLRIRAGVGARYNRLELTSNRLDNDEINFTKLMSENEDVDQAE 270
>gi|302383512|ref|YP_003819335.1| flagellin domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302194140|gb|ADL01712.1| flagellin domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 275
Score = 96.3 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN A+ A Q L N L Q R+++G +V++A DN A W+IAQ ++D GAL A
Sbjct: 4 SVNTNLGALIALQNLNATNVELSATQSRINTGKKVANAKDNGAIWAIAQGQRADIGALGA 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
V ++ G S VD+ A D++ +K K A + + ++ + ++ Q+
Sbjct: 64 VKGSLDRGVSAVDVGLAAGESISDLLIQLKEKALAATDKSLSTSSRSALNEDFKAIRDQI 123
Query: 120 RDIARGSSFNGENWLRTDLG 139
+A + FNG N L+T
Sbjct: 124 TTVANNADFNGINLLKTGAT 143
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 54/89 (60%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ ++ I + A ++G+ S + F+ + DA+E GVG LVDAD+A ES +L
Sbjct: 187 TALGLVNASIDKVSGALARLGTKSKALETHRTFVGKLTDALESGVGNLVDADLAKESAKL 246
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+LQT+QQL VQAL I N S +LSLFR
Sbjct: 247 QSLQTKQQLGVQALGIANQSPQVLLSLFR 275
>gi|33311221|gb|AAQ03611.1| flagellin [Borrelia afzelii]
Length = 128
Score = 96.3 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 3/127 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 2 NAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 61
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 62 NLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 121
Query: 137 DLGSSTA 143
S
Sbjct: 122 KSASQNV 128
>gi|170758840|ref|YP_001788013.1| flagellin [Clostridium botulinum A3 str. Loch Maree]
gi|169405829|gb|ACA54240.1| flagellin [Clostridium botulinum A3 str. Loch Maree]
Length = 272
Score = 96.3 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 71/201 (35%), Gaps = 4/201 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + + + ++ + E V ++VSSG R++ A+D+A+ +I++ K+ LS
Sbjct: 3 IN-NANVLGSFNRITKQKFKNESVVEKVSSGKRINRASDDASGITISESFKAQVRGLSQA 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
G S + A + + +K D K E +L++ +
Sbjct: 62 GRNTQDGISMLQTVDAALDDISKHLYRMKEIAVKAANDTLTDEDRKLAHEEFKELKNSID 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I+ + FN L+ D + + ++ + I ++
Sbjct: 122 EISDKTEFNKIKLLKEDKDLNIQIKDNPYVTYTVKLQAVNTERMDIKDSTVDTFQDASNA 181
Query: 181 TDGTERYGLLDRNHKIKVEPQ 201
++ +++
Sbjct: 182 ISSIDKALNELIKYRVNTGND 202
Score = 55.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 28/92 (30%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +S ID + G+ + + + + + R+ D+D
Sbjct: 172 VDTFQDASNAISSIDKALNELIKYRVNTGNDYNNLCQAFNDSSNSELNLTASLSRVEDSD 231
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARI 446
MAS L + L V +T I
Sbjct: 232 MASSMMNLIKGNVLSEYNRSMLVAVRETTQGI 263
>gi|48716094|dbj|BAD22835.1| flagellin [Campylobacter lari]
Length = 566
Score = 96.3 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 21/181 (11%), Positives = 48/181 (26%)
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
T+ + + + + A +V S
Sbjct: 386 GGGKMVVTFGTLASYMGSDGSGMSAGSGYSVNSGKNMSALYEGNLAFVTAFSVAFGFSAK 445
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
T +I ++ +T I +G++ ++I
Sbjct: 446 GDGTSQFAAFAGTASIAAKDQQAGVTTLKGAMAVMDIAETAITNLDQIRADLGAVQNQIT 505
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ I + + ++ + D D A+ES + Q A+S N ++ L
Sbjct: 506 ATLNNISVTQVNIKSAESNIRDVDFAAESANFAKFNILAQSGSYAMSQANAVQQNVMRLL 565
Query: 451 R 451
+
Sbjct: 566 Q 566
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 78/211 (36%), Gaps = 3/211 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNVASLNAQNNANLNSRALDSSLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 64 INNGNDALGILQTADKAMDEQLKILDTIKVKATQAAQDGQSTKTRNMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + + I + + ++ S
Sbjct: 124 NIANTTAFNGKQLLSGGFTNQSFQIGAQSNQTIQASIGATQSSKIGVTRFETGSMSHSSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ + + +
Sbjct: 184 VAQLTIKNYNGIDDFKFQPVVISSSVGTGMG 214
>gi|14861498|gb|AAK73699.1| flagellin A [Campylobacter jejuni]
Length = 194
Score = 96.3 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 73/193 (37%), Gaps = 3/193 (1%)
Query: 9 SAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
+A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 1 AALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAISNGN 60
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARG 125
+ A M + + ++ TIK K T + G +Q++I +L +L +IA
Sbjct: 61 DALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANT 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+SFNG+ L + + I S + + + S
Sbjct: 121 TSFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGGRISSSGEVQFT 180
Query: 186 RYGLLDRNHKIKV 198
+
Sbjct: 181 LKNYNGIDDFKFQ 193
>gi|78045209|ref|YP_359819.1| flagellar hook-associated protein 3 [Carboxydothermus
hydrogenoformans Z-2901]
gi|77997324|gb|ABB16223.1| flagellar hook-associated protein 3 [Carboxydothermus
hydrogenoformans Z-2901]
Length = 287
Score = 96.3 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 59/191 (30%), Gaps = 4/191 (2%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
L ++E Q +S+G ++ +D+ A +SD I G +
Sbjct: 13 LYNLHRTLADMEKSQQMLSNGKALTKPSDDPVKLLRAMKYRSDITQGEQYQRNIEDGLNW 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIARGSSFNG 130
++ A +++ +++ +K G +S+ S EI Q++ Q+ IA + F G
Sbjct: 73 LNTTDAALNELTNLLQRVKELTVYGANGALPQESLNSIAEEIKQIKEQVGVIA-NTQFAG 131
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+ + G+ + + + + L
Sbjct: 132 KYIFGGTEVEKQPWDGSNWQGNSSGIYFEIGSNIKVQVNTVGLPLFTNVMQTLDQIINHL 191
Query: 191 DRNHKIKVEPQ 201
V
Sbjct: 192 TAGDVAAVSSD 202
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 15/140 (10%), Positives = 44/140 (31%), Gaps = 1/140 (0%)
Query: 287 IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI 346
+ K + + + + ++ V +
Sbjct: 125 ANTQFAGKYIFGGTEVEKQPWDGSNWQGNSSGIYFEIGSNIKVQVNTVGLPLFTNVMQTL 184
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ N + A+ + +D + A +G+ ++R+ L ++ + + ++
Sbjct: 185 DQIINHLTAGDVAAVSSDLGSLDNNLNTVLAVRADVGARTNRLELMQNRLLAQLETEKEL 244
Query: 407 VGRLVDADMASESTRLSALQ 426
+ + DAD+A+ L Q
Sbjct: 245 LSKTEDADIAATIIDL-KNQ 263
>gi|283784096|ref|YP_003363961.1| lateral flagellar flagellin [Citrobacter rodentium ICC168]
gi|282947550|emb|CBG87103.1| lateral flagellar flagellin [Citrobacter rodentium ICC168]
Length = 301
Score = 96.3 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 39/273 (14%), Positives = 93/273 (34%), Gaps = 3/273 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI TN+++M+A + N +L +R+++G R++ +AD+AA IA + + + +
Sbjct: 1 MLSINTNNASMAAVNAINKSNSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQS 117
I ++ + A + + DV+ +K+ T + ++Q E +L
Sbjct: 61 GVALSNINDATAMLQTADSMFDEMSDVLGRMKDLATQAANGTYNDDDLQAMQDEFDELGQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ D+ + +++ G N S+T + T+D T++
Sbjct: 121 QMSDMLQNTTYGGTNLFGVSGTSNTGEAGLFQSAVTFQVGAESSDTMTVDISSQLGTLVD 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
D S I ++ + ++ + + +
Sbjct: 181 DLSAVSASFVADQAGGTTISGGTELTASGSANSMISTISTAMDDVSKIQSKLGASINRLN 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
+ + + + +
Sbjct: 241 DTANNLTSMQDNTEVAIGNIMDTDYATEASNMT 273
Score = 69.8 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 36/295 (12%), Positives = 83/295 (28%)
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
+N + + R + K L + A
Sbjct: 7 NNASMAAVNAINKSNSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSN 66
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
I+ L T + + ++
Sbjct: 67 INDATAMLQTADSMFDEMSDVLGRMKDLATQAANGTYNDDDLQAMQDEFDELGQQMSDML 126
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
G + V T+ + ++ S+ L + D +
Sbjct: 127 QNTTYGGTNLFGVSGTSNTGEAGLFQSAVTFQVGAESSDTMTVDISSQLGTLVDDLSAVS 186
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + T + + M+S I T + + K+G+ +R++ + +
Sbjct: 187 ASFVADQAGGTTISGGTELTASGSANSMISTISTAMDDVSKIQSKLGASINRLNDTANNL 246
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
M+D E +G ++D D A+E++ ++ Q Q + L N+ ++ + SL +
Sbjct: 247 TSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVSSLLQ 301
>gi|242277991|ref|YP_002990120.1| flagellar hook-associated protein 3 [Desulfovibrio salexigens DSM
2638]
gi|242120885|gb|ACS78581.1| flagellar hook-associated protein 3 [Desulfovibrio salexigens DSM
2638]
Length = 496
Score = 96.3 bits (237), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/477 (10%), Positives = 106/477 (22%), Gaps = 49/477 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN + L + R S+ RV +D+ A +S
Sbjct: 3 ISTNQIFNMSLYNLNSSMSRMAEANMRNSAQKRVLVPSDDPAAMGGIINCRSFGLETKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I SS + +A + + + IK ++ +S L+ L ++
Sbjct: 63 IKNIKTASSWLSLADGVLQQTSTDIGRIKELAEQAATGTLTAEQRRSIGQNLRGILGNLL 122
Query: 124 R--GSSFNGENWLRT------------DLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
+ F G++ ++ + + + V +
Sbjct: 123 NKSNTEFGGKSIFSGHKLDSNAYEETLHATTTDPDLPAGSVVAVKGASESSVDVRFTSGG 182
Query: 170 LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
+ + + + E + + T T K
Sbjct: 183 TVGTDTITYKYSSDGGKTWKNGTLNPGDTELALGPATVELKNGTAVTEHTDKGGTRLIVR 242
Query: 230 AWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
L+ D + + + + D
Sbjct: 243 PALEYKGDDNDDLNVATYGDTQVNTKADGKFHSDVLVQIDKNGDVNTPPITYSYSLDNGA 302
Query: 290 RATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRH 349
N + ++ R + ++ +
Sbjct: 303 TWVHSNVSADTRLEVPGGSLTLSPGAGTTFSKGDQFVIRPNTADLRLDISQSRSIRVNNV 362
Query: 350 A-----------------------------------NTDAYNEKLAMEEMVSFIDTQIKC 374
N+K + E V+ + +
Sbjct: 363 GKEIFGGIYTKPGASNPTPSPDDNNSNLFETLGKLIGYVETNDKKGIGECVAELKKVHEH 422
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
A +IG+ +R E ++ +D RL DAD+ L + +
Sbjct: 423 VEMKAAEIGARMNRAASAEKLAEIRKDNNTALQSRLEDADLGELLNELKQSELIYEA 479
>gi|222147581|ref|YP_002548538.1| flagella associated protein [Agrobacterium vitis S4]
gi|221734569|gb|ACM35532.1| flagella associated protein [Agrobacterium vitis S4]
Length = 320
Score = 96.3 bits (237), Expect = 1e-17, Method: Composition-based stats.
Identities = 74/144 (51%), Positives = 101/144 (70%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTS++TN +A+SA LR I+ ++ Q+RVSSG +V +A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSLMTNTAAISALSTLRSISDDMNSTQNRVSSGYKVENASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV DAIGLGS+K D A GM AIDV++ IK K+ A E G D + I E+ +L++QL
Sbjct: 61 GAVEDAIGLGSAKTDTAYTGMKSAIDVVTDIKAKLVAAREPGVDKEKINKELVELKNQLS 120
Query: 121 DIARGSSFNGENWLRTDLGSSTAS 144
+A+ +SFNGENWL + S+ +
Sbjct: 121 SVAKSASFNGENWLYDNSDSTGTT 144
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 69/319 (21%), Positives = 114/319 (35%), Gaps = 2/319 (0%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ S S +S+ N ++ D ++T ++ L
Sbjct: 4 LMTNTAAISALSTLRSISDDMNSTQNRVSSGYKVENASDNAAYWSIATTMRSDNKALGAV 63
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
I + + A ++ K KL + + + +
Sbjct: 64 EDAIGLGSAKTDTAYTGMKSAIDVVTDIKAKLVAAREPGVDKEKINKELVELKNQLSSVA 123
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+A + + + GN T T+ +
Sbjct: 124 KSASFNGENWLYDNSDSTGTTQEMVGSFVRGNDGNVSIKTITFDTTNSILINDEAGDGGL 183
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
T V T + + + + ++ MVS +D +
Sbjct: 184 LTKGTVATYAYGTTT--TTASYYLISSVAGNTSSASEVTLTSSTTDDEIDGMVSAVDKML 241
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
T AA IG+ +SR+ LQ+ FIK + D ++ GVGRLVDADM EST+L ALQTQQQL
Sbjct: 242 SNMTDAASTIGATTSRLELQDTFIKNLSDTIDTGVGRLVDADMNEESTKLKALQTQQQLG 301
Query: 433 VQALSIVNNSTARILSLFR 451
+Q+LSI N+++ ILSLF+
Sbjct: 302 IQSLSIANSNSESILSLFK 320
>gi|302383745|ref|YP_003819568.1| flagellin domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302194373|gb|ADL01945.1| flagellin domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 277
Score = 96.3 bits (237), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN A+ A Q L+ N L VQ R+++G +V+ A DN A W+IAQ +S+ AL A
Sbjct: 5 SVNTNSGALVALQNLQSTNSELATVQSRINTGKKVNSAKDNGAVWAIAQGQRSEVNALGA 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
V D++ GSS VD++ A D++ +K K + + ++ + ++ Q+
Sbjct: 65 VKDSLARGSSAVDVSIAAGESVSDLLLQLKEKALSATDKSLTTAARTALNEDFKAIRDQI 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTA 143
+ + FNG N L G+
Sbjct: 125 TTVVTNAKFNGVNLLDNSTGTGGY 148
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 57/89 (64%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ ++ I +A+ ++G+ + + F+ + DA+E G+G LVDAD+A ES RL
Sbjct: 189 TALGLVNASIDKVSASLARLGTGAKALDTHSTFVGKLSDALENGIGNLVDADLAKESARL 248
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+LQT+QQL VQALSI N S++ +L LFR
Sbjct: 249 QSLQTKQQLGVQALSIANQSSSILLGLFR 277
>gi|219670202|ref|YP_002460637.1| flagellar hook-associated protein 3 [Desulfitobacterium hafniense
DCB-2]
gi|219540462|gb|ACL22201.1| flagellar hook-associated protein 3 [Desulfitobacterium hafniense
DCB-2]
Length = 327
Score = 96.3 bits (237), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/209 (12%), Positives = 66/209 (31%), Gaps = 4/209 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + + L ++ +Q+++S+G +++ +D+ + KS+ L+ +
Sbjct: 3 ISNNMLSRNLLLNLWAAQGRMDKLQNQMSTGQKINRPSDDPVGTENSLRFKSNISYLNQL 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG----TDSKSIQSEITQLQSQL 119
G + +D M + ++ K + D K I EI Q++ +
Sbjct: 63 KANAKEGIAYMDTTDDVMGEMSLMIQRAKELAVHAMNTSTVNDEDRKKIAIEIDQIREHV 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++A + T A GS +I+ ++ +
Sbjct: 123 IELANTKVGTKYIFGGTANVEPFPKGATGWQGSDDTKKFQVGGDLSIEVSVNGHDLFGAG 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ ++ + +
Sbjct: 183 WEYTPKTPATDPPTYEYQETGASGIAMFD 211
Score = 50.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/315 (7%), Positives = 75/315 (23%), Gaps = 3/315 (0%)
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ + + + + T + + +
Sbjct: 2 RISNNMLSRNLLLNLWAAQGRMDKLQNQMSTGQKINRPSDDPVGTENSLRFKSNISYLNQ 61
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ G+ + V ++ I + A ++T ++
Sbjct: 62 LKANAKEGIAYMDTTDDVMGEMSLMIQRAKELAVHAMNTSTVNDEDRKKIAIEIDQIREH 121
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ T N G+ + ++G + + +
Sbjct: 122 VIELANTKVGTKYIFGGTANVEPFPKGATGWQGSDDTKKFQVGGDLSIEVSVNGHDLFGA 181
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
Y + + D + + + E+
Sbjct: 182 GWEYTPKTPATDPPTYEYQETGASGIAMFDTLA---QLSKALNESNINGVDDGTGTEEDG 238
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+E ++S ++ Q + ++G+ +R+ + + + ++ AD+A
Sbjct: 239 VEVLLSKLELQADHISDVRAQLGARQNRMDSVYTQLDSTSANLGDSLANVLYADIAETLV 298
Query: 421 RLSALQTQQQLAVQA 435
+ Q A+
Sbjct: 299 NFKTQDSIYQAALSV 313
>gi|331269310|ref|YP_004395802.1| flagellin [Clostridium botulinum BKT015925]
gi|329125860|gb|AEB75805.1| flagellin [Clostridium botulinum BKT015925]
Length = 271
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ + +R+SSG +++ + +N ++++ M+ L G S + A +
Sbjct: 15 NSQSMYMNRISSGFKINSSKENPNGLALSEKMRVQIRGLQIAQRNAQDGMSMIQSADGAL 74
Query: 82 SKAIDVMSTIKNKITAG--VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
++ I+ D K+++SEI Q+ + D + S FNG++
Sbjct: 75 EGVQSMLIRIRELSIQAGGATNENDRKALKSEINQMIEGIDDTLKHSDFNGKSI 128
Score = 84.4 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 34/96 (35%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + + +D+ + + GK G++ +R + + + D + ++ D D+A
Sbjct: 174 DSDTIGNYLEVVDSAVDKISDIRGKYGALCNRFEGTYNEVNELHDTIVGTESKIRDTDIA 233
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
L+ + L N L + G
Sbjct: 234 EAMMNLARDNILVEAGQAMLVQSNKFPQDALRVLEG 269
>gi|300928955|ref|ZP_07144458.1| bacterial flagellin [Escherichia coli MS 187-1]
gi|300463063|gb|EFK26556.1| bacterial flagellin [Escherichia coli MS 187-1]
Length = 103
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 40/93 (43%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + + +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 11 ATADPLKALDAAIAKVDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEV 70
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 71 SNMSKAQIIQQAGNSVLSKANQVPQQVLSLLQG 103
>gi|301029376|ref|ZP_07192471.1| bacterial flagellin [Escherichia coli MS 196-1]
gi|299877723|gb|EFI85934.1| bacterial flagellin [Escherichia coli MS 196-1]
Length = 101
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 40/93 (43%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A + + +D I +G++ +R+ + + + R+ DAD A+E
Sbjct: 9 ATADPLKALDAAIAKVDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEV 68
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ +S Q QQ LS N ++LSL +G
Sbjct: 69 SNMSKAQIIQQAGNSVLSKANQVPQQVLSLLQG 101
>gi|300114792|ref|YP_003761367.1| flagellar hook-associated protein 3 [Nitrosococcus watsonii C-113]
gi|299540729|gb|ADJ29046.1| flagellar hook-associated protein 3 [Nitrosococcus watsonii C-113]
Length = 400
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/437 (10%), Positives = 114/437 (26%), Gaps = 53/437 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ + + + + Q +++SG R+ AD+ + ++ +G +
Sbjct: 3 ISTSLFQQQSIEGMLRQQTQVSKTQRQIASGERMQTPADDPVAAARLLEVREASGRTAQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
L ++++ + ++ +V+ ++ + I E+ Q ++L
Sbjct: 63 QTNADLATARLSQEENALAGVNNVLQGVRELAVQANNGAQNNENRAIIAQEVRQRLNELV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A +GE G + I S+ D ++ + +
Sbjct: 123 GLANSQDASGEYLFAGAKGRTQPFIQAGGGVSYQGDQAQRLISIGPSAQVADSHSGSEVF 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
E G+ + + T +F AT +
Sbjct: 183 LAIREGNGVFATEANPVNRGSGVIAPGSANGAFIPGNYTLQFSQATPDDPLTYQVLDSQH 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A
Sbjct: 243 TVVANGDFASGEEIAFGGAQ---------------------------------------- 262
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T D +S TL + + + + L + T
Sbjct: 263 ----------ASITGVPADGDSFTLRASAHRDMFTIAQHFIEALERPINDTTSQARFHND 312
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
M + ++ +D + + G+ + + + + + + L D D+A
Sbjct: 313 MNKTLTDLDQAMGKVLEVRAETGARLNAVDRERQVNEETSLQLAREQSSLNDLDLAEAIG 372
Query: 421 RLSALQTQQQLAVQALS 437
RL+ T + A + +
Sbjct: 373 RLNQQLTGLEAAQRTYA 389
>gi|196033674|ref|ZP_03101086.1| flagellin [Bacillus cereus W]
gi|195994108|gb|EDX58064.1| flagellin [Bacillus cereus W]
Length = 266
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 57/177 (32%), Gaps = 3/177 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+A Q + + + + +G +++ A+DN A +I M + ++
Sbjct: 3 IGTNFLSMNARQSFYENEKRMNIAMEHFVTGKKLNHASDNPANVAIMTRMHARASSMRVA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
S + A+A + +++ +++ + S+ E L+ Q+
Sbjct: 63 IRNNEDAISMLRTAEAALQTVTNILQRMRDLAIQSANGTNSNKNRDSLNKEFQSLKKQIG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
I + FN + T + Q +
Sbjct: 123 YIGETTEFNDLSVFDGQNRPVTLDDIGHTVNITKHIPPSPTQHDIKISTEQDARAAI 179
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 24/243 (9%), Positives = 66/243 (27%)
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
++ KK A+ + A + +A + A + T +
Sbjct: 23 MNIAMEHFVTGKKLNHASDNPANVAIMTRMHARASSMRVAIRNNEDAISMLRTAEAALQT 82
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + + + T + + +
Sbjct: 83 VTNILQRMRDLAIQSANGTNSNKNRDSLNKEFQSLKKQIGYIGETTEFNDLSVFDGQNRP 142
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
L + + + + + + + I+ ++ + G+ +R
Sbjct: 143 VTLDDIGHTVNITKHIPPSPTQHDIKISTEQDARAAIRKIEEALQNVSLHRADFGATMNR 202
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + R A+ R+ DADMA E + + ++ + +S N +
Sbjct: 203 LQFNIENLNSQRMALTDASSRIEDADMAQEMSDFLRFKLLTEVVLSMVSQANQIPQMVSK 262
Query: 449 LFR 451
L +
Sbjct: 263 LLQ 265
>gi|48716114|dbj|BAD22845.1| flagellin [Campylobacter lari]
Length = 565
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 42/137 (30%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ S + + T +I ++ +T I
Sbjct: 429 AFVTAFSVAFGFSVGNGDGATQFAAFLNTASIAAKDQQAGVTTLKGAMAVMDIAETAITN 488
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+G++ ++I + I + + ++ + D D A+ES + Q
Sbjct: 489 LDQIRADLGAVQNQITRTLNNISVTQVNIKSAESNIRDVDFAAESANFAKFNILAQSGSY 548
Query: 435 ALSIVNNSTARILSLFR 451
A+S N ++ L +
Sbjct: 549 AMSQANAVQQNVMRLLQ 565
Score = 86.3 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 79/211 (37%), Gaps = 3/211 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNVASLNAQNNANLNSRALDSSLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 64 INNGNDALGILQTADKAMDEQLKILDTIKVKATQAAQDGQSTKTRNMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + I + + ++ +S
Sbjct: 124 NIANTTSFNGKQLLSGGFTNQSFQIGAQSNQTIQASIGATQSSKIGVTRFETGSMAKESG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ + + +
Sbjct: 184 VAQLTIKNYNGIDDFKFQPVVISSSVGTGMG 214
>gi|218663822|ref|ZP_03519752.1| flagellin C protein [Rhizobium etli IE4771]
Length = 353
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 67/247 (27%), Positives = 97/247 (39%), Gaps = 21/247 (8%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI+TN+ AM+A Q LR +N LE Q +VSSGLRV A+DNAAYWSIA M+SD A+
Sbjct: 1 MTSIITNNGAMAALQTLRAVNSGLEKTQQQVSSGLRVEKASDNAAYWSIATTMRSDKKAM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV--------------------- 99
SAVSD+IG + +D GM K + + TI+N +
Sbjct: 61 SAVSDSIGFAKAVLDTTYDGMDKIREELVTIRNLVITAQSLPPPATDGYSNWTDYQPDAI 120
Query: 100 ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
+ + ++I Q Q+ I +SF G N LR D AK+ + D
Sbjct: 121 YDRSQIAKVDADIYQHWQQISSIVDSASFGGVNLLRNDASEPDLPGAKTEFTTGYVDGQV 180
Query: 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
+ + + ++ I +
Sbjct: 181 LTVSIDTKDTTMINYGRTVDNLWNQPGSENMGYVDGVIWNANIIFPITYVDGGGVVQKNG 240
Query: 220 KKFKLAT 226
+ L
Sbjct: 241 NIYTLRN 247
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 91/257 (35%)
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ P D + D + ++A + + V L
Sbjct: 97 TAQSLPPPATDGYSNWTDYQPDAIYDRSQIAKVDADIYQHWQQISSIVDSASFGGVNLLR 156
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
A+ G + ++ ++ + S +
Sbjct: 157 NDASEPDLPGAKTEFTTGYVDGQVLTVSIDTKDTTMINYGRTVDNLWNQPGSENMGYVDG 216
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + +G N + + M++ +D +I+
Sbjct: 217 VIWNANIIFPITYVDGGGVVQKNGNIYTLRNSEVRIAANGLDRNEYYNGMINQLDERIQA 276
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+GS R+ +Q++F + M D V+KGVGRLVDADM S +LSA QTQQQLA+Q
Sbjct: 277 VVGGMSVVGSTQKRVDMQDEFNQSMMDDVDKGVGRLVDADMEEASAKLSATQTQQQLAIQ 336
Query: 435 ALSIVNNSTARILSLFR 451
AL+I N + I++LF+
Sbjct: 337 ALNIANRAPQTIMTLFQ 353
>gi|48716104|dbj|BAD22840.1| flagellin [Campylobacter lari]
Length = 566
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 41/138 (29%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+V S + NI ++ +T I
Sbjct: 429 NLAFVTAFSVAFGFSAKNDGTSQFAAFATSANIAAKDQQAGVTTLKGAMAVMDIAETAIT 488
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ ++I + I + + ++ + D D A+ES + Q
Sbjct: 489 NLDQIRADLGAVQNQITATLNNISVTQVNIKSAESNIRDVDFAAESANFAKFNILAQSGS 548
Query: 434 QALSIVNNSTARILSLFR 451
A+S N ++ L +
Sbjct: 549 YAMSQANAVQQNVMRLLQ 566
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 78/211 (36%), Gaps = 3/211 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNVASLNAQNNANLNSRALDSSLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 64 INNGNDALGILQTADKAMDEQLKILDTIKVKATQAAQDGQSTKTRNMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + + I + + ++ S
Sbjct: 124 NIANTTAFNGKQLLGGGFTNQSFQIGAQSNQTIQASIGATQSSKIGVTRFETGSMSHSSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ + + +
Sbjct: 184 VAQLTIKNYNGIDDFKFQPVVISSSVGTGMG 214
>gi|3165385|dbj|BAA28606.1| flagellin protein [Borrelia sp. 5MT]
Length = 323
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 56/136 (41%), Gaps = 3/136 (2%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ NL Q+++SSG R++ A+D+AA ++ + + LS S + +
Sbjct: 1 RNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFI 60
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGE 131
+ +++ V+ +K D SIQ EI QL ++ IA + +N
Sbjct: 61 QTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQYNQM 120
Query: 132 NWLRTDLGSSTASIAK 147
+ L + A+
Sbjct: 121 HMLSNKSAAQNVKTAE 136
Score = 84.0 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 21/208 (10%), Positives = 57/208 (27%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + A T+ G + + A+ S N +
Sbjct: 116 QYNQMHMLSNKSAAQNVKTAEELGMQPAKINTPASLSGSQTSWTLRVHVGANQDEAIAVN 175
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + +
Sbjct: 176 IYAANVANLFSGEGAQSAQAAPVQEGAQQEGAQQPAPASAPAQGGVNSPVNVTTTVDANT 235
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E +
Sbjct: 236 SLAKIENAIRMVSDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAAT 295
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+ ++ N +LSL R
Sbjct: 296 TNSILTQSAMAMIAQANQVPQYVLSLLR 323
>gi|149203155|ref|ZP_01880126.1| flagellin-like protein [Roseovarius sp. TM1035]
gi|149143701|gb|EDM31737.1| flagellin-like protein [Roseovarius sp. TM1035]
Length = 276
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 61/203 (30%), Positives = 103/203 (50%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+SAM A Q L+ +N NL QD +S+G V+ A DN+A ++I+++M+SD
Sbjct: 1 MSSILTNNSAMVALQTLQSVNSNLAKTQDMISTGKAVATAKDNSAIFAISKVMESDVSGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AVSDA+ LG S V +A AG + ++++ IK K+ A D IQ+++ +L +Q+
Sbjct: 61 KAVSDALSLGESTVAVASAGAEQITNLLNEIKEKVVAATGENVDHSKIQNDVDELVNQVT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I S FNG N L T + ++ + + + ++D+ + + +D +
Sbjct: 121 SIIGASQFNGANLLNTAGNAGITVLSSLDRDATGTVTASNISVASVDFEANLDLSDIDVT 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
L I+
Sbjct: 181 NSAAADTSLAAIEVHIQTAVDGA 203
Score = 64.0 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/101 (40%), Positives = 59/101 (58%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ A + ++ I+ I+ A A +G+ + RI Q +F+ + DA++ G+G L
Sbjct: 175 SDIDVTNSAAADTSLAAIEVHIQTAVDGAAALGASAKRISDQNEFVSKVTDAIKSGIGAL 234
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
VDAD+ S RL ALQ QQQLA Q+LSI N + ILSLFR
Sbjct: 235 VDADLEETSARLQALQVQQQLATQSLSIANQAPQAILSLFR 275
>gi|14861496|gb|AAK73698.1| flagellin A [Campylobacter jejuni]
Length = 194
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 73/193 (37%), Gaps = 3/193 (1%)
Query: 9 SAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
+A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 1 AALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAISNGN 60
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARG 125
+ A M + + ++ TIK K T + G +Q++I +L +L +IA
Sbjct: 61 DALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANT 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+SFNG+ L + + I S + + + S
Sbjct: 121 TSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGERISSSGEVQFT 180
Query: 186 RYGLLDRNHKIKV 198
+
Sbjct: 181 LKNYNGIDDFKFQ 193
>gi|3165393|dbj|BAA28607.1| flagellin protein [Borrelia sp. 10MT]
Length = 320
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 3 NAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 62
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 63 NLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 122
Query: 137 DLGSSTASIAK 147
+ A+
Sbjct: 123 KSAAQNVKTAE 133
Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 21/200 (10%), Positives = 56/200 (28%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ A T+ G + + A+ S N + +
Sbjct: 121 SNKSAAQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVAN 180
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ + + + + + ++ I+
Sbjct: 181 LFSGEGAQSAQAAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENA 240
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I+ + +G+ +R+ ++ + + ++ ++ DA M E + Q
Sbjct: 241 IRMVSDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQS 300
Query: 432 AVQALSIVNNSTARILSLFR 451
A+ ++ N +LSL R
Sbjct: 301 AMAMIAQANQVPQYVLSLLR 320
>gi|319944156|ref|ZP_08018432.1| flagellin FliC [Lautropia mirabilis ATCC 51599]
gi|319742451|gb|EFV94862.1| flagellin FliC [Lautropia mirabilis ATCC 51599]
Length = 119
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 44/103 (42%)
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
+AN + + +DT + A + G+I +R +++ +
Sbjct: 17 NANAASIGTAAGASAALGKLDTMLATVNAKRAEFGAIQNRFEAVIQTLQVSAENQTAARS 76
Query: 409 RLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R++DAD ASE+ L+ Q QQ LS N+ +LSL R
Sbjct: 77 RIMDADFASETAALTRAQVLQQAGTSMLSQANSLPNNVLSLLR 119
>gi|329850847|ref|ZP_08265692.1| flagellin fljK [Asticcacaulis biprosthecum C19]
gi|328841162|gb|EGF90733.1| flagellin fljK [Asticcacaulis biprosthecum C19]
Length = 274
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 3/162 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SI TN AM A Q L + L Q R+S+GL+V+ A D+ A ++IAQ ++ +L
Sbjct: 1 MSSINTNVGAMVALQNLNRTSSELSSTQSRISTGLKVASAKDDGAAYAIAQSQRATVSSL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQS 117
AV D++ G S VD++ + D+++ +K K A + T ++++++ ++
Sbjct: 61 DAVKDSLSRGVSVVDVSMSAGESVSDMLTQLKEKALAASDTSLDTTSREALKADFDSIRG 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
Q+ S+FNG N + A +
Sbjct: 121 QITKTLSNSTFNGVNLVDGTNAEIGALANADGSSTITVTGED 162
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/104 (41%), Positives = 67/104 (64%)
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
A+ D+++ + ++S +D I +AA ++G+ S + F+ ++D++ G+
Sbjct: 171 TLASDDSFDTATSANALLSTLDDSISNVSAALARLGTSSKALDNHMTFVGKLQDSITSGI 230
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
G LVDAD+A ES +L ALQT+QQL VQALSI N ST+ +LSLFR
Sbjct: 231 GNLVDADLAKESAKLQALQTKQQLGVQALSIANQSTSTVLSLFR 274
>gi|302874585|ref|YP_003843218.1| flagellin domain-containing protein [Clostridium cellulovorans
743B]
gi|307690804|ref|ZP_07633250.1| flagellin [Clostridium cellulovorans 743B]
gi|302577442|gb|ADL51454.1| flagellin domain protein [Clostridium cellulovorans 743B]
Length = 278
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 59/146 (40%), Gaps = 2/146 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N ++++ + D R+SSGL++ ++ D+ + ++ ++ V
Sbjct: 3 INVNVASLNVYRNYTDSLDRQGEALSRISSGLKIQNSKDDPVKLAASEKVRMQIRTSEMV 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT--AGVERGTDSKSIQSEITQLQSQLRD 121
+ S + + + G++ D M +K + G + D S+QSE+ + +
Sbjct: 63 ARNAQDAISLLQVGEGGLTSISDSMQRLKELLVSCDGTKTPEDLASVQSEVDSIIKHIDV 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
A + NG + ++ + A
Sbjct: 123 TAHTTEMNGVKIIGSEYNLRMRTGAT 148
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 33/87 (37%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+S +D IK K G++ +R+ + + D +E L DAD+A E
Sbjct: 187 ISKVDEAIKKVNEYRSKFGALQNRLESCYNDTVKITDTLESADSDLRDADVAEEMANYVT 246
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q ++ N +L + +
Sbjct: 247 QDILVQAGFALMAQTNKFPQDVLQILQ 273
>gi|254459153|ref|ZP_05072575.1| flagellin B [Campylobacterales bacterium GD 1]
gi|207084046|gb|EDZ61336.1| flagellin B [Campylobacterales bacterium GD 1]
Length = 298
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/209 (13%), Positives = 59/209 (28%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
N + ++ A + W+ T +D
Sbjct: 86 TYMSVGQNFDGIVGGTVTNQAIANYPAAEATIRAFGDALASSVWSSWINGDTYAQQIADV 145
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+T V ++ S+ + + T + A
Sbjct: 146 NAITTTYNNNFPATNAVGGGGSSFTLHTGAYAGNTQSISIGNMKVANAVGTIDVTSQAAA 205
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
E + IDT +K +G+ +++ I + + VE ++ D D A+ES +
Sbjct: 206 ENSIGTIDTALKTVVEQRATLGAAQNKLESTIRNISVTQVNVESAKSQIEDVDFAAESAK 265
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
+ Q ++S N ++ L
Sbjct: 266 FAKFNIIAQSGSYSMSQANAQPQSVMRLL 294
>gi|94987012|ref|YP_594945.1| flagellin-like protein [Lawsonia intracellularis PHE/MN1-00]
gi|94731261|emb|CAJ54624.1| Flagellin and related hook-associated proteins [Lawsonia
intracellularis PHE/MN1-00]
Length = 294
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 42/131 (32%)
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ + S + L + + A + + I+ I
Sbjct: 164 GNSSAEDYYEISIHSATASALGLGNGTTGPGATISTQAAAQAALDAINDAIVSKDNIRAS 223
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G++ +R+ + + ++ R+ D D+++E T Q Q V LS N+
Sbjct: 224 LGTLQNRLEATITNLNTQAENLQAAESRISDIDVSTEMTEFVRNQILTQSGVAMLSQANS 283
Query: 442 STARILSLFRG 452
L G
Sbjct: 284 LPKMASQLISG 294
Score = 95.6 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 61/184 (33%), Gaps = 3/184 (1%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ L + L R+SSGLRV AAD++A +I ++M++D + S V
Sbjct: 16 RNLNESYSRLSQSTRRLSSGLRVGTAADDSAGLAIRELMRADIKTFQQGARNANDAISLV 75
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLRDIARGSSFNGE 131
+A + + + +K +S +SE + S++ I+ + FNG
Sbjct: 76 QVADGALGVIDEKLIRMKELAEQAATGTYNSTQRLIIESEYQAMASEITRISVATEFNGI 135
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
L L G+ Y + + + G G
Sbjct: 136 KLLDGSLSGPHKGTNLQQTGALRVHFGPGNSSAEDYYEISIHSATASALGLGNGTTGPGA 195
Query: 192 RNHK 195
Sbjct: 196 TIST 199
>gi|146293683|ref|YP_001184107.1| flagellar hook-associated protein FlgL [Shewanella putrefaciens
CN-32]
gi|145565373|gb|ABP76308.1| flagellar hook-associated protein 3 [Shewanella putrefaciens CN-32]
Length = 403
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/436 (10%), Positives = 109/436 (25%), Gaps = 53/436 (12%)
Query: 8 HSAMSASQKLRDI---NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
SA +Q + + + +++SSG +V+ A D+ + N +
Sbjct: 4 SSAQIFNQSITSVLQKQTATSKILEQLSSGKKVNTAGDDPVAALGIDNLNQRNALVDQFM 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLRD 121
I ++++ + ++ + A ++ S+I+ + G ++ + I E+ +L
Sbjct: 64 KNIDYATNRLAVTESKLGSAENLASSIREQVMRAVNGTLADSERQMIADEMKGSLEELLS 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA +G + I ++ + +
Sbjct: 124 IANSKDESGNYMFSGYSTDKEPFAFDNSTPPKIVYSGDSGIQNSLVQSGVALGTNVPGDS 183
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ L + Q + + A + L N
Sbjct: 184 AFMKAPNGLGDYSVNYLASQQGEFSVKTAKIADASTYLADTYTFNFIDNGLGGTNLQVLD 243
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A +
Sbjct: 244 SANNPVANIANFDATTPVSFNG-------------------------------------- 265
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ + + I S I + + + +
Sbjct: 266 ---------IEVKVSGKPSAGDSFTMEPQAEVSIFDTISSAIALIEDPNSANTPQGRAQL 316
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++++ ID+ + ++A G+ + ++ + + RL D D AS T
Sbjct: 317 AQILNNIDSGVNQISSARSVAGNNLKAVESYKETHTEEKVVNTSALSRLEDLDYASAITE 376
Query: 422 LSALQTQQQLAVQALS 437
Q S
Sbjct: 377 FEKQQLALNAVSSVFS 392
>gi|110632649|ref|YP_672857.1| flagellin-like [Mesorhizobium sp. BNC1]
gi|110283633|gb|ABG61692.1| flagellin-like protein [Chelativorans sp. BNC1]
Length = 289
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 64/148 (43%), Positives = 90/148 (60%), Gaps = 1/148 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI TN SAM+A Q L I+ N+ Q R+S+GLRV++A+DNAAYWSIA MKSDN AL
Sbjct: 1 MASINTNASAMTALQTLNTISKNMATTQSRISTGLRVAEASDNAAYWSIATSMKSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE-RGTDSKSIQSEITQLQSQL 119
S+V DA+GLG+ K+D A G+++ I + IK K+ + D + IQ+EI LQ +
Sbjct: 61 SSVQDALGLGAGKLDTAYTGINEVIGTVDKIKQKLVSARGASQEDQQKIQTEIEALQEHI 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAK 147
+ S++ G N L+ + S
Sbjct: 121 TSVVGNSNYAGSNILQDGTDVNIVSSYN 148
Score = 73.6 bits (178), Expect = 7e-11, Method: Composition-based stats.
Identities = 64/285 (22%), Positives = 100/285 (35%)
Query: 167 DYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ T L +T R + + S K
Sbjct: 5 NTNASAMTALQTLNTISKNMATTQSRISTGLRVAEASDNAAYWSIATSMKSDNKALSSVQ 64
Query: 227 TSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD 286
+ T V + + A + +
Sbjct: 65 DALGLGAGKLDTAYTGINEVIGTVDKIKQKLVSARGASQEDQQKIQTEIEALQEHITSVV 124
Query: 287 IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI 346
N + + +D + T S + L + +G +
Sbjct: 125 GNSNYAGSNILQDGTDVNIVSSYNRTGATVAIDEITITGSSAQVLSDDASAGIVSGIVAS 184
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
T + A + A++ + ++T + A +G+ SR+ LQ+DF+ + DA+++G
Sbjct: 185 TFFDASGAAIDDTAIDTALGTVETALASLAEQASVLGAAKSRVDLQKDFVSKLSDAIDRG 244
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
VG+LVDADM ES RLSALQ QQQL VQALSI N +T ILSLFR
Sbjct: 245 VGQLVDADMNEESARLSALQVQQQLGVQALSIANQNTQGILSLFR 289
>gi|237757178|ref|ZP_04585600.1| flagellar filament 34.5 kDa core protein [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237690661|gb|EEP59847.1| flagellar filament 34.5 kDa core protein [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 285
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 77/216 (35%), Gaps = 2/216 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N+SA L +R+S+G R++ AAD+AA + IA +K +L
Sbjct: 5 INYNYSADFTLVNLNQTELQQNKSLERLSTGFRINRAADDAAGYFIANQLKQYAASLQQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD--SKSIQSEITQLQSQLRD 121
+ G S IA+ + + +++ IK+K+ D IQ +I L +
Sbjct: 65 TRNANDGISISQIAQGALKEVYNILVDIKSKVIQAANTSDDTSRGQIQQDINSLADAIAK 124
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I + + FNG N ++ IG + + P TV + +
Sbjct: 125 IFKDTEFNGINLFSGAGPTTFTIHYGGRIGQELVMTTASATVQVGTGTNTPSTVAIGGTD 184
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI 217
+ N + ++K +D
Sbjct: 185 YAIDVTSQTAANASVSTVDALIKAVDDMAAKFGSYQ 220
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 35/102 (34%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
+ A VS +D IK A K GS + + R + R
Sbjct: 184 DYAIDVTSQTAANASVSTVDALIKAVDDMAAKFGSYQIELEKIISNNETARVNTSEAESR 243
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + DMA+E + LQ Q L+ N +L L R
Sbjct: 244 IRNVDMANEMANFTKLQILMQSGTAMLAQANAKNQLVLQLLR 285
>gi|138896698|ref|YP_001127151.1| flagellar hook-associated protein FlgL [Geobacillus
thermodenitrificans NG80-2]
gi|134268211|gb|ABO68406.1| Flagellar-hook associated protein 3 [Geobacillus
thermodenitrificans NG80-2]
Length = 301
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 3/141 (2%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A + + L NL Q+++S+G +++ +D+ +++ + +
Sbjct: 9 ANNMLKHLSASYANLGKYQEQLSTGKKINRPSDDPVVAMKGMAYRTNLTEVEQLKRNFSE 68
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGS 126
+ ++ + A + KA + I+ I ++I EI QL L IA
Sbjct: 69 AYNWIENSDAALDKATQALQRIRELIVQASNDTYEETQRQAISQEIKQLTEHLVTIANTK 128
Query: 127 SFNGENWLRTDLGSSTASIAK 147
+ + T+ I
Sbjct: 129 VGDKYIFNGTNTLQPPVQIVN 149
Score = 46.7 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 35/114 (30%)
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ L + D + E + +ID I +
Sbjct: 174 NVDPTKVFHYDASQKGKGLFSDLQSLANDLDDPTKTGKDINEYLGYIDQHITNLLGVRAE 233
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G+ +R+ L ED I +K + D DM T L ++ + A+
Sbjct: 234 LGARMNRVELMEDRINQQEVIAKKVLSDNEDVDMERVITDLKVQESVHRAALAV 287
>gi|190893969|ref|YP_001980511.1| flagellin C protein [Rhizobium etli CIAT 652]
gi|190699248|gb|ACE93333.1| flagellin C protein [Rhizobium etli CIAT 652]
Length = 343
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 51/136 (37%), Positives = 75/136 (55%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
T + S + V + + + ++ +S I+ +
Sbjct: 165 GMTSTGAIETSSGIIGTAFNGTYGGTVIAMPSIYDLDITGFTQGQLDAALSGIELVLGAM 224
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
TAA +GSIS+RI LQE+ + + D+++ G+GRLVDADM ES+RLSALQTQQQL +Q+
Sbjct: 225 TAAGSALGSISTRIQLQENLVSGLHDSIDSGIGRLVDADMEEESSRLSALQTQQQLGIQS 284
Query: 436 LSIVNNSTARILSLFR 451
LSI N+S IL+LFR
Sbjct: 285 LSIANSSAQNILTLFR 300
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 75/136 (55%), Positives = 95/136 (69%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M+A Q LR +N +L+ Q RVSSG RV AADNAAYWSIA M+SDN ALSAVSDA+GLG
Sbjct: 1 MAALQTLRGVNDSLKDTQGRVSSGYRVEKAADNAAYWSIATTMRSDNLALSAVSDALGLG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
++KVD A A M A+D++S IK KI A E+G D IQ E+ QLQ QL IA+ +SF+G
Sbjct: 61 AAKVDTAYAAMDSALDIVSEIKEKIVAATEKGVDKTKIQQELDQLQEQLLSIAQSASFSG 120
Query: 131 ENWLRTDLGSSTASIA 146
ENW+ G+ + +
Sbjct: 121 ENWVAGASGTKSVVSS 136
>gi|87242360|gb|ABD33719.1| flagellin [Bacillus thuringiensis serovar israelensis]
Length = 245
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ DR+SSG R++ A+D+AA +IA MK+ G L+ G S + A + +
Sbjct: 1 AKMSNAMDRLSSGKRINSASDDAAGLAIATRMKAREGGLNVAGRNTQDGMSLIRTADSAL 60
Query: 82 SKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ + S+Q E QL Q+ IA+ + FN + L T
Sbjct: 61 NSVSNILLRMRDLANQSANGTNTKGNQASLQKEFAQLTEQIDYIAKNTQFNDQQLLGTAD 120
Query: 139 GSSTASI 145
Sbjct: 121 KKIKIQT 127
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 32/79 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ++ + ID I +G+ +R + +K ++ ++ DAD
Sbjct: 167 AADPTSAKQAIDAIDAAITTVAGQRATLGATLNRFEFNANNLKSQETSMADAASQIEDAD 226
Query: 415 MASESTRLSALQTQQQLAV 433
MA E + ++ + + +
Sbjct: 227 MAKEMSEMTKFKILNEAGI 245
>gi|157101697|gb|ABV23562.1| flagellin C [Bacillus thuringiensis serovar sumiyoshiensis]
gi|157101700|gb|ABV23564.1| flagellin C [Bacillus thuringiensis serovar fukuokaensis]
Length = 284
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 68 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEID 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
IA ++FNG +L +I
Sbjct: 128 HIAGKTNFNGNAFLNKGTDGKDITI 152
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 56/203 (27%)
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
L + + S M + + N+ +
Sbjct: 82 DAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEIDHIAGKTNFNGNAFL 141
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
K + S + + TL D + ++ +
Sbjct: 142 NKGTDGKDITIQLSDASSDTMTIAAIDTKAITTATLATPTATGADKALNAASAPAQITAL 201
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
DT I+ A GS +R+ + + + ++ DADMA E + ++ +
Sbjct: 202 DTAIQNIADARATFGSQLNRLDHNLNNVTSQATNMASSASQIEDADMAKEMSNMTKFKIL 261
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
+ + LS N + + L +
Sbjct: 262 NEAGISMLSQANQTPQMVSKLLQ 284
>gi|327194121|gb|EGE60993.1| flagellin C protein [Rhizobium etli CNPAF512]
Length = 292
Score = 96.0 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 51/144 (35%), Positives = 79/144 (54%)
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ + + + ++ ++ ++ I
Sbjct: 149 MTDYVLDTSSTGNVLFGMNGGSIETSTGILGTADPNGDSVYSLDITNFTTGQIQSALTTI 208
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
++ + T+A ++GSIS+RI LQEDF+ + D+++ GVGRLVDADM ES++LSALQTQ
Sbjct: 209 ESALSAMTSAGAQLGSISTRIDLQEDFVGALSDSIDSGVGRLVDADMEEESSKLSALQTQ 268
Query: 429 QQLAVQALSIVNNSTARILSLFRG 452
QQLA+Q+LSI N+S+ ILSLFRG
Sbjct: 269 QQLAIQSLSIANSSSQNILSLFRG 292
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 74/136 (54%), Positives = 93/136 (68%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M+A Q LR IN NLE Q+ VS+G RV A+DNAAYWSIA M+SDN ALSAVSDA+GLG
Sbjct: 1 MAALQTLRSINSNLETTQNSVSTGYRVDTASDNAAYWSIATTMRSDNKALSAVSDALGLG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
++KVD A M AIDV+ IK K+ A E G D +Q EI+QLQ QL IA+ +SF+G
Sbjct: 61 AAKVDTAYTAMDSAIDVVDEIKAKLVAATEDGVDKSKVQEEISQLQEQLMSIAQSASFSG 120
Query: 131 ENWLRTDLGSSTASIA 146
ENW+ G+ + +
Sbjct: 121 ENWVAGADGTKSVVSS 136
>gi|229144371|ref|ZP_04272777.1| Flagellin [Bacillus cereus BDRD-ST24]
gi|228639158|gb|EEK95582.1| Flagellin [Bacillus cereus BDRD-ST24]
Length = 281
Score = 95.6 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 63/138 (45%), Gaps = 3/138 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + +R+SSG ++ AAD+AA +IA M++ G L+ +
Sbjct: 1 MRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVGARNTQDA 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + + ++ +++ +++ T G D S+ E +LQ ++ IA ++
Sbjct: 61 MSALRTTDSALNSISNILLRMRDLATQSANGTNDGKDKDSLNLEFKELQEEINHIAGKTN 120
Query: 128 FNGENWLRTDLGSSTASI 145
FNG++ L SI
Sbjct: 121 FNGKSLLAAAGTDKNISI 138
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 33/85 (38%)
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+D I+ GS +R+ + + + ++ DADMA E + ++ +
Sbjct: 197 QLDAAIQKVADMRATFGSQLNRLDHNLNNVNSQATNMAASASQIEDADMAKEMSEMTKFK 256
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
+ + LS N + + L +
Sbjct: 257 ILNEAGISMLSQANQTPQMVSKLLQ 281
>gi|99080880|ref|YP_613034.1| flagellin-like [Ruegeria sp. TM1040]
gi|99037160|gb|ABF63772.1| Flagellar filament 33 kDa core protein (Class B) [Ruegeria sp.
TM1040]
Length = 281
Score = 95.6 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/182 (29%), Positives = 87/182 (47%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ +N +L Q +S+G V A DN+A W+I++ M+SD
Sbjct: 1 MSSILTNNGAMVALQTLKSVNDDLGKAQTSISTGKEVGTAKDNSAVWAISKTMESDIAGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
++ D + +G + V +A AG + ++ ++ +K I + D IQ++I Q+
Sbjct: 61 ESIEDGLSVGEATVAVASAGAEQIVEKLTEMKELIVSAQSENVDHAKIQTDIDSKADQID 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FNG N L TD+ + A+ + G V I LD +
Sbjct: 121 AIISAAQFNGANLLATDVDGNGATSLGVLASLDREGAGGTVTAVEISVASADFESGLDVA 180
Query: 181 TD 182
Sbjct: 181 GM 182
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 62/121 (51%)
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
+ S S + A + + + I+T I+ A A +G+ +SR+
Sbjct: 161 VTAVEISVASADFESGLDVAGMTSITDATTAATALGEIETLIQTAITGAAALGADASRLE 220
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
Q +F+ + D++ KGV + D +M S RLSALQTQQ LA Q+L+I N + + +L LF
Sbjct: 221 DQSEFVGNLVDSMTKGVSTMTDTNMEEASARLSALQTQQDLATQSLTIANEAPSSLLQLF 280
Query: 451 R 451
R
Sbjct: 281 R 281
>gi|332701539|ref|ZP_08421627.1| flagellar hook-associated protein 3 [Desulfovibrio africanus str.
Walvis Bay]
gi|332551688|gb|EGJ48732.1| flagellar hook-associated protein 3 [Desulfovibrio africanus str.
Walvis Bay]
Length = 492
Score = 95.6 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/492 (10%), Positives = 130/492 (26%), Gaps = 50/492 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ +A + + + ++ +S R++ +D+ + ++ ++
Sbjct: 3 ISTSMIYDNAILNMNKSLADYIGLSEQNASKKRINRPSDDPSGMRNVLTSRTLLSEIAQR 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ + + + + +++ ++ I E ++ +L
Sbjct: 63 QENLDTAKGWLSAVDDAIESSSTLVTRLEELAQQASTGTLSAEQRSMIALEAREIYEELV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV--------QITTIDYYLDP 172
+A S V + +
Sbjct: 123 RLANTEFNGDHVLAGHKTDSPAFETCLWATVDDDTLGQDAVVSVSGSSATSIKVQFTSAG 182
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
+ + G + + L V V A+G++ + + +G +
Sbjct: 183 TVGTDALTYRYSMDGGNTWIDATLAAGDTELDLGGVQVGLAAGSVVSANTGVDDDTGGTI 242
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT 292
+ + + T+ S V G D
Sbjct: 243 LFVRPAAQYLGDDNDTSPVSLSGTSQVSATAQGYFSGDVLVRFDNDANISGTLDYSYSTD 302
Query: 293 TKNSI----------------------------------TSDPGYTNSTVAKVGNTHYYV 318
+S T P + + + V
Sbjct: 303 GGHSWVTAQTATGGVLAVPGGYVELTAAPSGDVYSGDILTVRPHEADIKLPISDTSSVTV 362
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ + + S + +N++ A+ + + + + + T+A
Sbjct: 363 NAVGKDIFGGLYNGEAAGDPDSNLLEIAGELIGYMEFNQRDAIGDSLEKLKSAHEQLTSA 422
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
AG+IG +R+ L + + L +D E + + D D S L+ + Q LS
Sbjct: 423 AGEIGGRINRVELAQTSLTLEKDRAETFLSAVEDVDEIQLSVDLARSEYIYQ---SVLS- 478
Query: 439 VNNSTARILSLF 450
+S LSL
Sbjct: 479 -TSSKILKLSLL 489
>gi|188996914|ref|YP_001931165.1| flagellin domain protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931981|gb|ACD66611.1| flagellin domain protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 285
Score = 95.6 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 76/216 (35%), Gaps = 2/216 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N+SA L +R+S+G R++ AAD+AA + IA +K +L
Sbjct: 5 INYNYSADFTLVNLNQTEAQQNKSLERLSTGFRINRAADDAAGYFIANQLKQYAASLQQG 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD--SKSIQSEITQLQSQLRD 121
+ G S I + + + +++ IK+K+ D IQ +I L +
Sbjct: 65 TRNANDGISLAQIGQGALKEVYNILVDIKSKVIQASNTSDDTSRGQIQQDINSLADAIGK 124
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I + + FNG N ++ + + P TV + +T
Sbjct: 125 IFKDTEFNGLNLFSGAGPTTFTIHYGGRTNQELVMTTASATVQVGTATNAPSTVAIGGTT 184
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI 217
+ + N + ++K +D
Sbjct: 185 FAIDVTTQANANASVSTVDALIKAVDDMAAKFGSYQ 220
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 34/97 (35%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ VS +D IK A K GS + + R + R+ + D
Sbjct: 189 VTTQANANASVSTVDALIKAVDDMAAKFGSYQIELEKIISNNETARVNTSEAESRIRNVD 248
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA+E + LQ Q L+ N +L L R
Sbjct: 249 MANEMANFTKLQILMQSGTAMLAQANAKNQLVLQLLR 285
>gi|125974727|ref|YP_001038637.1| flagellar hook-associated protein FlgL [Clostridium thermocellum
ATCC 27405]
gi|256005262|ref|ZP_05430229.1| flagellar hook-associated protein 3 [Clostridium thermocellum DSM
2360]
gi|281418804|ref|ZP_06249823.1| flagellar hook-associated protein 3 [Clostridium thermocellum JW20]
gi|125714952|gb|ABN53444.1| flagellar hook-associated protein 3 [Clostridium thermocellum ATCC
27405]
gi|255990813|gb|EEU00928.1| flagellar hook-associated protein 3 [Clostridium thermocellum DSM
2360]
gi|281407888|gb|EFB38147.1| flagellar hook-associated protein 3 [Clostridium thermocellum JW20]
gi|316941861|gb|ADU75895.1| flagellar hook-associated protein 3 [Clostridium thermocellum DSM
1313]
Length = 302
Score = 95.6 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 22/166 (13%), Positives = 61/166 (36%), Gaps = 4/166 (2%)
Query: 19 DINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAK 78
++ Q +++G +++ +D+ + A +++D + + S ++I +
Sbjct: 18 KNLARMDKYQQMLATGKKITVPSDDPVVAARALKLRTDVAQIEQYKTNVQDAMSWLEITE 77
Query: 79 AGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+ ++ D++ + D+K I+ E+ QL++QL IA S++ G
Sbjct: 78 SAVANVGDILQRARELAVQASSGTTTEEDTKKIKQEVEQLKNQLIKIA-NSTYAGRYIFS 136
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
++ + + + I ++ D
Sbjct: 137 GFKTNTRLMDDDGYFTMDVANSEAIIYQIGISDSININVPGGDLFN 182
Score = 47.8 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 16/170 (9%), Positives = 40/170 (23%)
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
+ + + A R + + +
Sbjct: 101 TTTEEDTKKIKQEVEQLKNQLIKIANSTYAGRYIFSGFKTNTRLMDDDGYFTMDVANSEA 160
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
+ ++ D G + + + N + + + ++
Sbjct: 161 IIYQIGISDSININVPGGDLFNGGIDAGAGGKGKLIADFEAYINALDSGDHSLISDAITN 220
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
ID + IG+ +R+ L D + + K + D D A
Sbjct: 221 IDENLNHVLRIRADIGARYNRLELTADRLDIDSINFRKLMSENEDVDQAE 270
>gi|85706201|ref|ZP_01037296.1| flagellin protein [Roseovarius sp. 217]
gi|85669365|gb|EAQ24231.1| flagellin protein [Roseovarius sp. 217]
Length = 276
Score = 95.6 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/181 (33%), Positives = 101/181 (55%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+SAM A Q L+ +N NL QD +S+G V+ A DN+A ++I+++M+SD
Sbjct: 1 MSSILTNNSAMVALQTLQSVNSNLAKTQDMISTGKAVATAKDNSAIFAISKVMESDVSGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AVSDA+ LG S V +A AG + ++++ IK K+ A D IQ+++ +L +Q+
Sbjct: 61 KAVSDALSLGESTVAVASAGAEQITNILNDIKEKVVAATGENVDHAKIQNDVDELVNQVN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I S FNG N L T + ++ + + + ++D+ + + +D S
Sbjct: 121 SIIGASQFNGANLLDTAGNAGITVLSSLDRDATGTVTASNISVASVDFETNLDLSNIDVS 180
Query: 181 T 181
+
Sbjct: 181 S 181
Score = 64.8 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 67/137 (48%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + S+ + + V + + A + ++ I+ I+
Sbjct: 139 NAGITVLSSLDRDATGTVTASNISVASVDFETNLDLSNIDVSSATAADSSLAAIEVHIQT 198
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
A A +G+ + RI Q +F+ + DA++ G+G LVDAD+ S RL ALQ QQQLA Q
Sbjct: 199 AVDGAAALGASARRISDQNEFVSKVTDAMKSGIGALVDADLEEASARLQALQVQQQLATQ 258
Query: 435 ALSIVNNSTARILSLFR 451
+LSI N + ILSLFR
Sbjct: 259 SLSIANQAPQAILSLFR 275
>gi|294665572|ref|ZP_06730853.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
gi|292604670|gb|EFF48040.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
Length = 401
Score = 95.6 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/443 (12%), Positives = 114/443 (25%), Gaps = 55/443 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ + + L ++ ++SSG R+ A D+ A + A++
Sbjct: 5 ISTSMMYSQSVASMGAKQSRLNQLESQLSSGQRLVTAKDDPVAAGTAVGLDRALAAITRF 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ +++ + + +S+A D M+ + D K+I SE+T L+ +
Sbjct: 65 GENANNVQNRLGLQENALSQAGDKMARVTELAVQASNSSLSPDDRKAIASELTALRESMV 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G S I + ++ D K D ++ +
Sbjct: 125 SLANSTDGTGRYLFGGTADGSAPFIKSNGSVTYNGDQTQKQVEVAPDTFVSDTLPGSEIF 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G +D + L T + + +
Sbjct: 185 MRIRTGDGTVDAHANAANTGTGLLLDFSRDASTGSWNGGSYSVQFTAADTYEVRDSTNTV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
G + AA + + S + AS T D
Sbjct: 245 VGTGTYKEGEDINAAGVRMRISGAPAVGDSFQIGASGTKDVFSTIDDL------------ 292
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ LN
Sbjct: 293 ----------------------------------------VGALNSDTLTAPQKAAMINT 312
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ + I A G+ S I ++ ++ + + D D AS
Sbjct: 313 LQSSMRDITQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTSLSSIRDLDYASAIG 372
Query: 421 RLSALQTQQQLAVQALSIVNNST 443
+ + Q A + +S+
Sbjct: 373 QYQLEKASLQAAQTIFQQMQSSS 395
>gi|332703779|ref|ZP_08423867.1| flagellin domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332553928|gb|EGJ50972.1| flagellin domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 299
Score = 95.6 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 25/204 (12%), Positives = 60/204 (29%)
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
+ + + + S + ++
Sbjct: 96 ATQASTGTYNSDQRLIIDSEYQAMASEITRIASATDFNGVYLLNGNLSGANSTHDGSALK 155
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ ++ + D + V L+ A+ + + + ++ + I
Sbjct: 156 STGPLKVHFGTANDSAEDYYYIAIDNSTASALGVGLSAGATADGASISTQENAQKALEAI 215
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
+ I +G + +R+ +++ + ++ R+ D D+ASE T Q
Sbjct: 216 NNAIISKDKIRANLGGLQNRLENTVSNLQIQAENLQAAESRISDVDVASEMTEFVRQQIL 275
Query: 429 QQLAVQALSIVNNSTARILSLFRG 452
Q AV LS N+ + L G
Sbjct: 276 SQSAVAMLSQANSLPRMAMQLIGG 299
Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 3/141 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I N A +A++ L NL V R+SSGLRV AAD+AA + ++M++D +L+
Sbjct: 3 LTINHNLMATNAARNLSSSYSNLSVSTRRLSSGLRVGTAADDAAGLAARELMRADISSLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A G+ + + +K T I SE + S+
Sbjct: 63 QGVRNANDAISLIQTADGGLQVIDEKLIRMKELATQASTGTYNSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLG 139
+ IA + FNG L +L
Sbjct: 123 ITRIASATDFNGVYLLNGNLS 143
>gi|163758023|ref|ZP_02165111.1| flagellin protein [Hoeflea phototrophica DFL-43]
gi|162284312|gb|EDQ34595.1| flagellin protein [Hoeflea phototrophica DFL-43]
Length = 324
Score = 95.6 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 100/291 (34%), Positives = 144/291 (49%), Gaps = 2/291 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI+TN +AM+A Q LR IN ++E+ Q+R+SSG RV AADN+AYWSIA M+SDN A+
Sbjct: 1 MTSIMTNSAAMAALQTLRSINSDMEMTQNRISSGYRVDTAADNSAYWSIATTMRSDNQAM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S V DA+GLG++KVD+A GM +I+V+S IK K+ A E G D I E+T+L++QL
Sbjct: 61 STVKDALGLGAAKVDVAYTGMESSIEVVSEIKAKLVAAREPGVDKTKIDKELTELKNQLV 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ +SF+GENWL A+ KSV+G F RD NG V ITT+D T++ +S
Sbjct: 121 SISESASFSGENWLNNTTT--AAAGTKSVVGGFNRDVNGLVSITTLDVNTSTTTLIGAAS 178
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ +D N + + T + + A A
Sbjct: 179 ENLGILTKDIDANALDPDATTTTARNYFLIDTGATTGTAASGTAIALTAATTDAQVDDMI 238
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
+A + A+ + S + +G
Sbjct: 239 RAVDSMFTQMTDAASNLGAVNKRISMQQDFVSNLMDSIDSGIGRLVDADMN 289
Score = 89.0 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 66/89 (74%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+M+ +D+ T AA +G+++ RI +Q+DF+ + D+++ G+GRLVDADM ESTRL
Sbjct: 236 DMIRAVDSMFTQMTDAASNLGAVNKRISMQQDFVSNLMDSIDSGIGRLVDADMNEESTRL 295
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
ALQTQQQL +Q+LSI N+++ ILSLFR
Sbjct: 296 KALQTQQQLGIQSLSIANSNSQNILSLFR 324
>gi|294624308|ref|ZP_06703011.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|292601390|gb|EFF45424.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
Length = 401
Score = 95.6 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/443 (12%), Positives = 114/443 (25%), Gaps = 55/443 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ + + L ++ ++SSG R+ A D+ A + A++
Sbjct: 5 ISTSMMYSQSVASMGAKQSRLNQLESQLSSGQRLVTAKDDPVAAGTAVGLDRALAAITRF 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ +++ + + +S+A D M+ + D K+I SE+T L+ +
Sbjct: 65 GENANNVQNRLGLQENALSQAGDKMARVTELAVQASNSSLSPDDRKAIASELTALRESMV 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G + I + ++ D K D ++ +
Sbjct: 125 SLANSTDGTGRYLFGGTADGNAPFIKSNGSVTYNGDQTQKQVEVAPDTFVSDTLPGSEIF 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G +D + L T + + +
Sbjct: 185 MRIRTGDGTVDAHANAANTGTGLLLDFSRDASTGSWNGGSYSVQFTAADTYEVRDSTNTV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
G + AA + + S + AS T D
Sbjct: 245 VGTGTYKEGEDINAAGVRMRISGAPAVGDSFQIGASGTKDVFSTIDDL------------ 292
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ LN
Sbjct: 293 ----------------------------------------VGALNSDTLTAPQKAAMINT 312
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ + I A G+ S I ++ ++ + + D D AS
Sbjct: 313 LQSSMRDITQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTSLSSIRDLDYASAIG 372
Query: 421 RLSALQTQQQLAVQALSIVNNST 443
+ + Q A + +S+
Sbjct: 373 QYQLEKASLQAAQTIFQQMQSSS 395
>gi|297531375|ref|YP_003672650.1| flagellar hook-associated protein 3 [Geobacillus sp. C56-T3]
gi|297254627|gb|ADI28073.1| flagellar hook-associated protein 3 [Geobacillus sp. C56-T3]
Length = 297
Score = 95.6 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/210 (12%), Positives = 62/210 (29%), Gaps = 3/210 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + A + +++ NL+ Q ++S+G +++ +D+ +S+ +
Sbjct: 3 ITQSMLANNTLKQITRSYANLDKYQTQLSTGKKITRPSDDPVVAMKGIAYRSNLAEVEQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ V+ + + + KA + I+ ++I E+ QL L
Sbjct: 63 KRNFSEAYNWVENSDSALDKATQALQRIRELTVQASNDTYEETQRQAIAKEVRQLTEHLV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + + ++ S + Y+ +
Sbjct: 123 TIANTKVGDKYIFNGAKTTDPPVTVNPDGTISVSTNSQQVNIELAKGIYIPVNIPPSTAF 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
G+ + L P D
Sbjct: 183 GAGSGLFSDLQNLAASLENPSTTGDDVTGY 212
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 45/144 (31%)
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
TT +T +P T S + + + L +
Sbjct: 140 TTDPPVTVNPDGTISVSTNSQQVNIELAKGIYIPVNIPPSTAFGAGSGLFSDLQNLAASL 199
Query: 352 TDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ + + +D+ + ++G+ +RI L ED I + EK +
Sbjct: 200 ENPSTTGDDVTGYLDKLDSHLTNLLGVRAELGARMNRIELMEDRIDSQQVIAEKMLSDNE 259
Query: 412 DADMASESTRLSALQTQQQLAVQA 435
D D+ T L ++ + A+
Sbjct: 260 DVDLEKVITDLKTQESVHRAALAV 283
>gi|83309783|ref|YP_420047.1| flagellin-like protein [Magnetospirillum magneticum AMB-1]
gi|82944624|dbj|BAE49488.1| Flagellin and related hook-associated protein [Magnetospirillum
magneticum AMB-1]
Length = 528
Score = 95.6 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 69/528 (13%), Positives = 133/528 (25%), Gaps = 77/528 (14%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ + + S L+ + Q R+S+GL+V A D+ + ++ +
Sbjct: 1 MSDVTLTSAVRSNLLALQSTQGLVNRTQSRLSTGLKVGSAIDDPVAYFQSKALSDRASDF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA-GVERGTDSKSIQSEITQLQSQL 119
D I G S + A G+S ++ +K + S+ + L+SQL
Sbjct: 61 QGKKDNIDQGVSSLSTALQGISGVSTLVKQLKGLALNAQSASSSQIGSLVQQFNALRSQL 120
Query: 120 RDIARGSSFNGENWLRT-------------DLGSSTASIAKSVIGSFIRDDNGKVQITTI 166
++A S + G+N + S+ V + +
Sbjct: 121 DNLALDSQYQGQNLVAGKGQTLTVSFSNLTGSTLEVTSVDVRVGATGLNIAKAVTSNGGF 180
Query: 167 DYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
D + + + + T
Sbjct: 181 QLSFDDASGAALGTEGVVKATYAGTATALTSGTYTFSYGSATVSFTVYSAGGTTGANADV 240
Query: 227 TSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD 286
+ D T + + + + + D
Sbjct: 241 EAFTTTSVLANGQDFNFRATTAGDTDELNVTQGSIQNNNHFAVEYHASTGGGVSGLAGGD 300
Query: 287 IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI 346
+ S + N + V + +G +
Sbjct: 301 SLNFVMNGLTGNSLASGNYTFSFGGYNMTFTVASAGDVTAGTFTTTNTFVNGTFGTAGGV 360
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKI------------------------ 382
T + + +E V + A +G
Sbjct: 361 TANTLALTLSTGTGTKENVVTFTAAVSSLGATSGPYKGQAYYSAGGISGAYGFQISAETK 420
Query: 383 ---------------GSISS---RIHLQEDFIKLMRDAV--------------------- 403
G + + ++ ++ +
Sbjct: 421 VGYVSGQYVLDSKLTGVVQNLVTQLDANLQVLRSHAQNLGTNVALLNTRLDFTKNYVDLL 480
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ G G+L AD+ E L ALQT+QQL +QALS + ILSLFR
Sbjct: 481 QSGSGKLTLADLNEEGANLLALQTRQQLGIQALSFAGQNEKSILSLFR 528
>gi|332089658|gb|EGI94760.1| flagellin [Shigella boydii 5216-82]
Length = 428
Score = 95.6 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 50/143 (34%)
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
V + + + +S + T+A + + + +D
Sbjct: 286 YVEDGALSANATKDVTYFEQKNGAITNSTGGTIYETADGKLTTEATTASSSTADPLKALD 345
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
I +G++ +R+ + + + R+ DAD A+E + +S Q Q
Sbjct: 346 EAISSIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQ 405
Query: 430 QLAVQALSIVNNSTARILSLFRG 452
Q L+ N ++LSL +G
Sbjct: 406 QAGNSVLAKANQVPQQVLSLLQG 428
>gi|99080881|ref|YP_613035.1| flagellin-like [Ruegeria sp. TM1040]
gi|99037161|gb|ABF63773.1| Flagellar filament 33 kDa core protein (Class B) [Ruegeria sp.
TM1040]
Length = 292
Score = 95.6 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/195 (29%), Positives = 96/195 (49%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM+A + L+ IN NL VQ +S+G R+ A DN+A W+I++ M++D
Sbjct: 10 MSSILTNYGAMTALRTLKAINGNLNDVQTSISTGKRIGAAKDNSAVWAISKTMEADISGF 69
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
++ ++ LG + V +A AG + ++ ++ IK I + D +IQ++IT Q+
Sbjct: 70 RSIKSSLALGEATVAVASAGAEQIVEKLTEIKELIVSAQSENVDHDTIQTDITSKVDQIE 129
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FNG N L TD+ + A+ + G V + I LD +
Sbjct: 130 AIISAAQFNGANLLSTDVDGNGATSLGVLASLDRSGAGGTVTSSEISVASVNFDSSLDLA 189
Query: 181 TDGTERYGLLDRNHK 195
++ T
Sbjct: 190 SNLTAITDSTTAATA 204
Score = 76.7 bits (186), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/97 (40%), Positives = 58/97 (59%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ I+ ++ A A +GS +SRI Q DF+ + DA+E+GV + D D
Sbjct: 195 ITDSTTAATALTEIEDFLQVAINGAASLGSSASRIEDQSDFVGRLVDAMEQGVSAMTDTD 254
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
M S RLSAL+TQQ+LA+Q+L+I N S +L LFR
Sbjct: 255 MEEASARLSALKTQQELAIQSLTIANQSPRLLLELFR 291
>gi|259419098|ref|ZP_05743015.1| flagellin domain protein [Silicibacter sp. TrichCH4B]
gi|259345320|gb|EEW57174.1| flagellin domain protein [Silicibacter sp. TrichCH4B]
Length = 283
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/195 (30%), Positives = 91/195 (46%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTNH A A + L+ IN NL VQ+ +S+G R+ A DNAA WSIA+ M+SD
Sbjct: 1 MSSILTNHGAQIALRTLKTINGNLTDVQNSISTGKRIGSAKDNAAVWSIAKTMESDISGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
++ D + +G + V +A AG + ++ ++ IK I + D +IQ++I Q+
Sbjct: 61 RSIKDGLAMGEATVAVASAGAEQIVEKLTEIKELIVSAQSENVDHATIQTDIASKVEQVE 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FNG N L D+ S A+ + G V I LD +
Sbjct: 121 AIIAAAQFNGANLLSADVDGSGATSLGVLASLNRVGSGGTVTANEITVASVNFDNTLDLA 180
Query: 181 TDGTERYGLLDRNHK 195
+ T
Sbjct: 181 SSLTAITDSTSAATA 195
Score = 76.3 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 58/97 (59%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ++ I+ ++ A A +GS ++RI Q DF+ + D++E GV L D +
Sbjct: 186 ITDSTSAATALTEIEDFLQVAITGAASLGSSAARIEDQSDFVGRLMDSMELGVSALTDTN 245
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
M S RL+AL+TQQ+LA+Q+L+I N + +L LFR
Sbjct: 246 MEEASARLAALKTQQELAIQSLTIANQAPRLLLELFR 282
>gi|2208919|dbj|BAA20478.1| flagellin protein [Borrelia garinii]
Length = 292
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 2 NAANLSKTQEKLSSGYRINRASDDAAGMGVSGNINAQIRGLSQASRNTSKAINFIQTTEG 61
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 62 NLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 121
Query: 137 DLGSSTASIAK 147
S A+
Sbjct: 122 KSASQNVRTAE 132
Score = 51.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/176 (8%), Positives = 46/176 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 112 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 171
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 172 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 231
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E
Sbjct: 232 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEV 287
>gi|260439468|ref|ZP_05793284.1| putative flagellar protein [Butyrivibrio crossotus DSM 2876]
gi|292808096|gb|EFF67301.1| putative flagellar protein [Butyrivibrio crossotus DSM 2876]
Length = 311
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/355 (10%), Positives = 87/355 (24%), Gaps = 47/355 (13%)
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLRDIARGS 126
G S V A+ +++ D++ + G D IQ E+ QL ++ ++ +
Sbjct: 1 GISAVQTAEGALNEVQDMLQRMNELAVKAANGTNSEDDRNYIQDEVNQLIKEIDRVSTTT 60
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
FN L+ D ++ +V T + T T
Sbjct: 61 KFNETYLLKGDDATAATVADTAVDAGITGSATANPTFTIDFTGITAPTEGKSDVTINIAG 120
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
K ++ I ++ + T AT + + A A
Sbjct: 121 KSYSVTVEKGDDAAKIGDKIASAINNNKIVDDTAGEYEATNADGTITLTGAKKAAATTDL 180
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
+ + + + S
Sbjct: 181 SATANKDVTVKSSGILTLDLHVGADST--------------------------------- 207
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
D + + + T + + +
Sbjct: 208 -----------ADNQISVDIKQMSADVLGLKTGKSSTTAAENDTLLVNGSNDDNARKAID 256
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
I + ++ + +G+ +R+ + + + + D DMA+E +
Sbjct: 257 TIASALQEVSKQRSALGAAQNRLEHTIANLDNVVENTTSAESSIRDTDMATEMVK 311
>gi|90422385|ref|YP_530755.1| flagellin-like [Rhodopseudomonas palustris BisB18]
gi|90104399|gb|ABD86436.1| flagellin-like [Rhodopseudomonas palustris BisB18]
Length = 272
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/266 (17%), Positives = 89/266 (33%), Gaps = 3/266 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +A +A + L + ++SSG +++ A+D+AA +I+ + SD L
Sbjct: 1 MPVISTNTAANTAVRYLNVNSAQESSSLAKLSSGSKINKASDDAAGLAISTRISSDITTL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ SS + A G S D+++ +K+ T I SE TQL +
Sbjct: 61 QQAATNASQASSILQTADGGASNISDILARMKSLATQASSGTVTDDSRAYIDSEFTQLVA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA G+ ++ + L D + + + +
Sbjct: 121 EIDSIASGTRYSSTSLLNGDFTDTAIMVGTDSTDTITMSLANLTSTSLGFSTSSTIGTQT 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
++ T +D + + L+ D+ T + + AA
Sbjct: 181 AATAMLTTIDSAIDTVSGARADIGALESRFNFSADSISTQTENLEAANSAITDVDIAAEQ 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTS 263
A + + A
Sbjct: 241 AKLSASEVKVQAAVSAESAANQMPQY 266
Score = 74.0 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 55/134 (41%)
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
D T + D I + +T + + + A M++ ID+ I +
Sbjct: 138 NGDFTDTAIMVGTDSTDTITMSLANLTSTSLGFSTSSTIGTQTAATAMLTTIDSAIDTVS 197
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
A IG++ SR + D I + +E + D D+A+E +LSA + + Q AV A
Sbjct: 198 GARADIGALESRFNFSADSISTQTENLEAANSAITDVDIAAEQAKLSASEVKVQAAVSAE 257
Query: 437 SIVNNSTARILSLF 450
S N +L L
Sbjct: 258 SAANQMPQYLLKLL 271
>gi|312913794|dbj|BAJ37768.1| flagellin [Salmonella enterica subsp. enterica serovar Typhimurium
str. T000240]
Length = 112
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 42/108 (38%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS 110
S G S + +++ + + ++ + S
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDS 111
>gi|153011516|ref|YP_001372730.1| flagellin domain-containing protein [Ochrobactrum anthropi ATCC
49188]
gi|151563404|gb|ABS16901.1| flagellin domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 327
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 71/227 (31%), Positives = 104/227 (45%), Gaps = 1/227 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SILTN SA++A Q L N LE Q+R+S+GL+V+ A+DNAAYWSIA M+SDN A
Sbjct: 1 MASILTNSSALTALQTLSSTNKALESTQNRISTGLKVAGASDNAAYWSIATTMRSDNKAN 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI-TAGVERGTDSKSIQSEITQLQSQL 119
S V D++GLG+ KVD A M+KAI+V+ IK K+ A D IQSEI +QL
Sbjct: 61 SVVQDSLGLGAGKVDTAYTAMNKAIEVVDQIKQKVLLAKTSGAEDRAKIQSEIATYVAQL 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+D G+++ G N L +D TA + + N + +
Sbjct: 121 KDNVSGANYAGSNLLTSDSSKDTADPTATPAVAESNSLNVITSYNRDASGKVTTGTISVN 180
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + + + + + +
Sbjct: 181 YSTTRLIDSGTGTAAGVLDKNGGASAKSILDINVADLTGVTDYDATD 227
Score = 77.5 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 59/204 (28%), Positives = 95/204 (46%)
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
A + T+ + + P+ + N +T+ N +
Sbjct: 124 VSGANYAGSNLLTSDSSKDTADPTATPAVAESNSLNVITSYNRDASGKVTTGTISVNYST 183
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
++ ++ + +D + +T A A E A + +++ I
Sbjct: 184 TRLIDSGTGTAAGVLDKNGGASAKSILDINVADLTGVTDYDATDVAGTEGAAFDNLLTDI 243
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
+ + +A ++G+ +RI +Q+DF+ + D++EKGVG+LVDADM ES RLSALQ Q
Sbjct: 244 EAALGSMATSAAELGAAKARIDMQKDFVSSLSDSIEKGVGQLVDADMNKESARLSALQVQ 303
Query: 429 QQLAVQALSIVNNSTARILSLFRG 452
QQL VQALSI N+S ILSLFRG
Sbjct: 304 QQLGVQALSIANSSNQNILSLFRG 327
>gi|299822266|ref|ZP_07054152.1| flagellin [Listeria grayi DSM 20601]
gi|299815795|gb|EFI83033.1| flagellin [Listeria grayi DSM 20601]
Length = 291
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 66/202 (32%), Gaps = 3/202 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN ++ + LR N + Q+R++SG R++ + D+AA ++ M + + L
Sbjct: 3 VNTNIISLKTQEYLRKNNEGMNQAQERLASGKRINSSVDDAAGLAVVTRMNAKSTGLDTA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S G + A + +S ++ ++ D E L +L
Sbjct: 63 SKNSSQGVDLLQTADSALSSMTSILQRMRQLSVQASNGTFSTEDRGQYSKEFGSLIKELS 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A +++N N L + + + D + D + +
Sbjct: 123 HVADSTNYNNINLLDGSAATVAVQASDKANDTISIDLFDASALKDTDIAVTAVDAAGAET 182
Query: 181 TDGTERYGLLDRNHKIKVEPQV 202
Y L +
Sbjct: 183 AATVAGYEGLSVGTASDAQQAT 204
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 39/98 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ ID+ I + +G+ SR++ + A ++ + DAD
Sbjct: 194 VGTASDAQQATQAIDSLINSISDGRAVLGAGMSRLNYNISNVNSQSIATKQSASSIQDAD 253
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
MA+E + + + Q ++ LS N + + L G
Sbjct: 254 MAAEMSEQTKYKILTQTSISMLSQANQTPQMLTQLING 291
>gi|255613362|ref|XP_002539503.1| conserved hypothetical protein [Ricinus communis]
gi|223505568|gb|EEF22881.1| conserved hypothetical protein [Ricinus communis]
Length = 157
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 84/139 (60%), Positives = 103/139 (74%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN+SAMSA Q LR++N NL Q+ VSSGLRV AADNAAYWSIA MKSDN AL
Sbjct: 1 MTSILTNNSAMSALQTLRNVNQNLSDTQNHVSSGLRVGKAADNAAYWSIATTMKSDNKAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AVSDA+G+G++KVD A + +IDV+S IK+K+ A E G D +Q EITQLQ+QL+
Sbjct: 61 GAVSDALGMGAAKVDTAYTAVESSIDVVSEIKSKLVAATEDGVDKSKVQDEITQLQAQLK 120
Query: 121 DIARGSSFNGENWLRTDLG 139
I+ +SFNGENW+ G
Sbjct: 121 SISSSASFNGENWVANTAG 139
>gi|218510859|ref|ZP_03508737.1| flagellin C protein [Rhizobium etli Brasil 5]
Length = 177
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/136 (37%), Positives = 77/136 (56%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
T + S + V + + + + ++ +S I+ +
Sbjct: 41 GMTSTGAIETSSGIIGTAFNGTYGGTVIVMPSIYDLDITGFTQGQLDAALSGIELVLGAM 100
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
TAA +GSIS+RI LQE+F+ + D+++ G+GRLVDADM ES++LSALQTQQQL +Q+
Sbjct: 101 TAAGSALGSISTRIQLQENFVSGLHDSIDSGIGRLVDADMEEESSKLSALQTQQQLGIQS 160
Query: 436 LSIVNNSTARILSLFR 451
LSI N+S IL+LFR
Sbjct: 161 LSIANSSAQNILTLFR 176
>gi|254250919|ref|ZP_04944237.1| Flagellin [Burkholderia dolosa AUO158]
gi|124893528|gb|EAY67408.1| Flagellin [Burkholderia dolosa AUO158]
Length = 274
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 71/185 (38%), Gaps = 3/185 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +I TN +++ L L +R+SSG RV+ AAD+AA +IA + AL
Sbjct: 1 MLNINTNILSLTTQTNLSGSQNALSQAINRLSSGKRVNTAADDAAGLAIATSQTAAINAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQS 117
+ G S + A + +D + I+ G ++QSE+T
Sbjct: 61 TQGVSNANNGISMIQTAAGALQSTVDNLQRIRTLAVEAGDGSLDSNARANLQSEVTTRLG 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +A +SFNG+ L + A + + T L +V
Sbjct: 121 EIDRVATQTSFNGQTILSAAGNVTFQVGAAANQTVSVDFGATVWTSTGTGLSLTGLSVSD 180
Query: 178 DSSTD 182
+S
Sbjct: 181 QTSAQ 185
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 41/97 (42%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+++ + + ++ ID +K +G+ + + + ++ DAD
Sbjct: 178 VSDQTSAQSAITAIDAALKNVNTFQATLGAAQNTFQAAITTTQTQATNMSAARAQITDAD 237
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+E+ LS Q QQ + L+ N+ ++L L +
Sbjct: 238 FATETANLSKAQVLQQAGISVLAQANSLPQQVLKLLQ 274
>gi|5668684|dbj|BAA82634.1| flagellin protein [Borrelia sinica]
Length = 319
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 3/131 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA +++ + + LS S + + +
Sbjct: 2 NAANLSKTQEKLSSGHRINRASDDAAGMAVSGKINAQIRGLSQASRNTSKAINFIQTTEG 61
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 62 NLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 121
Query: 137 DLGSSTASIAK 147
S A+
Sbjct: 122 KSASQNVRTAE 132
Score = 83.3 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 22/208 (10%), Positives = 58/208 (27%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 112 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 171
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ T T + + + +
Sbjct: 172 IYAANVANLFAGEGAQTTQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 231
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E +
Sbjct: 232 SLAKIENAIRMVSDQRSNLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAAT 291
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+ ++ N +LSL R
Sbjct: 292 TNSILTQSAMAMIAQANQVPQYVLSLLR 319
>gi|315180467|gb|ADT87381.1| lateral flagellin LafA [Vibrio furnissii NCTC 11218]
Length = 279
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 81/220 (36%), Gaps = 3/220 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN++ + L +N L +R+S+GLR++ AAD+AA IA +++ + +S
Sbjct: 4 SLHTNYANLVTQNNLNSVNKALTTSMERLSTGLRINSAADDAAGLQIANRLEAQSRGMSV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S + A+ M + ++ +K+ T D ++QSE L QL
Sbjct: 64 GMRNSQDAISMMQTAEGSMDEMTNMAYRMKDLATQAANGTNSDEDIAAMQSEFEALAGQL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ ++F G+ L T A IG+ D + T +
Sbjct: 124 GKMQTSTNFGGQQLLGTGGAFGAAGGVTFQIGAASSDTLTVNVSGELATLSGSITDFATA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
D + D + I + + I+
Sbjct: 184 KLDTDTGDIMDDLDSFIGDLGAARSAFGAQINNLEHNINN 223
Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 38/93 (40%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+++ +D+ I AA G+ + + + + M + V+ GR++D D A
Sbjct: 186 DTDTGDIMDDLDSFIGDLGAARSAFGAQINNLEHNINNLANMVENVDASKGRIMDTDFAK 245
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
ES +S Q Q Q LS +S+
Sbjct: 246 ESGVMSKNQMLMQAGAQMLSATKMMPQLAMSML 278
>gi|65319040|ref|ZP_00391999.1| COG1344: Flagellin and related hook-associated proteins [Bacillus
anthracis str. A2012]
Length = 278
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 3/167 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + V +R+SSG R++ AAD+AA +IA M++ L S G
Sbjct: 1 MRTQEYMRQNQDKMNVSMNRLSSGKRINSAADDAAGLAIATRMRARQSGLEKASQNTQDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + A++ M+ ++++ +++ + ++Q E +LQ Q+ IA+ +
Sbjct: 61 MSLIRTAESAMNSVSNILTRMRDIAVQSSNGTNTAENQSALQKEFAELQEQIDYIAKNTE 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
FN +N L + S + S I + I L T
Sbjct: 121 FNDKNLLAGTGAVTIGSTSISGAEISIETLDSSATNQQITIKLANTT 167
Score = 82.9 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 33/83 (39%)
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
+T + +G+ +R+ + + + ++ DADMA E + ++ +
Sbjct: 196 NTALNTVAGNRATLGATLNRLDRNVENLNNQATNMASAASQIEDADMAKEMSEMTKFKIL 255
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
+ + LS N + + L +
Sbjct: 256 NEAGISMLSQANQTPQMVSKLLQ 278
>gi|332703241|ref|ZP_08423329.1| flagellin domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332553390|gb|EGJ50434.1| flagellin domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 299
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 25/204 (12%), Positives = 60/204 (29%)
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
+ + + + S + ++
Sbjct: 96 ATQASTGTYNSDQRLIIDSEYQAMASEITRIASATDFNGVYLLNGNLSGANSTHDGSALA 155
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ ++ + D + V L A + + + ++ + I
Sbjct: 156 STGPLKVHFGTGNDSAEDYYYIAIGNSTASALQVGLGAGATAAGASISTQENAQKALEAI 215
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
++ I +G++ +R+ +++ + ++ R+ D D+ASE T Q
Sbjct: 216 NSAIISKDKIRANLGALQNRLENTVSNLQIQAENLQAAESRISDVDVASEMTEFVRQQIL 275
Query: 429 QQLAVQALSIVNNSTARILSLFRG 452
Q AV LS N+ + L G
Sbjct: 276 SQSAVAMLSQANSLPRMAMQLIGG 299
Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 3/141 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I N A +A++ L NL V R+SSGLRV AAD+AA + ++M++D +L+
Sbjct: 3 LTINHNLMATNAARNLSSSYSNLSVSTRRLSSGLRVGTAADDAAGLASRELMRADISSLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQ 118
S + A G+ + + +K T I SE + S+
Sbjct: 63 QGVRNANDAISLIQTADGGLQVIDEKLIRMKELATQASTGTYNSDQRLIIDSEYQAMASE 122
Query: 119 LRDIARGSSFNGENWLRTDLG 139
+ IA + FNG L +L
Sbjct: 123 ITRIASATDFNGVYLLNGNLS 143
>gi|307748215|gb|ADN91485.1| Flagellin A [Campylobacter jejuni subsp. jejuni M1]
Length = 303
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/276 (12%), Positives = 70/276 (25%)
Query: 176 LLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
D + + + V IS + +
Sbjct: 28 SADGRGIKITGDIGVGSGILANQKENYGRLSLVKNDGRDINISGTNLSAIGMGTTDMISQ 87
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
++ + A G + SA G+ +
Sbjct: 88 SSVSLRESKGQISATNADAMGFNSYKGGGKFVFTQNVSSISAFMSAQGSGFSRGSGFSVG 147
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
S + + + + + +T + S ++ T T
Sbjct: 148 SGKNLSVGLSQGIQIISSAASMSNTYVVSAGSGFSSGSGNSQFAALKTTAANTTDETAGV 207
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
++ +T I IGS+ +++ + + I + + V+ + D D
Sbjct: 208 TTLKGAMAVMDIAETAITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDF 267
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ASES S Q A+S N +L L +
Sbjct: 268 ASESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 303
>gi|171320230|ref|ZP_02909288.1| flagellin domain protein [Burkholderia ambifaria MEX-5]
gi|171094519|gb|EDT39575.1| flagellin domain protein [Burkholderia ambifaria MEX-5]
Length = 274
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 71/185 (38%), Gaps = 3/185 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +I TN +++ L L +R+SSG RV+ AAD+AA +I+ S AL
Sbjct: 1 MLNINTNILSLTTQTNLSGSQSALSQAINRLSSGKRVNTAADDAAGLAISTTQTSAINAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A + +D + I+ + ++Q+E+T
Sbjct: 61 TQGVSNANNGISMIQTAAGALQSTVDNLQRIRTLAVESGDGSLDSNARANLQAEVTTRLG 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +A ++FNG+ L + A + + T L TV
Sbjct: 121 EIDRVATQTTFNGQTILSNAGNVTFQVGASANQTVAVNFGATVWTSTGAGLSLSGLTVSD 180
Query: 178 DSSTD 182
+S
Sbjct: 181 QTSAQ 185
Score = 83.3 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 42/97 (43%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+++ + + ++ IDT +K +G+ + + + ++ DAD
Sbjct: 178 VSDQTSAQSAITAIDTALKNVNTFQATLGAAQNTFQAAITTTQTQATNMSAARSQITDAD 237
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+E+ LS Q QQ + L+ N+ ++L L +
Sbjct: 238 FATETANLSKAQVLQQAGISVLAQANSLPQQVLKLLQ 274
>gi|14861492|gb|AAK73696.1| flagellin A [Campylobacter jejuni]
gi|14861494|gb|AAK73697.1| flagellin A [Campylobacter jejuni]
Length = 194
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 73/193 (37%), Gaps = 3/193 (1%)
Query: 9 SAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
+A++A + +L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 1 AALNAKANADLNSKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAISNGN 60
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARG 125
+ A M + + ++ TIK K T + G +Q++I +L +L +IA
Sbjct: 61 DALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANT 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+SFNG+ L + + I S + + + S
Sbjct: 121 TSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSGEVQFT 180
Query: 186 RYGLLDRNHKIKV 198
+
Sbjct: 181 LKNYNGIDDFQFQ 193
>gi|259418828|ref|ZP_05742745.1| flagellin domain protein [Silicibacter sp. TrichCH4B]
gi|259345050|gb|EEW56904.1| flagellin domain protein [Silicibacter sp. TrichCH4B]
Length = 282
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/181 (29%), Positives = 88/181 (48%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ +N +L Q +S+G V A DN+A W+I++ M+SD
Sbjct: 1 MSSILTNNGAMVALQTLKSVNDDLGKTQTSISTGKEVGTAKDNSAVWAISKTMESDIAGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
A+ + + +G + V +A AG + ++ ++ +K I + D +IQ++I Q+
Sbjct: 61 EAIEEGLSVGEATVAVASAGAEQIVEKLTEMKELIVSAQSENVDHATIQTDIDSKVEQVE 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FNG N L TD+ + A+ + G V I LD
Sbjct: 121 AIISAAQFNGANLLATDVDGNGATGVGVLASLDRVGAGGAVSAVEITIASVDFEADLDFG 180
Query: 181 T 181
T
Sbjct: 181 T 181
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 53/87 (60%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ I+ I+ A A +G+ S+R+ Q +F+ + D++ GV + D +M S RLSA
Sbjct: 196 LDEIEVLIQTAITGAASLGADSARLEDQSEFVSNLVDSMTMGVSTMTDTNMEEASARLSA 255
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
LQTQQ LA Q+L+I N + + +L LFR
Sbjct: 256 LQTQQDLATQSLTIANEAPSSLLQLFR 282
>gi|218507707|ref|ZP_03505585.1| flagellin C protein [Rhizobium etli Brasil 5]
Length = 222
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/138 (35%), Positives = 79/138 (57%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ S + + + ++ + + + ++ I+ ++
Sbjct: 84 DTSSSGNVLFGMTSTGTIDTSAGIIGTSYGTIGSIYSMDISTFGSVEISMALTSIEAGLE 143
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
T AA ++GSIS+RI LQE+F+ + D+++ GVGRLVDADM ES++L+ALQTQQQLA+
Sbjct: 144 AMTKAASQLGSISTRIELQENFVGALSDSIDSGVGRLVDADMEEESSKLTALQTQQQLAI 203
Query: 434 QALSIVNNSTARILSLFR 451
Q+LSI N+S IL+LFR
Sbjct: 204 QSLSIANSSAQNILTLFR 221
>gi|146296675|ref|YP_001180446.1| flagellar hook-associated protein FlgL [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410251|gb|ABP67255.1| flagellar hook-associated protein 3 [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 315
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 57/161 (35%), Gaps = 3/161 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + L L+ +Q ++++G ++ +D+ + + +++D + +
Sbjct: 3 ITNNMMVNNFLINLNKNLNRLDDIQYKMATGKKIRYPSDDPVVTARSLRLRTDVSEIEQL 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ S VD ++ ++ + + ++ G D I E+ Q++ +
Sbjct: 63 QKNVDDAMSWVDTTESALADINESLQRVRELAVRGANGTNTKEDMAQIAKEVAQIKQHII 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV 161
I + + ++ + S + NG
Sbjct: 123 QIGNTNYAGRYIFSGFKTDTAPLNSDGSFSDTGNFASNGGY 163
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 28/66 (42%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + ++S ID I A G +G++ +R+ L ++ + + D DMA
Sbjct: 222 DVTTVNSLLSDIDRHIDNVVAQRGDVGALQNRLELIKNRLSDENVNFTTLLSNNEDVDMA 281
Query: 417 SESTRL 422
+L
Sbjct: 282 EIIMQL 287
>gi|315180464|gb|ADT87378.1| lateral flagellin LafA [Vibrio furnissii NCTC 11218]
Length = 278
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/268 (13%), Positives = 82/268 (30%), Gaps = 3/268 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN++ + L +N L +R+S+GLR++ AAD+AA IA +++ + +S
Sbjct: 4 SLHTNYANLVTQNNLNSVNKALTTSMERLSTGLRINSAADDAAGLQIANRLEAQSRGMSV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQL 119
S + A+ M + ++ +K+ T D ++QSE L QL
Sbjct: 64 GMRNSQDAISMMQTAEGSMDEMTNMAYRMKDLATQAANGTNSAEDIAAMQSEFEALAGQL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ ++F G++ L + + V ++ +
Sbjct: 124 GKMQTSTNFGGKSLLGASGAFGAGGVTFQIGAGANDTLAVDVSTQIKAVETTVTSLGSAA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + +
Sbjct: 184 LATNASTVMGQLDTFIGDLGAARSAFGAQINNLEHNINNLANMVENVDASKGRIMDTDFA 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSG 267
++ ++ + + A + T
Sbjct: 244 KESGVMSKNQMLMQAGAQMLSATKMMPQ 271
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/205 (13%), Positives = 58/205 (28%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
+ + + N + + + + + A
Sbjct: 73 SMMQTAEGSMDEMTNMAYRMKDLATQAANGTNSAEDIAAMQSEFEALAGQLGKMQTSTNF 132
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ +G + + T + + T + + ++
Sbjct: 133 GGKSLLGASGAFGAGGVTFQIGAGANDTLAVDVSTQIKAVETTVTSLGSAALATNASTVM 192
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+DT I AA G+ + + + + M + V+ GR++D D A ES +S
Sbjct: 193 GQLDTFIGDLGAARSAFGAQINNLEHNINNLANMVENVDASKGRIMDTDFAKESGVMSKN 252
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
Q Q Q LS +S+
Sbjct: 253 QMLMQAGAQMLSATKMMPQLAMSML 277
>gi|229153715|ref|ZP_04281871.1| Flagellin [Bacillus cereus m1550]
gi|228629751|gb|EEK86423.1| Flagellin [Bacillus cereus m1550]
Length = 182
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 20/170 (11%), Positives = 48/170 (28%)
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
G D + + + G + + ++
Sbjct: 13 NGGKDQDSLDLEFQELHKEIDHIAEKTNFNGKNLLAATGANIDIQLSDVSGDKLTITSID 72
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ A A ++ +D I+ GS +R+ + +
Sbjct: 73 AKADNLLTAAGTNVKTSAAASTAITNLDKAIQTVADNRATFGSQLNRLDHNLNNVTSQAT 132
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ DADMA E + ++ + + + LS N + + L +
Sbjct: 133 NMAAAASQIEDADMAKEMSNMTKFKILNEAGISMLSQANQTPQMVSKLLQ 182
>gi|77165831|ref|YP_344356.1| flagellin-like [Nitrosococcus oceani ATCC 19707]
gi|254433202|ref|ZP_05046710.1| flagellar hook-associated protein 3 [Nitrosococcus oceani AFC27]
gi|76884145|gb|ABA58826.1| Flagellin-like protein [Nitrosococcus oceani ATCC 19707]
gi|207089535|gb|EDZ66806.1| flagellar hook-associated protein 3 [Nitrosococcus oceani AFC27]
Length = 400
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/437 (10%), Positives = 112/437 (25%), Gaps = 53/437 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ + + + Q +++SG R+ AD+ + ++ +G +
Sbjct: 3 ISTSLFQQQSIDGMLRQQAQVSKTQQQIASGERMQTPADDPIAAARLLEVREASGRTAQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
++++ + ++ +V+ ++ + I E+ Q ++L
Sbjct: 63 QTNADRATARLSQEENALAGVNNVLQGVRELAVQANNGAQNNENRAIIAQEVRQRLNELV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A +GE G S I + S+ D ++ + +
Sbjct: 123 GLANSQDASGEYLFAGAKGRSQPFIQEGGSVSYQGDQAQRLISIGPSVQVADSHSGSEVF 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
E G+ + T +F AT + +
Sbjct: 183 LAIREGNGVFATEANPSNTGSGVIAPGSVNGAFIPDNYTLQFSQATPDDPLTYQVLDSQN 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
Sbjct: 243 TVVANGGFASGEEITFGGAQ---------------------------------------- 262
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
V T D +S TL + + + + L +
Sbjct: 263 ----------VSITGIPADGDSFTLHASAHRDMFTIAQHFIEALERPINDTASQARFHND 312
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
M ++ +D + ++G+ + + + + + + L D D+A
Sbjct: 313 MNRALTDLDQAMGKILEVRTEVGTRLNAVDRERQVNEEASLQLAREQSSLNDLDLAEAIG 372
Query: 421 RLSALQTQQQLAVQALS 437
RL+ T + A + +
Sbjct: 373 RLNQQLTGLEAAQRTYA 389
>gi|260892171|ref|YP_003238268.1| flagellar hook-associated protein 3 [Ammonifex degensii KC4]
gi|260864312|gb|ACX51418.1| flagellar hook-associated protein 3 [Ammonifex degensii KC4]
Length = 296
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 25/202 (12%), Positives = 68/202 (33%), Gaps = 3/202 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN + + L + Q+ ++SG R++ +D+ A +++
Sbjct: 3 VTTNMLVTNFLRNLNSRLDQIAKRQEELASGRRLNRPSDDPTGVMSALRLRAQLAENQQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ ++ +A + A+ + ++ AG +++ E+ +L+ L
Sbjct: 63 HKNMADAVDWLNATEAALRDALATVQRVRELAVAGASDALPQGAREALAQEVEELKEHLG 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA + + T S + T L E + ++
Sbjct: 123 NIANTTYGGRYIFAGTRTDLPPYSNGSLQSYPGGIEYEIAPATTIKVNTLSSEAFSVPNA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQV 202
T + + +L++ + +
Sbjct: 183 TANKDIFEVLNQLSSDLRDGKT 204
Score = 42.8 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 30/79 (37%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + + +D I ++G+ R+ + + ++ + + + + DADMA
Sbjct: 204 TQDISNQRLQELDQSIDNLLKVLAEVGAKVKRLEMGMERLETNEADLTRLLSQTEDADMA 263
Query: 417 SESTRLSALQTQQQLAVQA 435
L + + A+
Sbjct: 264 RTIVDLKTQENVYRAALAV 282
>gi|259419018|ref|ZP_05742935.1| flagellin protein [Silicibacter sp. TrichCH4B]
gi|259345240|gb|EEW57094.1| flagellin protein [Silicibacter sp. TrichCH4B]
Length = 280
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 80/146 (54%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ +N +L Q +S+G V A DN+A W+I++ M+SD
Sbjct: 1 MSSILTNNGAMVALQTLKSVNDDLSKTQTSISTGKEVGSAKDNSAVWAISKTMESDIAGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
A+ + + +G + V +A AG + ++ ++ +K I + D + IQ++IT Q+
Sbjct: 61 EAIEEGLSIGEATVAVASAGAEQIVEKLTEMKELIVSAQSENVDHEKIQTDITSKVEQIT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I + FNG N L+ + + +
Sbjct: 121 SIIDAAQFNGANLLKATVDGTATGLG 146
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 57/102 (55%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
+ + + + I+T ++ A A +G+ ++R+ Q +F+ + D++ GV
Sbjct: 179 GSMTQITDSASAASALGEIETYLQTAITGAASLGADAARLEDQSEFVSNLVDSMTLGVST 238
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D +M S RLSALQTQQ LA Q+L+I N + + +L LFR
Sbjct: 239 MTDTNMEEASARLSALQTQQDLATQSLTIANEAPSSLLQLFR 280
>gi|115350212|ref|YP_772051.1| flagellin [Burkholderia ambifaria AMMD]
gi|170698740|ref|ZP_02889805.1| flagellin domain protein [Burkholderia ambifaria IOP40-10]
gi|115280200|gb|ABI85717.1| flagellin domain protein [Burkholderia ambifaria AMMD]
gi|170136365|gb|EDT04628.1| flagellin domain protein [Burkholderia ambifaria IOP40-10]
Length = 274
Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 71/185 (38%), Gaps = 3/185 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +I TN +++ L L +R+SSG RV+ AAD+AA +I+ + AL
Sbjct: 1 MLNINTNILSLTTQTNLSGSQSALSQAINRLSSGKRVNTAADDAAGLAISTTQTAAINAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A + +D + I+ + ++Q+E+T
Sbjct: 61 TQGVSNANNGISMIQTAAGALQSTVDNLQRIRTLAVESGDGSLDSNARANLQAEVTTRLG 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +A ++FNG+ L + A + + T L TV
Sbjct: 121 EIDRVATQTTFNGQTILSNAGNVTFQVGASANQTVAVNFGATVWTSTGAGLSLSGLTVSD 180
Query: 178 DSSTD 182
+S
Sbjct: 181 QTSAQ 185
Score = 83.3 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 42/97 (43%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+++ + + ++ IDT +K +G+ + + + ++ DAD
Sbjct: 178 VSDQTSAQSAITAIDTALKNVNTFQATLGAAQNTFQAAITTTQTQATNMSAARSQITDAD 237
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+E+ LS Q QQ + L+ N+ ++L L +
Sbjct: 238 FATETANLSKAQVLQQAGISVLAQANSLPQQVLKLLQ 274
>gi|326202858|ref|ZP_08192725.1| flagellar hook-associated protein 3 [Clostridium papyrosolvens DSM
2782]
gi|325986935|gb|EGD47764.1| flagellar hook-associated protein 3 [Clostridium papyrosolvens DSM
2782]
Length = 309
Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/274 (12%), Positives = 82/274 (29%), Gaps = 4/274 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + L + + Q+++ +G ++ +D+ + A +++D +
Sbjct: 3 ITNNMLISNMLTALGNNESRMSKYQNQLYTGKKIQLPSDDPIVAARALKLRTDVSKIEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+G S VD A +++ +++ K T +++ I E+ QL+ QL
Sbjct: 63 QKNLGDAQSWVDATDAALAQIGNILKRAKELSTQAANGTNSSSETGDIGQEMKQLKVQLV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA S+++G F + G + + E ++ +
Sbjct: 123 HIA-NSTYSGRYMFSGFQTDQKLIEDDETSTDFGKFKIGVNIVPEKIQFEIGEGDNININ 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + + +V SG + + +L D
Sbjct: 182 VTGGDVFNSGSNAVYGNEPSMIALFTNVIADLDSGNNTGVRNQLDKFDEQVDNLLRVRAD 241
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
I + + +
Sbjct: 242 IGARQNRIDLSADRMSNDLVNMTDLMSKNEDADP 275
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 33/120 (27%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
++ T D + + T + + D Q+
Sbjct: 175 GDNININVTGGDVFNSGSNAVYGNEPSMIALFTNVIADLDSGNNTGVRNQLDKFDEQVDN 234
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
IG+ +RI L D + + + + DAD A L + Q ++
Sbjct: 235 LLRVRADIGARQNRIDLSADRMSNDLVNMTDLMSKNEDADPAETIMNLKMEENVYQASLA 294
>gi|118402732|emb|CAI26494.1| A-type flagellin [Pseudomonas aeruginosa]
Length = 307
Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 40/124 (32%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
S + + + + + V ID IK
Sbjct: 184 ADGTTSAVSGVAITDTGSTGAGTAAGTTTFTEANDTVAKIDISTAKGAQSAVLVIDEAIK 243
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + +K + + V GR+ D D A+E+ L+ Q QQ
Sbjct: 244 QIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDFAAETANLTKNQVLQQAGT 303
Query: 434 QALS 437
L+
Sbjct: 304 AILA 307
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/197 (9%), Positives = 52/197 (26%), Gaps = 3/197 (1%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDI 122
G S A+ + ++ +++ +++ ++ ++ E+ QLQ +L I
Sbjct: 1 NANDGISLAQTAEGALQQSTNILQRMRDLSLQSANGSNSDSERTALNGEVKQLQKELDRI 60
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ ++F G L G ++ + + + + Y ++
Sbjct: 61 SNTTTFGGRKLLDGSFGVASFQVGSAANEIISVGIDEMSAESLNGTYFTATGGGAVTAAT 120
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + + + + A +
Sbjct: 121 ASGTVDIAIGITGGSAVNVKVDMKGNETAEQAAAKIAAAVNDANVGIGAFTDGAQISYVS 180
Query: 243 KGIATIPVPLPAAPAAP 259
K A + A
Sbjct: 181 KASADGTTSAVSGVAIT 197
>gi|218512554|ref|ZP_03509394.1| flagellin C protein [Rhizobium etli 8C-3]
Length = 273
Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/106 (48%), Positives = 75/106 (70%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ +A ++ ++ +++ +K T+A +GSIS RI LQE+F+ + D+++ G
Sbjct: 168 SIYAMDITNFTLGQIQTALTNVESALKSMTSAGAALGSISKRIELQENFVNALSDSIDSG 227
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
VGRLVDA+M ES++LSALQTQQQLAVQ+LSI N+S+ ILSLFRG
Sbjct: 228 VGRLVDANMEEESSKLSALQTQQQLAVQSLSIANSSSQTILSLFRG 273
Score = 74.8 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 97/196 (49%)
Query: 31 VSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMST 90
VSSG RV A+DNAAYWSIA M+SDN ALSAVSDA+G+G++KVD A M AIDV+
Sbjct: 2 VSSGYRVEKASDNAAYWSIATTMRSDNKALSAVSDALGMGAAKVDTAYTAMDSAIDVVGD 61
Query: 91 IKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVI 150
IK K+ A E G D +Q EI QLQ QL+ IA+ +SFNGENW+ G+ + +
Sbjct: 62 IKAKLVAATENGVDKAKVQEEIGQLQEQLKSIAQSASFNGENWVAGANGTKSVVSSFVRD 121
Query: 151 GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
GS + + L + + + + + + + +
Sbjct: 122 GSNAVSVTTTDYVLDSGSAGNVLFGLSNGAVETSTGILGTSNGATGSIYAMDITNFTLGQ 181
Query: 211 YDASGTISTKKFKLAT 226
+ T K T
Sbjct: 182 IQTALTNVESALKSMT 197
>gi|157101672|gb|ABV23542.1| flagellin B [Bacillus thuringiensis serovar alesti]
Length = 285
Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 64/179 (35%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 8 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 67
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + + +++ +++ T D S+ E L +
Sbjct: 68 ARNTQDAMSALRTGDTALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQGIN 127
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA ++ NG +L + D I T V D
Sbjct: 128 HIADKTNSNGNAFLNKGTNPDEGKDITIQLSDASSDTMIIAAIETKKLTTATLAVSTDG 186
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 35/84 (41%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+DT I+ A GS +R+ + + + ++ DADMA E + ++ +
Sbjct: 202 LDTAIQNIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKI 261
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
+ + LS N + + L +
Sbjct: 262 LNEAGISMLSQANQTPQMVSKLLQ 285
>gi|78485794|ref|YP_391719.1| flagellin-like [Thiomicrospira crunogena XCL-2]
gi|78364080|gb|ABB42045.1| Flagellin [Thiomicrospira crunogena XCL-2]
Length = 287
Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 38/87 (43%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
VS +D + G++ +R+ + + + ++ R+ DAD A ES L+
Sbjct: 201 VSKLDVVMSKMNLQRASWGALQNRLESTVSNLSNVNENIQGARSRIEDADFAKESANLAR 260
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ + LS N + ++ L +
Sbjct: 261 TQVLQQAGMSMLSQANQQSQNVMQLLQ 287
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +A++A++ L + + + +R++SG R++ AAD+AA +I M +
Sbjct: 4 VINTNMAAINANRILSNTTIDQQTAMERLTSGKRINGAADDAAGLAITTKMTTQVMGTDM 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
G +K+ A + +++ ++ + + +Q E + LQ ++
Sbjct: 64 AIRNANDGIAKIQTADGASEEITNMLQRMRELGVQALNGTYSTGNRTQMQEEFSALQEEI 123
Query: 120 RDIARGSSFNGENWLRTDL 138
IA+ + FNG N L +
Sbjct: 124 DRIAQTTKFNGVNLLNSAA 142
>gi|118589974|ref|ZP_01547378.1| flagellin-like protein [Stappia aggregata IAM 12614]
gi|118437471|gb|EAV44108.1| flagellin-like protein [Stappia aggregata IAM 12614]
Length = 296
Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 70/137 (51%), Positives = 95/137 (69%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
TN SAM+A Q LR+ + NL Q+R+S+G RV+ A DNAAYWSIA M+SDN ALSAV D
Sbjct: 2 TNASAMTALQTLRNTSANLAETQNRISTGYRVAGAEDNAAYWSIATTMRSDNMALSAVED 61
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
++GLG++ VD+ M +DVM+ IK+K+ A G D IQS+I +LQ+QL+ A
Sbjct: 62 SLGLGAATVDVMYTAMDSTVDVMNEIKSKLVAARTPGVDRGKIQSDINELQNQLKSTAES 121
Query: 126 SSFNGENWLRTDLGSST 142
+ FNGENWL +D+ + T
Sbjct: 122 AVFNGENWLSSDVSTVT 138
Score = 73.2 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 48/97 (49%), Positives = 66/97 (68%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +E M+S +D + T +A +GS R+ LQ+DF+ + D++++GVG+LVDAD
Sbjct: 200 AADLTTLEGMISDVDEALGLITDSATLLGSTKKRVDLQKDFVSALIDSIDRGVGQLVDAD 259
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
M ESTRL ALQTQQQL +QALSI N + ILSLFR
Sbjct: 260 MNKESTRLQALQTQQQLGIQALSIANQGSQNILSLFR 296
>gi|186477735|ref|YP_001859205.1| flagellin [Burkholderia phymatum STM815]
gi|184194194|gb|ACC72159.1| flagellin domain protein [Burkholderia phymatum STM815]
Length = 272
Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/230 (17%), Positives = 89/230 (38%), Gaps = 3/230 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +I TN ++++A L L +R+SSG RV+ AAD+AA +I+ + AL
Sbjct: 1 MLNINTNIASLTAQNNLSGSQSALSQAINRLSSGKRVNTAADDAAGLAISTTQTASINAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQS 117
+ + G S V + +D + I+ + DS ++QSE++ +
Sbjct: 61 TQGAANANNGISMVQTTNGALQSIVDNLQRIRQLAVEAGDGSLDSNALANLQSEVSTRLT 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +A+ ++FNG+ L + A + + K ++ +
Sbjct: 121 EITRVAQQTTFNGQAVLNGIGSVNFQIGAFNGQQITANFGSQKWDSGSLGVSGVSVSTAS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+ + +L + + ++ + + T +T +
Sbjct: 181 GAQAAMSTIDTVLTSVNTFQATLGATQNTFQAAISTTQTQATNMSAARSQ 230
Score = 84.4 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 44/115 (38%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ S + + + + + + +S IDT + +G+ +
Sbjct: 158 NFGSQKWDSGSLGVSGVSVSTASGAQAAMSTIDTVLTSVNTFQATLGATQNTFQAAISTT 217
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + ++ DAD A+E+ LS Q QQ + L+ N+ ++L L +
Sbjct: 218 QTQATNMSAARSQITDADFATETANLSKAQVLQQAGISVLAQANSMPQQVLKLLQ 272
>gi|313620076|gb|EFR91586.1| flagellin [Listeria innocua FSL S4-378]
gi|313624719|gb|EFR94672.1| flagellin [Listeria innocua FSL J1-023]
Length = 115
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 46/111 (41%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN ++ + LR N + Q+R++SG R++ + D+AA ++ M + L A
Sbjct: 3 VNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQ 114
S +G + A + +S ++ ++ + + +
Sbjct: 63 SKNSSMGIDLLQTADSALSSMSSILQRMRQLAVQSSNGSFSDEDRKQYTAE 113
>gi|83858825|ref|ZP_00952347.1| flagellin FljN [Oceanicaulis alexandrii HTCC2633]
gi|83853648|gb|EAP91500.1| flagellin FljN [Oceanicaulis alexandrii HTCC2633]
Length = 274
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +I TN AM A Q L N +L+ VQ R+++GL +S A DN ++IAQ M++D
Sbjct: 1 MATINTNPGAMIALQNLNKTNMDLQQVQQRINTGLAISSAKDNGGVFAIAQSMRADVAGY 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
SAVS ++ L S VD+A A D+M +K K A + ++ + L+
Sbjct: 61 SAVSQSLDLAQSTVDVALAAGEAISDLMVEMKEKALASKDASLDTASRNALNEDFKALRD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAK 147
Q+ I + FNG N + TA
Sbjct: 121 QIGTIVANAEFNGTNLIANGASDITALANA 150
Score = 80.6 bits (196), Expect = 6e-13, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 79/203 (38%)
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
A A + K ++A+ + + + N+
Sbjct: 72 STVDVALAAGEAISDLMVEMKEKALASKDASLDTASRNALNEDFKALRDQIGTIVANAEF 131
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ ++ I + +T N A V+ I
Sbjct: 132 NGTNLIANGASDITALANADGSNTITIGAEDLSLTGGTLSIGTATEINSVAAASTAVAAI 191
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
+ + +A ++G+ S + + F+ + DA+EKG+G LVDAD+A ES RL +LQ +
Sbjct: 192 EAGLDTLNSALARLGTGSKSLEIHSTFVTKLSDALEKGIGNLVDADLAKESARLQSLQVK 251
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQL QALSI N++ + ILS FR
Sbjct: 252 QQLGTQALSIANSAPSSILSYFR 274
>gi|261420581|ref|YP_003254263.1| flagellar hook-associated protein FlgL [Geobacillus sp. Y412MC61]
gi|319768251|ref|YP_004133752.1| flagellar hook-associated protein 3 [Geobacillus sp. Y412MC52]
gi|261377038|gb|ACX79781.1| flagellar hook-associated protein 3 [Geobacillus sp. Y412MC61]
gi|317113117|gb|ADU95609.1| flagellar hook-associated protein 3 [Geobacillus sp. Y412MC52]
Length = 297
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/210 (12%), Positives = 63/210 (30%), Gaps = 3/210 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + A + +++ NL+ Q ++S+G +++ +D+ +S+ +
Sbjct: 3 ITQSMLANNTLKQITRSYANLDKYQTQLSTGKKITRPSDDPVVAMKGIAYRSNLAEVEQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ V+ + + + KA + I+ + +SI E+ QL L
Sbjct: 63 KRNFSEAYNWVENSDSALDKATQALQRIRELVVQASNDTYEETQRQSIAKEVRQLTEHLV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + + ++ S + Y+ +
Sbjct: 123 TIANTKVGDKYIFNGAKTTEPPVTVNPDGTISVSTNSQQLNIELAKGIYIPVNIPPSTAF 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
G+ + L P +
Sbjct: 183 GAGSGLFSDLQNLAASLENPSTTGNDLTGY 212
Score = 48.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 32/83 (38%)
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
+ + + +D+ + ++G+ +RI L ED I + EK + D
Sbjct: 201 NPSTTGNDLTGYLDKLDSHLTNLLGVRAELGARMNRIELMEDRIDSQQVIAEKMLSDNED 260
Query: 413 ADMASESTRLSALQTQQQLAVQA 435
D+ T L ++ + A+
Sbjct: 261 VDLEKVITDLKTQESVHRAALAV 283
>gi|78064820|ref|YP_367589.1| flagellin [Burkholderia sp. 383]
gi|77965565|gb|ABB06945.1| Flagellin [Burkholderia sp. 383]
Length = 272
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 37/230 (16%), Positives = 82/230 (35%), Gaps = 3/230 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +I TN +++ L L +R+SSG R++ AAD+AA +I+ + AL
Sbjct: 1 MLNINTNILSLTTQTNLSGSQSALSQAINRLSSGKRINTAADDAAGLAISTSQTAAINAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A + +D + I+ + + ++Q+E+T
Sbjct: 61 TQGVANANNGISMIQTANGALQSTVDNLQRIRTLAQQAGDGSLDSSARANLQAEVTTRLG 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +A ++FN + L + A + + T +
Sbjct: 121 EIDRVASQTTFNSQTILGGTGSVTFQIGAAANQVVTVDFGTANWNSTGMSVNTLSVATQS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+ + T L + + + ++ + + T +T +
Sbjct: 181 GAQSAITAIDAALKQVNTFQATLGAAQNTFQAAISTTQTQATNMTAARSQ 230
Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/267 (11%), Positives = 69/267 (25%)
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
L + L + + AA Q
Sbjct: 5 NTNILSLTTQTNLSGSQSALSQAINRLSSGKRINTAADDAAGLAISTSQTAAINALTQGV 64
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A + + ++ + + ++A A + +S + +
Sbjct: 65 ANANNGISMIQTANGALQSTVDNLQRIRTLAQQAGDGSLDSSARANLQAEVTTRLGEIDR 124
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
S T T + + NT + + +
Sbjct: 125 VASQTTFNSQTILGGTGSVTFQIGAAANQVVTVDFGTANWNSTGMSVNTLSVATQSGAQS 184
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ ID +K +G+ + + + ++ DAD A+E+ LS
Sbjct: 185 AITAIDAALKQVNTFQATLGAAQNTFQAAISTTQTQATNMTAARSQITDADFATETANLS 244
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLF 450
Q QQ + L+ N+ ++L L
Sbjct: 245 KAQVLQQAGISVLAQANSLPQQVLKLL 271
>gi|229827761|ref|ZP_04453830.1| hypothetical protein GCWU000182_03153 [Abiotrophia defectiva ATCC
49176]
gi|229787960|gb|EEP24074.1| hypothetical protein GCWU000182_03153 [Abiotrophia defectiva ATCC
49176]
Length = 507
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 51/507 (10%), Positives = 126/507 (24%), Gaps = 65/507 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I+TN + + NL ++++ +G ++ +D+ A ++++ ++
Sbjct: 7 IMTN----NTLANINTNKLNLMKIEEQYETGKKIQRPSDDPVVAIRALKLRNNLTEINQY 62
Query: 64 -SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
+ S + + ++ +++ D+ +T+ G TD SI + Q + Q+
Sbjct: 63 FKKNVPDAKSWIQVTESALTQVTDICTTLHGLADQGANGTLTSTDRTSIMKTMQQYRQQI 122
Query: 120 RD----------IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
+ G + D S +I + + I+ + ++ Y
Sbjct: 123 YQEGNANYAGRYVFTGYKTDTSLTYLNDDKSKQYTITEEFDKTAIKTNLRTYGGYSVKDY 182
Query: 170 LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
+ E L K+ + D +
Sbjct: 183 EPGGANEFSEHPENQEISYLRLAYKKLDAAADGYPKLTYKDEDGNEGDIDITSTDENGET 242
Query: 230 AWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
+ +A G I + + +
Sbjct: 243 ITSNSPDAYKKPDSGAKYIADTGELILSDEAAEQLKNSKGFNVEYNKTEFSNGDVRPEHY 302
Query: 290 RATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRH 349
+ D + + D E +++ L
Sbjct: 303 FNCKATPLDEDGNPVDDESKIINYKKEDQDIEYEVSFNQRLQINTQAKDALSHDLGRELD 362
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKC----------------------------------- 374
+ + +E + +D I
Sbjct: 363 GILASIEDVNLVENKLKEVDKLISNTSDATDLASLKRLKEQINTELTLKQKVMQERFSQS 422
Query: 375 ----------ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+GS +R+ L E + D + + +AD+A +A
Sbjct: 423 LDSIKNYQNVVNKNIADLGSRDARLELTEQRLSGQTDDFKDLMSNNENADLAETIINFNA 482
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++Q + +L R
Sbjct: 483 QKVIYNASLQ--AGAKVVQNTLLDFLR 507
>gi|78047579|ref|YP_363754.1| flagellar hook-associated protein FlgL [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325927968|ref|ZP_08189189.1| flagellar hook-associated protein 3 [Xanthomonas perforans 91-118]
gi|78036009|emb|CAJ23700.1| flagellin and related hook-associated proteins [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|325541653|gb|EGD13174.1| flagellar hook-associated protein 3 [Xanthomonas perforans 91-118]
Length = 401
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 52/443 (11%), Positives = 114/443 (25%), Gaps = 55/443 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ + + L ++ ++SSG R+ A D+ A + A++
Sbjct: 5 ISTSMMYSQSVASMGAKQSRLNQLESQLSSGQRLVTAKDDPVAAGTAVGLDRALAAITRF 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ +++ + + +S+A D M+ + D K+I SE+T L+ +
Sbjct: 65 GENANNVQNRLGLQENALSQAGDKMARVTELAVQASNSSLSPDDRKAIASELTALRESMV 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G S I + ++ D K D ++ +
Sbjct: 125 SLANSTDGTGRYLFGGTADGSAPFIKSNGSVTYNGDQTQKQVEVAPDTFVSDALPGSEIF 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G +D + L T + + +
Sbjct: 185 MRIRTGDGTVDAHANAANTGTGLLLDFSRDASTGSWNGGSYSVQFTAADTYEVRDSTNTV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
G + AA
Sbjct: 245 VGTGTYKEGEDINAAGV------------------------------------------- 261
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
++ + +S + + G + LN
Sbjct: 262 ---------RMRISGAPAVGDSFQIGASGTKDVFSTIGDLVGALNSDTLTAPQKTAMINT 312
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ + I A G+ S I ++ ++ + + D D AS
Sbjct: 313 LQSSMRDITQASSKMIDARASGGAQLSAIDNANALLESNEVTLKTSLSSIRDLDYASAIG 372
Query: 421 RLSALQTQQQLAVQALSIVNNST 443
+ + Q A + +S+
Sbjct: 373 QYQLEKASLQAAQTIFQQMQSSS 395
>gi|3551533|dbj|BAA33017.1| flagellin [Borrelia garinii]
Length = 316
Score = 94.8 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 3/129 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
NL Q+++SSG R++ A+D+AA ++ + + LS S + + + +
Sbjct: 1 ANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEGNL 60
Query: 82 SKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
++ V+ +K D SIQ EI QL ++ A + + + L
Sbjct: 61 NEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRTADQAQYYQMHMLSNKF 120
Query: 139 GSSTASIAK 147
S A+
Sbjct: 121 ASQNVRTAE 129
Score = 84.4 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 21/200 (10%), Positives = 55/200 (27%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ T+ G + + A+ S N + +
Sbjct: 117 SNKFASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVAN 176
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ T + + + + ++ I+
Sbjct: 177 LFSGEGAQAAQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENA 236
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I+ + +G+ +R+ ++ + + ++ ++ DA M E + Q
Sbjct: 237 IRMISDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQS 296
Query: 432 AVQALSIVNNSTARILSLFR 451
A+ ++ N +LSL R
Sbjct: 297 AMAMIAQANQVPQYVLSLLR 316
>gi|218512918|ref|ZP_03509758.1| flagellin C protein [Rhizobium etli 8C-3]
Length = 145
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 51/96 (53%), Positives = 73/96 (76%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ ++ I++ + T+A ++GSIS+RI LQEDF+ + D+++ GVGRLVDADM
Sbjct: 50 TTGQIQSALTTIESALSAMTSAGAQLGSISTRIDLQEDFVGALSDSIDSGVGRLVDADME 109
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
ES++LSALQTQQQLA+Q+LSI N+S+ ILSLFRG
Sbjct: 110 EESSKLSALQTQQQLAIQSLSIANSSSQNILSLFRG 145
>gi|68533184|dbj|BAE06141.1| Flagellin [Campylobacter lari]
Length = 567
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 39/121 (32%)
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
++NI ++ +T I IGS+ ++I
Sbjct: 447 GGGNSQFANFKASMNIAAKDQEAGVTTLKGAMAVMDIAETAITNLDKIRADIGSVQNQIT 506
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ I + + ++ + D D A+ES + Q A+S N ++ L
Sbjct: 507 ATLNNISVTQVNIKSAESNIRDVDFAAESANFAKHNILAQSGSYAMSQANAVQQNVMRLL 566
Query: 451 R 451
+
Sbjct: 567 Q 567
Score = 84.4 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 73/198 (36%), Gaps = 3/198 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVASLNAQNNANLNSRALDSSLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + +Q++I +L QL
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKVKATQAAQDGQTTKTRNMLQADINRLMEQLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + S + + DS
Sbjct: 125 NIANQTSFNGKQLLSGGFVNQEFQVGAQSNQSIKASIGSTQSSKIGVTRFETGSQAKDSG 184
Query: 181 TDGTERYGLLDRNHKIKV 198
+
Sbjct: 185 IAQLTIKNYNGIDDFKFQ 202
>gi|255021364|ref|ZP_05293412.1| Flagellin protein flaB [Acidithiobacillus caldus ATCC 51756]
gi|254969227|gb|EET26741.1| Flagellin protein flaB [Acidithiobacillus caldus ATCC 51756]
Length = 524
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 71/196 (36%), Gaps = 3/196 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN SA++ L +L ++S+G ++ DN A ++IAQ ++ L+
Sbjct: 7 INTNVSALNTLNALNGTQGSLNTYLQQLSTGKSINGPQDNPAGYAIAQRFQTQINGLNQA 66
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
G S V A + ++ I+ D +++Q ++QL +Q++
Sbjct: 67 ISNGNQGVSLVQTATGAIQNQTSLLQQIRTTAVQAANASNTTQDRQALQGVVSQLLAQVQ 126
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + FNG+N L + + + +Y + SS
Sbjct: 127 TIATQTQFNGQNILDGTFAGAAFQVGANSNQIINVSVGNTQSNAMGNYTTTTSGTIYGSS 186
Query: 181 TDGTERYGLLDRNHKI 196
+ E G
Sbjct: 187 SGAYEMNGYAAGGAFT 202
Score = 74.4 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/333 (12%), Positives = 87/333 (26%)
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ A G +F + G+ ++ S + + +
Sbjct: 191 EMNGYAAGGAFTVSSGAVGAGGAGNFVKGTTLGVSGSVGSAAVTVTSADESAYSLAQSVN 250
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
S + + S T + T + L +
Sbjct: 251 QVSAQTGVSASAYTSTAFTVTTTGSISFTLSNGSSGSPTNAVNISATVTDGQSGLSSLVT 310
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ I + S ++ + AS+ G S +
Sbjct: 311 AINNQAAITGVSASTQTVNGTQELVLTQSQGQNIVIQASSGAATSGLSSGSTAVLQAVNG 370
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
T+ + + VG + + S S +
Sbjct: 371 TTGASIGGTLSSGVGGMLIQGVVQFQSSSSYAIGNASGIGFSSQAASLSGSAIANINVST 430
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
++ +S +D I G +G+I +RI + ++ + DA++A
Sbjct: 431 AAGAQQAISILDQAINYLNQQNGALGAIQNRIQASVSNDQTTATNLQSAQSVVQDANIAQ 490
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+++L+ Q QQ + L+ N L L
Sbjct: 491 ATSQLTKYQILQQAGISTLAQENALQQSYLKLL 523
>gi|188579919|ref|YP_001923364.1| flagellin [Methylobacterium populi BJ001]
gi|179343417|gb|ACB78829.1| flagellin domain protein [Methylobacterium populi BJ001]
Length = 592
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 79/378 (20%), Positives = 145/378 (38%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTS+LTN +AM+A L+ IN NL+ +RVS+G RVS+AADNAAYWSIA +++DN +L
Sbjct: 1 MTSLLTNSAAMTALTTLKSINSNLDATSNRVSTGQRVSNAADNAAYWSIATTVRTDNASL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV D++GLGSS VD A G++ + + ++ K+ ++ G D +Q+EI LQS+++
Sbjct: 61 SAVKDSLGLGSSAVDTAYNGLNSILSDLQNMRAKLQTALQPGVDRSKVQTEIAALQSKMK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A S+ +G+NWL + S+ + + IT +D + + L +
Sbjct: 121 ATADSSNSSGQNWLSVNSSSTNTAYKATQNVVAGFARGSTGAITFSQITIDVQNIRLYDT 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + D + + + +
Sbjct: 181 NATSITTAATNAQVVGATALTGTTAFRPNDTDETLRGTADFSGTNEVGFTLMTGGTSVTV 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + ++ + A S ++ + +T ++ ++
Sbjct: 241 RLNADSIKSAAKDLTKVTTDEFLSAFNNQIAASALSGEVTASLDTSGRLTFSTTDTGSTT 300
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ V TT D+ + T + + L
Sbjct: 301 SLNVSVAAPSVQTKTLIDTGFGTTPDTATVTGATYANMSVTTAKVFTINDGKTSKTITLD 360
Query: 361 MEEMVSFIDTQIKCATAA 378
+ A
Sbjct: 361 AAAYTALGGAATSTGNTA 378
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 68/378 (17%), Positives = 125/378 (33%), Gaps = 12/378 (3%)
Query: 79 AGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQL-----RDIARGSSFNGENW 133
+G ++ + T +T + + + + + IA +
Sbjct: 222 SGTNEVGFTLMTGGTSVTVRLNADSIKSAAKDLTKVTTDEFLSAFNNQIAASALSGEVTA 281
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
G T S + + + + T D++T Y +
Sbjct: 282 SLDTSGRLTFSTTDTGSTTSLNVSVAAPSVQTKTLIDTGFGTTPDTATVTGATYANMSVT 341
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
K DA+ + +T + A A+ P
Sbjct: 342 TAKVFTINDGKTSKTITLDAAAYTALGGAATSTGNTAVNGTDAVAMINAQLADAATGTPP 401
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+A + + + S +V +A + N + + ++ + +
Sbjct: 402 SASSVTASFADGKISLRNAVTGNAITLGGANVAAFGLTAGTTAASTVRTASGTAAGTTLA 461
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T ++ + + +++ +D I
Sbjct: 462 RGILDTAAGTYTTPGASSSNSYSIANLDISKLVGT-------TGDTDLSAIITAVDKAIA 514
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
T A K+G+ ++I Q+ F+ + A ++ +G LVDAD+ EST+L ALQTQQQLAV
Sbjct: 515 KVTDAGTKLGAGKTQIDGQKSFVDTLMKANDRTIGILVDADVEEESTKLKALQTQQQLAV 574
Query: 434 QALSIVNNSTARILSLFR 451
Q LSI N+ST ILSLFR
Sbjct: 575 QTLSIANSSTQSILSLFR 592
>gi|4378870|gb|AAD19738.1| flagellin [Zymomonas mobilis subsp. mobilis ZM4]
Length = 279
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 3/147 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T I TN SA+ A R + NL R+SSG ++ A+DNAA +I+ M + +
Sbjct: 3 TVINTNTSALRAQNASRLADNNLNTAMTRLSSGKSINSASDNAAGLAISSSMTAQINGMI 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQ 118
G S A + + +++ I + + +E+ QLQ Q
Sbjct: 63 QAISNANDGVSLAQTADGALGEVTNMVQRINQLAVQSANGTYQNSDREDMNTEVNQLQQQ 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASI 145
+ + +G++FNG TD I
Sbjct: 123 ITQVIKGTNFNGSTLFSTDTAGKKFQI 149
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 38/97 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +S I+ + +G+ SR+ + + + R+ D D
Sbjct: 183 VATSTDALKALSTINKALTGINTTRAGLGASESRLSSVVNNLTTNVTNLSDARSRIQDTD 242
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+SE+T L+ Q Q + L+ N S +LSL +
Sbjct: 243 YSSETTNLARSQILSQASTAMLAQANQSQQNVLSLLK 279
>gi|168705037|ref|ZP_02737314.1| flagellin FliC [Gemmata obscuriglobus UQM 2246]
Length = 613
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/336 (12%), Positives = 102/336 (30%), Gaps = 4/336 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S++ N ++++A L N L +R+S+GL+++ AD A I++ ++ L
Sbjct: 3 LSVVNNGASLNAQANLSKTNSALSKSLERLSTGLKINRGADGPAGLVISEQQRAQIAGLQ 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS----KSIQSEITQLQS 117
S V + +++ +++ I++ G + + Q+EI
Sbjct: 63 TAIANTNKAVSLVQTGEGALNEISSLLTKIRSLALDSANAGVNDATALAANQAEIANALG 122
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ IA + F + L ++ ++ + I V+
Sbjct: 123 TITQIATTTQFGSKKLLDGSASLGASTAVANIGVAVDPTAVAGDYNINITQSARRANVVG 182
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
++ L V + + + T + +
Sbjct: 183 SANFTAFTNGTLNGVVAAADVTAVTGGFTVDARDNVGAASAAGDDLQVTGNYTGVTNRTY 242
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
T + G + +T + + S + + + ++ TT ++
Sbjct: 243 TVEVLSGGDIGTNVVNLKVTDTSTNTFKNISIPTTYTSGDLITDPVLQGLQLKFTTGDTY 302
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
T++ YT T D ++
Sbjct: 303 TANDVYTFEAQGTGKLTLNGTDIALNGNNAGSLTDA 338
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/318 (11%), Positives = 74/318 (23%), Gaps = 8/318 (2%)
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
+ + + + + D ++ + + V V
Sbjct: 296 FTTGDTYTANDVYTFEAQGTGKLTLNGTDIALNGNNAGSLTDAIATINSYTGTTGVRASV 355
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ +S T T T T+ AA
Sbjct: 356 DPTNSARIAFSSATYGTGGDFTIRTDTFTETKLGLNSAGNFDTTTVSTTGAAANGVTGGR 415
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
T + ++T GN S G +
Sbjct: 416 EATGTISNDGGITTSTLQIDGNVASGFGLAITLKDDPASTTFTSAAPTTGTITVADNGLV 475
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDA-------YNEKLAMEEMVSFIDTQIKCA 375
+ + + T ++ + +D I
Sbjct: 476 FQIGANAGQTSNLRFSDVRATALAQNLVGNQFSSLAAVDVTTASGAQDTLKAVDQAIADI 535
Query: 376 TAAAGKIGSIS-SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+A GK+G+ + + + ++ + + D D A E + LQTQ Q
Sbjct: 536 SALRGKLGAFQTNTLESNANNLQSTLENTTAAESVVRDTDFAEEIATFTRLQTQLQAGAT 595
Query: 435 ALSIVNNSTARILSLFRG 452
L N +T + L RG
Sbjct: 596 VLGNANQTTQLVAQLLRG 613
>gi|332533168|ref|ZP_08409037.1| flagellar hook-associated protein FlgL [Pseudoalteromonas
haloplanktis ANT/505]
gi|332037450|gb|EGI73904.1| flagellar hook-associated protein FlgL [Pseudoalteromonas
haloplanktis ANT/505]
Length = 406
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 46/447 (10%), Positives = 103/447 (23%), Gaps = 46/447 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N + K+ + + Q++V++ R+ +D+ + S A + A
Sbjct: 3 LSNNLMYQNNINKILENQQGVSRAQEQVNTQKRILSTSDDPSAMSQASLYSDKIQANEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + SS++ + + + + +L+S +
Sbjct: 63 EKNITMLSSRLTNEETVLDNIKSSLERAHTLTIQAGNGAYSDIDREGIAEELKSIQSTVL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ E+ G + A S + + + Q + + +
Sbjct: 123 DLMNAKTEDGKYLFSGYQDNTPAYSYNSANQKYEYAGDQGLHKIKIAEGIDIKSSDNGFD 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
N +D VY N
Sbjct: 183 VFEKVQARLNVSSNDGVVSGGVLDSKVYVKEQGQFDSFHSAEYDPSGANNTYNVITTAGS 242
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A+ + + G ++ S + + V T
Sbjct: 243 PGTYTVEQGGNVLASGDLSDGLVKFNGLEISISPVATGQVDFTLGVPQKENVLNTM---- 298
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + D + + +
Sbjct: 299 -------------------------------------SNLITGLKDISLDQDAFEQVIAD 321
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ +D + +G + + + LV+ DMA T L+
Sbjct: 322 GLLQLDNGRNKVSLTQAGLGGRINAADKISQSNAELDINNKAARADLVELDMAEAITELT 381
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLF 450
+T Q S LSLF
Sbjct: 382 KQETALQA-----SQATFGRLANLSLF 403
>gi|42527854|ref|NP_972952.1| flagellar hook-associated protein FlgL [Treponema denticola ATCC
35405]
gi|41818682|gb|AAS12871.1| flagellar hook-associated protein 3 [Treponema denticola ATCC
35405]
Length = 415
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/436 (10%), Positives = 112/436 (25%), Gaps = 35/436 (8%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ +R+ L + +++ S R++ D+ + KS L
Sbjct: 2 MKRISTNIQHTDSNFSMRNQESRLHNLNNQIQSQRRINQLRDDPVSAGHSVRYKSYLARL 61
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ A+ M+ ++ V+ ++ G ++ + L+
Sbjct: 62 ERFEKNTKTLRDQYMSAETYMNNSLQVVQRLRELSVQGANGTYTPDDLKDMAAEADELLK 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++ +V +R +G T + + S+
Sbjct: 122 ELV--------------------QNGNAVNSDGVRVFSGTKSFTEPFETVMGDVDGAGSA 161
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
RY + +++ + + + +
Sbjct: 162 LITQVRYNGTVDSKEVETDELSFMRA---------------DQAGNRVFWAERQILISET 206
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A+ + + + + S + + + T
Sbjct: 207 DARNFVIKEDTSIEVDGVEIPLIAGDNVYAIMSKINDSGAAVKASLDPITSGLNLTTTDA 266
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
++ SG S+ I + +++
Sbjct: 267 RQLWLRDAEGSTVLSELGLIKAEQRPPYNLANSVRVSGGSLFDAAIAVRDAFLSGDQEAL 326
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+++ +D I T + GS SR + I V R D D+ T
Sbjct: 327 GGKVLGSLDEGIHNLTTRMAETGSKYSRAEVILARIDTQTLNVTAAESREADLDITKAIT 386
Query: 421 RLSALQTQQQLAVQAL 436
L + Q ++ L
Sbjct: 387 DLKMFEHTHQASLSVL 402
>gi|15644745|ref|NP_206915.1| flagellin B [Helicobacter pylori 26695]
gi|2506428|sp|Q07911|FLAB_HELPY RecName: Full=Flagellin B; AltName: Full=Flagellin N
gi|2313197|gb|AAD07183.1| flagellin B (flaB) [Helicobacter pylori 26695]
Length = 514
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 3/180 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A+++ N +L +++SSGLR++ AAD+++ +IA ++S + L
Sbjct: 5 INTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
V A M + I ++ TIK K + G +++QS+I +L +L
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + I + ++ +
Sbjct: 125 NIANTTSFNGQQMLSGSFSNKEFQIGAYSNATVKASIGSTSSDKIGHVRMETSSFSGAGM 184
>gi|48716120|dbj|BAD22848.1| flagellin [Campylobacter lari]
Length = 571
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 41/138 (29%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + + + + I ++ +T I
Sbjct: 434 VTAFSNAFGFSAKGDGASQFAAFAISAGNNSQIAAKDQQAGVTTLKGAMAVMDIAETAIT 493
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
IG++ ++I + I + + ++ + D D A+ES + Q
Sbjct: 494 NLDQIRADIGAVQNQITATLNNISVTQVNIKSAESNIRDVDFAAESANFAKFNILAQSGS 553
Query: 434 QALSIVNNSTARILSLFR 451
A+S N ++ L +
Sbjct: 554 YAMSQANAVQQNVMRLLQ 571
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 58/383 (15%), Positives = 115/383 (30%), Gaps = 3/383 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 4 INTNVASLNAQNNANLNSRALDSSLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ + A M + + ++ TIK K T + +Q++I +L +L
Sbjct: 64 INNGNGALGILQTADKAMDEQLKILDTIKVKATQAAQDGQSTKTRNMLQADINRLMEELD 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA ++FNG+ L + + I + + ++ S
Sbjct: 124 NIANTTAFNGKQLLSGGFTNQSFQIGAQSNQTIQASIGATQSSKIGVTRFETGSMSHTSG 183
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + + I+ + ++ A
Sbjct: 184 VAQLTIKNYNGIDDFKFQPVVISSSVGTGMGALAEEINRVADVTGVRANFLVQTTGAGSI 243
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+A + G S S + +
Sbjct: 244 KADKTSQDFTINGVKIGEVEYKDGDENGALISAINSVKDTTGVEASKDANGRLVLNSRDG 303
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G + VG+ D ++ S + I A ++
Sbjct: 304 RGIEITGNMGVGSGVLKDDYKNFGRLSLVKNDGKDILISGSGLSFIGMGAGDMISQASIS 363
Query: 361 MEEMVSFIDTQIKCATAAAGKIG 383
+ E IDT I A G
Sbjct: 364 LRESKGNIDTHIADAMGFNAYKG 386
>gi|254255040|ref|ZP_04948357.1| Flagellin [Burkholderia dolosa AUO158]
gi|124899685|gb|EAY71528.1| Flagellin [Burkholderia dolosa AUO158]
Length = 290
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN +A + + ++ I+ +L R+ +G ++ A DNAA +A +++ ++
Sbjct: 5 SVHTNSAAQTIRRNMQSISSDLNTSMTRLGTGKAINSAKDNAAGLQMAVRLEAQKRGMAV 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
+S + A +A +++ +K+ T + D +++Q+E +L ++L
Sbjct: 65 AMQNTQNATSMLQTADGAFGEATNILYRMKDLATQAADGAATEKDREAMQAEYNELGAEL 124
Query: 120 RDIARGSSFNGENWLRTDLG 139
+I +SF GE L + G
Sbjct: 125 ANIMTNTSFGGEKLLAANGG 144
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 39/92 (42%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
E + I+ + A G+ +R+ + + M GR+ D DMA+ES
Sbjct: 199 GANEQIGLINAALDDLGVARSSFGATQNRLSHVANNLNNMMANTTDAHGRITDTDMAAES 258
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++A Q Q + L ++ + +LSL +
Sbjct: 259 ANMTAKQVLMQTSTAMLKQTSSMSQMVLSLVQ 290
>gi|99082814|ref|YP_614968.1| flagellin-like [Ruegeria sp. TM1040]
gi|99039094|gb|ABF65706.1| Flagellar filament 33 kDa core protein (Class B) [Ruegeria sp.
TM1040]
Length = 282
Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 86/181 (47%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ +N NL Q +S+G + A DN+A W+I++ M+SD
Sbjct: 1 MSSILTNNGAMVALQTLKSVNNNLNDTQKAISTGKEIGVAKDNSAVWAISKTMESDIAGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
A+ + + +G + V +A AG + ++ ++ IK + + D IQ +I+ Q+
Sbjct: 61 EAIEEGLSIGEATVAVASAGAEQIVEKLTEIKELVVSAQSENVDHAKIQDDISSKVDQVA 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FNG N L D+ + ++ + G V I L+ S
Sbjct: 121 AIISAAQFNGANLLAFDVDGNGSTGVGVLASLDREGAGGTVTAVEITVDSVNFESSLNLS 180
Query: 181 T 181
Sbjct: 181 A 181
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 55/97 (56%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + I+ ++ A A +G+ S+R+ Q +F+ + D++ GV + D D
Sbjct: 186 ITDTTTAATALGEIEVLLQVAITGAAALGADSARLDDQSEFVSNLVDSMTMGVSTMTDTD 245
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
M S RLSALQTQQ+LAVQ+L+I N + +L LFR
Sbjct: 246 MEEASARLSALQTQQELAVQSLTIANEAPGTLLQLFR 282
>gi|114570511|ref|YP_757191.1| flagellin domain-containing protein [Maricaulis maris MCS10]
gi|114340973|gb|ABI66253.1| flagellin domain protein [Maricaulis maris MCS10]
Length = 274
Score = 94.4 bits (232), Expect = 4e-17, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 3/162 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +I TN AM A Q L N ++E VQ R+++GL V+ A DN ++IAQ M+SD
Sbjct: 1 MATINTNAGAMVALQNLNQTNRDMEQVQSRINTGLAVASAKDNGGVYAIAQKMRSDVNGY 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQS 117
+AV +++ L +S D+A A D++ +K K A + ++ + L+
Sbjct: 61 AAVGNSLDLAASTTDVALAAGEAIGDILIEMKEKALAASDSSLDTASRTALNEDFKALRD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
Q+ I + FNG N + + S +A + D
Sbjct: 121 QISTIVDNAEFNGTNLINNSVTSISALANADGSNTITISDQN 162
Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%)
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
A A K ++AAS + + + N+
Sbjct: 71 ASTTDVALAAGEAIGDILIEMKEKALAASDSSLDTASRTALNEDFKALRDQISTIVDNAE 130
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
+ V + S ++ I + A ++ +V+
Sbjct: 131 FNGTNLINNSVTSISALANADGSNTITISDQNFSLGGGNVTVAAAASFASAGDASTLVTT 190
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
I+T + A+ K+G+ SS + + + F+ + DA+EKG+G LVDAD+A ES RL +LQ
Sbjct: 191 IETSLDNLNASLAKLGTASSSLEIHKGFVGKLSDALEKGIGNLVDADLAKESARLQSLQV 250
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
+QQL VQALSI N++ + IL FR
Sbjct: 251 KQQLGVQALSIANSAPSTILGYFR 274
>gi|163742535|ref|ZP_02149921.1| flagellin C protein [Phaeobacter gallaeciensis 2.10]
gi|161384120|gb|EDQ08503.1| flagellin C protein [Phaeobacter gallaeciensis 2.10]
Length = 270
Score = 94.4 bits (232), Expect = 4e-17, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 92/207 (44%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ +N +L+ Q ++S+G R+ A DNAA W+I++ M SD
Sbjct: 1 MSSILTNNGAMVALQTLQSVNNSLDDTQSQISTGKRIGSAKDNAAVWAISKTMDSDISGY 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+V +++G+G + V +A +G + ++ ++ +K + D IQ I + +Q+
Sbjct: 61 KSVQESLGVGEATVAVALSGAEQIVETLTEMKQLAISANSENVDHAKIQDSIAKKAAQIE 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FNG N L ++ +S + + + I + + ++
Sbjct: 121 SIIDSAEFNGANLLDDNVTTSLTVLGGLDPSADTITVTAIDSESNISTAGITDITDVATA 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDID 207
+ + N
Sbjct: 181 STALTEIETMLGNAIDAAAQLGADSNR 207
Score = 79.0 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%)
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ + ++ + + A + ++ I+T + A AA ++G+ S+R+
Sbjct: 151 SADTITVTAIDSESNISTAGITDITDVATASTALTEIETMLGNAIDAAAQLGADSNRLTD 210
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
Q F+ + D++ GV + D +M S RL ALQTQQQLAVQ+LSI N + ++ LFR
Sbjct: 211 QGMFVSKLSDSLTMGVSTMTDTNMEESSARLKALQTQQQLAVQSLSIANQAPQTLMQLFR 270
>gi|157056863|gb|ABV02448.1| flagellin B [Arcobacter cryaerophilus]
Length = 316
Score = 94.4 bits (232), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 80/173 (46%), Gaps = 3/173 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + N ++ +++S+GL+++ A+D+A+ +IA +++ +++
Sbjct: 3 INTNISSLTAQEAATNTNRSISSSLEKLSTGLKINKASDDASGLAIADKLRTQVTSINQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ + IA M++ ++ T+K+K+ +I ++ +L QL
Sbjct: 63 VSNGNSAVALLQIADKSMAEQSKILDTVKSKLIQANSDTTSDDGRTAIAKDVAKLLQQLN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE 173
+IA +++NG N L+ + A+ + + QI L
Sbjct: 123 NIAEQTNYNGTNLLQAGRSTGGATSLTASVSGNKAKGELSFQIGENQKDLIKT 175
Score = 81.7 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 31/85 (36%)
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
ID I G IGS +++ + ++ + D D A ES + L
Sbjct: 232 AIDKAITKLNGYRGDIGSTQNQVESAIRNLMTQATNIKNAESVIRDIDYAEESANFNKLN 291
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
Q A+S N + +L L +
Sbjct: 292 IISQAGSYAISQSNAVSQNVLRLLQ 316
>gi|172059234|ref|YP_001806886.1| flagellin [Burkholderia ambifaria MC40-6]
gi|171991751|gb|ACB62670.1| flagellin domain protein [Burkholderia ambifaria MC40-6]
Length = 274
Score = 94.4 bits (232), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 71/185 (38%), Gaps = 3/185 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +I TN +++ L L +R+SSG RV+ AAD+AA +I+ + AL
Sbjct: 1 MLNINTNILSLTTQTNLSGSQSALSQAINRLSSGKRVNTAADDAAGLAISTTQTAAINAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A + +D + I+ + ++Q+E+T
Sbjct: 61 TQGVANANNGISMIQTAAGALQSTVDNLQRIRTLAVESGDGSLDSNARANLQAEVTTRLG 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +A ++FNG+ L + A + + T L TV
Sbjct: 121 EIDRVATQTTFNGQTILSNAGNVTFQVGASANQTVAVNFGATVWTSTGAGLSLSGLTVSD 180
Query: 178 DSSTD 182
+S
Sbjct: 181 QTSAQ 185
Score = 83.3 bits (203), Expect = 9e-14, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 42/97 (43%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+++ + + ++ IDT +K +G+ + + + ++ DAD
Sbjct: 178 VSDQTSAQSAITAIDTALKNVNTFQATLGAAQNTFQAAITTTQTQATNMSAARSQITDAD 237
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+E+ LS Q QQ + L+ N+ ++L L +
Sbjct: 238 FATETANLSKAQVLQQAGISVLAQANSLPQQVLKLLQ 274
>gi|312135424|ref|YP_004002762.1| flagellar hook-associated protein 3 [Caldicellulosiruptor
owensensis OL]
gi|311775475|gb|ADQ04962.1| flagellar hook-associated protein 3 [Caldicellulosiruptor
owensensis OL]
Length = 315
Score = 94.4 bits (232), Expect = 4e-17, Method: Composition-based stats.
Identities = 19/161 (11%), Positives = 58/161 (36%), Gaps = 3/161 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + L L+ +Q ++++G ++ +D+ + + +++D + +
Sbjct: 3 ITNNMMVNNFLINLNKNLSRLDDIQYKMATGKKIRYPSDDPVVTARSLRLRTDVSEIEQL 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ S VDI ++ ++ + + ++ G D I E+ Q++ +
Sbjct: 63 QKNVDDAISWVDITESALADITENLQRVRELTVRGANGTNTKEDMAQIAKEVAQIKQHII 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV 161
+ + + ++ + S + +G
Sbjct: 123 QVGNTNYAGRYIFSGFKTDTAPINPDGSFSDTGSFTSSGGY 163
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 34/82 (41%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + ++S ID I A G +G++ +R+ L ++ + + D DMA
Sbjct: 222 DVNTVNSLLSNIDRHIDNVVAQRGDVGALQNRLELIKNRLSDDNVNFTTLLSNNEDVDMA 281
Query: 417 SESTRLSALQTQQQLAVQALSI 438
+L + + A+Q +
Sbjct: 282 EIIMQLKTAENVYRAALQTGAQ 303
>gi|309789354|ref|ZP_07683944.1| flagellin domain protein [Shigella dysenteriae 1617]
gi|308922748|gb|EFP68265.1| flagellin domain protein [Shigella dysenteriae 1617]
Length = 112
Score = 94.4 bits (232), Expect = 4e-17, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 42/108 (38%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ + L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS 110
+ G S + +S+ + + I+ + S
Sbjct: 64 AARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSDSDLDS 111
>gi|154252994|ref|YP_001413818.1| hypothetical protein Plav_2552 [Parvibaculum lavamentivorans DS-1]
gi|154156944|gb|ABS64161.1| conserved hypothetical protein [Parvibaculum lavamentivorans DS-1]
Length = 393
Score = 94.4 bits (232), Expect = 4e-17, Method: Composition-based stats.
Identities = 62/450 (13%), Positives = 141/450 (31%), Gaps = 58/450 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M ++ + + S +++ L+ Q R+++GL+V A D+ + AQ + + L
Sbjct: 1 MADVVLSGAIRSNLLSMQNTAKMLDETQLRLATGLKVRSAVDSPTSFFTAQGLNNRASDL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+++ DA+G G V +A ++ L ++
Sbjct: 61 NSLLDAMGQG---VQTLEAADQGIKSILK-------------------------LVDSMK 92
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + + A+++ + + + D IT + + +S
Sbjct: 93 AVANQALETKVKAAVITGNQTGAALSAATALNGLGDLATGNTITITVGEVTETVTIGAAS 152
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ L+D + + L + + + T + + +
Sbjct: 153 GNIATVQDLIDWANDTFDGDEPLTAALTPEGQLTFEGANGRDVAVTAASGVTPVSLSGLL 212
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
++ AT V N + + + G++ T
Sbjct: 213 GSRTTATDGVNRDKFERDFNNLREQIEQLARDASYKGVNLLKGDTLSVFFNTE------- 265
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
++ + + + +
Sbjct: 266 -----------------------QTSKLDIEGVDLTPEGDLNIGAVDNESGNHGFALDAG 302
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ V +++ A G+ + +++DF K + + +E G L AD E
Sbjct: 303 IKAFVDTLNSATNVLRQQASTFGANLGVVQIRQDFTKSLVNTLETGASNLTVADTNEEGA 362
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
++ ALQT+QQL ALS+ N + +L LF
Sbjct: 363 KMLALQTRQQLGTTALSLANQAEQGVLRLF 392
>gi|316936128|ref|YP_004111110.1| flagellin domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315603842|gb|ADU46377.1| flagellin domain protein [Rhodopseudomonas palustris DX-1]
Length = 271
Score = 94.4 bits (232), Expect = 4e-17, Method: Composition-based stats.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 3/184 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +A +A + L + ++SSG R++ A+D+AA +I+ + SD L
Sbjct: 1 MPVISTNTAANTAVRFLNVNSAQESSSLAKLSSGSRINKASDDAAGLAISTRISSDITTL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ +S + A G S D+++ +K+ T IQSE +QL S
Sbjct: 61 QQAATNASQATSILQTADGGASNISDILARMKSLATQASSGNVTDDSRGYIQSEFSQLIS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ IA G+ ++G + L D +++ + S + + T L T
Sbjct: 121 QIDSIASGTRYSGTSLLNGDFTTTSIMVGTSTTDTISVSLSDLTSATLGVNALSVATQAG 180
Query: 178 DSST 181
++
Sbjct: 181 ATTA 184
Score = 66.3 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 53/137 (38%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T +TT + S + T N + + ++ +D I
Sbjct: 134 TSLLNGDFTTTSIMVGTSTTDTISVSLSDLTSATLGVNALSVATQAGATTALTALDAAID 193
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
++A IG++ SR + D I + +E + D D+ASE +L++ + + Q AV
Sbjct: 194 TVSSARASIGALESRFNFSSDSISTQSENLEAANSAIADVDIASEQAKLASAEVKVQAAV 253
Query: 434 QALSIVNNSTARILSLF 450
A S N +L L
Sbjct: 254 AAESAANQMPQYLLKLL 270
>gi|229189858|ref|ZP_04316868.1| Flagellin [Bacillus cereus ATCC 10876]
gi|228593532|gb|EEK51341.1| Flagellin [Bacillus cereus ATCC 10876]
Length = 264
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 26/199 (13%), Positives = 62/199 (31%)
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A + ++ + + AS+ + + + D +
Sbjct: 66 TGDSALQSMSNILLRMRDLATQASSGTNGTTDVTSVGKEYAQLKAEIDHIAEKTNFNGKA 125
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ ++ D + S+ T ++T D + +DT I
Sbjct: 126 FLNADAGGDADISVQLSDASGDTLVIQSLNTKDLTTANLGDDITTNELAAAELDKLDTAI 185
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A GS +R+ + + + ++ DADMA E + ++ + +
Sbjct: 186 QSIADARATFGSQLNRLDHNLNNVTSQATNMAAAASQIEDADMAKEMSEMTKFKILNEAG 245
Query: 433 VQALSIVNNSTARILSLFR 451
+ LS N + + L +
Sbjct: 246 ISMLSQANQTPQMVSKLLQ 264
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 3/132 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + +R + +R+SSG ++ AAD+AA +IA M++ G L +
Sbjct: 1 MRTQEYMRQNQDKMNTAMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLVVGARNTQDA 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + + + +++ +++ T TD S+ E QL++++ IA ++
Sbjct: 61 MSALRTGDSALQSMSNILLRMRDLATQASSGTNGTTDVTSVGKEYAQLKAEIDHIAEKTN 120
Query: 128 FNGENWLRTDLG 139
FNG+ +L D G
Sbjct: 121 FNGKAFLNADAG 132
>gi|84778148|dbj|BAE73110.1| flagellin homolog p6 [Sphingomonas sp. A1]
Length = 297
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN +A+++ + + L R+ +G R++ A D+AA IA + S +
Sbjct: 1 MLSLHTNAAALTSQNAVGSVQKQLSTSMTRLGTGYRINSAMDDAAGLQIATRLNSQTRGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQS 117
+ G S + A+ ++ D++ +K+ T D KS+QSE L
Sbjct: 61 AVAMRNTQNGISMMQTAEGAFNEVSDILLRMKDLATEAASDSSSSDDKKSMQSEYDALGE 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASI 145
+L +I + +SF G N
Sbjct: 121 ELANIVKNTSFGGANLFSDGTKVDGTGG 148
Score = 84.4 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/295 (9%), Positives = 72/295 (24%)
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
S++ G + + S
Sbjct: 3 SLHTNAAALTSQNAVGSVQKQLSTSMTRLGTGYRINSAMDDAAGLQIATRLNSQTRGMAV 62
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ A N D + + + ++ +
Sbjct: 63 AMRNTQNGISMMQTAEGAFNEVSDILLRMKDLATEAASDSSSSDDKKSMQSEYDALGEEL 122
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
A ++ + + + G ++ + + L
Sbjct: 123 ANIVKNTSFGGANLFSDGTKVDGTGGKLSAAMTFQIGAAKSETMSVDVNAALATLAGTKL 182
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+G S + + I + + +G+ S+R+ + +
Sbjct: 183 TGLSTHYSAAAVTTAGTEITTTTSANTKIDDISKALDDVGSLRASLGAASNRLDHVYNNL 242
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
M + R++D D ASE+ +++ Q Q + L ++ + +LSL +
Sbjct: 243 SNMSTNTTQARSRIMDVDYASETANMTSKQLLMQASTSMLKQSSSMSQLVLSLMQ 297
>gi|2935159|gb|AAC38201.1| large flagellin [Burkholderia cepacia]
Length = 540
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 53/356 (14%), Positives = 109/356 (30%), Gaps = 4/356 (1%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
L R+SSG R++ AAD+AA +IA M++ L+ G S + A +
Sbjct: 2 SQNALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGLNQGVSNANDGVSMIQTASS 61
Query: 80 GMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
G+S+ + I+ +D +++Q E+TQ +++ IA +++NG+N L
Sbjct: 62 GLSQITSSLQRIRQLAVQASSGSLSTSDQQALQQEVTQQIAEVNRIASQTNYNGKNVLDG 121
Query: 137 DLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG-LLDRNHK 195
G+ + + +V + + + V + L L + + + +
Sbjct: 122 SAGNISFQVGANVGQTISLNLSQSVSAAALGQGLVSSGSTLGTLNNLSLNANGQAVTSGA 181
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
VL D + + + + +
Sbjct: 182 AITSINVLSDGKGGFTYTDQNNQALSSTAVSNLFGNSTGIGGSLNIQAAHGSALLAANQL 241
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
+ ++ N+ V A T +ITS T+
Sbjct: 242 ANISAANATPPAGTGITLGTITGISIDANTGNDVAAGTAGAITSITVKTDGNGGYQFFDQ 301
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+S+ + S ++ T + A +T
Sbjct: 302 TGAALKSSFVGDTTTAGSLFTIKTSTGGDTVSFTNATPDAQTQAANLSATLTAETA 357
Score = 48.2 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 8/79 (10%), Positives = 23/79 (29%)
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
+ + N + + + ID + +G+ +R +
Sbjct: 462 FAGIDSNNAPGTVANIDISTTAGANQAMESIDNALATVNNIQATLGAAQNRFTAISSTQQ 521
Query: 398 LMRDAVEKGVGRLVDADMA 416
+ + ++ DA+ A
Sbjct: 522 SQATNLSQAQSQIQDANFA 540
>gi|325474916|gb|EGC78102.1| flagellar hook-associated protein 3 [Treponema denticola F0402]
Length = 415
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 47/436 (10%), Positives = 112/436 (25%), Gaps = 35/436 (8%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ +R+ L + +++ S R++ D+ + KS L
Sbjct: 2 MKRISTNIQHTDSNFSMRNQESRLHNLNNQIQSQRRINQLRDDPVSAGHSVRYKSYLARL 61
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ A+ M+ ++ V+ ++ G ++ + L+
Sbjct: 62 ERFEKNTKTLRDQYMSAETYMNNSLQVVQRLRELSVQGANGTYTPDDLKDMAAEADELLK 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++ +V +R +G T + + S+
Sbjct: 122 ELV--------------------QNGNAVNSDGVRVFSGTKSFTEPFETVMGDVDGAGSA 161
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
RY + +++ + + + +
Sbjct: 162 LITQVRYNGTVDSKEVETDELSFMRA---------------DQAGNRVFWAERQILISET 206
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A+ + + + + S + + + T
Sbjct: 207 DARNFVIKEDTSIEVDGVEIPLIAGDNVYAIMSKINDSGAAVKASLDPITSGLNLTTTDA 266
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
++ SG S+ I + +++
Sbjct: 267 RQLWLRDAEGSTVLSELGLIKAEQRPPYNLANSVRVSGGSLFDAAIAVRDAFLSGDQEAL 326
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+++ +D I T + GS SR + I V R D D+ T
Sbjct: 327 GGKVLGGLDEGIHNLTTRMAETGSKYSRAEVILARIDTQTLNVTAAESREADLDITKAIT 386
Query: 421 RLSALQTQQQLAVQAL 436
L + Q ++ L
Sbjct: 387 DLKMFEHTHQASLSVL 402
>gi|295707172|ref|YP_003600247.1| flagellar hook-associated protein FlgL [Bacillus megaterium DSM
319]
gi|294804831|gb|ADF41897.1| flagellar hook-associated protein FlgL [Bacillus megaterium DSM
319]
Length = 293
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 52/114 (45%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I A ++ +++ + LE +Q+++S+G +++ +D+ + +S+ ++
Sbjct: 3 ITQGMLAANSLKQISNSYNKLETLQNQLSTGKKINRPSDDPVVATKGMAYRSNLSEVNQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQS 117
+ S D +++G+ + ++ K + G+ +S Q+ +++
Sbjct: 63 KRNLTEAQSWFDSSESGLEQVNSILQRTKELVVQGLNGTNESDDRQAIAREIEQ 116
Score = 48.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 43/103 (41%)
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
+ + N+ +++++ + +DTQ+ A ++G+ S+R+ L E+
Sbjct: 180 NIFGQGAFDLMKNVQTAFEQNDVNSLKDLSTQVDTQLSTLLAERSELGARSNRLELIENR 239
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+ K + DAD+ T L+ ++ + A+ +
Sbjct: 240 LDSQEITATKMLSNNEDADIEKVITDLTVQESVHRAALGVGAQ 282
>gi|322640424|gb|EFY37079.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 531954]
Length = 105
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 41/102 (40%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD 104
S G S + +++ + + ++
Sbjct: 64 ASRNANDGISIAQTTEGALNEINNNLQRVRELSVQATNGTNS 105
>gi|312115290|ref|YP_004012886.1| flagellin domain protein [Rhodomicrobium vannielii ATCC 17100]
gi|311220419|gb|ADP71787.1| flagellin domain protein [Rhodomicrobium vannielii ATCC 17100]
Length = 321
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 71/288 (24%), Positives = 122/288 (42%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN++A +A L++ +L+ Q+ +S+GLRVS AADNA+Y+SIA +KSD+ AL
Sbjct: 1 MTSILTNNAANTALLNLQNTVKSLDKTQNEISTGLRVSTAADNASYYSIATSLKSDSSAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ +SD++ + S + A + + + DV+S IK+ + +G D IQSEI Q+QL+
Sbjct: 61 TTISDSLDVADSTLATATSAIDEISDVLSKIKDSLVTATTQGADRTKIQSEIATYQAQLK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I+ +S NG+N+L D ++ + S + S R +G V TI + + +
Sbjct: 121 TISEAASLNGQNFLSVDSSATGYNDTASFVASLSRSSDGSVSYGTITFSKTDTALFDSNG 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G +
Sbjct: 181 DIGILDKVDSTTTGSFTNADGTTATATADGKSVFNLDISALTDEGADLAMINAYQKQVEA 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
K + L + + + + SV A + + + +
Sbjct: 241 AIKSVTAASSVLGSTQSRIESQKDFVDTLKTSVDAGVSSLVDADMNEA 288
Score = 83.6 bits (204), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/86 (52%), Positives = 58/86 (67%)
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
++ IK TAA+ +GS SRI Q+DF+ ++ +V+ GV LVDADM STRLSAL
Sbjct: 236 KQVEAAIKSVTAASSVLGSTQSRIESQKDFVDTLKTSVDAGVSSLVDADMNEASTRLSAL 295
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ+L VQALSI N S+ IL LF+
Sbjct: 296 QVQQELGVQALSIANESSQSILKLFQ 321
>gi|87306354|ref|ZP_01088501.1| flagellin [Blastopirellula marina DSM 3645]
gi|87290533|gb|EAQ82420.1| flagellin [Blastopirellula marina DSM 3645]
Length = 1281
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSR-IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+D I T+ G++G+ + + + + + DAD A+ES +L
Sbjct: 1193 AAKVVDEVISVVTSLRGRLGAFQKTTLDSNIYSLNDTLANLTEAESSIRDADFAAESAKL 1252
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ Q Q L I N + +LSL R
Sbjct: 1253 TRAQILVQAGTNTLGIANQNPQNVLSLLR 1281
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 47/397 (11%), Positives = 120/397 (30%), Gaps = 10/397 (2%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDI 76
+ N +L R+S+GLR++ D+ A ++ ++SD ++ + +
Sbjct: 1 MGRSNADLNTTLTRLSTGLRINSGKDDPAGLIASEALRSDITSVEKAITNSERANQLIAT 60
Query: 77 AKAGMSKAIDVMSTIKNKITAGVERGTDS----KSIQSEITQLQSQLRDIARGSSFNGEN 132
A + + + +++ I+ I+ G S + Q +I + IA+ +SF G+
Sbjct: 61 ADSALGQVSSLLNDIRGLISEAANTGALSDEQIAANQLQIDSSLEAIDRIAQVTSFQGKR 120
Query: 133 WLRTDLGSSTASI------AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
L +L T ++ + + + + T+ +
Sbjct: 121 LLDGNLDFITQNVNSSAIEGLRIDQANFGTQSSIGVKVNVVQQATRGTLNYGFGAVADDL 180
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+ + + + A +S A A K
Sbjct: 181 VLEIGGANGTEAFNFAKGSTIEEIASAVNLVSDATGVEALLETAATKGELTVSSFGTDND 240
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
+ A + S S + AS T + + + ++
Sbjct: 241 ILLTANEAGFDPGDVRIKYSKGTSSTTTASYTAPVGADPGKLEVTLGVSDYEAASLVVDT 300
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
T + + ++ + G + + + T N + +V+
Sbjct: 301 AGENNAFTLTANEAGADYNGTQVVFADGAELGDESASYDASTKTLTITKNAASNADAIVA 360
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
I+ + A+ G+ ++ + + + ++V
Sbjct: 361 AINNATERTAASFTTSGAANASLTVTSKILGDETNSV 397
>gi|68533178|dbj|BAE06136.1| flagellin [Campylobacter lari]
Length = 572
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 39/116 (33%)
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
V+ NI ++ +T I IGS+ ++I +
Sbjct: 457 QFANFAVSANIAAKDQEAGVTTLKGAMAVMDIAETAITNLDKIRADIGSVQNQITATLNN 516
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
I + + ++ + D D A+ES + Q A+S N ++ L +
Sbjct: 517 ISVTQVNIKSAESNIRDVDFAAESANFAKHNILAQSGSYAMSQANAVQQNVMRLLQ 572
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 74/198 (37%), Gaps = 3/198 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++++A + L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNVASLNAQNNANLNSRALDSSLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
+ A M + + ++ TIK K T + +Q++I +L QL
Sbjct: 65 ISNGNDALGILQTADKAMDEQLKILDTIKVKATQAAQDGQTTKTRNMLQADINRLMEQLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +SFNG+ L + + S + ++ DS
Sbjct: 125 NIANQTSFNGKQLLSGGFVNQEFQVGAQSNQSIKASIGSTQSSKIGVTRFETGSMSRDSG 184
Query: 181 TDGTERYGLLDRNHKIKV 198
+
Sbjct: 185 IAQLTIKNYNGIDDFKFQ 202
>gi|292492370|ref|YP_003527809.1| flagellar hook-associated protein 3 [Nitrosococcus halophilus Nc4]
gi|291580965|gb|ADE15422.1| flagellar hook-associated protein 3 [Nitrosococcus halophilus Nc4]
Length = 400
Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 43/433 (9%), Positives = 107/433 (24%), Gaps = 53/433 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ + + D + +Q ++++G R+ AD+ A + ++ LS
Sbjct: 3 ISTSLFQQRSIDGILDQQAQVSKIQQQLATGRRILTPADDPAAAARLLDVRETFEQLSQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
++++ + ++ D++ ++ + + E+ Q ++
Sbjct: 63 QRNADRATARLSQEETALAGVGDLLQRVRELAVQANNGAQNNENRVMMAKEVRQRLDEIL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A +GE G + I + ++ D + + + +
Sbjct: 123 GLANAQDASGEYLFAGFKGRTQPIIREGGNFTYQGDQGQRQIQISPSVQVADSDPGSEVF 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
E G + T +F +S + + +
Sbjct: 183 LAIREGNGTFVTEADPSNSGSGVIGPGSVSGTFVPGDYTLRFSQPQSSDSLTFEVLDSQN 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
Sbjct: 243 NVVTSGNFVSGGAITFGGAQ---------------------------------------- 262
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
V T D + T+ S + L
Sbjct: 263 ----------VRVTGTPGDGDRFTIRSSAHQDMFTTVQRFIDALERPVSDTASQARFNND 312
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
M ++ +D + + +G+ + I + + + + K L D D+A
Sbjct: 313 MNRTLTDLDQALGKVSEIRAGVGARLNAIDSERQMNEDVSLQMAKLQSSLNDLDLAEAIG 372
Query: 421 RLSALQTQQQLAV 433
L+ T + A
Sbjct: 373 HLNQQLTALEAAQ 385
>gi|99078112|ref|YP_611370.1| flagellin-like [Ruegeria sp. TM1040]
gi|99035250|gb|ABF62108.1| Flagellar filament 33 kDa core protein (Class B) [Ruegeria sp.
TM1040]
Length = 281
Score = 94.0 bits (231), Expect = 5e-17, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 77/146 (52%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ +N NL Q+ +S+G + A DNAA W+I++ M+SD +
Sbjct: 1 MSSILTNNGAMVALQTLKVVNTNLTDTQNAISTGKEIGVAKDNAAVWAISKTMESDIASF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
A+ + + +G + V +A AG + ++ + IK I + IQ++I Q+
Sbjct: 61 EAIEEGLSMGEATVAVASAGAEQIVEKLVEIKELIVSAQAENVSHDKIQTDIESKIDQIE 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I + FNG N L + + +
Sbjct: 121 SIIGAAQFNGANLLANTIDGTATQMG 146
Score = 69.8 bits (168), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 53/86 (61%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ I+ ++ A + A ++G+ ++RI Q F+ + D++ GV + D DM S RLSA
Sbjct: 195 LGEIEDFLQVAISGAAELGAAAARIDDQASFVSKLVDSMTMGVSTMTDTDMEEASARLSA 254
Query: 425 LQTQQQLAVQALSIVNNSTARILSLF 450
LQTQQ+LAVQ+L I N + +L LF
Sbjct: 255 LQTQQELAVQSLGIANQAPQALLQLF 280
>gi|163738069|ref|ZP_02145485.1| flagellin-like protein [Phaeobacter gallaeciensis BS107]
gi|161388685|gb|EDQ13038.1| flagellin-like protein [Phaeobacter gallaeciensis BS107]
Length = 270
Score = 94.0 bits (231), Expect = 5e-17, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 91/207 (43%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ +N +L+ Q ++S+G R+ A DNAA W+I++ M SD
Sbjct: 1 MSSILTNNGAMVALQTLQSVNNSLDDTQSQISTGKRIGSAKDNAAVWAISKTMDSDISGY 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+V +++G+G + V +A +G + ++ ++ +K + D IQ I + +Q+
Sbjct: 61 KSVQESLGVGEATVAVALSGAEQIVETLTEMKQLAISANSENVDHAKIQDSIAKKAAQIE 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FNG N L ++ +S + + + I + ++
Sbjct: 121 SIIDSAEFNGANLLDDNVTTSLTVLGGLDPSADTITVTAIDSESNISTAGITAITDVATA 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDID 207
+ + N
Sbjct: 181 STALTEIETMLGNAIDAAAQLGADSNR 207
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 64/120 (53%)
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ + ++ + + A A + ++ I+T + A AA ++G+ S+R+
Sbjct: 151 SADTITVTAIDSESNISTAGITAITDVATASTALTEIETMLGNAIDAAAQLGADSNRLSD 210
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
Q F+ + D++ GV + D +M S RL ALQTQQQLAVQ+LSI N + ++ LFR
Sbjct: 211 QGMFVSKLSDSLTMGVSTMTDTNMEESSARLKALQTQQQLAVQSLSIANQAPQTLMQLFR 270
>gi|330815136|ref|YP_004358841.1| Flagellin [Burkholderia gladioli BSR3]
gi|327367529|gb|AEA58885.1| Flagellin [Burkholderia gladioli BSR3]
Length = 384
Score = 94.0 bits (231), Expect = 5e-17, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 87/276 (31%), Gaps = 3/276 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++ A Q L L R+SSG +++ AAD+AA +IA M++ L
Sbjct: 1 MLGINTNINSLVAQQNLNGSQSALSQAITRLSSGSKINSAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQS 117
+ S + A + +S + I T + Q E+ +
Sbjct: 61 NQGVQNTNSAVSLIQTASSQLSALTTSLQRISTLATEAANGTLSQSDQVAAQQEVADQIA 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA ++FNG+N L G T + +V + D + + I L +
Sbjct: 121 EVNRIASQTNFNGKNLLDGSAGIVTFQVGANVGQTVTLDLSQSLSAAKIGGGLVQSGQTV 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + V D + + + A
Sbjct: 181 GTIQGLSLDANGAATTAAQPAITSVNVLSDGKGGFTFTDQNGQALSTTAVGAIFTTGTAA 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
A T+ + ++ T +
Sbjct: 241 GTGTAVTNLTLATGATSGMTTAQASAATQMISQINA 276
Score = 77.9 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 48/138 (34%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T+ + T +T+ + + +N + + + + + + +
Sbjct: 247 TNLTLATGATSGMTTAQASAATQMISQINAVNAPPTVSNLSISSATGANQTIFSVANALS 306
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ + + ++ AD A E+ LS Q QQ +
Sbjct: 307 TINNLQATLGATQNRLQAVAQTQQANSTNLSSAQSQIQSADFAQETANLSRAQVLQQAGI 366
Query: 434 QALSIVNNSTARILSLFR 451
L+ N+ ++L L +
Sbjct: 367 SVLAQANSLPQQVLKLLQ 384
>gi|167589227|ref|ZP_02381615.1| flagellin [Burkholderia ubonensis Bu]
Length = 272
Score = 94.0 bits (231), Expect = 5e-17, Method: Composition-based stats.
Identities = 40/230 (17%), Positives = 83/230 (36%), Gaps = 3/230 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +I TN ++S L L +R+SSG R++ AAD+AA +I+ + AL
Sbjct: 1 MLNINTNILSLSTQTNLSGTQNALSQAINRLSSGKRINTAADDAAGLAISTSQTAAINAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ G S + A + ID + I+ + ++Q+E+T
Sbjct: 61 TQGVANANNGISMIQTANGALQSTIDNLQRIRVLAQQSGDGSLDSGARANLQAEVTTRLG 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ +A ++FN + L S A + + T + +
Sbjct: 121 EIDRVASQTTFNSQTILGGAGSVSFQIGAAANQIVSVDFGTTNWNSTGMSVNTLSVSSQA 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+ + T L + + + + ++ + + T +T +
Sbjct: 181 SAQSAITSIDAALKQVNTFQAQLGAAQNTFQAAISTTQTQATNMSAARSQ 230
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 45/113 (39%)
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
+ + NT + + + + + ++ ID +K ++G+ + +
Sbjct: 159 FGTTNWNSTGMSVNTLSVSSQASAQSAITSIDAALKQVNTFQAQLGAAQNTFQAAISTTQ 218
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ ++ DAD A+E+ LS Q QQ + L+ N+ ++L L
Sbjct: 219 TQATNMSAARSQITDADFATETANLSKAQVLQQAGISVLAQANSMPQQVLKLL 271
>gi|311333764|gb|ADP89555.1| flagellin [Clostridium tetani]
Length = 234
Score = 94.0 bits (231), Expect = 5e-17, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 36 RVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI 95
R++ A D+AA +I++ M+ L+ S G S + A+ +++ ++ +K
Sbjct: 1 RINRAGDDAAGLAISEKMRGQIRGLNQASRNAQDGISLIQTAEGALNETHAILHRMKELT 60
Query: 96 TAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
D ++Q EI +LQS++ IA + FN + L L
Sbjct: 61 VQAANDTNVSVDKDNLQLEIKELQSEINRIASQTQFNTKTLLNGSLS 107
Score = 77.5 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 27/69 (39%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A+ + IDT + + K+G+ +R+ + + ++ R+ D DMA E
Sbjct: 150 AISAQLKTIDTALNEVSKERAKLGANQNRLEHTIANVNNASENLQAAESRVRDVDMAKEM 209
Query: 420 TRLSALQTQ 428
S
Sbjct: 210 MNFSKNNIL 218
>gi|115523186|ref|YP_780097.1| flagellin [Rhodopseudomonas palustris BisA53]
gi|115517133|gb|ABJ05117.1| flagellin domain protein [Rhodopseudomonas palustris BisA53]
Length = 309
Score = 94.0 bits (231), Expect = 5e-17, Method: Composition-based stats.
Identities = 74/159 (46%), Positives = 108/159 (67%), Gaps = 4/159 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+S++TN SAM+A Q LR++N +L Q+R+S+G RV+ A+DN+AYWSIA M+SDN AL
Sbjct: 1 MSSLMTNTSAMTALQTLRNVNSSLATTQNRISTGYRVATASDNSAYWSIATTMRSDNEAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDV----MSTIKNKITAGVERGTDSKSIQSEITQLQ 116
SAVSDA+GLG++ VD ++ + ++ +K K+ A E G D IQSEIT +Q
Sbjct: 61 SAVSDALGLGAATVDTMYTALTSVVGDSKGGLTALKAKLVAAREPGIDRTKIQSEITAIQ 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR 155
+ L++ A + FNGENWL D +++ + KSV+ SF R
Sbjct: 121 ADLKNTAGLAVFNGENWLAVDSSAASYNATKSVVSSFTR 159
Score = 73.6 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 44/98 (44%), Positives = 66/98 (67%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ ++ M+ +D + T A+ +G+ +RI +F+K +RDA+++G+G+LVDA
Sbjct: 212 NATDLAILDGMIGIVDQALGSVTQASADLGATKTRIDSNSNFVKSLRDAIDRGIGQLVDA 271
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
DM +ESTRL ALQTQQQL +QALSI N + ILSLF+
Sbjct: 272 DMNAESTRLQALQTQQQLGIQALSIANQGSQSILSLFK 309
>gi|1588478|prf||2208416A flagellin
Length = 195
Score = 93.7 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 4/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + +R+SSG ++ AAD+AA +IA M++ G L+
Sbjct: 3 INTNINSMRTQEYMRQNQDKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ S + A + +++ +++ T D S+ E L ++
Sbjct: 63 ARNTQDAMSALRTGDAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEID 122
Query: 121 D-IARGSSFNGENWLRTDLGSSTAS 144
D IA ++FNG +L T
Sbjct: 123 DHIADKTNFNGNAFLSGGGKDITIQ 147
>gi|222529659|ref|YP_002573541.1| flagellar hook-associated protein FlgL [Caldicellulosiruptor bescii
DSM 6725]
gi|222456506|gb|ACM60768.1| flagellar hook-associated protein 3 [Caldicellulosiruptor bescii
DSM 6725]
Length = 315
Score = 93.7 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 57/161 (35%), Gaps = 3/161 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + L L+ +Q ++++G ++ +DN + + +++D + +
Sbjct: 3 ITNNMMVNNFLINLNKNLSRLDDIQYKMATGKKIRYPSDNPVITARSLRLRTDVSEIEQL 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ S VD ++ ++ + + ++ G D I E+ Q++ +
Sbjct: 63 QKNVDDAISWVDTTESALADINESLQRVRELAVRGANGTNTKEDMAQIAKEVAQIKQHII 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV 161
+ + + ++ + S + D G
Sbjct: 123 QVGNTNYAGRYIFSGFKTDTAPINSDGSFSDTNSFDSTGGY 163
Score = 54.7 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 31/74 (41%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+S ID I A G +G++ +R+ L ++ + + D DMA +L
Sbjct: 230 LSDIDRHIDNVVAQRGDVGALQNRLELIKNRLSDDNVNFTTLLSNNEDVDMAEIIMQLKT 289
Query: 425 LQTQQQLAVQALSI 438
+ + A+Q +
Sbjct: 290 AENVYRAALQTGAQ 303
>gi|157147088|ref|YP_001454406.1| hypothetical protein CKO_02865 [Citrobacter koseri ATCC BAA-895]
gi|157084293|gb|ABV13971.1| hypothetical protein CKO_02865 [Citrobacter koseri ATCC BAA-895]
Length = 286
Score = 93.7 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/270 (14%), Positives = 86/270 (31%), Gaps = 3/270 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M+++ L N L +R+ +G R++ AAD+AA IA ++ ++ I
Sbjct: 1 MASTNALNKSNNLLSTAMERLGTGKRINSAADDAAGLQIATRLQGQTNGMAVAQRNISDA 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSS 127
++ + ++ + ++M +K+ T D +I +E+ L S+L++I +S
Sbjct: 61 TALLQTSEGAFDEVSNIMYRMKDLATQAANDTNTTKDRDAINAELNDLNSELQNIMNNTS 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
+ G+ A + + + T
Sbjct: 121 YAGDKLFGASGKFGEAMNFQIGSSTDETMQVDLSKELKGSGTDSLIDASGGFGTISDTSS 180
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ + KD+ ++ + + K+ + A +
Sbjct: 181 SYYSASGINITDAAGAKDLMNNLETTLNDVGAVRSKMGASINRLGHTAANLANMKDNTDL 240
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASA 277
+ A A +S T + S
Sbjct: 241 ALSNIQDADFASEASSMTRNQMLAQTSMSM 270
Score = 67.5 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 64/218 (29%)
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
AT + A A ++ + + I
Sbjct: 56 NISDATALLQTSEGAFDEVSNIMYRMKDLATQAANDTNTTKDRDAINAELNDLNSELQNI 115
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
S + + + + + E + + G
Sbjct: 116 MNNTSYAGDKLFGASGKFGEAMNFQIGSSTDETMQVDLSKELKGSGTDSLIDASGGFGTI 175
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T + A+ + +++++ ++T + A K+G+ +R+ + M+
Sbjct: 176 SDTSSSYYSASGINITDAAGAKDLMNNLETTLNDVGAVRSKMGASINRLGHTAANLANMK 235
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
D + + + DAD ASE++ ++ Q Q ++ L
Sbjct: 236 DNTDLALSNIQDADFASEASSMTRNQMLAQTSMSMLKQ 273
>gi|99080879|ref|YP_613033.1| flagellin-like [Ruegeria sp. TM1040]
gi|99037159|gb|ABF63771.1| Flagellar filament 33 kDa core protein (Class B) [Ruegeria sp.
TM1040]
Length = 282
Score = 93.7 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 57/195 (29%), Positives = 91/195 (46%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ +N +L VQ +S+G V A DN+A W+I++ M+SD
Sbjct: 1 MSSILTNNGAMVALQTLKSVNDDLGKVQTSISTGKEVGTAKDNSAVWAISKTMESDIAGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
A+ D + +G + V +A AG + ++ ++ +K I + D IQ++I +Q+
Sbjct: 61 EAIEDGLSVGEATVAVASAGAEQIVEKLTEMKELIVSAQSENVDHAKIQTDIDSKVAQVD 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FNG N L TD+ + A+ + G V I LD S
Sbjct: 121 AIISAAQFNGANLLATDVDGNGATSLGVLASLDREGAGGTVTAVEISVASVDFEADLDLS 180
Query: 181 TDGTERYGLLDRNHK 195
+ T
Sbjct: 181 SSLTSITDSTTAATA 195
Score = 84.4 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 55/97 (56%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + I+T I+ A A +G+ ++R+ Q +F+ + D++ GV + D D
Sbjct: 186 ITDSTTAATALGEIETMIQTAITGAASLGADAARLEDQSEFVGNLVDSMTLGVSTMTDTD 245
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
M S RLSALQTQQ LA Q+L+I N + + +L LFR
Sbjct: 246 MEEASARLSALQTQQDLATQSLTIANEAPSSLLQLFR 282
>gi|37654958|gb|AAQ96734.1| flagellin [Burkholderia multivorans]
Length = 626
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 43/348 (12%), Positives = 107/348 (30%), Gaps = 3/348 (0%)
Query: 23 NLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82
L R+SSG R++ AAD+AA +IA M++ L+ G S + A +G+S
Sbjct: 1 ALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGLNQGVSNANDGVSMIQTASSGLS 60
Query: 83 KAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
+ + I+ +D +++Q E+TQ +++ IA +++NG+N L G
Sbjct: 61 QITSSLQRIRQLAVQASSGSLSTSDQQALQQEVTQQIAEVNRIASQTNYNGKNVLDGSAG 120
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ T + +V + + + + ++ L L + + + +
Sbjct: 121 NITFQVGANVGQTISLNLSQSLSAASLGKGLVSAGSTLGTLNNLSLDANGNSVTSGAAIT 180
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+ + + + A + + L + +
Sbjct: 181 AINVLSDGNGGFTYTDQNNQALSAKAVKNLFGNSTGVGGALNITASGSGSALLSTSQLST 240
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + + + ++ + + N +
Sbjct: 241 ISQANATPPAGTNTVIGTITGLSIDASTGKDVAAGTQGAITSITVKTNGSGGFNFYDQTG 300
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
+ +T + S ++ + N ++
Sbjct: 301 AQLSTGLVGDNSGTNPGSLLTITKGTGGNGDSVSFTNSVSTQLANINA 348
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/298 (10%), Positives = 76/298 (25%)
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
D S T S++ + + +V + + ++
Sbjct: 329 NGDSVSFTNSVSTQLANINAATFSSQVTSVNGAVTMALPSATTTLGKITGLNVDTSGKDV 388
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ + + + T + + Q G T
Sbjct: 389 AAGTAGAITSLTVTEDTSGNIHFADQNGTDVTATMTAAGTGLFSVVQGNGTTTKASFAMQ 448
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
A T SGT S + + + + S + V+ +
Sbjct: 449 GKATAPTISGTITGLSLDASGNNVAPGTQGAITSITVKNTGGTLSYTDQNGADVSSLFTG 508
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + ++ + S+ N ++ + + + ID +
Sbjct: 509 SAGSVAFKSGVSPISYSAPQLAAFSSIDANNAPGTVSSIDISTTTGANQAMESIDNALAT 568
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+G+ +R + + + ++ DA+ A E+ LS Q QQ
Sbjct: 569 VNNIQASLGAAQNRFTAISTTQQAQSTNLSQAQSQIQDANFAQETANLSKAQVLQQAG 626
>gi|258592526|emb|CBE68835.1| putative flagellin [NC10 bacterium 'Dutch sediment']
Length = 279
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T I TN +A +A L++I L V Q R+ SG R++++AD+ A +SIA + S L+
Sbjct: 7 TRINTNIAAFNALNSLKNIGNQLGVSQLRLQSGKRINESADDPAGFSIASKLTSRARGLA 66
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQSQ 118
D++G + + IA+ D + I++ I ++ +I+ +I L ++
Sbjct: 67 TALDSVGTSMNLLSIAEGAAQSIHDNLMNIQDLIRQTTSSNLGTSERGAIEQQIDDLSAE 126
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAK 147
+ + ++FNG + +
Sbjct: 127 ITRLRDSTTFNGVSLIDGTFTGRRILTGA 155
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
A + ++++D + IGS+SSR+ D + + + R++D
Sbjct: 181 MAVDTVANASLSLTYVDAALTSVRLEIQNIGSVSSRLRSISDNLSVAVTNTQAAKSRVMD 240
Query: 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
AD+A+E LQ QQLA L+ N+ ++L+LFR
Sbjct: 241 ADVAAEQVNAVRLQILQQLATAQLTQANSGPQQVLALFR 279
>gi|157147090|ref|YP_001454409.1| hypothetical protein CKO_02867 [Citrobacter koseri ATCC BAA-895]
gi|157084295|gb|ABV13973.1| hypothetical protein CKO_02867 [Citrobacter koseri ATCC BAA-895]
Length = 281
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 68/196 (34%), Gaps = 3/196 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M+++ L N L +R+ +G R++ AAD+AA IA ++ ++ I
Sbjct: 1 MASTNALNKSNNLLSTAMERLGTGKRINSAADDAAGLQIATRLQGQTNGMAVAQRNISDA 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSS 127
++ + A+ + ++M +K+ T D +I +E+ L ++L++I +S
Sbjct: 61 TALLQTAEGAFDEVSNIMYRMKDLATQAANDTNTTKDRDAINAEMNDLNAELKNIMGNTS 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
+ G+ T + + + S D
Sbjct: 121 YAGDKLFGTGGKFADSLNFQIGSSSGETMTVSLGDELGGTASGLFSASGFSGIGDWNNTA 180
Query: 188 GLLDRNHKIKVEPQVL 203
++ +
Sbjct: 181 SGINIGSASDATAMMN 196
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/268 (13%), Positives = 77/268 (28%)
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
T L+ S + K G + S A
Sbjct: 1 MASTNALNKSNNLLSTAMERLGTGKRINSAADDAAGLQIATRLQGQTNGMAVAQRNISDA 60
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVR 290
A + + A A N T+ T + + + + N
Sbjct: 61 TALLQTAEGAFDEVSNIMYRMKDLATQAANDTNTTKDRDAINAEMNDLNAELKNIMGNTS 120
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
+ + +S ++G++ T S + + + A
Sbjct: 121 YAGDKLFGTGGKFADSLNFQIGSSSGETMTVSLGDELGGTASGLFSASGFSGIGDWNNTA 180
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ M++ ++T + A K+G+ +R+ + M+D + + +
Sbjct: 181 SGINIGSASDATAMMNSLETALNDVGAVRSKMGASINRLGHTAANLANMKDNTDLALSNI 240
Query: 411 VDADMASESTRLSALQTQQQLAVQALSI 438
DAD ASE++ ++ Q Q ++ L
Sbjct: 241 QDADFASEASSMTRNQMLAQTSMSMLKQ 268
>gi|119384359|ref|YP_915415.1| flagellin domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119374126|gb|ABL69719.1| flagellin domain protein [Paracoccus denitrificans PD1222]
Length = 284
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 45/137 (32%), Positives = 78/137 (56%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ IN NL Q+ +S+G +V++A DNAA W+I+++M+SD
Sbjct: 5 MSSILTNNGAMVALQTLKGINANLTKAQNEISTGKKVANAQDNAAVWAISKVMESDQSTF 64
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + L + V A+ G +++ ++N ++ D +S+ +I + Q+
Sbjct: 65 KTLQSNLNLAEAVVTTARTGAEDIHELLVEMRNLASSAGSDANDFESVNDQIVAKRDQII 124
Query: 121 DIARGSSFNGENWLRTD 137
I G+ NG N L+T+
Sbjct: 125 SIIDGTQMNGVNLLKTN 141
Score = 70.5 bits (170), Expect = 6e-10, Method: Composition-based stats.
Identities = 47/138 (34%), Positives = 65/138 (47%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T + V + + S+ A + V I+ I
Sbjct: 147 TSFSVLASLDRTAGTVATTAQTITVDSVDFEADIEAATITTITDSTTARTAVGEIEALID 206
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A A ++G+ + RI+ Q +F+ + D++ G+G LVDADM S RL ALQTQQQL V
Sbjct: 207 VAKKGAAELGTAAKRINDQSNFVSKLADSLTAGIGALVDADMEEASARLQALQTQQQLGV 266
Query: 434 QALSIVNNSTARILSLFR 451
QALSI N + ILSLFR
Sbjct: 267 QALSIANQAPQTILSLFR 284
>gi|153954737|ref|YP_001395502.1| FlgL [Clostridium kluyveri DSM 555]
gi|219855201|ref|YP_002472323.1| hypothetical protein CKR_1858 [Clostridium kluyveri NBRC 12016]
gi|146347595|gb|EDK34131.1| FlgL [Clostridium kluyveri DSM 555]
gi|219568925|dbj|BAH06909.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 476
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 55/438 (12%), Positives = 121/438 (27%), Gaps = 28/438 (6%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
++ NL +Q ++SS S +D+ + + + A S I +
Sbjct: 13 LSDMKKNLNNLNKIQGQLSSTKNFSKPSDDPLNVQKSMQLNTSITANSQYGTNIKTALTW 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+D + + V+ I++ + D I E+ Q SQL + +
Sbjct: 73 MDTTDVTLGQIGTVLGNIRDNLVKAGNVTYGQDDRDKINDEVNQQVSQLAQLLNTNLGGE 132
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTID------------YYLDPETVLLD 178
+ T S + I + DDNG + L+ ++
Sbjct: 133 YIFGGTQGLSKPVTTETYSITRQVTDDNGNTTTDIYEGCISLKYADKDGSVLEALPQVVS 192
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ G + D +SV + T+ L + +
Sbjct: 193 DDFNVNNWTGKSITFNVKGSSDSTGTDYSLSVNSSDKTVDDVVKDLNSQIQNNSNLKDRI 252
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
I T+ S S S ++ + ++ +
Sbjct: 253 NVVKTNDGNIKFLAVDKSDIIKITTDISDMASSSDKQLSSVAMDNIALDKNIEVSQGVVL 312
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
S + + T + E ++ S T++ + K
Sbjct: 313 SYNATAVEVMQYGEGQGNDIRTLMDRIVHHLAGQVESNTDSSGNTVDENTAGAILGSDGK 372
Query: 359 LAME-------------EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ E ++ ID K +IG+ R+ D + + +
Sbjct: 373 YYIWKEDEAAAKGKLTNEDLADIDAASKQVLKVRSEIGAKEKRMEDLSDQNSSTKINLTE 432
Query: 406 GVGRLVDADMASESTRLS 423
+ ++ D D+ ++ +
Sbjct: 433 TLSKIEDIDVTEKTVEYA 450
>gi|13560136|emb|CAC36202.1| flagelline [Treponema denticola]
Length = 234
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 33/104 (31%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + + + +D IK +G+ +R+ L I
Sbjct: 127 MTAKALGVRNIGDESIMTIETPEKANRAIGTLDEAIKKINKQRADLGAYQNRLELTVVGI 186
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
+ + ++ R+ D DMA E + Q Q L+ N
Sbjct: 187 NIAAENLQASESRIRDVDMAKEMVDYTKNQILTQSGTAMLAQAN 230
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 56/157 (35%), Gaps = 3/157 (1%)
Query: 47 WSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGT 103
++++ M+S L+ S G S + +A+A + + DV+ I+
Sbjct: 1 LAVSEKMRSQIRGLNQASANAQNGISFIQVAEAFLQETTDVIQRIRELSIQSSNGIYSAE 60
Query: 104 DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
D IQ E++QL +++ IA + FNG N L T + F N +
Sbjct: 61 DRLYIQVEVSQLIAEVDRIASHAQFNGMNMLTGRFAQETGENTVTASMWFHIGANMDQRT 120
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
+ + + + + D + +
Sbjct: 121 RAYIGTMTAKALGVRNIGDESIMTIETPEKANRAIGT 157
>gi|325995395|gb|ADZ50800.1| Flagellin [Helicobacter pylori 2018]
Length = 396
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 27/281 (9%), Positives = 74/281 (26%)
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
T+ + +S + G ++ ++ +I + +
Sbjct: 116 FSNTLGVRASYNVMATGGTPVQSGTVRELTINGVEIGTVNDVHKNDADGRLTNAINSVKD 175
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVR 290
+ Q + + A + + G + + + + +G +
Sbjct: 176 RTGVEASMDIQGRINLHSIDGRAISVHAASASGQVFGGGNFAGISGTQHAVIGRLTLTRT 235
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
++ + G Y V+ + ++ + +
Sbjct: 236 DARDIIVSGVNFSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQG 295
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
++ D+ +GS+ + + I + + V+ ++
Sbjct: 296 IGAGVTSLKGAMIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQI 355
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D D A ES S Q A++ N +L L +
Sbjct: 356 RDVDFAEESANFSKYNILAQSGSFAMAQANAVQQNVLRLLQ 396
>gi|5668680|dbj|BAA82632.1| flagellin protein [Borrelia valaisiana]
Length = 311
Score = 93.7 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
NL Q+++SSG R++ A+D+AA ++ + + LS S + + +
Sbjct: 4 NAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQASRNTSKAINFIQTTEG 63
Query: 80 GMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ V+ +K D SIQ EI QL ++ IA + +N + L
Sbjct: 64 NLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQYNQMHMLSN 123
Query: 137 DLGSSTASIAK 147
+ A+
Sbjct: 124 KSAAQNVKTAE 134
Score = 69.8 bits (168), Expect = 9e-10, Method: Composition-based stats.
Identities = 17/198 (8%), Positives = 53/198 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + A T+ G + + A+ S N +
Sbjct: 114 QYNQMHMLSNKSAAQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAITVN 173
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + + +
Sbjct: 174 IYAANVANLFSGEGAQSAQAAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 233
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E +
Sbjct: 234 SLAKIENAIRMVSDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAAT 293
Query: 424 ALQTQQQLAVQALSIVNN 441
Q A+ ++ N
Sbjct: 294 TNSILTQSAMAMIAQANQ 311
>gi|327480027|gb|AEA83337.1| flagellar hook-associated protein FlgL [Pseudomonas stutzeri DSM
4166]
Length = 519
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 46/439 (10%), Positives = 111/439 (25%), Gaps = 23/439 (5%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + L+ N Q+++S+G R+ AD+ + LS
Sbjct: 3 ISTLQAFNNGVAGLQRNYANATRTQEQISTGNRILTPADDPVASVRLLQLDQQQNVLSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ + + + + ++ V+ ++ D KSI +E+ + + +L
Sbjct: 63 NANLTAAKNSLTQEEVTLNSVNTVLQRVRELAVQAGNGGLSAEDRKSIAAELREREDELL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY-YLDPETVLLDS 179
+ + GE G + + + + D G+ ++ +
Sbjct: 123 SLMNTRNARGEYLFSGFQGKTQPFVRAADGSYSYQGDEGQRKLQIASSLNIPISDSGKSI 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + + + + + +
Sbjct: 183 FENVIDSGRFVSSLTSRPAGSTLSVSSPLVQDEVAFRATPGFPAGGIGIRFTSDTDYVVY 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D A PL + S + I+ + S
Sbjct: 243 DLAAPPDFSATPLSKDLVLYSGVVDKQEKTSDKLVFQGVVIQFDGLPVGGENIVVAPAAS 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
VA V + + + + I + + +
Sbjct: 303 RTLVRGDDVAMVSAINSQISDAAAFAQAFPSGSAAIGIEDATAPFKRMTFSTDPESYIEF 362
Query: 360 AMEEMVSFIDTQIKCATAAAGKI---------GSISSRIH-------LQEDFIKLMRDAV 403
+ S + K + G SR +++ ++
Sbjct: 363 EPGQPFS--EDARKTLNELGLSVSLSGSVPNGGIAISREDVQKQGILGTIANLRMALESP 420
Query: 404 EKGVGRLVDADMASESTRL 422
G + DA +A T L
Sbjct: 421 STGNSGVRDA-VAVALTNL 438
Score = 53.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 32/79 (40%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ A+ ++ +D + AA G IG+ + I + + + + L + D A
Sbjct: 428 RDAVAVALTNLDHGMVSVDAARGNIGARLNVIETTQTDNEDVALVNKAVQAELRELDYAE 487
Query: 418 ESTRLSALQTQQQLAVQAL 436
+RLS + A Q+
Sbjct: 488 ALSRLSFQTILLEAAQQSY 506
>gi|288554149|ref|YP_003426084.1| flagellar hook-associated protein 3 (HAP3) [Bacillus pseudofirmus
OF4]
gi|288545309|gb|ADC49192.1| flagellar hook-associated protein 3 (HAP3) [Bacillus pseudofirmus
OF4]
Length = 573
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 59/173 (34%), Gaps = 3/173 (1%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A +A + + NL +QDR+++G + + A+ + ++ ++ +
Sbjct: 9 ANNALRNISSGYANLAQIQDRLATGKKFTRASQDPVVAMNGMRYRTQVTEVTQFKRNLAE 68
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLRDIARGS 126
+ ++ + + + + + I+ + K+I EI QL L I
Sbjct: 69 MYNFMESSDSALGEVNQALQRIRELTVQASNDTYNSNDRKNIIQEIQQLSEHLASIGNTK 128
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
N + T+ ++K G Y + + ++S
Sbjct: 129 VNNKYLFNGTNTSKQPIDLSKLPNYLNRPQFVGVSDTPNPMPYQNLGSYDVES 181
Score = 47.4 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 34/85 (40%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ ++ + + +D + +A +G+ +R+ + E+ + ++ +
Sbjct: 475 DDMEHSSGSKINGYLDRLDKCMDDVLSARANLGARINRVEMIENRVLEQEVIAKRIMSEN 534
Query: 411 VDADMASESTRLSALQTQQQLAVQA 435
DADM L+ ++ + A+
Sbjct: 535 EDADMEQVIIDLTTQESVHRAAMAV 559
>gi|259415571|ref|ZP_05739492.1| flagellin Laf1 [Silicibacter sp. TrichCH4B]
gi|259348801|gb|EEW60563.1| flagellin Laf1 [Silicibacter sp. TrichCH4B]
Length = 281
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 77/146 (52%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ +N NL Q+ +S+G + A DNAA W+I++ M+SD +
Sbjct: 1 MSSILTNNGAMVALQTLKVVNTNLTDTQNAISTGKEIGVAKDNAAVWAISKTMESDIASF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
A+ + + +G + V +A AG + ++ + IK I + IQ++I Q+
Sbjct: 61 EAIEEGLSMGEATVAVASAGAEQIVEKLVEIKELIVSAQAENVSHDKIQTDIESKVDQIE 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
I + FNG N L + + +
Sbjct: 121 SIIGAAQFNGANLLANTIDGTATQMG 146
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 39/63 (61%)
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
RI Q F+ + D++ GV + D DM S RLSALQTQQ+LAVQ+L I N + +L
Sbjct: 218 RIDDQVQFVSKLVDSMTMGVSTMTDTDMEEASARLSALQTQQELAVQSLGIANQAPQALL 277
Query: 448 SLF 450
LF
Sbjct: 278 QLF 280
>gi|225620371|ref|YP_002721628.1| periplasmic flagellar filament protein FlaB3 [Brachyspira
hyodysenteriae WA1]
gi|225215190|gb|ACN83924.1| periplasmic flagellar filament protein FlaB3 [Brachyspira
hyodysenteriae WA1]
Length = 256
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 64/168 (38%), Gaps = 3/168 (1%)
Query: 24 LEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSK 83
+ ++SSG+R++ A D+A+ ++++ M+S L + G S + + +++
Sbjct: 1 MTKTIAQLSSGMRINTAGDDASGLAVSEKMRSQYRGLQQATRNAQNGISFIQTTEGYLNE 60
Query: 84 AIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGS 140
++M ++ +D IQ E+ QL +++ IA + FN N L +
Sbjct: 61 TTNIMQRMRELAIQSANGIYSDSDRALIQVEVNQLVAEVDRIASQAEFNKMNMLTGRFAA 120
Query: 141 STASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
+ IG+ + + L S +
Sbjct: 121 DGQTPMTFHIGANMDQRVSINIGSMTAANLQVGGDTPISISSVETANQ 168
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 61/229 (26%)
Query: 220 KKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ + L+ A +S + S +
Sbjct: 25 AVSEKMRSQYRGLQQATRNAQNGISFIQTTEGYLNETTNIMQRMRELAIQSANGIYSDSD 84
Query: 280 IRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGY 339
+ ++ + I S + + + + + D I+ G
Sbjct: 85 RALIQVEVNQLVAEVDRIASQAEFNKMNMLTGRFAADGQTPMTFHIGANMDQRVSINIGS 144
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
+ + + + ID I+ + ++G++ +R+ + +
Sbjct: 145 MTAANLQVGGDTPISISSVETANQALGRIDEGIQMVVSQRAELGAVQNRMESMVKSLMIA 204
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + DADMAS + Q QQ L+ N I+
Sbjct: 205 TENTIASESVIRDADMASAMVAYTREQILQQTGAAMLANANMKNQSIMR 253
>gi|254464373|ref|ZP_05077784.1| flagellin domain protein [Rhodobacterales bacterium Y4I]
gi|206685281|gb|EDZ45763.1| flagellin domain protein [Rhodobacterales bacterium Y4I]
Length = 274
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 57/144 (39%), Positives = 86/144 (59%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN+ AM A Q L+ +N +LE Q+++S+G V A DN+A W+I++ M+SD A
Sbjct: 1 MTSILTNNGAMVALQTLKTVNNSLEDTQNQISTGKEVGSAKDNSAVWAISKTMESDIQAY 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AVSDA+ G + V +A +G + +DV+ +K I + D IQ++IT+ Q Q+
Sbjct: 61 KAVSDALDFGEATVAVASSGAEQIVDVLKEMKALIVSANSENVDHTKIQNDITKKQEQIT 120
Query: 121 DIARGSSFNGENWLRTDLGSSTAS 144
I + FNG N L + + AS
Sbjct: 121 AIIGSAEFNGANLLNATVDGTAAS 144
Score = 73.6 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 53/97 (54%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ID I A A +G+ S RI Q DF+ + D+++ GV + D +
Sbjct: 178 ITDATTAATALGEIDVLIAGAINDAAALGADSQRIADQGDFVSKLTDSLKSGVSTMTDTN 237
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
M S RL ALQTQQQLAVQ+LSI N + + + LFR
Sbjct: 238 MEEASARLKALQTQQQLAVQSLSIANQAPSTLQQLFR 274
>gi|311031939|ref|ZP_07710029.1| flagellar hook-associated protein FlgL [Bacillus sp. m3-13]
Length = 292
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 79/256 (30%), Gaps = 4/256 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++ ++L + + +++S+G ++S +D+ +++ L +
Sbjct: 10 QNSLRQLSTSYSKMGKLMEQLSTGKKISRPSDDPVVAMKGMYYRTNLTELEQYKRNLSES 69
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSS 127
+ ++ ++A + VM + + G D +++ EI QL+ +A +
Sbjct: 70 YAWMENSEAALDHVQSVMHRARELVVQGSNDTYSPEDRQAMAKEIEQLKHDFVQVA-NTQ 128
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
G+ + S +++ + L +
Sbjct: 129 VAGKYIFNGTAIDKPRITDANDPTSVSTENSPFEVEVSRGIKLQSNINSENVFNKDMMEI 188
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
++ + LKD+ ++ TIS ++ +L N Q
Sbjct: 189 WNGLQSALETSDTDALKDLMGRFDKSADTISAERSELGARYNRLEMVDNRIGYQEVVATR 248
Query: 248 IPVPLPAAPAAPNTTS 263
I A T
Sbjct: 249 ILSDNEDADIEKVITD 264
Score = 45.9 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 23/264 (8%), Positives = 70/264 (26%)
Query: 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKK 221
Q L + E+ + + +P V + + K+
Sbjct: 5 QSMLTQNSLRQLSTSYSKMGKLMEQLSTGKKISRPSDDPVVAMKGMYYRTNLTELEQYKR 64
Query: 222 FKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR 281
+ + A Q+ + + + + + +K
Sbjct: 65 NLSESYAWMENSEAALDHVQSVMHRARELVVQGSNDTYSPEDRQAMAKEIEQLKHDFVQV 124
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
+I + V + + E + + +
Sbjct: 125 ANTQVAGKYIFNGTAIDKPRITDANDPTSVSTENSPFEVEVSRGIKLQSNINSENVFNKD 184
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ + ++ A+++++ D +A ++G+ +R+ + ++ I
Sbjct: 185 MMEIWNGLQSALETSDTDALKDLMGRFDKSADTISAERSELGARYNRLEMVDNRIGYQEV 244
Query: 402 AVEKGVGRLVDADMASESTRLSAL 425
+ + DAD+ T L++
Sbjct: 245 VATRILSDNEDADIEKVITDLTSQ 268
>gi|167647216|ref|YP_001684879.1| flagellin domain-containing protein [Caulobacter sp. K31]
gi|167349646|gb|ABZ72381.1| flagellin domain protein [Caulobacter sp. K31]
Length = 277
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN AM A Q L IN +L +++G +S DN A W+IAQ +S+ +L A
Sbjct: 5 SVNTNVGAMIALQSLNAINRDLSDTLRHIATGFAISSPKDNPAVWAIAQNQRSEAKSLDA 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQSQL 119
V ++ G S D+A A D++ ++ K+ A + T K++ + L+ Q+
Sbjct: 65 VRASLQRGQSITDVALAAGETVTDLLGQMREKMLAASDTSLSTTSRKALNDDYLSLKRQI 124
Query: 120 RDIARGSSFNGENW 133
+ FNG N
Sbjct: 125 DRTVGTADFNGVNL 138
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 56/88 (63%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ + I T+A +G+ S + FI ++D ++ VGRLVDADMA E+T+L A
Sbjct: 190 IKAMGGAIDKVTSALAHLGTGSFALETHMSFIDKLQDTLDASVGRLVDADMAKEATKLQA 249
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFRG 452
LQ +QQLA+++LSI N++ + +L LF G
Sbjct: 250 LQIKQQLAIKSLSIANSAPSYLLKLFGG 277
>gi|295986931|gb|ADG64885.1| flagellin [Clostridium chauvoei]
Length = 195
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 56/171 (32%), Gaps = 3/171 (1%)
Query: 41 ADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE 100
D+AA +I++ M+ L S G S + A+ + + ++ ++
Sbjct: 1 GDDAAGLAISEKMRGQIRGLDQASRNAQDGISLIQTAEGALXETHSILQRMRELSVQSAN 60
Query: 101 RGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157
D +IQ EI L ++ I+ + FN + L A S +
Sbjct: 61 DTNVAVDRTAIQDEINSLTEEINRISGDTEFNTQKLLDGGFKGEFQIGANSNQTVKLDIG 120
Query: 158 NGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
N + E+ L +++ + + + + + +
Sbjct: 121 NMSAASLGLTTTNSLESKALALNSNLADGSYKISGTNLVDTNGNTVGTFNS 171
>gi|225851152|ref|YP_002731386.1| flagellar filament 34.5 kDa core protein (Class B) [Persephonella
marina EX-H1]
gi|225646365|gb|ACO04551.1| flagellar filament 34.5 kDa core protein (Class B) [Persephonella
marina EX-H1]
Length = 288
Score = 93.3 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 45/140 (32%)
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ ++ + + +G + T+ I + + A V +D
Sbjct: 149 NIHYGGRTNQNLQISIGVAVATAGSTGTAASTVQIGASSYSIDVTTSTAANTSVQTVDNL 208
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
IK K+GS + + R + R+ + DMA E + + Q Q
Sbjct: 209 IKAVDDLNAKLGSYQIELEKIISNNETQRINTSEAESRIRNVDMAKEMSAFTKYQILMQS 268
Query: 432 AVQALSIVNNSTARILSLFR 451
L+ N +L L R
Sbjct: 269 GTAMLAQANQVPQMVLQLLR 288
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 66/202 (32%), Gaps = 2/202 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N+ A L+ ++L +R+++G R++ AAD+AA IA +K+ +L
Sbjct: 6 INYNYQADFTLNNLKKTEFSLNKSLERLATGYRINRAADDAAGLYIADQLKTYAVSLEQG 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER--GTDSKSIQSEITQLQSQLRD 121
+ G S I + +++ ++++ +K K+ IQ +I L +
Sbjct: 66 TRNAQDGVSIAQIGQGSLTEVYNILNDVKAKVIQASNTLDSNARAQIQQDINSLVDAISK 125
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I + FNG + +T+ + +
Sbjct: 126 IFSDTEFNGIQLFASTASLATSFNIHYGGRTNQNLQISIGVAVATAGSTGTAASTVQIGA 185
Query: 182 DGTERYGLLDRNHKIKVEPQVL 203
V+
Sbjct: 186 SSYSIDVTTSTAANTSVQTVDN 207
>gi|298529919|ref|ZP_07017321.1| flagellar hook-associated protein 3 [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509293|gb|EFI33197.1| flagellar hook-associated protein 3 [Desulfonatronospira
thiodismutans ASO3-1]
Length = 645
Score = 93.3 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 44/126 (34%), Gaps = 3/126 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ + + Q + L + + SS +V+ +D+ S + AL
Sbjct: 3 VSHSMMYDNFMQNMNRSTTELMELNKQASSQKKVNKPSDDPVGMSRILGYRDSISALDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ +++A + +A +++ K G + + E+ Q+ Q+
Sbjct: 63 QSNVDTAKGWLNLADETLMQASNLLIRAKELAEQGATGTLSPEQREILAGEVEQVFDQML 122
Query: 121 DIARGS 126
++A
Sbjct: 123 NLANTR 128
Score = 64.8 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/342 (8%), Positives = 82/342 (23%), Gaps = 13/342 (3%)
Query: 110 SEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
+E+T + W + + + ++
Sbjct: 297 TEVTYQLETMDGKQISEDPQRLQWDEDRDAYKIQFSMEDDEENEEDQEQITIRFDPDFDP 356
Query: 170 LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
LD + D D + + K + + + V
Sbjct: 357 LDSGQISFDEDDDPKLWFMPTRPAVEYKGDDEDTNNFSVYAEKLEKDDVEVFGSFDKNVN 416
Query: 230 AWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
+ +G A + + + + + + + V
Sbjct: 417 LRIDKKIDEDGNVEGEDADYSGGDLARIEYSYSLDGGSTWNEGNTTTNNRFMVPGGRVEV 476
Query: 290 RATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRH 349
T D A + D + + +
Sbjct: 477 EDDLDRLSTGDQINIRPHKASINFEISAGDNIQVNGIGKDIFGGIYKNSDGEYVKDPEGP 536
Query: 350 ANTDAY----------NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
N +++ ++ ++ ID +K ++ +G+ +R+ + + +
Sbjct: 537 ENVFETLGELIGYLENDDEEGIQRSLANIDDTLKHISSELASVGARENRLDVASTVLSGL 596
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQL---AVQALSI 438
++ + ++ D D+A +RL Q + + +
Sbjct: 597 EHNEKERLSKIEDVDVAELMSRLMNQQMTYEAVLRSSSMIMQ 638
>gi|312109476|ref|YP_003987792.1| flagellar hook-associated protein 3 [Geobacillus sp. Y4.1MC1]
gi|311214577|gb|ADP73181.1| flagellar hook-associated protein 3 [Geobacillus sp. Y4.1MC1]
Length = 298
Score = 93.3 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 48/139 (34%), Gaps = 3/139 (2%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A + + L + L Q+++ +G ++S +D+ + D + IG
Sbjct: 9 ANNMLRNLSNSYERLGKYQEQLVTGKKISRPSDDPVVAMKGIAYREDLARVKQYQRNIGE 68
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGS 126
+ +D A + K + ++ + D K I EI Q+Q + D+A
Sbjct: 69 VHNWIDSADDALDKVGLALQRVQELVVQASTDTATPEDRKKIADEIDQIQKHIVDVANTK 128
Query: 127 SFNGENWLRTDLGSSTASI 145
+ D +
Sbjct: 129 VGGKYIFNGADTKNPLFIG 147
Score = 45.1 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 31/80 (38%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + +S ++ Q AA ++G+ +R+ + E+ + K + D +
Sbjct: 205 STGNTISSHLSQVEAQQDALLAARSELGAKQNRVEMMENRLSTQEVIATKLMSNNEDIEY 264
Query: 416 ASESTRLSALQTQQQLAVQA 435
T L ++ + A+
Sbjct: 265 EKTITDLITQESVHRAALSV 284
>gi|295687862|ref|YP_003591555.1| flagellin domain-containing protein [Caulobacter segnis ATCC 21756]
gi|295429765|gb|ADG08937.1| flagellin domain protein [Caulobacter segnis ATCC 21756]
Length = 274
Score = 93.3 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +A +A + L + + ++SSG R+ A D+A+ +IA M +D AL
Sbjct: 1 MPVISTNTAANTALRYLNNNSAAQSESLAKLSSGSRIVSAKDDASGLAIATSMNADISAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQS 117
+ + + G+S ++ A +S D+++ + D I +E +QL
Sbjct: 61 NQAATNVTSGTSVLNTADGALSNIADILTRMNALTAQAQSGSSSDDDLSYITAEYSQLME 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTAS 144
++ DIA ++FNG L ST
Sbjct: 121 EIDDIATTTTFNGVALLDGTSAYSTGV 147
Score = 75.2 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 66/222 (29%)
Query: 230 AWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
+ + V A A N + + + A + +
Sbjct: 53 MNADISALNQAATNVTSGTSVLNTADGALSNIADILTRMNALTAQAQSGSSSDDDLSYIT 112
Query: 290 RATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRH 349
++ D T +T V + +I + T
Sbjct: 113 AEYSQLMEEIDDIATTTTFNGVALLDGTSAYSTGVDFMVGTSSTDIITVTLDGADTTTLG 172
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
T A + + + ID I + +G+ SR + D I + ++
Sbjct: 173 LTTTAITDSATAQSAMEEIDAAITTVSEMRANVGASLSRFEFRGDVISTSLENLKSAESS 232
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D+ASE T + QT A+ ALS N+ + +L L +
Sbjct: 233 ISGVDIASEQTNFTNYQTLTSAAISALSQANSMSQSLLKLLQ 274
>gi|75763357|ref|ZP_00743095.1| Flagellin [Bacillus thuringiensis serovar israelensis ATCC 35646]
gi|74489148|gb|EAO52626.1| Flagellin [Bacillus thuringiensis serovar israelensis ATCC 35646]
Length = 119
Score = 93.3 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++M + +R + DR+SSG R++ A+D+AA +IA MK+ G L+
Sbjct: 40 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINSASDDAAGLAIATRMKAREGGLNVA 99
Query: 64 SDAIGLGSSKVDIAKAGMSK 83
G S + + S+
Sbjct: 100 GRNTQDGMSLIRTLDSPYSE 119
>gi|312622117|ref|YP_004023730.1| flagellar hook-associated protein 3 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202584|gb|ADQ45911.1| flagellar hook-associated protein 3 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 315
Score = 93.3 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 57/161 (35%), Gaps = 3/161 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + L L+ +Q ++++G ++ +DN + + +++D + +
Sbjct: 3 ITNNMMVNNFLINLNKNLSRLDDIQYKMATGKKIRYPSDNPVITARSLRLRTDVSEIEQL 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ S VD ++ ++ + + ++ G D I E+ Q++ +
Sbjct: 63 QKNVDDAISWVDTTESALADINESLQRVRELAVRGANGTNTKEDMAQIAKEVAQIKQHII 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV 161
+ + + ++ + S + D G
Sbjct: 123 QVGNTNYAGRYIFSGFKTDTAPINSDGSFSDTNSFDSTGGY 163
Score = 54.7 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 35/82 (42%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ ++ ++S ID I A G +G++ +R+ L ++ + + D DMA
Sbjct: 222 DATSVNSLLSDIDRHIDNVVAQRGDVGALQNRLELIKNRLSDDNVNFTTLLSNNEDVDMA 281
Query: 417 SESTRLSALQTQQQLAVQALSI 438
+L + + A+Q +
Sbjct: 282 EIIMQLKTAENVYRAALQTGAQ 303
>gi|269103182|ref|ZP_06155879.1| flagellar hook-associated protein FlgL [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268163080|gb|EEZ41576.1| flagellar hook-associated protein FlgL [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 412
Score = 93.3 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 57/441 (12%), Positives = 119/441 (26%), Gaps = 42/441 (9%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I T + + L L +++++G RV + D+ Q K +
Sbjct: 1 MSRISTLSQYNNLTSNLMRKQTQLSHTNNQLATGKRVDTSGDDPVSSISIQNYKQQLTQI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
DAI L ++++ + + ++ D + K K+ + D K+ + E+ L
Sbjct: 61 GQYKDAITLANNRLGVLETNIAGVEDNLDVTKQKVLGMLNGAMAANDRKAFKDELQSLYD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
L +A G + + I K ++ D + + +
Sbjct: 121 GLLSLANSKDEAGNYIFAGNQMDTKPFIEKDGYMTYQGDSQSRQTQIDSNMNVKTSLPGD 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
D YG N E + +
Sbjct: 181 QVFMDIPNPYGDFRPNFAGLTEGSKAHVLSADIS-------------------------- 214
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
F +AK I T + + + + + T +
Sbjct: 215 DFSKAKAIQVSFSDGGTTAGPNGETVKVTNYSLSIDGTEVVKDQPYDPEKGIEYTGSTAG 274
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + DS + D+ S
Sbjct: 275 DPTLNLKFAEMQDGDTITLQPAQSFNIFDSIQAAITYADAPTSSPE-------------A 321
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ ++ +D ++GSI ++ Q++ + G L D D +S
Sbjct: 322 QANLQRVIDDLDAGFVHMNQQRSEVGSIMKQVERQQEQHLDFELTLNTAHGGLEDLDYSS 381
Query: 418 ESTRLSALQTQQQLAVQALSI 438
L+ Q + A S
Sbjct: 382 AVLDLNQQAMALQASQAAFSQ 402
>gi|297544026|ref|YP_003676328.1| flagellar hook-associated protein 3 [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296841801|gb|ADH60317.1| flagellar hook-associated protein 3 [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 297
Score = 93.3 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 49/144 (34%), Gaps = 3/144 (2%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ L+ Q+ +S+G ++S +D+ + + +++D A + S
Sbjct: 13 LNNYHNNLEKLQKNQNMLSTGKKISRPSDDPVAVATSLRIRTDIARNDAYTKNADEVQSW 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIARGSSFNG 130
+D+ + + D++ + G +Q EI QL++Q+ +
Sbjct: 73 LDMTDTALGQLGDLLQRTRELAVEGANGTLTQADMQKIAEEIEQLKAQMIQVGNTQYNGR 132
Query: 131 ENWLRTDLGSSTASIAKSVIGSFI 154
+ + S +
Sbjct: 133 YIFAGFKTTTQPFSEDNNSYNGDN 156
Score = 49.7 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 23/183 (12%), Positives = 57/183 (31%)
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + +A A + + G TT +
Sbjct: 88 QRTRELAVEGANGTLTQADMQKIAEEIEQLKAQMIQVGNTQYNGRYIFAGFKTTTQPFSE 147
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
D N + + + +G S + + + + +
Sbjct: 148 DNNSYNGDNGLIEFEVGAGGNKIAVNVPGDKVFDVDLTGTSQLLVMMDNLKSALDSGDHQ 207
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A+ +++ +D Q++ A ++G+ S+R+ L ++ ++ + + DAD+A
Sbjct: 208 AVSNLIADVDKQLENVLAVRAEVGAKSNRVDLIKNRLQDDNYNFTVLLSKNEDADLAQVI 267
Query: 420 TRL 422
T L
Sbjct: 268 TNL 270
>gi|255600300|ref|XP_002537428.1| Lateral flagellin, putative [Ricinus communis]
gi|223516384|gb|EEF24955.1| Lateral flagellin, putative [Ricinus communis]
Length = 219
Score = 93.3 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 78/206 (37%), Gaps = 3/206 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN +++S L +L +Q + +G RV+ A D+AA IA + +
Sbjct: 1 MLSLHTNAASLSTQTSLDKTQRSLSSLQTSLGTGYRVNSAMDDAAGLQIATRLDAQTRGQ 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ S A+ ++ ++ +K+ T + + ++QSE L
Sbjct: 61 AVAMRNTQNSISLAQTAEGAFNEVTSILERMKDLATQAADASSTTSAQSAMQSEYDALGK 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L +I + +SFNG+N L +++A+ + + +D+ D V
Sbjct: 121 ELNNIMKNTSFNGQNILMGTGVATSAAAGTLGTSLTFQIGASSAETMAVDFSTDLNAVDG 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVL 203
+ G ++
Sbjct: 181 KITAATATYTGTATVGTELMTGTSAN 206
>gi|259417066|ref|ZP_05740985.1| flagellin Laf1 [Silicibacter sp. TrichCH4B]
gi|259345972|gb|EEW57786.1| flagellin Laf1 [Silicibacter sp. TrichCH4B]
Length = 282
Score = 92.9 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 54/181 (29%), Positives = 88/181 (48%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ +N +L Q +S+G + A DN+A W+I++ M+SD
Sbjct: 1 MSSILTNNGAMVALQTLKSVNNDLNDTQKAISTGKEIGVAKDNSAVWAISKTMESDIAGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
A+ + + +G + V +A AG + ++ ++ IK I + D IQ +I+ Q+
Sbjct: 61 EAIEEGLSIGEATVAVASAGAEQIVEKLTEIKELIVSAQSENVDHGKIQDDISSKVDQVA 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FNG N L TD+ + A+ + G V I LD S
Sbjct: 121 AIISAAQFNGANLLATDVDGNGATNVGVLASLDRVGAGGTVSAVEITIDSVDFEGDLDLS 180
Query: 181 T 181
+
Sbjct: 181 S 181
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 54/84 (64%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
I+T ++ A A +G+ S+R+ Q +F+ + D++ GV + D DM S RLSALQT
Sbjct: 199 IETFLQTAITGAAALGADSARLDDQSEFVSNLVDSMTMGVSTMTDTDMEEASARLSALQT 258
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
QQ+LAVQ+L+I N + +L LFR
Sbjct: 259 QQELAVQSLTIANEAPGSLLQLFR 282
>gi|220927555|ref|YP_002504464.1| flagellar hook-associated protein FlgL [Clostridium cellulolyticum
H10]
gi|219997883|gb|ACL74484.1| flagellar hook-associated protein 3 [Clostridium cellulolyticum
H10]
Length = 309
Score = 92.9 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 35/289 (12%), Positives = 82/289 (28%), Gaps = 4/289 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + L + L Q+++ +G ++ +D+ + A +++D +
Sbjct: 3 ITNNMLISNMLTALGNNESRLSKYQNQLHTGKKIQLPSDDPIVAARALKLRTDVSKIEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLR 120
+G S VD A +++ D++ K T E+ QL+ QL
Sbjct: 63 QKNLGDAQSWVDATDAALAQIGDILKRAKELATQAANGTNSITETSDIGQEMKQLKVQLV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA ++++G +F + + +T + ++ +
Sbjct: 123 HIA-NTTYSGRYMFSGFKTDQKLIEDDETSANFGKFEIDVNTVTEKIQFEIGAGDNININ 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + + +V SG + +L+ D
Sbjct: 182 VAGGDIFNSGGNAVNGGEPAMIALFTNVIADLDSGDNAGVSSQLSQFDQQIDNLLRVRAD 241
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
I + + A +++
Sbjct: 242 IGARQNRIDLSADRMSNDLVNMTSLMSKNEDVDPAETIMNLKNEENVYQ 290
Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 35/121 (28%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
++ D ++ G + T + + +S D QI
Sbjct: 174 AGDNININVAGGDIFNSGGNAVNGGEPAMIALFTNVIADLDSGDNAGVSSQLSQFDQQID 233
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
IG+ +RI L D + + + + D D A L + Q ++
Sbjct: 234 NLLRVRADIGARQNRIDLSADRMSNDLVNMTSLMSKNEDVDPAETIMNLKNEENVYQASL 293
Query: 434 Q 434
Sbjct: 294 A 294
>gi|239828339|ref|YP_002950963.1| flagellar hook-associated protein FlgL [Geobacillus sp. WCH70]
gi|239808632|gb|ACS25697.1| flagellar hook-associated protein 3 [Geobacillus sp. WCH70]
Length = 301
Score = 92.9 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 51/141 (36%), Gaps = 3/141 (2%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A + + L NL Q+++S+G +++ +D+ +++ + +
Sbjct: 9 ANNMLKHLSTSYANLGKYQEQLSTGKKINRPSDDPVVAMKGMAYRTNLTEVEQLKRNFSE 68
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGS 126
+ ++ + A + KA + I+ + ++I EI QL L IA
Sbjct: 69 AYNWIENSDAALDKATQALQRIRELVVQAGNDTYEATQRQAISQEIKQLTEHLVTIANSK 128
Query: 127 SFNGENWLRTDLGSSTASIAK 147
+ + T+ +
Sbjct: 129 VGDKYIFNGTNTLQPPVQMNG 149
Score = 45.9 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 25/192 (13%), Positives = 52/192 (27%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A + + + N ++ + + TS
Sbjct: 96 QAGNDTYEATQRQAISQEIKQLTEHLVTIANSKVGDKYIFNGTNTLQPPVQMNGTSITTS 155
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
N+ K+ + L + D + E
Sbjct: 156 NNTEEVKIELAKGIYIAVNVNPTEVFHYDASQKGKGLFSDLQSLANDLDDPNKTGKDINE 215
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ +ID I +A ++G+ +R+ L E+ I +K + D DM T L
Sbjct: 216 YLGYIDQHISKLLSARAELGARMNRVELMEERIGQQEIIAQKMLSDNEDVDMERVITDLK 275
Query: 424 ALQTQQQLAVQA 435
++ + A+
Sbjct: 276 VQESVHRAALAV 287
>gi|312793869|ref|YP_004026792.1| flagellar hook-associated protein 3 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181009|gb|ADQ41179.1| flagellar hook-associated protein 3 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 315
Score = 92.9 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 18/161 (11%), Positives = 58/161 (36%), Gaps = 3/161 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + L L+ +Q ++++G ++ +D+ + + +++D + +
Sbjct: 3 ITNNMMVNNFLINLNKNLSRLDDIQYKMATGKKIRYPSDDPVITARSLRLRTDVSEIEQL 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ +S VD ++ ++ + + ++ G D I E+ Q++ +
Sbjct: 63 QKNVDDATSWVDTTESALADINESLQRVRELAVRGANGTNTKEDMAQIAKEVAQIKQHII 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV 161
+ + + ++ + S + +G
Sbjct: 123 QVGNTNYAGRYIFSGFKTDTAPLNSDGSFSDTGGFTSSGGY 163
Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 34/82 (41%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + ++S ID I A G +G++ +R+ L ++ + + D DMA
Sbjct: 222 DVNTVNSLLSDIDRHIDNVVAQRGDVGALQNRLELIKNRLSDDNVNFTTLLSNNEDVDMA 281
Query: 417 SESTRLSALQTQQQLAVQALSI 438
+L + + A+Q +
Sbjct: 282 EIIMQLKTAENVYRAALQTGAQ 303
>gi|295986929|gb|ADG64884.1| flagellin [Clostridium chauvoei]
Length = 195
Score = 92.9 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 57/171 (33%), Gaps = 3/171 (1%)
Query: 41 ADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE 100
D+AA +I++ M+ L S G S + A+ +++ ++ ++
Sbjct: 1 GDDAAGLAISEKMRGQIRGLDQASRNAQDGISLIQTAEGALAETHSILQRMRELSVQSAN 60
Query: 101 RGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157
D +IQ EI L ++ I+ + FN + L A S +
Sbjct: 61 DTNVAVDRTAIQDEINSLTEEINRISGDTEFNTQKLLDGGFKGEFQIGANSNQTVKLDIG 120
Query: 158 NGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
N + E+ L +++ + + + + + +
Sbjct: 121 NMSAASLGLTTTNSLESKALALNSNLADGSYKISGTNLVDTNGNTVGTFNS 171
>gi|326386984|ref|ZP_08208594.1| flagellin-like protein [Novosphingobium nitrogenifigens DSM 19370]
gi|326208165|gb|EGD58972.1| flagellin-like protein [Novosphingobium nitrogenifigens DSM 19370]
Length = 293
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 66/165 (40%), Gaps = 3/165 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN SA+ A+ + V R+S+G R++ AAD+AA +I+ M + +
Sbjct: 4 MTVINTNISAIRAAAASNSATQLMGVAMQRLSTGKRINSAADDAAGLAISTTMTAQIDGM 63
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQS 117
G S A +++ +++ I+ + +D ++Q+E++ L
Sbjct: 64 QQGVSNSNDGISMAQTADGALNEVTNMLQRIRQLAVQAGSDTYQASDRTAMQTEVSNLTE 123
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
Q+ DI ++FNG + + V
Sbjct: 124 QISDILNNTAFNGNKLFNVVGTTPATTDDLKFSIQTGSQSGDAVT 168
Score = 82.9 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 47/139 (33%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ + + T + + + A +S +DT +
Sbjct: 155 FSIQTGSQSGDAVTLVSKAFDGSALFGTGNTSYSSAATQSLDVSTTTAAATTISNVDTAL 214
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A +G+ +R+ + + R+ D D ++E+T+++ Q Q +
Sbjct: 215 AAVNATQSGMGAGENRLQSVVSNLTDNITNLTDARSRIQDTDYSTETTKMAKAQILAQAS 274
Query: 433 VQALSIVNNSTARILSLFR 451
++ N + +LSL +
Sbjct: 275 TAMIAQANQAQQYVLSLLK 293
>gi|329906610|ref|ZP_08274458.1| Flagellin protein FlaA [Oxalobacteraceae bacterium IMCC9480]
gi|327547215|gb|EGF32071.1| Flagellin protein FlaA [Oxalobacteraceae bacterium IMCC9480]
Length = 99
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 41/99 (41%)
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
+ + ++ +D+ + ++ +G+ +R ++ + + R+ D
Sbjct: 1 MNISTVAGAQTAIASLDSALATINSSRASLGAYQNRFASAITSLQTTTENLSASRSRIED 60
Query: 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D A+E+ L+ Q QQ L+ N+ +L+L R
Sbjct: 61 TDFAAETASLTRGQILQQAGTAILAQANSLPNGVLALLR 99
>gi|116619468|ref|YP_821624.1| flagellin domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222630|gb|ABJ81339.1| flagellin domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 896
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN +++ A + LR + R++SG R++ +AD+AA +IA ++D L+
Sbjct: 4 SIQTNVNSVVAQENLRVNSNFQAQTIQRLTSGYRINSSADDAAGLAIANKFRNDTAELTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER--GTDSKSIQSEITQLQSQLR 120
G S++ I GM+ ++ +K T D + E L ++
Sbjct: 64 GVRNANDGVSQLQIMDGGMNNIGKMLDRLKTLATQSASDSFTGDRSVLNKEYQTLVGEID 123
Query: 121 D 121
Sbjct: 124 R 124
Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 52/143 (36%)
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ ST S + T + ++ + K + V +
Sbjct: 754 NNFSVGVGTANNSTAQVSVGMFDGTAGATAKQGTTVQSGNSGAADISTKDGATQAVITLG 813
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+K A IG +++ + ++ DAD+A+E+ L+ Q Q
Sbjct: 814 NAVKQLGVAQAAIGKGQNQLSYAIGLAQSQISNFSAAQSQIRDADVAAEAANLTKAQVLQ 873
Query: 430 QLAVQALSIVNNSTARILSLFRG 452
Q ++ A++ N++ +++L RG
Sbjct: 874 QASMAAMAQANSAPQAVMALLRG 896
>gi|312877568|ref|ZP_07737527.1| flagellar hook-associated protein 3 [Caldicellulosiruptor
lactoaceticus 6A]
gi|311795643|gb|EFR12013.1| flagellar hook-associated protein 3 [Caldicellulosiruptor
lactoaceticus 6A]
Length = 315
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 18/161 (11%), Positives = 58/161 (36%), Gaps = 3/161 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + L L+ +Q ++++G ++ +D+ + + +++D + +
Sbjct: 3 ITNNMMVNNFLINLNKNLSRLDDIQYKMATGKKIRYPSDDPVITARSLRLRTDVSEIEQL 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ +S VD ++ ++ + + ++ G D I E+ Q++ +
Sbjct: 63 QKNVDDATSWVDTTESALADVNESLQRVRELAVRGANGTNTKEDMAQIAKEVAQIKQHII 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV 161
+ + + ++ + S + +G
Sbjct: 123 QVGNTNYAGRYIFSGFKTDTAPLNSDGSFSDTGGFTSSGGY 163
Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 34/82 (41%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + ++S ID I A G +G++ +R+ L ++ + + D DMA
Sbjct: 222 DVNTVNSLLSDIDRHIDNVVAQRGDVGALQNRLELIKNRLSDDNVNFTTLLSNNEDVDMA 281
Query: 417 SESTRLSALQTQQQLAVQALSI 438
+L + + A+Q +
Sbjct: 282 EIIMQLKTAENVYRAALQTGAQ 303
>gi|73666367|gb|AAZ79860.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Livingstone]
gi|73666369|gb|AAZ79861.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Livingstone]
gi|73666371|gb|AAZ79862.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Livingstone]
gi|73666373|gb|AAZ79863.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Livingstone]
Length = 174
Score = 92.9 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 32 SSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTI 91
SSGLR++ A D+AA +IA ++ L+ S G S + +++ + + +
Sbjct: 1 SSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQRV 60
Query: 92 KNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
+ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGAN 119
>gi|329298110|ref|ZP_08255446.1| flagellin-like protein [Plautia stali symbiont]
Length = 301
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 42/91 (46%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ ++ +D I + ++G++++R+ + A+ R+ DAD A+E
Sbjct: 209 HPDDPLATLDRAIGQIDSQRTRLGAVANRLLSAQTLQGNATAAIAASRSRIEDADYATEV 268
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ LS Q QQ + L+ N ++L L
Sbjct: 269 SSLSRQQILQQASSALLAQANQLPQQVLKLL 299
>gi|116619470|ref|YP_821626.1| flagellin domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222632|gb|ABJ81341.1| flagellin domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 896
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN +++ A + LR + R++SG R++ +AD+AA SIA ++D L+
Sbjct: 4 SIQTNVNSIVAQENLRVNSNFQGQTIQRLTSGYRINSSADDAAGLSIANKFRNDTAELTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER--GTDSKSIQSEITQLQSQLR 120
G S++ I GM+ ++ +K T D + E L +++
Sbjct: 64 GVRNANDGVSQLQIMDGGMNNIGKMLDRLKTLATQSASDSFTGDRSVLNKEYQTLVNEID 123
Query: 121 D 121
Sbjct: 124 R 124
Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 52/143 (36%)
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ ST S + T + ++ + K + V +
Sbjct: 754 NNFSVGVGTANNSTPEISAGMFDGTAGATARQGTTVQSGNSGAADISTKDGATQAVITLG 813
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+K A IG +++ + ++ DAD+A+E+ L+ Q Q
Sbjct: 814 NAVKQLGVAQAAIGKGQNQLSYAIGLAQSQISNFSAAQSQIRDADVAAEAANLTKAQVLQ 873
Query: 430 QLAVQALSIVNNSTARILSLFRG 452
Q ++ A++ N++ +++L RG
Sbjct: 874 QASMAAMAQANSAPQAVMALLRG 896
>gi|13786773|pdb|1IO1|A Chain A, Crystal Structure Of F41 Fragment Of Flagellin
Length = 398
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/398 (8%), Positives = 83/398 (20%), Gaps = 43/398 (10%)
Query: 53 MKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQ 109
++ L+ S G S + +++ + + ++ SIQ
Sbjct: 1 FTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQ 60
Query: 110 SEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
+EITQ +++ ++ + FNG L D + A I Q +D
Sbjct: 61 AEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTL 120
Query: 170 LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
+ + + Y + + G + +
Sbjct: 121 NVQQKYKVSDTAATVTGYADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKYYAK 180
Query: 230 AWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
+ + + + + + +
Sbjct: 181 VTVTGGTGKDGYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVKNVQVANADLTEAK 240
Query: 290 RATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRH 349
A T +T + D + D S+ T T
Sbjct: 241 AALTAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTAD 300
Query: 350 ANTDAY----------------------------------------NEKLAMEEMVSFID 369
T E + ID
Sbjct: 301 DGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKID 360
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
+ + ++ +R + + + +
Sbjct: 361 AALAQVDTLRSDLAAVQNRFNSAITNLGNTVNNLTSAR 398
>gi|229132586|ref|ZP_04261434.1| Flagellin [Bacillus cereus BDRD-ST196]
gi|228650818|gb|EEL06805.1| Flagellin [Bacillus cereus BDRD-ST196]
Length = 195
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 19/194 (9%), Positives = 55/194 (28%)
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
T + + + + + T T +
Sbjct: 1 MLRTAEAALQTVTNILQRMRDLAVQSANGTNSNTNRNSLNKEFQSLTEQIGYIGETTEFN 60
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
+ L + ++ + + + + + I+ ++ +
Sbjct: 61 DLSAFDGQSRPITLDDIGHTVNIPKSIPPSPTQHDIKISTEQEARVAIRKIEEALQNVSL 120
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+G++ +R+ + + A+ V R+ D DMA E + + ++A+ +S
Sbjct: 121 HRADLGAMINRLQFNIENLNSQSTALTDTVSRIEDTDMAQEMSDFLKFKLLTEVALSMVS 180
Query: 438 IVNNSTARILSLFR 451
N + L +
Sbjct: 181 QANQIPQIVSKLLQ 194
Score = 44.3 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Query: 73 KVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFN 129
+ A+A + +++ +++ T+ S+ E L Q+ I + FN
Sbjct: 1 MLRTAEAALQTVTNILQRMRDLAVQSANGTNSNTNRNSLNKEFQSLTEQIGYIGETTEFN 60
Query: 130 GENWLRTDL 138
+
Sbjct: 61 DLSAFDGQS 69
>gi|300869688|ref|YP_003784559.1| flagellar hook-associated protein FlgL [Brachyspira pilosicoli
95/1000]
gi|300687387|gb|ADK30058.1| flagellar hook-associated protein, FlgL [Brachyspira pilosicoli
95/1000]
Length = 417
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/423 (11%), Positives = 113/423 (26%), Gaps = 31/423 (7%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
A ++ +E Q R+S+G RV +N + ++ +L + I G
Sbjct: 11 RAISSIKKNYSEMEASQTRLSTGQRVQRPHENVTSTINSIYYRTRKSSLDRYQNNIVDGK 70
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
++ +A MS +S ++ G ++ +++ + I
Sbjct: 71 ERLSVAHDSMSSITQALSRARDLAVQGANSTYSAEDRAKMAMEVEEMIERI--------- 121
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
+ + I +T + E+ G
Sbjct: 122 ----------------------YDISKTQSKGEFIFSGTSVKTAPFRALYGHDEKAGRSI 159
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
+ ++ ++ + + T+ + +A A I +
Sbjct: 160 IQTVMYEGDANAQNREIENGQYINVGTPGNYAFWGTNMEIISTVDAGNYVASENQDIMID 219
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + + K S + V
Sbjct: 220 DMVINIKQGDNIEAIVQRINDANGNVSATIGDLRGGAKVIQLKTSTPHKILLQDLKGGTV 279
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
V + + P + SG S+ I + + E + +ID+
Sbjct: 280 LQDIGLVRQGAGNIPENNYEPSAVISGKSLFESLIYLRDAMLNDDVRAIGSEALGYIDSA 339
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I S +R+ + + + + A+++ + + + D A E + Q
Sbjct: 340 IDNVLTVQANASSKVTRLDMGYNSFEDQKLAIDEALAKNENIDYAEEIVNFNMWQYAHNA 399
Query: 432 AVQ 434
+Q
Sbjct: 400 TLQ 402
>gi|167038178|ref|YP_001665756.1| flagellar hook-associated protein FlgL [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167039113|ref|YP_001662098.1| flagellar hook-associated protein FlgL [Thermoanaerobacter sp.
X514]
gi|300913297|ref|ZP_07130614.1| flagellar hook-associated protein 3 [Thermoanaerobacter sp. X561]
gi|307723689|ref|YP_003903440.1| flagellar hook-associated protein 3 [Thermoanaerobacter sp. X513]
gi|320116587|ref|YP_004186746.1| flagellar hook-associated protein 3 [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166853353|gb|ABY91762.1| flagellar hook-associated protein 3 [Thermoanaerobacter sp. X514]
gi|166857012|gb|ABY95420.1| flagellar hook-associated protein 3 [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|300889982|gb|EFK85127.1| flagellar hook-associated protein 3 [Thermoanaerobacter sp. X561]
gi|307580750|gb|ADN54149.1| flagellar hook-associated protein 3 [Thermoanaerobacter sp. X513]
gi|319929678|gb|ADV80363.1| flagellar hook-associated protein 3 [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 297
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 52/144 (36%), Gaps = 3/144 (2%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ L+ Q+ +S+G ++S +D+ + + +++D A + S
Sbjct: 13 LNNYHNNLEKLQKNQNMLSTGKKISRPSDDPVAVATSLRIRTDMARNDAYTKNADYAKSW 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQ---SEITQLQSQLRDIARGSSFNG 130
+DI + +++ D++ + G +Q +EI QL++Q+ +
Sbjct: 73 LDITDSALNQLGDLLQRTRELAVQGANGTLTQADMQKMANEIEQLKAQMIQVGNTQYNGR 132
Query: 131 ENWLRTDLGSSTASIAKSVIGSFI 154
+ + S +
Sbjct: 133 YIFAGFKTTTQPFSEDNNSYNGDN 156
Score = 50.1 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 56/183 (30%)
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + +A A + + G TT +
Sbjct: 88 QRTRELAVQGANGTLTQADMQKMANEIEQLKAQMIQVGNTQYNGRYIFAGFKTTTQPFSE 147
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
D N + + + +G S + + + + +
Sbjct: 148 DNNSYNGDNGLIEFEVGAGGNKIAVNVPGDKVFDVDLTGTSQLLVMMDNLKSALDSGDHQ 207
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A+ ++ +D Q++ A ++G+ S+RI L ++ ++ + + DAD+A
Sbjct: 208 AVSNLIVDVDKQMENVLAVRAEVGAKSNRIDLIQNRLQDDNYNFTALLSKSEDADLAQVI 267
Query: 420 TRL 422
T L
Sbjct: 268 TNL 270
>gi|254475138|ref|ZP_05088524.1| flagellin domain protein [Ruegeria sp. R11]
gi|214029381|gb|EEB70216.1| flagellin domain protein [Ruegeria sp. R11]
Length = 270
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/207 (22%), Positives = 89/207 (42%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ +N +L Q ++S+G R+ A DNAA W+I++ M SD
Sbjct: 1 MSSILTNNGAMVALQTLKSVNMDLNDTQSQISTGKRIGSAKDNAAVWAISKTMDSDIAGY 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
++V +++G+G + V +A +G + ++ ++ +K + D IQ + + +Q+
Sbjct: 61 NSVQESLGVGEATVAVALSGAEQIVETLTEMKQLAISANSENVDHAKIQDSLAKKAAQIE 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FNG N L + + + + +D + ++
Sbjct: 121 SIIDSAEFNGANLLDAATTTQLTVLGGLDPSADTITVTSINSASNLDTSGITAITDVATA 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDID 207
+ + N
Sbjct: 181 STALTEIETMLGNAIDASAQLGADSNR 207
Score = 77.5 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 66/120 (55%)
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ + S+ + + + A + ++ I+T + A A+ ++G+ S+R+
Sbjct: 151 SADTITVTSINSASNLDTSGITAITDVATASTALTEIETMLGNAIDASAQLGADSNRLSD 210
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
Q F+ + D+++ GV + D +M S RL ALQTQQQLAVQ+LSI N + ++SLFR
Sbjct: 211 QSKFVSKLNDSLKMGVSTMTDTNMEESSARLKALQTQQQLAVQSLSIANQAPQTLMSLFR 270
>gi|87242446|gb|ABD33762.1| flagellin [Bacillus thuringiensis serovar sylvestriensis]
Length = 233
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/222 (14%), Positives = 73/222 (32%), Gaps = 3/222 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ +R+SSG ++ AAD+AA +IA M++ G L+ + S + + +
Sbjct: 1 DKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVGARNTQDAMSALRTTDSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ T D S+ E +L ++ IA ++FNG++ L
Sbjct: 61 NSISNILLRMRDIATQSANGTNDTKDQASLDLEFQELHKEIDHIAEKTNFNGKSLLAGTG 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
++ + + T T + + +
Sbjct: 121 ADIDIQLSDVSGDKLTITSISAKAADLLTVAASDVKTPAAAGTAITNLDKAIQKVADNRA 180
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + ST A+ A +
Sbjct: 181 TFGSQLNRLDHNLNNVNSQSTNMAAAASQIEDADMAKEMSNM 222
Score = 73.6 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 15/190 (7%), Positives = 45/190 (23%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + +A + D + + +
Sbjct: 44 RNTQDAMSALRTTDSALNSISNILLRMRDIATQSANGTNDTKDQASLDLEFQELHKEIDH 103
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
G + + ++ A
Sbjct: 104 IAEKTNFNGKSLLAGTGADIDIQLSDVSGDKLTITSISAKAADLLTVAASDVKTPAAAGT 163
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ +D I+ GS +R+ + + + ++ DADMA E + ++
Sbjct: 164 AITNLDKAIQKVADNRATFGSQLNRLDHNLNNVNSQSTNMAAAASQIEDADMAKEMSNMT 223
Query: 424 ALQTQQQLAV 433
+ + +
Sbjct: 224 KFKILNEAGI 233
>gi|315125993|ref|YP_004067996.1| lateral flagellin LafA [Pseudoalteromonas sp. SM9913]
gi|315014507|gb|ADT67845.1| lateral flagellin LafA [Pseudoalteromonas sp. SM9913]
Length = 279
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 76/221 (34%), Gaps = 3/221 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI +N ++MS +L N +L +R+ SG +++ A D+AA IA + +
Sbjct: 3 LSIQSNMASMSIQNQLGRSNNDLSTALERLGSGFKINSAKDDAAGLQIASRLNAQVRGQD 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
A S + A+ + ++ +K T + + +E T L ++
Sbjct: 63 AGLYNGNNAMSMMQTAEGAFDEMTNIAYRMKELATQGSSDTNGAKEWAAQSAEYTALATE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L +I +SF L G A +GS + T +
Sbjct: 123 LTNIMDNTSFGDGTKLLAATGKFGAGAVNFQVGSSAAETLNVDISTQLGAVTTAIGSAAA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
+ T + + + + + S+ T++
Sbjct: 183 FTDVATAQAQIAFVDTLVGEIGTARSTLGASMNRLDHTMTN 223
Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/214 (14%), Positives = 64/214 (29%)
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ S + S + T+ +
Sbjct: 66 YNGNNAMSMMQTAEGAFDEMTNIAYRMKELATQGSSDTNGAKEWAAQSAEYTALATELTN 125
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
D + T + + + T + A+ +
Sbjct: 126 IMDNTSFGDGTKLLAATGKFGAGAVNFQVGSSAAETLNVDISTQLGAVTTAIGSAAAFTD 185
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++F+DT + A +G+ +R+ + M+ + VG L+DAD A+
Sbjct: 186 VATAQAQIAFVDTLVGEIGTARSTLGASMNRLDHTMTNVSNMKQNTQAAVGTLMDADFAA 245
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E++ ++ Q + LS N++T I SL R
Sbjct: 246 ETSNMTKQQLLMNSGISVLSTANSTTQMIGSLLR 279
>gi|325295474|ref|YP_004281988.1| flagellin domain protein [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065922|gb|ADY73929.1| flagellin domain protein [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 286
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 72/201 (35%), Gaps = 3/201 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N+ + L N+ +R+++G R++ AAD+AA IA +K+ +L
Sbjct: 5 INYNYQSDFTHFNLLQTEANMNKSLERLATGYRINRAADDAAGLYIADQLKTYAVSLEQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ G S IA++ ++ ++++ IK K D + IQ +I +L +
Sbjct: 65 TRNAHDGISIAQIAQSALTNVYNILNDIKAKAIEAANDSQDSATRQIIQQDINKLVDVIG 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FNG N + + G + P T+ L ++
Sbjct: 125 KIFTDTEFNGINVFSSGTAVTFTIHYGGRSGQELLMQGATASAAAAADTSAPSTITLGNT 184
Query: 181 TDGTERYGLLDRNHKIKVEPQ 201
+ I
Sbjct: 185 GYTLDVTSQTKAEATISTVDA 205
Score = 77.9 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 30/94 (31%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
T + E +S +D IK K GS + + R ++
Sbjct: 182 GNTGYTLDVTSQTKAEATISTVDALIKEVDKLNAKYGSYQIELEKLITNNESQRINSQEA 241
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
R+ + D A E + + Q Q L+ N
Sbjct: 242 ESRIRNVDFAKEMSEFTRNQILMQSGTAMLAQAN 275
>gi|54609830|gb|AAV35032.1| FlaA [Campylobacter jejuni]
Length = 531
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 65/179 (36%), Gaps = 3/179 (1%)
Query: 33 SGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIK 92
SGLR++ AAD+A+ +IA ++S L + A M + + ++ TIK
Sbjct: 1 SGLRINSAADDASGMAIADSLRSQASTLGQAISNGNDALGILQTADKAMDEQLKILDTIK 60
Query: 93 NKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSV 149
K T + G +Q++I +L +L +IA +SFNG+ L + + I S
Sbjct: 61 TKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNFINQEFQIGASS 120
Query: 150 IGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + + +S + + ++
Sbjct: 121 NQTVKTTIGATQSSKIGLTRFETGGRISESGEVQFTLKNYYGIDDFKFPKVEISTSAGT 179
Score = 80.2 bits (195), Expect = 7e-13, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 31/83 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ ++I + I + + V+ ++ D D
Sbjct: 447 VTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQITSTINNITVTQVNVKSAESQIRDVD 506
Query: 415 MASESTRLSALQTQQQLAVQALS 437
A+ES S Q A++
Sbjct: 507 FAAESANYSKANILAQSGSYAMA 529
>gi|5327288|emb|CAB46359.1| flagellin [Xenorhabdus nematophila]
Length = 81
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 33/81 (40%)
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ +G++ +R+ + + + + R+ DAD A E + +S Q QQ
Sbjct: 1 ALAQVDDMRSSLGAVQNRLESTVNNLNNTVNNLSAARSRIEDADYAVEVSNMSRGQILQQ 60
Query: 431 LAVQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 61 AGTSVLAQANQVPQTVLSLLR 81
>gi|222147578|ref|YP_002548535.1| flagella associated protein [Agrobacterium vitis S4]
gi|221734566|gb|ACM35529.1| flagella associated protein [Agrobacterium vitis S4]
Length = 320
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 67/319 (21%), Positives = 111/319 (34%), Gaps = 2/319 (0%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ + S S +++ + + D ++T ++ +
Sbjct: 4 IMTNNSAISALSTLRTISSQMETTQSAISSGYKVKDASDNAAYWSIATTMRSDNKAMSAV 63
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ V + A G +S K KL + + + +
Sbjct: 64 QDALGVGAAKTDTAYTGMEAAIGVVSDIKAKLVAAREPGVDKDKINKELTELKNQLSSVA 123
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+A + + + GN T T+ +
Sbjct: 124 KSASFNGENWLYDNSDSTGTTQEMVGSFVRGNDGNVSIKTITFDTTNSILINDEAGDGGL 183
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
T V T + + + + ++ MV+ +D +
Sbjct: 184 LTKGTVATYAYGTTT--TTASYYLISSVAGNTSSASEVTLTSSTTDDEIDGMVASVDKML 241
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
T AA IG+ SRI Q F K + D ++ G+G+LVDADM EST+L ALQTQQQL
Sbjct: 242 SSMTDAAATIGATKSRIESQSSFAKDLSDTIDVGIGKLVDADMNEESTKLKALQTQQQLG 301
Query: 433 VQALSIVNNSTARILSLFR 451
+QALSI N+ST +LSLFR
Sbjct: 302 IQALSIANSSTENVLSLFR 320
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 74/144 (51%), Positives = 100/144 (69%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI+TN+SA+SA LR I+ +E Q +SSG +V DA+DNAAYWSIA M+SDN A+
Sbjct: 1 MTSIMTNNSAISALSTLRTISSQMETTQSAISSGYKVKDASDNAAYWSIATTMRSDNKAM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV DA+G+G++K D A GM AI V+S IK K+ A E G D I E+T+L++QL
Sbjct: 61 SAVQDALGVGAAKTDTAYTGMEAAIGVVSDIKAKLVAAREPGVDKDKINKELTELKNQLS 120
Query: 121 DIARGSSFNGENWLRTDLGSSTAS 144
+A+ +SFNGENWL + S+ +
Sbjct: 121 SVAKSASFNGENWLYDNSDSTGTT 144
>gi|117919779|ref|YP_868971.1| flagellar hook-associated protein FlgL [Shewanella sp. ANA-3]
gi|117612111|gb|ABK47565.1| flagellar hook-associated protein 3 [Shewanella sp. ANA-3]
Length = 403
Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/436 (10%), Positives = 108/436 (24%), Gaps = 53/436 (12%)
Query: 8 HSAMSASQKLRDI---NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
SA +Q + + + +++SSG +V+ A D+ + N +
Sbjct: 4 SSAQIFNQSITSVLQKQTATSKILEQLSSGKKVNTAGDDPVAALGIDNLNQRNALVDQFM 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLRD 121
I ++++ + ++ + A ++ S+I+ + G ++ + I E+ +L
Sbjct: 64 KNIDYATNRLAVTESKLGSAENLASSIREQVMRAVNGTLADSERQMIADEMKGSLEELLS 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA +G + I ++ + T
Sbjct: 124 IANSKDESGNYMFSGYSTDKEPFAFDNSTPPKIVYSGDSGIRNSLVQSGVALGTNVPGDT 183
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ L + Q + + A S N
Sbjct: 184 AFMKAPNGLGDYSVNYLASQQGEFSVKTAKIADPATYLADTYTFNFSDNGSGGTNLQVLD 243
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A +
Sbjct: 244 SANNPVANIANFDAATPVSFNG-------------------------------------- 265
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ + + I S I + + + +
Sbjct: 266 ---------IEVNISGKPSAGDSFTMEPQSEVSIFDTISRAIALIEDPNSANTPQGRSQL 316
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++++ ID+ + ++A G+ + +D + + L D D AS T
Sbjct: 317 AQILNDIDSGVNQISSARSVAGNNLKAVESYKDTHIEEQVLNTSALSLLEDLDYASAITE 376
Query: 422 LSALQTQQQLAVQALS 437
+ Q S
Sbjct: 377 FAKQQLALNAVSSVFS 392
>gi|114569807|ref|YP_756487.1| flagellin domain-containing protein [Maricaulis maris MCS10]
gi|114340269|gb|ABI65549.1| flagellin domain protein [Maricaulis maris MCS10]
Length = 274
Score = 92.1 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +I TN AM A Q L N +LE VQ R+++GL V A DN ++IAQ M++D +
Sbjct: 1 MATINTNAGAMVALQSLNRTNRDLETVQARINTGLAVGSAKDNGGVYAIAQSMRADVRSY 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQS 117
AV+ ++ L +S VD+A AG D + +K K A + D ++ + L+
Sbjct: 61 VAVAQSLDLSASTVDVALAGGEAISDTLVEMKEKALAASDTSLDQASRDALNEDFKALRD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGS 140
Q+ I + FNG N +
Sbjct: 121 QVGKIVETAEFNGTNLIDGSKSQ 143
Score = 76.7 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 57/97 (58%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +V+ I+T + + ++G+ S + + + FI + DA+E G+G LVDAD
Sbjct: 178 FASAGEASTLVATIETSLNNLNGSLARLGTGSKSLGVHKAFIGKLSDALETGIGNLVDAD 237
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+A ES L +LQ +QQL VQALSI N + + +L FR
Sbjct: 238 LAKESAHLQSLQVKQQLGVQALSIANATPSTVLGYFR 274
>gi|117923380|ref|YP_863997.1| flagellin domain-containing protein [Magnetococcus sp. MC-1]
gi|117607136|gb|ABK42591.1| flagellin domain protein [Magnetococcus sp. MC-1]
Length = 256
Score = 92.1 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/220 (12%), Positives = 67/220 (30%), Gaps = 3/220 (1%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDI 76
L + L+ +R++SG R++ AAD+A+ +I + + S G S + +
Sbjct: 2 LTRASNGLQTHYERLASGRRINSAADDASGLAITSRTTAQVRGFNQASRNANDGISFLQV 61
Query: 77 AKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLRDIARGSSFNGENW 133
A + + ++ ++ + ++Q +++L ++++ I +N
Sbjct: 62 ADGALEETHAMLQQLRELAVESANGSYNALDRGNMQQVVSELTAEIQRIGSERKYNDHVM 121
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
L + T I + L T + T L +
Sbjct: 122 LDGTFANQTFQIGAFSSENITVTIASATASALGVEDLSFSTQAKAEAALATLDSALDAVS 181
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233
V ++ + + +
Sbjct: 182 DIRLDLGAVQNRFMSAMGNLGSMSMHTSAMQSQMMDTDMA 221
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 39/96 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ + E ++ +D+ + + +G++ +R + M +++D D
Sbjct: 160 FSTQAKAEAALATLDSALDAVSDIRLDLGAVQNRFMSAMGNLGSMSMHTSAMQSQMMDTD 219
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA+E+ L+ QQ V LS N L L
Sbjct: 220 MAAETALLTRSSVIQQAGVAMLSQANQRPQLALQLL 255
>gi|146307862|ref|YP_001188327.1| flagellar hook-associated protein FlgL [Pseudomonas mendocina ymp]
gi|145576063|gb|ABP85595.1| flagellar hook-associated protein 3 [Pseudomonas mendocina ymp]
Length = 562
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 64/198 (32%), Gaps = 7/198 (3%)
Query: 8 HSAMSASQK----LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
S++ A L NL Q+++SSG R+ AD+ ++ L
Sbjct: 5 ISSIQAFNNGVSGLGRNYSNLIRTQEQISSGNRILTPADDPVASVRLLQLEQQQAVLKQY 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
SD + + + + ++ + VM ++ D SI E+++ +++L
Sbjct: 65 SDNLTAAKNSLTQEETTLNSVVTVMQRVRELAVRAGGGSLSAEDRNSIAKELSEREAELL 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++ + GE +LG + + D G+ +
Sbjct: 125 NLMNSRNARGEYLFAGNLGKTEPFVRNPDGTYSYFGDEGQRTLQVASSTNVAINDNGKRL 184
Query: 181 TDGTERYGLLDRNHKIKV 198
+ + + +
Sbjct: 185 FESVTNANRVANANGVNN 202
Score = 46.3 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 18/171 (10%), Positives = 43/171 (25%)
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL 325
+ + A + + + T S Y + D
Sbjct: 379 RFTDDSNYEVFAQPVGPNSPVLTTGTVTGPYPASFTVYGAEFTLSGPASAGGGDQFGVQP 438
Query: 326 DSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
++ L + + + + + +D + +IG+
Sbjct: 439 QFQEQRSILNTISRLRQALESSPTSPAGNLAVRNEVAIALKNLDNGMGSVLEVQTEIGAR 498
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
+ I + + + L + D A +RLS + A Q+
Sbjct: 499 LNLIETTGIDNEDVTLVNKSVQAELRELDYAEALSRLSFQTIILEAAQQSY 549
>gi|149201616|ref|ZP_01878590.1| flagellar hook-associated protein 3 FlgL [Roseovarius sp. TM1035]
gi|149144664|gb|EDM32693.1| flagellar hook-associated protein 3 FlgL [Roseovarius sp. TM1035]
Length = 412
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 56/444 (12%), Positives = 123/444 (27%), Gaps = 42/444 (9%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI T+ ++ L +N + +Q ++SSG+ + + K AL
Sbjct: 2 SIGTSFFHNVTTRNLSQVNERISDLQGQISSGVNDPRPSADPVRALRLSAAKEQQEALDR 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQL 119
S+ + +++D A +S+A +VM + + T+ SI +E+ L+ L
Sbjct: 62 YSNNLERAGARLDQADTVLSEAGNVMRRVGELALRAASDTATATERDSIGTEVRALRDSL 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A +G S + D + L
Sbjct: 122 LGLANARDESGRALFGGYGTQSDPFRDGPGGVVYQGDGGQSRLQVSESLSLPTGLSGDAV 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G+E + + +G + + +
Sbjct: 182 FAIGSEGGDVFAVIDDFLASLGTASSAPRASVTGAGQLDLDLTLSRAPAAWSMTLEGPLG 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A A N + +G + + + D+
Sbjct: 242 STTIPFVAAEGAMSGAVEAINAQTAATGISAALDPETGGLMLTAQGDV------------ 289
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
++ + D+G ++
Sbjct: 290 ---------------------------KVSNIARAPDAGGVLMVARDAEGGTQALVPFAR 322
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ + + ++G++S+ Q D I + A+ + V L D D+A+
Sbjct: 323 TRDAVIDRLRGASEHLIDQRTQLGALSADAARQSDVIDNRKLAMSQAVSGLEDLDLANAL 382
Query: 420 TRLSALQTQQQLAVQALSIVNNST 443
TRL + QA + +
Sbjct: 383 TRLQQSMLTRDATQQAYVRITQQS 406
>gi|256750926|ref|ZP_05491810.1| flagellar hook-associated protein 3 [Thermoanaerobacter ethanolicus
CCSD1]
gi|256750261|gb|EEU63281.1| flagellar hook-associated protein 3 [Thermoanaerobacter ethanolicus
CCSD1]
Length = 297
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 52/144 (36%), Gaps = 3/144 (2%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ L+ Q+ +S+G ++S +D+ + + +++D A + S
Sbjct: 13 LNNYHNNLEKLQKNQNMLSTGKKISRPSDDPVAVATSLRIRTDMARNDAYTKNADYAKSW 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQ---SEITQLQSQLRDIARGSSFNG 130
+DI + +++ D++ + G +Q +EI QL++Q+ +
Sbjct: 73 LDITDSALNQLGDLLQRTRELAVQGANGTLTQADMQKMANEIEQLKAQMIQVGNTQYNGR 132
Query: 131 ENWLRTDLGSSTASIAKSVIGSFI 154
+ + S +
Sbjct: 133 YIFAGFKTTTQPFSEDNNSYNGDN 156
Score = 50.5 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/196 (12%), Positives = 60/196 (30%)
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + +A A + + G TT +
Sbjct: 88 QRTRELAVQGANGTLTQADMQKMANEIEQLKAQMIQVGNTQYNGRYIFAGFKTTTQPFSE 147
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
D N + + + +G S + + + + +
Sbjct: 148 DNNSYNGDNGLIEFEVGAGGNKIAVNVPGDKVFDVDLTGTSQLLVMMDNLKSALDSGDHQ 207
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A+ ++ +D Q++ A ++G+ S+RI L ++ ++ + + D D+A
Sbjct: 208 AVSNLIVDVDKQMENVLAVRAEVGAKSNRIDLIQNRLQDDNYNFTALLSKNEDVDLAQVI 267
Query: 420 TRLSALQTQQQLAVQA 435
T L + + ++ A
Sbjct: 268 TNLQMDENVYRASLAA 283
>gi|239907785|ref|YP_002954526.1| flagellar hook-associated protein 3 [Desulfovibrio magneticus RS-1]
gi|239797651|dbj|BAH76640.1| flagellar hook-associated protein 3 [Desulfovibrio magneticus RS-1]
Length = 509
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/477 (9%), Positives = 113/477 (23%), Gaps = 63/477 (13%)
Query: 18 RDINYNLEVVQD---RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
R N L + + + S+ R++ +D+ ++ + D L+ I +
Sbjct: 16 RQNNAALSRLMETNLQSSTQKRINAPSDDPNGAALVLQTRCDISQLTQYKRNITSAEGWL 75
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGS----- 126
+ + ++ ++++IK G + I S + Q QL +A
Sbjct: 76 TQSDSALTSVSTLITSIKGYAEQGATGSVTEENRGEIASAVRQYFQQLISLANTEYSGQS 135
Query: 127 ---------SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
E + + + G F + + D
Sbjct: 136 LFAGQKVDTEAFSEALWMNSNDETFNAAVAASNGGFTLTGSSNSTLLVQFMGTDTAGHQP 195
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
S ++ + V +
Sbjct: 196 AFSYSADGGTTWTTGSYNTATTDDPQELNLGGVTMTLDNDALDTVTACADHEDENGTWMW 255
Query: 238 -------------------------------------------TFDQAKGIATIPVPLPA 254
D + A
Sbjct: 256 IRPTAVYNGNTNDGVTVIDATNSGATASAAGVFSGNVAVRLDEDCDFSAPFAYSYSTDGG 315
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
TSGT + S+ + + ++ V + S + + T
Sbjct: 316 RSWVSGNTSGTPSGTTVSLPVPGGSLTLDSAGTVVSGSQFFIQPSTADISVAISPTDSVT 375
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
V + S + + + + N + +E + + +
Sbjct: 376 VNGVGKDIFGGVYNGQAVTFEGSVDANLFETVGKLVGYLETNNQQGCQEALDQLTASQEQ 435
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
A +G+ +R+ + + + + + DAD+ T+L+ + Q
Sbjct: 436 VLTVAASVGARENRVTAAGVMVDTLAENAGDTLSKTEDADLTELITKLAQQELAYQA 492
>gi|114570509|ref|YP_757189.1| flagellin domain-containing protein [Maricaulis maris MCS10]
gi|114340971|gb|ABI66251.1| flagellin domain protein [Maricaulis maris MCS10]
Length = 277
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 3/175 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN AM A Q L N ++ VQ+R+++GL++S A DNAA +++AQ M++D AL A
Sbjct: 4 SVHTNTGAMIALQNLNKTNDDMLGVQNRINTGLKISGAKDNAAIYAVAQGMRADIRALEA 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
V + S+ D+A A D++ ++ K TA ++ + S+ L Q+
Sbjct: 64 VQSGLDRASTIGDVALAAGESISDLLVQMREKATAAMDPSLDAFSRAAYDSDFKALLDQI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
I + + F+G N L + + +A + + + I +
Sbjct: 124 SGILQNAEFDGANILDGSITNGIEFLADADAARSVTLKAQDMSIGGAILTIAATA 178
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/90 (42%), Positives = 55/90 (61%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
V+ I T ++ A +GS + ++ +F+ + D++ +GVG LVDAD+A ES +L
Sbjct: 188 NAVTAIKTSLENVNQALANLGSDTKKLEAHSNFVGKLMDSLTRGVGDLVDADLAVESAKL 247
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFRG 452
ALQ +QQL VQALSI N IL+LF G
Sbjct: 248 QALQVKQQLGVQALSIANGQPQIILNLFGG 277
>gi|120598239|ref|YP_962813.1| flagellar hook-associated protein FlgL [Shewanella sp. W3-18-1]
gi|120558332|gb|ABM24259.1| flagellar hook-associated protein 3 [Shewanella sp. W3-18-1]
Length = 403
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/436 (10%), Positives = 109/436 (25%), Gaps = 53/436 (12%)
Query: 8 HSAMSASQKLRDI---NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
SA +Q + + + +++SSG +V+ A D+ + N +
Sbjct: 4 SSAQIFNQSITSVLQKQTATSKILEQLSSGKKVNTAGDDPVAALGIDNLNQRNALVDQFM 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLRD 121
I ++++ + ++ + A ++ S+I+ + G ++ + I E+ +L
Sbjct: 64 KNIDYATNRLAVTESKLGSAENLASSIREQVMRAVNGTLADSERQMIADEMKGSLEELLS 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA +G + I ++ + T
Sbjct: 124 IANSKDESGNYMFSGYSTDKEPFAFDNSTPPQIVYSGDSGVRNSLVQTGVALGTNVPGDT 183
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ L + Q + + A + + + N
Sbjct: 184 AFMKAPNGLGDYSVNYLASQQGEFSVKAAKIADTSTYLADTYTFNFTDNGVGGTNLQVLD 243
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ V A +
Sbjct: 244 SANNPVANVTNFDATTPVSFNG-------------------------------------- 265
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ + + I S I + + + +
Sbjct: 266 ---------IEVKVSGKPSAGDSFTMEPQAEVSIFDTISSAIALIEDPNSANTPQGRAQL 316
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++++ ID+ + ++A G+ + +D + + L D D AS T
Sbjct: 317 AQILNDIDSGVNQISSARSVAGNNLKAVESYKDTHIEEQVLNTSALSLLEDLDYASAITE 376
Query: 422 LSALQTQQQLAVQALS 437
Q S
Sbjct: 377 FEKQQLALNAVSSVFS 392
>gi|229916659|ref|YP_002885305.1| flagellar hook-associated protein 3 [Exiguobacterium sp. AT1b]
gi|229468088|gb|ACQ69860.1| flagellar hook-associated protein 3 [Exiguobacterium sp. AT1b]
Length = 310
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 52/140 (37%), Gaps = 3/140 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
+ + L L VQ+++ SG R+ A+++ +++ + +
Sbjct: 10 QTNLKHLSSSYNTLARVQEQLISGKRIQKASEDPVVAMQGIRYRTEVREVDQFRRNVSEA 69
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSS 127
+S +D+ + +++ + + I+ T + I+SE+ QL + +A +
Sbjct: 70 TSWMDLTDSTLNEVTEAVKRIRELTTQAANDTYESSQREIIKSEVDQLIEHIGSLANSKA 129
Query: 128 FNGENWLRTDLGSSTASIAK 147
+ T ++
Sbjct: 130 GEKYIYNGTKTDQPLINVDN 149
Score = 47.4 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 32/81 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +DT + ++G+ ++R+ L ++ ++ + + D D
Sbjct: 216 TTTGADLSAELDTLDTLGQNLITERAELGARANRLELVDNRLQDHEIIAKTIMSDNEDID 275
Query: 415 MASESTRLSALQTQQQLAVQA 435
+ L + +T + A+ A
Sbjct: 276 VEKVIMELKSHETVHRAALSA 296
>gi|56421671|ref|YP_148989.1| flagellar hook-associated protein FlgL [Geobacillus kaustophilus
HTA426]
gi|56381513|dbj|BAD77421.1| flagellar hook-associated protein 3 [Geobacillus kaustophilus
HTA426]
Length = 297
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/210 (11%), Positives = 62/210 (29%), Gaps = 3/210 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + A + +++ L+ Q ++S+G +++ +D+ +S+ +
Sbjct: 3 ITQSMLANNMLKQITRSYEKLDQYQTQLSTGKKITRPSDDPVVAMKGIAYRSNLAEVEQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ V+ + + + KA + I+ + +SI E+ QL L
Sbjct: 63 KRNFSEAYNWVENSDSALDKATQALQRIRELVVQASNDTYEETQRQSIAKEVRQLTEHLV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + + ++ S + Y+ +
Sbjct: 123 TIANTKVGDKYIFNGAKTTEPPVTVNPDGTISVSTNSQQLNIELAKGIYIPVNIPPSTAF 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
G+ + L P +
Sbjct: 183 GAGSGLFSDLQNLAASLENPSTTGNDLTGY 212
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 32/83 (38%)
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
+ + + +D+ + ++G+ +RI L ED I + EK + D
Sbjct: 201 NPSTTGNDLTGYLDKLDSHLTNLLGVRAELGARMNRIELMEDRIDSQQVIAEKMLSDNED 260
Query: 413 ADMASESTRLSALQTQQQLAVQA 435
D+ T L ++ + A+
Sbjct: 261 VDLEKVITDLKTQESVHRAALAV 283
>gi|163750561|ref|ZP_02157799.1| putative flagellin (fliC-like) protein [Shewanella benthica KT99]
gi|161329716|gb|EDQ00705.1| putative flagellin (fliC-like) protein [Shewanella benthica KT99]
Length = 104
Score = 92.1 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 41/97 (42%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M A L NL +R++SG+R++ A D+AA I+ M S + G
Sbjct: 1 MKAQSTLNRAQSNLSTSMERLASGMRINSAKDDAAGLQISNRMTSQINGIGVAMRNANDG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKS 107
S A+ M ++ +++ +++ S++
Sbjct: 61 ISIAQTAEGAMGESTNILQRMRDLSLQSANGSNSSET 97
>gi|51597626|ref|YP_071817.1| flagellin [Yersinia pseudotuberculosis IP 32953]
gi|186896759|ref|YP_001873871.1| flagellin domain-containing protein [Yersinia pseudotuberculosis
PB1/+]
gi|51590908|emb|CAH22564.1| Putative flagellin [Yersinia pseudotuberculosis IP 32953]
gi|186699785|gb|ACC90414.1| flagellin domain protein [Yersinia pseudotuberculosis PB1/+]
Length = 400
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 3/143 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN SA +A L + R+S+G R++ ADNAA I M+
Sbjct: 3 LSIHTNASAKTAINSLSNAGLANAKSSQRLSTGFRINSPADNAAGLQITNRMEKFLNGAG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
I + + IA G+++++ ++ +K T D ++IQ E T+L +
Sbjct: 63 QAKQNIQESIAMLQIADGGLAESVKTLNAMKKLATQAANDTNSAADREAIQKEFTELGKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSS 141
L++ + +N E
Sbjct: 123 LQNALNNTEYNSEKLFADGGKMR 145
Score = 77.9 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 36/103 (34%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
+K + I A +G+ +R+ + + M + +G
Sbjct: 298 VMNMQLLDKDLAMMADKKLSDVIDAYGAFRATLGANQNRLQSSSNNLDNMISNTAQALGS 357
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ D D A E + + Q +V L N +T I +L +G
Sbjct: 358 IKDTDFADEMKNHAQSEMLMQSSVMMLKKANAATQLISTLLQG 400
>gi|87242388|gb|ABD33733.1| flagellin [Bacillus thuringiensis serovar tohokuensis]
Length = 251
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ +R+SSG ++ AAD+AA +IA M++ G L+ + S + + +
Sbjct: 1 DKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVGARNTQDAMSALRTTDSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ T G D S+ E LQ ++ IA ++FNG++ L
Sbjct: 61 NSISNILLRMRDLATQSANGTNGGKDQDSLNLEFKALQEEIDHIAGKTNFNGKSLLAEAG 120
Query: 139 GSSTASI 145
SI
Sbjct: 121 TDKNISI 127
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 27/76 (35%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ +D I+ GS +R+ + + + ++ DADMA
Sbjct: 176 DNDAAGAIVQLDKAIQTVADMRATFGSQLNRLDHNLNNVNSQATNMSAAASQIEDADMAK 235
Query: 418 ESTRLSALQTQQQLAV 433
E + ++ + + +
Sbjct: 236 EMSEMTKFKILNEAGI 251
>gi|46200756|ref|ZP_00056435.2| COG1344: Flagellin and related hook-associated proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 521
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 74/521 (14%), Positives = 150/521 (28%), Gaps = 70/521 (13%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ + + S L+ + Q R+S+GL+V+ A D+ + ++ +
Sbjct: 1 MSDVTLTSAVRSNLLALQSTQGLVNRTQSRLSTGLKVASAIDDPVAYFQSKALSDRASDF 60
Query: 61 SAVSDAIGLGSSK----------------------VDIAKAGMSKAIDVMSTIKNKITAG 98
D I G S ++ A S+ ++ +
Sbjct: 61 QGKKDNIDQGVSSLSTALQGISGVSTLVKQLKGLALNAQSASSSQIGSLVQQFNALRSQL 120
Query: 99 VERGTDSKSIQSEITQLQSQLRDIARGS--------------------SFNGENWLRTDL 138
DS+ + + Q ++ + + +
Sbjct: 121 DNLALDSQYQGQNLVAGKGQTLTVSFSNLTGSTLEVTSVDVRVGATGLNISKAVTSNGGF 180
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ + +GS I TT+ + + + G L N
Sbjct: 181 QLNFQDASSVDLGSGIVRTTYAGTATTLTSGTYTFSYGSATLSFTVYSQGSLTENGSDYE 240
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
+ A + + ++ + G + + A +
Sbjct: 241 AFTTSTAVANGDNFAFRVGTETNGDTYNVTAGSIQNGTRFAVEYAGSTSGGISASALASG 300
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
N T G +G S+A+ + + + + T++ T
Sbjct: 301 SNLTIGFNGLTGSSLASGTYTFSYAGEALTFTVGSAGNTGTTFTTTDTFTNGSALTATLT 360
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM-------------- 364
T ++ +G R + +
Sbjct: 361 IGAVGTAGTQSAGAIGNSTGMISNASGKVRGQAYASGGDLTVAYGAQISARTTVSNVSGQ 420
Query: 365 --------------VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
V+ +D ++ + A +G+ + ++ + DF K D ++ G G+L
Sbjct: 421 YVLDSKLTGVVQGLVTKLDENLQTLRSHAQNLGTNVALLNTRLDFTKNYVDLLQAGSGKL 480
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
AD+ E L ALQT+QQL +QALS + ILSLFR
Sbjct: 481 TLADLNEEGANLLALQTRQQLGIQALSFAGQNEKSILSLFR 521
>gi|87242408|gb|ABD33743.1| flagellin [Bacillus thuringiensis serovar amagiensis]
Length = 242
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ +R+SSG ++ AAD+AA +IA M++ G L+ + S + A +
Sbjct: 1 DKMNTAMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVGARNTQDAMSALRTGDAAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+++ +++ T TDS S+ E QL ++ IA ++FNG +L
Sbjct: 61 GSISNILLRMRDLATQAASGTNNTTDSASLDKEYKQLAEEIDHIAGKTNFNGNAFLDAAG 120
Query: 139 GSSTASI 145
G +I
Sbjct: 121 GGKKITI 127
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 27/69 (39%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ ID I+ GS +R+ + + + ++ DADMA E + ++
Sbjct: 174 MKAIDKAIQNVADMRATFGSQLNRLDHNLNNVTSQATNMAAAASQIEDADMAKEMSEMTK 233
Query: 425 LQTQQQLAV 433
+ + +
Sbjct: 234 FKILNEAGI 242
>gi|289666056|ref|ZP_06487637.1| flagellar hook-associated protein FlgL [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289670518|ref|ZP_06491593.1| flagellar hook-associated protein FlgL [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 401
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 56/443 (12%), Positives = 117/443 (26%), Gaps = 55/443 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ + + L ++ ++SSG R+ A D+ A + A++
Sbjct: 5 ISTSMMYSQSVASMGAKQARLNQIESQLSSGQRLVTAKDDPVAAGTAVGLDRALAAITRF 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ +++ + + +S+A D M+ + D K+I SE+T L+ +
Sbjct: 65 GENANNVQNRLGLQENALSQAGDKMARVTELAVQANNSSLSPDDRKAIASELTALRDSML 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G S I S ++ D K D ++ +
Sbjct: 125 SLANSTDGTGRYLFGGTADGSAPFIKSSGNVTYNGDQTQKQVEVAPDTFVSDTLPGSEIF 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G +D + L + T + + +
Sbjct: 185 MRIRTGDGTVDAHANAANTGTGLLLDFSRDASTGTWNGSSYSVQFTAADTYEVRDSTNAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ G + AA + + S + AS T D
Sbjct: 245 VSTGTYKEGQDIKAAGVRMRISGAPAVGDSFQIGASGTKDVFSTIDD------------- 291
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ LN +
Sbjct: 292 ---------------------------------------MVSALNSDTLTAPQKASMTNT 312
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ + I A G+ S I ++ ++ + + D D AS
Sbjct: 313 LQSSMRDIAQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTTLSSIRDLDYASAIG 372
Query: 421 RLSALQTQQQLAVQALSIVNNST 443
+ + Q A + +S+
Sbjct: 373 QYQLEKASLQAAQTIFQQMQSSS 395
>gi|114570512|ref|YP_757192.1| flagellin domain-containing protein [Maricaulis maris MCS10]
gi|114340974|gb|ABI66254.1| flagellin domain protein [Maricaulis maris MCS10]
Length = 275
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN AM A Q L N ++ VQ+R+++GL V+ A DN ++IAQ M+S
Sbjct: 3 LSVNTNAGAMIALQNLNKTNMDMNEVQNRINTGLEVASAKDNGGVYAIAQRMRSQVNGYG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQ 118
V ++ L +S D+A A D++ +K K A + D ++ + L+ Q
Sbjct: 63 VVEQSLNLAASVTDVALAAGEAISDILIEMKEKALAASDSSLDAASRTALNEDFKALRDQ 122
Query: 119 LRDIARGSSFNGENWLRTDLG 139
+ I + FNG N + +
Sbjct: 123 IATITSNAEFNGTNLINGTVT 143
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/203 (24%), Positives = 83/203 (40%)
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
V A A + K ++AAS + + + +N+
Sbjct: 72 ASVTDVALAAGEAISDILIEMKEKALAASDSSLDAASRTALNEDFKALRDQIATITSNAE 131
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
+ V + S +S I + A ++ +V+
Sbjct: 132 FNGTNLINGTVTSISALANSDGSNTILISDQNFTLAGGTVTVAAAASFASAGDASTLVTT 191
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
I+T + + K+G+ S + + + F+ + D +E+G+G LVDAD+A ES RL +LQ
Sbjct: 192 IETSLDNLNTSLAKLGTASKSLEIHKGFVSRLSDTLEQGIGNLVDADLAKESARLQSLQV 251
Query: 428 QQQLAVQALSIVNNSTARILSLF 450
+QQL VQALSI N + ILS F
Sbjct: 252 KQQLGVQALSIANQAPQTILSFF 274
>gi|218703537|ref|YP_002411056.1| lateral flagellin FliC-like protein [Escherichia coli UMN026]
gi|218430634|emb|CAR11500.1| Lateral flagellin (FliC-like) [Escherichia coli UMN026]
Length = 326
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 93/288 (32%), Gaps = 3/288 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI TN+++M+A + + +L +R+++G R++ +AD+AA IA + + + +
Sbjct: 23 MLSINTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGM 82
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQS 117
I ++ + A + + DV+ +K+ T ++Q E +L
Sbjct: 83 GVALSNINDATAMLQTADSMFDEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQ 142
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ D+ + +++ G N S+T + + T++ T++
Sbjct: 143 QMSDMLQNTTYGGTNLFGVSGTSNTGTDGLFQSAVTFQVGAESSDTMTVNISSQLNTLVT 202
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
D S + + T + + + L A+
Sbjct: 203 DLSAISNSFSADQADTTGTAGVSGGTELTASGSANQMITSISTAMDDVSQIQSKLGASIN 262
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
+ T + + S
Sbjct: 263 RLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITM 310
Score = 70.5 bits (170), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ + D + A A + S +
Sbjct: 90 NDATAMLQTADSMFDEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQ 149
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ T + + + ++ TL +
Sbjct: 150 NTTYGGTNLFGVSGTSNTGTDGLFQSAVTFQVGAESSDTMTVNISSQLNTLVTDLSAISN 209
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
S T + + +M++ I T + + K+G+ +R++ +
Sbjct: 210 SFSADQADTTGTAGVSGGTELTASGSANQMITSISTAMDDVSQIQSKLGASINRLNDTAN 269
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ M+D E +G ++D D A+E++ ++ Q Q + L N+ ++ + SL +
Sbjct: 270 NLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVSSLLQ 326
>gi|194365673|ref|YP_002028283.1| flagellar hook-associated protein FlgL [Stenotrophomonas
maltophilia R551-3]
gi|194348477|gb|ACF51600.1| flagellar hook-associated protein 3 [Stenotrophomonas maltophilia
R551-3]
Length = 400
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/442 (9%), Positives = 109/442 (24%), Gaps = 57/442 (12%)
Query: 1 MTS-ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M+S I T+ + + L ++ ++++G ++ A D+ A + A
Sbjct: 1 MSSRISTSMMFNQSVSLMMAKQAKLSHLEQQIATGSKIVSAKDDPVGAGAAVGLDRSLAA 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQ 116
L + G +++ + + +++ D+M + + D K++ +E+ Q++
Sbjct: 61 LDRMKLNAGNVQNRLGVQENTLAQVNDLMGRVNDLTIQASNPALSAADKKTLITELNQIR 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
L +A G + + D + D Y+
Sbjct: 121 DGLLSLANADDGTGRYVFGGTNDGDPPFAKINGKVVYRGDQTQRQVEVGPDTYVRDSLPG 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+ G +D +
Sbjct: 181 SEIFMRIPTGDGFVDGGAAAGNTGNGVLTNITR--------------------------- 213
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
G+ S + T T
Sbjct: 214 --------------------------DGSDSWNGQSFSVRFTAANQYEVLDGAGNVTGTG 247
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
++ T V +S + + L+
Sbjct: 248 TYKAGDNLEVNGVRLQITGAPVAGDSFNVKPATSRDIFDTMDKLIAALDADTGTTAKMSA 307
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ ++ + + + + G+ + D + ++ + ++ D D A
Sbjct: 308 QQNELQNALRDVARASERMIDSRAAGGAQLKALDNAADMREANGVTLKTTLSQMRDLDYA 367
Query: 417 SESTRLSALQTQQQLAVQALSI 438
++ T Q A S
Sbjct: 368 DALSQYQLQSTALQAAQTIFSQ 389
>gi|207108688|ref|ZP_03242850.1| flagellin B [Helicobacter pylori HPKX_438_CA4C1]
Length = 204
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 20/169 (11%), Positives = 46/169 (27%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G + ++ + G Y V+ + ++ + +
Sbjct: 36 GRLTLTRTDARDIIVSGVNFSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGA 95
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
++ D+ +GS+ + + I + +
Sbjct: 96 QAETNSQGIGAGVTSLKGAMIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVN 155
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
V+ ++ D D A ES S Q A++ N +L L +
Sbjct: 156 VKAAESQIRDVDFAEESANFSKYNILAQSGSFAMAQANAVQQNVLRLLQ 204
>gi|5668688|dbj|BAA82636.1| flagellin protein [Borrelia valaisiana]
Length = 324
Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 56/136 (41%), Gaps = 3/136 (2%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ NL Q+++SSG R++ ++D+AA ++ + + LS S + +
Sbjct: 2 RNNGINAANLSKTQEKLSSGYRINRSSDDAAGMGVSGKINAQIRGLSQASINTSKAINFI 61
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGE 131
+ +++ V+ +K D SIQ EI QL ++ IA + +N
Sbjct: 62 QTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQYNQM 121
Query: 132 NWLRTDLGSSTASIAK 147
+ L + A+
Sbjct: 122 HMLSNKSAAQNVKTAE 137
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 21/208 (10%), Positives = 57/208 (27%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + A T+ G + + A+ S N +
Sbjct: 117 QYNQMHMLSNKSAAQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 176
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + +
Sbjct: 177 IYAANVANLFSGEGAQSAQAAPVQEGAQQEGAQQPAPATAPAQGGVNSPVNVTTTVDANT 236
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E +
Sbjct: 237 SLAKIENAIRMVSDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDEVVAAT 296
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q A+ ++ N +LSL R
Sbjct: 297 TNSILTQSAMAMIAQANQVPQYVLSLLR 324
>gi|312127298|ref|YP_003992172.1| flagellar hook-associated protein 3 [Caldicellulosiruptor
hydrothermalis 108]
gi|311777317|gb|ADQ06803.1| flagellar hook-associated protein 3 [Caldicellulosiruptor
hydrothermalis 108]
Length = 315
Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 17/161 (10%), Positives = 57/161 (35%), Gaps = 3/161 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + L L+ +Q ++++G ++ +D+ + + +++D + +
Sbjct: 3 ITNNMMINNFLINLNKNLSRLDDIQYKMATGKKIRYPSDDPVITARSLRLRTDVSEIEQL 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ +S V+ ++ ++ + + ++ G D I E+ Q++ +
Sbjct: 63 QKNVDDATSWVNTTESALADINESLQRVRELAVRGANGTNTKEDMAQIAKEVAQIKQHII 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV 161
+ + + ++ + S + G
Sbjct: 123 QVGNTNYAGRYIFSGFKTDTAPINSDGSFSDTGDFTSTGGY 163
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ ID I A G IG++ +R+ L ++ + + D DMA +L
Sbjct: 230 LADIDRHIDNVVAQRGDIGALQNRLELIKNRLSDDNVNFTTLLSNNEDVDMAEIIMQLKT 289
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
+ + A+Q + V +L R
Sbjct: 290 AENVYRAALQTGAQV--LPPTLLDFLR 314
>gi|121601983|ref|YP_989315.1| flagellin A [Bartonella bacilliformis KC583]
gi|120614160|gb|ABM44761.1| flagellin A [Bartonella bacilliformis KC583]
Length = 380
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 61/111 (54%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
+ + + + + + + + + A KIGS +++ Q +F+K +
Sbjct: 269 NDFVQMQGVGGLPSVAQSIILNSVQKTVRHAVDVTLTAGSKIGSAVNQVDSQLNFVKRLL 328
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D +E G+G LVDADM +ES +LSALQ QQQL +QALSI N + IL LFR
Sbjct: 329 DNIEAGIGALVDADMNAESAKLSALQVQQQLGIQALSIANQGSQNILGLFR 379
Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 1/179 (0%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+SILTN SAM+A Q LR+I+ NL+ +DR+S+GLR+ A+DN AYWSI+ +MK D+ +S
Sbjct: 3 SSILTNRSAMTALQTLRNIDNNLDKSKDRISTGLRIGSASDNTAYWSISSMMKHDSNTMS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE-RGTDSKSIQSEITQLQSQLR 120
AV DAI LG +V++A ++ + + I+ + + E D IQ I +
Sbjct: 63 AVVDAINLGREQVNVAATAVNLTKESLDDIQKSMVSAREKSDDDIMKIQDSIKGNMQNIS 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ + ++F G+N L + GS + D +V +++ + +D
Sbjct: 123 NAIQSAAFGGKNILSNGGEKVGIAAGYRREGSAVYVDMIEVGGAELNFGVMGPDGTIDM 181
>gi|37654960|gb|AAQ96735.1| flagellin [Burkholderia multivorans]
Length = 620
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/376 (11%), Positives = 116/376 (30%), Gaps = 4/376 (1%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
R+SSG R++ AAD+AA +IA M++ L+ G S + A +G+S+
Sbjct: 1 ITRLSSGKRINSAADDAAGLAIATRMQTQINGLNQGVSNANDGVSMIQTASSGLSQITSS 60
Query: 88 MSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ I+ +D +++Q E+TQ +++ IA +++NG+N L G+ +
Sbjct: 61 LQRIRQLAVQASSGSLSTSDQQALQQEVTQQIAEVNRIASQTNYNGKNVLDGSAGNISFQ 120
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ +V + + + + ++ L L + + + + +
Sbjct: 121 VGANVGQTISLNLSQSLSAASLGKGLVSAGSTLGTLNNLSLDANGNSVTSGAAITAINVL 180
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ + + A + + L + + + +
Sbjct: 181 SDGNGGFTYTDQNNQALSAKAVKNLFGNSTGVGGALNITASGSGSALLSTSQLSTISQAN 240
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ + ++ + + N + + +T
Sbjct: 241 ATPPAGTNTVIGTITGLSIDASTGKDVAAGTQGAITSITVKTNGSGGFNFYDQTGAQLST 300
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
+ S ++ + N V+ T ++ G+
Sbjct: 301 GLVGDNSGTNPGSLLTITKGTGGNGDSVSFTNSVSTQLVNVNAA-TATSFSSQVTAVNGA 359
Query: 385 ISSRIHLQEDFIKLMR 400
++ + + +
Sbjct: 360 VTMALPSATTTLGKIT 375
Score = 64.0 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/237 (10%), Positives = 62/237 (26%)
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
++ + + + + T + + Q G T
Sbjct: 384 KDVAAGTAGAITSLTVTEDTSGNIHFADQNGTDVTATMTAAGTGLFSVVQGNGTTTKASF 443
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
A T SGT S + + + + S + V+ +
Sbjct: 444 AMQGTATAPTISGTITGLSLDASGNNVAPGTQGAITSITVKNTGGTLSYTDQNGADVSSL 503
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ + ++ + S+ N ++ + + + ID
Sbjct: 504 FTGSAGSVAFKSGVSPISYGAPQLAAFSSIDANNAPGTVSSIDISTTTGANQAMESIDNA 563
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
+ +G+ +R + + + ++ DA+ A E+ LS Q
Sbjct: 564 LATVNNIQASLGAAQNRFTAISTTQQAQSTNLSQAQSQIQDANFAQETANLSKAQVL 620
>gi|315932464|gb|EFV11407.1| flagellin A [Campylobacter jejuni subsp. jejuni 327]
Length = 238
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 66/206 (32%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
I A + G + + + A + G+ + S +
Sbjct: 33 GQISAANADAMGFNSYNGGGAKQIVIASSIGAYMSQAGSGFSKGSGFSVGSGKGYSSVLS 92
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+++ V + +T + S ++ T ++ H T ++
Sbjct: 93 ASIQIVSSAASISNTYVVSKGSGFSTGSGNSQFAALKTSTVSAHEATAGVTTLKGAMAVM 152
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+T I IGS+ +++ + + I + + V+ + D D ASES S
Sbjct: 153 DIAETAITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFASESANFSKY 212
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q A+S N +L L +
Sbjct: 213 NILAQSGSYAMSQANAVQQNVLKLLQ 238
>gi|163750563|ref|ZP_02157801.1| flagellar hook-associated protein FlgL [Shewanella benthica KT99]
gi|161329718|gb|EDQ00707.1| flagellar hook-associated protein FlgL [Shewanella benthica KT99]
Length = 404
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 52/426 (12%), Positives = 111/426 (26%), Gaps = 49/426 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + D + +++SSG RV+ A D+ + N +
Sbjct: 3 ISTAQMFNQNINSVLDRQSATNSIMEQLSSGKRVNTAGDDPVAAIGIDNLYQQNALVDQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLR 120
I +S + + ++ + A ++S+ K++ G + ++I E+ +L
Sbjct: 63 VKNIDYATSHLALTESKLGSAEALVSSTKDQVLRAINGTVTDNERQTIADELRSSLEELL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +G + + D+G Q D
Sbjct: 123 AIANSKDESGNYLFSGYETGTQPFAFNTSGNIVYSGDSGVRQSIVASGVTVGTNSPGD-- 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + +
Sbjct: 181 ------------------------------------------SAFMNAPNAMGDFSVNYL 198
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ I AP A + G A +++ D + +
Sbjct: 199 PGQSGDFIVESAKLAPPAVHIPVAPEGYTFDFTDNLAGGVQLEVFDSAGTSLQVVANFDP 258
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ V +S T+ ++ ++ L NT N +LA
Sbjct: 259 SSPVDFNGISVKLDGMPAANDSFTMAPATEVSIFDTLNQAIAILEDPTKVNTPQGNSELA 318
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+++ ID+ G G+ + + + + L D D A+ +
Sbjct: 319 --QILDSIDSGRNRIDFDRGIAGNSLKSVESYKSGHADEKLINSSALSLLEDLDYAAAIS 376
Query: 421 RLSALQ 426
Q
Sbjct: 377 EFEKQQ 382
>gi|89214212|gb|ABD64418.1| flagellin [Bacillus thuringiensis serovar navarrensis]
Length = 219
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+R+++G ++++A+DN A +I M + + S + A+A + +++
Sbjct: 1 ERLATGKKLNNASDNPANIAIVTRMHARESGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+++ T+ S+ E L Q+ I + FN + +
Sbjct: 61 QRMRDLAVQSANGTNSNTNRNSLNKEFQSLTEQIGYIGETTEFNDLSLFNGEN 113
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/216 (10%), Positives = 61/216 (28%)
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ KK A+ + A + + G+ A + T + + +
Sbjct: 4 ATGKKLNNASDNPANIAIVTRMHARESGMRVAIRNNEDAISMLRTAEAALQTVTNILQRM 63
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + T T + + + L
Sbjct: 64 RDLAVQSANGTNSNTNRNSLNKEFQSLTEQIGYIGETTEFNDLSLFNGENRSITLDDIGH 123
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + + + + + + I+ ++ + +G++ +R+ + +
Sbjct: 124 TVDITKHIPPSPTKHDIKISTEQEARVAIRKIEEALQNVSLHRADLGAMMNRLQFNIENL 183
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A+ R+ DADMA E + + ++A
Sbjct: 184 NSQSTALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|332982895|ref|YP_004464336.1| flagellar hook-associated protein 3 [Mahella australiensis 50-1
BON]
gi|332700573|gb|AEE97514.1| flagellar hook-associated protein 3 [Mahella australiensis 50-1
BON]
Length = 289
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 20/179 (11%), Positives = 62/179 (34%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + + + L+ Q ++++G ++ +D+ S + ++D
Sbjct: 3 ITNSMMISNMLRDMSANLNRLDKYQSQLATGRKIRVPSDDPVGASRSLRARTDLARNHQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ + S +D+ ++ +++ V+ + G D + + E+ QL+ +
Sbjct: 63 AKNVDDVISWLDMTESSLAELNSVLQRAREITVQGANGTLADEDRQKVAQELEQLKQHVL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ + + T + + + G+ + G I + V +
Sbjct: 123 QVGNNKYADRYIFAGTKTTAEPFASDGTYSGNDGAIEYGIGPANNIKVNITGNDVDITG 181
>gi|294140192|ref|YP_003556170.1| flagellar hook-associated protein FlgL [Shewanella violacea DSS12]
gi|293326661|dbj|BAJ01392.1| flagellar hook-associated protein FlgL [Shewanella violacea DSS12]
Length = 404
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 55/426 (12%), Positives = 118/426 (27%), Gaps = 49/426 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + D V D++SSG RV+ A D+ + N ++
Sbjct: 3 ISTAQMFNQSITSVLDKQSATSKVLDQLSSGKRVNTAGDDPVAAIGIDNLYQQNALVNQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI---TAGVERGTDSKSIQSEITQLQSQLR 120
I + + +A++ + A ++S+IK+++ G D +I +E+ +L
Sbjct: 63 IKNIDYATGHLAVAESKLGSAESLVSSIKDQVLRGVNGSLTDIDRVTIANEMRSSLEELL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +G+ + S+ + D+G Q + DS
Sbjct: 123 SIANSRDESGKYIFSGNQTSTQPFAFDTAGNIVYSGDSGVRQAVVASGVTVGTNLPGDSV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + +
Sbjct: 183 FMNAANA--------------------------------------------IGDFSVNYL 198
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A+ + G + + D + +
Sbjct: 199 PAQVGEFSVESAKIVTPGAHVPVAPEGYTFTFTDNGVGGVNLEVFDSAATSQVVVANFDP 258
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ +V V +S T+ + ++ ++ + NT + +LA
Sbjct: 259 TNPVSFNGIEVKVDGTPVPGDSFTMSPQTEVSIFDTINQAISLIEDPNKVNTPQGSAELA 318
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+++ + + K G G+ R+ + + + L D D AS T
Sbjct: 319 --QLLDNMASGTKQIDFDRGIAGNDLKRVESYQSSHADEKLVNSSALSLLEDLDYASAIT 376
Query: 421 RLSALQ 426
Q
Sbjct: 377 EFEKQQ 382
>gi|307265480|ref|ZP_07547035.1| flagellar hook-associated protein 3 [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306919434|gb|EFN49653.1| flagellar hook-associated protein 3 [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 297
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 22/167 (13%), Positives = 58/167 (34%), Gaps = 3/167 (1%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ L+ Q+ +S+G R+S +D+ + + +++D A + S
Sbjct: 13 LNDYNNNLERLQKNQNMLSTGKRISRPSDDPVAVAASLRIRTDMARNDAYTKNADDAKSW 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQ---SEITQLQSQLRDIARGSSFNG 130
+DI + +S+ D++ + G + +Q +EI QL++Q+ +
Sbjct: 73 LDITDSALSQLNDLLQRTRELAVEGSNGTLTQEDMQKIVNEIEQLKAQMIQVGNTQYNGR 132
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ + S + ++ ++ +
Sbjct: 133 YIFAGFKTTTQPFSETNNSYSGDNGIIEFEMGPGGNKIAVNVTGDKV 179
Score = 51.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/196 (11%), Positives = 60/196 (30%)
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + +A + G TT +
Sbjct: 88 QRTRELAVEGSNGTLTQEDMQKIVNEIEQLKAQMIQVGNTQYNGRYIFAGFKTTTQPFSE 147
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + + +G S + + + + +
Sbjct: 148 TNNSYSGDNGIIEFEMGPGGNKIAVNVTGDKVFNVDSTGTSQLLVMMDNLKSALDSGDHQ 207
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A+ +++ +D Q++ A ++G+ S+RI L ++ ++ + + DAD+A
Sbjct: 208 ALSNLIADVDKQMENVLAVRAEVGAKSNRIDLIQNRLQNDNYNFTALLSKNEDADLAQVI 267
Query: 420 TRLSALQTQQQLAVQA 435
T L + + ++ A
Sbjct: 268 TNLQMDENVYRASLAA 283
>gi|285018202|ref|YP_003375913.1| flagellin and related hook-associated proteins (hook-filament
junction protein) [Xanthomonas albilineans GPE PC73]
gi|283473420|emb|CBA15925.1| probable flagellin and related hook-associated proteins
(hook-filament junction protein) [Xanthomonas
albilineans]
Length = 401
Score = 91.3 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/440 (11%), Positives = 120/440 (27%), Gaps = 55/440 (12%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T I + + + D + +Q ++S+G R+ AAD+ + A M + AL+
Sbjct: 3 TRISSGMIYNQSLNTMLDKQGRIAHLQQQLSTGQRLVTAADDPVAFGTAVTMDRADAALA 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
+ +++++ + +S+A +M+ + + ++ ++I SE+ L
Sbjct: 63 QFGQNANIVQNRLNLQENALSQAGSLMARVNDLTVEANSGALNTSNRQAIASELKTLHDS 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L ++ + +G + + + + D + +
Sbjct: 123 LLSLSNSTDGSGRYLFGGTADGNPPFTVVGGQAVYNGNQTQRSVEVAPDTKVSDTLPGSE 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
G +D + L + G + + T + ++
Sbjct: 183 IFMRVRTGDGSVDAHAGGSNTGTGLLLDFSRDGSSPGWNGSSYSVVFTDPNTYQVKDSSG 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
G T L A
Sbjct: 243 TVINTGTYTAGDTLNFAG------------------------------------------ 260
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ +S + + + LN T +
Sbjct: 261 ----------LNMHLDGAPAAGDSFQIGPSTNKDVFSTINDLVNVLNTDPVTPTGKAALQ 310
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
A++ + I +AA G+ + I D +++ + + D D A
Sbjct: 311 NALQSSMRDISQATSKISAARASGGAQLAAIDNASDLRSANDVSLKTSLSSVRDLDYADA 370
Query: 419 STRLSALQTQQQLAVQALSI 438
++ Q+ + A +
Sbjct: 371 ISKYQLEQSALKAAQTIFTQ 390
>gi|225163589|ref|ZP_03725897.1| flagellin domain protein [Opitutaceae bacterium TAV2]
gi|224801791|gb|EEG20079.1| flagellin domain protein [Opitutaceae bacterium TAV2]
Length = 274
Score = 91.0 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 51/137 (37%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + D + + + ++T L +S I T I+
Sbjct: 138 SATGFSVPVSEDGSQSVAITAKDLSATDVGIGGIISDTSGAITSLGDFADISAIATAIEN 197
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
G+ SR+ D + + +E R++D D+A+EST+L+ T Q
Sbjct: 198 VATFRASNGAEQSRLGFASDVLTTNKTNLEAANSRIIDVDVAAESTQLARWNTLVQAGTS 257
Query: 435 ALSIVNNSTARILSLFR 451
LS N S +LSL +
Sbjct: 258 MLSQANQSANTVLSLLQ 274
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 76/257 (29%), Gaps = 3/257 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +A A+ L N NL+ +R+SSG R+ AD+A +++ + + A
Sbjct: 4 VINTNFAATIAANNLSASNENLQKSLNRLSSGSRIVSPADDAGGLAVSMKLTAAATRSGA 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQL 119
I S ++ ++ DV++ I T + +D + E QLQ QL
Sbjct: 64 AITNIANTISLLETQDGVLATTGDVLNRIGELYTLYQDPTKSASDKANYDVEFNQLQLQL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + T + + +D + +
Sbjct: 124 TSLAGEKFNGAALFSATGFSVPVSEDGSQSVAITAKDLSATDVGIGGIISDTSGAITSLG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
N + + T + + A + + A +
Sbjct: 184 DFADISAIATAIENVATFRASNGAEQSRLGFASDVLTTNKTNLEAANSRIIDVDVAAEST 243
Query: 240 DQAKGIATIPVPLPAAP 256
A+ +
Sbjct: 244 QLARWNTLVQAGTSMLS 260
>gi|269977703|ref|ZP_06184664.1| flagellin [Mobiluncus mulieris 28-1]
gi|269977708|ref|ZP_06184669.1| flagellin [Mobiluncus mulieris 28-1]
gi|269934093|gb|EEZ90666.1| flagellin [Mobiluncus mulieris 28-1]
gi|269934098|gb|EEZ90671.1| flagellin [Mobiluncus mulieris 28-1]
Length = 70
Score = 91.0 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 29/70 (41%)
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+G++ +R + + + + R+ D DMA E + + Q Q L+ N
Sbjct: 1 LGAVQNRFEHTITNLNVAVENLAASESRVRDTDMAQEMMQFTRNQILSQAGTSMLAQANQ 60
Query: 442 STARILSLFR 451
+LSL R
Sbjct: 61 VPQGVLSLLR 70
>gi|188580455|ref|YP_001923900.1| hypothetical protein Mpop_1193 [Methylobacterium populi BJ001]
gi|179343953|gb|ACB79365.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 397
Score = 91.0 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 58/450 (12%), Positives = 135/450 (30%), Gaps = 55/450 (12%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+S+ + + L+D + Q+R+++GL+VS A DN + AQ S +G L
Sbjct: 3 SSVTLSAATRQNLLSLQDTSALTATTQNRLATGLKVSSALDNPVNFFTAQSFNSRSGDLG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
A+ D+I G + A G++ ++ + K+ + + +
Sbjct: 63 ALLDSISNGIQTIQAANQGITSIQKLIDSAKSTANQALSTQITTTGTAAN--------DF 114
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
A ++ ++ A+ + + + D + ++
Sbjct: 115 TATTNATVTFYVNGASKTATIATGDTIDTAITALNTQAGSTMFSKDTTGKKIVLNASAAI 174
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G AS + + + T + + +
Sbjct: 175 EFASTAGQTALGFTAGTGSATANKYGAGNAAASNSANLTISGVETRNKLAEQYNSLLIQI 234
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + + ++
Sbjct: 235 TQLAKDSSFNGVNLISNGDPSNK------------------------------------- 257
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ + + +DL + + + + + +
Sbjct: 258 ----------LHIAFNERDTANLDVQGQDLTADGLDLDPITGNSGSTVNGQGNFLLDADI 307
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ ++ + A+ GS S + ++DF K + + ++ G L +AD+ E+
Sbjct: 308 KGTLTSLTGASDTLRTASSTFGSNLSVVQNRQDFTKRLVNILDTGASNLTNADLNEEAAN 367
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
AL T+Q L + ALS+ N + IL L R
Sbjct: 368 SQALSTRQSLGISALSLANQAQQGILQLLR 397
>gi|312274362|gb|ADQ57421.1| flagellin [Borrelia persica]
Length = 224
Score = 91.0 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+++SSG R++ A+D+AA +A + + LS S + + + +++ V+
Sbjct: 1 EKLSSGYRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKAINFIQTTEGNLNEVEQVL 60
Query: 89 STIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+K D SIQ EI QL ++ IA + +N L +
Sbjct: 61 VRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMRMLSNKSAADNVKT 120
Query: 146 AK 147
A+
Sbjct: 121 AE 122
>gi|254785379|ref|YP_003072808.1| flagellar hook-associated protein 3 [Teredinibacter turnerae T7901]
gi|237687446|gb|ACR14710.1| flagellar hook-associated protein 3 [Teredinibacter turnerae T7901]
Length = 533
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 38/342 (11%), Positives = 90/342 (26%), Gaps = 5/342 (1%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
A++ + D + + Q+++S+G RV AD+ + + +D + I L
Sbjct: 11 IANKSMSDASREMVHTQEQLSTGARVLTPADDPVASTKIMQLTTDLANIDQYRKNIDLAE 70
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK----SIQSEITQLQSQLRDIARGSS 127
+ + ++ M+ +++ I+ T S+ ++ +E+ +L ++ +
Sbjct: 71 NNLVAEESAMTSVGNLLQRIQELAVQAGNTATLSESEYDALAAEVDTRLDELLNLLNSQN 130
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
NG+ + G D G+ + + +
Sbjct: 131 ANGDYIFGGYKSGQEPFSGTAASGFRYNGDEGQQYVKIANNTTIAAS-DSGKELFVDVES 189
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ + + I +SV + + +F + + T
Sbjct: 190 AENTIHTYASSANKSVPGIAISVGEVIDQEAFDEFYPRDMVVTFNSDNQISPAGKNYTIT 249
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
A G + + G + + + Y S
Sbjct: 250 ERTTGRIVVANQPFIGGNDIEVNGVRFRITGHPVSGEAALPSTRNFGSQGAVVYPYDFSP 309
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRH 349
A T T T N
Sbjct: 310 PANETFTIRVGGRTETLTLDGLVTNAADFVALMNSTGNGNAQ 351
Score = 58.2 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 52/387 (13%), Positives = 91/387 (23%), Gaps = 20/387 (5%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS-----EITQLQSQLR 120
G V IA A D + + + S + + +
Sbjct: 158 NGDEGQQYVKIANNTTIAASDSGKELFVDVESAENTIHTYASSANKSVPGIAISVGEVID 217
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A + + + + + + K+ + V D E +
Sbjct: 218 QEAFDEFYPRDMVVTFNSDNQISPAGKNYTITERTTGRIVVANQPFIGGNDIEVNGVRFR 277
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G G Q + T + T + D
Sbjct: 278 ITGHPVSGEAALPSTRNFGSQGAVVYPYDFSPPANETFTIRVGGRTETLTLDGLVTNAAD 337
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + A T +G K S A GN + T S TS
Sbjct: 338 FVALMNSTGNGNAQILAELGVTVDATGFKVASGAPITLGGGSGNLNAVTGLTVDGSSTSA 397
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G +V TTL + + ++ +
Sbjct: 398 DGVPGKPGDRVFIDSSNKQDVLTTLARFSEA------------MKHFDGSDESRESLDKM 445
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + + K+G+ + + D +G L D D A +T
Sbjct: 446 VGVTLDNLKNAQTSILDVTAKLGARYNTLESTRDLHLDTELVTRDVLGELRDLDYAEATT 505
Query: 421 RLSALQTQQQLAVQAL---SIVNNSTA 444
RLSA Q A S +N +
Sbjct: 506 RLSAQSMILQAAQSTFIRVSQLNLFSQ 532
>gi|315500092|ref|YP_004088895.1| flagellin domain protein [Asticcacaulis excentricus CB 48]
gi|315418104|gb|ADU14744.1| flagellin domain protein [Asticcacaulis excentricus CB 48]
Length = 276
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN AM A Q L N L+ Q R+++GL+V+ A DN A ++IA +SD +L A
Sbjct: 5 SINTNAGAMIALQNLNKTNNELQTAQTRINTGLKVASAKDNGAVYAIATRQRSDVSSLGA 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
V++++ S VD+A + D+++ +K K A + +++ + L+ Q+
Sbjct: 65 VTESLDRAKSAVDVALSAGESVADMLTQMKEKALAASDTSLTTVSRQALNEDFKALRDQI 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAK 147
++FNG N ++ +
Sbjct: 125 SKTVNNATFNGVNLIKNGASAIAPLANA 152
Score = 77.1 bits (187), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 57/97 (58%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + +D I +AA G++G+ S + F+ + D++E G+G LVDAD
Sbjct: 180 FTSAAQAKTIADAVDVSIANVSAALGRLGTSSKSLDAHAQFVSKLVDSMESGIGNLVDAD 239
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+A ES +L ALQT+QQL VQALSI N + + LF+
Sbjct: 240 LAKESAKLQALQTKQQLGVQALSIANQAPGVVTRLFQ 276
>gi|83858824|ref|ZP_00952346.1| flagellin FljN [Oceanicaulis alexandrii HTCC2633]
gi|83853647|gb|EAP91499.1| flagellin FljN [Oceanicaulis alexandrii HTCC2633]
Length = 274
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +I TN AM A Q L N +L+ VQ R+++GL +S A DN ++IAQ M++D
Sbjct: 1 MATINTNPGAMIALQNLNQTNKDLQQVQQRINTGLAISSAKDNGGVFAIAQSMRADVAGY 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQS 117
AV+ ++ L S D+A A D++ +K K A + ++ + T L+
Sbjct: 61 KAVNQSLDLAQSTTDVALAAGEAISDLLVEMKEKALASADTSLDTASRNALNEDFTALRD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAK 147
Q+ I + FNG N ++ TA
Sbjct: 121 QIGTIVANAEFNGTNLIQNGATDITALANA 150
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/203 (23%), Positives = 81/203 (39%)
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
A A + K ++A++ T + + + T N+
Sbjct: 72 STTDVALAAGEAISDLLVEMKEKALASADTSLDTASRNALNEDFTALRDQIGTIVANAEF 131
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ ++ I + +T N VS I
Sbjct: 132 NGTNLIQNGATDITALANADGSNTITIGAEDLSLTGTTITLTAGSQINTTTLANAAVSAI 191
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
+T + +A ++G+ S + + F+ + DA+E+G+G LVDAD+A ES RL +LQ +
Sbjct: 192 ETSLDNLNSALARLGTGSKSLEIHSTFVNKLSDALERGIGNLVDADLAKESARLQSLQVK 251
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQL QALSI N++ + IL FR
Sbjct: 252 QQLGTQALSIANSAPSSILGYFR 274
>gi|77359729|ref|YP_339304.1| flagellar hook-associated protein FlgL [Pseudoalteromonas
haloplanktis TAC125]
gi|76874640|emb|CAI85861.1| putative flagellar synthesis; flagellar regulon; hook-associated
protein [Pseudoalteromonas haloplanktis TAC125]
Length = 418
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/447 (10%), Positives = 114/447 (25%), Gaps = 34/447 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N ++ K+ + Q+RV++G + ++ A S A + + +
Sbjct: 3 LSNNLMYQNSINKILQNQNGVANAQERVNTGQKYLSTSEAPADISQAMLYTNKIQSNEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ I + ++ ++ + + + K+ ++S ++L + +A
Sbjct: 63 TKNINQLNGRLKTEESVLQGINESIQAAKDIALKAGNGAYSKDDLKSLASELTEIQKTLA 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ E+ G ++ + + + Q + ++ +
Sbjct: 123 NLMNTRSEDGKYIFSGYQDSTQPYQFDAASGKYNYQGDQGQHKITIAEGVSIKSSDNGYD 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
T + D G +
Sbjct: 183 TFEKTNARLDVASNTGDASSTLTGSVYVDKQGVFDQFHKEQYNP---------------- 226
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
S T+ + + V A A +I + S
Sbjct: 227 -------------DPDPLVSATANTFNVVVTAGANPGDPDQYEILRDGVAQIPPVSGNVT 273
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
S + KE + + + + + +
Sbjct: 274 DEPIEFAGMKIQLSGAAPGQLDFSLEPPHKENVLNTLQGLITGLNNGTLAGDDFQQVLND 333
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
V+ + + +G + + D + + L++ DMA+ + L+
Sbjct: 334 GVTQLQNASEQVVFTQASLGGRMNVLERVTDSNSALDIQNQSNRSSLLEVDMAAAISELT 393
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLF 450
+T Q S LSLF
Sbjct: 394 QQETALQA-----SQATFGRLAKLSLF 415
>gi|166712055|ref|ZP_02243262.1| flagellar hook-associated protein FlgL [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 401
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 53/443 (11%), Positives = 116/443 (26%), Gaps = 55/443 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ + + L ++ +++SG R+ A D+ A + A++
Sbjct: 5 ISTSMMYSQSVASMGAKQARLNQIEAQLASGQRLVTAKDDPVAAGTAVGLDRALAAITRF 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ +++ + + +S+A D M+ + D K+I +E+T L+ +
Sbjct: 65 GENANNVQNRLGLQENALSQAGDKMARVTELAVQANNSSLSPDDRKAIAAELTALRDSMV 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G S I S ++ D K D ++ +
Sbjct: 125 SLANSTDGTGRYLFGGTADGSAPFIKSSGNVTYNGDQTQKQVEVAPDTFVSDTLPGSEIF 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G +D + L T + + +
Sbjct: 185 MRIRTGDGTVDAHANAANTGTGLLLDFSRDTSTGSWNGASYSVQFTAANTYEVRDSTNAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ G + AA + + S + AS + D
Sbjct: 245 VSTGTYKEGQDINAAGVRMRISGAPAVGDSFQIGASGSKDVFSTIDD------------- 291
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ LN +
Sbjct: 292 ---------------------------------------MVGALNSDTLTAPQKASMINT 312
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ + I A G+ S I ++ ++ + + D D AS
Sbjct: 313 LQSSMRDIAQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTTLSSIRDLDYASAIG 372
Query: 421 RLSALQTQQQLAVQALSIVNNST 443
+ + Q A + +S+
Sbjct: 373 QYQLEKASLQAAQTIFQQMQSSS 395
>gi|71278519|ref|YP_268229.1| flagellar hook-associated protein FlgL [Colwellia psychrerythraea
34H]
gi|71144259|gb|AAZ24732.1| flagellar hook-associated protein FlgL [Colwellia psychrerythraea
34H]
Length = 406
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 44/434 (10%), Positives = 118/434 (27%), Gaps = 41/434 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T+ + ++ + + ++ + +SSG RV A D+A + D ++
Sbjct: 3 VSTSQFYLQSALLMNQKSADVNNQMEHLSSGKRVLTAKDDAVSYGTLSGFNDDLASIEKY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + A ++ K + ++ +QS Q++ L +
Sbjct: 63 KRNITMAENHNSMQEVIFADAETLLDKFKQDMLLANNGRMSNEDLQSIADQMRHGLDQLI 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ E G T
Sbjct: 123 DLGNSQDEKGDYIFSGFQTQQ--------------------------------------- 143
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + + + + + AT+
Sbjct: 144 --KPFSQQVDGSVDYNGDKGVNELQVAKNIQIPTNQTGDAAFLNIDNAIGDFTATYPTVP 201
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ A NT + ++G + S Y+ + +S + + A G
Sbjct: 202 VNTSGVAVESANVVDRNTYNVSTGPHTFSFDPITNYLTVTDSTLPIPAVVFPPAPYVAGQ 261
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
T S + + + K ++ + ++ +T+ ++
Sbjct: 262 TISFDGIDVTLSGNPLPGDSFVINEKQNISIFETLNNAISWAEQGVVSTNQEQHQVDYNT 321
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ + + + + G + Q+ + + KG + D D A +
Sbjct: 322 VLDQLSSAMNHIYSRRADAGIRLQALENQQSKHLDVELNISKGKSSIEDLDFAKAISEFE 381
Query: 424 ALQTQQQLAVQALS 437
+ + Q S
Sbjct: 382 QSKIALTASQQTFS 395
>gi|119775443|ref|YP_928183.1| flagellar hook-associated protein FlgL [Shewanella amazonensis
SB2B]
gi|119767943|gb|ABM00514.1| flagellar hook-associated protein FlgL [Shewanella amazonensis
SB2B]
Length = 401
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/437 (10%), Positives = 109/437 (24%), Gaps = 52/437 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ + + + +++SSG +V+ + D+ + +
Sbjct: 3 ISTSQMFTQNTNNILQKQTETAKLLEQLSSGKKVNTSGDDPVAALGIDNLNQQQALVDQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
I + + IA++ + A ++++ ++ +I GV G ++ + I E+ +L
Sbjct: 63 LKNIDYAKNHLGIAESKLGSAEELVTGLREQILRGVNGGLSPSERQMIADEMRGSLQELL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++A +G + D G V D
Sbjct: 123 NVANTRDESGNFMFSGFKTDTEPFAFDGAGNMVYSGDAGVRDAMISRGIAMGTNVPGDM- 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + ++
Sbjct: 182 ---------------------------------------AFMTSPNALGDYTVNYLSSQA 202
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + PAA T + S V G N ++ +
Sbjct: 203 GDFKVQSAAITNPAAHVEDTYTFNFIDNGSGGVNLEVRDSANGLVTTVNNFDATNPVSFN 262
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ ++ I + I + ++
Sbjct: 263 G---------IDVKLEGTPAAGDSISLAPQAEVSIFDTINKAIALIEDDSRMNSPAGIAE 313
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ++++ D+ + + A G+ + + + L D D A+ T
Sbjct: 314 LAQLLNDTDSGLNQLSTARSVAGNNLKSLESYAGRHAEEQVVNTSALSLLEDLDYATAIT 373
Query: 421 RLSALQTQQQLAVQALS 437
Q S
Sbjct: 374 EFEKQQLALNAVSNVFS 390
>gi|196249401|ref|ZP_03148099.1| flagellar hook-associated protein 3 [Geobacillus sp. G11MC16]
gi|196211158|gb|EDY05919.1| flagellar hook-associated protein 3 [Geobacillus sp. G11MC16]
Length = 297
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 24/210 (11%), Positives = 62/210 (29%), Gaps = 3/210 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + A + +++ L+ Q ++S+G +++ +++ +S+ +
Sbjct: 3 ITQSMLANNMLKQITRSYEKLDQYQTQLSTGKKITRPSEDPVVAMKGIAYRSNLAEVEQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
+ V+ + + + KA + I+ + ++I E+ QL L
Sbjct: 63 KRNFSEAYNWVENSDSALDKATQALQRIRELVVQASNDTYEETQRQAIAKEVRQLTEHLV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + + ++ + +D Y+ +
Sbjct: 123 TIANTKVGDKYIFNGAQTTEPPVTVNADGTIAVSTNDQQLNIELAKGVYIPVNIPPSTAF 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
G + L P D
Sbjct: 183 GAGNGLFSDLQDLAASLENPSTTGDELTGY 212
Score = 44.7 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 30/83 (36%)
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
+ + + +D + ++G+ +RI L ED I + +K + D
Sbjct: 201 NPSTTGDELTGYLDKLDNHLTHLLGVRAELGARMNRIELMEDRIDGQQVIAQKVLSDNED 260
Query: 413 ADMASESTRLSALQTQQQLAVQA 435
D+ L ++ + A+
Sbjct: 261 VDLEKVIIDLKTQESVHRAALAV 283
>gi|218661911|ref|ZP_03517841.1| putative flagellin protein [Rhizobium etli IE4771]
Length = 138
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 72/133 (54%), Positives = 91/133 (68%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN++AM+A Q LR +N +L+ Q RVSSG RV AADNAAYWSIA M+ DN AL
Sbjct: 5 MTSILTNNAAMAALQTLRGVNDSLKDTQGRVSSGYRVEKAADNAAYWSIATTMRCDNLAL 64
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAVSDA+GLG++KVD A A M A+DV+S IK KI A +G D + T ++ +
Sbjct: 65 SAVSDALGLGAAKVDTAYAAMDSALDVVSEIKAKIVAATGKGVDRRRSSRNSTNCRAAAQ 124
Query: 121 DIARGSSFNGENW 133
+SF+GENW
Sbjct: 125 HRPSPASFSGENW 137
>gi|289577713|ref|YP_003476340.1| flagellar hook-associated protein 3 [Thermoanaerobacter italicus
Ab9]
gi|289527426|gb|ADD01778.1| flagellar hook-associated protein 3 [Thermoanaerobacter italicus
Ab9]
Length = 297
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 49/144 (34%), Gaps = 3/144 (2%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ L+ Q+ +S+G ++S +D+ + + +++D A + S
Sbjct: 13 LNNYHNNLEKLQKNQNMLSTGKKISRPSDDPVAVATSLRIRTDMARNDAYTKNADEVQSW 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQ---SEITQLQSQLRDIARGSSFNG 130
++I + + D++ + G +Q EI QL++Q+ +
Sbjct: 73 LNITDTALDQLGDLLQRTRELAVEGANGTLTQADMQKIAKEIEQLKAQMIQVGNTQYNGR 132
Query: 131 ENWLRTDLGSSTASIAKSVIGSFI 154
+ + S +
Sbjct: 133 YIFAGFKTTTQPFSEDNNSYNGDN 156
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 23/183 (12%), Positives = 58/183 (31%)
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + +A A + + G TT +
Sbjct: 88 QRTRELAVEGANGTLTQADMQKIAKEIEQLKAQMIQVGNTQYNGRYIFAGFKTTTQPFSE 147
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
D N + + + + +G S + + + + +
Sbjct: 148 DNNSYNGDNGLIEFEVGAGGNKISVNVPGDKVFDVDLTGTSQLLVMMDNLKSALDSGDHQ 207
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A+ +++ +D Q++ A ++G+ S+R+ L ++ ++ + + DAD+A
Sbjct: 208 AVSNLIADVDRQLENVLAVRAEVGAKSNRVDLIKNRLQDDNYNFTVLLSKNEDADLAQVI 267
Query: 420 TRL 422
T L
Sbjct: 268 TNL 270
>gi|163758024|ref|ZP_02165112.1| flagellin protein [Hoeflea phototrophica DFL-43]
gi|162284313|gb|EDQ34596.1| flagellin protein [Hoeflea phototrophica DFL-43]
Length = 321
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 79/266 (29%), Positives = 120/266 (45%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
TN +AM+A Q LR IN +E+ Q RVSSG RV +A DNAAYWSIA M+SDN A+S V D
Sbjct: 2 TNTAAMAALQTLRTINSEMEMTQARVSSGYRVENAGDNAAYWSIATTMRSDNKAMSTVKD 61
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
A+GLG++KVDIA M +IDV+S IK+K+ A E G D I EIT+L++QL+ I+
Sbjct: 62 ALGLGAAKVDIAYTAMDSSIDVISEIKSKLVAAREPGVDKTKIDKEITELKNQLQSISES 121
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+SF+GENWL ++ + + + + + I+ +
Sbjct: 122 ASFSGENWLNNTSTAAAGTKSVVGGFNRDVNGLVSITTLDINVTSLTMIGAASENLGILT 181
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
R + + +GT ++ T + + +
Sbjct: 182 RDVDANALDPDATTTTARNYYLIDTGATTGTAASGAAIALTATTTDAEVEDMIRVVDSMF 241
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSP 271
+ + A +
Sbjct: 242 SDMTDAASNLGAISKRIDMQEDFVAN 267
Score = 89.0 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 66/89 (74%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+M+ +D+ T AA +G+IS RI +QEDF+ + D+++ G+GRLVDADM ESTRL
Sbjct: 232 DMIRVVDSMFSDMTDAASNLGAISKRIDMQEDFVANLMDSIDSGIGRLVDADMNEESTRL 291
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
ALQTQQQL +Q+LSI NN++ IL+LF+
Sbjct: 292 KALQTQQQLGIQSLSIANNNSQNILALFQ 320
>gi|226225758|ref|YP_002759864.1| flagellin [Gemmatimonas aurantiaca T-27]
gi|226088949|dbj|BAH37394.1| flagellin [Gemmatimonas aurantiaca T-27]
Length = 251
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++AS+ N E ++SSGLR+S AAD+AA +IA +++ + L A
Sbjct: 3 INTNVGALTASRNAFVNNMATESSMRKLSSGLRISRAADDAAGLAIANKLRAQHRGLQAA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV--ERGTDSKSIQSEITQLQSQLRD 121
S+ G++ + IA+ S ++ K + + + S ++ +E++ L +++
Sbjct: 63 SNNAEQGNALLQIAEGAASTIERIIERQKELLVQSASGQNASVSSTLTTEVSTLNTEIGR 122
Query: 122 IARGSSFNGENWLRTDL 138
I + F G +
Sbjct: 123 IVSAAKFQGTAVFASHS 139
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 40/123 (32%)
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
S V + A AY + + DT ++ IG+ +R
Sbjct: 129 FQGTAVFASHSFAVDEDGATFAVNAAYTAPGSAPTSSTGADTNLQSINDVLANIGAGQNR 188
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ +K V+ + D DMA E + Q A LS N + +L+
Sbjct: 189 LDYTVQNLKSAIVNVKAAESTIRDVDMAEEMANFTKNNILTQAAQAMLSQANQGSQSVLN 248
Query: 449 LFR 451
+ R
Sbjct: 249 ILR 251
>gi|255024897|ref|ZP_05296883.1| flagellin [Listeria monocytogenes FSL J1-208]
Length = 105
Score = 91.0 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 44/103 (42%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN ++ + LR N + Q+R++SG R++ + D+AA ++ M + L A
Sbjct: 3 VNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK 106
S +G + A + +S ++ ++ +
Sbjct: 63 SKNSSMGIDLLQTADSALSSMSSILQRMRQLAVQSSNGSFSDE 105
>gi|170725962|ref|YP_001759988.1| flagellar hook-associated protein FlgL [Shewanella woodyi ATCC
51908]
gi|169811309|gb|ACA85893.1| flagellar hook-associated protein 3 [Shewanella woodyi ATCC 51908]
Length = 396
Score = 90.6 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 48/434 (11%), Positives = 109/434 (25%), Gaps = 51/434 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ + + D + D++SSG +V+ A D+ + N +
Sbjct: 3 ISTSQMFNQSINSVLDKQTATSKILDQLSSGKKVNTAGDDPVASVGIDNLNQQNALVDQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I +++ ++++ + A ++++ + ++ + G Q +L+ L ++
Sbjct: 63 MKNIDYAKNRLGLSESKLGTAETLVASTREQVIRAINGGLSESERQMIADELKGTLEELV 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ E+ G T + + Y D ++
Sbjct: 123 AVANTKDESGNYIFAGFETG-----------KQPFAFDSAGNMIYSGDNGAREAVIASGV 171
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
T + N + + + G S K+ T A
Sbjct: 172 TIATNIPGDNAFMNAPSGLGDYSANYLASQVGEFSVDSAKITNPGTYVEDTYTFTMVGAN 231
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ V + I ++ T +
Sbjct: 232 LEVRDSSATLVTTEVGFDPTNPISFNGMEVKLDGMPTAGDSFSITPQSEVSIFDTINQAI 291
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ NT V + +
Sbjct: 292 SLLEDPNKVNTPQGVSELA----------------------------------------Q 311
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+++ ID+ + + A + G+ I + + L D D AS T
Sbjct: 312 ILNNIDSGVNQISIARSETGNSLKSIESYSTHHVDEKLVNSSTLSMLEDLDYASAITEFE 371
Query: 424 ALQTQQQLAVQALS 437
Q S
Sbjct: 372 KQQLALNAVSSVFS 385
>gi|73666435|gb|AAZ79894.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Schwarzengrund]
Length = 177
Score = 90.6 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 32 SSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTI 91
SSGLR++ A D+AA +IA ++ L+ S G S + +++ + + +
Sbjct: 1 SSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQRV 60
Query: 92 KNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
+ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGAN 119
>gi|207092160|ref|ZP_03239947.1| flagellin B [Helicobacter pylori HPKX_438_AG0C1]
Length = 467
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 27/281 (9%), Positives = 74/281 (26%)
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
T+ + +S + G ++ ++ +I + +
Sbjct: 187 FSNTLGVRASYNVMATGGTPVQSGTVRELTINGVEIGTVNDVHKNDADGRLTNAINSVKD 246
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVR 290
+ Q + + A + + G + + + + +G +
Sbjct: 247 RTGVEASLDIQGRINLHSIDGRAISVHAASASGQVFGGGNFAGISGTQHAVIGRLTLTRT 306
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
++ + G Y V+ + ++ + +
Sbjct: 307 DARDIIVSGVNFSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQG 366
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
++ D+ +GS+ + + I + + V+ ++
Sbjct: 367 IGAGVTSLKGAMIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQI 426
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D D A ES S Q A++ N +L L +
Sbjct: 427 RDVDFAEESANFSKYNILAQSGSFAMAQANAVQQNVLRLLQ 467
>gi|5305379|gb|AAD41622.1|AF072133_1 FlaB [Treponema denticola]
Length = 127
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 39/99 (39%)
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
A + ID +K +G +R+ L I + + ++ R+ D
Sbjct: 29 MTIETADAANRSIGTIDEGLKKINKQRTDLGGYQNRMELTVVGIDIAAENLQAAESRIRD 88
Query: 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ADMA + + Q + L+ NN++ ++SL R
Sbjct: 89 ADMAKQMVEYTKNQILSNTGIAMLAQANNNSQLVMSLLR 127
>gi|89214238|gb|ABD64431.1| flagellin [Bacillus thuringiensis serovar kenyae]
Length = 219
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 22/195 (11%), Positives = 59/195 (30%), Gaps = 3/195 (1%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAGVERGTDSKS---IQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ +K+ + E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSSNGTNPNKNCHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
I +Q + + + L + +
Sbjct: 121 IGYTINMTKHIPPSPIQHDIKISTEQEARTAIRKIEEALQCVSLHRADLGAMINRLQFNI 180
Query: 206 IDVSVYDASGTISTK 220
+++ + T +
Sbjct: 181 ENLNNQSMALTDAAS 195
Score = 69.8 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 63/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++ + T T + + + L
Sbjct: 62 RMRDLAVQSSNGTNPNKNCHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++C + +G++ +R+ +
Sbjct: 122 GYTINMTKHIPPSPIQHDIKISTEQEARTAIRKIEEALQCVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ + DADMA E + + ++A
Sbjct: 182 NLNNQSMALTDAASLIEDADMAQEMSDFLKFKLLTEVA 219
>gi|188991634|ref|YP_001903644.1| flagellar hook-associated protein FlgL [Xanthomonas campestris pv.
campestris str. B100]
gi|167733394|emb|CAP51595.1| unnamed protein product [Xanthomonas campestris pv. campestris]
Length = 401
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 56/447 (12%), Positives = 119/447 (26%), Gaps = 56/447 (12%)
Query: 1 MTS-ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
MT+ I T+ + + L ++ ++SSG R+ A D+ A + A
Sbjct: 1 MTNRISTSMMYSQSVSAMTAKQSRLNQLEAQLSSGQRLVTAKDDPVAAGTAVGLDRALAA 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQ 116
++ + +++ + + +++A D M+ + D K+I SE+T L+
Sbjct: 61 ITRFGENANNVQNRLGLQENALAQAGDKMARVTELAVQSNNSSLSPDDRKAIASELTALR 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+ +A + G + I + + D K D ++
Sbjct: 121 DSMVSLANSTDGTGRYLFAGTSDGNAPFIKSNGNVLYNGDQTQKQVEVAPDTFVSDTLPG 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+ G +D + L + T + + +
Sbjct: 181 SEIFMRIRTGDGSVDAHANATNTGTGLLLDFSRDASSGSWNGGSYSVQFTAADTYEVRDS 240
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
+ G + AA + + S + AS T D
Sbjct: 241 TNALVSTGTYKDGEDINAAGVRMRISGAPAVGDSFQIGASGTKDVFSTIDD--------- 291
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ LN T
Sbjct: 292 -------------------------------------------MVAALNSDTQTPTQKAA 308
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ + I A G+ S I ++ ++ + + D D A
Sbjct: 309 MINTLQSSMRDIAQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTTLSSIRDLDYA 368
Query: 417 SESTRLSALQTQQQLAVQALSIVNNST 443
S + + Q A + +S+
Sbjct: 369 SAIGQYELERASLQAAQTIFQQMQSSS 395
>gi|326386941|ref|ZP_08208555.1| flagellin-like protein [Novosphingobium nitrogenifigens DSM 19370]
gi|326208621|gb|EGD59424.1| flagellin-like protein [Novosphingobium nitrogenifigens DSM 19370]
Length = 293
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 44/287 (15%), Positives = 85/287 (29%), Gaps = 3/287 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN SA+ A+ + R+S+G R++ AAD+AA +I+ M S +
Sbjct: 1 MTVINTNISALQAANASNSASSMTSTAMQRLSTGKRINSAADDAAGLAISNSMTSQINGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQS 117
G S A +++ +++ ++ S+QSE+T L
Sbjct: 61 QQGVSNANDGISLAQTAGGALNEVTNMLQRVRQLAVQSSSGTYQNSDRTSMQSEVTNLNQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ DI + FNG G+++A+ A + N + + +
Sbjct: 121 QISDILSNTKFNGNAVFNVASGTASATGADDKSFTIQTGANTTDTVAIVSKAFSGANLFG 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ T + + + + N
Sbjct: 181 GTDTTYNATSTTQALDVSSQANATTTITNVDKALAEVNATQATLGAGQNRLTSVVNNLND 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGN 284
+ + S++ S + N
Sbjct: 241 NITNLSSARSRIQDTDYSSTTTQLAKAQILSQASSAMIAQANQSQQN 287
Score = 78.2 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 49/140 (35%)
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+T T K G + T N T + + ++ +D
Sbjct: 154 FTIQTGANTTDTVAIVSKAFSGANLFGGTDTTYNATSTTQALDVSSQANATTTITNVDKA 213
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ A +G+ +R+ + + + R+ D D +S +T+L+ Q Q
Sbjct: 214 LAEVNATQATLGAGQNRLTSVVNNLNDNITNLSSARSRIQDTDYSSTTTQLAKAQILSQA 273
Query: 432 AVQALSIVNNSTARILSLFR 451
+ ++ N S +LSL R
Sbjct: 274 SSAMIAQANQSQQNVLSLLR 293
>gi|254294684|ref|YP_003060707.1| flagellin domain protein [Hirschia baltica ATCC 49814]
gi|254043215|gb|ACT60010.1| flagellin domain protein [Hirschia baltica ATCC 49814]
Length = 277
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 3/149 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN AM A Q+L N +L Q R+++GL+V+ A DN A ++IAQ M+++ L
Sbjct: 4 LSVNTNSGAMIALQQLNKTNMSLAETQSRINTGLKVAGAKDNGAIFAIAQGMRAEVSGLG 63
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQ 118
++ S D+A + D++ +K K T + + L+ Q
Sbjct: 64 VAQQSLDRVQSTTDVALSAGEAISDLLIDMKEKALSATDATLTTEQRAAYNEDFVALRDQ 123
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAK 147
+ I + FNG N + + A +
Sbjct: 124 IGKIVGNAEFNGANLINGSVTEVGAIANQ 152
Score = 75.9 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 67/138 (48%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ V + + ++ I ++ ++N V + + ++
Sbjct: 140 NGSVTEVGAIANQDGTSTLTVSGEDLSLSGTIVTVTSSQSFNTVTLATAAVGAVSSSLQN 199
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
AA ++G+ + + + F+ + D + G+G LVDAD+A ES L +LQT+QQL VQ
Sbjct: 200 LNAALARLGTAAKSVEIHNIFVGKLEDQLTTGIGNLVDADLAKESAALQSLQTKQQLGVQ 259
Query: 435 ALSIVNNSTARILSLFRG 452
ALSI N + A I SLF+G
Sbjct: 260 ALSIANQAPAIINSLFQG 277
>gi|295697520|ref|YP_003590758.1| flagellar hook-associated protein 3 [Bacillus tusciae DSM 2912]
gi|295413122|gb|ADG07614.1| flagellar hook-associated protein 3 [Bacillus tusciae DSM 2912]
Length = 296
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 46/147 (31%), Gaps = 3/147 (2%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
L++ L +QD+ +SG R++ AD+ A K+ +
Sbjct: 13 LLDLQNSYRRLSSLQDQAASGKRINRPADDPVGVGFAMRYKAQVAYYGQYQQNADMAKGW 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLRDIARGSSFNG 130
+D M++A DV+ + G +++ SE+ QL Q+ I
Sbjct: 73 LDYTDTVMNQAGDVIKRARELAVEGASDTVPPDARQALASEVDQLLQQMVTIGNSQYNGK 132
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDD 157
+ + A
Sbjct: 133 YIFNGQATTTKPYDTANPESSVTNGGQ 159
Score = 50.9 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/225 (9%), Positives = 60/225 (26%)
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
Y + K + + + P + +
Sbjct: 58 YYGQYQQNADMAKGWLDYTDTVMNQAGDVIKRARELAVEGASDTVPPDARQALASEVDQL 117
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ + I+ T +S + D ++
Sbjct: 118 LQQMVTIGNSQYNGKYIFNGQATTTKPYDTANPESSVTNGGQVLYDIGDGVHLDVNVPGS 177
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
+ V + + + N+ +E+ + ID++ +G+ S+R+
Sbjct: 178 RFFGSPTEADNVFAVLKQLRDGLNGNDTAKIEDALGKIDSRYSKMLEVRADVGARSNRVD 237
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
L ++ + M + + + DADM + L + + ++
Sbjct: 238 LAQNRLGDMVQNLTSLLSKTEDADMGKLAIDLKSAENVHMASLAV 282
>gi|114562349|ref|YP_749862.1| flagellar hook-associated protein FlgL [Shewanella frigidimarina
NCIMB 400]
gi|114333642|gb|ABI71024.1| flagellar hook-associated protein 3 [Shewanella frigidimarina NCIMB
400]
Length = 401
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 55/443 (12%), Positives = 119/443 (26%), Gaps = 52/443 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + + ++ SG RV+ A D+ +K N +
Sbjct: 3 ISTGQMFQQNTNSILNKQSATNTIMAQIDSGKRVNTAGDDPVAAIGIDNLKQKNTLIDQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI---TAGVERGTDSKSIQSEITQLQSQLR 120
I +S + A++ + +A ++ ++K + G + + I ++ Q QL
Sbjct: 63 VKNIDYATSHIQQAESQLGQADTLVGSMKESVLRGINGSMTSAERQVIADDMRQSLEQLM 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +G + +S + D+G +
Sbjct: 123 SIANTKDESGNYIFAGNKTNSAPFAFANNGDVVYSGDSGIRKSNVAAGV----------- 171
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ A +
Sbjct: 172 ----------------------------------QVNTNVPGDAAFMNAPNAMGDYGVNY 197
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + V + T G+ A I + +S T S
Sbjct: 198 SSSQQGDLVVSSAKITDSTTYTPGSYSFSFADDGAGGLNISVTDSAAPPVTTVTAFDASV 257
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
P + V KV D+ S ++ + ++ +
Sbjct: 258 PVSVSGIVVKVDGEPQAGDSFSIEEVAQVSIFDTFSKAIALFESGNDTQTP----AGQSE 313
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ++++ ID+ + + G+ + D + + +L D D AS T
Sbjct: 314 LAQLLNNIDSGVNQMSQQRSLTGNSLKVLQQYSDNHIDEKLINTSALSKLEDLDFASAIT 373
Query: 421 RLSALQTQQQLAVQALSIVNNST 443
Q A S V++++
Sbjct: 374 EFEKQQVALSAASSLFSKVSSTS 396
>gi|317130314|ref|YP_004096596.1| flagellar hook-associated protein 3 [Bacillus cellulosilyticus DSM
2522]
gi|315475262|gb|ADU31865.1| flagellar hook-associated protein 3 [Bacillus cellulosilyticus DSM
2522]
Length = 394
Score = 90.6 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/383 (11%), Positives = 105/383 (27%), Gaps = 13/383 (3%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+LTN S + L L +Q+++++G ++S A+ + ++
Sbjct: 6 SMLTNSS----LRHLSQSYQTLHDIQNQLATGKKISRASQDPVIAMNGMRYRTQVVETEQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQL 119
+ + + ++ A A + + M I+ +I EI QL+ L
Sbjct: 62 FNRNLTEVYNWMENADATLDQVTSTMHRIRELAVQASNDTYESTQRANISKEIEQLREHL 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ +A + N + T+ ++ + +G ++ P T +L
Sbjct: 122 QSLANTKANNKYIFNGTNTTNAPLDADQMNVGFNAIEEALADLPNFNADEAVPFTHVLTH 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ E D + + K I V+V + T + ++ A T
Sbjct: 182 NSGRYELVEKNDDGYIFQDVNNPNKSITVAVD------GEGNPESFTHAHTYVNNAGETV 235
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
K + + + T V + +
Sbjct: 236 TDTKDLKERQFVVSRLDSVSTNTQKVEIELLKGVNVATNINPSNVFSTDFFGDIYQLEKA 295
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + ++ R +L + + +
Sbjct: 296 LNDPAATGKELEELIANFDRQIDKVVNERAELGARYNRVEMIDDRMKEQEVIARRILSNN 355
Query: 360 AMEEMVSFIDTQIKCATAAAGKI 382
++ I + +
Sbjct: 356 EDADIEKVITNLLSSENVHRAAL 378
>gi|148558294|ref|YP_001258010.1| flagellin family protein [Brucella ovis ATCC 25840]
gi|148369579|gb|ABQ62451.1| flagellin family protein [Brucella ovis ATCC 25840]
Length = 269
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 1/204 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SILTN SA++A Q L N +LE Q+R+S+GLR+S+A+DNA+YWSIA MKSDN A
Sbjct: 1 MASILTNSSALTALQTLASTNKSLESTQNRISTGLRISEASDNASYWSIATSMKSDNKAN 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE-RGTDSKSIQSEITQLQSQL 119
SAV DA+GLG+ KVD A + ++K + + IK K+ + + D I++EI + + +
Sbjct: 61 SAVQDALGLGAGKVDTAYSAINKIRESVDDIKTKLVSAMGASTEDKGKIETEIKSIVANI 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+++ G N L + + G+ + D V+ T D + ++
Sbjct: 121 NSALSNANYAGSNLLNGPTTDLNVVASYNRSGNAVTVDKITVKATDTDAKTMVKDIVDAG 180
Query: 180 STDGTERYGLLDRNHKIKVEPQVL 203
+
Sbjct: 181 FFTSASDDTAIGTALNTVETALAS 204
>gi|134095090|ref|YP_001100165.1| putative flagellar hook-associated protein 3 [Herminiimonas
arsenicoxydans]
gi|133738993|emb|CAL62041.1| putative flagellar hook-associated protein 3 FlgL-like
[Herminiimonas arsenicoxydans]
Length = 403
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 41/432 (9%), Positives = 103/432 (23%), Gaps = 45/432 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S K+ D+ + Q ++S+ R+ +D+ + A M+ +
Sbjct: 3 ISTNTIFEMGSGKIGDLQAAMLKTQQQISTNRRILAPSDDPVAAAAALGMEQAISINDQL 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + ++ + ++ ++K+ + + D Q TQL+ ++
Sbjct: 63 ATNRLSAKAALSEEESILQSVTLLLQSVKDIVISAGNGALDDVQRQMFATQLRGNFDELM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+A + + G +
Sbjct: 123 --------------------GLANTRDSNGNYIFGGFQSSSPPFMQSATGADYTGDQGQR 162
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ G + V + S + A
Sbjct: 163 MLQVGPARQLASGDSGSAVFEGGVTGNGRFVTAAGLGNTGTGIVSMGSVSDLTQLTGLAY 222
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + AT +
Sbjct: 223 DVTFSVDAITGETTYLVNEP-------------------------PPATPTPQLYVSGDP 257
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ D ++ ++ + + TL+ + T +
Sbjct: 258 IEIGGMRFDIKGKPADGDTFSVKPSTNQSVFTTITDLLTTLSTSAVGPTGQTRLANGLAS 317
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ I + + +G+ I + ++ K + L D D +R +
Sbjct: 318 ANTNIANVLDNISTVRTSVGARLKEIDNLDSAGADLKLQYTKTLSDLQDIDPVEAYSRFT 377
Query: 424 ALQTQQQLAVQA 435
Q + A Q+
Sbjct: 378 QQQFTLEAARQS 389
>gi|73666341|gb|AAZ79847.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Virchow]
gi|73666343|gb|AAZ79848.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Newport]
gi|73666345|gb|AAZ79849.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Newport]
gi|73666347|gb|AAZ79850.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Newport]
gi|73666349|gb|AAZ79851.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Virchow]
gi|73666351|gb|AAZ79852.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Virchow]
gi|73666353|gb|AAZ79853.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Newport]
gi|73666403|gb|AAZ79878.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Bredeney]
gi|73666405|gb|AAZ79879.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Bredeney]
gi|73666407|gb|AAZ79880.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Schwarzengrund]
gi|73666409|gb|AAZ79881.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Bredeney]
gi|73666411|gb|AAZ79882.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Bredeney]
gi|73666413|gb|AAZ79883.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|73666415|gb|AAZ79884.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|73666417|gb|AAZ79885.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|73666419|gb|AAZ79886.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|73666421|gb|AAZ79887.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|73666423|gb|AAZ79888.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|73666425|gb|AAZ79889.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Heidelberg]
gi|73666427|gb|AAZ79890.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Heidelberg]
gi|73666431|gb|AAZ79892.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Schwarzengrund]
gi|73666433|gb|AAZ79893.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Schwarzengrund]
Length = 178
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 32 SSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTI 91
SSGLR++ A D+AA +IA ++ L+ S G S + +++ + + +
Sbjct: 1 SSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQRV 60
Query: 92 KNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
+ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGAN 119
>gi|89214320|gb|ABD64472.1| flagellin [Bacillus thuringiensis serovar darmstadiensis]
Length = 219
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L ++ I + FN + T
Sbjct: 61 QRMRDLAVQSSNGTNSNENRNSLNKEFQSLTEEIGYIVETTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVHMTKHIPPSPTQHDIKIST 144
Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 65/218 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++ + T V T + + + L
Sbjct: 62 RMRDLAVQSSNGTNSNENRNSLNKEFQSLTEEIGYIVETTEFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVHMTKHIPPSPTQHDIKISTEQEARAAILKIEDALQSVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|306845427|ref|ZP_07478001.1| flagellin family protein [Brucella sp. BO1]
gi|306274170|gb|EFM55986.1| flagellin family protein [Brucella sp. BO1]
Length = 282
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 1/204 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SILTN SA++A Q L N +LE Q+R+S+GLR+S+A+DNA+YWSIA MKSDN A
Sbjct: 1 MASILTNSSALTALQTLASTNKSLESTQNRISTGLRISEASDNASYWSIATSMKSDNKAN 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE-RGTDSKSIQSEITQLQSQL 119
SAV DA+GLG+ KVD A + ++K + + IK K+ + + D I++EI + + +
Sbjct: 61 SAVQDALGLGAGKVDTAYSAINKIRESVDDIKTKLVSAMGASTEDKGKIETEIKSIVANI 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+++ G N L + + G+ + D V+ T D + ++
Sbjct: 121 NSALSNANYAGSNLLNGPTTDLDVVASYNRSGNAVTVDKITVKATDTDAKTMVKDIVDAG 180
Query: 180 STDGTERYGLLDRNHKIKVEPQVL 203
+
Sbjct: 181 FFTSASDDTAIGTALNTVETALAS 204
Score = 64.8 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 51/139 (36%), Positives = 75/139 (53%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + K K D+ + +I + ++ A+ ++ ++T +
Sbjct: 144 VVASYNRSGNAVTVDKITVKATDTDAKTMVKDIVDAGFFTSASDDTAIGTALNTVETALA 203
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G+ S+I Q+ F+ ++D++EKGVG LVDADM ES RLSALQ QQQL V
Sbjct: 204 SLATGAATLGAAKSQIDSQKSFLSGLQDSIEKGVGTLVDADMNKESARLSALQVQQQLGV 263
Query: 434 QALSIVNNSTARILSLFRG 452
QALSI N+S ILSLFRG
Sbjct: 264 QALSIANSSNQSILSLFRG 282
>gi|254470235|ref|ZP_05083639.1| flagellin domain protein [Pseudovibrio sp. JE062]
gi|211960546|gb|EEA95742.1| flagellin domain protein [Pseudovibrio sp. JE062]
Length = 532
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 50/399 (12%), Positives = 115/399 (28%), Gaps = 6/399 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I + + L+ + Q+R+S+G +V+ A DN + A + S L
Sbjct: 1 MADITLTAAVRTNLNTLQSTASLISDTQERLSTGKKVNSALDNPNSFFTASSLNSRASDL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQ 118
S + D IG S ++ A G+S ++ K K + +E +L++Q
Sbjct: 61 SNLQDDIGQSVSTLEAADKGISAIDKLLDAAKGKANQALQSKDDETRAKYAAEFNELRTQ 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ DIA+ S + G+N L D + + + + + +
Sbjct: 121 IEDIAKDSGYKGKNLLGGDGNDLLVKFNEDGSSKLNISAVDYTDLDSENSSIKLGGIDET 180
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + + A + A T
Sbjct: 181 IGEVKELDGKQAFKLGITADDILSAAPGTATGSTAVVQTAGPNPATANTFAKDTLELAEG 240
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
G T+ + T++ + + + A D ++ +
Sbjct: 241 GSFTVGGETVIEVTDITKLSDITSALQTKIRETAGNQDAEVTLEA--DGSIKIDKAAANI 298
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
++ A+ G + D+ +++ + + + + T +
Sbjct: 299 ELKYVKSAGAAEAGLADVDITGAGANTDTNAVKLTDLEGFANGDKITLQKEGATSGTILE 358
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
+ V + + + S+ + D
Sbjct: 359 IDENTTVQNLIDAFDGVDGLSASFDAASNSL--VVDNTT 395
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 40/89 (44%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
E + + A A G+ S + ++DF + +E G G+L AD E L
Sbjct: 444 ESLEQVRQAQLDLRAQASTFGTNLSVVTNRQDFTADFINTLEVGAGKLTLADSNLEGANL 503
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+AL TQ Q+A LS+ + +L L R
Sbjct: 504 AALNTQNQIATSTLSLATQAGQSVLQLIR 532
>gi|83858821|ref|ZP_00952343.1| flagellin FljL [Oceanicaulis alexandrii HTCC2633]
gi|83853644|gb|EAP91496.1| flagellin FljL [Oceanicaulis alexandrii HTCC2633]
Length = 277
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 46/149 (30%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN SAM A Q L N +++ VQ+++++GLRV+ A DN++ +++AQ M+SD GAL
Sbjct: 3 LSVHTNTSAMIALQNLNKTNEDIQGVQNKINTGLRVAGAKDNSSVYAVAQGMRSDIGALG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQ 118
+V ++ S D+A A D++ ++ K T ++ S+ +L Q
Sbjct: 63 SVKSSLDRAVSIGDVAIAAGESISDLLIQMREKATAALDPSIDTFSRQAYDSDFKELLDQ 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAK 147
++ I + F+G N L L + A +A
Sbjct: 123 VQVILTNAEFDGANLLNGSLTNGIAFLAD 151
Score = 86.7 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 42/105 (40%), Positives = 57/105 (54%)
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
AN + +VS I T + A +GS ++ F+ + D++ +GV
Sbjct: 173 TLANNASLGTVTLAGNVVSAIQTSLDNVNQALANLGSDLKKMEAHRTFVGKLTDSLTEGV 232
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
G LVDAD+A ES RL ALQ +QQL VQALSI N+ IL+LF G
Sbjct: 233 GNLVDADLAKESARLQALQVKQQLGVQALSIANSEPQIILNLFGG 277
>gi|239834435|ref|ZP_04682763.1| Flagellin [Ochrobactrum intermedium LMG 3301]
gi|239822498|gb|EEQ94067.1| Flagellin [Ochrobactrum intermedium LMG 3301]
Length = 299
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 63/154 (40%), Positives = 91/154 (59%), Gaps = 1/154 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SILTN SA++A Q L N +LE Q+R+S+GLR+S+A+DNA+YWSIA MKSDN A
Sbjct: 1 MASILTNSSALTALQTLASTNKSLEATQNRISTGLRISEASDNASYWSIATSMKSDNKAN 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG-TDSKSIQSEITQLQSQL 119
SAV DA+GLG+ KVD A M+K D + +K + + D I ++IT +Q+ +
Sbjct: 61 SAVQDALGLGAGKVDTAYTSMNKIKDQVDEMKKLLVSAQGASKEDQDKIATQITAIQNNI 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+ A +++ G N L D + +A
Sbjct: 121 KSAASNANYAGSNLLVNDGTTDLKVVASYNRTDT 154
Score = 75.5 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/96 (50%), Positives = 63/96 (65%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + ++T +K T A +G+ S+I Q+ F+ + D++EKGVG LVDADM
Sbjct: 204 TDTEINAAMVKVETALKSLTTGAASLGAAKSQIDSQKSFLSGLSDSIEKGVGTLVDADMN 263
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
ES RLSALQ QQQL VQALSI N+S+ ILSLFRG
Sbjct: 264 KESARLSALQVQQQLGVQALSIANSSSQSILSLFRG 299
>gi|182412272|ref|YP_001817338.1| flagellin domain-containing protein [Opitutus terrae PB90-1]
gi|177839486|gb|ACB73738.1| flagellin domain protein [Opitutus terrae PB90-1]
Length = 273
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 71/210 (33%), Gaps = 3/210 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN++A AS L N L+ +R+SSG ++ + +D+A +++ + + A
Sbjct: 4 VINTNYAATVASNNLAASNTMLQKSLNRLSSGSKIVNPSDDAGGLAVSMKLSAAAVRQGA 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQL 119
V+ IG S + + A V+ I + +D + +E LQ+QL
Sbjct: 64 VATNIGNAVSLLQTQDGALKIAGKVLERISELKVLHSDVTKSSSDKANYDAEFNALQTQL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
RDIA + D+GS + + + L +
Sbjct: 124 RDIAGEEFNGVALFGSADIGSVQITEDGGTSVAIAARNLTSTTDGVGTISASTVDSLGHT 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ ++ +
Sbjct: 184 DVTLANISAAIQNVATMRATNGSEQSRFNF 213
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 47/136 (34%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
D S + I + T + + + + ++ I I+
Sbjct: 138 GSADIGSVQITEDGGTSVAIAARNLTSTTDGVGTISASTVDSLGHTDVTLANISAAIQNV 197
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
GS SR + + + + + +E R+VD D+A+EST+L+
Sbjct: 198 ATMRATNGSEQSRFNFASELVTVNKANLESANSRIVDVDVATESTQLARWNVLVSAGTSM 257
Query: 436 LSIVNNSTARILSLFR 451
L+ N S L L +
Sbjct: 258 LAQANTSAQTALRLLQ 273
>gi|269976621|ref|ZP_06183604.1| flagellin [Mobiluncus mulieris 28-1]
gi|269935180|gb|EEZ91731.1| flagellin [Mobiluncus mulieris 28-1]
Length = 404
Score = 90.2 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 46 YWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERG 102
+I++ ++S G G S V A+ +++ ++ ++ G
Sbjct: 1 GLAISEGLRSQVGGNRQAVRNAQDGISLVQTAEGALNEVHSILQRMRTLAVQGATDSNSG 60
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTA 143
+I +E+ QL+ +L I + ++FNG N L +A
Sbjct: 61 EARNNINTELNQLREELERIGKVTNFNGTNLLDGSASGPSA 101
>gi|258512520|ref|YP_003185954.1| flagellin domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257479246|gb|ACV59565.1| flagellin domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 285
Score = 90.2 bits (221), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/249 (16%), Positives = 83/249 (33%), Gaps = 3/249 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ N SA S L+ +N + ++S+G R++ AAD+ A ++I+Q M + AL+
Sbjct: 6 SVNNNASAASILSNLQYVNNEINTSYQQLSTGNRINSAADDPAGYAISQQMTAQVNALNQ 65
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQL 119
G S + A M++ ++ T+ +S + + E LQ Q+
Sbjct: 66 AIQNAQNGISMLQTASGAMNQITSILQTMNTLAVEAANGTENSDDLNNLDQEFVALQKQI 125
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+I + FN + L +S + + + + I
Sbjct: 126 DNITSQTKFNTKTLLDGTFATSGVVFQINTDSTKNSQLSVTIAAVNIGALFKGHVSTSSP 185
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
T + ++ L + ++ L T+ A +
Sbjct: 186 YLHITSQSLAQQAISLVQAAITSLSSYQAQIGAVEDRLNYTVSNLQNTADNLQNAESTIT 245
Query: 240 DQAKGIATI 248
+ A
Sbjct: 246 NTDMAQAYT 254
Score = 61.7 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/258 (10%), Positives = 82/258 (31%)
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
+ + I+ + D +G +++ + A+ +
Sbjct: 28 NTSYQQLSTGNRINSAADDPAGYAISQQMTAQVNALNQAIQNAQNGISMLQTASGAMNQI 87
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+ T + + + + + S T T +
Sbjct: 88 TSILQTMNTLAVEAANGTENSDDLNNLDQEFVALQKQIDNITSQTKFNTKTLLDGTFATS 147
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ +T +S+ + + ++ +++ + + ++ +S + I
Sbjct: 148 GVVFQINTDSTKNSQLSVTIAAVNIGALFKGHVSTSSPYLHITSQSLAQQAISLVQAAIT 207
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
++ +IG++ R++ ++ D ++ + + DMA T+ S Q QQ+ +
Sbjct: 208 SLSSYQAQIGAVEDRLNYTVSNLQNTADNLQNAESTITNTDMAQAYTQFSQQQVLQQVGL 267
Query: 434 QALSIVNNSTARILSLFR 451
L+ + IL L +
Sbjct: 268 AMLAQADQQPDAILKLLQ 285
>gi|73666335|gb|AAZ79844.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Manhattan]
gi|73666337|gb|AAZ79845.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Manhattan]
gi|73666339|gb|AAZ79846.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Manhattan]
gi|73666383|gb|AAZ79868.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Thompson]
gi|73666385|gb|AAZ79869.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Thompson]
gi|73666387|gb|AAZ79870.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Thompson]
gi|73666389|gb|AAZ79871.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Thompson]
Length = 178
Score = 90.2 bits (221), Expect = 7e-16, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 32 SSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTI 91
SSGLR++ A D+AA +IA ++ L+ S G S + +++ + + +
Sbjct: 1 SSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQRV 60
Query: 92 KNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
+ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGAN 119
>gi|21231390|ref|NP_637307.1| flagellar hook-associated protein FlgL [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66768557|ref|YP_243319.1| flagellar hook-associated protein FlgL [Xanthomonas campestris pv.
campestris str. 8004]
gi|21113055|gb|AAM41231.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66573889|gb|AAY49299.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 401
Score = 90.2 bits (221), Expect = 7e-16, Method: Composition-based stats.
Identities = 55/447 (12%), Positives = 119/447 (26%), Gaps = 56/447 (12%)
Query: 1 MTS-ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
MT+ I T+ + + L ++ ++SSG R+ A D+ A + A
Sbjct: 1 MTNRISTSMMYSQSVSAMTAKQSRLNQLEAQLSSGQRLVTAKDDPVAAGTAVGLDRALAA 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQ 116
++ + +++ + + +++A D M+ + D K+I SE+T L+
Sbjct: 61 ITRFGENANNVQNRLGLQENALAQAGDKMARVTELAVQSNNSSLSPDDRKAIASELTALR 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+ +A + G + I + + D + D ++
Sbjct: 121 DSMVSLANSTDGTGRYLFAGTADGNAPFIKSNGNVLYNGDQTQRQVEVAPDTFVSDTLPG 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+ G +D + L + T + + +
Sbjct: 181 SEIFMRIRTGDGSVDAHANATNTGTGLLLDFSRDASSGSWNGGSYSVQFTAADTYEVRDS 240
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
+ G + AA + + S + AS T D
Sbjct: 241 TNALVSTGTYKDGGDINAAGVRMRISGAPAVGDSFQIGASGTKDVFSTIDD--------- 291
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ LN T
Sbjct: 292 -------------------------------------------MVAALNSDTQTPTQKAA 308
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ + I A G+ S I ++ ++ + + D D A
Sbjct: 309 MINTLQSSMRDIAQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTTLSSIRDLDYA 368
Query: 417 SESTRLSALQTQQQLAVQALSIVNNST 443
S + + Q A + +S+
Sbjct: 369 SAIGQYELERASLQAAQTIFQQMQSSS 395
>gi|212640401|ref|YP_002316921.1| flagellar hook-associated protein FlgL [Anoxybacillus flavithermus
WK1]
gi|212561881|gb|ACJ34936.1| Flagellar hook-associated protein [Anoxybacillus flavithermus WK1]
Length = 290
Score = 90.2 bits (221), Expect = 7e-16, Method: Composition-based stats.
Identities = 17/179 (9%), Positives = 60/179 (33%), Gaps = 3/179 (1%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A + + + L Q ++++G ++ +++ ++ + +
Sbjct: 9 ANNTLRNVSKSYDKLGTYQQQLATGKKIHRPSEDPVVAMKGMHYRTSLTEIEQFQRNLSE 68
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGS 126
+ ++ +++ ++ +V+ + + G D ++I EI QL+ L +A
Sbjct: 69 AYTWMENSESALNHTTNVLQRARELVVQGKNGTLGQEDRRAIAREIEQLKKDLVQVANTK 128
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+ T++ + + + DD + ++ + +
Sbjct: 129 VAGKYIFNGTNIEQAPVTDGTPPTVTNNNDDFMVEVAKGVKLKINVTPNNVFNQGLFDT 187
Score = 47.8 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 14/127 (11%), Positives = 47/127 (37%)
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ + + ++ ++ + + + + +++ ++S +
Sbjct: 150 PPTVTNNNDDFMVEVAKGVKLKINVTPNNVFNQGLFDTLQQIENELASPTNSLDNLLSQL 209
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D I A ++G+ +R+ L E + + ++ + DAD+ T L + ++
Sbjct: 210 DGHINDVLAERAELGARVNRLELVEQRLSEQQLIAKRMISDNEDADIEKIITELKSQESV 269
Query: 429 QQLAVQA 435
+ A+
Sbjct: 270 HRAALSV 276
>gi|89214368|gb|ABD64496.1| flagellin [Bacillus weihenstephanensis]
Length = 219
Score = 90.2 bits (221), Expect = 7e-16, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNNASDNPANVAIVTRMHARASGIRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAIQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDNQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVHITKHIPPSPTQHDIKIST 144
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 63/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A GI A + T + + +
Sbjct: 2 HLATGKKLNNASDNPANVAIVTRMHARASGIRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAIQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDNQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVHITKHIPPSPTQHDIKISTEQEARVAICKIEEALQSVSLHRADLGAMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDSASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|23500861|ref|NP_700301.1| flagellin family protein [Brucella suis 1330]
gi|62317965|ref|YP_223818.1| flagellin family protein [Brucella abortus bv. 1 str. 9-941]
gi|83269942|ref|YP_419233.1| flagellin [Brucella melitensis biovar Abortus 2308]
gi|161621190|ref|YP_001595076.1| flagellin [Brucella canis ATCC 23365]
gi|163845464|ref|YP_001623119.1| hypothetical protein BSUIS_B1374 [Brucella suis ATCC 23445]
gi|189023216|ref|YP_001932957.1| Flagellin [Brucella abortus S19]
gi|225628436|ref|ZP_03786470.1| Flagellin [Brucella ceti str. Cudo]
gi|237817512|ref|ZP_04596502.1| Flagellin [Brucella abortus str. 2308 A]
gi|254691602|ref|ZP_05154856.1| Flagellin [Brucella abortus bv. 6 str. 870]
gi|254698197|ref|ZP_05160025.1| Flagellin [Brucella abortus bv. 2 str. 86/8/59]
gi|254702393|ref|ZP_05164221.1| Flagellin [Brucella suis bv. 3 str. 686]
gi|254706487|ref|ZP_05168315.1| Flagellin [Brucella pinnipedialis M163/99/10]
gi|254711226|ref|ZP_05173037.1| Flagellin [Brucella pinnipedialis B2/94]
gi|254720766|ref|ZP_05182577.1| Flagellin [Brucella sp. 83/13]
gi|254731642|ref|ZP_05190220.1| Flagellin [Brucella abortus bv. 4 str. 292]
gi|256030145|ref|ZP_05443759.1| Flagellin [Brucella pinnipedialis M292/94/1]
gi|256059796|ref|ZP_05449991.1| Flagellin [Brucella neotomae 5K33]
gi|256158324|ref|ZP_05456228.1| Flagellin [Brucella ceti M490/95/1]
gi|256252742|ref|ZP_05458278.1| Flagellin [Brucella ceti B1/94]
gi|256256790|ref|ZP_05462326.1| Flagellin [Brucella abortus bv. 9 str. C68]
gi|260166803|ref|ZP_05753614.1| flagellin [Brucella sp. F5/99]
gi|260544150|ref|ZP_05819971.1| flagellin [Brucella abortus NCTC 8038]
gi|260568706|ref|ZP_05839175.1| flagellin [Brucella suis bv. 4 str. 40]
gi|260757234|ref|ZP_05869582.1| flagellin domain-containing protein [Brucella abortus bv. 6 str.
870]
gi|260759401|ref|ZP_05871749.1| flagellin domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260762644|ref|ZP_05874976.1| flagellin domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883038|ref|ZP_05894652.1| flagellin [Brucella abortus bv. 9 str. C68]
gi|261219821|ref|ZP_05934102.1| flagellin [Brucella ceti B1/94]
gi|261313941|ref|ZP_05953138.1| flagellin [Brucella pinnipedialis M163/99/10]
gi|261318818|ref|ZP_05958015.1| flagellin [Brucella pinnipedialis B2/94]
gi|261323776|ref|ZP_05962973.1| flagellin [Brucella neotomae 5K33]
gi|261752954|ref|ZP_05996663.1| flagellin [Brucella suis bv. 3 str. 686]
gi|261756181|ref|ZP_05999890.1| flagellin [Brucella sp. F5/99]
gi|265985823|ref|ZP_06098558.1| flagellin [Brucella sp. 83/13]
gi|265987175|ref|ZP_06099732.1| flagellin [Brucella pinnipedialis M292/94/1]
gi|265996838|ref|ZP_06109395.1| flagellin [Brucella ceti M490/95/1]
gi|294852977|ref|ZP_06793649.1| flagellin [Brucella sp. NVSL 07-0026]
gi|297250143|ref|ZP_06933844.1| flagellin [Brucella abortus bv. 5 str. B3196]
gi|306840143|ref|ZP_07472928.1| flagellin family protein [Brucella sp. NF 2653]
gi|306841268|ref|ZP_07473979.1| flagellin family protein [Brucella sp. BO2]
gi|2832232|gb|AAC01567.1| flagellin [Brucella abortus]
gi|23464526|gb|AAN34306.1| flagellin family protein [Brucella suis 1330]
gi|62198158|gb|AAX76457.1| flagellin family protein [Brucella abortus bv. 1 str. 9-941]
gi|82940216|emb|CAJ13272.1| Flagellin, C-terminal:Flagellin, N-terminal [Brucella melitensis
biovar Abortus 2308]
gi|161338001|gb|ABX64305.1| Flagellin [Brucella canis ATCC 23365]
gi|163676187|gb|ABY40297.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|189021790|gb|ACD74511.1| Flagellin [Brucella abortus S19]
gi|225616282|gb|EEH13330.1| Flagellin [Brucella ceti str. Cudo]
gi|237787267|gb|EEP61485.1| Flagellin [Brucella abortus str. 2308 A]
gi|260097421|gb|EEW81295.1| flagellin [Brucella abortus NCTC 8038]
gi|260155371|gb|EEW90452.1| flagellin [Brucella suis bv. 4 str. 40]
gi|260669719|gb|EEX56659.1| flagellin domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260673065|gb|EEX59886.1| flagellin domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260677342|gb|EEX64163.1| flagellin domain-containing protein [Brucella abortus bv. 6 str.
870]
gi|260872566|gb|EEX79635.1| flagellin [Brucella abortus bv. 9 str. C68]
gi|260918405|gb|EEX85058.1| flagellin [Brucella ceti B1/94]
gi|261298041|gb|EEY01538.1| flagellin [Brucella pinnipedialis B2/94]
gi|261299756|gb|EEY03253.1| flagellin [Brucella neotomae 5K33]
gi|261302967|gb|EEY06464.1| flagellin [Brucella pinnipedialis M163/99/10]
gi|261736165|gb|EEY24161.1| flagellin [Brucella sp. F5/99]
gi|261742707|gb|EEY30633.1| flagellin [Brucella suis bv. 3 str. 686]
gi|262551135|gb|EEZ07296.1| flagellin [Brucella ceti M490/95/1]
gi|264659372|gb|EEZ29633.1| flagellin [Brucella pinnipedialis M292/94/1]
gi|264664415|gb|EEZ34676.1| flagellin [Brucella sp. 83/13]
gi|294818632|gb|EFG35632.1| flagellin [Brucella sp. NVSL 07-0026]
gi|297174012|gb|EFH33376.1| flagellin [Brucella abortus bv. 5 str. B3196]
gi|306288670|gb|EFM60001.1| flagellin family protein [Brucella sp. BO2]
gi|306404788|gb|EFM61082.1| flagellin family protein [Brucella sp. NF 2653]
Length = 282
Score = 90.2 bits (221), Expect = 7e-16, Method: Composition-based stats.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 1/204 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SILTN SA++A Q L N +LE Q+R+S+GLR+S+A+DNA+YWSIA MKSDN A
Sbjct: 1 MASILTNSSALTALQTLASTNKSLESTQNRISTGLRISEASDNASYWSIATSMKSDNKAN 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE-RGTDSKSIQSEITQLQSQL 119
SAV DA+GLG+ KVD A + ++K + + IK K+ + + D I++EI + + +
Sbjct: 61 SAVQDALGLGAGKVDTAYSAINKIRESVDDIKTKLVSAMGASTEDKGKIETEIKSIVANI 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+++ G N L + + G+ + D V+ T D + ++
Sbjct: 121 NSALSNANYAGSNLLNGPTTDLNVVASYNRSGNAVTVDKITVKATDTDAKTMVKDIVDAG 180
Query: 180 STDGTERYGLLDRNHKIKVEPQVL 203
+
Sbjct: 181 FFTSASDDTAIGTALNTVETALAS 204
Score = 64.4 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 52/140 (37%), Positives = 76/140 (54%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
N + + K K D+ + +I + ++ A+ ++ ++T +
Sbjct: 143 NVVASYNRSGNAVTVDKITVKATDTDAKTMVKDIVDAGFFTSASDDTAIGTALNTVETAL 202
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A +G+ S+I Q+ F+ ++D++EKGVG LVDADM ES RLSALQ QQQL
Sbjct: 203 ASLATGAATLGAAKSQIDSQKSFLSGLQDSIEKGVGTLVDADMNKESARLSALQVQQQLG 262
Query: 433 VQALSIVNNSTARILSLFRG 452
VQALSI N+S ILSLFRG
Sbjct: 263 VQALSIANSSNQSILSLFRG 282
>gi|73666375|gb|AAZ79864.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Anatum]
gi|73666377|gb|AAZ79865.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Anatum]
gi|73666379|gb|AAZ79866.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
London]
gi|73666381|gb|AAZ79867.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
London]
Length = 178
Score = 90.2 bits (221), Expect = 7e-16, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 32 SSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTI 91
SSGLR++ A D+AA +IA ++ L+ S G S + +++ + + +
Sbjct: 1 SSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQRV 60
Query: 92 KNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
+ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGAN 119
>gi|15606765|ref|NP_214145.1| flagellar hook associated protein FlgL [Aquifex aeolicus VF5]
gi|2983978|gb|AAC07524.1| flagellar hook associated protein FlgL [Aquifex aeolicus VF5]
Length = 422
Score = 90.2 bits (221), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/410 (10%), Positives = 100/410 (24%), Gaps = 31/410 (7%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
I N+E + SG ++ + +D+ A + +K++ LS S + + A
Sbjct: 17 NKIRKNVEDKYLEIVSGKKIQNPSDDPASTNQILNLKTELSKLSQFSRNRLFADTVLSYA 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
++ D + ++ +K+ K+ E + L + A N +
Sbjct: 77 DTLLAGIEDRLKSLYSKVIQLSNQVHTPDQLKAAAKEFEEALKLLLNTANEKVGNNYIFS 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
L + + + + + D E Y + +
Sbjct: 137 GNALTTKPFDENTLTYNGGNAEFEILIDEGYKSPVILNGGNIFDGIGGIGETYTVYEIEI 196
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ D V + +
Sbjct: 197 TGFDDTPDNDDTGFRVDSIEIRGDNLDEIIQKLKENFGD--------------------- 235
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
+ + + + T + N
Sbjct: 236 -------SMNIYLYEKSDGTPIIRLEANRDFTVTNINNTNPREIDTNSLLINRWNATRNI 288
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + L + L + ++ V ++ ++
Sbjct: 289 FETIKFIADELSEGRLLFSGPLISEDSNDYFSNNRPDYQVISKPFNKSTEVKLMEQSVER 348
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
KIGSI + ++++ + + +EK DAD+A +
Sbjct: 349 IINFRAKIGSILKELRNEQNYQEDRKLVLEKQKSEAEDADLAKSISEYER 398
>gi|58582203|ref|YP_201219.1| flagellar hook-associated protein FlgL [Xanthomonas oryzae pv.
oryzae KACC10331]
gi|84624095|ref|YP_451467.1| flagellar hook-associated protein FlgL [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|188576763|ref|YP_001913692.1| flagellar hook-associated protein FlgL [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188576955|ref|YP_001913884.1| flagellar hook-associated protein FlgL [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|58426797|gb|AAW75834.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84368035|dbj|BAE69193.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188521215|gb|ACD59160.1| flagellar hook-associated protein 3 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188521407|gb|ACD59352.1| flagellar hook-associated protein 3 [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 401
Score = 89.8 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 53/443 (11%), Positives = 115/443 (25%), Gaps = 55/443 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ + + L ++ ++ SG R+ A D+ A + A++
Sbjct: 5 ISTSMMYSQSVASMGAKQARLNQIEAQLGSGQRLVTAKDDPVAAGTAVGLDRALAAITRF 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ +++ + + +S+A D M+ + D K+I +E+T L+ +
Sbjct: 65 GENANNVQNRLGLQENALSQAGDKMARVTELAVQANNSSLSPDDRKAIAAELTALRDSMV 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G S I S ++ D K D ++ +
Sbjct: 125 SLANSTDGTGRYLFGGTADGSAPFIKSSGNVTYNGDQTQKQVEVAPDTFVSDTLPGSEIF 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G +D + L T + + +
Sbjct: 185 MRIRTGDGTVDAHANAANTGTGLLLDFSRDISTGSWNGASYSVQFTAANTYEVRDSTNAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ G + AA + + S + AS + D
Sbjct: 245 VSTGTYKEGQDINAAGVRMRISGAPAVGDSFQIGASGSKDVFSTIDD------------- 291
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ LN +
Sbjct: 292 ---------------------------------------MVGALNSDTLTAPQKASMINT 312
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ + I A G+ S I ++ ++ + + D D AS
Sbjct: 313 LQSSMRDIAQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTTLSSIRDLDYASAIG 372
Query: 421 RLSALQTQQQLAVQALSIVNNST 443
+ + Q A + +S+
Sbjct: 373 QYQLEKASLQAAQTIFQQMQSSS 395
>gi|260466612|ref|ZP_05812800.1| flagellin domain protein [Mesorhizobium opportunistum WSM2075]
gi|259029618|gb|EEW30906.1| flagellin domain protein [Mesorhizobium opportunistum WSM2075]
Length = 328
Score = 89.8 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 86/292 (29%), Positives = 130/292 (44%), Gaps = 1/292 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SI+TN +A++A Q L NL+ Q R+S+G RVS A+DNAAYWSIA M+SDN A+
Sbjct: 1 MSSIMTNAAALTALQSLNATQKNLDTTQSRISTGYRVSQASDNAAYWSIATTMRSDNQAM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSK-AIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQL 119
S VSDA+GLG+SKVD A GM + + + + + Q EI LQ QL
Sbjct: 61 STVSDALGLGASKVDTAYTGMDSAITTINQIQQKLTASYGQTDASKEKTQVEIAALQKQL 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ A G++F+G N L + G++T + V+ +F R G V I+TID ++ +
Sbjct: 121 KAYADGATFSGTNMLSVNSGTATTAADVKVVSAFNRSSAGAVSISTIDVNVESIKLYEAG 180
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
++ + DR V + A+ T S K+ + + A A
Sbjct: 181 ASATAKGILDTDRLGISGVAAAASAPTLGAAAAATDTYSVASLKIFSGTTAASDTQIAQM 240
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
A + A +S S + +G
Sbjct: 241 MTVVDAALKDMTNAATKLGAAKSSIDLQKTFTSSLMDSIDRGVGQLVDADMN 292
Score = 64.4 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 64/291 (21%), Positives = 99/291 (34%)
Query: 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKK 221
+ + + S KV+
Sbjct: 38 SQASDNAAYWSIATTMRSDNQAMSTVSDALGLGASKVDTAYTGMDSAITTINQIQQKLTA 97
Query: 222 FKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR 281
T + Q + A + + SGT+ + + SA
Sbjct: 98 SYGQTDASKEKTQVEIAALQKQLKAYADGATFSGTNMLSVNSGTATTAADVKVVSAFNRS 157
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
+ S AK + + +
Sbjct: 158 SAGAVSISTIDVNVESIKLYEAGASATAKGILDTDRLGISGVAAAASAPTLGAAAAATDT 217
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
++ + + + +M++ +D +K T AA K+G+ S I LQ+ F + D
Sbjct: 218 YSVASLKIFSGTTAASDTQIAQMMTVVDAALKDMTNAATKLGAAKSSIDLQKTFTSSLMD 277
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
++++GVG+LVDADM ESTRL ALQ QQQL VQALSI N S+ ILSLFRG
Sbjct: 278 SIDRGVGQLVDADMNKESTRLQALQVQQQLGVQALSIANGSSQSILSLFRG 328
>gi|264676577|ref|YP_003276483.1| flagellar hook-associated protein 3 [Comamonas testosteroni CNB-2]
gi|262207089|gb|ACY31187.1| flagellar hook-associated protein 3 [Comamonas testosteroni CNB-2]
Length = 404
Score = 89.8 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 48/435 (11%), Positives = 107/435 (24%), Gaps = 47/435 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + S L +L + ++ ++G RV A+D+ + A+ ++
Sbjct: 6 IGTANMYDSTINNLGSRQSSLVDLMEKTTAGKRVLRASDDPVAAAQAERARTRITRSEND 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+G + ++ + KA + ++ + D + + + Q+QS I
Sbjct: 66 QRVLGAQRDVIAQGESELGKAHGALQDFRDLVVQAGNGSYDQVARDALVQQMQSLRDQI- 124
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
G + G S G + L S
Sbjct: 125 -----LGYANAKDSNGLPIFRGLGSPDTPLQSTPPGSSSQLNPGQSTGSDNGLPISLDGH 179
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ N V
Sbjct: 180 AAWLNVPTGNGVFVVNGAASNSGKAW---------------------------------- 205
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ P+ +G S + + + + + AT T+
Sbjct: 206 -------ADVGSVTDPSKVTGDSYTLVFTKDPTTGEVSYEINSSSATATNPVVPTTPYKE 258
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + + + +
Sbjct: 259 GQAITVGGQQISIKGTPADGDSFTMSPSTRTDIFSVLDQAIATVKGGTGGSTALQQGLGR 318
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+S +D+ + A G R E +K E R D DM + +++
Sbjct: 319 ALSELDSGMNRVQAMRSYAGDQLKRADGLESDMKDQALTQEGARSRAEDIDMITALSQVD 378
Query: 424 ALQTQQQLAVQALSI 438
+ Q A+Q+ +
Sbjct: 379 TQKVGLQAALQSYAQ 393
>gi|17988494|ref|NP_541127.1| flagellin [Brucella melitensis bv. 1 str. 16M]
gi|225686892|ref|YP_002734864.1| Flagellin A [Brucella melitensis ATCC 23457]
gi|256042875|ref|ZP_05445821.1| Flagellin A [Brucella melitensis bv. 1 str. Rev.1]
gi|256112168|ref|ZP_05453089.1| Flagellin A [Brucella melitensis bv. 3 str. Ether]
gi|256261969|ref|ZP_05464501.1| flagellin [Brucella melitensis bv. 2 str. 63/9]
gi|260564111|ref|ZP_05834596.1| flagellin [Brucella melitensis bv. 1 str. 16M]
gi|265989309|ref|ZP_06101866.1| flagellin [Brucella melitensis bv. 1 str. Rev.1]
gi|265993595|ref|ZP_06106152.1| flagellin [Brucella melitensis bv. 3 str. Ether]
gi|81850835|sp|Q8YDM5|FLIC_BRUME RecName: Full=Flagellin
gi|17984285|gb|AAL53391.1| flagellin [Brucella melitensis bv. 1 str. 16M]
gi|225642997|gb|ACO02910.1| Flagellin A [Brucella melitensis ATCC 23457]
gi|260151754|gb|EEW86847.1| flagellin [Brucella melitensis bv. 1 str. 16M]
gi|262764465|gb|EEZ10497.1| flagellin [Brucella melitensis bv. 3 str. Ether]
gi|262999978|gb|EEZ12668.1| flagellin [Brucella melitensis bv. 1 str. Rev.1]
gi|263091453|gb|EEZ15989.1| flagellin [Brucella melitensis bv. 2 str. 63/9]
gi|326411313|gb|ADZ68377.1| Flagellin A [Brucella melitensis M28]
gi|326554602|gb|ADZ89241.1| Flagellin A [Brucella melitensis M5-90]
Length = 282
Score = 89.8 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 1/204 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SILTN SA++A Q L N +LE Q+R+S+GLR+S+A+DNA+YWSIA MKSDN A
Sbjct: 1 MASILTNSSALTALQTLASTNKSLESTQNRISTGLRISEASDNASYWSIATSMKSDNKAN 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE-RGTDSKSIQSEITQLQSQL 119
SAV DA+GLG+ KVD A + ++K + + IK K+ + + D I++EI + + +
Sbjct: 61 SAVQDALGLGAGKVDTAYSAINKIRESVDDIKTKLVSAMGASTEDKGKIETEIKSIVANI 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+++ G N L + + G+ + D V+ T D + ++
Sbjct: 121 NSALSNANYAGSNLLNGPTTDLNVVASYNRSGNAVAVDKITVKATDTDAKTMVKDIVDAG 180
Query: 180 STDGTERYGLLDRNHKIKVEPQVL 203
+
Sbjct: 181 FFTSASDDTAIGTALNTVETALAS 204
Score = 64.4 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 52/140 (37%), Positives = 76/140 (54%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
N + + K K D+ + +I + ++ A+ ++ ++T +
Sbjct: 143 NVVASYNRSGNAVAVDKITVKATDTDAKTMVKDIVDAGFFTSASDDTAIGTALNTVETAL 202
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A +G+ S+I Q+ F+ ++D++EKGVG LVDADM ES RLSALQ QQQL
Sbjct: 203 ASLATGAATLGAAKSQIDSQKSFLSGLQDSIEKGVGTLVDADMNKESARLSALQVQQQLG 262
Query: 433 VQALSIVNNSTARILSLFRG 452
VQALSI N+S ILSLFRG
Sbjct: 263 VQALSIANSSNQSILSLFRG 282
>gi|260752872|ref|YP_003225765.1| flagellin domain protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552235|gb|ACV75181.1| flagellin domain protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 277
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 44/114 (38%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN SA+ A R + NL R+SSG ++ A+DNAA +I+ M + +
Sbjct: 1 MTVINTNTSALRAQNASRLADNNLNTAMTRLSSGKSINSASDNAAGLAISSSMTAQINGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQ 114
+ G S A + + +++ I T+
Sbjct: 61 NQAISNANDGVSLAQTADGALGEVTNMVQRINQLAVQSANGTYQQSDRTDMNTE 114
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/258 (10%), Positives = 75/258 (29%)
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
+ + + +++ + ++ + A + G++
Sbjct: 20 ADNNLNTAMTRLSSGKSINSASDNAAGLAISSSMTAQINGMNQAISNANDGVSLAQTADG 79
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
A N + S + + + V+ + G + +
Sbjct: 80 ALGEVTNMVQRINQLAVQSANGTYQQSDRTDMNTEVQQLQQQIKQVVNGTKFNGSTLFTS 139
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T T + + + + + + + + + I + +
Sbjct: 140 TGTTGTTFKIQTGATSATATDQVTISIGALTALGSVISKLSVGNSTSALKALGTITSALT 199
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ SR++ + + + R+ D D +SE+T L+ Q Q +
Sbjct: 200 SINTVRAGLGASESRLNSVVNNLTTNVTNLSDARSRIQDTDYSSETTNLARSQILSQAST 259
Query: 434 QALSIVNNSTARILSLFR 451
L+ N S +LSL +
Sbjct: 260 AMLAQANQSQQNVLSLLK 277
>gi|297569220|ref|YP_003690564.1| flagellin domain protein [Desulfurivibrio alkaliphilus AHT2]
gi|296925135|gb|ADH85945.1| flagellin domain protein [Desulfurivibrio alkaliphilus AHT2]
Length = 279
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 3/133 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ ++M A L+ I ++ SG R+ AAD+AA IA ++KS
Sbjct: 5 INTDINSMFALGSLQKIQQGQAASLAKIGSGRRIVGAADDAAGLQIANLLKSQALGAGQS 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ IA + + +++ +I K ++IQ++I +L
Sbjct: 65 LRNAADSIAMTQIADGALGQGSEILMSILEKALQAASAAQSPESRQAIQADINRLLGVYN 124
Query: 121 DIARGSSFNGENW 133
+IA ++F G+
Sbjct: 125 EIAGTTTFAGQRV 137
Score = 75.9 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ E V ID+ + + G+ G+ +++ + + + ++ D D
Sbjct: 179 VTTREGAEAAVGAIDSALVRLSTMRGEFGARQNQLVSEMAGLSSAAVNIWSAHSQVADVD 238
Query: 415 MASESTRLSALQTQQQLAVQALSIV-NNSTARILSLFRG 452
+A E+ L+ + +Q + AL+ N + +I L +G
Sbjct: 239 LAEETMNLARINMLRQSGLFALTQGMNLNQTQITELLQG 277
>gi|91792671|ref|YP_562322.1| flagellar hook-associated protein FlgL [Shewanella denitrificans
OS217]
gi|91714673|gb|ABE54599.1| flagellin-like protein [Shewanella denitrificans OS217]
Length = 400
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 50/443 (11%), Positives = 121/443 (27%), Gaps = 53/443 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T ++ + + +++SG RV+ A D+ + N +S
Sbjct: 3 ISTGQMFQQNTKSILNNQSAANKTLQQLASGKRVNTAGDDPVASIAIDNLSQKNVQVSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
I + + IA++ + A +M+T++ + G+ D + I E+ +L
Sbjct: 63 IKNIDYAKNHLSIAESKLGSADSLMTTMRGQFLQGINGSLTAADRQIIADEMKSNLKELL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +G +S + D+G+ DS+
Sbjct: 123 AIANSQDESGNYLFSGFKINSKPFAFDTSGAMVYSGDSGQRTSNVSTQVQIGINAPGDSA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
++KA NA D
Sbjct: 183 --------------------------------------------------FMKAPNAMGD 192
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+A ++G+ + + + + A ++ +
Sbjct: 193 YGVNYLASQQGDFTVDSAKIVSAGSHVPDTYTFNFIPNAPGVDLQVLNSSAAIVATVVNF 252
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T + + + + I + + + ++ K
Sbjct: 253 DANTPVNFNGIEVKLSGIPVSGDSFTMQPLNEVSIFDSLNQAITLLEDPSAANSPQGKSK 312
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ++++ ID+ + A G+ + + + + L D D ++ T
Sbjct: 313 LAQLLNDIDSGQNQVSIARSNTGTGLKSLESISASHDEEQIVNQSALSLLEDLDYSAAIT 372
Query: 421 RLSALQTQQQLAVQALSIVNNST 443
+ S V +++
Sbjct: 373 EYEKQKLALNAVSSVFSKVGSTS 395
>gi|186896760|ref|YP_001873872.1| flagellin domain-containing protein [Yersinia pseudotuberculosis
PB1/+]
gi|186699786|gb|ACC90415.1| flagellin domain protein [Yersinia pseudotuberculosis PB1/+]
Length = 395
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 3/143 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN SA +A L + R+S+G R++ ADNAA I M+
Sbjct: 3 LSIHTNASAKTAINSLSNAGLANAKSSQRLSTGFRINSPADNAAGLQITNRMEKFLNGAG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
I + + IA G+++++ ++ +K T D ++IQ E T+L +
Sbjct: 63 QAKQNIQESIAMLQIADGGLAESVKTLNAMKKLATQAANDTNSAADREAIQKEFTELGKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSS 141
L++ + +N E
Sbjct: 123 LQNALNNTEYNSEKLFADGGKMR 145
Score = 75.9 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 36/103 (34%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
+K + I A +G+ +R+ + + M + +G
Sbjct: 293 VMNMQLLDKDLAMMADKKLSDVIDAYGAFRATLGANQNRLQSSSNNLDNMISNTAQALGS 352
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ D D A E + + Q +V L N +T I +L +G
Sbjct: 353 IKDTDFADEMKNHAQSEMLMQSSVMMLKKANAATQLISTLLQG 395
>gi|212634355|ref|YP_002310880.1| flagellar hook-associated protein FlgL [Shewanella piezotolerans
WP3]
gi|212555839|gb|ACJ28293.1| Flagellin [Shewanella piezotolerans WP3]
Length = 400
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 46/443 (10%), Positives = 119/443 (26%), Gaps = 53/443 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + ++++SG +VS A D+ +K +
Sbjct: 3 ISTAQMFNQTTTNVMKSQSATSKIMEQLASGKKVSTAGDDPVAAIGIDNLKQQGAVVDQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLR 120
I S+++ ++++ + A +V+ +++ + G D ++I E+ +L
Sbjct: 63 IKNIDYASNRLAVSESKIGNAENVVESMREQMLRSVNGTLSDADRQTIADEMRGSLEELL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +G + ++ + D+G
Sbjct: 123 SIANSKDESGNSLFAGFKTNTEPFAFDNNGKVVYSGDSGIR------------------- 163
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
V V ++ + + + + +
Sbjct: 164 --------------DSVVASGVTVGSNIPGDSVFMNAANAIGDYSVNYSSTQQGKFSVES 209
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
T+PV + +G A + T I ++
Sbjct: 210 AKITDPTLPVTGNYTFDFVDNGAGGLDVNVTDSAGTVTTIPNFDAT-------------- 255
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
TV + + + + I + + + ++ +
Sbjct: 256 ---QPLTVDGIELQLKGTPQAGDSFELAPEQNSNIFDTLNSAIALLEDGSKLNSPQGQAE 312
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
M ++++ + + + + G+ + K + + + L D D A T
Sbjct: 313 MAQLLNNVSSGQEQMATSRSVAGNSLKSLENYTSTHKEEQLVNQSALSLLEDLDYAEAIT 372
Query: 421 RLSALQTQQQLAVQALSIVNNST 443
Q S V + +
Sbjct: 373 EFEKQQMSLNAVSSVFSKVGSMS 395
>gi|13560154|emb|CAC36207.1| flagelline [Treponema medium]
Length = 234
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 34/104 (32%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + T + ID +K +G+ +R+ + I
Sbjct: 127 MTAHALGVRDLSDNRTMTIETAEEANHSIGTIDEALKKINKQRADLGAYQNRLEMTVVGI 186
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
+ + ++ R+ DADMA + + Q Q L+ N
Sbjct: 187 DIAAENLQASESRIRDADMAKQMVEYTRNQILNQSGTAMLAQAN 230
Score = 74.0 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 3/157 (1%)
Query: 47 WSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGT 103
++++ M++ L+ S G S + +A+A + + D+M I+
Sbjct: 1 LAVSEKMRAQIRGLNQASTNASNGISFIQVAEAYLQETTDIMQRIRELAVQASNGIYSAE 60
Query: 104 DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
D IQ E++QL +++ IA + FNG N L A + F N +I
Sbjct: 61 DRMQIQVEVSQLVAEVDRIASSAQFNGMNMLTGRFAREGGENAVTGSMWFHIGANMDQRI 120
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
+ + + +D +
Sbjct: 121 RVYIGTMTAHALGVRDLSDNRTMTIETAEEANHSIGT 157
>gi|89214268|gb|ABD64446.1| flagellin [Bacillus thuringiensis serovar alesti]
Length = 219
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + S + A+A + +++
Sbjct: 1 EHLATGKKLNNASDNPANIAIVTRMHARASGTRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L ++ I + FN + T
Sbjct: 61 QRMRDLAVQSSNGTNSNENRNSLNKEFQSLTEEIGYIVETTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVHMTKHIPPSPTQHDIKIST 144
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 64/218 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G A + T + + +
Sbjct: 2 HLATGKKLNNASDNPANIAIVTRMHARASGTRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++ + T V T + + + L
Sbjct: 62 RMRDLAVQSSNGTNSNENRNSLNKEFQSLTEEIGYIVETTEFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVHMTKHIPPSPTQHDIKISTEQEARAAILKIEDALQSVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|37360918|dbj|BAC98368.1| flagellin [Burkholderia glumae]
Length = 384
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 50/297 (16%), Positives = 93/297 (31%), Gaps = 3/297 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 1 MLGINTNVNSLVAQQNLNGSQSALSQAITRLSSGNRINRAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ S + + +S + I T +D + + E+ Q
Sbjct: 61 NQGVQNTNDAVSLIQTTSSQLSSLTSSLQRISTLATQAATGTLSSSDQAAAEKEVAQRIQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA ++FNG+N L G T I +V + D + + I L +
Sbjct: 121 EVNRIAAQTNFNGKNLLDGSAGIVTFQIGANVGQTVSLDLSQSLSAAKIGGGLVQSGTNV 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + + V D + + + A
Sbjct: 181 GTIQNLSLDANGAATTAAQPAITSVNVLSDGKGGFTFTDQNGQTLSTTAVGAIFTTGTAA 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A T+ + ++ + + + + N A
Sbjct: 241 GTGTAVTNLTLATGATSGMTTAQASAAANMISQINSVNAPPTVSNVNISNATSANQA 297
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 50/138 (36%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T+ + T +T+ + + + ++N + + + + + + +
Sbjct: 247 TNLTLATGATSGMTTAQASAAANMISQINSVNAPPTVSNVNISNATSANQAIVSVANALS 306
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ + + ++ AD A E+ LS Q QQ +
Sbjct: 307 TINNLQATLGATQNRLQGIAQTQQANSTNLSSAQSQIQSADFAQETAALSKAQVLQQAGI 366
Query: 434 QALSIVNNSTARILSLFR 451
L+ N+ ++L L +
Sbjct: 367 SVLAQANSLPQQVLKLLQ 384
>gi|157056855|gb|ABV02442.1| flagellin B [Arcobacter butzleri]
Length = 282
Score = 89.8 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 84/207 (40%), Gaps = 3/207 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + N + +++SSGL+V+ AAD+A+ +IA +++ +++
Sbjct: 3 INTNVSSLTAQESASNTNKAITSSLEKLSSGLKVNKAADDASGLAIADKLRTQATSINQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ + IA M++ +++ T+K K+ +SI+ +IT+L QL
Sbjct: 63 ISNGNSAVALLQIADKSMAEQSNILDTVKAKLIQANTATTSADGRESIRKDITKLLEQLD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA+ +++NG L+ D S AS A + + L
Sbjct: 123 NIAQQTNYNGSYLLQLDATSGAASTASLSFQVGEKTTDTITMTGVRSNTAGLALTSLTGL 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDID 207
+ +
Sbjct: 183 AVSGLTTAVAQSGQTAVDSAITTLNGY 209
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 32/86 (37%)
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ +D+ I G IGS ++I + ++ + D D A ES + L
Sbjct: 197 TAVDSAITTLNGYRGDIGSTQNQIESAVRNLSTQATNIKNAESVIRDVDYAQESANFNKL 256
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q A+S N +L L +
Sbjct: 257 NIISQAGSYAISQANAVQQNVLRLLQ 282
>gi|30721698|gb|AAP34180.1| FliC [Pseudomonas aeruginosa]
Length = 167
Score = 89.8 bits (220), Expect = 9e-16, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 38/120 (31%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
S + + + + + V ID IK
Sbjct: 48 ADGTTSAVSGVAITDTGSTGAGTAAGTTTFTEANDTVAKIDISTAKGAQSAVLVIDEAIK 107
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G++ +R + +K + + V GR+ D D A+E+ L+ Q QQ
Sbjct: 108 QIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDFAAETANLTKNQVLQQAGT 167
>gi|260466611|ref|ZP_05812799.1| flagellin domain protein [Mesorhizobium opportunistum WSM2075]
gi|259029617|gb|EEW30905.1| flagellin domain protein [Mesorhizobium opportunistum WSM2075]
Length = 357
Score = 89.8 bits (220), Expect = 9e-16, Method: Composition-based stats.
Identities = 82/325 (25%), Positives = 128/325 (39%), Gaps = 1/325 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI+TN +A++A Q L N +LE Q R+S+G RVS+A+DNAAYWSIA M+SDN AL
Sbjct: 1 MASIMTNAAALTALQSLNATNKSLEQTQSRISTGYRVSEASDNAAYWSIATTMRSDNQAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN-KITAGVERGTDSKSIQSEITQLQSQL 119
S V DA+GLG+SKVD A GM+ A+D + IK ++ + Q+EIT LQ+Q+
Sbjct: 61 STVQDALGLGASKVDTAYTGMNNALDAIGKIKTKLLSTVGQTDAAKAKTQTEITALQAQM 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ A ++F+G N+L + + I + I V
Sbjct: 121 KSFADSATFSGSNFLSVTSKQVAGNNDGVQPDAHIVSSFNRSSSGAISLGTIDINVESTK 180
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
D + ++ + D + YD++ + + A +AA
Sbjct: 181 LFDSGLAADVKNQGTLDRQTSVYSTAADQAQYDSAYAAALATGGTDIAANAAGQAAVTNT 240
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
K L + T S + + +
Sbjct: 241 TPTKIDNVSAFNLDITASGVTDDIITQMIGKIDNVMSQLTDQATILGAAKSSIDLQKTFT 300
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTT 324
+ ++ EST
Sbjct: 301 QSLMDSIDRGVGQLVDADMNKESTR 325
Score = 64.0 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 44/95 (46%), Positives = 63/95 (66%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ +M+ ID + T A +G+ S I LQ+ F + + D++++GVG+LVDADM
Sbjct: 261 TDDIITQMIGKIDNVMSQLTDQATILGAAKSSIDLQKTFTQSLMDSIDRGVGQLVDADMN 320
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ESTRL ALQ QQQL +Q+LSI N+S+ ILSLF+
Sbjct: 321 KESTRLQALQVQQQLGIQSLSIANSSSQSILSLFK 355
>gi|34557839|ref|NP_907654.1| flagellin A [Wolinella succinogenes DSM 1740]
gi|155338|gb|AAA61598.1| flagellin [Wolinella succinogenes]
gi|34483557|emb|CAE10554.1| FLAGELLIN [Wolinella succinogenes]
Length = 518
Score = 89.8 bits (220), Expect = 9e-16, Method: Composition-based stats.
Identities = 35/280 (12%), Positives = 79/280 (28%)
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+V ST+ + I + + S I+ K + +
Sbjct: 239 SWSVQATGSTNVASGTIKGLEINGITIGTVTDVQKNDSDGRLIAAINAVKDQTGVEASID 298
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
+ + + + S + T R+ DI +
Sbjct: 299 EQGRLNLNSTDGRAVQVKTTSASTILGGGSMGTASAGAGATTVGRITLTRLDARDIQISG 358
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
T N + + V+ +++ + + +
Sbjct: 359 TNANLVGLVASGGGAGSGIGAMAETTVNLRDVKGKFNENVASAAGANANASIATDNANGI 418
Query: 352 TDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
++ ++ IK +GS+ +++ + I + + V+ +
Sbjct: 419 GAGVTSLKGAMVVMDIAESAIKMLDKVRSDLGSVQNQMTSTVNNITITQVNVQAAESNIR 478
Query: 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D A+ES+ S L Q A+S N+S IL L +
Sbjct: 479 EVDFAAESSNYSKLNILAQAGSYAMSQANSSQQNILRLLQ 518
Score = 85.6 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN SA++A + + L +++SSGLR++ AAD+A+ +IA +++ +L
Sbjct: 5 INTNVSALNAQAQGGFNSTKLSSSLEKLSSGLRINKAADDASGMAIADSLRTQANSLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
G V IA M + I ++ TIK K T + T K++Q++I +L L
Sbjct: 65 IKNTNDGIGIVQIADKAMDEQIKILDTIKTKATQSAQDGQTTTTRKALQADINRLIEGLD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+IA +S+NG++ L + + + L+ ++ S
Sbjct: 125 NIAATTSYNGQSLLSGSFTNKEFQVGAYSNQTIKASIGATSSDKIGQVRLETSGQIVAS 183
>gi|89214312|gb|ABD64468.1| flagellin [Bacillus thuringiensis serovar londrina]
Length = 212
Score = 89.8 bits (220), Expect = 9e-16, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSSNGTNSNKNRHSLNKEFQSLIEQIGYIGETTEFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNMTKHIPPSPTQHDIKIST 144
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/218 (9%), Positives = 59/218 (27%), Gaps = 7/218 (3%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++ + T + + + L
Sbjct: 62 RMRDLAVQSSNGTNSNKNRHSLNKEFQSLIEQIGYIGETTEFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNMTKHIPPSPTQHDIKISTEQEARAAILKIEEALQSVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ DA MA E + + ++A
Sbjct: 182 NLNSQSMALT-------DAAMAQEMSDFLKFKLLTEVA 212
>gi|218515034|ref|ZP_03511874.1| flagellin C protein [Rhizobium etli 8C-3]
Length = 125
Score = 89.8 bits (220), Expect = 9e-16, Method: Composition-based stats.
Identities = 46/80 (57%), Positives = 61/80 (76%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ TAA +GSIS+RI LQE+ + + D+++ G+GRLVDADM ES+RLSALQTQQQL
Sbjct: 3 LGAMTAAGSALGSISTRIQLQENLVSGLHDSIDSGIGRLVDADMEEESSRLSALQTQQQL 62
Query: 432 AVQALSIVNNSTARILSLFR 451
+Q+LSI N+S IL+LFR
Sbjct: 63 GIQSLSIANSSAQNILTLFR 82
>gi|99082716|ref|YP_614870.1| flagellin-like [Ruegeria sp. TM1040]
gi|99038996|gb|ABF65608.1| Flagellar filament 33 kDa core protein (Class B) [Ruegeria sp.
TM1040]
Length = 282
Score = 89.4 bits (219), Expect = 9e-16, Method: Composition-based stats.
Identities = 48/145 (33%), Positives = 71/145 (48%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN A A + L D E VQ+ VS+G V A D+AA W+I++IM SD
Sbjct: 1 MTSINTNPGAEIALRVLSDRQVEKEEVQEDVSTGKEVDKAKDSAAIWAISEIMGSDLAGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
A S + +G + V +A AG + +++ +K +D I+ ++ Q Q+
Sbjct: 61 EATSKGLNIGEATVAVASAGAEQITSLLTDMKELTIQANSGVSDYSKIEEQLAQKTEQIN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
I S FNG N L TD + +
Sbjct: 121 TIISSSGFNGVNLLATDTDGNGGTS 145
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 50/99 (50%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
N + + + I+ ++ AT A +G+ + ++ Q+ F+ + DAV G+ L
Sbjct: 182 NRTTVTDAASARTALGEIEGFLRYATEGAASLGAGAQQMAEQDVFLDKLSDAVRLGISEL 241
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
D DM +TR AL Q+QL+ +LSI N S + SL
Sbjct: 242 TDTDMEDAATRYEALSVQEQLSGLSLSIANASPGSLRSL 280
>gi|89214370|gb|ABD64497.1| flagellin [Bacillus weihenstephanensis]
gi|89214372|gb|ABD64498.1| flagellin [Bacillus weihenstephanensis]
Length = 219
Score = 89.4 bits (219), Expect = 9e-16, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I+ + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYISETTEFNDLSVFDGQSRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNLTKHIPPSPTQHDIKIST 144
Score = 70.2 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 61/218 (27%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYISETTEFNDLSVFDGQSRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNLTKHIPPSPTQHDIKISTEQEARTAIRKIEEALQNLSLHRADLGAMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|89214316|gb|ABD64470.1| flagellin [Bacillus thuringiensis serovar jegathesan]
Length = 219
Score = 89.4 bits (219), Expect = 9e-16, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 47/144 (32%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + + S + A++ + +++
Sbjct: 1 EHLATGKKLNNASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAESALQTVTNII 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRHSLNKEFQSLTEQISYIGQTTEFNDLSIFDGPNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVHMTKHIPPSPTQHDIKIST 144
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 64/218 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNNASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAESALQTVTNIIQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRHSLNKEFQSLTEQISYIGQTTEFNDLSIFDGPNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVHMTKHIPPSPTQHDIKISTEQEAKAAIRKIEEALQSVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|294501823|ref|YP_003565523.1| flagellar hook-associated protein FlgL [Bacillus megaterium QM
B1551]
gi|294351760|gb|ADE72089.1| flagellar hook-associated protein FlgL [Bacillus megaterium QM
B1551]
Length = 293
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 15/108 (13%), Positives = 51/108 (47%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A ++ +++ + LE +Q+++S+G +++ +D+ + +S+ ++ +
Sbjct: 9 AANSLKQISNSYNKLETLQNQLSTGKKITRPSDDPIVATKGMAYRSNLSEVNQYKRNLTE 68
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQS 117
S D +++G+ + ++ K + G+ +S Q+ +++
Sbjct: 69 AQSWFDSSESGLEQVNSILQRTKELVVQGLNGTNESDDRQAIAREIEQ 116
Score = 47.8 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 43/103 (41%)
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
+ + N+ +++++ + +DTQ+ A ++G+ S+R+ L E+
Sbjct: 180 NIFGQGAFDLMNNVQTAFEQNDVNSLKDLSTQVDTQLSTLLAERSELGARSNRLELIENR 239
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+ K + DAD+ T L+ ++ + A+ +
Sbjct: 240 LDSQEITATKMLSNNEDADIEKVITDLTVQESVHRAALGVGAQ 282
>gi|254459847|ref|ZP_05073263.1| flagellar hook-associated protein 3 [Rhodobacterales bacterium
HTCC2083]
gi|206676436|gb|EDZ40923.1| flagellar hook-associated protein 3 [Rhodobacteraceae bacterium
HTCC2083]
Length = 420
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 55/444 (12%), Positives = 130/444 (29%), Gaps = 34/444 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI T + + D+N ++V Q ++S+G + +A+++ ++ L
Sbjct: 2 SISTKLFSDRMLTRFADLNDEIQVRQTKISTGQAIIEASESPLAAVELSALEERVSQLDG 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQL 119
+GL ++ ++ +S ++S ++ + + + + E+ Q+ +
Sbjct: 62 FKRNVGLAQDRLVLSDTTLSDVDTILSRLREQAITASSSTANVSDLNAIEIEVAQMFDAM 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
D+A + NG+ D G + + ++
Sbjct: 122 VDLANTRTSNGQALFGGYATDGLPFQEGKDGRIVYHGDGGSHTLAASE--TMRLPTSVNG 179
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S + + + + SG + L + + + + TF
Sbjct: 180 SEVFMQVQTEAGSQGMFDIIDSFGAALATELTTISGITTEGDKNLTLSVNSDREPRDWTF 239
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D + + + D + +
Sbjct: 240 DLSGPDGAVTIVAKDVV-----------------------------DGSTQRMLEAINAQ 270
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ G T L + + ++ TL++ +
Sbjct: 271 TQNTGVFAMEVDGQLELRSSTGGIELSNLEVEGVDLAMRQPKFTLSVGEDPIEILVPKSQ 330
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+E + I + + +G+ R QE ++ ++E V L AD+
Sbjct: 331 RLEAQIEKIVAAGESIAVSRTTVGARMVRAETQERTLETRSLSLELKVDELASADLEKLI 390
Query: 420 TRLSALQTQQQLAVQALSIVNNST 443
T + L Q +A QA S + T
Sbjct: 391 TEMQTLMLTQNVARQAYSQIGQRT 414
>gi|73666397|gb|AAZ79875.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Infantis]
gi|73666399|gb|AAZ79876.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Infantis]
gi|73666401|gb|AAZ79877.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Infantis]
Length = 178
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 61/175 (34%), Gaps = 3/175 (1%)
Query: 32 SSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTI 91
SSGLR++ A D+AA +IA ++ L+ S G S + +++ + + +
Sbjct: 1 SSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQRV 60
Query: 92 KNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
+ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGAND 120
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
I Q +D + + + T Y +
Sbjct: 121 GETIDIDLKQINSQTLGLDSLNVQKAYDVKDTAVTTTAYADNGTTLDVSGLTDAA 175
>gi|257457498|ref|ZP_05622666.1| flagellar hook-associated protein 3 [Treponema vincentii ATCC
35580]
gi|257445121|gb|EEV20196.1| flagellar hook-associated protein 3 [Treponema vincentii ATCC
35580]
Length = 414
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/437 (11%), Positives = 106/437 (24%), Gaps = 41/437 (9%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N +S +R L V ++S+ R+ D+ + KS L
Sbjct: 1 MQRISSNMQHSDSSYSVRRQESRLHKVNSQLSTQRRIQQLRDDPIAAGHSVRYKSLLTRL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQS 117
+ + +A+A M A+ +M ++ AG ++ E+ +L
Sbjct: 61 DRFEKNAKTLNDQYKVAEAPMQSALSIMQRLRELSVAGATGTYTDSDLKKMAPEVDELLY 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L A S +G
Sbjct: 121 ELVQTANSFSADGTRLFAGTKSF------------------------------------- 143
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + + + ID ++ + +
Sbjct: 144 -TEPFEVVMGDIDGAGSAVITNVRYNGSIDTKQVESDELSFMDANQAGNRVFWAERQTLF 202
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ A+ + +++ + S V
Sbjct: 203 SATDARNFIVQQDSAIEVDGVTIPLIAGDNVYAIMSKINSSGAAVKASLDPVTNGMNIET 262
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
T + + SG S+ I A +
Sbjct: 263 TDARQLWLRDAGEGTVLSSLGLVKPQQRPPYNLADSVRVSGGSLFDAVIAMRNAMYAGDH 322
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ +++ +D I+ TA + GS R + + V R D D+
Sbjct: 323 ESLGGKVLGSVDGAIENLTARLAENGSRYERAEAALARLNMQIPNVTGAESREADLDLTQ 382
Query: 418 ESTRLSALQTQQQLAVQ 434
+ L + Q ++
Sbjct: 383 AISDLKMYEYTHQASLS 399
>gi|217972605|ref|YP_002357356.1| flagellar hook-associated protein FlgL [Shewanella baltica OS223]
gi|217497740|gb|ACK45933.1| flagellar hook-associated protein 3 [Shewanella baltica OS223]
Length = 403
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/420 (10%), Positives = 98/420 (23%), Gaps = 50/420 (11%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
+ D++SSG +V+ A D+ + N + I ++++ + ++
Sbjct: 20 QTATSKILDQLSSGKKVNTAGDDPVASQGIDNLNQKNALVDQFMKNIDYATNRLAVTESK 79
Query: 81 MSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+ A D+ +I+ + G GT+ + I E+ +L IA +G
Sbjct: 80 LGSAEDLTGSIREQVMRAINGTLSGTERQMIADEMKGSMEELLSIANSKDESGNYMFSGF 139
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ I ++ + + + L
Sbjct: 140 STDKEPFAFDNSTPPKIVYSGDSGVRNSLVQTGVAMGTNIPGDSAFMKAPNGLGDYSVNY 199
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ Q + + A N + V A
Sbjct: 200 LASQQGEFSVKTAKIADAATYVADTYTFKFIDNGAGGTNLQVLDSANNPVANVANFDATN 259
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
N +
Sbjct: 260 PVNFNG-----------------------------------------------IDVKIDG 272
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
+ I S I + + + + ++++ ID+ + ++
Sbjct: 273 KPNAGDSFTMEPQAEVSIFDTISSAIALIEDPNSANTPQGRAQLAQILNNIDSGVNQISS 332
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
A G+ + + + + L D D AS T Q S
Sbjct: 333 ARSVAGNNLKVVESYTETHTEEKVVNTSALSLLEDLDYASAITEFEKQQLALNAVSNVFS 392
>gi|23099961|ref|NP_693427.1| flagellar hook-associated protein FlgL [Oceanobacillus iheyensis
HTE831]
gi|22778192|dbj|BAC14462.1| flagellar-hook associated protein 3 [Oceanobacillus iheyensis
HTE831]
Length = 293
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/257 (10%), Positives = 79/257 (30%), Gaps = 3/257 (1%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
+ + + L + N + +++ +G +++ +D+ +S+ +
Sbjct: 9 SNNMLRNLTNSNAQMNKYMEQLYTGKKITKPSDDPVVAMKGIGYRSELVRVEQYQRNTSE 68
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIARGS 126
++ +D + + + +A M ++ +QS E +L+ L DIA +
Sbjct: 69 VNNWMDNSDSALDQATSAMQRLRELAVKANNGTNSEDELQSILQEANELKGHLTDIANTN 128
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
+ T+ + ++ + + D+ V + + ++ +
Sbjct: 129 VNGKYIFNGTNTDTPPVTVDEDGNITTEFQDSDVVIEVSAGTKIKANVDGGEAFGGDPDL 188
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+ +D + L + + I + +L N +Q
Sbjct: 189 FTAVDNFIDNLESGENLDESIGELDTGINQIINSRAELGARMNRLELIENRLSEQEIVAT 248
Query: 247 TIPVPLPAAPAAPNTTS 263
A A T
Sbjct: 249 QTMSDNEDADYAETITK 265
Score = 56.7 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/215 (13%), Positives = 57/215 (26%)
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+A A + ++ + T I
Sbjct: 65 NTSEVNNWMDNSDSALDQATSAMQRLRELAVKANNGTNSEDELQSILQEANELKGHLTDI 124
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
N + N+ T V E + K ++
Sbjct: 125 ANTNVNGKYIFNGTNTDTPPVTVDEDGNITTEFQDSDVVIEVSAGTKIKANVDGGEAFGG 184
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
L D ++E + +DT I + ++G+ +R+ L E+ +
Sbjct: 185 DPDLFTAVDNFIDNLESGENLDESIGELDTGINQIINSRAELGARMNRLELIENRLSEQE 244
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ + DAD A T+L ++ + A+ A
Sbjct: 245 IVATQTMSDNEDADYAETITKLITQESLHRAALSA 279
>gi|254699269|ref|ZP_05161097.1| Flagellin [Brucella suis bv. 5 str. 513]
gi|261749711|ref|ZP_05993420.1| flagellin [Brucella suis bv. 5 str. 513]
gi|261739464|gb|EEY27390.1| flagellin [Brucella suis bv. 5 str. 513]
Length = 282
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 1/204 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SILTN SA++A Q L N +LE Q+R+S+GLR+S+A+DNA+YWSIA MKSDN A
Sbjct: 1 MASILTNSSALTALQTLASTNKSLESTQNRISTGLRISEASDNASYWSIATSMKSDNKAN 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK-SIQSEITQLQSQL 119
SAV DA+GLG+ KVD A + ++K + + IK K+ + + + K I++EI + + +
Sbjct: 61 SAVQDALGLGAGKVDTAYSAINKIRESVDDIKTKLVSAMGASIEDKGKIETEIKSIVANI 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+++ G N L + + G+ + D V+ T D + ++
Sbjct: 121 NSALSNANYAGSNLLNGPTTDLNVVASYNRSGNAVTVDKITVKATDTDAKTMVKDIVDAG 180
Query: 180 STDGTERYGLLDRNHKIKVEPQVL 203
+
Sbjct: 181 FFTSASDDTAIGTALNTVETALAS 204
Score = 64.8 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 52/140 (37%), Positives = 76/140 (54%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
N + + K K D+ + +I + ++ A+ ++ ++T +
Sbjct: 143 NVVASYNRSGNAVTVDKITVKATDTDAKTMVKDIVDAGFFTSASDDTAIGTALNTVETAL 202
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A +G+ S+I Q+ F+ ++D++EKGVG LVDADM ES RLSALQ QQQL
Sbjct: 203 ASLATGAATLGAAKSQIDSQKSFLSGLQDSIEKGVGTLVDADMNKESARLSALQVQQQLG 262
Query: 433 VQALSIVNNSTARILSLFRG 452
VQALSI N+S ILSLFRG
Sbjct: 263 VQALSIANSSNQSILSLFRG 282
>gi|157961178|ref|YP_001501212.1| flagellar hook-associated protein FlgL [Shewanella pealeana ATCC
700345]
gi|157846178|gb|ABV86677.1| flagellar hook-associated protein 3 [Shewanella pealeana ATCC
700345]
Length = 400
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/443 (10%), Positives = 116/443 (26%), Gaps = 53/443 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + + ++++SG +V+ A D+ + + + +
Sbjct: 3 ISTAQMFHQTSSNVLKGQSATSQILEQLASGKKVNTAGDDPIAAAGIDNLNQQSALTNQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+++ ++++ + A ++ ++ + G D ++I E+ +L
Sbjct: 63 LKNIDYASNRLAVSESKIGSAETLIQSMHEGMLRSVNGTLNDADRQAIADEMRSSLEELM 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +G + +T + D+G + DS
Sbjct: 123 SIANSKDESGNSLFAGFATDTTPFAFDNSGNVVYSGDSGVRDSIVASGITVGSNIAGDSI 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + V DAS +
Sbjct: 183 FMNAANAIGDYSVNYSASQTGSFTVESAKVTDASLPVVGDY------------------- 223
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + ++ + ++I +
Sbjct: 224 -------------------------------TFDFVDNGAGGLDLNVTDSSGGVDTIPNF 252
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
TV + T + I + + A ++ +
Sbjct: 253 DPSQPVTVDGIELQFKGTPVAGDTFSMSPETQSNIFDTLNSAISLLEDGAKLNSPQGQSE 312
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
M ++++ + + + + G+ + D K + + + L D D A T
Sbjct: 313 MAQLLNNVTSGQEQMAMSRSVAGNSLKSLESYTDTHKEEQLVNQSALSLLEDLDYAEAIT 372
Query: 421 RLSALQTQQQLAVQALSIVNNST 443
Q S V +++
Sbjct: 373 EFEKQQLALNAVSSVFSKVGSTS 395
>gi|153950229|ref|YP_001399645.1| flagellin [Yersinia pseudotuberculosis IP 31758]
gi|152961724|gb|ABS49185.1| flagellin [Yersinia pseudotuberculosis IP 31758]
Length = 397
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 3/143 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN SA +A L + R+S+G R++ ADNAA I M+
Sbjct: 3 LSIHTNASAKTAINSLSNAGLANAKSSQRLSTGFRINSPADNAAGLQITNRMEKFLNGAG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
I + + IA G+++++ ++ +K T D ++IQ E T+L +
Sbjct: 63 QAKQNIQESIAMLQIADGGLAESVKTLNAMKKLATQAANDTNSAADREAIQKEFTELGKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSS 141
L++ + +N E
Sbjct: 123 LQNALNNTEYNSEKLFADGGKMR 145
Score = 77.1 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 40/123 (32%)
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRI 389
+ S + +K E + I A +G+ +R+
Sbjct: 275 HTDADKASTDYANNNLVGGGVMNMRLADKDLAMEADKKLSEVIDAYGAFRATLGANQNRL 334
Query: 390 HLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
+ + M + +G + D D A E + + Q +V L N +T I +L
Sbjct: 335 QSSSNNLDNMISNTAQALGSIKDTDFADEMKNHAQSEMLMQSSVMMLKKANAATQLISTL 394
Query: 450 FRG 452
+G
Sbjct: 395 LQG 397
>gi|325923281|ref|ZP_08184954.1| flagellar hook-associated protein 3 [Xanthomonas gardneri ATCC
19865]
gi|325546208|gb|EGD17389.1| flagellar hook-associated protein 3 [Xanthomonas gardneri ATCC
19865]
Length = 401
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/451 (11%), Positives = 116/451 (25%), Gaps = 57/451 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ + + L ++ +++SG R+ A D+ A + A++
Sbjct: 5 ISTSMMYSQSVSSMTAKQSRLNQLEAQLASGQRLVTAKDDPVAAGTAVGLDRALAAITRF 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ +++ + + +++A D M+ + D K+I SE+T L+ +
Sbjct: 65 GENANNVKNRLGLQENVLAQAGDAMARVNELTIQANSSALGPDDRKAIASELTALRDSMV 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G S I + + D + D ++ +
Sbjct: 125 SLANSTDGTGRYLFGGTADGSAPFIKSNGGVVYNGDQTQRQVEVAPDTFVSDTLPGSEIF 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G +D + L T + + +
Sbjct: 185 MRIRTGDGNVDAHANSANTGTGLLLDFSRDASTGSWNGGSYSVQFTAANTYEVRDSTNAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ G + AA + + S + AS T D
Sbjct: 245 VSTGTYKDGEDITAAGVRMRISGAPAVGDSFQIGASTTKDVFSTIDDL------------ 292
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ LN
Sbjct: 293 ----------------------------------------VGALNSDTLTPPQKAAMINT 312
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ + I A G+ S I ++ ++ + + D D AS
Sbjct: 313 LQTSMRDISQASSKMIDARASGGAQLSAIDNANALLESNEVTLKTTLSSIRDLDYASAIG 372
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + Q A ++ + +L R
Sbjct: 373 QYQLEKASLQAAQTISQQ--MQSSSLFNLLR 401
>gi|225163590|ref|ZP_03725898.1| flagellin domain protein [Opitutaceae bacterium TAV2]
gi|224801792|gb|EEG20080.1| flagellin domain protein [Opitutaceae bacterium TAV2]
Length = 273
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 44/95 (46%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
L +S I T I+ + GS SR+ D + + +E R+VD D+A
Sbjct: 179 TSLGGFTDISSIATAIENVATLRAQNGSEQSRLGFASDVLTTNKANLEAANSRIVDVDVA 238
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
SEST+L+ T Q LS N+S+ LSL +
Sbjct: 239 SESTQLARWNTLVQAGTSMLSQANSSSQIALSLLQ 273
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 74/207 (35%), Gaps = 3/207 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN++A AS L N L+ +R+SSG ++ AD+A +++ + + A
Sbjct: 4 VINTNYAATIASNNLSASNAALQKSLNRLSSGSKIVSPADDAGGLAVSLKLSAAATRSGA 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQL 119
S I S ++ +S A DV++ I T + +D + E QLQ QL
Sbjct: 64 TSTNIANTVSYLETQDGVLSTAGDVLNRISELYTLYQDPTKSASDKANYDVEFNQLQLQL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + G+ + + + T + L
Sbjct: 124 TSLAAEKFNGVALFGSAGAGAVESVAVSEDGSQTVAITAKDLSATDVGIGGLITETSLGG 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDI 206
TD + ++ ++ + +
Sbjct: 184 FTDISSIATAIENVATLRAQNGSEQSR 210
>gi|153953774|ref|YP_001394539.1| FlaB [Clostridium kluyveri DSM 555]
gi|219854390|ref|YP_002471512.1| hypothetical protein CKR_1047 [Clostridium kluyveri NBRC 12016]
gi|146346655|gb|EDK33191.1| FlaB [Clostridium kluyveri DSM 555]
gi|219568114|dbj|BAH06098.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 280
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/269 (12%), Positives = 84/269 (31%), Gaps = 2/269 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N A++ + + R+SSG +V A DN ++ ++ G L +
Sbjct: 3 LNYNMPALTMNFIQKQALNRQSGNLLRISSGYKVITAKDNPGALVKSENIRMQIGGLQSA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG--VERGTDSKSIQSEITQLQSQLRD 121
+ + G S + A+ G+ + +++ ++ V D + IQ+EI + +
Sbjct: 63 TRNVQDGVSMLQSAEGGLQEITNMIQRVRQLTVQAGGVTSENDREIIQNEIDETLDGINS 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+A + FNG L + + S I + ++ L
Sbjct: 123 MANNTEFNGLKLLGKNKNLTMPVGGNSGESVIIPQIDLTDGSESVISELYKVKTAKGKDI 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
G + L+ L+ ++ + + L + + + +
Sbjct: 183 LGDDNSDALEAIDSSLNTVLSLRSQYGALENRFQSTYDNMQALTDSMTSADSSIRDSDIA 242
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
+ + + + +
Sbjct: 243 EEMMNYSKESIIVQSSTAMIVQANKLPQD 271
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 36/92 (39%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + ID+ + + + G++ +R D ++ + D++ + D+D+A E
Sbjct: 186 DNSDALEAIDSSLNTVLSLRSQYGALENRFQSTYDNMQALTDSMTSADSSIRDSDIAEEM 245
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q + + N +L + R
Sbjct: 246 MNYSKESIIVQSSTAMIVQANKLPQDVLEVLR 277
>gi|89214378|gb|ABD64501.1| flagellin [Bacillus thuringiensis]
Length = 219
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSSNGTNSNKNRHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+I Q
Sbjct: 121 IGHMINMTKHIPPSPTQHDIKIST 144
Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/218 (10%), Positives = 61/218 (27%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++ + T T + + + L
Sbjct: 62 RMRDLAVQSSNGTNSNKNRHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHMINMTKHIPPSPTQHDIKISTEQEARAAILKIEDALQSVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ + DADMA E + + ++A
Sbjct: 182 NLNNQSMALTDAASLIEDADMAQEMSDFLKFKLLTEVA 219
>gi|157056858|gb|ABV02444.1| flagellin A [Arcobacter skirrowii]
Length = 300
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/225 (21%), Positives = 96/225 (42%), Gaps = 3/225 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + N + +++SSGL+++ A+D+A+ +IA +++ +++
Sbjct: 3 INTNVSSLTAQEASTNTNKYISNSLEKLSSGLKINKASDDASGLAIADKLRTQVTSINQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ + IA M++ ++ TIK K+ +I ++T+L QL
Sbjct: 63 VANGNSAVALLQIADKSMAEQSTILDTIKAKLIQANTDTTSTAGRVAIAKDVTKLLDQLN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA+ +++NG L+ SSTA IAKS F ++ I T + + L +
Sbjct: 123 NIAKQTNYNGTALLQAAPDSSTAGIAKSEGLKFQIGESTSDIIETKTIQANVTGLELTTL 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
K V + S A+ + +
Sbjct: 183 KTAASTGANATLGADGKYTGTVFTKANASAGQAAIDKAITQLNGY 227
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 33/97 (34%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
K + ID I G IGS +++ + ++ + D D
Sbjct: 204 VFTKANASAGQAAIDKAITQLNGYRGDIGSTQNQVESAIRNLMTQSTNIKAAESVIRDVD 263
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A ES + L Q A+S N + +L L +
Sbjct: 264 YAQESANFNKLNIISQAGSYAISQANATQQNVLRLLQ 300
>gi|89214200|gb|ABD64412.1| flagellin [Bacillus thuringiensis serovar mexicanensis]
Length = 219
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 19/152 (12%), Positives = 49/152 (32%), Gaps = 3/152 (1%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNDEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ +E L Q+ I+ + FN + T
Sbjct: 61 QRMRDLAVQSTNGTNSNKNRDSLNTEFQSLTEQIGYISETTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ Q + +
Sbjct: 121 ISHTVHMTKHIPPSPTQHNIKISTEQEASAAI 152
Score = 67.8 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 65/218 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNDEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T T + + + L
Sbjct: 62 RMRDLAVQSTNGTNSNKNRDSLNTEFQSLTEQIGYISETTEFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + + I+ ++ + +GSI +R+ +
Sbjct: 122 SHTVHMTKHIPPSPTQHNIKISTEQEASAAILKIEEALQNVSLHRADLGSIINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ V ++ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAVSQVEDADMAQEISDFLKFRLLTEVA 219
>gi|253682519|ref|ZP_04863316.1| flagellin [Clostridium botulinum D str. 1873]
gi|253562231|gb|EES91683.1| flagellin [Clostridium botulinum D str. 1873]
Length = 268
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 45/135 (33%), Gaps = 3/135 (2%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
+N + KL E SSG R++ AAD+AA I + K LS
Sbjct: 4 SNALVLGTFSKLNKNIKRSERCNAMASSGKRINKAADDAAGLGICESFKVQVRGLSQGER 63
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDI 122
G S + M + ++ D + Q E Q++ ++ +
Sbjct: 64 NTQEGLSLLQCVDGHMEGIQKDLQRMREMAIENATDTRSDEDREKAQKEFNQIKENIKYV 123
Query: 123 ARGSSFNGENWLRTD 137
+ + FN D
Sbjct: 124 SENAEFNKIKLFDKD 138
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 34/96 (35%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ A + ++ ID I + IGS SR+ + K + + R+ D D
Sbjct: 172 VLTRDAASKAITSIDDAILKCVSQRVDIGSDMSRLETALNDGKNTNSSTTASLSRIEDID 231
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA+ + L + + N T + L
Sbjct: 232 MATAAMNLFKSDVLVKYTNAMVCHANQDTNNTMKLL 267
>gi|182412269|ref|YP_001817335.1| flagellin domain-containing protein [Opitutus terrae PB90-1]
gi|177839483|gb|ACB73735.1| flagellin domain protein [Opitutus terrae PB90-1]
Length = 271
Score = 89.4 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/209 (15%), Positives = 64/209 (30%), Gaps = 3/209 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN++A AS L N +L+ +R+SSG ++ AD+A +++ + + A
Sbjct: 4 VINTNYAATVASNNLAASNASLQKSLNRLSSGSKIVSPADDAGGLAVSMKLSAAAIRQGA 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQL 119
V+ I S + + V+ I + +D + +E L +QL
Sbjct: 64 VATNISNAISFLQTQDGALKVTAKVLERISELKVLYTDVTKSSSDKANYDAEFVALTAQL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
R A + D+G + + + T L
Sbjct: 124 RSTALEKFNGVTMFGSADIGQVDVTEDGGTQVTIASRNLLDNTSGVGTIADSTVTSLGGV 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ + +
Sbjct: 184 QLTDISTAIQNVATMRANNGSEQSRFNFA 212
Score = 83.6 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 51/138 (36%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + +D +D ++ + N + ++ I T I+
Sbjct: 134 VTMFGSADIGQVDVTEDGGTQVTIASRNLLDNTSGVGTIADSTVTSLGGVQLTDISTAIQ 193
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
GS SR + + + + + +E R+VD D+A+EST+L+ Q
Sbjct: 194 NVATMRANNGSEQSRFNFASELVIVNKSNLESANSRIVDVDVATESTQLARWNVLVQAGT 253
Query: 434 QALSIVNNSTARILSLFR 451
LS N S+ L L +
Sbjct: 254 SMLSQANTSSQTALKLLQ 271
>gi|302871569|ref|YP_003840205.1| flagellar hook-associated protein 3 [Caldicellulosiruptor
obsidiansis OB47]
gi|302574428|gb|ADL42219.1| flagellar hook-associated protein 3 [Caldicellulosiruptor
obsidiansis OB47]
Length = 315
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 21/226 (9%), Positives = 71/226 (31%), Gaps = 3/226 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + L L+ +Q +++ G ++ +D+ + + +++D + +
Sbjct: 3 ITNNMMVNNFLINLNKNLKRLDDIQYKMAIGKKIRYPSDDPVITARSLRLRTDVSEIEQL 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ S VD ++ ++ + + ++ G D I E+ Q++ +
Sbjct: 63 QKNVDDAVSWVDTTESALADINESLQRVRELAVRGANGTNTKEDMAQIAKEVAQIKQHII 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + + ++ + S + +G I + L+ ++
Sbjct: 123 QVGNTNYAGRYIFSGFKTDTAPINSDGSFSDTGDFSSSGGYSIDLSTGNNIIQFELMKAN 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + + + V + + + +
Sbjct: 183 YININKTANQVFYIQGETDENKGNLFKVLDNLINALQNGDATTVNS 228
Score = 54.7 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 34/82 (41%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + ++S ID I A G +G++ +R+ L ++ + + D DMA
Sbjct: 222 DATTVNSLLSDIDRHIDNVVAQRGDVGALQNRLELIKNRLSDDNVNFTTLLSNNEDVDMA 281
Query: 417 SESTRLSALQTQQQLAVQALSI 438
+L + + A+Q +
Sbjct: 282 EIIMQLKTAENVYRAALQTGAQ 303
>gi|326389603|ref|ZP_08211169.1| flagellar hook-associated protein 3 [Thermoanaerobacter ethanolicus
JW 200]
gi|325994318|gb|EGD52744.1| flagellar hook-associated protein 3 [Thermoanaerobacter ethanolicus
JW 200]
Length = 297
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 55/154 (35%), Gaps = 3/154 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + + L+ Q+ +S+G R+S +D+ + + +++D A
Sbjct: 3 ITDNMLITNFLNNYNNNLERLQKNQNMLSTGKRISRPSDDPVAVATSLRIRTDMTRNDAY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQ---SEITQLQSQLR 120
+ S +DI +S+ D++ + G +Q +EI QL++Q+
Sbjct: 63 TKNADDAKSWLDITDTALSQLNDLLQRTRELAVEGSNGTLTQTDMQKIANEIEQLKAQMI 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
+ + + S K+
Sbjct: 123 QVGNTQYNGRYIFAGFKTTTQPFSETKNSYSGDN 156
Score = 51.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/196 (10%), Positives = 59/196 (30%)
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + +A + + G TT +
Sbjct: 88 QRTRELAVEGSNGTLTQTDMQKIANEIEQLKAQMIQVGNTQYNGRYIFAGFKTTTQPFSE 147
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + + +G S + + + N +
Sbjct: 148 TKNSYSGDNGVIEFEVGAGGNKIAVNVTGDKVFNVDSTGISQLLTVMDKLKNALDSGDHQ 207
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A+ +++ +D Q++ A +G+ S+R+ L ++ ++ + + D D+A
Sbjct: 208 AVSNLIADVDKQLENVLAVRADVGAKSNRLDLIQNRLQDDNYNFTALLSKNEDVDLAQVI 267
Query: 420 TRLSALQTQQQLAVQA 435
T L + + ++ A
Sbjct: 268 TNLQMDENVYRASLAA 283
>gi|254522599|ref|ZP_05134654.1| flagellar hook-associated protein 3 [Stenotrophomonas sp. SKA14]
gi|219720190|gb|EED38715.1| flagellar hook-associated protein 3 [Stenotrophomonas sp. SKA14]
Length = 400
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/442 (9%), Positives = 109/442 (24%), Gaps = 57/442 (12%)
Query: 1 MTS-ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M+S I T+ + + L ++ ++++G ++ A D+ A + A
Sbjct: 1 MSSRISTSMMFNQSVSLMMAKQAKLSHLEQQIATGSKIVSAKDDPVAAGAAVGLDRSLAA 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQ 116
L + G +++ + + +++ D+M+ + + D K++ +E+ Q++
Sbjct: 61 LDRMKLNAGNVQNRLGVQENTLAQVNDLMARVNDLTIQASNPALSAPDKKTLITELNQIR 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
L +A G + + D + D Y+
Sbjct: 121 DGLLSLANADDGTGRYVFGGTNDGDPPFAKINGKVVYRGDQTQRQIEVGPDTYVRDALPG 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+ G +D +
Sbjct: 181 SEIFMRIPTGDGFVDGGAAAGNTGNGVLTNITR--------------------------- 213
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
G+ + + T T
Sbjct: 214 --------------------------DGSDSWNGQAFSIRFTAADQYQVLDGAGNVTGTG 247
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
++ T +S + + L+
Sbjct: 248 TYKAGDNVEVNGVRLQITGAPAAGDSFNVTPASSRDIFDTMDKLIAALDADTGTTAKMSA 307
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ ++ + + + + G+ + D + ++ + ++ D D A
Sbjct: 308 QQNELQSALRDVARASERMIDSRAAGGAQLKALDNAADMREANGVTLKTTLSQMRDLDYA 367
Query: 417 SESTRLSALQTQQQLAVQALSI 438
++ T Q A S
Sbjct: 368 DALSQYQLQSTALQAAQTIFSQ 389
>gi|89214236|gb|ABD64430.1| flagellin [Bacillus thuringiensis serovar fukuokaensis]
Length = 218
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 44/138 (31%), Gaps = 3/138 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ ++SG +++ A+DN A +I M + S + A+A + +++
Sbjct: 1 EHLASGKKLNHASDNPANVAIVTRMHGRESGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQI 163
I +
Sbjct: 121 IGHTINMKHIPPSPTQHD 138
Score = 73.6 bits (178), Expect = 7e-11, Method: Composition-based stats.
Identities = 22/217 (10%), Positives = 71/217 (32%)
Query: 216 TISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAA 275
+++ K + A + + + + T+ + ++
Sbjct: 2 HLASGKKLNHASDNPANVAIVTRMHGRESGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
+ + +++ ++S+ + + +G T + D +R +I
Sbjct: 62 RMRDLAVQSANGTNSNKNRHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDDI 121
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
+M + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTINMKHIPPSPTQHDIKILTEQEARAAIRKIEEALQSVSLHRADLGAMINRLQFNIEN 181
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 LNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 218
>gi|153001465|ref|YP_001367146.1| flagellar hook-associated protein FlgL [Shewanella baltica OS185]
gi|151366083|gb|ABS09083.1| flagellar hook-associated protein 3 [Shewanella baltica OS185]
Length = 403
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/420 (9%), Positives = 99/420 (23%), Gaps = 50/420 (11%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
+ D++SSG +V+ A D+ + N + I ++++ + ++
Sbjct: 20 QTATSKILDQLSSGKKVNTAGDDPVASQGIDNLNQKNALVDQFMKNIDYATNRLAVTESK 79
Query: 81 MSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+ A D+ +++ + G GT+ + I E+ +L IA +G
Sbjct: 80 LGSAEDLTGSMREQVMRAINGTLSGTERQMIADEMKGSLEELLSIANSKDESGNYMFSGF 139
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ I ++ + + + L
Sbjct: 140 STDKEPFAFDNSTPPKIVYSGDSGVRNSLVQTGVAMGTNIPGDSAFMKAPNGLGDYSVNY 199
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ Q + + A + N + V A
Sbjct: 200 LASQQGEFSVKTAKIADAATYVADTYTFNFTDNGAGGTNLQVLDSANNPVANVANFDATN 259
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ +
Sbjct: 260 PVSFNG-----------------------------------------------IDVKIDG 272
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
+ I S I + + + + ++++ +D+ + ++
Sbjct: 273 KPGAGDSFTMEPQAEVSIFDTISSAIALIEDPNSANTPQGRAQLAQILNNVDSGVNQISS 332
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
A G+ + + + + L D D AS T Q S
Sbjct: 333 ARSVAGNNLKVVESYTETHTEEKVVNTSALSLLEDLDYASAITEFEKQQLALNAVSNVFS 392
>gi|89214216|gb|ABD64420.1| flagellin [Bacillus thuringiensis serovar colmeri]
Length = 219
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 42/110 (38%), Gaps = 3/110 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNTASDNPANVAIVTRMHARASGMRVAIRNNEDALSMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+++ + S+ E L Q+ I + FN +
Sbjct: 61 QRMRDLAVQSSNGTNSNKNRHSLNKEFQSLTEQIGYIGETTKFNDLSVFD 110
Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 65/218 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNTASDNPANVAIVTRMHARASGMRVAIRNNEDALSMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++ + T T + + + L
Sbjct: 62 RMRDLAVQSSNGTNSNKNRHSLNKEFQSLTEQIGYIGETTKFNDLSVFDVPNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + ++ + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVHISKSIPPSPTQHDIKISTEQEARAAIRKIEEALQSVSIHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNNQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|89214288|gb|ABD64456.1| flagellin [Bacillus thuringiensis serovar coreanensis]
Length = 219
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSSNGTNSNKNRHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IGHTINMTKHIPPSPTQHDIKIST 144
Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/218 (10%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++ + T T + + + L
Sbjct: 62 RMRDLAVQSSNGTNSNKNRHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTINMTKHIPPSPTQHDIKISTEQEARAAIRKIEEALQSVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ + DADMA E + + ++A
Sbjct: 182 NLNNQSMALTDAASLIEDADMAQEMSDFLKFKLLTEVA 219
>gi|73666355|gb|AAZ79854.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Mbandaka]
gi|73666357|gb|AAZ79855.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Mbandaka]
gi|73666359|gb|AAZ79856.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Mbandaka]
gi|73666361|gb|AAZ79857.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Braenderup]
gi|73666363|gb|AAZ79858.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Braenderup]
gi|73666365|gb|AAZ79859.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Braenderup]
gi|73666391|gb|AAZ79872.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Brandenburg]
gi|73666393|gb|AAZ79873.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Brandenburg]
gi|73666395|gb|AAZ79874.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Brandenburg]
gi|73666429|gb|AAZ79891.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Brandenburg]
Length = 176
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 3/174 (1%)
Query: 32 SSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTI 91
SSGLR++ A D+AA +IA ++ L+ S G S + +++ + + +
Sbjct: 1 SSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQRV 60
Query: 92 KNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
+ SIQ+EITQ +++ ++ + FNG L D + A
Sbjct: 61 RELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGAND 120
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
I Q +D + + ++ + Y + ++
Sbjct: 121 GETIDIDLKQINSQTLGLDSLNVQKAYDVSATDVISSTYSDGTQALTAPTATEI 174
>gi|87242384|gb|ABD33731.1| flagellin [Bacillus thuringiensis serovar pakistani]
Length = 236
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 74/205 (36%), Gaps = 3/205 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ +R+SSG ++ AAD+AA +IA M++ G L+ + S + A +
Sbjct: 1 DKMNTAMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVGARNTQDAMSALRTGDAAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+++ +++ T D+ S+ E QL+ ++ IA ++FNG +L
Sbjct: 61 GSISNILLRMRDLATQAASGTNNAKDTASLNKEYEQLKGEIDHIAGKTNFNGNAFLDKAD 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
++ + D I T + L D + TE + +
Sbjct: 121 PTNPGKDITIQLSDAANDTLVIEAIDTKALTSGTLSTLADVAGATTEMGKIDTAIQAVAD 180
Query: 199 EPQVLKDIDVSVYDASGTISTKKFK 223
+ ++++
Sbjct: 181 ARATFGSQLNRLDHNLNNVTSQATN 205
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 18/168 (10%), Positives = 41/168 (24%)
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL 325
+ AAS T + + + +
Sbjct: 69 RMRDLATQAASGTNNAKDTASLNKEYEQLKGEIDHIAGKTNFNGNAFLDKADPTNPGKDI 128
Query: 326 DSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
+ + + + IDT I+ A GS
Sbjct: 129 TIQLSDAANDTLVIEAIDTKALTSGTLSTLADVAGATTEMGKIDTAIQAVADARATFGSQ 188
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+R+ + + + ++ DADMA E + ++ + + +
Sbjct: 189 LNRLDHNLNNVTSQATNMASAASQIEDADMAKEMSEMTKFKILNEAGI 236
>gi|188592124|ref|YP_001796722.1| flagellar hook-associated protein flgl [Cupriavidus taiwanensis LMG
19424]
gi|170938498|emb|CAP63485.1| Flagellin, N-terminal. bacterial flagellin family [Cupriavidus
taiwanensis LMG 19424]
Length = 409
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/428 (9%), Positives = 86/428 (20%), Gaps = 44/428 (10%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ L +Q ++ +G + +D+ + A + + + +
Sbjct: 13 LASMNYQQGALMHIQQQLGTGRSILTPSDDPVGATRALGVSQAQAVNGQYATSRNQANIA 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNG 130
+ + + + I + D S+ + + L +QL +A NG
Sbjct: 73 LAAEENALDSVTTITQNIHTLLVQAGNGTMSDADRGSLATALEGLYNQLLSLANSDDGNG 132
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+ S + +
Sbjct: 133 QFLFGGTRSGSAPFT---------------------QSAGASTYIGDNGQQLLQVDVARQ 171
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
E + +T T S
Sbjct: 172 MPAGNTGREVFMSVTGGAGYVVKGNPANTGTATFGTVSTTDPSHPLYGHALQMSFTANAA 231
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
+T T +
Sbjct: 232 GQMEYTITDTSTGATPAPVVA--------------------GPVIYNSPAHVDVAGFSFN 271
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
V DT + S + + TL A+ D N + +
Sbjct: 272 VTGNPKAGDTLTMQPASEAGTDMFANLQTVIDTLRQPTAADNDRANLGNVLSTAMRQFSN 331
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ +GS + + +D + + L D D A T Q Q
Sbjct: 332 SLDNVLTVRASVGSRMNELDALDDVGTNRDLTYSQTLSGLQDLDYAKAITEYYQRQVALQ 391
Query: 431 LAVQALSI 438
A Q+
Sbjct: 392 GAQQSFMQ 399
>gi|157056859|gb|ABV02445.1| flagellin B [Arcobacter skirrowii]
Length = 302
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/255 (18%), Positives = 103/255 (40%), Gaps = 3/255 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + N +++ +++S+GL+++ A+D+A+ +IA +++ +++
Sbjct: 3 INTNVSSLTAQEAATNTNNSIKNSLEKLSTGLKINKASDDASGLAIADKLRTQVTSINQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ + IA M++ ++ TIK K+ +I ++ +L QL
Sbjct: 63 IANGNSAVALLQIADKSMAEQSTILDTIKAKLIQANTSTTSTAGRVAIAKDVNKLLDQLN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA +++NG L+ +G++ AS + SF ++ I+T + + LD+
Sbjct: 123 NIANQTNYNGTALLQAGMGTAAASKNATEGLSFQIGESTSDMISTNTIQSNITGLSLDTL 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
L + + I +L G N
Sbjct: 183 KSNVSAGALYNATPGFTQVAGAVAFTREMASGGQRLIDNAITQLNGYRGDIGSTQNQVES 242
Query: 241 QAKGIATIPVPLPAA 255
+ + T + A
Sbjct: 243 AIRNLMTQATNIKNA 257
Score = 77.5 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/207 (14%), Positives = 52/207 (25%)
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
A A A + ++A Y + + ++
Sbjct: 96 QANTSTTSTAGRVAIAKDVNKLLDQLNNIANQTNYNGTALLQAGMGTAAASKNATEGLSF 155
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
+ + T S L + +G +
Sbjct: 156 QIGESTSDMISTNTIQSNITGLSLDTLKSNVSAGALYNATPGFTQVAGAVAFTREMASGG 215
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
ID I G IGS +++ + ++ L D D A ES +
Sbjct: 216 QRLIDNAITQLNGYRGDIGSTQNQVESAIRNLMTQATNIKNAESVLRDVDYAQESANFNK 275
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
L Q A+S N + +L L +
Sbjct: 276 LNIISQAGSYAISQSNAVSQNVLRLLQ 302
>gi|256015906|ref|YP_003105915.1| flagellin [Brucella microti CCM 4915]
gi|255998566|gb|ACU50253.1| flagellin [Brucella microti CCM 4915]
Length = 282
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 1/204 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SILTN SA++A Q L N +LE Q+R+S+GLR+S+A+DNA+YWSIA MKSDN A
Sbjct: 1 MASILTNSSALTALQTLASTNKSLESTQNRISTGLRISEASDNASYWSIATSMKSDNKAN 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE-RGTDSKSIQSEITQLQSQL 119
SAV DA+GLG+ KVD A + ++K + + IK K+ + + D I++EI + + +
Sbjct: 61 SAVQDALGLGAGKVDTAYSAINKIRESVDDIKTKLVSAMGASTEDKGKIETEIKSIVANI 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+++ G N L + + G+ + D V+ T D + ++
Sbjct: 121 NSALSNANYAGSNLLNGPTTDLNVVASYNRSGNAVTVDKITVKATDTDAKTMVKDIVDAG 180
Query: 180 STDGTERYGLLDRNHKIKVEPQVL 203
+
Sbjct: 181 FFTSASDDTAIGTALNTVETALAS 204
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/140 (36%), Positives = 75/140 (53%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
N + + K K D+ + +I + ++ A+ ++ ++T +
Sbjct: 143 NVVASYNRSGNAVTVDKITVKATDTDAKTMVKDIVDAGFFTSASDDTAIGTALNTVETAL 202
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A + + S+I Q+ F+ ++D++EKGVG LVDADM ES RLSALQ QQQL
Sbjct: 203 ASLATGAATLSAAKSQIDSQKSFLSGLQDSIEKGVGTLVDADMNKESARLSALQVQQQLG 262
Query: 433 VQALSIVNNSTARILSLFRG 452
VQALSI N+S ILSLFRG
Sbjct: 263 VQALSIANSSNQSILSLFRG 282
>gi|118443562|ref|YP_877970.1| flagellin [Clostridium novyi NT]
gi|118134018|gb|ABK61062.1| flagellin [Clostridium novyi NT]
Length = 268
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 47/137 (34%), Gaps = 4/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + KL E SSG R++ AAD+AA +I + K+ LS
Sbjct: 3 IN-NALVLGTFSKLNSNIKKSEKCNATASSGKRINKAADDAAGLTICESFKAQVRGLSQG 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
G S + M + ++ D + Q E Q++ ++
Sbjct: 62 ERNTQEGLSLLQCVDGHMEGIQKDLQRMREMAIENATDTRTDEDREKAQKEFNQIKENIK 121
Query: 121 DIARGSSFNGENWLRTD 137
++ + FN D
Sbjct: 122 YVSESAEFNKIKLFDKD 138
Score = 74.4 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 32/97 (32%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
K A + ID I + +G+ SR+ + K + + R+ D
Sbjct: 171 NVLTKEASSNAIKSIDNAIAKCISERVDVGTAMSRLESALNDTKNTNSSTTASLSRIEDV 230
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
DMA+ + L + + N T + L
Sbjct: 231 DMANAAMNLFKSDVLVKYTNAMVCHANQDTNNTMKLL 267
>gi|329850848|ref|ZP_08265693.1| flagellin fljK [Asticcacaulis biprosthecum C19]
gi|328841163|gb|EGF90734.1| flagellin fljK [Asticcacaulis biprosthecum C19]
Length = 276
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 3/161 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN AM A Q L + L Q R+S+GL+V+ A D+ A ++IAQ ++ +L
Sbjct: 3 LSINTNTGAMVALQNLNSTSSQLAATQTRISTGLKVATAKDDGAAYAIAQSQRASVASLD 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQSQ 118
AV D++ +S +D+A + D+++ +K K A + T ++ S+ ++ Q
Sbjct: 63 AVKDSLNRATSSIDVAMSAGEGISDMLTQLKEKALAASDTSLDTTSRDALASDFESIRDQ 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
+ + FNG N + + A + D
Sbjct: 123 ITKTISNAEFNGINLIDGSITGIGALANADGSSTLTVDTEN 163
Score = 84.0 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/88 (48%), Positives = 58/88 (65%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+S +D I +AA ++G+ S + FI ++D++E G+G LVDADMA ES +L A
Sbjct: 189 LSTLDDSISNVSAALARMGTDSKAVTAHMTFIGKLQDSLEAGIGNLVDADMAKESAKLQA 248
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFRG 452
LQT+QQL VQALSI N + LSLFRG
Sbjct: 249 LQTKQQLGVQALSIANQAPQTALSLFRG 276
>gi|296283231|ref|ZP_06861229.1| flagellin domain-containing protein [Citromicrobium bathyomarinum
JL354]
Length = 275
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 3/182 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN AM+A Q L N L VQ R+++GL V+ D++A ++IAQ ++ D G LSA
Sbjct: 4 SVNTNTGAMAALQSLNQTNRGLSQVQSRINTGLNVASTKDDSASFTIAQSLRGDVGGLSA 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQL 119
V+ ++ G S VD+A AG + DV++ +K K + G +I ++ T L+ Q+
Sbjct: 64 VNSSLNRGKSTVDVAIAGAEQISDVLNQMKAKAIQASDDGLDAESRTAINADYTALKEQI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I S FNG N L+ D S+ A + + T + +
Sbjct: 124 TTIIASSEFNGTNVLKDDATSTGKVSALQSLDTTSTIGVANQAFDTNVTTALGTGLGTKA 183
Query: 180 ST 181
Sbjct: 184 DA 185
Score = 80.2 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 73/203 (35%)
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
A A + + K+ ++ AS + + T +S
Sbjct: 73 STVDVAIAGAEQISDVLNQMKAKAIQASDDGLDAESRTAINADYTALKEQITTIIASSEF 132
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ + + A K + ++ I
Sbjct: 133 NGTNVLKDDATSTGKVSALQSLDTTSTIGVANQAFDTNVTTALGTGLGTKADADTALTEI 192
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
T T+ +GS S +I Q F + D +E G+G LVDAD+A ES +L ALQ +
Sbjct: 193 ATVTATVTSTLSTLGSASRKIEGQLSFNSKLSDVIESGIGNLVDADLAKESAKLQALQVK 252
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQL VQALSI N + I SLFR
Sbjct: 253 QQLGVQALSIANQAPQTITSLFR 275
>gi|182412270|ref|YP_001817336.1| flagellin domain-containing protein [Opitutus terrae PB90-1]
gi|177839484|gb|ACB73736.1| flagellin domain protein [Opitutus terrae PB90-1]
Length = 273
Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 73/210 (34%), Gaps = 3/210 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN++A AS L N L+ +R+SSG ++ + +D+A +++ + + A
Sbjct: 4 VINTNYAATVASNNLAASNTMLQKSLNRLSSGSKIVNPSDDAGGLAVSMKLSAAAVRQGA 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQL 119
V+ IG S + + A V+ I + +D + +E LQ+QL
Sbjct: 64 VATNIGNAVSLLQTQDGALKIAAKVLERISELKVLHSDVTKSSSDKANYDAEFNALQTQL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
RDIA + D+GS + + + L D+
Sbjct: 124 RDIATEEFNGVALFGSADIGSVQITEDGGTSVAIAARNLTDATDGVGTISASTVDSLGDA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ + ++ +
Sbjct: 184 AVSLANISTAIQNVATMRATNGSEQSRFNF 213
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 46/136 (33%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
D S + I + + + + ++ I T I+
Sbjct: 138 GSADIGSVQITEDGGTSVAIAARNLTDATDGVGTISASTVDSLGDAAVSLANISTAIQNV 197
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
GS SR + + + + + +E R+VD D+A+EST+L+
Sbjct: 198 ATMRATNGSEQSRFNFASELVTVNKANLEAANSRIVDVDVATESTQLARWNVLVSAGTSM 257
Query: 436 LSIVNNSTARILSLFR 451
L+ N S L L +
Sbjct: 258 LAQANTSAQTALRLLQ 273
>gi|163760560|ref|ZP_02167641.1| flagellin C protein [Hoeflea phototrophica DFL-43]
gi|162282175|gb|EDQ32465.1| flagellin C protein [Hoeflea phototrophica DFL-43]
Length = 267
Score = 89.0 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 59/97 (60%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + AA +G++ +RI +Q +F+ + ++++ G+GRLVDAD
Sbjct: 171 AMTTDQLLLQIQATELASIELIDAAAGMGALKNRIDMQTEFVANLIESIDAGIGRLVDAD 230
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
M ESTRL ALQ Q+QL +QALSI N+S+ L+LFR
Sbjct: 231 MNKESTRLKALQAQEQLGIQALSIANSSSQSFLTLFR 267
Score = 46.3 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 76/176 (43%)
Query: 53 MKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEI 112
M+S+N LS V+D +GLG++ VD+ M +I ++ IKNK+ A +E G D +Q +I
Sbjct: 1 MRSENKVLSTVNDGLGLGAAMVDVTYTAMDASIGIVDEIKNKMLAALEPGVDRNKLQLDI 60
Query: 113 TQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
QLQ Q+ IA+ +SF+GENWL +LG +T S V T
Sbjct: 61 DQLQEQIISIAKSASFSGENWLYHELGKNTPSQKSIVGSVNRDASGNLKMTTLNVDTEFT 120
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
V L + N + ++ + A G I + T
Sbjct: 121 SLVKLGFGGPVATSGNGILSNIRTNIDYTDSSGATATGTAAGGVIDFDLTAMTTDQ 176
>gi|221069315|ref|ZP_03545420.1| flagellar hook-associated protein 3 [Comamonas testosteroni KF-1]
gi|220714338|gb|EED69706.1| flagellar hook-associated protein 3 [Comamonas testosteroni KF-1]
Length = 404
Score = 89.0 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/435 (10%), Positives = 103/435 (23%), Gaps = 47/435 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + S L +L + ++ ++G RV A+D+ + A+ ++
Sbjct: 6 IGTANMYDSTINNLGSRQSSLVDLMEKTTAGKRVLRASDDPVAAAQAERARTRITRSEND 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+G + ++ + KA + ++ + D + + + Q++S I
Sbjct: 66 QRVLGAQRDVIAQGESELGKAHSALQDFRDLVVQAGNGSYDQVARDALVQQMESLREQI- 124
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
G + G S G + L S
Sbjct: 125 -----LGYANAKDSNGLPIFRGLGSPDTPLQSTPPGSSSQLNPGQNTGSDNGLPISLDGH 179
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ N V S T ++ + T
Sbjct: 180 AAWLNVPTGNGVFVVNGAASNSGKAWADVGSVTDPSQVTGDSYTLVFTKDPTTGEISYEI 239
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
++ P A +
Sbjct: 240 NSSSATATNPVVAA-----------------------------------------TPYKE 258
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + + + +
Sbjct: 259 GQAITVGGQQISIKGTPADGDSFTMSPSTRTDIFSVLDQAIATVKGGTGGSTALQQGLGR 318
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+S +D+ + A G R E +K E R D DM + +++
Sbjct: 319 ALSELDSGMNRVQAMRSYAGDQLKRADSLESDMKDQALTQEGARSRAEDIDMITALSQVE 378
Query: 424 ALQTQQQLAVQALSI 438
+ Q A+Q+ +
Sbjct: 379 TQKVGLQAALQSYAQ 393
>gi|89214376|gb|ABD64500.1| flagellin [Bacillus weihenstephanensis]
Length = 219
Score = 89.0 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 44/144 (30%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ + +G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLVTGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I+ + FN T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYISETTEFNDLPVFDGQSRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNLTKHIPPSPTQHDIKIST 144
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 61/218 (27%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
++ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLVTGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYISETTEFNDLPVFDGQSRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNLTKHIPPSPTQHDIKISTEQEARTAIRKIEEALQNLSLHRADLGAMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|89214338|gb|ABD64481.1| flagellin [Bacillus thuringiensis serovar morrisoni]
Length = 219
Score = 89.0 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANAAIVTRMYARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IGHTINMTKHIPPSPTQHDIKIST 144
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANAAIVTRMYARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +GS+ +R+ +
Sbjct: 122 GHTINMTKHIPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGSMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDTASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|89214218|gb|ABD64421.1| flagellin [Bacillus thuringiensis serovar entomocidus]
Length = 219
Score = 89.0 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 19/152 (12%), Positives = 49/152 (32%), Gaps = 3/152 (1%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ +E L Q+ I+ + FN + T
Sbjct: 61 QRMRDLAVQSTNGTNSNKNRDSLNTEFQSLTEQIGYISETTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ Q + +
Sbjct: 121 ISHTVHMTKHIPPSPTQHDIKISTEQEASAAI 152
Score = 66.7 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 65/218 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T T + + + L
Sbjct: 62 RMRDLAVQSTNGTNSNKNRDSLNTEFQSLTEQIGYISETTEFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + + I+ ++ + +GS+ +R+ +
Sbjct: 122 SHTVHMTKHIPPSPTQHDIKISTEQEASAAILKIEEALQNVSLHRADLGSMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ V ++ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAVSQVEDADMAQEISDFLKFRLLTEVA 219
>gi|238025311|ref|YP_002909543.1| flagellin [Burkholderia glumae BGR1]
gi|37360922|dbj|BAC98370.1| flagellin [Burkholderia glumae]
gi|237879976|gb|ACR32308.1| Flagellin [Burkholderia glumae BGR1]
Length = 384
Score = 89.0 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 50/297 (16%), Positives = 93/297 (31%), Gaps = 3/297 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 1 MLGINTNVNSLVAQQNLNGSQSALSQAITRLSSGNRINSAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ S + + +S + I T +D + + E+ Q
Sbjct: 61 NQGVQNTNDAVSLIQTTSSQLSSLTSSLQRISTLATQAATGTLSSSDQAAAEKEVAQQIQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA ++FNG+N L G T I +V + D + + I L +
Sbjct: 121 EVNRIAAQTNFNGKNLLDGSAGIVTFQIGANVGQTVSLDLSQSLSAAKIGGGLVQSGTNV 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + + V D + + + A
Sbjct: 181 GTIQNLSLDANGAATTAAQPAITSVNVLSDGKGGFTFTDQNGQTLSTTAVGAIFTTGTAA 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A T+ + ++ + + + + N A
Sbjct: 241 GTGTAVTNLTLATGATSGMTTAQASAAANMISQINSVNAPPTVSNVNISNATSANQA 297
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/293 (9%), Positives = 81/293 (27%)
Query: 159 GKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+ L + + + + L D + +
Sbjct: 92 STLATQAATGTLSSSDQAAAEKEVAQQIQEVNRIAAQTNFNGKNLLDGSAGIVTFQIGAN 151
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
+ S + A G + + A T+ + + S
Sbjct: 152 VGQTVSLDLSQSLSAAKIGGGLVQSGTNVGTIQNLSLDANGAATTAAQPAITSVNVLSDG 211
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
+D + + ++ + + T+ + T +T+ + +
Sbjct: 212 KGGFTFTDQNGQTLSTTAVGAIFTTGTAAGTGTAVTNLTLATGATSGMTTAQASAAANMI 271
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ ++N + + + + + + + +G+ +R+ +
Sbjct: 272 SQINSVNAPPTVSNVNISNATSANQAIVSVANALSTINNLQATLGATQNRLQGIAQTQQA 331
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ AD A E+ LS Q QQ + L+ N+ ++L L +
Sbjct: 332 NSTNLSSAQSQIQSADFAQETAALSKAQVLQQAGISVLAQANSLPQQVLKLLQ 384
>gi|89214206|gb|ABD64415.1| flagellin [Bacillus thuringiensis serovar cameroun]
Length = 219
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 19/146 (13%), Positives = 46/146 (31%), Gaps = 3/146 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANDTNSNKNRDSLNKEFQSLTEQIGYIGATTEFNDLFVCDGQIRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLD 171
+ Q +
Sbjct: 121 IGHTVHMTNHIPPSPTQHDIKISTVQ 146
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 61/218 (27%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+D + T T + L
Sbjct: 62 RMRDLAVQSANDTNSNKNRDSLNKEFQSLTEQIGYIGATTEFNDLFVCDGQIRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVHMTNHIPPSPTQHDIKISTVQEARAAIRKIEEALQNVSLHRADLGAMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDASSRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|89214240|gb|ABD64432.1| flagellin [Bacillus thuringiensis serovar neoleonensis]
Length = 219
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLTTGKKLNNASDNPANVAIVTRMHARASGMRVAIRNNENALSMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQISYIGETTEFNNLPVFGDQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNLTKHIPPSPTQHDIKIST 144
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLTTGKKLNNASDNPANVAIVTRMHARASGMRVAIRNNENALSMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQISYIGETTEFNNLPVFGDQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+H +
Sbjct: 122 GHTVNLTKHIPPSPTQHDIKISTEQEARTAIRKIEEALQNVSLHRADLGAMINRLHFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALADASPRIEDADMAQEISDFLKFKLLTKVA 219
>gi|167623368|ref|YP_001673662.1| flagellar hook-associated protein FlgL [Shewanella halifaxensis
HAW-EB4]
gi|167353390|gb|ABZ76003.1| flagellar hook-associated protein 3 [Shewanella halifaxensis
HAW-EB4]
Length = 396
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/435 (9%), Positives = 100/435 (22%), Gaps = 57/435 (13%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + +++S+G RV+ A D+ + + N +
Sbjct: 3 ISTAQMFHQNINSVTQKQSQTSQIIEQLSTGKRVNTAGDDPVAAAGINNLNQKNSVVDQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLR 120
I +++ I+++ + A + S+++ + G +D +++ E+ +L
Sbjct: 63 LKNIDYAKNRLSISESKLGSAATLASSVREQVLRAVNGSLTDSDRQTVADEMRGSLEELM 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + G+ + F D +G + +
Sbjct: 123 AIANSKD---------ESGNYLFGGFNTGSQPFEFDASGNAVYHGDSGVRESVVASGTTI 173
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ V + + +
Sbjct: 174 GANIPGDLAFMNAANGLGDYSVNYLATQTGEFNVESAKVTDPATHVPDTYTFNMVGNDLE 233
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + A + K
Sbjct: 234 VRDSTNAVVTTVTAFDPNTPVSFNGIEVKLDGKP-------------------------- 267
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + + I + K
Sbjct: 268 -------------------APGDSFTMEHAPEVSLLDTINSAIALIEDPNKVNTPAGKSE 308
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ +M++ ID+ + A G G+ + + + + L D D A T
Sbjct: 309 LAQMLNNIDSGMNQLDLARGVAGNSLKSLDSYAATHEEEQIVNNSALSMLEDLDYAEAIT 368
Query: 421 RLSALQTQQQLAVQA 435
+L Q A
Sbjct: 369 QLEQQQQALNAASSV 383
>gi|89214342|gb|ABD64483.1| flagellin [Bacillus thuringiensis serovar jinghongiensis]
Length = 219
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A ++ M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANVAVVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNANRHSLNKEFHSLTEQIGYIGETTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNMTKHIPPSPTQHDIKIST 144
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 63/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANVAVVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ A + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNANRHSLNKEFHSLTEQIGYIGETTEFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNMTKHIPPSPTQHDIKISTEQEARTAIRKIEEALQSVSFHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|170743240|ref|YP_001771895.1| flagellin domain-containing protein [Methylobacterium sp. 4-46]
gi|168197514|gb|ACA19461.1| flagellin domain protein [Methylobacterium sp. 4-46]
Length = 590
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 62/206 (30%), Positives = 100/206 (48%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTS+LTN +AM+A L+ IN L++ +RVS+G RVS A+DNAAYWSIA +++DN +L
Sbjct: 1 MTSLLTNSAAMTALTTLKSINAQLDMTSNRVSTGQRVSAASDNAAYWSIATTVRTDNASL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV D++GL SS V A G++ + + ++ K+ GTD +Q+EI LQS+++
Sbjct: 61 GAVKDSLGLSSSAVGTAYNGLNSILSDLQNLRAKLQTATNSGTDRSKVQTEIATLQSKMK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A S +G+NWL + ++ S I ++ + L +
Sbjct: 121 ATADSSVSSGQNWLSVNSAATNTSYKAVQNVVAGFSRASDGTINFSMININVGQIKLYDT 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDI 206
+ +
Sbjct: 181 NSTSVTAAATNAQVVGSTSLTGTSGF 206
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 63/375 (16%), Positives = 119/375 (31%), Gaps = 2/375 (0%)
Query: 79 AGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +S + T + + + +
Sbjct: 216 SAINEVSLAISVGGQTGNIVLNSSTMATAAKDLSKVTTDEFLKAINNQISASATLAGKVT 275
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+S + + + +T G ++ + +
Sbjct: 276 AGLDSSGRLTFNSTATGAATTLSVSVGNPSAGKALIDVGFGTTTGVATVAMVQGSAFTNL 335
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA- 257
+ + T A N + A I L A A
Sbjct: 336 DLSTGSKAITISDGTTSKTITLDAAAYAALATKTSAGNNAVNATDVAAMINTTLSATTAA 395
Query: 258 -APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
+ G + + A A + ++ T + T V + G
Sbjct: 396 KVAASVQGGKLVLTSTDTAGAGSKIIISNADAAFGFTAGTTTGTDVPAGGVVPRTGTGTD 455
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
T++ + G ++ + N ++ ++S +D I T
Sbjct: 456 AGVTQAQGILDTAMGTYNAQFGGGSYSIANLDISKLVGTNGDADLKNIISAVDKAIAAVT 515
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
A K+G+ ++I Q F+ + A + +G LVDAD+ ESTRL ALQTQQQLAVQ+L
Sbjct: 516 DAGTKLGASKTQIEGQSSFVDTLIKANQATIGTLVDADIEEESTRLKALQTQQQLAVQSL 575
Query: 437 SIVNNSTARILSLFR 451
SI N ++ +++LFR
Sbjct: 576 SIANGASQNLMTLFR 590
>gi|83649567|ref|YP_438002.1| flagellin-like protein [Hahella chejuensis KCTC 2396]
gi|83637610|gb|ABC33577.1| Flagellin and related hook-associated protein [Hahella chejuensis
KCTC 2396]
Length = 267
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 3/131 (2%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
+ ++ R+SSG R++ AAD+ A SIA + S S G G S A+
Sbjct: 14 NDAQIQRSFARISSGSRINSAADDPAGLSIATRISSRINGFSTAIRNAGDGISLSQTAQG 73
Query: 80 GMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+ + + + I+ +D ++Q E Q+ R + + SSFNG N +
Sbjct: 74 SLGQVTENLQRIRQLALQASNGIYNDSDRAALQREAAQILESTRQLMKQSSFNGVNLFDS 133
Query: 137 DLGSSTASIAK 147
+ A+
Sbjct: 134 SEEHRFQAGAE 144
Score = 75.2 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 41/98 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + VS ID ++ A + G++S+R ++ R + R+ D D
Sbjct: 170 ISSQQGAISAVSVIDDSLQATVDRAAQFGALSNRFEAGIRELETARLNATEARSRIADTD 229
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+A+ES L+ + Q + + N +L+L G
Sbjct: 230 IAAESANLATQKILTQAQIAIRAQANAQARFVLNLLSG 267
>gi|83589599|ref|YP_429608.1| flagellar hook-associated protein FlgL [Moorella thermoacetica ATCC
39073]
gi|83572513|gb|ABC19065.1| Flagellin-like protein [Moorella thermoacetica ATCC 39073]
Length = 305
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/258 (12%), Positives = 74/258 (28%), Gaps = 3/258 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
N+ Q+++SSG RV+ +D+ + K+ A + +D +++ +
Sbjct: 21 ENMARTQEQMSSGKRVNRPSDDPIVVARVLAFKTSIAANDQYKKNMEDAKGWLDASESVL 80
Query: 82 SKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIARGSSFNGENWLRTDL 138
A DV+ + G +S+ + E+ QL ++ +A S + +
Sbjct: 81 GMATDVLQRARELAVYGSNGTMPPESMDALGKEVDQLLDEMMQVANTSYGGRYIFGGSQT 140
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
++ S + + + +V + + I
Sbjct: 141 TATPFVSNSSSTDDPVEYNGDSAALNWEIAPGVTISVNENGDQIFMQAINNGSATESIFK 200
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
L + + KF A ++A +A +
Sbjct: 201 LLNDLSAALHGGTATDVSATLNKFDQAIDHILNIRATLGAKSNRMEMAMSRLEDTQIGLT 260
Query: 259 PNTTSGTSGSKSPSVAAS 276
+ + +V
Sbjct: 261 QTMSKLEDIDLAETVMNY 278
Score = 54.7 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 13/161 (8%), Positives = 42/161 (26%)
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ S + + + + ++ +S + +
Sbjct: 121 MMQVANTSYGGRYIFGGSQTTATPFVSNSSSTDDPVEYNGDSAALNWEIAPGVTISVNEN 180
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
D S + + + + ++ D I +G+
Sbjct: 181 GDQIFMQAINNGSATESIFKLLNDLSAALHGGTATDVSATLNKFDQAIDHILNIRATLGA 240
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
S+R+ + ++ + + + + +L D D+A
Sbjct: 241 KSNRMEMAMSRLEDTQIGLTQTMSKLEDIDLAETVMNYKTQ 281
>gi|226327706|ref|ZP_03803224.1| hypothetical protein PROPEN_01579 [Proteus penneri ATCC 35198]
gi|225203410|gb|EEG85764.1| hypothetical protein PROPEN_01579 [Proteus penneri ATCC 35198]
Length = 96
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 40/92 (43%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN+ ++ L L R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNYLSLVTQNNLNRSQSALGNAIQRLSSGLRINSAKDDAAGQAIANRFTANVKGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK 94
+ G S + +++ + + I+
Sbjct: 64 AARNANDGISIAQTTEGALNEINNNLQRIREI 95
>gi|331269309|ref|YP_004395801.1| flagellin [Clostridium botulinum BKT015925]
gi|329125859|gb|AEB75804.1| flagellin [Clostridium botulinum BKT015925]
Length = 268
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 47/137 (34%), Gaps = 4/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + KL E SSG R++ AAD+AA +I + K+ LS
Sbjct: 3 IN-NALVLGTFSKLNKNVKKSEKCNATASSGKRINKAADDAAGLTICESFKAQVRGLSQG 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
G S + M + ++ D K + E Q++ ++
Sbjct: 62 ERNTQEGLSLLQCVDGHMEGIQKDLQRMREMAIENATDTRTDEDRKKAEKEFNQIKENIK 121
Query: 121 DIARGSSFNGENWLRTD 137
++ + FN D
Sbjct: 122 YVSDNAEFNKIKLFDKD 138
Score = 74.0 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 32/94 (34%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ A + ID I + IGS SR+ + K + + R+ D DMA
Sbjct: 174 TRDASSNTIKSIDDAISKCVSQRVDIGSAMSRLESALNDTKNTNSSTTASLSRIEDIDMA 233
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + L + + N T + L
Sbjct: 234 NAAMNLFKSDVLVKYTNAMVCHANQDTNNSMKLL 267
>gi|317121044|ref|YP_004101047.1| flagellar hook-associated protein 3 [Thermaerobacter marianensis
DSM 12885]
gi|315591024|gb|ADU50320.1| flagellar hook-associated protein 3 [Thermaerobacter marianensis
DSM 12885]
Length = 295
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 43/115 (37%), Gaps = 3/115 (2%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
LR L Q+R++SG +V +D+ + +++ + +
Sbjct: 13 LADLRRAQERLSTYQNRLASGKQVQRPSDDPVATVDSLRLRARLAEVDRLRANAEDARDW 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARG 125
++I + + +A ++ + +I +E+ QL+ L ++A
Sbjct: 73 LEITDSALDRATQILQRARELAIRAASGTLPDSSLDAIAAEVQQLRDHLLEVANT 127
Score = 47.8 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+V+ +D I ++G+ +RI L + +R E+ + + DAD+A + RL
Sbjct: 209 AVVAALDDAIDGLLRFRAEVGAKVNRIELGLYRLDEIRIDTERLLSGVEDADIAETAMRL 268
Query: 423 SALQTQQQLAVQA 435
S + + A+ A
Sbjct: 269 SVSEAAYRAALMA 281
>gi|113969613|ref|YP_733406.1| flagellar hook-associated protein FlgL [Shewanella sp. MR-4]
gi|113884297|gb|ABI38349.1| flagellar hook-associated protein 3 [Shewanella sp. MR-4]
Length = 402
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/417 (10%), Positives = 111/417 (26%), Gaps = 45/417 (10%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
+ D++SSG +V+ + D+ + N + I ++ + ++
Sbjct: 20 QTATSKILDQLSSGKKVNTSGDDPVAALGIDNLNQRNALVDQFMKNIDYATNHLQQTESQ 79
Query: 81 MSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGS 140
+ +A ++S++K+ + G S+ Q+ L+ L + ++ E+ G+
Sbjct: 80 LGQADTLISSMKDLMLQGSNGSQTSEERQTIADDLRKSLDQLLTIANTKDESGNYLFAGN 139
Query: 141 STASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
T D N KI +
Sbjct: 140 KT-----------------------------------------DTLPFQFDANGKIVYQG 158
Query: 201 QVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPN 260
+ + S + + + ++
Sbjct: 159 DSGVHSAIIASGIQLNTNVAGDTAFIKSPNAMGDYSVNYLPSQQGEFSVTSAKLDGV--- 215
Query: 261 TTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDT 320
T S K + A I + +D A ++ + V +
Sbjct: 216 -TPSLSDYKINFLDDGAGGINVEVTDTATPANVISAAAPFDPSASINFDGVKLSIEGEPK 274
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
+ ++ I +S + + + ++++ + + +K + G
Sbjct: 275 IGDSFTLHQEAEVSIFDTFSKAIDLFENGEQVQTPSGQSELAQLLNNVQSGVKQISQQQG 334
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
G+ + D + + +L D D A+ T Q S
Sbjct: 335 LAGNSLKVLEKYTDKHTDEKLINTSALSKLEDVDYATAITEFEKQQLALNAVSSVFS 391
>gi|157056854|gb|ABV02441.1| flagellin A [Arcobacter butzleri]
Length = 283
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 95/203 (46%), Gaps = 3/203 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + N ++ +++SSGLR++ AA++A+ +IA +++ +++
Sbjct: 3 INTNVSSLTAQESTSQTNKSISSSLEKLSSGLRINKAANDASGLAIADKLRTQASSINQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ + IA M++ +++ T+K K+ +SI+ +I +L +QL
Sbjct: 63 ISNGNSAVALLQIADKSMAEQSNILDTVKAKLIQANTATTSADGRESIRKDIDKLLNQLD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA+ +++NG L+ D S TA+ + + + + + T+ + +
Sbjct: 123 NIAKQTNYNGTYLLQADATSGTAAASTAHVFQIGEKTTDTITMNTVQANTTGLGLTTLAG 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
+ + + +V+ +
Sbjct: 183 LAASGLTTAVAATGQTEVDAAIT 205
Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 34/86 (39%)
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ +D I G IGS +++ + ++ + D D A+ES + L
Sbjct: 198 TEVDAAITKLNGYRGDIGSTQNQVESAIRNLTTQATNIKNAESTIRDVDYAAESANYNKL 257
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q A+S N++ +L L +
Sbjct: 258 NIIAQAGSYAISQANSTQQNVLRLLQ 283
>gi|229127085|ref|ZP_04256084.1| Flagellin [Bacillus cereus BDRD-Cer4]
gi|228656438|gb|EEL12277.1| Flagellin [Bacillus cereus BDRD-Cer4]
Length = 115
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 40/115 (34%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ ++ E ++ +DT I+ GS +R+ + +
Sbjct: 1 MTIDSLNAKTITTDTLTTLADRATAETEITKLDTAIQKIADERATFGSQLNRLDHNLNNV 60
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ DADMA E + ++ + + + LS N + + L +
Sbjct: 61 TSQATNMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 115
>gi|90411012|ref|ZP_01219026.1| flagellar hook-associated protein [Photobacterium profundum 3TCK]
gi|90328225|gb|EAS44536.1| flagellar hook-associated protein [Photobacterium profundum 3TCK]
Length = 396
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/423 (10%), Positives = 105/423 (24%), Gaps = 53/423 (12%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ ++ Q +++SG R+ A D+ Q N + +I + +++
Sbjct: 16 NDMNRQQIKVQENQQQLASGKRLLTAGDDPVASIYIQNFDQQNTQIDQSVKSITMARNRL 75
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ +A +++ +++ K K V S + +Q F
Sbjct: 76 NNEEAAITEVENLLDDAKRKSMMMVNGSLSSDDRVAHKQDMQGVFDS------FMNLVNS 129
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
R + G+ + + F RD+NG V Y + L
Sbjct: 130 RDESGNYVFAGTQYSQQPFFRDNNGDVAYVGDSYQRMAKIAPSVDVPINDAGDKLFLEVA 189
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ Q ++ + ++ + V
Sbjct: 190 NPFGDYQPDYTLESGSLLLLSQAKNGNDADQSEYRVDFSTSSGSTSYELYQDGALVSTAP 249
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
+ +
Sbjct: 250 FD-----------------------------------------------PHKGIQWNTLQ 262
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + + + ++ + + ++ + K
Sbjct: 263 VDLKGEIKDGDSIALNRQENVSVFDAFKRGIELSDSDVSDASATAELHQVAEELAQGFKH 322
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
A ++G+ + QED + + + + G L D D A+ L+ Q + Q
Sbjct: 323 INRARSEVGTRLQTLDRQEDMHQDFKIVMNEARGTLEDLDYATAVIELNQNMMALQASQQ 382
Query: 435 ALS 437
A +
Sbjct: 383 AFA 385
>gi|182412271|ref|YP_001817337.1| flagellin domain-containing protein [Opitutus terrae PB90-1]
gi|177839485|gb|ACB73737.1| flagellin domain protein [Opitutus terrae PB90-1]
Length = 273
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 67/210 (31%), Gaps = 3/210 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN++A AS L N +L+ +R+SSG ++ AD+A +++ + + A
Sbjct: 4 VINTNYAATVASNNLAASNASLQKSLNRLSSGSKIVSPADDAGGLAVSMKLSAAAIRQGA 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQL 119
V+ I S + + V+ I + +D + +E L +QL
Sbjct: 64 VATNISNAISFLQTQDGALKVTAKVLERISELKVLYTDVTKSSSDKANYDAEFVALTAQL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
R A + +G + + + T L D+
Sbjct: 124 RSTALEKFNGVTMFGSAAIGQVDVTEDGGTQVAIASRNLLDGTSGVGTISASTITSLGDA 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ + ++ +
Sbjct: 184 AVTLANISTAIQNVATMRANNGSEQSRFNF 213
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 40/97 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ I T I+ GS SR + + + + + +E R+VD D
Sbjct: 177 ITSLGDAAVTLANISTAIQNVATMRANNGSEQSRFNFASELVIVNKSNLESANSRIVDVD 236
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+A+EST+L+ Q LS N S+ L L +
Sbjct: 237 VATESTQLARWNVLVQAGTSMLSQANTSSQTALKLLQ 273
>gi|37360920|dbj|BAC98369.1| flagellin [Burkholderia glumae]
Length = 384
Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 50/297 (16%), Positives = 93/297 (31%), Gaps = 3/297 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 1 MLGINTNVNSLVAQQNLNGSQSALSQAITRLSSGNRINSAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ S + + +S + I T +D + + E+ Q
Sbjct: 61 NQGVQNTNDAVSLIQTTSSQLSSLTSSLQRISTLATQAATGTLSSSDQAAAEKEVAQQIQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA ++FNG+N L G T I +V + D + + I L +
Sbjct: 121 EVNRIAAQTNFNGKNLLDGSAGIVTFQIGANVGQTVSLDLSQSLSAAKIGGGLVQSGTNV 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + + V D + + + A
Sbjct: 181 GTIQNLSLDANGAATTAAQPAITSVNVLSDGKGGFTLTDQNGQTLSTTAVGAIFTTGTAA 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A T+ + ++ + + + + N A
Sbjct: 241 GTGTAVTNLTLATGATSGMTTAQASAAANMISQINSVNAPPTVSNVNISNATSANQA 297
Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 50/138 (36%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T+ + T +T+ + + + ++N + + + + + + +
Sbjct: 247 TNLTLATGATSGMTTAQASAAANMISQINSVNAPPTVSNVNISNATSANQAIVSVANALS 306
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ + + ++ AD A E+ LS Q QQ +
Sbjct: 307 TINNLQATLGATQNRLQGIAQTQQANSTNLSSAQSQIQSADFAQETAALSKAQVLQQAGI 366
Query: 434 QALSIVNNSTARILSLFR 451
L+ N+ ++L L +
Sbjct: 367 SVLAQANSLPQQVLKLLQ 384
>gi|160876196|ref|YP_001555512.1| flagellar hook-associated protein FlgL [Shewanella baltica OS195]
gi|160861718|gb|ABX50252.1| flagellar hook-associated protein 3 [Shewanella baltica OS195]
gi|315268386|gb|ADT95239.1| flagellar hook-associated protein 3 [Shewanella baltica OS678]
Length = 403
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/420 (10%), Positives = 101/420 (24%), Gaps = 50/420 (11%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
+ D++SSG +V+ A D+ + N + I ++++ + ++
Sbjct: 20 QTATSKILDQLSSGKKVNTAGDDPVASQGIDNLNQKNALVDQFMKNIDYATNRLAVTESK 79
Query: 81 MSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+ A D+ +I+ + G GT+ + I E+ +L IA +G
Sbjct: 80 LGSAEDLTGSIREQVMRAINGTLSGTERQMIADEMKGSMEELLSIANSKDESGNYMFSGF 139
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ I ++ + + + L
Sbjct: 140 STDKEPFAFDNSTPPKIVYSGDSGVRNSLVQTGVAMGTNIPGDSAFMKAPNGLGDYSVNY 199
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ Q + + A + N + V A
Sbjct: 200 LASQQGEFSVKTAKIADTATYVADTYTFNFTDNGAGGTNLQVLDSANNPVANVANFDATN 259
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ +
Sbjct: 260 PVSFNG-----------------------------------------------IDVKIDG 272
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
+ + I S + I + + + + ++++ +D+ + ++
Sbjct: 273 KPSAGDSFTMEPQAEVSIFDTISSAIVLIEAPNSANTPQGRAQLAQILNNVDSGVNQISS 332
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
A G+ + + + + L D D AS T Q S
Sbjct: 333 ARSVAGNNLKVVESYTETHTEEKVVNTSALSLLEDLDYASAITEFEKQQLALNAVSNVFS 392
>gi|89214250|gb|ABD64437.1| flagellin [Bacillus thuringiensis serovar pulsiensis]
Length = 219
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + ++++
Sbjct: 1 EHLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVMNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTGFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNVTKHISPSPTQHDIKIST 144
Score = 69.8 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + +
Sbjct: 2 HLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVMNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTGFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ ++ + + + + + I+ ++ + +GS+ +R+ +
Sbjct: 122 GHTVNVTKHISPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGSMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAREMSDFLKFKLLTEVA 219
>gi|89100619|ref|ZP_01173477.1| flagellar hook-associated protein L [Bacillus sp. NRRL B-14911]
gi|89084643|gb|EAR63786.1| flagellar hook-associated protein L [Bacillus sp. NRRL B-14911]
Length = 276
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 63/201 (31%), Gaps = 3/201 (1%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ L + L +QD++++ + + +D+ +A ++D + IG +
Sbjct: 2 LRNLSNSYTKLGKLQDQIATQKKFTKPSDDPVSAMMAMNYRTDLNRIEQYQRNIGEAKNW 61
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNG 130
+D M K I + I+ K+I EI QL+ L DI
Sbjct: 62 IDSTDDAMDKGIMALQRIRELTVQASNGTLEGDQKKNIMEEIKQLKEHLIDIGETQVGGK 121
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+ T + G+ + ++I + +L S D L
Sbjct: 122 YIFNGTQTNVKPEGNGQFGEGAINLEVFSNIKIQVNMNGNEVFGDMLTDSGDIQGLINAL 181
Query: 191 DRNHKIKVEPQVLKDIDVSVY 211
D + D +
Sbjct: 182 DADSPEIGGYLEKVDKYIDQM 202
Score = 47.8 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 31/81 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + +D I A KIG+ +RI L +D ++ + + D D
Sbjct: 182 DADSPEIGGYLEKVDKYIDQMLAGRAKIGAKQNRIELMDDRLQQQEVFSTRILSDNEDVD 241
Query: 415 MASESTRLSALQTQQQLAVQA 435
M ++ ++ + A+
Sbjct: 242 MEKVIMEMTTQESVHRAALSI 262
>gi|190574256|ref|YP_001972101.1| flagellar hook-associated protein FlgL [Stenotrophomonas
maltophilia K279a]
gi|190012178|emb|CAQ45801.1| putative flagellar hook-associated protein [Stenotrophomonas
maltophilia K279a]
Length = 400
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/442 (9%), Positives = 107/442 (24%), Gaps = 57/442 (12%)
Query: 1 MTS-ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M+S I T+ + + L ++ ++++G ++ A D+ A + A
Sbjct: 1 MSSRISTSMMFNQSVSLMMAKQAKLSHLEQQIATGSKIVSAKDDPVAAGAAVGLDRSLAA 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQ---SEITQLQ 116
L + G +++ + + +++ D+M+ + + + + +E+ Q++
Sbjct: 61 LDRMKLNAGNVQNRLGVQENTLAQVNDLMARVNDLTIQASNPALGAADKKTLITELNQIR 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
L +A G + + D + D Y+
Sbjct: 121 EGLLSLANADDGTGRYVFGGTNDGDPPFAKINGKVVYRGDQTQRQIEVGPDTYVRDALPG 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+ G +D +
Sbjct: 181 SEIFMRIPTGDGFVDGVAAASNTGNGVLTNITR--------------------------- 213
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
G+ S + T T
Sbjct: 214 --------------------------DGSDSWNGQSFSIRFTAADQYQVLDGAGNVTGTG 247
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
++ T +S + + L+
Sbjct: 248 TFKAGDNVEVNGVRLQITGAPAAGDSFNVKPATSRDIFDTMDKLIAALDADTGTTAKMSA 307
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ ++ + + + + G+ + D + ++ + ++ D D A
Sbjct: 308 QQNELQSALRDVARASERMIDSRAAGGAQLKALDNAADMREANSVTLKTTLSQMRDLDYA 367
Query: 417 SESTRLSALQTQQQLAVQALSI 438
++ T Q A S
Sbjct: 368 DALSQYQLQSTALQAAQTIFSQ 389
>gi|254519426|ref|ZP_05131482.1| flagellin [Clostridium sp. 7_2_43FAA]
gi|226913175|gb|EEH98376.1| flagellin [Clostridium sp. 7_2_43FAA]
Length = 285
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 2/132 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N +++ + + + DR+++G +++ A DN +++ ++ L
Sbjct: 3 LNQNMQSLNVYRNYKKNLVTQSIALDRITTGSKINSAKDNPNKLGVSEGLRMQIRGLQMA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG--VERGTDSKSIQSEITQLQSQLRD 121
+ G S + +S + + IK V+ D IQ EI QL+ +
Sbjct: 63 ERNLQDGVSMMQTVDGSLSTISESLIRIKELTLQAGGVQNDEDLSIIQGEINQLKEHIDY 122
Query: 122 IARGSSFNGENW 133
S FNG
Sbjct: 123 TVNNSEFNGVKL 134
Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 15/116 (12%), Positives = 43/116 (37%)
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ M+ + K +++ ++ +D+ I+ + + G+I +R+
Sbjct: 166 FNVTTDMLIDSEGNSLKNINITNKNELDKNLNIVDSAIETMNSVRSRYGAIQNRMDTSAQ 225
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ +E R+ D+D+A E + + ++ + N +L +
Sbjct: 226 NLSGSSFNLENAESRIRDSDIALEMAEYARTSILHETSIALMQQTNRFPQDVLRIL 281
>gi|238024305|ref|YP_002908537.1| flagellin [Burkholderia glumae BGR1]
gi|238025845|ref|YP_002910076.1| flagellin [Burkholderia glumae BGR1]
gi|124695933|gb|ABN14301.1| FliC [Burkholderia glumae BGR1]
gi|237875039|gb|ACR27372.1| FliC [Burkholderia glumae BGR1]
gi|237878970|gb|ACR31302.1| FliC [Burkholderia glumae BGR1]
Length = 384
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 50/297 (16%), Positives = 94/297 (31%), Gaps = 3/297 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 1 MLGINTNVNSLVAQQNLNGSQSALSQAITRLSSGNRINSAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ S + + +S + I T +D + + E+ Q
Sbjct: 61 NQGVQNTNDAVSLIQTTSSQLSSLTSSLQRISTLATQAATGTLSSSDQAAAEKEVAQQIQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA ++FNG+N L G T I +V + D + + I L +
Sbjct: 121 EVNRIAAQTNFNGKNLLDGSAGIVTFQIGANVGQTVSLDLSQSLSAAKIGGGLVQSGTNV 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + + V D + + + A
Sbjct: 181 GTIQNMSLDANGAATTAAQPAITSVNVLSDGKGGFTFTDQNGQALSTTAVGAIFTTGTAA 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A T+ + ++ + + + + N + A
Sbjct: 241 GTGTAVTNLTLATGATSGMTTAQASAAANMISQINSVNAPPTVSSLNINNATSANQA 297
Score = 77.9 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 83/293 (28%)
Query: 159 GKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+ L + + + + L D + +
Sbjct: 92 STLATQAATGTLSSSDQAAAEKEVAQQIQEVNRIAAQTNFNGKNLLDGSAGIVTFQIGAN 151
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
+ S + A G + + A T+ + + S
Sbjct: 152 VGQTVSLDLSQSLSAAKIGGGLVQSGTNVGTIQNMSLDANGAATTAAQPAITSVNVLSDG 211
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
+D +A + ++ + + T+ + T +T+ + +
Sbjct: 212 KGGFTFTDQNGQALSTTAVGAIFTTGTAAGTGTAVTNLTLATGATSGMTTAQASAAANMI 271
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ ++N ++ N + + + + + +G+ +R+ +
Sbjct: 272 SQINSVNAPPTVSSLNINNATSANQAIVSVANALSTINNLQATLGATQNRLQGIAQTQQA 331
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ AD A E+ LS Q QQ + L+ N+ ++L L +
Sbjct: 332 NSTNLSSAQSQIQSADFAQETAALSKAQVLQQAGISVLAQANSLPQQVLKLLQ 384
>gi|315928708|gb|EFV07986.1| Flagellin B [Campylobacter jejuni subsp. jejuni 305]
Length = 200
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 35/97 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T IGS+ +++ + + I + + V+ + D D
Sbjct: 104 VTTLKGAMAVMDIAETATTNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVD 163
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A+S N +L L +
Sbjct: 164 FAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 200
>gi|218658528|ref|ZP_03514458.1| flagellin C protein [Rhizobium etli IE4771]
Length = 126
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/105 (45%), Positives = 72/105 (68%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ +A ++ ++ ++ +K T+A +GS+S RI Q+DF+ + D+++ G
Sbjct: 22 SIYAMDITDFTAGQIQTALTNVEAALKSMTSAGAALGSLSKRIDSQDDFVSALSDSIDSG 81
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
VGRLVDA+M ES+RLSALQTQQQLA+Q+LSI N+S+ ILSLFR
Sbjct: 82 VGRLVDANMEEESSRLSALQTQQQLAIQSLSIANSSSQNILSLFR 126
>gi|125654644|ref|YP_001033838.1| flagellin [Rhodobacter sphaeroides 2.4.1]
gi|126464889|ref|YP_001041865.1| flagellin domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|221634509|ref|YP_002523197.1| Flagellin [Rhodobacter sphaeroides KD131]
gi|332561331|ref|ZP_08415646.1| FlaA [Rhodobacter sphaeroides WS8N]
gi|77386304|gb|ABA81733.1| Flagellin [Rhodobacter sphaeroides 2.4.1]
gi|126106704|gb|ABN79229.1| flagellin domain protein [Rhodobacter sphaeroides ATCC 17029]
gi|221163382|gb|ACM04344.1| Flagellin [Rhodobacter sphaeroides KD131]
gi|332274130|gb|EGJ19447.1| FlaA [Rhodobacter sphaeroides WS8N]
Length = 281
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/137 (35%), Positives = 72/137 (52%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN SAM A Q LR IN L QD VS+G V A DNAA WSIA++M++D +
Sbjct: 1 MSSILTNTSAMVALQTLRSINSGLAKTQDEVSTGKAVGSAKDNAAIWSIAKVMETDASSF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ D + + S + + G + + ++ +K+ D +Q+ IT Q+
Sbjct: 61 KVIGDQLAVAESTLAVGVTGAEQVVSLLKEMKDLAAGAANDTADFAKVQAAITAKSDQIT 120
Query: 121 DIARGSSFNGENWLRTD 137
+ GS NG L+TD
Sbjct: 121 AVINGSQLNGIALLKTD 137
Score = 66.3 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 65/138 (47%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T Y V + A A +K + V I+ I
Sbjct: 144 TAYDVLASLDRTSGTVATSAVSITVAGPDFEANVNAAGVTAVADKASALTAVGEIEALID 203
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A A +G+ +SR+ Q+ F+ + D+++ G+G +VDADM + S +L ALQ QQQLA
Sbjct: 204 TAIQGAATLGAAASRVTDQKGFVSKLVDSLKNGIGSMVDADMEAASAKLQALQVQQQLAT 263
Query: 434 QALSIVNNSTARILSLFR 451
Q+LSI N + IL+LF+
Sbjct: 264 QSLSIANQAPQNILTLFK 281
>gi|157056865|gb|ABV02449.1| flagellin A [Arcobacter cibarius]
Length = 280
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 79/174 (45%), Gaps = 3/174 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + ++ + +++S+GL+++ A+D+A+ +IA +++ +++
Sbjct: 3 INTNVSSLTAQEAAQNTTKTITGSLEKLSTGLKINKASDDASGLAIADKLRTQATSINQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ + IA M + +++ T+K K+ ++I+ +IT+L QL
Sbjct: 63 IANGNSAVALLQIADKSMGEQSNILDTVKAKLIQANTDTTSADGREAIRKDITKLLKQLD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
+IA +++NG L+ S+ S + D + T
Sbjct: 123 NIATQTNYNGTALLQASATSNAISGGLNFQIGEKATDVITNTGIRSNTQGLSLT 176
Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 31/95 (32%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
K + +D I G IGS +++ + V+ + D D A
Sbjct: 186 TKTVASAQQTIVDKAITTLNGYRGDIGSTQNQVESAVRNLMTQATNVKAAESIIRDVDYA 245
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ES + Q A+S N + L +
Sbjct: 246 AESANFNKQNIIAQAGSYAISQANAVQQNVSRLLQ 280
>gi|126175139|ref|YP_001051288.1| flagellar hook-associated protein FlgL [Shewanella baltica OS155]
gi|304409971|ref|ZP_07391590.1| flagellar hook-associated protein 3 [Shewanella baltica OS183]
gi|307302316|ref|ZP_07582074.1| flagellar hook-associated protein 3 [Shewanella baltica BA175]
gi|125998344|gb|ABN62419.1| flagellar hook-associated protein 3 [Shewanella baltica OS155]
gi|304351380|gb|EFM15779.1| flagellar hook-associated protein 3 [Shewanella baltica OS183]
gi|306914354|gb|EFN44775.1| flagellar hook-associated protein 3 [Shewanella baltica BA175]
Length = 403
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/420 (10%), Positives = 101/420 (24%), Gaps = 50/420 (11%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
+ D++SSG +V+ A D+ + N + I ++++ +A++
Sbjct: 20 QTATSKILDQLSSGKKVNTAGDDPVASQGIDNLNQKNALVDQFMKNIDYATNRLAVAESK 79
Query: 81 MSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+ A D+ ++++ G GT+ + I E+ +L IA +G
Sbjct: 80 LGSAEDLTGLMRDQVMRAINGTLSGTERQMIADEMKGSLEELLSIANSKDESGNYMFSGF 139
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ I ++ + + + L
Sbjct: 140 STDKEPFAFDNSTPPKIVYSGDSGVRNSLVQTGVAMGTNIPGDSAFMKAPNGLGDYSVNY 199
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ Q + + A + N + V A
Sbjct: 200 LASQQGEFSVKTAKIADAATYVADTYTFNFTDNGAGGTNLQVLDSANNPVANVANFDATN 259
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ +
Sbjct: 260 PVSFNG-----------------------------------------------IDVKIDG 272
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
+ + I S I + + + + ++++ ID+ + ++
Sbjct: 273 KPSAGDSFTMEPQAEVSIFDTISSAIALIEDPNSANTSQGRAQLAQILNNIDSGVNQISS 332
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
A G+ + + + + L D D AS T Q S
Sbjct: 333 ARSVAGNNLKVVESYTETHTEEKVVNTSALSLLEDLDYASAITEFEKQQLALNAVSNVFS 392
>gi|89214266|gb|ABD64445.1| flagellin [Bacillus thuringiensis serovar nigeriensis]
Length = 219
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRHSLNKEFQSLAEQISYIGETTEFNDLSVFGGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IGHTINMTKHIPPSPAQHDIKIST 144
Score = 69.8 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 22/218 (10%), Positives = 61/218 (27%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRHSLNKEFQSLAEQISYIGETTEFNDLSVFGGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTINMTKHIPPSPAQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGAMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFFKFKLLTEVA 219
>gi|87242322|gb|ABD33700.1| flagellin [Bacillus thuringiensis serovar kurstaki]
Length = 238
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ +R+SSG ++ AAD+AA +IA M++ G L+ + S + A +
Sbjct: 1 DKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVGARNTQDAMSALRTGDAAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+++ +++ T D S+ E L ++ IA ++FNG +L
Sbjct: 61 GSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEIDHIADKTNFNGNAFLGGAG 120
Query: 139 G 139
G
Sbjct: 121 G 121
Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 28/66 (42%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+DT I+ A GS +R+ + + + ++ DADMA E + ++ +
Sbjct: 173 LDTAIQEIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKI 232
Query: 428 QQQLAV 433
+ +
Sbjct: 233 LNEAGI 238
>gi|297570284|ref|YP_003691628.1| flagellin hook IN repeat protein [Desulfurivibrio alkaliphilus
AHT2]
gi|296926199|gb|ADH87009.1| flagellin hook IN repeat protein [Desulfurivibrio alkaliphilus
AHT2]
Length = 983
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 49/128 (38%), Gaps = 8/128 (6%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI N L +N ++ + ++SSG +S +DN A ++++ +
Sbjct: 5 MQSIYNNI-----LTNLNKVNSDMNRINQQISSGKLMSKISDNPVNLVNALGLRTNLSEI 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
I G++ + ++ +++ D++ K + ++ E+ L
Sbjct: 60 GQYQRNINYGNTIISASETALTETKDLVMRAKTLAIQAANAPMTAENRENAAMEVKNLWE 119
Query: 118 QLRDIARG 125
Q +A
Sbjct: 120 QAIILANS 127
Score = 46.3 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 29/68 (42%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+++ + ++ + T G+ ++R+ +Q + ++ A + + L D DM
Sbjct: 895 GLQKSIGDLEGLLNELTNQIADFGARANRMEVQNNIYMNLKLATAENLSELEDTDMIKAI 954
Query: 420 TRLSALQT 427
L A +
Sbjct: 955 MELKAKEV 962
>gi|89214270|gb|ABD64447.1| flagellin [Bacillus thuringiensis serovar seoulensis]
Length = 219
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLTTGKKLNNASDNPANVAIVTRMHARASGMRVAIRNNENALSMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQISYIGETTEFNNLPVFGDQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNLTKHIPPSPTQHDIKIST 144
Score = 66.7 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLTTGKKLNNASDNPANVAIVTRMHARASGMRVAIRNNENALSMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQISYIGETTEFNNLPVFGDQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+H +
Sbjct: 122 GHTVNLTKHIPPSPTQHDIKISTEQEARTAIRKIEEALQNVSLHRADLGAMINRLHFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDASPRIEDADMAQEMSDFLKFKLLTKVA 219
>gi|157056862|gb|ABV02447.1| flagellin A [Arcobacter cryaerophilus]
Length = 316
Score = 88.3 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 72/139 (51%), Gaps = 3/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S++ A + + N ++ +++S+GL ++ A+D+A+ +IA +++ +++
Sbjct: 3 INTNISSLGAQEAAANTNKSISNSLEKLSTGLAINKASDDASGLAIADKLRTQVTSINQS 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ + IA M++ ++ TIK+K+ +I ++T+L QL
Sbjct: 63 ISNGNSTVALLQIADKSMAEQSKILDTIKSKLIQANSDTTSDDGRTAIAKDVTKLLQQLN 122
Query: 121 DIARGSSFNGENWLRTDLG 139
+IA +++NG N L++
Sbjct: 123 NIAEQTNYNGTNLLQSART 141
Score = 83.3 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 31/85 (36%)
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
ID I G IGS +++ + ++ + D D A ES + L
Sbjct: 232 AIDKAITKLNGYRGDIGSTQNQVESAVRNLMTQATNIKAAESVIRDVDYAQESANFNKLN 291
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
Q A+S N + +L L +
Sbjct: 292 IISQAGSYAISQSNATQQNVLRLLQ 316
>gi|254695101|ref|ZP_05156929.1| Flagellin [Brucella abortus bv. 3 str. Tulya]
gi|261215452|ref|ZP_05929733.1| flagellin domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|260917059|gb|EEX83920.1| flagellin domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
Length = 256
Score = 88.3 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 1/204 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SILTN SA++A Q L N +LE Q+R+S+GLR+S+A+DNA+YWSIA MKSDN A
Sbjct: 1 MASILTNSSALTALQTLASTNKSLESTQNRISTGLRISEASDNASYWSIATSMKSDNKAN 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE-RGTDSKSIQSEITQLQSQL 119
SAV DA+GLG+ KVD A + ++K + + IK K+ + + D I++EI + + +
Sbjct: 61 SAVQDALGLGAGKVDTAYSAINKIRESVDDIKTKLVSAMGASTEDKGKIETEIKSIVANI 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ G N L + + G+ + D V+ T D + ++
Sbjct: 121 NSALSNVNYAGSNLLNGPTTDLNVVASYNRSGNAVTVDKITVKATDTDAKTMVKDIVDAG 180
Query: 180 STDGTERYGLLDRNHKIKVEPQVL 203
+
Sbjct: 181 FFTSASDDTAIGTALNTVETALAS 204
>gi|89214306|gb|ABD64465.1| flagellin [Bacillus thuringiensis serovar kurstaki]
gi|89214346|gb|ABD64485.1| flagellin [Bacillus thuringiensis serovar balearica]
Length = 219
Score = 88.3 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVSNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IGHTINMMKHIPPSPTQHDIKIST 144
Score = 67.5 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 63/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + S +
Sbjct: 2 HLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVSNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ M + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTINMMKHIPPSPTQHDIKISTEQEARAAILKIEDALQSVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ ++ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASQVEDADMAQEMSDFLKFKLLTEVA 219
>gi|54308104|ref|YP_129124.1| flagellar hook-associated protein FlgL [Photobacterium profundum
SS9]
gi|46912530|emb|CAG19322.1| hypothetical flagellar hook-associated protein FlgL [Photobacterium
profundum SS9]
Length = 396
Score = 88.3 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 47/438 (10%), Positives = 111/438 (25%), Gaps = 54/438 (12%)
Query: 1 MTSILTNHSAMSASQK-LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M S + N +A + ++ Q +++SG R+ A D+ Q N
Sbjct: 1 MISRIANFHHYNAVSNDMNRQQIKVQENQQQLASGKRLLTAGDDPVASIYIQNFDQQNTQ 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQL 119
+ +I + ++++ +A +++ +++ K K V S + +Q
Sbjct: 61 IDQSVKSITMARNRLNNEEAAITEVENLLDDAKRKSMMMVNGSLSSDDRVAHKQDMQGIF 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
F R + G+ + + F RD+NG V Y +
Sbjct: 121 DS------FMNLVNSRDESGNYVFAGTQYSQQPFFRDNNGDVAYVGDSYQRMAKIAPSVD 174
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
L + Q ++ + ++ +
Sbjct: 175 VPINDAGDKLFLEVANPFGDYQPDYALESGSLLLLSQAKNGNDADQSEYRVDFSTSSGST 234
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
V
Sbjct: 235 SYELYQDGALVSTAPFD------------------------------------------- 251
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + + + ++ +
Sbjct: 252 ----PHKGIQWNTLQIDLKGEIKNGDSIALNRQENVSVFDAFKRGINLSDSDVSDASATA 307
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ + K A ++G+ + QED + + + + G L D D A+
Sbjct: 308 ELHQVAEELAQGFKHINRARSEVGTRLQTLDRQEDMHQDFKIVMNEARGTLEDLDYATAV 367
Query: 420 TRLSALQTQQQLAVQALS 437
L+ Q + QA +
Sbjct: 368 IELNQNMMALQASQQAFA 385
>gi|172058467|ref|YP_001814927.1| flagellar hook-associated protein 3 [Exiguobacterium sibiricum
255-15]
gi|171990988|gb|ACB61910.1| flagellar hook-associated protein 3 [Exiguobacterium sibiricum
255-15]
Length = 320
Score = 88.3 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 53/143 (37%), Gaps = 10/143 (6%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
TN +SA L +Q+++ SG ++ +++ +++ +
Sbjct: 11 TNIGYLSA------SYQKLSSMQEQLISGKKIQRPSEDPVVAMQGIRYRTEVREVEQFKK 64
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDI 122
+ + +D+ + +++ MS ++ T T K+IQSE+ QL + +
Sbjct: 65 NVNEATGWMDLTDSALNEVTSAMSRVRELTTQAATDTYDATQRKAIQSEVGQLIEHIGTM 124
Query: 123 ARGSSFNGENWLRTDLGSSTASI 145
A + +N +
Sbjct: 125 A-NTKYNEKGIFNGTATDKPFVS 146
Score = 43.2 bits (99), Expect = 0.080, Method: Composition-based stats.
Identities = 24/294 (8%), Positives = 69/294 (23%), Gaps = 6/294 (2%)
Query: 142 TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
+ S+ I + + + + + + + +
Sbjct: 19 SYQKLSSMQEQLISGKKIQRPSEDPVVAMQGIRYRTEVREVEQFKKNVNEATGWMDLTDS 78
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
L ++ ++ + + + T
Sbjct: 79 ALNEVTSAMSRVRELTTQAATDTYDATQRKAIQSEVGQLIEHIGTMANTKYNEKGIFNGT 138
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
+ + T ++ + Y S+ +V D
Sbjct: 139 ATDKPFVSIEGLRDYLTSSGKPVDSVFTDGDPATKGSEIIQYEISSGIQVQVNVSPTDVF 198
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
S + + Y + D+ N + M+ +D +
Sbjct: 199 S------PETFTTLKKLYDALGGVSETGGTADSSNNGAQLSAMLKDLDVMVNQTVETRAD 252
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G+ +R+ L ++ V+ + D + L + +T + A+ A
Sbjct: 253 LGARVNRLELNASRLEDQEIIVKTVMSDNEDIEAEKVIMELKSYETLHRAALSA 306
>gi|149182550|ref|ZP_01861022.1| flagellar hook-associated protein L [Bacillus sp. SG-1]
gi|148849742|gb|EDL63920.1| flagellar hook-associated protein L [Bacillus sp. SG-1]
Length = 286
Score = 88.3 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 61/152 (40%), Gaps = 3/152 (1%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A ++ + L L Q+++++G +++ + + +S+ +
Sbjct: 3 ASNSLRHLSKSYERLGDYQNQLATGKKITRPSQDPVVAMKGMYYRSNLAENEQYQRNLSE 62
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGS 126
+D ++AG+ A + + ++ + G D ++I EI Q++ L ++A
Sbjct: 63 AYLWMDHSEAGLDHATNALQRVRELVIQGKNDTYGEQDREAISQEIEQIKQDLVEVANTK 122
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDN 158
+ T++ S+ + + + + +D
Sbjct: 123 VAGRYIFNGTNVDSAPVAHGEPPVVTINTEDY 154
Score = 49.7 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 28/262 (10%), Positives = 72/262 (27%)
Query: 174 TVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233
+ + D + + + +P V + + ++
Sbjct: 11 SKSYERLGDYQNQLATGKKITRPSQDPVVAMKGMYYRSNLAENEQYQRNLSEAYLWMDHS 70
Query: 234 AANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATT 293
A + + + S+
Sbjct: 71 EAGLDHATNALQRVRELVIQGKNDTYGEQDREAISQEIEQIKQDLVEVANTKVAGRYIFN 130
Query: 294 KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD 353
++ S P NT Y+ S L+ + ++ + + T
Sbjct: 131 GTNVDSAPVAHGEPPVVTINTEDYLVEVSQGLNLKANIDADQVFSQELFTTLEDIKKTFS 190
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
M+++++ +D++I A + G+ +R+ + +D + + + DA
Sbjct: 191 KDYSADKMDKLLTDLDSKIGSLQAERSETGARYNRLEMIDDRLTKTEVMANQIISDNEDA 250
Query: 414 DMASESTRLSALQTQQQLAVQA 435
D+ T L A ++ Q A+
Sbjct: 251 DIERVITDLRAQESVHQAALSV 272
>gi|89214226|gb|ABD64425.1| flagellin [Bacillus thuringiensis serovar xiaguangiensis]
Length = 216
Score = 88.3 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 43/129 (33%), Gaps = 3/129 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDALSMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN T
Sbjct: 61 QRMRDLAVQSANDTNSNKNRDSLNKEFQSLTEQVGYIGATTEFNDLFVFDGQSRPITLDD 120
Query: 146 AKSVIGSFI 154
+
Sbjct: 121 IGHTVNHIP 129
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 18/162 (11%), Positives = 52/162 (32%)
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ + KN + + + + T + D +
Sbjct: 55 TVTNILQRMRDLAVQSANDTNSNKNRDSLNKEFQSLTEQVGYIGATTEFNDLFVFDGQSR 114
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
D G+++ + + + + + + I+ ++ + +G++ +R+
Sbjct: 115 PITLDDIGHTVNHIPPSPTQHDIKISTEQEARTAIRKIEEALQNVSLHRADLGAMINRLQ 174
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ + A+ R+ DADMA E + + ++A
Sbjct: 175 FNIENLNSQSMALTDASSRIEDADMAQEMSDFLKFKLLTKVA 216
>gi|153947729|ref|YP_001399646.1| flagellin [Yersinia pseudotuberculosis IP 31758]
gi|152959224|gb|ABS46685.1| flagellin [Yersinia pseudotuberculosis IP 31758]
Length = 394
Score = 88.3 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 3/143 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN SA +A L + R+S+G R++ ADNAA I M+
Sbjct: 3 LSIHTNASAKTAINSLSNAGLANAKSSQRLSTGFRINSPADNAAGLQITNRMEKFLNGAG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQ 118
I + + IA G+++++ ++ +K T D ++IQ E T+L +
Sbjct: 63 QAKQNIQESIAMLQIADGGLAESVKTLNAMKKLATQAANDTNSAADREAIQKEFTELGKE 122
Query: 119 LRDIARGSSFNGENWLRTDLGSS 141
L++ + +N E
Sbjct: 123 LQNALNNTEYNSEKLFADGGKMR 145
Score = 74.4 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 36/103 (34%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
+K + I A +G+ +R+ + + M + +G
Sbjct: 292 VMEMQLLDKDLAMMADKKLSDVIDAYGAFRATLGANQNRLQSSSNNLDNMISNTAQALGS 351
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ D D A E + + Q +V L N +T I +L +G
Sbjct: 352 IKDTDFADEMKNHAQSEMLMQSSVMMLKKANAATQLISTLLQG 394
>gi|238927684|ref|ZP_04659444.1| flagellar hook-associated protein 3 [Selenomonas flueggei ATCC
43531]
gi|238884400|gb|EEQ48038.1| flagellar hook-associated protein 3 [Selenomonas flueggei ATCC
43531]
Length = 449
Score = 88.3 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 57/437 (13%), Positives = 133/437 (30%), Gaps = 4/437 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N+S + L +++Y + ++ G ++ +DN+ +S G
Sbjct: 1 MIRISSNYSVQRYQKDLNELDYTKAKLMEQ-GDGKKLHRPSDNSVDYSRYLRYNVSEGEN 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQ--SEITQLQSQ 118
+++ G S ++ + +S D+ T K K G D S + ++++Q
Sbjct: 60 DRYQESVKAGISWMNTTQTALSSMEDIQKTFKAKTIQGANDDKDEHSGDWPAIAREMKAQ 119
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
++ I + + + + + +
Sbjct: 120 IQQIVSLGNTQLGDRYVFSGQADLRQPFSLSDEKKPLSRGLAKTLDDRQAAFFNDVSNGN 179
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
S+ + L + K + DI + G +T S A T
Sbjct: 180 SADFLHQMLSLDGSDGKTYYLNTLTGDIYTKQFVQEGYKDVITQGRSTVSAADRVGNITT 239
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
A G + S + +VA I I+
Sbjct: 240 GTNFIKNNFKNTGEIIDDPAAAPGLGANWSDTTAVAGVTLKFSTVRQQIASYNGDFRYIS 299
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
++ +D L K+ E + +T +A T+A +
Sbjct: 300 MVKQNGSTEPTADTVNKTGLDVFGRDLFDDKNSGNEPSGTAMLNN-MLTVYAKTNAADPH 358
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+ ++ DT + A + G+ + + + ++ + + + + AD+A
Sbjct: 359 WLSSDGITLADTANQVTLQAHTETGARTQLYKNMTEVLTDHKENITRDITNVSSADVAEL 418
Query: 419 STRLSALQTQQQLAVQA 435
+ ++ QT +++
Sbjct: 419 AMKMMQQQTIMSMSLSM 435
>gi|319781674|ref|YP_004141150.1| flagellin domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167562|gb|ADV11100.1| flagellin domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 333
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 68/148 (45%), Positives = 99/148 (66%), Gaps = 1/148 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SI+TN +A++A Q L + +L+ Q R+S+G RVS A+DNAAYWSIA M+SDN A+
Sbjct: 1 MSSIMTNSAALTALQSLNATSKSLQDTQARISTGYRVSQASDNAAYWSIATTMRSDNQAM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIK-NKITAGVERGTDSKSIQSEITQLQSQL 119
S VSDA+GLG+SKVD A GM+ AI ++ IK + + + + Q+EIT LQ+Q+
Sbjct: 61 STVSDALGLGASKVDTAYTGMNSAISTINQIKAKLLASYGQTDASKEKTQTEITALQAQM 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAK 147
+ A G++F+G N L D GS+ + A
Sbjct: 121 KSYADGATFSGTNMLSVDSGSTATTAAD 148
Score = 66.7 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 64/330 (19%), Positives = 109/330 (33%)
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+S + S + ++ I + R + ST
Sbjct: 4 IMTNSAALTALQSLNATSKSLQDTQARISTGYRVSQASDNAAYWSIATTMRSDNQAMSTV 63
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + + + + A A
Sbjct: 64 SDALGLGASKVDTAYTGMNSAISTINQIKAKLLASYGQTDASKEKTQTEITALQAQMKSY 123
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
AT + + +T + + K S S I V+ + +
Sbjct: 124 ADGATFSGTNMLSVDSGSTATTAADVKILSAFNRDAAGASSISTIDVKVESIKLYEAGTT 183
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
+ + + + + + + ++
Sbjct: 184 SGLAKGILDTYRLGSDGSVAAAVSGTQTALGAAALATDTYSAASLSIFSGGTAASDSQIK 243
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+M++ ID+ + T +A +G+ S I LQ+ F + D++++GVG+LVDADM ESTRL
Sbjct: 244 QMLTVIDSALADMTNSATTLGAAKSSIDLQKTFTSDLMDSIDRGVGQLVDADMNKESTRL 303
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFRG 452
ALQ QQQL VQALSI N S+ ILSLFRG
Sbjct: 304 QALQVQQQLGVQALSIANGSSQSILSLFRG 333
>gi|299531279|ref|ZP_07044689.1| flagellar hook-associated protein 3 [Comamonas testosteroni S44]
gi|298720686|gb|EFI61633.1| flagellar hook-associated protein 3 [Comamonas testosteroni S44]
Length = 404
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/435 (10%), Positives = 106/435 (24%), Gaps = 47/435 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + S L +L + ++ ++G RV A+D+ + A+ ++
Sbjct: 6 IGTANMYDSTINNLGSRQSSLVDLMEKTTAGKRVLRASDDPVAAAQAERARTRITRSEND 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+G + ++ + KA + ++ + D + + + Q++S +
Sbjct: 66 QRVLGAQRDVIAQGESELGKAHGALQDFRDLLMQAGNGSYDQVARDALVKQMESLRDQV- 124
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
G + G S G + L S
Sbjct: 125 -----LGYANAKDSNGLPIFRGLGSPDTPLQSTPPGSSSQLNPGQNTGSDNGLPISLDGH 179
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ N V
Sbjct: 180 AAWLNVPTGNGVFVVNGAASNSGKAW---------------------------------- 205
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ P+ +G S + + + + + T ++
Sbjct: 206 -------ADVGSVTDPSKVTGDSYTLVFTKDPTTGEVSYEINSSSATVTNPVVPSTPYKE 258
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + + + +
Sbjct: 259 GQAITVGGQQISIKGTPADGDSFTMSPSTRTDIFSVLDQAIATVKGGTGGSTALQQGLGR 318
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+S +D+ + A G R E +K E R D DM + +++
Sbjct: 319 ALSELDSGMNRVQAMRSYAGDQLKRADGLESDMKDQALTQEGARSRAEDIDMITALSQVE 378
Query: 424 ALQTQQQLAVQALSI 438
+ Q A+Q+ +
Sbjct: 379 TQKVGLQAALQSYAQ 393
>gi|315637877|ref|ZP_07893067.1| flagellin B [Campylobacter upsaliensis JV21]
gi|315482118|gb|EFU72732.1| flagellin B [Campylobacter upsaliensis JV21]
Length = 116
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 36/97 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ ++T IG++ +++ + + I + + V+ + D D
Sbjct: 20 VTTLKGAMAVMDVVETATINLDQIRADIGAVQNQLQVTINNITVTQVNVKAAESTIRDVD 79
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+ES S Q A+S N +L L +
Sbjct: 80 FAAESANFSKYNILAQSGSYAMSQANQVQQNVLKLLQ 116
>gi|89214232|gb|ABD64428.1| flagellin [Bacillus thuringiensis serovar sumiyoshiensis]
gi|89214298|gb|ABD64461.1| flagellin [Bacillus thuringiensis serovar aizawai]
Length = 219
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 44/144 (30%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L + I + FN + T
Sbjct: 61 QRMRDLAVQSSNGTNSNKNRHSLNKEFLSLTELIGYIDATTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNMTKHIPPSPTQHDIKIST 144
Score = 67.5 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/218 (10%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++ + T T + + + L
Sbjct: 62 RMRDLAVQSSNGTNSNKNRHSLNKEFLSLTELIGYIDATTEFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNMTKHIPPSPTQHDIKISTEQEARAAIRKIEEPLQSVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ + R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMTLTDTASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|226944499|ref|YP_002799572.1| flagellar hook-associated protein FlgL [Azotobacter vinelandii DJ]
gi|226719426|gb|ACO78597.1| flagellar hook-associated protein [Azotobacter vinelandii DJ]
Length = 401
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/432 (9%), Positives = 96/432 (22%), Gaps = 46/432 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T L V +++SG RV + +D+ S A +
Sbjct: 3 ISTVTMFEQGLSSLVRQQSEYLKVGQQIASGKRVVNPSDDPQAASRAISVSQSQAVNQQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
DA + + ++ ++ D +++ K ++ S L S+++ I
Sbjct: 63 DDARVSTRNALSQEESVLNSIADAIASAKTRLVQAGNGTLSDADRSS----LASEIKGI- 117
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
Sbjct: 118 -----------------------------------------YESLLGQANATDGSGRYLF 136
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
K V D + S + + + A+
Sbjct: 137 GGYQDSSPPFVKDNTSGAVAYQGDEGLILQQVDASRQMPSSDNGKQIFQSVHGSAGYLAQ 196
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A + + ++ ++ + T
Sbjct: 197 ADAGNAGTVTFTGPYVSDSTAAGFGSGFTLDFAVATDGSVTYSSDGGTTQVPYADGQSIE 256
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
N + T D+ D + L+ + D + +
Sbjct: 257 INGLSLTLEGTPADGDSIVVEKAQNADPDLFRTLENMIAALDTPVETDADLARLQNTLST 316
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+D + +G+ + + + + ++ + L+D D + S
Sbjct: 317 SSRELDNALDSVLTVRASVGARLNELDVLDAVGDNRALNYKQTLSDLIDLDYNEAISEYS 376
Query: 424 ALQTQQQLAVQA 435
Q Q A +A
Sbjct: 377 LRQVGLQAAQKA 388
>gi|168187555|ref|ZP_02622190.1| flagellin [Clostridium botulinum C str. Eklund]
gi|169294604|gb|EDS76737.1| flagellin [Clostridium botulinum C str. Eklund]
Length = 268
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 47/137 (34%), Gaps = 4/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + KL E SSG R++ AAD+AA +I + K+ LS
Sbjct: 3 IN-NALVLGTFSKLNKNIKKSERCNATASSGKRINKAADDAAGLTICESFKAQVRGLSQG 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
G S + M + ++ D + + E Q++ ++
Sbjct: 62 ERNTQEGLSLLQCVDGHMEGIQKDLQRMREMAIENATDTRTDEDREKAEKEFNQIKENIK 121
Query: 121 DIARGSSFNGENWLRTD 137
++ + FN D
Sbjct: 122 YVSDNAEFNKIKLFDKD 138
Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 32/97 (32%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ + + +D I + IGS SR+ + K + + R+ D
Sbjct: 171 NVLTRDEASKAIQSLDDAISKCVSQRVDIGSAMSRLESALNDGKNTNSSTTASLSRIEDI 230
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
DMA+ + L + + N T + L
Sbjct: 231 DMANAAMNLFKSDVLVKYTNAMVCHANQDTNNSMKLL 267
>gi|89214196|gb|ABD64410.1| flagellin [Bacillus thuringiensis serovar indiana]
gi|89214348|gb|ABD64486.1| flagellin [Bacillus thuringiensis serovar asturiensis]
Length = 219
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L ++ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRHSLNKEFQSLTEKIGYIGETTEFNDLSVFEGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IGHTINMMKHIPPSPTQHDIKIST 144
Score = 67.5 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRHSLNKEFQSLTEKIGYIGETTEFNDLSVFEGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ M + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTINMMKHIPPSPTQHDIKISTEQEARAAILKIEDALQSVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ + DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASLIEDADMAQEMSDFLKFKLLTEVA 219
>gi|89214382|gb|ABD64503.1| flagellin [Bacillus thuringiensis serovar kumamotoensis]
Length = 219
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+D+ A +I M + + S + A+A + +V+
Sbjct: 1 EHLATGKKLNHASDDPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNVL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRNSLNKEFQSLTEQIGYIDETTEFNDLSVFDGQNHPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVHISKSISPSPTQHDIKIST 144
Score = 70.2 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 64/218 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDDPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNVLQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRNSLNKEFQSLTEQIGYIDETTEFNDLSVFDGQNHPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + +++ + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVHISKSISPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGAMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFFKFKLLTEVA 219
>gi|319790134|ref|YP_004151767.1| flagellin domain protein [Thermovibrio ammonificans HB-1]
gi|317114636|gb|ADU97126.1| flagellin domain protein [Thermovibrio ammonificans HB-1]
Length = 285
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 70/200 (35%), Gaps = 3/200 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N+ A L + +R+++G R++ AAD+AA IA +K+ +L
Sbjct: 5 INYNYQADFTHFNLMQTEQAMNKALERLATGYRINRAADDAAGLYIADQLKTYAVSLEQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ G S IA+A + ++++ IK K D K IQ +I +L +
Sbjct: 65 TRNSQDGISIAQIAQASLQNVYNILNDIKTKAIEAANDSQDDATRKIIQQDINKLVDVIS 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + FNG+N T + T + + D + +S
Sbjct: 125 KIFSDTEFNGKNIFTTTTNTFTIHYGGRSGQTLVMSIWTATAAAAADTNAPSTVTIGKTS 184
Query: 181 TDGTERYGLLDRNHKIKVEP 200
++
Sbjct: 185 YTIDVTSQTKAEAAIQNIDN 204
Score = 77.1 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 42/127 (33%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ ++ + + T+ I + + T + E + ID IK
Sbjct: 148 HYGGRSGQTLVMSIWTATAAAAADTNAPSTVTIGKTSYTIDVTSQTKAEAAIQNIDNLIK 207
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
KIGS + + R V++ R+ + D A E + + Q Q +
Sbjct: 208 AVDQLNAKIGSYQIELEKIVTNNESQRINVQEAESRIRNVDFAKEMSEFTRDQILMQSGM 267
Query: 434 QALSIVN 440
LS N
Sbjct: 268 AMLSQAN 274
>gi|89214332|gb|ABD64478.1| flagellin [Bacillus thuringiensis serovar sotto]
Length = 219
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNNASDNPANVAIVTRMHARASGMRVTIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IGHTINMTKHIPPSPTQHDIKIST 144
Score = 67.5 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNNASDNPANVAIVTRMHARASGMRVTIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +GS+ +R+ +
Sbjct: 122 GHTINMTKHIPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRTDLGSMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIGDADMAQEMSDFLKFKLLTEVA 219
>gi|89214308|gb|ABD64466.1| flagellin [Bacillus thuringiensis serovar galleriae]
Length = 219
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + + +
Sbjct: 1 EHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNTL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSSNGTNSNKNRHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+I Q
Sbjct: 121 IGHMINMTKHIPPSPTQHDIKIST 144
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/218 (10%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + ++
Sbjct: 2 HLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNTLQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++ + T T + + + L
Sbjct: 62 RMRDLAVQSSNGTNSNKNRHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHMINMTKHIPPSPTQHDIKISTEQEARAAILKIEDALQSVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ + DADMA E + + ++A
Sbjct: 182 NLNNQSMALTDAASLIEDADMAQEMSDFLKFKLLTEVA 219
>gi|24374751|ref|NP_718794.1| flagellar hook-associated protein FlgL [Shewanella oneidensis MR-1]
gi|24349415|gb|AAN56238.1|AE015761_8 flagellar hook-associated protein FlgL [Shewanella oneidensis MR-1]
Length = 403
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/420 (10%), Positives = 98/420 (23%), Gaps = 50/420 (11%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
V +++SSG +V+ + D+ + N + I ++++ + ++
Sbjct: 20 QTATSKVLEQLSSGKKVNTSGDDPVAALGIDNLNQRNALVDQFMKNIDYANNRLAVTESK 79
Query: 81 MSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+ A D+ +I+ + G ++ + I E+ +L +A +G
Sbjct: 80 LGSAEDLTGSIREQLMRAVNGTLSDSERQMIADEMKDSLKELLSLANSKDESGNYLFSGF 139
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ I ++ + + L
Sbjct: 140 STDKQPFAFDNSTPPKIVYSGDSGVRDSLVQSGVAIGTNIPGDQAFMKAPNGLGDYSVNY 199
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ Q + A S N + V A
Sbjct: 200 LASQQGDFKVQTAKIADQATYVADTYTFNFSDNGAGGVNLQVLDSANNPVANVTNFDATT 259
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ +
Sbjct: 260 PVSFNG-----------------------------------------------IEVKIDG 272
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
+ + I S I ++ K + ++++ ID+ + ++
Sbjct: 273 KPSAGDSFSMEPQSEVSIFDTISNAIALIEDPNVANSPQGKAQLAQILNNIDSGVNQMSS 332
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
A G+ + +D + + L D D AS T Q S
Sbjct: 333 ARSVAGNNLKTVERYKDTHTEEKVVNTSALSLLEDLDYASAITEFEKQQLALNAVSNVFS 392
>gi|218675471|ref|ZP_03525140.1| flagellin C protein [Rhizobium etli GR56]
Length = 293
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 74/138 (53%), Positives = 93/138 (67%)
Query: 9 SAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
SA +A Q LR++N NL Q+ VSSG RV A+DNAAYWSIA M+SDN ALSAVSDA+G
Sbjct: 1 SAQAALQTLRNVNQNLNSTQNHVSSGYRVEKASDNAAYWSIATTMRSDNKALSAVSDALG 60
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSF 128
+G++KVD A M AIDV+ IK K+ A E G D +Q EI QLQ QL IA+ +SF
Sbjct: 61 VGAAKVDTAYTAMDSAIDVVGEIKAKLVAATESGVDKAKVQEEIGQLQQQLLSIAQSASF 120
Query: 129 NGENWLRTDLGSSTASIA 146
NGENW+ G+ + +
Sbjct: 121 NGENWVAGAAGTKSVVSS 138
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 47/105 (44%), Positives = 75/105 (71%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ ++ + ++ ++ +++ +K T+A +GS+S RI LQ++F+ + D+++ G
Sbjct: 189 SIYSMSITNFTAGQIQTALTNVESALKAMTSAGAALGSLSKRIDLQDNFVNALSDSIDSG 248
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
VGRLVDA+M ES+RLSALQTQQQLA+Q+LSI N+S+ ILSLFR
Sbjct: 249 VGRLVDANMEEESSRLSALQTQQQLAIQSLSIANSSSQNILSLFR 293
>gi|149773187|dbj|BAF64768.1| flagellar hook-associated protein L [Shewanella livingstonensis]
Length = 189
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%)
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
A +G++ +R++ + ++ V R+ D D ASE+ +L+ Q Q +
Sbjct: 115 DAQRADLGAVQNRMNFTISNLSNIQSNVSDARSRIQDVDFASETAQLTKQQILSQTSSAM 174
Query: 436 LSIVNNSTARILSLF 450
L+ N LSL
Sbjct: 175 LAQANQIPQTALSLL 189
>gi|291613045|ref|YP_003523202.1| flagellar hook-associated protein 3 [Sideroxydans lithotrophicus
ES-1]
gi|291583157|gb|ADE10815.1| flagellar hook-associated protein 3 [Sideroxydans lithotrophicus
ES-1]
Length = 408
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/439 (10%), Positives = 115/439 (26%), Gaps = 47/439 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ + L + + ++SSG R+ D + + + A + N +
Sbjct: 3 ISTSSIYNANISSLDTLQVQIAQTTQQISSGQRILDPSMDPVGAARAIELTLSNSTNTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE----RGTDSKSIQSEITQLQSQL 119
++ + ++ + ++ + + G T+ K++ +++ + L
Sbjct: 63 GANNTAATNSLSLSDGILQSVTSLLQSAHDTAVTGAGGNSLSDTNRKALATDLQGRLNDL 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + NG GS + + + DD + + D
Sbjct: 123 LGLANSTDGNGNYLYSGAQGSVQPFVNTAGGVVYQGDDVQRKMQVAPSRQISSSDSGADI 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G+ V
Sbjct: 183 FMRIRNGNGIFQAALGAANTGSGTISQGV------------------------------- 211
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ A + + + + + T +
Sbjct: 212 ------------VTNAALYSSNSYQVTFGAGGTTYSITDVTAGPPGVAVPGQTGVAYASG 259
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
N + T DT + T + + +++ + + + +
Sbjct: 260 QAISFNGIQFSITGTPAAGDTFNVTPSKNQSVFDTLNNLITALNTPLAGASAATIAANSQ 319
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
AM + ++ ++ + GS + + + + +K + + D D
Sbjct: 320 AMSDGINALNQDLNSVLGVRATTGSRLNELTALQSTGTDLGLQYQKTLSTIQDTDYNKAI 379
Query: 420 TRLSALQTQQQLAVQALSI 438
T LS + Q A Q+ +
Sbjct: 380 TDLSQQKLILQAAQQSFAQ 398
>gi|240137730|ref|YP_002962202.1| hypothetical protein MexAM1_META1p1031 [Methylobacterium extorquens
AM1]
gi|240007699|gb|ACS38925.1| conserved hypothetical protein with putative Flagellin C-terminal
domain [Methylobacterium extorquens AM1]
Length = 399
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 66/450 (14%), Positives = 132/450 (29%), Gaps = 53/450 (11%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+S+ + + L+D + Q+R+++GL+VS A DN + AQ S +G L+
Sbjct: 3 SSVTLSAATRQNLLSLQDTSALTATTQNRLATGLKVSSALDNPVNFFTAQSFNSRSGDLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
++ D+I G + A G++ ++ + K+ + + +
Sbjct: 63 SLLDSISNGIQTIQAANQGITSIQKLIDSAKSTANQALSTQITTTGTAA----------- 111
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
F + + SST
Sbjct: 112 -----------------------------SDFAASTTSATTVNFFVNGATKTASIATSST 142
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
L V ++ +T + A A +A A
Sbjct: 143 IDAAITALNTAAGSTMFSKDTTGKKIVLNASSAVEFATTTGQTALGFAAGTGSATADKYG 202
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
S + + + + + + + S
Sbjct: 203 TGNTVASNSANLTISGVETRAKLAEQYNSLLIQITQLAKDSSFNGVNLISNSDPSNKLHI 262
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ A + + + L S +G L+
Sbjct: 263 TFNERDTANLDVQGKDLTADGLLLTSITGNSGATANGQGNFLLDTDIKGT---------- 312
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ + +A+ GS S + ++DF K + + ++ G L +AD+ E+
Sbjct: 313 ---LTKLTAGSDTLRSASSTFGSNLSVVQNRQDFTKRLVNILDTGASNLTNADLNEEAAN 369
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
AL T+Q L + ALS+ N + IL L R
Sbjct: 370 SQALSTRQSLGISALSLANQAQQGILQLLR 399
>gi|299536008|ref|ZP_07049327.1| flagellar hook-associated protein 3 [Lysinibacillus fusiformis ZC1]
gi|298728613|gb|EFI69169.1| flagellar hook-associated protein 3 [Lysinibacillus fusiformis ZC1]
Length = 331
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 59/166 (35%), Gaps = 3/166 (1%)
Query: 19 DINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAK 78
+ +QD+++SG +++ +D+ + D G + + + ++ +D
Sbjct: 18 RSYGRMSKLQDQLNSGKKITRPSDDPVIAVKGMGYRRDLGRVEQYTRNMNEVNNWIDTTD 77
Query: 79 AGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+++ + M ++ + + I+ EI Q++ Q++D++ + +
Sbjct: 78 ESLNQVGEQMKRVRELVIQAANDTNTPDERAKIKKEIDQIRQQIQDVSNTKIGDRYIFSG 137
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
T+ A + N Q+ + L +
Sbjct: 138 TNTDKPLFVDANPPNADGSKIINADYQLYDGTNIISTAADKLTAPN 183
Score = 49.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/259 (7%), Positives = 51/259 (19%)
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
++ T + + V T +
Sbjct: 59 VEQYTRNMNEVNNWIDTTDESLNQVGEQMKRVRELVIQAANDTNTPDERAKIKKEIDQIR 118
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
+ + + + + + +T +
Sbjct: 119 QQIQDVSNTKIGDRYIFSGTNTDKPLFVDANPPNADGSKIINADYQLYDGTNIISTAADK 178
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+T+ V + + K +
Sbjct: 179 LTAPNADVQIEVYDGIQLQVNAPGADLFGNIDSLMGKISNLLDPERVPGPATSEEISKAL 238
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
I +G+ +R+ L E+ + L +V K + D D +
Sbjct: 239 GGFTSNSKSDDITNIHNKILETQADMGARQNRVELMENRLSLREISVTKQLSNNEDVDYS 298
Query: 417 SESTRLSALQTQQQLAVQA 435
T + ++ Q A+
Sbjct: 299 KAITEMVTSESIHQAALSV 317
>gi|89214244|gb|ABD64434.1| flagellin [Bacillus thuringiensis serovar oswaldocruzi]
Length = 219
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + ++++
Sbjct: 1 EHLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQNVMNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNITKHIPPSPTQHDIKIST 144
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 61/218 (27%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + +
Sbjct: 2 HLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQNVMNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +GS+ +R+ +
Sbjct: 122 GHTVNITKHIPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGSMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|260436995|ref|ZP_05790811.1| flagellin [Butyrivibrio crossotus DSM 2876]
gi|292810603|gb|EFF69808.1| flagellin [Butyrivibrio crossotus DSM 2876]
Length = 98
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 36/96 (37%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + + I + ++ + +G+ +R+ + + + + D DM
Sbjct: 3 SNDDNARKAIDTIASALQEVSKQRSALGAAQNRLEHTIANLDNVVENTTSAESSIRDTDM 62
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+E + S Q L+ N S +LSL +
Sbjct: 63 ATEMVKYSNNNILAQAGQAMLAQANQSNQGVLSLLQ 98
>gi|197104853|ref|YP_002130230.1| flagellin FljL [Phenylobacterium zucineum HLK1]
gi|196478273|gb|ACG77801.1| flagellin FljL [Phenylobacterium zucineum HLK1]
Length = 278
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 3/219 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN SA+ A Q L N L VQ+R+++GL++S+A DNAA W+IAQ ++D GAL A
Sbjct: 4 SVHTNKSALIALQNLNKTNDQLSDVQNRINTGLKISNAKDNAAIWAIAQGQRADIGALGA 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQL 119
V ++ S +++ A D+M +K K+ A ++ + ++ S+ L Q+
Sbjct: 64 VRMSLERAHSIAEVSMAAGESVSDLMVQLKEKVVAAMDTSLDASSRTALDSDFKALLRQI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ + + F+G N L LG+S +A + S I + + + +
Sbjct: 124 SQVVQNAEFDGANLLDGSLGASIQFLANADANSKITLSTQNLSLGGSIISVAATASISTV 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+ L ++ L + +S
Sbjct: 184 TLATNVLTQLNTSLTQVNQALGNLGSQGKQIDAHLDFVS 222
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/98 (42%), Positives = 56/98 (57%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ ++T + A G +GS +I DF+ + D +E GVG LVDAD
Sbjct: 180 ISTVTLATNVLTQLNTSLTQVNQALGNLGSQGKQIDAHLDFVSKLTDVLEMGVGNLVDAD 239
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+A ES RL ALQ QQQL QALSI N + IL LFRG
Sbjct: 240 LAKESARLQALQVQQQLGAQALSIANAAPQVILQLFRG 277
>gi|89214214|gb|ABD64419.1| flagellin [Bacillus thuringiensis serovar higo]
gi|89214256|gb|ABD64440.1| flagellin [Bacillus thuringiensis serovar novosibirsk]
Length = 219
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAGVERGTDSKS---IQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ +K+ + E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSSNGTNSNKNCHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IDHTINMTKHIPPSPTQHDIKIST 144
Score = 66.7 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 22/218 (10%), Positives = 63/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++ + T T + + + L
Sbjct: 62 RMRDLAVQSSNGTNSNKNCHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 DHTINMTKHIPPSPTQHDIKISTEQEARAALLKIEEALQSVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DA+MA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDAEMAQEMSDFLKFKLLTEVA 219
>gi|89214300|gb|ABD64462.1| flagellin [Bacillus thuringiensis serovar morrisoni]
gi|89214330|gb|ABD64477.1| flagellin [Bacillus thuringiensis serovar san diego]
Length = 219
Score = 87.9 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + ++++
Sbjct: 1 EHLATGKKLNHASDNPANIAIVTRMHARANGMRVAIRNNEDAISMLRTAEAALQTVMNIL 60
Query: 89 STIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAIQSANSTNSNKNRDSLNKEFQSLTEQISYIGETTEFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVHISKSIPPSPTQHDIKIST 144
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 64/218 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + +
Sbjct: 2 HLATGKKLNHASDNPANIAIVTRMHARANGMRVAIRNNEDAISMLRTAEAALQTVMNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAIQSANSTNSNKNRDSLNKEFQSLTEQISYIGETTEFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + ++ + + + + + I+ ++ + +G++ +R+H +
Sbjct: 122 GHTVHISKSIPPSPTQHDIKISTEQEARAAILKIEEALQSVSLHRADLGAMINRLHFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|330447929|ref|ZP_08311577.1| bacterial flagellin C-terminus family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328492120|dbj|GAA06074.1| bacterial flagellin C-terminus family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 261
Score = 87.9 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 3/179 (1%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
+R+S+G RV+ AAD+AA IA + + +S G S + A+ M + ++
Sbjct: 1 MERLSTGFRVNSAADDAAGLQIATRLDAQTRGMSVAMRNSQDGISMMQTAEGAMDEMTNI 60
Query: 88 MSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ + + T D ++ +E QL +L ++ +SF G++ L +
Sbjct: 61 VYRMNDLATQASNGTVSANDRVALDAEFQQLGEELANVMASTSFGGQDILTDAGSFGAGA 120
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
+ + V T + D T +
Sbjct: 121 VNFQIGTQSGDQLAVDVSTEVQAVNATIGTAGSLALGDLTSAANAQAALTTLTGANGEA 179
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/239 (14%), Positives = 62/239 (25%), Gaps = 6/239 (2%)
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
+ T + + A + T S A
Sbjct: 23 ATRLDAQTRGMSVAMRNSQDGISMMQTAEGAMDEMTNIVYRMNDLATQASNGTVSANDRV 82
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
+ + + TS G T A T + + +
Sbjct: 83 ALDAEFQQLGEELANVMASTSFGGQDILTDAGSFGAGAVNFQIGTQSGDQLAVDVSTEVQ 142
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ------IKCATAAAGKIGSISSRIHLQ 392
T+ + ++ + +K A +G+ +R+
Sbjct: 143 AVNATIGTAGSLALGDLTSAANAQAALTTLTGANGEAGLLKEIGDARSALGANINRLDHT 202
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ M + V GR+VDAD A ES+ ++ Q Q LS N +SL R
Sbjct: 203 ITNLGNMVENVSAAKGRIVDADFAVESSSMTKNQMLMQAGTTVLSQTNQLPGMAMSLLR 261
>gi|319650642|ref|ZP_08004782.1| flagellar hook-associated protein L [Bacillus sp. 2_A_57_CT2]
gi|317397823|gb|EFV78521.1| flagellar hook-associated protein L [Bacillus sp. 2_A_57_CT2]
Length = 286
Score = 87.9 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 50/140 (35%), Gaps = 3/140 (2%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
+ + + L + L+ +QD++S+ + + +D+ + ++D + + IG
Sbjct: 9 SNNMLRNLSNSYSRLDKLQDQISTQKKFTKPSDDPVAAMMGMNYRTDLNRIEQYTRNIGE 68
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGS 126
+ VD + K + + I+ K++ E+ QL+ L++I
Sbjct: 69 VRNWVDSTDDALDKGVLALQRIRELTLQASNGTLEGDQRKAVAEEVKQLKEHLQNIGDTQ 128
Query: 127 SFNGENWLRTDLGSSTASIA 146
+ +
Sbjct: 129 VGGKYIFNGNQTNVRPSESG 148
Score = 50.5 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 34/80 (42%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ A+ +M+ ID I +A +IG+ +R+ L ED + + + D DM
Sbjct: 193 SNDPAVGDMLENIDKNIDNFLSARAQIGAKQNRVDLMEDRLSQQEVFSTRILSDNEDIDM 252
Query: 416 ASESTRLSALQTQQQLAVQA 435
L+ ++ + A+
Sbjct: 253 EKAIIELTTQESIHRAALSV 272
>gi|313903611|ref|ZP_07837001.1| flagellar hook-associated protein 3 [Thermaerobacter subterraneus
DSM 13965]
gi|313466164|gb|EFR61688.1| flagellar hook-associated protein 3 [Thermaerobacter subterraneus
DSM 13965]
Length = 295
Score = 87.9 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 18/163 (11%), Positives = 49/163 (30%), Gaps = 3/163 (1%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
LR L Q++++SG RV +D+ + +++ + +
Sbjct: 13 LADLRRAQQRLSTFQNQLASGKRVQRPSDDPVATVDSLRLRARLAEVERLRANAQDARDW 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNG 130
+++ + + +A ++ + +IQ+E+ QLQ L ++A + +
Sbjct: 73 LEMTDSALDRATQILQRARELAVRAASGTLPDSSLQAIQAEVQQLQDHLLEVANSTLGDS 132
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE 173
+ + +
Sbjct: 133 YLFGGFGTQQPPFVADPASPSGVTYQGINGPIQREVAPGTTLT 175
Score = 47.8 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 34/71 (47%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ +D + ++G+ +RI L + +R E+ + + DAD+A + RLS
Sbjct: 211 IAALDQALDGLLRFRAEVGAKVNRIELGLYRMDEIRVDTEQLLSGVEDADIAETAMRLSV 270
Query: 425 LQTQQQLAVQA 435
Q + A+ A
Sbjct: 271 SQAAYRAALMA 281
>gi|310816820|ref|YP_003964784.1| flagellin protein [Ketogulonicigenium vulgare Y25]
gi|308755555|gb|ADO43484.1| flagellin protein [Ketogulonicigenium vulgare Y25]
Length = 206
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 47/143 (32%), Positives = 78/143 (54%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN+ AM A Q L+ N L VQ +S+G V+++ DNAA W+I+++M+SD
Sbjct: 1 MSSILTNNGAMVALQTLKATNSALTNVQAEISTGKSVANSKDNAAVWAISKVMESDVQGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+A+ D + LG S V +A+ + ++ IK+ I D +Q+ I Q+R
Sbjct: 61 TAIQDTLSLGESTVSVARQAAESITERLNAIKDNIVNAQTANVDRAKLQTAIDADIEQIR 120
Query: 121 DIARGSSFNGENWLRTDLGSSTA 143
+I + F+G N + +S+
Sbjct: 121 NIVSTAQFSGMNLIDGSTTTSSF 143
>gi|254711827|ref|ZP_05173638.1| flagellin family protein [Brucella ceti M644/93/1]
gi|254714896|ref|ZP_05176707.1| flagellin family protein [Brucella ceti M13/05/1]
gi|261216585|ref|ZP_05930866.1| flagellin [Brucella ceti M13/05/1]
gi|261319455|ref|ZP_05958652.1| flagellin [Brucella ceti M644/93/1]
gi|260921674|gb|EEX88242.1| flagellin [Brucella ceti M13/05/1]
gi|261292145|gb|EEX95641.1| flagellin [Brucella ceti M644/93/1]
Length = 221
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 1/204 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SILTN SA++A Q L N +LE Q+R+S+GLR+S+A+DNA+YWSIA MKSDN A
Sbjct: 1 MASILTNSSALTALQTLASTNKSLESTQNRISTGLRISEASDNASYWSIATSMKSDNKAN 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE-RGTDSKSIQSEITQLQSQL 119
SAV DA+GLG+ KVD A + ++K + + IK K+ + + D I++EI + + +
Sbjct: 61 SAVQDALGLGAGKVDTAYSAINKIRESVDDIKTKLVSAMGASTEDKGKIETEIKSIVANI 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+++ G N L + + G+ + D V+ T D + ++
Sbjct: 121 NSALSNANYAGSNLLNGPTTDLNVVASYNRSGNAVTVDKITVKATDTDAKTMVKDIVDAG 180
Query: 180 STDGTERYGLLDRNHKIKVEPQVL 203
+
Sbjct: 181 FFTSASDDTAIGTALNTVETALAS 204
>gi|92114091|ref|YP_574019.1| flagellar hook-associated protein FlgL [Chromohalobacter salexigens
DSM 3043]
gi|91797181|gb|ABE59320.1| flagellin-like protein [Chromohalobacter salexigens DSM 3043]
Length = 410
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 47/451 (10%), Positives = 114/451 (25%), Gaps = 49/451 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + N V +++SG RV + +D+ + A + +
Sbjct: 3 ISTVTMYEQGVSAMNRQQQNFMDVGQQIASGKRVVNPSDDPRAAARAVSVSQSLAVNAQQ 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ + + ++ ++ D + + K+ + D +S+ S++ L
Sbjct: 63 ESSRVTARNSLSQEESVLNSVSDAIGSAKSLVVQAGNGTLSDADRESLASDLEGAFETLV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + NG ++ A + Q + +
Sbjct: 123 GLANTTDGNGTYLFSGYQDNAKAFSRTDAGDAVDTISYEGDQGVKQQKIDAERLMKTSDT 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + ++ S D + + S + +
Sbjct: 183 GTDVFMRFSAGSEYIAEADEGNTGNVTFSGPDVRDADAAGYGETFDISFNGDGTYDISSS 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A V + P+ S T G+
Sbjct: 243 GAGFADQTNVAYTDGETIEFGGMALTLEGEPAAGDSFTVTPGGDMS-------------- 288
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
++ G ++ L + D
Sbjct: 289 ---------------------------QEQASLFKTIGDTINALRQPVETDADQAALDNT 321
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ +D + +G+ + + +D A E+ LVD D + +
Sbjct: 322 LSTASRKLDASLDNVLTTRASVGARMNELDALDDVGGNREIAYEQTRSDLVDLDYNTAIS 381
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
Q Q + ++ + + +SLF+
Sbjct: 382 DYMLSQVGLQASQKSFADIQQ-----MSLFQ 407
>gi|303248232|ref|ZP_07334495.1| flagellar hook-associated protein 3 [Desulfovibrio fructosovorans
JJ]
gi|302490370|gb|EFL50281.1| flagellar hook-associated protein 3 [Desulfovibrio fructosovorans
JJ]
Length = 507
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 48/488 (9%), Positives = 122/488 (25%), Gaps = 68/488 (13%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T I N++++ L ++ S+ R++ +D+ ++D L
Sbjct: 13 TVINQNNASL----------ARLMATNEQASTQKRINAPSDDPNGAVQVLGTRTDLSQLG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQS---Q 118
I ++ A + +S +++TIK+ ++ TQ++ Q
Sbjct: 63 QYQSNITSAKGWLNQADSTLSSTSTLITTIKSYAEQAATGTVTQENRNEIATQIRQYFGQ 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD--------------------- 157
L +A + + ++ + + + D
Sbjct: 123 LISLANTTYNGDSIFAGQKTNTAAYTQGLWMNSNDATFDAAVSASGGFAISGGSDETVLV 182
Query: 158 --NGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASG 215
G + + + ++ + +
Sbjct: 183 QFMGTDPTNYQPAFQYSSDGGTTWNNGTYATAPGASSQTLNLGSGLTMDLDANALTNVTA 242
Query: 216 TISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAA 275
+Q + ++ A A+ + T + +
Sbjct: 243 CADHNDSDGTWMWIRPTAVYQGNTNQDVTVFSVDTGGGTATASASGTFSGNVMVRMDDTS 302
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
Y ++D T N+ ++ T V T + +I
Sbjct: 303 GPQYQYSYSTDGGTSWVTGNTSSNIGPPTTLAVPGGLLTITAGAPADGDQFFIQPSTADI 362
Query: 336 DSGYSMVTLNITRH--------------------------------ANTDAYNEKLAMEE 363
G S + N + ++
Sbjct: 363 PIGISPTDSVVVNGVGTEIFGGIDNNRAVTFSGSNAGNLFETVGKLVGYLETNNQHGIQN 422
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ + AA +G+ +R+ + +++ + + DAD+ + T LS
Sbjct: 423 CLDDLTASQNQVLVAASSVGARENRVTSAGTMVTTLQENATSTLSNVEDADLTALITTLS 482
Query: 424 ALQTQQQL 431
+ Q
Sbjct: 483 EQELAYQA 490
>gi|89214242|gb|ABD64433.1| flagellin [Bacillus thuringiensis serovar palmanyolensis]
Length = 219
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANIAIVTRMHARASDMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IGHTINMTKHIPPSPTQHDIKIST 144
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 61/218 (27%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A + A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANIAIVTRMHARASDMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +GS+ +R+ +
Sbjct: 122 GHTINMTKHIPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRTDLGSMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|83944172|ref|ZP_00956628.1| hypothetical protein EE36_02533 [Sulfitobacter sp. EE-36]
gi|83845039|gb|EAP82920.1| hypothetical protein EE36_02533 [Sulfitobacter sp. EE-36]
Length = 271
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 59/144 (40%)
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
T V + + + I + ++
Sbjct: 128 RMATSTTPNAVTLVNGVKRDSSGFGTTTYTFDGVDLGAIKTAMEAINVETSTDLAADLAT 187
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+ ++ + AA +G + + Q +FI + D ++ GV +VDADM E+ RL A Q
Sbjct: 188 AEGELANSITAATSLGITENALEGQMEFIDSLTDTLDSGVSSMVDADMEEEAARLQAYQV 247
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
QQQLA Q+LSI N + ILSLFR
Sbjct: 248 QQQLATQSLSIANQAPQNILSLFR 271
Score = 69.8 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 41/195 (21%), Positives = 83/195 (42%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M+A L+D+N L Q RVS+GL+V+ DNAAY+++++ MK D+G A+++ +
Sbjct: 1 MNALATLKDVNRGLNDTQSRVSTGLKVASGKDNAAYFAVSETMKGDSGMFKAINEGMTAT 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ V A+ G D+ I ++ G + +Q EI L + ++FNG
Sbjct: 61 KNSVATARLGAETVSDIAQQIVERVAFAQTDGVNRADVQLEIDALVENMGTAIEQATFNG 120
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+N + +++ + + + ++ D+ TT + + +
Sbjct: 121 DNLVDGTRMATSTTPNAVTLVNGVKRDSSGFGTTTYTFDGVDLGAIKTAMEAINVETSTD 180
Query: 191 DRNHKIKVEPQVLKD 205
E ++
Sbjct: 181 LAADLATAEGELANS 195
>gi|162532594|gb|ABY16696.1| FlaB [Arcobacter butzleri]
Length = 307
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + N N+ +++S+GLR++ AAD+A+ +IA +++ +++
Sbjct: 3 INTNVSSLTAQEAAVNTNKNISTSLEKLSTGLRINKAADDASGLAIADKLRTQATSINQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ + I M++ ++ TIK+K+ T +I +IT+L QL
Sbjct: 63 ISNGNSAVALLQITDKSMAEQSTILDTIKSKLIQANTDTTSVAGRTAIAKDITKLLQQLN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
+I +++NG N L+ ++ AS
Sbjct: 123 NIGEQTNYNGTNLLQNARTTANAST 147
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 36/111 (32%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
++ A T + + ID I G IGS +++ +
Sbjct: 197 GAKMSAGATAGTTGVFTRTMAQSGQKAIDKAITTLNGYRGDIGSTQNQVESAIRNLSTQA 256
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + D D A ES + L Q A+S N +L L +
Sbjct: 257 TNIKNAESVIRDVDYAQESANFNKLNIISQAGSYAISQANAVQQNVLKLLQ 307
>gi|283850814|ref|ZP_06368100.1| flagellar hook-associated protein 3 [Desulfovibrio sp. FW1012B]
gi|283573737|gb|EFC21711.1| flagellar hook-associated protein 3 [Desulfovibrio sp. FW1012B]
Length = 518
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 52/489 (10%), Positives = 116/489 (23%), Gaps = 72/489 (14%)
Query: 15 QKLRDINYNLEVVQD---RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+ N L + + + S+ R++ +D+ ++D L I +
Sbjct: 13 NVISQNNAALSRLMETNNQASTQKRINAPSDDPNGAVTVLNTRADIDQLGQYKRNITTAN 72
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSF 128
++ A + ++ +++TIK G + I S + Q QL A +
Sbjct: 73 GWLNQADSTLTSVSTLITTIKGYAEQGATGTITDENRGEIASAVRQYFQQLISQANTTYS 132
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDD------------------------------- 157
+ + + + + D
Sbjct: 133 GNSLFAGQKTDTEAFTEGLGMTSNDTAFDTALAAWPNPGYTVEGDTDSTVLVQFTDTTAS 192
Query: 158 -----NGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYD 212
T T + T L + + D S
Sbjct: 193 PPAFEYTADGGQTWTAGTYSATPAAGTQTLQMGGVNLTMSDGALAAAKASANHEDSSGTW 252
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ A A NA A+G + V + T S S
Sbjct: 253 LWIRPAAYYQGNTKEDIAVTSANNAVVASAEGTFSGNVMVRVDDTTSGPTYSYSYSTDGG 312
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ + +T + + + + + DS
Sbjct: 313 TSWMTGNKSGLPGPPTSLSVPGGVLTLSGTPADGDQFFIQPSTTDISLAISPTDSVVVNG 372
Query: 333 KEIDSGYSMVTLNITRH------------------------------ANTDAYNEKLAME 362
D + + N + +
Sbjct: 373 VGKDIFGGIYEKTVANPTPPPANVKLNQAATFNGSDAANLFETVGKLVGYLETNNQAGCQ 432
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
E + + + A +G+ +R+ + + + + ++ DAD+ + T+L
Sbjct: 433 EALDNLTASQQQILTTAASVGAKENRVTSAGTMVDTLAENSTTTLSKVEDADLTTLITKL 492
Query: 423 SALQTQQQL 431
S + Q
Sbjct: 493 SEQELAYQA 501
>gi|89214274|gb|ABD64449.1| flagellin [Bacillus thuringiensis serovar kim]
Length = 219
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 42/113 (37%), Gaps = 3/113 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNTASDNPANVAIVTRMYARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+++ + S+ E L Q+ I + FN +
Sbjct: 61 QRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNNLSVFDGQN 113
Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/218 (10%), Positives = 64/218 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNTASDNPANVAIVTRMYARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNNLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + ++ + + + + + I+ ++ + + ++ +R+ +
Sbjct: 122 GHTVHISKSIPTSPTQHDIKISTEQEARTAIRKIEEALQSVSLHRADLSAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|89214294|gb|ABD64459.1| flagellin [Bacillus cereus]
gi|89214302|gb|ABD64463.1| flagellin [Bacillus thuringiensis serovar pingluonsis]
Length = 219
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDALSMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNITKHIPPSPTQHDINIST 144
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDALSMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNITKHIPPSPTQHDINISTEQEARTAIRKIEEALQNVSLHRADLGAMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|89214194|gb|ABD64409.1| flagellin [Bacillus thuringiensis serovar sotto]
Length = 219
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNNASDNPANVAIVTRMHARASGMRVTIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 KRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IGHTINMTKHIPPSPTQHDIKIST 144
Score = 69.8 bits (168), Expect = 9e-10, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNNASDNPANVAIVTRMHARASGMRVTIRNNEDAISMLRTAEAALQTVTNILK 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +GS+ +R+ +
Sbjct: 122 GHTINMTKHIPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRTDLGSMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|89214280|gb|ABD64452.1| flagellin [Bacillus thuringiensis serovar entomocidus]
Length = 219
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 20/152 (13%), Positives = 50/152 (32%), Gaps = 3/152 (1%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + A +++
Sbjct: 1 EHLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTATNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ +E L Q+ I+ + FN + T
Sbjct: 61 QRMRDLAVQSTNGTNSNKNRDSLNTEFQSLTEQIGYISETTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ Q + +
Sbjct: 121 ISHTVHMTKHIPPSPTQHDIKISTEQEASAAI 152
Score = 66.7 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 65/218 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTATNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T T + + + L
Sbjct: 62 RMRDLAVQSTNGTNSNKNRDSLNTEFQSLTEQIGYISETTEFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + + I+ ++ + +GS+ +R+ +
Sbjct: 122 SHTVHMTKHIPPSPTQHDIKISTEQEASAAILKIEEALQNVSLHRADLGSMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ V ++ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAVSQVEDADMAQEISDFLKFRLLTEVA 219
>gi|238025293|ref|YP_002909525.1| flagellin [Burkholderia glumae BGR1]
gi|37360924|dbj|BAC98371.1| flagellin [Burkholderia glumae]
gi|237879958|gb|ACR32290.1| Flagellin [Burkholderia glumae BGR1]
Length = 384
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 51/297 (17%), Positives = 95/297 (31%), Gaps = 3/297 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 1 MLGINTNVNSLVAQQNLNGSQSALSQAITRLSSGNRINSAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQS 117
+ S + + +S + I T G +D + + E+ Q
Sbjct: 61 NQGVQNTNDAVSLIQTTSSQLSSLTSSLQRISTLATEAATGTLSSSDQAAAEKEVAQQIQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA ++FNG+N L G T I +V + D + + I L +
Sbjct: 121 EVNRIASQTNFNGKNLLDGSAGILTFQIGANVGQTVSLDLSQSLSAAKIGGGLVQAGTNV 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
S + + V D + + + + A
Sbjct: 181 GSIQNLSLDANGAATTAAQPAITSVNVLSDGKGGFSFTDQNGQALSATAVGAIFTTGTAA 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A T+ + ++ + + + + + A
Sbjct: 241 GTGTAVTNLTLATAATSGMTTAQASAAANMISQINAVNAPPTVSNVDISNTTSANQA 297
Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 49/138 (35%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T+ + T +T+ + + + +N + + + + + + +
Sbjct: 247 TNLTLATAATSGMTTAQASAAANMISQINAVNAPPTVSNVDISNTTSANQAIVSVANALS 306
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ + + ++ AD A E+ LS Q QQ +
Sbjct: 307 TINNLQATLGATQNRLQAIGQTQQANSTNLSSAQSQIQSADFAQETAALSKAQVLQQAGI 366
Query: 434 QALSIVNNSTARILSLFR 451
L+ N+ ++L L +
Sbjct: 367 SVLAQANSLPQQVLKLLQ 384
>gi|89214228|gb|ABD64426.1| flagellin [Bacillus thuringiensis serovar japonensis]
Length = 219
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAGVERGTDSKS---IQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ +K+ + E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSSNGTNSNKNCHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IGHTINMTKHIPPSPTQHDIKIST 144
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/218 (10%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++ + T T + + + L
Sbjct: 62 RMRDLAVQSSNGTNSNKNCHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTINMTKHIPPSPTQHDIKISTEQEARTAIRKIEEALQSVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ + DADMA E + + ++A
Sbjct: 182 NLNNQSMALTDAASLIEDADMAQEMSDFLKFKLLTEVA 219
>gi|163850676|ref|YP_001638719.1| hypothetical protein Mext_1246 [Methylobacterium extorquens PA1]
gi|254560302|ref|YP_003067397.1| hypothetical protein METDI1832 [Methylobacterium extorquens DM4]
gi|163662281|gb|ABY29648.1| conserved hypothetical protein [Methylobacterium extorquens PA1]
gi|254267580|emb|CAX23422.1| conserved hypothetical protein; putative Flagellin C-terminal
domain [Methylobacterium extorquens DM4]
Length = 399
Score = 87.5 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 66/450 (14%), Positives = 133/450 (29%), Gaps = 53/450 (11%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+S+ + + L+D + Q+R+++GL+VS A DN + AQ S +G L+
Sbjct: 3 SSVTLSAATRQNLLSLQDTSALTATTQNRLATGLKVSSALDNPVNFFTAQSFNSRSGDLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
++ D+I G + A G++ ++ + K+ + + +
Sbjct: 63 SLLDSISNGIQTIQAANQGITSIQKLIDSAKSTANQALSTQITTTGTAA----------- 111
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
F + + SST
Sbjct: 112 -----------------------------SDFAASTTTSTSVNFFVNGATKTATIATSST 142
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
L V ++ +T + A A +A A
Sbjct: 143 IDAAITALNTAAGSTMFSKDTTGKKIVLNASSAVEFATTTGQTALGFAAGTGSATADKYG 202
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
S + + + + + + + S
Sbjct: 203 TGNTVASNSANLTISGVETRAKLAEQYNSLLIQITQLAKDSSFNGVNLISNSDPSNKLHI 262
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ A + + + +L S +G L+
Sbjct: 263 TFNERDTANLDVQGKDLTADGLSLTSITGNSGATANGQGNFLLDTDIKGT---------- 312
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ + +A+ GS S + ++DF K + + ++ G L +AD+ E+
Sbjct: 313 ---LTKLTAGSDTLRSASSTFGSNLSVVQNRQDFTKRLVNILDTGASNLTNADLNEEAAN 369
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFR 451
AL T+Q L + ALS+ N + IL L R
Sbjct: 370 SQALSTRQSLGISALSLANQAQQGILQLLR 399
>gi|20807000|ref|NP_622171.1| flagellar hook-associated protein FlgL [Thermoanaerobacter
tengcongensis MB4]
gi|20515483|gb|AAM23775.1| Flagellin and related hook-associated proteins [Thermoanaerobacter
tengcongensis MB4]
Length = 296
Score = 87.5 bits (214), Expect = 5e-15, Method: Composition-based stats.
Identities = 21/156 (13%), Positives = 54/156 (34%), Gaps = 3/156 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N + + L+ Q+ +SSG + + +D+ + + +K+D A
Sbjct: 3 VTHNMMISTFLTDYYNNLERLQKGQNMLSSGKKFTRPSDDPVAVATSLRIKTDMARNDAY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLR 120
+ S ++I + +S+ D++ + G ++ EI QL++Q+
Sbjct: 63 TKNADDAKSWLEITDSALSQLGDLLQRTRELAVEGANGTLTQSDMEKIAQEIMQLKAQMV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRD 156
+ + ++ S +
Sbjct: 123 QVGNTQYNGRYIFAGFKTDTAPFSETANSYSGDDNF 158
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 34/66 (51%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ A+ M++ ID Q++ + ++G+ S+RI L ++ ++ + + DADMA
Sbjct: 204 DHQAVSSMIADIDKQLENVLSVRAEVGAKSNRIDLIQNRLQNDNYNFTALLSKNEDADMA 263
Query: 417 SESTRL 422
T L
Sbjct: 264 EVITNL 269
>gi|94958417|gb|ABF47346.1| flagellin [Bacillus thuringiensis serovar vazensis]
Length = 219
Score = 87.5 bits (214), Expect = 5e-15, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + ++++
Sbjct: 1 EHLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVMNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTGFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNVTKHISPSPTQHDIKIST 144
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + +
Sbjct: 2 HLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVMNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTGFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ ++ + + + + + I+ ++ + +GS+ +R+ +
Sbjct: 122 GHTVNVTKHISPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGSMINRLQFNTE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|89214198|gb|ABD64411.1| flagellin [Bacillus thuringiensis serovar silo]
Length = 219
Score = 87.5 bits (214), Expect = 5e-15, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +S+G ++S A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLSTGKKLSHASDNPANIAIVTRMHARASGMRVAIRNNEDALSMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAGV---ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T +
Sbjct: 61 HRMRDLAVQSANYPNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFGGQNRPVTLND 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVHISKSIPPSPTQHDIKIST 144
Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/215 (10%), Positives = 65/215 (30%)
Query: 218 STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASA 277
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 5 TGKKLSHASDNPANIAIVTRMHARASGMRVAIRNNEDALSMLRTAEAALQTVTNILHRMR 64
Query: 278 TYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
+ + T T + + + L +
Sbjct: 65 DLAVQSANYPNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFGGQNRPVTLNDIGHT 124
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
+ ++ + + + + + I+ ++ + +G++ +R+ L + +
Sbjct: 125 VHISKSIPPSPTQHDIKISTEQEARTAIRKIEEALQSVSLHRADLGAMINRLQLNIENLN 184
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A+ ++ DADMA E + + ++A
Sbjct: 185 SQSMALTDAASQVEDADMAQEMSDFLKFKLLTEVA 219
>gi|28897560|ref|NP_797165.1| flagellar hook-associated protein FlgL [Vibrio parahaemolyticus
RIMD 2210633]
gi|260364618|ref|ZP_05777220.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus K5030]
gi|260878277|ref|ZP_05890632.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus
AN-5034]
gi|260898107|ref|ZP_05906603.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus
Peru-466]
gi|260901961|ref|ZP_05910356.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus
AQ4037]
gi|551518|gb|AAD10270.1| hook-associated protein type 3 [Vibrio parahaemolyticus]
gi|28805772|dbj|BAC59049.1| hook-associated protein type 3 FlgL [Vibrio parahaemolyticus RIMD
2210633]
gi|308086120|gb|EFO35815.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus
Peru-466]
gi|308090194|gb|EFO39889.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus
AN-5034]
gi|308106762|gb|EFO44302.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus
AQ4037]
gi|308115100|gb|EFO52640.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus K5030]
Length = 397
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 49/434 (11%), Positives = 113/434 (26%), Gaps = 52/434 (11%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T I + H+ S LR + Q++++SG ++ +D+ Q + L
Sbjct: 3 TRISSFHNYQSVQNDLRRQENKIHHNQEQLASGKKLLKPSDDPLAAHYIQNIGQQQEQLK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
+I L ++++ + ++ A K + ++ Q++ + +L +
Sbjct: 63 QYLSSIVLVRNRLENHEVNIANAESFADESKRLTMEMINGAFSAEDRQAK----KRELEE 118
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA F + + G+ + K F R
Sbjct: 119 IANN--FLNLVNAQDESGNYVFAGTKPKSQPFYR-------------------------- 150
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
D++ ++ + ++ KL ++D
Sbjct: 151 ---------DKDGSVQYAGDDYQRKMKVSSMLDMPMNDPGSKLFMEIPNPFGDYQPSYDL 201
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
G + A + + + R G + + I
Sbjct: 202 QSGSDLLLSKATNVDAKDTASYRVTFVDMNNGKFGYQLERNGKVVDADEFSPEKGIEYKG 261
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ ++ + S S+ + +
Sbjct: 262 LKVHVKGQITPGDSIGIEKRESFSIFDTFKEAMSWSDKSVS-----------DTSATAKL 310
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+M A +G+ S + +QE + ++ K D D +
Sbjct: 311 HQMTEEFQAAFIHLNKARTDVGARLSTLDIQEQNHEDFNLSLAKAKSNFEDLDYSKAVIE 370
Query: 422 LSALQTQQQLAVQA 435
S Q + QA
Sbjct: 371 FSENSRALQASQQA 384
>gi|163794167|ref|ZP_02188140.1| flagellin domain protein [alpha proteobacterium BAL199]
gi|159180781|gb|EDP65300.1| flagellin domain protein [alpha proteobacterium BAL199]
Length = 273
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 3/221 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SILTN A+ A + L N +L+V Q+RVS+GL+V+ A D+A+ ++IAQ ++ D AL A
Sbjct: 5 SILTNPGALIALRNLERTNRSLDVTQNRVSTGLKVTGAIDDASNFAIAQGIRGDIKALGA 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
V + +A AG + D++ T++ K+T T ++ + QL SQ
Sbjct: 65 VVQGLNNAKGIAKVAIAGTTSISDLLQTVRQKLTEMSNEGITTTQRLILEEDFAQLLSQA 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ + FNG N L + + + + + + Q+ + L +
Sbjct: 125 ANFIDNAVFNGVNLLDSSSSNVNTLSNINGGTLTLTFQDLRTQVLALAGSSFGSATLAQA 184
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
N + + +++
Sbjct: 185 VLSSEFTDLQSVVNTALGSLGAEARALELQTTFLEEITDAT 225
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
A G +G+ + + LQ F++ + DA E+G+G +VDADMA ES RL+ALQ +QQL
Sbjct: 194 QSVVNTALGSLGAEARALELQTTFLEEITDATEEGLGNIVDADMARESARLTALQVRQQL 253
Query: 432 AVQALSIVNNSTARILSLFR 451
VQ L I N + +L LF+
Sbjct: 254 GVQVLGIANQAPQILLGLFQ 273
>gi|116694226|ref|YP_728437.1| flagellar hook-associated protein FlgL [Ralstonia eutropha H16]
gi|113528725|emb|CAJ95072.1| flagellar hook-associated protein 3 [Ralstonia eutropha H16]
Length = 409
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/428 (10%), Positives = 104/428 (24%), Gaps = 44/428 (10%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ +L +Q ++ +G + +D+ + A + + + +
Sbjct: 13 LASMNYQQGSLLHIQQQLGTGRSILTPSDDPVGATRALGVSQAQAVNGQYATSRKQANIA 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNG 130
+ + + V I+ + D S+ + + L +QL +A NG
Sbjct: 73 LAAEENALQSVTTVTQNIQTLLVQAGNGTMSDADRGSLATALEGLYNQLVGLANSDDGNG 132
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+ S G++I D+ ++ + + + T G +
Sbjct: 133 QYLFGGTRSGSAPFTQSKGPGAYIGDNGQQLLQVDVARQMPAGNTGREVFMSVTGGAGYV 192
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
+ +
Sbjct: 193 VKGNANNTGSAT-----------------------------------------FGTVSTT 211
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
+ + + S + + T + G + V +
Sbjct: 212 NPSDPDYGLSMQVTFAANASGQMEYTITDLSAGTTPAPVVKGPIAYTSPAHIDVAGVSFN 271
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
V DT + S + + TL ++D + +
Sbjct: 272 VTGDPKDGDTMTMAPASEAGTDMFANLQTVIDTLRQPTPDSSDRAHLGNVISTATRQFSN 331
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ +GS + + +D + + L D D A T QT Q
Sbjct: 332 SLDNVLTVRASVGSRMNELDALDDVGSNRDLTYSQTLSGLQDLDYAKAITEYYQRQTALQ 391
Query: 431 LAVQALSI 438
A Q+
Sbjct: 392 GAQQSFMQ 399
>gi|302878309|ref|YP_003846873.1| flagellin domain-containing protein [Gallionella capsiferriformans
ES-2]
gi|302581098|gb|ADL55109.1| flagellin domain protein [Gallionella capsiferriformans ES-2]
Length = 238
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/236 (16%), Positives = 76/236 (32%), Gaps = 5/236 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN S++ SQ L N L+ R+SSGLR++ A D+A IA S +
Sbjct: 4 VINTNVSSLFTSQALNKSNLGLQTAMQRLSSGLRINSAKDDATGLVIATGYDSQIRGSNQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
G S + ++ + ++ T E T L ++ I
Sbjct: 64 AIRNANDGISTAQTNEGYAAQITANVQRLREIAVQLGGTATG-----VETTALLAENSRI 118
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A S+ G + + G+ T + + + N + +TT+ + + +
Sbjct: 119 AGLSAATGSVVVNSSGGTVTGVGTAIAVPTGVTITNIDLNLTTLAAARANFGADMATFSS 178
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
N + D + + ++ A + A +
Sbjct: 179 AIANLQTTSVNLSAAYSRIMDTDYAAETANMTRNNILQQAGTAMLAQANQQPNQVM 234
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 35/87 (40%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ ID + AA G+ + ++ + R++D D A+E+ ++
Sbjct: 152 ITNIDLNLTTLAAARANFGADMATFSSAIANLQTTSVNLSAAYSRIMDTDYAAETANMTR 211
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
QQ L+ N ++++L R
Sbjct: 212 NNILQQAGTAMLAQANQQPNQVMTLLR 238
>gi|313610139|gb|EFR85453.1| flagellin [Listeria monocytogenes FSL F2-208]
Length = 95
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 43/93 (46%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN ++ + LR N + Q+R++SG R++ + D+AA ++ M + L A
Sbjct: 3 VNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT 96
S +G + A + +S ++ ++
Sbjct: 63 SKNSSMGIDLLQTADSALSSMSSILQRMRQLAV 95
>gi|16125710|ref|NP_420274.1| flagellin FljK [Caulobacter crescentus CB15]
gi|221234465|ref|YP_002516901.1| flagellin FljK [Caulobacter crescentus NA1000]
gi|10720396|sp|P18913|FLJK_CAUCR RecName: Full=Flagellin fljK; AltName: Full=25 kDa flagellin
gi|6997004|gb|AAC35989.2| flagellin FljK [Caulobacter crescentus CB15]
gi|13422830|gb|AAK23442.1| flagellin FljK [Caulobacter crescentus CB15]
gi|220963637|gb|ACL94993.1| flagellin fljK [Caulobacter crescentus NA1000]
Length = 273
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN AM A Q L N L VQ R+++G +++ A DN A W+ A+ + +++A
Sbjct: 5 SINTNAGAMIALQNLNGTNSELTTVQQRINTGKKIASAKDNGAIWATAKNQSATAASMNA 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQL 119
V D++ G S +D+A A D++ +K K A + ++ S + + L+ Q+
Sbjct: 65 VKDSLQRGQSTIDVALAAGDTITDLLGKMKEKALAASDTSLNTASFNALKSDFDSLRDQI 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
A + FNG + T G
Sbjct: 125 EKAATNAKFNGVSIADGSTTKLTFLANSDGSGFT 158
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 60/88 (68%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
M+ IDT ++ AT +G+ S + F+ ++D+++ GVG LVDAD+A ES +L
Sbjct: 186 MIGTIDTALQTATNKLASLGTSSVGLDTHLTFVGKLQDSLDAGVGNLVDADLAKESAKLQ 245
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
+LQT+QQL VQALSI N S++ ILSLFR
Sbjct: 246 SLQTKQQLGVQALSIANQSSSSILSLFR 273
>gi|89214326|gb|ABD64475.1| flagellin [Bacillus thuringiensis serovar tochigiensis]
Length = 219
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + G S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNGDAISMLRTAEAVLQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIDETTEFNDLSAFDGQSRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNITKHIPPSPTQHDIKIST 144
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 61/218 (27%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNGDAISMLRTAEAVLQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIDETTEFNDLSAFDGQSRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNITKHIPPSPTQHDIKISTEQEARASIRRIEEALQNVSLHRADLGAMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSLALTDATSRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|89214354|gb|ABD64489.1| flagellin [Bacillus cereus]
Length = 219
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 42/113 (37%), Gaps = 3/113 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+++ + S+ L Q+ I + FN +
Sbjct: 61 QRMRDLAVQSANGTNSNKNRHSLNKVFQSLTEQIGYIGETTEFNDLSVFDGQN 113
Score = 64.0 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 63/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + R L
Sbjct: 62 RMRDLAVQSANGTNSNKNRHSLNKVFQSLTEQIGYIGETTEFNDLSVFDGQNRRVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + ++ + + + + + I+ ++ + +GS+ +R+ +
Sbjct: 122 GHTVHISKSIPPSPTQHDIKISTEQEARTTIRKIEEALQSVSLHRADLGSMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ + D DMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASLIEDTDMAQEMSDFLKFKLLTEVA 219
>gi|89214210|gb|ABD64417.1| flagellin [Bacillus thuringiensis serovar muju]
Length = 219
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAVLQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIDETTEFNDLSAFDGQSRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNITKHIPPSPTQHDIKIST 144
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 61/218 (27%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAVLQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIDETTEFNDLSAFDGQSRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNITKHIPPSPTQHDIKISTEQEARASIRKIEEALQNVSLHRADLGAMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSLALTDATSRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|254467093|ref|ZP_05080504.1| flagellin domain protein [Rhodobacterales bacterium Y4I]
gi|206688001|gb|EDZ48483.1| flagellin domain protein [Rhodobacterales bacterium Y4I]
Length = 277
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 76/162 (46%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S N AM A Q L +N L QD +S+G ++ A DNAA W+I+++M SD L
Sbjct: 1 MISFHNNSGAMVALQTLGGVNSQLNQTQDSISTGQTINSAQDNAALWAISELMNSDISGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+VSD++ LG + V +A AG + + ++ +++ D ++ + + Q+
Sbjct: 61 RSVSDSLSLGEATVAVASAGAEQITETLTEMRSLAIMASSGMGDFSKYEAAMAKKTEQIN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
I S FNG N L+TD+ + + +
Sbjct: 121 SIISSSGFNGVNLLKTDVDGAGGTGLTVPSAISTDGSLSTLS 162
Score = 39.0 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 67/205 (32%)
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
A T S + S +S
Sbjct: 72 ATVAVASAGAEQITETLTEMRSLAIMASSGMGDFSKYEAAMAKKTEQINSIISSSGFNGV 131
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
N V T + + + L G N A + +
Sbjct: 132 NLLKTDVDGAGGTGLTVPSAISTDGSLSTLSVDGLDFEGSAQFDLGNRTAITDSASALTA 191
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ I+ + A + +GS ++++ Q D++ DA+ +GV ++D + +T+L A
Sbjct: 192 LGEIEGFLAYAIEGSAALGSSANQLAGQGDYVSKQSDALTRGVSSMIDTSIEEAATKLLA 251
Query: 425 LQTQQQLAVQALSIVNNSTARILSL 449
LQ QQQL+ +LSIVN + +L
Sbjct: 252 LQAQQQLSTVSLSIVNTMPDTLRNL 276
>gi|328473446|gb|EGF44294.1| flagellar hook-associated protein FlgL [Vibrio parahaemolyticus
10329]
Length = 397
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 49/434 (11%), Positives = 112/434 (25%), Gaps = 52/434 (11%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T I + H+ S LR + Q++++SG ++ +D+ Q + L
Sbjct: 3 TRISSFHNYQSVQNDLRRQENKIHHNQEQLASGKKLLKPSDDPLAAHYIQNIGQQQEQLK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
+I L ++++ + ++ A K + ++ Q++ + +L +
Sbjct: 63 QYLSSIVLVRNRLENHEVNIANAESFADESKRLTMEMINGAFSAEDRQAK----KRELEE 118
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA F + + G+ + K F R
Sbjct: 119 IANN--FLNLVNAQDESGNYVFAGTKPKSQPFYR-------------------------- 150
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
D++ ++ + ++ KL +D
Sbjct: 151 ---------DKDGSVQYAGDDYQRKMKVSSMLDMPMNDPGSKLFMEIPNPFGDYQPNYDL 201
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
G + A + + + R G + + I
Sbjct: 202 QSGSDLLLSKATNVDAKDTASYRVTFVDMNNGKFGYQLERNGKVVDADEFSPEKGIEYKG 261
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ ++ + S S+ + +
Sbjct: 262 LKVHVKGQITPGDSIDIEKRESFSIFDTFKEAMSWSDKSVS-----------DTSATAKL 310
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+M A +G+ S + +QE + ++ K D D +
Sbjct: 311 HQMTEEFQAAFIHLNKARTDVGARLSTLDIQEQNHEDFNLSLAKAKSNFEDLDYSKAVIE 370
Query: 422 LSALQTQQQLAVQA 435
S Q + QA
Sbjct: 371 FSENSRALQASQQA 384
>gi|89214350|gb|ABD64487.1| flagellin [Bacillus thuringiensis]
Length = 219
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANVAIVTRMHARTSGMRVAIRNNEDALSMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIDETTEFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNITKHIPPSPTQHDIKIST 144
Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 61/218 (27%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + + G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANVAIVTRMHARTSGMRVAIRNNEDALSMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIDETTEFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + K + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNITKHIPPSPTQHDIKISTKQEARAAIRKIEEALQNVSLHRADLGAMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|238024674|ref|YP_002908906.1| flagellin [Burkholderia glumae BGR1]
gi|237879339|gb|ACR31671.1| Flagellin [Burkholderia glumae BGR1]
Length = 384
Score = 87.1 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 51/297 (17%), Positives = 95/297 (31%), Gaps = 3/297 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +++ A Q L L R+SSG R++ AAD+AA +IA M++ L
Sbjct: 1 MLGINTNVNSLVAQQNLNGSQSALSQAITRLSSGNRINSAADDAAGLAIATRMQTQINGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQS 117
+ S + + +S + I T G +D + + E+ Q
Sbjct: 61 NQGVQNTNDAVSLIQTTSSQLSSLTSSLQRISTLATEAATGTLSSSDQAAAEQEVAQQIQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ IA ++FNG+N L G T I +V + D + + I L +
Sbjct: 121 EVNRIASQTNFNGKNLLDGSAGIVTFQIGANVGQTVSLDLSQSLSAAKIGGGLVQSGTNV 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + + V D + + + + A
Sbjct: 181 GTIQNLSLDANGAATTAAQPAITSVNVLSDGKGGFTFTDQNGQALSASAVGAIFTTGTAA 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A T+ + ++ + + + + N A
Sbjct: 241 GTGTAVTNLTLSTGATSGMTTAQASAAANMISQINSVNAPPTVSNVNISNTTSANQA 297
Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 50/138 (36%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T+ + T +T+ + + + ++N + + + + + I +
Sbjct: 247 TNLTLSTGATSGMTTAQASAAANMISQINSVNAPPTVSNVNISNTTSANQAIVSIANALS 306
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ + + ++ AD A E+ LS Q QQ +
Sbjct: 307 TINNLQATLGATQNRLQGIAQTQQANSTNLSSAQSQIQSADFAQETAALSKAQVLQQAGI 366
Query: 434 QALSIVNNSTARILSLFR 451
L+ N+ ++L L +
Sbjct: 367 SVLAQANSLPQQVLKLLQ 384
>gi|119715017|ref|YP_921982.1| flagellar hook-associated protein 3 [Nocardioides sp. JS614]
gi|119535678|gb|ABL80295.1| flagellar hook-associated protein 3 [Nocardioides sp. JS614]
Length = 305
Score = 87.1 bits (213), Expect = 6e-15, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 50/141 (35%), Gaps = 4/141 (2%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
+ A ++ L VQ+++S+G ++ +D+ + A ++S
Sbjct: 10 MMSRQALTGMQAGLNRLANVQEQLSTGRVINRPSDDPTGATSAMRLRSSVSDQKQYVRNA 69
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG----TDSKSIQSEITQLQSQLRDIA 123
G ++ + +S D + G G +++ EI Q++S L A
Sbjct: 70 DNGLGWLNQIDSTLSSITDQVRRAHEVALQGANTGSLGAEAREALAIEIDQIRSGLVSTA 129
Query: 124 RGSSFNGENWLRTDLGSSTAS 144
+ + GS+ +
Sbjct: 130 NATYLERPVFGGVTAGSAAYA 150
Score = 42.8 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 31/99 (31%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
V ++T A + A+ +D + T IG + R+
Sbjct: 195 GDSVFDHLTALAAALRAGDAAAITASAGILDADTRKVTNVQADIGVRTKRVEQARTAAND 254
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+ + + + DM + L + Q A+ A +
Sbjct: 255 ADLRLTSSLSEVENTDMVKATVDLQLQEVAYQAALSATA 293
>gi|162532600|gb|ABY16701.1| FlaB [Arcobacter butzleri]
Length = 307
Score = 87.1 bits (213), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + N N+ +++S+GLR++ AAD+A+ +IA +++ +++
Sbjct: 3 INTNVSSLTAQEAAVNTNKNISTSLEKLSTGLRINKAADDASGLAIADKLRTQATSINQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ + I M++ ++ TIK+K+ T +I +IT+L QL
Sbjct: 63 ISNGNSAVALLQITDKSMAEQSTILDTIKSKLIQANTDTTSVAGRTAIAKDITKLLQQLN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
+I +++NG L+ ++ AS
Sbjct: 123 NIGEQTNYNGTILLQNARTTANAST 147
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 37/102 (36%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
A T + + IDT I G IGS +++ + ++
Sbjct: 206 AGTTGVFTRTMAQSGQKAIDTAISILNGYRGDIGSTQNQVESAIRNLTTQATNIKNAEST 265
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D D A ES + L Q A+S N++ +L L +
Sbjct: 266 IRDVDYAQESANYNKLNIIAQAGSYAISQANSTQQNVLRLLQ 307
>gi|89214234|gb|ABD64429.1| flagellin [Bacillus thuringiensis serovar pirenaica]
Length = 219
Score = 87.1 bits (213), Expect = 6e-15, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 47/144 (32%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A ++ M + + A S + A+A + +++
Sbjct: 1 EHLATGKKLNNASDNPANVAVVTRMHARASGMRAAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSSNGTNSNKNRHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRLITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IDHTINMTKHIPPSPTQHDIKIST 144
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 63/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNNASDNPANVAVVTRMHARASGMRAAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++ + T T + + + L
Sbjct: 62 RMRDLAVQSSNGTNSNKNRHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRLITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 DHTINMTKHIPPSPTQHDIKISTEQEARAALLKIEEALQSVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|259417520|ref|ZP_05741439.1| flagellin domain protein [Silicibacter sp. TrichCH4B]
gi|259346426|gb|EEW58240.1| flagellin domain protein [Silicibacter sp. TrichCH4B]
Length = 282
Score = 87.1 bits (213), Expect = 6e-15, Method: Composition-based stats.
Identities = 51/195 (26%), Positives = 78/195 (40%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN A A + L + E VQD +S+G V +A D A W+I++IM SD
Sbjct: 1 MTSINTNPGAEIALRVLTNKQVEKEDVQDDISTGKEVDEAKDAPAVWAISEIMGSDLAGF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
A S + +G + V +A AG + +++ +K D I+ ++ Q Q+
Sbjct: 61 QATSSGLNVGEATVSVASAGAEQITSLLTDMKELTVQASSGVGDYSMIEEQLAQKTEQIN 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I S FNG N L T+ + + D Q T +D E+
Sbjct: 121 TIISSSGFNGVNLLATNADGNGGTGLTVAASQDRSGDAAPTQSTITVDSVDFESSTSFDI 180
Query: 181 TDGTERYGLLDRNHK 195
+ T
Sbjct: 181 NNRTAVTDAASARTA 195
Score = 45.5 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 52/99 (52%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
N A + + + I+ ++ AT +A +G+ + ++ Q+ F+ + DAV+ G+ L
Sbjct: 182 NRTAVTDAASARTALGEIEGFLRYATDSAAALGAGAQQMAEQDVFLNKLSDAVKMGISEL 241
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
D DM + R AL Q+QL+ +LSI N S + SL
Sbjct: 242 TDTDMEDAAARYEALSAQEQLSGLSLSIANASPGSLRSL 280
>gi|329850488|ref|ZP_08265333.1| flagellin fljK [Asticcacaulis biprosthecum C19]
gi|328840803|gb|EGF90374.1| flagellin fljK [Asticcacaulis biprosthecum C19]
Length = 274
Score = 87.1 bits (213), Expect = 6e-15, Method: Composition-based stats.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 3/185 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI TN AM A Q L I +L V Q+R+S+GL+VS A D+ A ++IAQ +++ +L
Sbjct: 1 MNSINTNLGAMVALQNLNKITADLRVTQNRISTGLKVSSAKDDGAIYAIAQSQRAEIKSL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQS 117
+V ++ SS VD+A D+++ +K K A + T +++++ +++
Sbjct: 61 DSVKMSLSRTSSTVDVAMTAGESIQDMLTELKEKALAASDTSLDTTSRDALKADFAAIRN 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ ++FNG N L + A D I
Sbjct: 121 QITKTIANATFNGINLLNGSRATIGALANAQGSSHLTVDAEDMSLGGGIITLGASTDFST 180
Query: 178 DSSTD 182
+S
Sbjct: 181 ATSAQ 185
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 66/104 (63%)
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
+ ++ + + +++ +D I ++A ++G+ S + FI ++D ++ V
Sbjct: 171 TLGASTDFSTATSAQALLTTLDDSISNMSSALARLGTSSKSLDRHATFIGKLQDTMDGAV 230
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
G+LVDADMA E+T+L ALQT+QQLA+QALSI N S + +LSLFR
Sbjct: 231 GKLVDADMAKEATKLQALQTKQQLAIQALSIANQSQSYMLSLFR 274
>gi|89214366|gb|ABD64495.1| truncated flagellin [Bacillus weihenstephanensis]
Length = 174
Score = 87.1 bits (213), Expect = 6e-15, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 41/113 (36%), Gaps = 3/113 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ + +G ++++A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLVTGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+++ + + E L Q+ I + FN +
Sbjct: 61 QRMRDLAVQSANGTNSNKNRDVLNKEFQSLAEQIGYIGETTEFNDLSVFDGQN 113
>gi|89214292|gb|ABD64458.1| flagellin [Bacillus weihenstephanensis]
gi|89214356|gb|ABD64490.1| flagellin [Bacillus weihenstephanensis]
Length = 219
Score = 87.1 bits (213), Expect = 6e-15, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 43/113 (38%), Gaps = 3/113 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ + +G ++++A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLVTGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+++ T+ S+ E L Q+ I + FN +
Sbjct: 61 QRMRDLAVQSANGTNSNTNRNSLNKEFQSLTEQIGYIGETTEFNDLSAFDGQS 113
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 63/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
++ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLVTGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + L
Sbjct: 62 RMRDLAVQSANGTNSNTNRNSLNKEFQSLTEQIGYIGETTEFNDLSAFDGQSRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ ++ + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNIPKSIPPSPTQHDIKISTEQEARVAIRKIEEALQNVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ V R+ D DMA E + + ++A
Sbjct: 182 NLNSQSTALTDTVSRIEDTDMAQEMSDFLKFKLLTEVA 219
>gi|16080593|ref|NP_391420.1| flagellar hook-associated protein FlgL [Bacillus subtilis subsp.
subtilis str. 168]
gi|221311491|ref|ZP_03593338.1| flagellar hook-associated protein FlgL [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315818|ref|ZP_03597623.1| flagellar hook-associated protein FlgL [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320733|ref|ZP_03602027.1| flagellar hook-associated protein FlgL [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325018|ref|ZP_03606312.1| flagellar hook-associated protein FlgL [Bacillus subtilis subsp.
subtilis str. SMY]
gi|2829830|sp|P96501|FLGL_BACSU RecName: Full=Flagellar hook-associated protein 3; Short=HAP3
gi|1762339|gb|AAC44947.1| flagellar-hook associated protein 3 (HAP3) [Bacillus subtilis
subsp. subtilis str. 168]
gi|2636066|emb|CAB15557.1| flagellar hook-filament junction [Bacillus subtilis subsp. subtilis
str. 168]
Length = 298
Score = 86.7 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 55/140 (39%), Gaps = 3/140 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++ + + L+ +Q ++SSG ++S A+D+ + + +
Sbjct: 10 QNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQA 69
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLRDIARGSS 127
+ ++ + +++ ID++S ++ + ++I E+ QL+ QL +IA
Sbjct: 70 FTWLENTETNITEGIDILSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIANTQV 129
Query: 128 FNGENWLRTDLGSSTASIAK 147
+ T+ +
Sbjct: 130 NGRYIFNGTNSDKPPVTDNG 149
Score = 46.7 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 35/125 (28%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + K V + M+ +++ ID
Sbjct: 163 VNISNNMSLKVNSDPKSAFGGTSESGQNVFEMLDSFEKALNSGSLDGMDSVLNDIDHFSD 222
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+A +G+ +R+ L + + K + D ++ T A Q+ + +
Sbjct: 223 GMSAERSDLGARYNRLELVNTRLSAQEETATKVLSDNEDVELEEVITEFIAQQSVHRATL 282
Query: 434 QALSI 438
+
Sbjct: 283 AVNAQ 287
>gi|325916940|ref|ZP_08179184.1| flagellar hook-associated protein 3 [Xanthomonas vesicatoria ATCC
35937]
gi|325536843|gb|EGD08595.1| flagellar hook-associated protein 3 [Xanthomonas vesicatoria ATCC
35937]
Length = 401
Score = 86.7 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 49/443 (11%), Positives = 115/443 (25%), Gaps = 55/443 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ + + L ++ ++SSG R+ A D+ A + A++
Sbjct: 5 ISTSMMYSQSIASMGAKQTRLNQLESQLSSGQRLVTAKDDPVAAGTAVGLDRALAAITRF 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ +++ + + +++A D M+ + D K+I SE++ L+ +
Sbjct: 65 GENANNVQNRLGLQENVLARAGDAMARVNELTIQANSSALAPDDRKAIASELSSLRDSMV 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G S I + ++ D K D ++ +
Sbjct: 125 SLANSTDGTGRYLFGGTADGSAPFIKSNGGVTYNGDQTQKQVEVAPDTFVSDTLPGSEIF 184
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G +D + L + T + + +
Sbjct: 185 MRIRTGDGTVDAHANTANTGTGLLLDFSRDASTGSWNGSSYSVQFTAANTYEVRDSTNAV 244
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ G + AA
Sbjct: 245 VSTGTYKDGADITAAG-------------------------------------------- 260
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
++ + +S + + + LN
Sbjct: 261 --------LRMRISGAPAVGDSFQIGASTTKDVFSTIDDLVGALNSDALTQPQKATMINT 312
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ + I A G+ S I ++ ++ + + D D AS
Sbjct: 313 LQTSMRDIAQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTTLSSIRDLDYASAIG 372
Query: 421 RLSALQTQQQLAVQALSIVNNST 443
+ + Q A + +S+
Sbjct: 373 QYQLEKASLQAAQTIFQQMQSSS 395
>gi|89214282|gb|ABD64453.1| flagellin [Bacillus thuringiensis serovar rongseni]
Length = 219
Score = 86.7 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + + S + +A + A +++
Sbjct: 1 EHLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTVEAALQTATNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAIQSANGTNSNKNRHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IGHTINMPKHIPPSPTQHDIKIST 144
Score = 71.7 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTVEAALQTATNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAIQSANGTNSNKNRHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTINMPKHIPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLDSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|126652478|ref|ZP_01724650.1| flagellar hook-associated protein L [Bacillus sp. B14905]
gi|126590749|gb|EAZ84864.1| flagellar hook-associated protein L [Bacillus sp. B14905]
Length = 315
Score = 86.7 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 28/218 (12%), Positives = 71/218 (32%), Gaps = 3/218 (1%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
+ + + L + + +QD+++SG +++ +D+ + D + + +
Sbjct: 24 SSNMLRNLNNSYGKMSKLQDQINSGSKITRPSDDPVIAVKGMGYRRDLAKVEQYTRNMIT 83
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGS 126
S +D +++ + M ++ + D I+ EI Q++ QL+D+ +
Sbjct: 84 AGSWLDSTDESLNQVGEQMKRVRELVIQAATDSNTSEDRDKIKKEIDQIRQQLQDVGNTN 143
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
+ T + ++ P L ++ D +
Sbjct: 144 IGGSYIFSGTRTNEPLFIGGAINPNTNQESVKVEIYDGIQLSVNTPGKDLFNNIDDMMGK 203
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
L + E VS + I+ K+
Sbjct: 204 ISDLLGDPTKTGEEIASMLGGVSSSTTNDDITAMHNKV 241
Score = 46.7 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 22/228 (9%), Positives = 52/228 (22%)
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
V Y + + S + + A
Sbjct: 74 VEQYTRNMITAGSWLDSTDESLNQVGEQMKRVRELVIQAATDSNTSEDRDKIKKEIDQIR 133
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
+ V + S +P +V + + D
Sbjct: 134 QQLQDVGNTNIGGSYIFSGTRTNEPLFIGGAINPNTNQESVKVEIYDGIQLSVNTPGKDL 193
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
++ + ++ + ++ I A IG+ +
Sbjct: 194 FNNIDDMMGKISDLLGDPTKTGEEIASMLGGVSSSTTNDDITAMHNKVLEAQADIGARQN 253
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
R+ + E+ + + V K + D A T + ++ Q A+
Sbjct: 254 RVEMMENRLGVREVNVTKQLRDNESVDYAKAITEMVTHESIHQAALSV 301
>gi|83858826|ref|ZP_00952348.1| flagellin FljL [Oceanicaulis alexandrii HTCC2633]
gi|83853649|gb|EAP91501.1| flagellin FljL [Oceanicaulis alexandrii HTCC2633]
Length = 275
Score = 86.7 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 42/186 (22%), Positives = 72/186 (38%), Gaps = 3/186 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN AM A Q L N +L+ Q+R+++GL VS A DN ++IAQ M+S
Sbjct: 4 SVNTNSGAMIALQNLNKTNMDLQTTQNRINTGLEVSSAKDNGGIYAIAQRMRSQVSGYGV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
V + G + +D+A A D++ + K A + ++ + L+ Q+
Sbjct: 64 VGQILDRGEATLDVALAAGEAISDLLIEMNEKALAASDASLDTASRSALNEDFKALRQQI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I + FNG N + S A + + +I + +
Sbjct: 124 STIVSNAEFNGVNLIDGSTNSFVALANQDGSNTITVSAENMSLSGSIVSLSATASFATAT 183
Query: 180 STDGTE 185
Sbjct: 184 QASNIA 189
Score = 80.6 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 64/136 (47%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
++ + + + ++ +I + T ++ + S I T +
Sbjct: 139 DGSTNSFVALANQDGSNTITVSAENMSLSGSIVSLSATASFATATQASNIASQIGTTLDS 198
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+A ++G+ S + + F+ + DA+E G+G LVDAD+A ES L ALQ +QQL Q
Sbjct: 199 VNSALARLGTKSKSLEIHSTFVTKLSDALEVGIGNLVDADLAKESAELQALQVKQQLGTQ 258
Query: 435 ALSIVNNSTARILSLF 450
ALSI N ILS F
Sbjct: 259 ALSIANQQPQSILSYF 274
>gi|89214230|gb|ABD64427.1| flagellin [Bacillus thuringiensis serovar tolworthi]
Length = 219
Score = 86.7 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 41/113 (36%), Gaps = 3/113 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ + +G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLVTGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+++ + S+ E L Q+ I + FN +
Sbjct: 61 QRMRDLAVQSSNVTNSNKNRDSLSKEFQSLTEQIGYIGETTEFNDLSVFDGQN 113
Score = 70.2 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 64/218 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
++ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLVTGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++ + T T + + + L
Sbjct: 62 RMRDLAVQSSNVTNSNKNRDSLSKEFQSLTEQIGYIGETTEFNDLSVFDGQNRLITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +GS+ +R+ +
Sbjct: 122 GHTINMPKHIPPSPTQHDIKISTEQEARAAILKIEEALQSVSIHRADLGSMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|89214252|gb|ABD64438.1| flagellin [Bacillus thuringiensis serovar toumanoffi]
Length = 219
Score = 86.7 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ + +G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLVTGKKLNTASDNPANVAIVTRMYARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ +E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRHSLNTEFQSLAEQIGYIGETTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVHISKSIPPSPTQHDIKIST 144
Score = 64.0 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 65/218 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
++ KK A+ + A + + +A G+ A + T + + +
Sbjct: 2 HLVTGKKLNTASDNPANVAIVTRMYARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRHSLNTEFQSLAEQIGYIGETTEFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + ++ + + + + + I+ ++ +GS+ +R+ +
Sbjct: 122 GHTVHISKSIPPSPTQHDIKISTEQEARAAILKIEEALQNVLLHRADLGSMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ ++ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDTASQVEDADMAQEISDFLKFKLLTEVA 219
>gi|319781673|ref|YP_004141149.1| flagellin domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167561|gb|ADV11099.1| flagellin domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 354
Score = 86.7 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 67/173 (38%), Positives = 96/173 (55%), Gaps = 1/173 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI+TN SA++A Q L N +LE Q R+S+G RVS A+DNAAYWSIA M+SDN AL
Sbjct: 1 MASIMTNASALTALQSLSATNKSLEQTQARISTGYRVSQASDNAAYWSIATTMRSDNSAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV-ERGTDSKSIQSEITQLQSQL 119
S V DA+GLG+SKVD A G++ + + IK K+ + V + Q+EI LQ+Q+
Sbjct: 61 STVQDALGLGASKVDAAYTGITNVLTTIGQIKTKVLSMVGQTDAAKAKTQTEIKALQTQM 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
+ A ++F+G N+L T++ S I + +
Sbjct: 121 KSFADAATFSGSNFLAVTSKQVTSANDGVQPDSQIVSSFNRSSSGAVSIGTIN 173
Score = 60.5 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 47/95 (49%), Positives = 65/95 (68%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ +MV+ +D + T +A IGS S I LQ+ F + + D++++GVG+LVDADM
Sbjct: 259 TDGIITQMVTMMDKVMAQLTDSATIIGSAKSSIDLQKTFTQSLMDSIDRGVGQLVDADMN 318
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ESTRL ALQ QQQL +QALSI N+S+ ILSLF+
Sbjct: 319 KESTRLQALQVQQQLGIQALSIANSSSQSILSLFK 353
>gi|89214336|gb|ABD64480.1| flagellin [Bacillus thuringiensis serovar brasilensis]
Length = 219
Score = 86.7 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 43/111 (38%), Gaps = 3/111 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ + S+ E L Q+ I + FN +
Sbjct: 61 QRMRDLAVQSANDTNSNKNRDSLNREFQSLTEQIGYIDETTEFNDLSVFDG 111
Score = 69.8 bits (168), Expect = 9e-10, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+D + T T + + L
Sbjct: 62 RMRDLAVQSANDTNSNKNRDSLNREFQSLTEQIGYIDETTEFNDLSVFDGQKRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +GS+ +R+ +
Sbjct: 122 GHTVNITKHIPPSPTQHDINISTEQEARAAIRKIEEALQNVSLHRADLGSMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NVNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|89214290|gb|ABD64457.1| flagellin [Bacillus thuringiensis serovar israelensis]
Length = 219
Score = 86.7 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISTLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAGVERGTDSKS---IQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ +K+ + E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSSNGTNSNKNCHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IDHTINMTKHIPPSPTQHDIKIST 144
Score = 66.3 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 69/218 (31%), Gaps = 1/218 (0%)
Query: 216 TISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAA 275
++T K + A + + + T+ + ++
Sbjct: 2 HLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISTLRTAEAALQTVTNILQ 61
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
+ + +S+ +S+ + + +G T + D +R +I
Sbjct: 62 RMRDLAVQSSNGTNSNKNCHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDDI 121
Query: 336 DSGYSMVTLNITRHANTD-AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
D +M D + + + I+ ++ + +G++ +R+ +
Sbjct: 122 DHTINMTKHIPPSPTQHDIKISTEQEARAALLKIEEALQSVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DA+MA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDAEMAQEMSDFLKFKLLTEVA 219
>gi|321313087|ref|YP_004205374.1| flagellar hook-associated protein FlgL [Bacillus subtilis BSn5]
gi|320019361|gb|ADV94347.1| flagellar hook-associated protein FlgL [Bacillus subtilis BSn5]
Length = 298
Score = 86.7 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 53/140 (37%), Gaps = 3/140 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++ + + L+ +Q ++SSG ++S A+D+ + + +
Sbjct: 10 QNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQA 69
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIARGSS 127
+ ++ + +++ ID++S ++ Q+ E+ QL+ QL +IA
Sbjct: 70 FTWLENTETNITEGIDILSKVRELAVEAQNDTNGESERQAIGVEVKQLKEQLLNIANTQV 129
Query: 128 FNGENWLRTDLGSSTASIAK 147
+ T+ +
Sbjct: 130 NGRYIFNGTNSDKPPVTDNG 149
Score = 47.0 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 34/125 (27%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + K V + M+ ++ ID
Sbjct: 163 VNISNNMSLKVNSDPKSAFGGTSESGQNVFEMLDSFEKALNSGSLDGMDSVLDDIDHFSD 222
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+A +G+ +R+ L + + K + D ++ T A Q+ + +
Sbjct: 223 GMSAERSDLGARYNRLELVNTRLSAQEETATKVLSDNEDVELEEVITEFIAQQSVHRATL 282
Query: 434 QALSI 438
+
Sbjct: 283 AVNAQ 287
>gi|218528293|ref|YP_002419109.1| flagellin domain protein [Methylobacterium chloromethanicum CM4]
gi|218520596|gb|ACK81181.1| flagellin domain protein [Methylobacterium chloromethanicum CM4]
Length = 582
Score = 86.7 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 55/205 (26%), Positives = 100/205 (48%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTS+ TN +AM+A L+ I L +R+++ R++ A++ AAYWSIA +++DN +L
Sbjct: 1 MTSLSTNTAAMTALGTLKGITAQLATTGNRLATDQRIAAASNGAAYWSIATAVRTDNASL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV D +GLG++ D+A AG+ + + +++ + + G D +Q+E+ +Q+++R
Sbjct: 61 RAVGDTLGLGAAAFDVAYAGLDSVLSNLRSLRATLQTALAPGIDRAKVQTEVAAIQNRMR 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A S G NWL D S+T + ++ R +G T ++ + S
Sbjct: 121 ATADTSVSAGRNWLSVDSASATYRPREDIVAGLSRGSSGAATFLTFPVEVEALKLYDASP 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
T + I +
Sbjct: 181 TVIRTAPMPASLSGDIPLAITSAFG 205
Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 57/97 (58%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ++ ++ ++T I AT ++G+ + Q F+ + E+ +G LVDAD
Sbjct: 485 ASGEATLQAVIRDVETVIARATDTGARLGAGKLLVEGQRMFLDALVKTNERTIGTLVDAD 544
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +E++RL ALQ Q+ LA QAL+I N + IL+LFR
Sbjct: 545 VEAEASRLRALQAQRDLAAQALNIANAAPQAILALFR 581
>gi|291486093|dbj|BAI87168.1| flagellar hook-associated protein FlgL [Bacillus subtilis subsp.
natto BEST195]
Length = 298
Score = 86.7 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 53/140 (37%), Gaps = 3/140 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++ + + L+ +Q ++SSG ++S A+D+ + + +
Sbjct: 10 QNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQA 69
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIARGSS 127
+ ++ + +++ ID++S ++ Q+ E+ QL+ QL +IA
Sbjct: 70 FTWLENTETNITEGIDILSKVRELAVEAQNDTNGEAERQAIGVEVKQLKEQLLNIANTQV 129
Query: 128 FNGENWLRTDLGSSTASIAK 147
+ T+ +
Sbjct: 130 NGRYIFNGTNSDKPPVTDNG 149
Score = 47.0 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 34/125 (27%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + K V + M+ ++ ID
Sbjct: 163 VNISNNMSLKVNSDPKSAFGGTSESGQNVFEMLDSFEKALNSGSLDGMDNVLDDIDHFSD 222
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+A +G+ +R+ L + + K + D ++ T A Q+ + +
Sbjct: 223 GMSAERSDLGARYNRLELVNTRLSAQEETATKVLSDNEDVELEEVITEFIAQQSVHRATL 282
Query: 434 QALSI 438
+
Sbjct: 283 AVNAQ 287
>gi|218678702|ref|ZP_03526599.1| flagellin C protein [Rhizobium etli CIAT 894]
Length = 189
Score = 86.7 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 48/138 (34%), Positives = 78/138 (56%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ S + + + ++ + + + ++ I+ +
Sbjct: 51 DTSSSGNVLFGMTSTGTIDTTSGIIGTSYGTIGSIYSMDISTFGSVEISMALTSIEAGLN 110
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
T AA ++GSIS+RI LQE+F+ + D+++ GVGRLVDA+M ES++L+ALQTQQQLA+
Sbjct: 111 AMTKAASQLGSISTRIDLQENFVGALSDSIDSGVGRLVDANMEEESSKLTALQTQQQLAI 170
Query: 434 QALSIVNNSTARILSLFR 451
Q+LSI N+S IL+LFR
Sbjct: 171 QSLSIANSSAQNILTLFR 188
>gi|89214284|gb|ABD64454.1| flagellin [Bacillus thuringiensis serovar pondicheriensis]
Length = 219
Score = 86.7 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDALSMLRTAEATLQTVANIL 60
Query: 89 STIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSSNDTNSNKNRDSLNKEFQSLTEQISYIGETTEFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNVTKHISPSPTQHDIKIST 144
Score = 69.8 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 65/218 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T T + + +
Sbjct: 2 HLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDALSMLRTAEATLQTVANILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++D + T T + + + L
Sbjct: 62 RMRDLAVQSSNDTNSNKNRDSLNKEFQSLTEQISYIGETTEFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ ++ + + + + + I+ ++ +G++ +R+ +
Sbjct: 122 GHTVNVTKHISPSPTQHDIKISTEQEARAAIRKIEEALQNVLLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLSEVA 219
>gi|332994126|gb|AEF04181.1| flagellin-like protein [Alteromonas sp. SN2]
Length = 266
Score = 86.7 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 79/214 (36%), Gaps = 3/214 (1%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDI 76
L+ + + ++++SG ++ A+D AA I + S+ + + G S +
Sbjct: 13 LQQVQEKQNTLLEKLASGKEINSASDGAAAQQIIDRLTSEVEGNRQAVNNVYDGISLAQV 72
Query: 77 AKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
A+ G+S D ++ I+ D +++QSEI+QLQ + ++F G+
Sbjct: 73 AEGGLSNINDDVNRIRELTIQSGNGVLSDGDRQALQSEISQLQENISFTIEQTNFAGKPL 132
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
L + S A ++ + Q++ + +D + T+ +
Sbjct: 133 LSDNGALSFQVGANGGNSVDVKTQDIGSQLSDVLSIDLTSGSSVDDALSATDEAIEILGG 192
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+ + + ++T + +
Sbjct: 193 ARGDLGATQNSLASTARNLTQSNVNTAEARSRIQ 226
Score = 64.0 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 39/95 (41%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
++++ +S D I+ A G +G+ + + + + R+ D D
Sbjct: 171 TSGSSVDDALSATDEAIEILGGARGDLGATQNSLASTARNLTQSNVNTAEARSRIQDLDY 230
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A S++ +A Q Q A+ + N ++L+L
Sbjct: 231 AQASSQQAANDVQGQAALTVQAQANQQQGQVLALL 265
>gi|114046845|ref|YP_737395.1| flagellar hook-associated protein FlgL [Shewanella sp. MR-7]
gi|113888287|gb|ABI42338.1| flagellar hook-associated protein 3 [Shewanella sp. MR-7]
Length = 402
Score = 86.7 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 50/417 (11%), Positives = 110/417 (26%), Gaps = 45/417 (10%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
+ D++SSG +V+ + D+ + N + I ++ + ++
Sbjct: 20 QTATSKILDQLSSGKKVNTSGDDPVAALGIDNLNQRNALVDQFMKNIDYATNHLQQTESQ 79
Query: 81 MSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGS 140
+ +A ++S++K+ + G S+ Q+ L+ L + ++ E+ G+
Sbjct: 80 LGQADALISSMKDLMLQGSNGSQTSEERQTIADDLRKSLDQLLTIANTKDESGNYLFAGN 139
Query: 141 STASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
T I Y D ++ + IK
Sbjct: 140 KT-----------ETLPFQFDANGKIVYQGDSGVHSAIIASGIQLNTNVAGDTAFIKSPN 188
Query: 201 QVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPN 260
+ G S KL + + D G + V A PA
Sbjct: 189 AMGDYSVNYSSSQQGEFSVTSAKLDGVTPSLSDYQINFLDDGAGGINVEVTDTATPANVI 248
Query: 261 TTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDT 320
+ + + G I
Sbjct: 249 SAAAPFDPSASINFDGVKLSIEGEPKI--------------------------------- 275
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
+ ++ I +S + + + ++++ I + +K + G
Sbjct: 276 -GDSFTLHQEAEVSIFDTFSKAIALFDNADQVQTPSGQSELAQLLNNIQSGVKQISQQQG 334
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
G+ + D + + +L D D A+ T Q S
Sbjct: 335 LAGNSLKVLEKYTDKHTDEKLINTSALSKLEDVDYATAITEFEKQQLALNAVSSVFS 391
>gi|126738588|ref|ZP_01754293.1| flagellin protein [Roseobacter sp. SK209-2-6]
gi|126720387|gb|EBA17093.1| flagellin protein [Roseobacter sp. SK209-2-6]
Length = 264
Score = 86.7 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 48/133 (36%), Positives = 77/133 (57%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M A Q L+ IN NL Q+++S+G V++A DN+A W+I+++M+SD +AVSD++ LG
Sbjct: 1 MVALQTLQSINNNLTETQNQISTGKEVANAKDNSAIWAISKVMESDVSGFNAVSDSLSLG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
S V +A AG + D++ +K K+ A D + +++ L+ Q+ + S FNG
Sbjct: 61 ESTVAVATAGAEQITDLLKEMKEKVVAATGENVDHDKLNADVQSLKDQITSVIGASQFNG 120
Query: 131 ENWLRTDLGSSTA 143
N L T G T
Sbjct: 121 ANLLNTAGGDITV 133
Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 83/203 (40%)
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
A A T K VAA+ + + V++ + +
Sbjct: 62 STVAVATAGAEQITDLLKEMKEKVVAATGENVDHDKLNADVQSLKDQITSVIGASQFNGA 121
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ + S+ + S V T + A E +S I
Sbjct: 122 NLLNTAGGDITVLSSIDRDSTGAVTSSNITVSSVDFEATLTLANVDVSSATAAEGSISEI 181
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
+ I+ A A +G+ +SRI Q +F+ + DA++ G+G LVD +M S RL ALQTQ
Sbjct: 182 EQLIQVAVDGAAALGASASRIEKQSEFVSKVTDAMKSGIGSLVDTNMEEASARLKALQTQ 241
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQL VQAL+I N++ + + LFR
Sbjct: 242 QQLGVQALTIANSAPSTLQQLFR 264
>gi|89214204|gb|ABD64414.1| flagellin [Bacillus thuringiensis serovar thompsoni]
Length = 219
Score = 86.7 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANVAIMTRMHTRASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IDHTINMTKHIPPSPTQHDIKIST 144
Score = 69.8 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANVAIMTRMHTRASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 DHTINMTKHIPPSPTQHDIKISTEQEARAALLKIEEALQSVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|127512286|ref|YP_001093483.1| flagellar hook-associated protein FlgL [Shewanella loihica PV-4]
gi|126637581|gb|ABO23224.1| flagellar hook-associated protein 3 [Shewanella loihica PV-4]
Length = 396
Score = 86.7 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 48/434 (11%), Positives = 103/434 (23%), Gaps = 51/434 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + D+++SG RV+ A D+ + N +
Sbjct: 3 ISTAQMFNQNINSVLNKQSATSKIIDQIASGKRVNTAGDDPVAAIGIDNLNQQNALVDQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I ++++ + ++ + A + +++ +I V Q +L+ L ++
Sbjct: 63 MKNIDYATNRLALTESKLGTAETLTGSVREQILRAVNGSLSDSERQMIADELKGTLEELV 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ E+ G T + + + +G +
Sbjct: 123 SVANTKDESGNYMFAGYETGNQPFAFNAAGNVVYSGDSGVRQAIVASGVTLGTNVPGDQA 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ D V S + + T + A
Sbjct: 183 FMNAPSGLGDFSANYLSTQTGDFRVLSAAISDPATYVDDT-----------YSFTMNGAN 231
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ V I ++ T +
Sbjct: 232 LEIRDSSATLVTTVPNFDAANPINFNGIEVKLDGQPAPGDTFSITPQSQVSVFDTINQAI 291
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
T NT + +
Sbjct: 292 TLLEDPNKVNTPQGKAELA----------------------------------------Q 311
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
M++ ID+ + + A G+ G+ +I + + L D D AS T L
Sbjct: 312 MLNNIDSGVNQLSTARGEAGNSLKQIERYSSTHVEEKLVNSSALSMLEDLDYASAITELE 371
Query: 424 ALQTQQQLAVQALS 437
Q S
Sbjct: 372 KQQLALNAVSSVFS 385
>gi|157738454|ref|YP_001491138.1| flagellin [Arcobacter butzleri RM4018]
gi|157700308|gb|ABV68468.1| flagellin [Arcobacter butzleri RM4018]
Length = 307
Score = 86.7 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + N N+ +++S+GLR++ AAD+A+ +IA +++ +++
Sbjct: 3 INTNVSSLTAQEAAVNTNKNISTSLEKLSTGLRINKAADDASGLAIADKLRTQATSINQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ + I M++ ++ TIK+K+ T +I +IT+L QL
Sbjct: 63 ISNGNSAVALLQITDKSMAEQSTILDTIKSKLIQANTDTTSVAGRTAIAKDITKLLQQLN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
+I +++NG N L+ ++ AS
Sbjct: 123 NIGEQTNYNGTNLLQNARTTANAST 147
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 37/102 (36%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
A T + + IDT I G IGS +++ + ++
Sbjct: 206 AGTTGVFTRTMAQSGQKAIDTAISILNGYRGDIGSTQNQVESAIRNLTTQATNIKNAEST 265
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D D A ES + L Q A+S N++ +L L +
Sbjct: 266 IRDVDYAQESANYNKLNIIAQAGSYAISQANSTQQNVLRLLQ 307
>gi|315636754|ref|ZP_07891983.1| bacterial flagellin subfamily [Arcobacter butzleri JV22]
gi|315478971|gb|EFU69675.1| bacterial flagellin subfamily [Arcobacter butzleri JV22]
Length = 307
Score = 86.7 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + N N+ +++S+GLR++ AAD+A+ +IA +++ +++
Sbjct: 3 INTNVSSLTAQEAAVNTNKNISTSLEKLSTGLRINKAADDASGLAIADKLRTQATSINQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ + I M++ ++ TIK+K+ T +I +IT+L QL
Sbjct: 63 ISNGNSAVALLQITDKSMAEQSTILDTIKSKLIQANTDTTSVAGRTAIAKDITKLLQQLN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
+I +++NG N L+ ++ AS
Sbjct: 123 NIGEQTNYNGTNLLQNARTTANAST 147
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 37/102 (36%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
A T + + IDT I G IGS +++ + ++
Sbjct: 206 AGTTGIFTRTMAQSGQKAIDTAISILNGYRGDIGSTQNQVESAIRNLTTQATNIKNAEST 265
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D D A ES + L Q A+S N++ +L L +
Sbjct: 266 IRDVDYAQESANYNKLNIIAQAGSYAISQANSTQQNVLRLLQ 307
>gi|157062958|gb|ABV04072.1| flagellin A [Arcobacter butzleri]
Length = 307
Score = 86.7 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + N N+ +++S+GLR++ AAD+A+ +IA +++ +++
Sbjct: 3 INTNVSSLTAQEAAVNTNKNISSSLEKLSTGLRINKAADDASGLAIADKLRTQATSINQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ + I M++ ++ TIK+K+ T +I +IT+L QL
Sbjct: 63 ISNGNSAVALLQITDKSMAEQSTILDTIKSKLIQANTDTTSVAGRTAIAKDITKLLQQLN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
+I +++NG N L+ ++ AS
Sbjct: 123 NIGEQTNYNGTNLLQNARTTANAST 147
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 36/102 (35%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
A T + + ID I G IGS +++ + ++
Sbjct: 206 AGTTGVFTRTMAQSGQKAIDKAISILNGYRGDIGSTQNQVESAIRNLTTQATNIKNAEST 265
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D D A ES + L Q A+S N++ +L L +
Sbjct: 266 IRDVDYAQESANYNKLNIIAQAGSYAISQANSTQQNVLRLLQ 307
>gi|28194499|gb|AAO33576.1|AF478359_1 truncated flagellin protein [Bartonella bacilliformis]
Length = 375
Score = 86.7 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 1/179 (0%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+SILTN SAM+A Q LR+I+ NL+ +DR+S+GLR+ A+DN AYWSI+ +MK D+ +S
Sbjct: 3 SSILTNRSAMTALQTLRNIDNNLDKSKDRISTGLRIGSASDNTAYWSISSMMKHDSNTMS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE-RGTDSKSIQSEITQLQSQLR 120
AV DAI LG +V++A ++ + + I+ + + E D IQ I +
Sbjct: 63 AVVDAINLGREQVNVAATAVNLTKESLDDIQKSMVSAREKSDDDIMKIQDSIKGNMQNIS 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ + ++F G+N L + GS + D +V +++ + +D
Sbjct: 123 NAIQSAAFGGKNILSNGGEKVGIAAGYRREGSAVYVDMIEVGGAELNFGVMGPDGTIDM 181
Score = 66.7 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
+ I + + + + + + + A KIGS +++ Q +F+K +
Sbjct: 269 NDFVQIQGVGGLPSVAQSIILNSVQKTVRHAVDVTLTAGSKIGSAVNQVDSQLNFVKRLL 328
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
D +E G+G LVDADM +ES +LSALQ QQQL +
Sbjct: 329 DNIEAGIGALVDADMNAESAKLSALQVQQQLGI 361
>gi|304438223|ref|ZP_07398165.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368830|gb|EFM22513.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 444
Score = 86.7 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/437 (10%), Positives = 122/437 (27%), Gaps = 9/437 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I +N+ + L +++Y + ++ G ++ +DN+ +S G
Sbjct: 1 MIRISSNYMVQRYQKDLNELDYTKAKLMEQ-GDGKKLHRPSDNSVDYSRYLRYNVSEGEN 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQ--SEITQLQSQ 118
++ G S ++ + +S D+ T K K G D + +++++
Sbjct: 60 DRYQASVKAGISWMNTTQTALSSMEDIQKTFKAKTIQGANDDKDENGGDWPAIAREMKAE 119
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
++ I + + + + + +
Sbjct: 120 IQQIVSLGNTQLGDRYIFSGQADLRQPFSISDENKPLLRGVAKTLDDRQAAFFNDASNDK 179
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
S+ + L + + + + + G + T A +
Sbjct: 180 SANFLHQMISLDGSDGENYYMNTLTGAVYSRQFVQEGYKALLAKGYKTVGEAAAAGEATS 239
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ G ++ S ++ + + R +
Sbjct: 240 IGNGGAGPNFIKNNFKNTGEVLNPGWSVGVGGVTMKFSTVRQQIVSYNGDFRYISMVKQN 299
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
T TV K G + D + + + V ++
Sbjct: 300 GSVEPTADTVNKTGLDIFGRDLFDDENSGNEPSGTAMVNSMLTVYAKTKSADPHWLSSDG 359
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+S D + A + G+ + D + ++ + + + + AD+A
Sbjct: 360 ------ISLADAANQVTLQAHTETGARTQLYKNMTDVLTDYKENITRDITNVSSADVAEL 413
Query: 419 STRLSALQTQQQLAVQA 435
+ ++ QT +++
Sbjct: 414 AMKMMQQQTVMSMSLSM 430
>gi|254294671|ref|YP_003060694.1| flagellin domain protein [Hirschia baltica ATCC 49814]
gi|254043202|gb|ACT59997.1| flagellin domain protein [Hirschia baltica ATCC 49814]
Length = 277
Score = 86.7 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
T T ++ + + + I A ++G+ S +I +F+ ++D + +G
Sbjct: 172 TLDPATHDLSDPANAQLALDAVKASITNVNGALSRLGASSQKIDNHANFVSRLQDVITEG 231
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
VG LVDAD+ ES L +LQ +QQL VQALSI N S +LSLF+
Sbjct: 232 VGGLVDADLGKESALLQSLQVKQQLGVQALSIANESPQAVLSLFQ 276
Score = 83.3 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N ++ A Q L N +LE DR+SSGL+++ A DNAA +S+AQ ++ +N A +
Sbjct: 5 VNNNAQSLIALQNLNATNKHLEGTTDRISSGLKIASAKDNAAVFSVAQSLRGENSAYDII 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE--RGTDSKSIQSEITQLQSQLRD 121
+ S D+A A D++ ++ K + + + Q + T L +Q
Sbjct: 65 QIGLDRSKSVGDVAITAGETASDILIQLREKALSATKEIDAESRAAFQEDFTSLMTQFEK 124
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I + F+G N L + +A + S +R D ++ LDP T L
Sbjct: 125 IVGAAEFDGVNLLNNSQPAGLEFVADASGASTLRIDAEDFSFGGVNVTLDPATHDLSDPA 184
Query: 182 DGTERYGLLDRNHKIKVEP 200
+ + +
Sbjct: 185 NAQLALDAVKASITNVNGA 203
>gi|27381977|ref|NP_773506.1| flagellin [Bradyrhizobium japonicum USDA 110]
gi|27355147|dbj|BAC52131.1| flagellin [Bradyrhizobium japonicum USDA 110]
Length = 313
Score = 86.7 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 63/174 (36%), Positives = 97/174 (55%), Gaps = 4/174 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+S+LTN +AM+A Q LR ++ L Q R+S+G RVS A+DNAAYWSIA M+SDN AL
Sbjct: 1 MSSLLTNSTAMTALQTLRSVSSQLSTTQTRISTGQRVSTASDNAAYWSIATSMRSDNAAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAI----DVMSTIKNKITAGVERGTDSKSIQSEITQLQ 116
SAVSD++GL ++ VD ++ I ++ ++ + G D IQ+++TQ+Q
Sbjct: 61 SAVSDSLGLSAATVDTEYTALNTVIGDKDSGLTKLQALLVEAKTAGIDRSKIQADVTQIQ 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL 170
+QL+ A ++ NG NWL D S+++ + T +
Sbjct: 121 NQLKSTADSATINGINWLSIDTTPSSSTATPTSFNLVSSYSRVGNTPTIGSITV 174
Score = 69.8 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/97 (47%), Positives = 67/97 (69%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ ++ ++ + I +AA +G++ +RI +F+K + D+V++GVG+LVDAD
Sbjct: 217 ATDQTKLDGYIAQVTAAIGSVASAAANLGAVKNRISTNTEFVKNLMDSVDRGVGQLVDAD 276
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
M ESTRL+ALQ QQQL VQALSI NNS+ ILSLFR
Sbjct: 277 MNQESTRLAALQVQQQLGVQALSIANNSSQSILSLFR 313
>gi|23011442|ref|ZP_00051799.1| COG1344: Flagellin and related hook-associated proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 172
Score = 86.3 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 63/150 (42%), Positives = 95/150 (63%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTS+LTN SAM+A L+ IN NL+ +RVS+G RVS A+DNAAYWSIA +++DN +L
Sbjct: 1 MTSLLTNISAMTALTTLKSINTNLDATSNRVSTGQRVSTASDNAAYWSIATTVRTDNASL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SAV D++GLGSS VD A G++ + + ++ K+ ++ G D +Q+EI +Q +++
Sbjct: 61 SAVKDSLGLGSSAVDTAYNGLNSVLADLQNMRAKLQTALQPGVDRAKVQTEIKAIQDKMK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVI 150
A S+ +G+NWL D S +
Sbjct: 121 ATADSSTSSGQNWLSVDSSPSNNGYQATQN 150
>gi|162532605|gb|ABY16705.1| FlaB [Arcobacter butzleri]
Length = 307
Score = 86.3 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + N N+ +++S+GLR++ AAD+A+ +IA +++ +++
Sbjct: 3 INTNVSSLTAQEAAVNTNKNISSSLEKLSTGLRINKAADDASGLAIADKLRTQATSINQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ + I M++ ++ TIK+K+ T +I +IT+L QL
Sbjct: 63 ISNGNSAVALLQITDKSMAEQSTILDTIKSKLIQANTDTTSVAGRTAIAKDITKLLQQLN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
+I +++NG N L+ ++ AS
Sbjct: 123 NIGEQTNYNGTNLLQNARTTANAST 147
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 35/102 (34%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
A T + + IDT I G IGS +++ + ++
Sbjct: 206 AGTTGVFTRTMAQSGQKAIDTAISILNGYRGDIGSTQNQVESAIRNLTTQATNIKNAEST 265
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ D D A ES + L Q A+S N +L L +
Sbjct: 266 IRDVDYAQESANYNKLNIIAQAGSYAISQANAVQQNVLRLLQ 307
>gi|89214258|gb|ABD64441.1| flagellin [Bacillus thuringiensis serovar yosoo]
Length = 219
Score = 86.3 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANAAIVTRMHASASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAGVERGTDSKS---IQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ +K+ + E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSSNGTNSNKNCHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IDHTINMTKHIPPSPTQHDIKIST 144
Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 70/218 (32%), Gaps = 1/218 (0%)
Query: 216 TISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAA 275
++T K + A + + + + T+ + ++
Sbjct: 2 HLATGKKLNHASDNPANAAIVTRMHASASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
+ + +S+ +S+ + + +G T + D +R +I
Sbjct: 62 RMRDLAVQSSNGTNSNKNCHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDDI 121
Query: 336 DSGYSMVTLNITRHANTD-AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
D +M D + + + I+ ++ + +G++ +R+ +
Sbjct: 122 DHTINMTKHIPPSPTQHDIKISTEQEARAALLKIEEALQSVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DA+MA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDAEMAQEMSDFLKFKLLTEVA 219
>gi|329928724|ref|ZP_08282573.1| flagellar hook-associated protein 3 [Paenibacillus sp. HGF5]
gi|328937505|gb|EGG33923.1| flagellar hook-associated protein 3 [Paenibacillus sp. HGF5]
Length = 297
Score = 86.3 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 45/138 (32%), Gaps = 4/138 (2%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDI 76
L+ L+ Q+++ + R++ +D+ + A + A + S +
Sbjct: 16 LQGNYRRLDKYQEQMMTQRRINRPSDDPVGVASALQYRGQITATTQFEQNAEDADSWLKY 75
Query: 77 AKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLRDIARGSSFNGENW 133
M++ ++ + G ++I +E+ QL QL + S F G+
Sbjct: 76 GDTVMTEVTQIIQKLSELAVQGGTDTVPADARENIAAEVDQLFQQLVSL-GNSQFKGKYI 134
Query: 134 LRTDLGSSTASIAKSVIG 151
+
Sbjct: 135 FNGERTDERPFPDDPTQT 152
Score = 49.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 7/83 (8%), Positives = 33/83 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ ++ + + ++ + ++G +R+ + + + ++ DAD
Sbjct: 203 ADDTAGIQSAIPSLQKNLETTITSQAEMGGKQNRLEFTLNRLGDLNINYMDLQSKVEDAD 262
Query: 415 MASESTRLSALQTQQQLAVQALS 437
++ L ++ Q ++ ++
Sbjct: 263 ISKVIIDLKTSESVYQASLDTMA 285
>gi|87242508|gb|ABD33793.1| flagellin [Bacillus weihenstephanensis]
Length = 242
Score = 86.3 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 58/161 (36%), Gaps = 3/161 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ +R+SSG ++ AAD+AA +IA M++ G L+ + S + A +
Sbjct: 1 DKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVGARNTQDAMSALRTGDAAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+++ +++ T D S+ E L ++ IA ++FNG +L
Sbjct: 61 GSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEIDHIAGKTNFNGNAFLNKGT 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ D I T V D
Sbjct: 121 KPEEGKDITIQLSDASSDTMTIAAIDTKAITTATLAVSADG 161
Score = 67.8 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 28/66 (42%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+DT I+ A GS +R+ + + + ++ DADMA E + ++ +
Sbjct: 177 LDTAIQSIADARATFGSQLNRLDHNLNNVTSQATNMAASASQIEDADMAKEMSNMTKFKI 236
Query: 428 QQQLAV 433
+ +
Sbjct: 237 LNEAGI 242
>gi|89214358|gb|ABD64491.1| flagellin [Bacillus weihenstephanensis]
Length = 219
Score = 86.3 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 44/113 (38%), Gaps = 3/113 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + + S + +A+A + +++
Sbjct: 1 EHLATGKKLNNASDNPANIAIVTRMHARESGMRVAIRNNEDAISMLRMAEAALQTVTNIL 60
Query: 89 STIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+++ + S+ E L Q+ I + FN +
Sbjct: 61 QRMRDLAVQSANGTNLNKNRNSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQN 113
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/218 (9%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + + G+ A + + + +
Sbjct: 2 HLATGKKLNNASDNPANIAIVTRMHARESGMRVAIRNNEDAISMLRMAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNLNKNRNSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTIDIAKYIPPSPTQHDIKISTEQEAKAAIRKIEEALQSVSLHRADLGAMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|39998133|ref|NP_954084.1| flagellar hook-associated protein FlgL [Geobacter sulfurreducens
PCA]
gi|39985079|gb|AAR36434.1| flagellar hook-associated protein FlgL [Geobacter sulfurreducens
PCA]
Length = 298
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 55/154 (35%), Gaps = 3/154 (1%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N +A L+ I E ++ + ++G++++ D+ MKS A S
Sbjct: 6 NTTANLVLNSLQTIRRRTEELEQQAATGVKINAPGDDPVTAQQILHMKSLMAAGDQYSRN 65
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIA 123
I G S + + +A M + +V++ K +S +EI QL++QL +
Sbjct: 66 ISNGISWLSMTEAAMDEMGNVLTRAKELTVQMANATSDAKARESGMNEIVQLRNQLIQLG 125
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157
+ + + G+
Sbjct: 126 NTQLNGRYVFGGFKNDTPPFDSTGAFNGTDDSIT 159
Score = 56.7 bits (134), Expect = 9e-06, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 39/81 (48%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
N++ A++ + ++ + + +G+ +R+ Q++ I+ M+ ++ K + D D
Sbjct: 204 ANDQTAVQAELPNLEDALSQVLSTRTDLGARMNRLEGQKNVIEEMKFSLTKVLSDKQDVD 263
Query: 415 MASESTRLSALQTQQQLAVQA 435
+ L+ QT + A+ A
Sbjct: 264 FMQVISDLTKQQTAFEAAIAA 284
>gi|114776444|ref|ZP_01451489.1| flagellar protein [Mariprofundus ferrooxydans PV-1]
gi|114553274|gb|EAU55672.1| flagellar protein [Mariprofundus ferrooxydans PV-1]
Length = 362
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 35/96 (36%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + + +G+ +++ + + + V + DADM
Sbjct: 267 TTNTDAQNYIDKASFALDKLITQRADLGATQNQLGFVQANLATSIEQTTASVSAIKDADM 326
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+E + + Q L+ N ++ +L+LFR
Sbjct: 327 AAEMANFTKNKILTQAGTSMLAQANQASQNVLTLFR 362
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 78/200 (39%), Gaps = 2/200 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M+A + L + + +R+SSG R++ AAD+++ ++I+ + + G L A S
Sbjct: 1 MTALKNLNTNSMAQDQSLNRLSSGFRINSAADDSSGFAISSKLDAQAGRLKAASQNATQA 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGV--ERGTDSKSIQSEITQLQSQLRDIARGSSF 128
++ V +A AG+++ ++ + I T + + +E +L++Q+ +IA +++
Sbjct: 61 TAMVKMADAGVNEIQNMFNRILTLATQASSGNNAGELAKLDAERIKLETQIDNIANSTNY 120
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
NG + L GSS A S G L +D +
Sbjct: 121 NGVSLLNGTSGSSATLAAPVAGISATVQATGAASGAVTLSTLTNAGGGIDITLTNAAGTA 180
Query: 189 LLDRNHKIKVEPQVLKDIDV 208
+
Sbjct: 181 QTVNVTVPAAGTTSSVAFND 200
>gi|157376209|ref|YP_001474809.1| flagellar hook-associated protein FlgL [Shewanella sediminis
HAW-EB3]
gi|157318583|gb|ABV37681.1| flagellar hook-associated protein 3 [Shewanella sediminis HAW-EB3]
Length = 396
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 44/434 (10%), Positives = 99/434 (22%), Gaps = 51/434 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + D + D++SSG +V+ A D+ + N +
Sbjct: 3 ISTAQMFNQGITSVLDRQSATSKILDQLSSGKKVNTAGDDPVAAVGIDNLNQQNALVDQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I ++ + I ++ + A ++ + + + V G Q +L+ L ++
Sbjct: 63 VKNIEYATNHLAITESKLGTAEKLVGSSRELVIRAVNGGLADSERQMIADELRGTLDELL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ E+ G+ T + A + V +
Sbjct: 123 SVANTKDESGNYMFSGNETGTQA-------------------FAFDATGNIVYSGDNGVR 163
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + D S + A + +Q
Sbjct: 164 QSVVASGVTIGTNIPGDSAFMNAPSGMGDYSANYLATQAGDFKVESAKITNPAVHVEQTY 223
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ L A S
Sbjct: 224 TFTMVGADLEIRDATNTLVQTEVNFDSS-------------------------------- 251
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + I + + + + +
Sbjct: 252 NPIVYNGLEVKLDGMPAAGDSFSISPAANVSIFDTINEAITLLESPNKINTPQGMAELAQ 311
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+++ ID+ + + G G+ + + + L D D AS T
Sbjct: 312 VLNNIDSGVNQISIERGVAGNNLKSLESHNMTHVEEKVVNSSALSMLEDLDYASAITEYE 371
Query: 424 ALQTQQQLAVQALS 437
Q S
Sbjct: 372 KQQLALNAVSNVFS 385
>gi|190890375|ref|YP_001976917.1| flagellin C protein [Rhizobium etli CIAT 652]
gi|218516720|ref|ZP_03513560.1| flagellin C protein [Rhizobium etli 8C-3]
gi|190695654|gb|ACE89739.1| flagellin C protein [Rhizobium etli CIAT 652]
Length = 342
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 75/287 (26%), Positives = 121/287 (42%), Gaps = 3/287 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT +T+ +A++A LR IN Q +VSSG R+ AAD+A+YWS+A +M+SD+ L
Sbjct: 23 MTVKITSAAAVNALSVLRSINKEASQTQQQVSSGYRIETAADDASYWSVATVMRSDSTNL 82
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
V DA+GLG++KVD M+ AID+++ I+ K+ A E GTD I +EI++ + QL+
Sbjct: 83 GTVGDALGLGAAKVDATYTAMTSAIDLVTQIRAKLVAAREPGTDKDKINAEISEYKDQLK 142
Query: 121 DIARGSSFNGENWLRTDLG---SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ +SF GENWL + + I+ V S + + L +
Sbjct: 143 TVVESTSFAGENWLLNSDKAAPPTWSVISGFVRASTGEYQAQSIDFPSSQTILIDKNNAS 202
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
++ + +L + + K A + +
Sbjct: 203 GGLFTKAVDAQAINNSGTGPRNYYLLDADSTTPATGTEVAIGKNTTDAQLADMLDVTDSL 262
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGN 284
A+I V + T+ S S SV A
Sbjct: 263 LSSLTTTSASIGVMKARIDDQIDYTADLSDSIDKSVGALVDTDMDEA 309
Score = 53.2 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 44/296 (14%), Positives = 99/296 (33%), Gaps = 2/296 (0%)
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
+ I+ D + ++ ++ L + + + ++ A
Sbjct: 48 QTQQQVSSGYRIETAADDASYWSVATVMRSDSTNLGTVGDALGLGAAKVDATYTAMTSAI 107
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
++ + KL + ++ + + + A S +P
Sbjct: 108 DLVTQIRAKLVAAREPGTDKDKINAEISEYKDQLKTVVESTSFAGENWLLNSDKAAPPTW 167
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + ++ + + + + + T +
Sbjct: 168 SVISGFVRASTGEYQAQSIDFPSSQTILIDKNNASGGLFTKAVDAQAINNSGTGPR--NY 225
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
T + +M+ D+ + T + IG + +RI Q D
Sbjct: 226 YLLDADSTTPATGTEVAIGKNTTDAQLADMLDVTDSLLSSLTTTSASIGVMKARIDDQID 285
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + D+++K VG LVD DM S R A++TQ+Q+AV+A+SI+N + ++IL L
Sbjct: 286 YTADLSDSIDKSVGALVDTDMDEASIRQKAIETQKQMAVEAISILNTAASKILILL 341
>gi|256830169|ref|YP_003158897.1| flagellar hook-associated protein 3 [Desulfomicrobium baculatum DSM
4028]
gi|256579345|gb|ACU90481.1| flagellar hook-associated protein 3 [Desulfomicrobium baculatum DSM
4028]
Length = 594
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 38/354 (10%), Positives = 102/354 (28%), Gaps = 10/354 (2%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
L+D L + + SS R++ +D+ + ++ ++ I
Sbjct: 13 LYNLQDTQSRLMDLNMQASSQKRINKPSDDPVGTARVLNYRTSLSSIDQYRSNIDTAKGW 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ +A M + +++ +K G +D ++ E+ Q+ SQL ++A S F G
Sbjct: 73 LGLADESMIQVSTLLTKLKGLAEQGASGTMTASDREATSYEVRQIFSQLVNLA-NSRFEG 131
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+A ++ + G + L + ++ +
Sbjct: 132 NAIFGGQKFDESAFEEALMVYDQDGNSLG------LATGLASRSFVVQFLGAEGTTVPVS 185
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
+ + + + D S + L + T+
Sbjct: 186 GTDCRFSKDGGATWETGTWDADGSLNLGGVSVSFPADYEVELSPESNKLMTKGSWLTVAP 245
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
+ ++ + S +++A + ++ V + +V
Sbjct: 246 TAVYKGDHESQSAVLYSAGSATISALPLGGFEKDVEVRVLGAVGAPGSGGTFQAEYSVDG 305
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
T VD +T + ++ ++ + + + + A
Sbjct: 306 TTWTTVTVDNIATPVIQTPYGGVQVTGSGNLTGVEFMVKSGSTGVIQMGAAVNA 359
Score = 50.5 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 34/76 (44%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
N++ E + + T + T +G+ +R+ + + + ++ + + + DAD+
Sbjct: 502 NDQQGCAEALDGLKTGHQYFTTQLASVGARENRLDVADTVLSGLKLNETERMSNVEDADL 561
Query: 416 ASESTRLSALQTQQQL 431
A+ T L+ Q +
Sbjct: 562 ATLLTELANQQLSYEA 577
>gi|302383743|ref|YP_003819566.1| flagellin domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302194371|gb|ADL01943.1| flagellin domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 276
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 3/219 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN +A A Q L N NL VQ+RVS+GL+V A DNAA W+IAQ ++D GALSA
Sbjct: 4 SVHTNAAAAVALQNLSRTNDNLTGVQNRVSTGLKVQGAKDNAAIWAIAQGQRADIGALSA 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
V ++ +S D+A + D+++ +K K+ A + + S+ L +
Sbjct: 64 VKQSLDRATSIADVALSAGESVSDLLNQLKEKVVAAKDVSLGTQSRALLNSDFKALLRAI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ +SF+G N L L + +A + SF+ + ++ L LL
Sbjct: 124 KSAVENASFDGGNILNGSLTNGLKFLANADATSFVTLSGKNLTLSGSIISLGLADSLLTV 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+ T L + + + + S ++
Sbjct: 184 TGATTALTKLDNSITALNSALGDIGAQAKQISAHSTFVT 222
Score = 75.9 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/95 (42%), Positives = 54/95 (56%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ +D I +A G IG+ + +I F+ + D +E G+G LVDAD+A
Sbjct: 182 TVTGATTALTKLDNSITALNSALGDIGAQAKQISAHSTFVTKLSDTLESGIGNLVDADLA 241
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ES RL ALQ QQQL QALSI N + ILSLF+
Sbjct: 242 KESARLQALQVQQQLGAQALSIANQAPQIILSLFQ 276
>gi|89214262|gb|ABD64443.1| flagellin [Bacillus thuringiensis serovar azorensis]
gi|89214278|gb|ABD64451.1| flagellin [Bacillus thuringiensis serovar zhaodongensis]
Length = 219
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + + S + +A + A +++
Sbjct: 1 EHLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTVEAALQTATNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAIQSANGTNSNKNRHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IGHTINMPKHIPPSPTQHDIKIST 144
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTVEAALQTATNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAIQSANGTNSNKNRHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTINMPKHIPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|544303|sp|P35633|FLA1_BARBA RecName: Full=Flagellin
gi|28194497|gb|AAO33575.1|AF478358_1 truncated flagellin protein [Bartonella bacilliformis]
gi|304185|gb|AAA22899.1| flagellin [Bartonella bacilliformis]
Length = 375
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 1/179 (0%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+SILTN SAM+A Q LR+I+ NL+ +DR+S+GLR+ A+DN AYWSI+ +MK D+ +S
Sbjct: 3 SSILTNRSAMTALQTLRNIDNNLDKSKDRISTGLRIGSASDNTAYWSISSMMKHDSNTMS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE-RGTDSKSIQSEITQLQSQLR 120
AV DAI LG +V++A ++ + + I+ + + E D IQ I +
Sbjct: 63 AVVDAINLGREQVNVAATAVNLTKESLDDIQKSMVSAREKSDDDIMKIQDSIKGNMQNIS 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ + ++F G+N L + GS + D +V +++ + +D
Sbjct: 123 NAIQSAAFGGKNILSNGGEKVGIAAGYRREGSAVYVDMIEVGGAELNFGVMGPDGTIDM 181
Score = 66.7 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 49/93 (52%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
+ + + + + + + + + A KIGS +++ Q +F+K +
Sbjct: 269 NDFVQMQGVGGLPSVAQSIILNSVQKTVRHAVDVTLTAGSKIGSAVNQVDSQLNFVKRLL 328
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
D +E G+G LVDADM +ES +LSALQ QQQL +
Sbjct: 329 DNIEAGIGALVDADMNAESAKLSALQVQQQLGI 361
>gi|89214310|gb|ABD64467.1| flagellin [Bacillus thuringiensis serovar canadensis]
Length = 219
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNNASDNPANIVIVTRMHARANGMRVAIRNNEDAISMLRTAEATLQTVTNIL 60
Query: 89 STIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANSTNSNKNRHSLNKEFQFLAEQIGYIGETTEFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVHISKSIPPSPTQHDIKIST 144
Score = 67.1 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/218 (10%), Positives = 63/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T T + + +
Sbjct: 2 HLATGKKLNNASDNPANIVIVTRMHARANGMRVAIRNNEDAISMLRTAEATLQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T + + + L
Sbjct: 62 RMRDLAVQSANSTNSNKNRHSLNKEFQFLAEQIGYIGETTEFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + ++ + + + + + I+ ++ + +G++ + + +
Sbjct: 122 GHTVHISKSIPPSPTQHDIKISTEQEARAAIRKIEEALQSVSLHRADLGAMINHLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQGMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|209963552|ref|YP_002296467.1| flagellin protein FlaB (LafA), putative [Rhodospirillum centenum
SW]
gi|209957018|gb|ACI97654.1| flagellin protein FlaB (LafA), putative [Rhodospirillum centenum
SW]
Length = 288
Score = 86.3 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 50/177 (28%), Positives = 87/177 (49%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+SILTN AM A Q L + +L+ VQDR+S+G++V+ A DN++YW IA MK+D AL
Sbjct: 4 SSILTNTGAMVALQTLNRTSKDLQTVQDRISTGMKVATAKDNSSYWGIATTMKADVSALK 63
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
A+++ I + ++ V A+ G +++S +K+++ D I +E+T LQ+Q+ +
Sbjct: 64 ALNENISINAATVQTARVGTENIQNLLSQVKSQLALATTASVDHSKITAELTSLQNQITN 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+S+NGEN L + + + +
Sbjct: 124 TINAASYNGENLLNNTTARTLVVSINRSATGISAVTDSVSGVDLTAVATAVGGYVTA 180
Score = 64.4 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 69/141 (48%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ + + + ++ G + + A A A+ + + ++
Sbjct: 148 INRSATGISAVTDSVSGVDLTAVATAVGGYVTAITGGADAAAKAAAANTALTDATTGVEA 207
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
QI AA G+I R+ LQ DF + D++ +G+G LVDA++ ES RL ALQ QQQ
Sbjct: 208 QITTVVNAASSFGNIGKRLELQADFTSKLIDSLNEGIGTLVDANLNEESARLQALQVQQQ 267
Query: 431 LAVQALSIVNNSTARILSLFR 451
L +QALSI N + ILSLFR
Sbjct: 268 LGIQALSIANGAPQNILSLFR 288
>gi|89214222|gb|ABD64423.1| flagellin [Bacillus thuringiensis serovar sooncheon]
gi|89214362|gb|ABD64493.1| flagellin [Bacillus thuringiensis serovar amagiensis]
Length = 219
Score = 86.3 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNNASDNPTNIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSSNGTNSNANRDSLNKEFQSLTEQIGYIGETTEFNDLSVFGGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IGHTINMTKHIPPSPAQHDIKIST 144
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 63/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNNASDNPTNIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++ A + T T + + + L
Sbjct: 62 RMRDLAVQSSNGTNSNANRDSLNKEFQSLTEQIGYIGETTEFNDLSVFGGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTINMTKHIPPSPAQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGAMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|73539457|ref|YP_299824.1| flagellar hook-associated protein FlgL [Ralstonia eutropha JMP134]
gi|72122794|gb|AAZ64980.1| Flagellin, N-terminal [Ralstonia eutropha JMP134]
Length = 404
Score = 86.3 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 50/438 (11%), Positives = 109/438 (24%), Gaps = 49/438 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T+ + +L +Q ++ +G +V +D+ + A + +
Sbjct: 3 VATSTLYQQGLASMNMQQSSLLHIQQQLGTGRKVLTPSDDPVAATRALGVTQASAINDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ---SQLR 120
+ + + + + + +S V I+ + S T L+ QL
Sbjct: 63 TTSRNQANISLGMEENTLSTVTTVTQNIQTLLVQAGNGTLSDVDRASLATALKGQYEQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A NG+ L S + +I + + + + + +
Sbjct: 123 GLANADDGNGQYLFGGTLSGSPPFVQGGGSVQYIGNTEQQQYQVDVARQMPAGSNGREVF 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G + + + + + + +SG+
Sbjct: 183 QSVQGSAGYVLKGNSANTGSATYGQVSTTDPTNPLYGTPLTLTFDDSSGSMQYTITDPSG 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
G + P A T
Sbjct: 243 NPVGGTPLAYTDPGQIAVAGVTFT------------------------------------ 266
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
V DT S S+ + + L+ H++ D+ N
Sbjct: 267 ----------VKGAPKTGDTISIQPASQAGTDMFANLKSVIDALDAPVHSDADSANLNNV 316
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + + +GS + + + + L D D AS T
Sbjct: 317 IATGIRQFSNSLDNVLTVRASVGSRMQELDALDTIGTNRGLNYTETLSGLQDLDYASAIT 376
Query: 421 RLSALQTQQQLAVQALSI 438
QT Q A Q+
Sbjct: 377 EYYQRQTALQGAQQSFMQ 394
>gi|89214208|gb|ABD64416.1| flagellin [Bacillus thuringiensis serovar leesis]
Length = 219
Score = 86.3 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 44/144 (30%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G + ++A+DN +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKFNNASDNPTNIAIGTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRHSLNKEFQSLAEQIGYIGETTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IGHTINMTKHIPPSPTQHDIKIST 144
Score = 64.8 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/218 (10%), Positives = 61/218 (27%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KKF A+ + + +A G+ A + T + + +
Sbjct: 2 HLATGKKFNNASDNPTNIAIGTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRHSLNKEFQSLAEQIGYIGETTEFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +GS+ +R+ +
Sbjct: 122 GHTINMTKHIPPSPTQHDIKISTEQEARAAILKIEEALQNVSLHRADLGSMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ ++ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDTASQVEDADMAQEISDFLKFKLLTEVA 219
>gi|83955128|ref|ZP_00963784.1| hypothetical protein NAS141_03446 [Sulfitobacter sp. NAS-14.1]
gi|83840457|gb|EAP79630.1| hypothetical protein NAS141_03446 [Sulfitobacter sp. NAS-14.1]
Length = 269
Score = 86.3 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 47/80 (58%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ + AA +G + + Q F+ + D ++ GV +VDADM E+ RL A Q QQQL
Sbjct: 190 LAKSITAATSLGITENTLDGQMQFLDALTDTLDSGVSSMVDADMEEEAARLQAYQVQQQL 249
Query: 432 AVQALSIVNNSTARILSLFR 451
A Q+LSI N + ILSLFR
Sbjct: 250 ATQSLSIANQAPQNILSLFR 269
Score = 64.4 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/232 (17%), Positives = 85/232 (36%)
Query: 24 LEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSK 83
+ QDRVS+GL+V+ DNAAY+++++ MK D+G A+++ + + V A+ G
Sbjct: 1 MNETQDRVSTGLKVASGKDNAAYFAVSETMKGDSGMFKAINEGMTATKNSVATARLGAET 60
Query: 84 AIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTA 143
D+ I ++ G + +Q EI L + S+FNG+N + D G
Sbjct: 61 VADIAQQIVERVAFAQTEGVNRADVQLEIDALVENMTSAINQSTFNGDNLVDGDYGFEAD 120
Query: 144 SIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
+ + + V L + D + + + +
Sbjct: 121 GTTAKTSVTVVNGITRGASGGITATTFEFSEVNLGAIKDEFAKIDVTNTTTGAADGETLA 180
Query: 204 KDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + + + +I+ T + + + + + A
Sbjct: 181 TKLQFAEVELAKSITAATSLGITENTLDGQMQFLDALTDTLDSGVSSMVDAD 232
>gi|298507070|gb|ADI85793.1| flagellar hook-filament junction protein FlgL [Geobacter
sulfurreducens KN400]
Length = 298
Score = 86.3 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 55/154 (35%), Gaps = 3/154 (1%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N +A L+ I E ++ + ++G++++ D+ MKS A S
Sbjct: 6 NTTANLVLNSLQTIRRRTEELEQQAATGVKINAPGDDPVTAQQILHMKSLMAAGGQYSRN 65
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIA 123
I G S + + +A M + +V++ K +S +EI QL++QL +
Sbjct: 66 ISNGISWLSMTEAAMDEMGNVLTRAKELTVQMANATSDAKARESGMNEIVQLRNQLIQLG 125
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157
+ + + G+
Sbjct: 126 NTQLNGRYVFGGFKNDTPPFDSTGAFNGTDDSIT 159
Score = 56.7 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 39/81 (48%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
N++ A++ + ++ + + +G+ +R+ Q++ I+ M+ ++ K + D D
Sbjct: 204 ANDQTAVQAELPNLEDALSQVLSTRTDLGARMNRLEGQKNVIEEMKFSLTKVLSDKQDVD 263
Query: 415 MASESTRLSALQTQQQLAVQA 435
+ L+ QT + A+ A
Sbjct: 264 FMQVISDLTKQQTAFEAAIAA 284
>gi|285027208|gb|ADC34074.1| flagellin [Bacillus thuringiensis serovar japonensis]
Length = 209
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 46/146 (31%), Gaps = 3/146 (2%)
Query: 27 VQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAID 86
+ +++G +++ A+DN A +I M + + S + A+A + +
Sbjct: 1 AMEHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTN 60
Query: 87 VMSTIKNKITAGVERGTDSKS---IQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTA 143
++ +++ +K+ + E L Q+ I + FN + T
Sbjct: 61 ILQRMRDLAVQSSNGTNSNKNCHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITL 120
Query: 144 SIAKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 DDIGHTINMTKHIPPSPTQHDIKIST 146
Score = 63.2 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 21/208 (10%), Positives = 58/208 (27%)
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ KK A+ + A + +A G+ A + T + +
Sbjct: 2 MEHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNI 61
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ ++ + T T + + + L
Sbjct: 62 LQRMRDLAVQSSNGTNSNKNCHSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLD 121
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + + I+ ++ + +G++ +R+
Sbjct: 122 DIGHTINMTKHIPPSPTQHDIKISTEQEARTAIRKIEEALQSVSLHRADLGAMINRLQFN 181
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + A+ + DADMA E +
Sbjct: 182 IENLNNQSMALTDAASLIEDADMAQEMS 209
>gi|218289683|ref|ZP_03493891.1| flagellin domain protein [Alicyclobacillus acidocaldarius LAA1]
gi|218240140|gb|EED07324.1| flagellin domain protein [Alicyclobacillus acidocaldarius LAA1]
Length = 284
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 3/140 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ N SA S L+ +N + ++S+G R++ AAD+ A ++IAQ M + AL+
Sbjct: 6 SVNNNASAASILSNLQYVNNEINTSYQQLSTGNRINSAADDPAGYAIAQQMTAQVNALNQ 65
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
G S + A M++ ++ T+ +S ++ E LQ+Q+
Sbjct: 66 AIQNAQNGISMLQTASGAMNQVTSILQTMNTLAVEAANGTENSTDLSNLDQEFVALQNQI 125
Query: 120 RDIARGSSFNGENWLRTDLG 139
+IA + FN L
Sbjct: 126 NNIASQTKFNTMTLLDGSFA 145
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/284 (8%), Positives = 74/284 (26%)
Query: 168 YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
L+ S+ ++ + + S D + + A
Sbjct: 1 MSLNFSVNNNASAASILSNLQYVNNEINTSYQQLSTGNRINSAADDPAGYAIAQQMTAQV 60
Query: 228 SGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
+ NA + + + + + ++
Sbjct: 61 NALNQAIQNAQNGISMLQTASGAMNQVTSILQTMNTLAVEAANGTENSTDLSNLDQEFVA 120
Query: 288 WVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT 347
+ + ++ + + + + + +
Sbjct: 121 LQNQINNIASQTKFNTMTLLDGSFASSGVVFQINTDSTTNSQLTVTIAAVSIGALFSSAV 180
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
+ ++ +S + I +A ++G++ +++ ++ D ++
Sbjct: 181 LSGGYLHITSQTLAQQAISVVQAAITSLSAYQAQVGAVEDQLNYTVSNLQNTADNLQNAE 240
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ + DMA T S Q QQ+ + L+ + IL L +
Sbjct: 241 STITNTDMAKAYTEFSQQQVLQQVGLAMLAQADQQPDAILKLLQ 284
>gi|39933717|ref|NP_945993.1| putative flagellin [Rhodopseudomonas palustris CGA009]
gi|192289137|ref|YP_001989742.1| flagellin domain protein [Rhodopseudomonas palustris TIE-1]
gi|39647564|emb|CAE26084.1| putative flagellin [Rhodopseudomonas palustris CGA009]
gi|192282886|gb|ACE99266.1| flagellin domain protein [Rhodopseudomonas palustris TIE-1]
Length = 274
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 3/141 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +I TN +A SA + L + +++SG R++ A+D+AA +I+ + SD L
Sbjct: 1 MPAISTNTAANSAVRYLNINSAQETSSLSKLASGSRITSASDDAAGLAISTRISSDVTTL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI---TAGVERGTDSKSIQSEITQLQS 117
+ + + A G S D+++ +K+ +G + I SE +QL S
Sbjct: 61 QQAATNASQAVAILQTADGGASNISDILARMKSLASESASGTTTDSSRAYINSEFSQLSS 120
Query: 118 QLRDIARGSSFNGENWLRTDL 138
Q+ IA G+ ++ ++ L
Sbjct: 121 QIDSIASGTRYSSQSLLDGTS 141
Score = 62.8 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 42/96 (43%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +S +DT I ++A IG+ SR + D I ++ + D D
Sbjct: 178 VSSLSGATTALSALDTAINTVSSARASIGAQESRFNFSADSISTQTQNLQSANSAIKDVD 237
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+A+E +LS+ + + Q AV A + N +L L
Sbjct: 238 IAAEQAKLSSAEVKTQAAVSAEAAANQMPQYLLKLL 273
>gi|13472584|ref|NP_104151.1| flagellin(flaA) [Mesorhizobium loti MAFF303099]
gi|14023330|dbj|BAB49937.1| flagellin; FlaA [Mesorhizobium loti MAFF303099]
Length = 356
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 1/173 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI+TN +A++A Q L N +LE Q R+S+G RVS+A+DNAAYWSIA M+SDN AL
Sbjct: 1 MASIMTNAAALTALQSLNATNKSLEHTQSRISTGYRVSEASDNAAYWSIATTMRSDNQAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN-KITAGVERGTDSKSIQSEITQLQSQL 119
S V DA+GLG+SKVD A GM+ + + +K ++ + Q+EIT LQ+Q+
Sbjct: 61 STVQDALGLGASKVDTAYTGMNNVLTSIGQLKTKLLSTIGQTAAAKAKTQTEITTLQAQM 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
+ A ++F+G N+L A + I + I
Sbjct: 121 KSFADAATFSGSNYLSVTSTQVAAPNDGVQANAKIVASFNRSSSGAISLGTID 173
Score = 63.6 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 45/95 (47%), Positives = 63/95 (66%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ +M+ ID + T A +G+ S I LQ+ F + + D++++GVG+LVDADM
Sbjct: 260 TDDIITQMIGKIDKVMSQLTDQATILGAAKSSIDLQKTFTQSLMDSIDRGVGQLVDADMN 319
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ESTRL ALQ QQQL +QALSI N+S+ ILSLF+
Sbjct: 320 KESTRLQALQVQQQLGIQALSIANSSSQSILSLFK 354
>gi|89214246|gb|ABD64435.1| flagellin [Bacillus thuringiensis serovar poloniensis]
Length = 219
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 47/144 (32%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I ++FN + T
Sbjct: 61 QRMRDVAVQSANGTNSNENRDSLNKEFQSLTEQIGYIDETTAFNDLSLFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNVTKHIPPSPTQHDINIST 144
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDVAVQSANGTNSNENRDSLNKEFQSLTEQIGYIDETTAFNDLSLFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNVTKHIPPSPTQHDINISTEQEARAAIRKIEEALQNVSLHRTDLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSTALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|315649833|ref|ZP_07902916.1| flagellar hook-associated protein 3 [Paenibacillus vortex V453]
gi|315274807|gb|EFU38188.1| flagellar hook-associated protein 3 [Paenibacillus vortex V453]
Length = 286
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 51/168 (30%), Gaps = 4/168 (2%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDI 76
L+ L+ Q+++ + R++ +D+ + A + A + S +
Sbjct: 5 LQGNYRRLDKYQEQMMTQRRINRPSDDPVGVAAALQYRGQITATTQFEQNAEDADSWLKY 64
Query: 77 AKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLRDIARGSSFNGENW 133
M++ ++ + G ++I +E+ QL QL + S F G+
Sbjct: 65 GDTVMTEVTQIIQKLSELAVQGGTDTVPADARENIAAEVEQLYQQLVSL-GNSQFKGKYI 123
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ ++ D+ + T
Sbjct: 124 FNGERTDEKPFPDDPTQTAYALDNGEVRYQVGAGITVSVNTPGEQVFG 171
Score = 50.9 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/161 (9%), Positives = 52/161 (32%)
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
G T + DP T + + + ++++ +
Sbjct: 114 GNSQFKGKYIFNGERTDEKPFPDDPTQTAYALDNGEVRYQVGAGITVSVNTPGEQVFGAF 173
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
S + + + N+ A++ ++ + ++ A ++G +R+ +
Sbjct: 174 GDASGIFVVVDNFKKALLANDTTAIQNSITNLQKNLETTITAQAEMGGKQNRLEFTLSRL 233
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+ ++ DAD++ L ++ Q ++ ++
Sbjct: 234 GDLNINYMDLQSKIEDADISKVIIDLKTSESVYQASLDTMA 274
>gi|315500089|ref|YP_004088892.1| flagellin domain protein [Asticcacaulis excentricus CB 48]
gi|315418101|gb|ADU14741.1| flagellin domain protein [Asticcacaulis excentricus CB 48]
Length = 277
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 3/179 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN +AM+A Q L LE Q ++S+GL VS A DNAA +SIAQ ++D +LSA
Sbjct: 5 SVNTNKTAMTALQNLNATTRKLESTQTKISTGLEVSSAKDNAALYSIAQGQRADLSSLSA 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
V +++ +S D+ A D++ +++K+ + ++ ++ + +L Q+
Sbjct: 65 VKNSLNRATSVADVTLAAGESVSDLLVQMRDKVVSAMDPSLSTASRNALNGDFRELLRQI 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
SSF+G N L + + I + S + + + + +L
Sbjct: 125 SHAVANSSFDGTNLLNGSITNGIKFIDNADGSSVVTLSSRNFSLGGAIITMSAAADVLT 183
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/104 (37%), Positives = 56/104 (53%)
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
+ ++ +D I A+ +GS + +I +++F+ + A+E G+
Sbjct: 174 TMSAAADVLTLTKATSALARLDASINNVNASLAALGSEAKQIEGRQNFVAKLSGAIEVGI 233
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
G LVDAD+A ES RL ALQ QQQL QALSI N S IL LF+
Sbjct: 234 GNLVDADLAKESARLQALQVQQQLGTQALSIANQSPQAILRLFQ 277
>gi|313905170|ref|ZP_07838539.1| flagellin domain protein [Eubacterium cellulosolvens 6]
gi|313470073|gb|EFR65406.1| flagellin domain protein [Eubacterium cellulosolvens 6]
Length = 83
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 37/82 (45%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I N A +A + L L +++SSG R++ AAD+AA +I++ M+S L
Sbjct: 2 VIQHNIPATNAYRNLTSNRSGLSKNLEKLSSGFRINRAADDAAGLAISEAMRSKINGLDQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKA 84
+ + + +++
Sbjct: 62 ATANANDAIGLIQTEEGALTET 83
>gi|254503983|ref|ZP_05116134.1| Bacterial flagellin N-terminus domain protein [Labrenzia alexandrii
DFL-11]
gi|222440054|gb|EEE46733.1| Bacterial flagellin N-terminus domain protein [Labrenzia alexandrii
DFL-11]
Length = 320
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/125 (41%), Positives = 79/125 (63%), Gaps = 1/125 (0%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M+A Q L N N+ Q+R+S+GLRV+DAADNAAYWSIA M+SD GALSAV D++GLG
Sbjct: 1 MTALQTLSMTNKNMATTQNRISTGLRVNDAADNAAYWSIATTMRSDVGALSAVQDSLGLG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKIT-AGVERGTDSKSIQSEITQLQSQLRDIARGSSFN 129
++ +D+ ++ +D ++ IK K+ A + + + IQ +I+ LQ QL A + +
Sbjct: 61 AATLDVTFTAINSTVDTLNEIKEKLVAAKGQTDSGREKIQEDISNLQKQLETYANSAVTS 120
Query: 130 GENWL 134
+
Sbjct: 121 SGDNW 125
Score = 73.6 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 50/97 (51%), Positives = 66/97 (68%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
N+K ++ +V+ +D +I T AA IGS R+ Q DF+K + D+ +G+G+LVDAD
Sbjct: 224 ANDKYVVDGLVAVVDQKIAALTDAATTIGSSKKRVDSQMDFVKALSDSYTRGIGQLVDAD 283
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
M +ESTRL ALQTQQQL +QALSI N ILSLFR
Sbjct: 284 MNAESTRLQALQTQQQLGIQALSIANQGAQNILSLFR 320
>gi|206889250|ref|YP_002249840.1| flagellar hook-associated protein 3 [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206741188|gb|ACI20245.1| flagellar hook-associated protein 3 [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 475
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 50/444 (11%), Positives = 103/444 (23%), Gaps = 27/444 (6%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ + Q ++++G RV +D+ S K++ AL S I
Sbjct: 14 NDMNTQIEAMYKAQKQLTTGKRVLSPSDDPVAISRIVKYKTELSALDEYSRVIDTAKIYN 73
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQS-QLRDIARGSSFNG 130
+ ++ ++ K G TD ++ E+ L + I S
Sbjct: 74 SSLETAINDLKNMAIKAKQYAVNGSTDTLSATDRLALAQEVDTLIQRSIETINTKVSGRY 133
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE---TVLLDSSTDGTERY 187
S + L T +D +
Sbjct: 134 IFGGYKADTPPVNSTTGLYQSDTNLQYLDISFFLDVAVNLPATEFFTYQVDPTDPYGNIK 193
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
N + L D D S T +
Sbjct: 194 VFTPYNQTVTTSGTQLHDADPLSALLMPQPSGGAITDPTAGFTTNGGTLTIQLGDNESVS 253
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
+ + A+ + V + N + ST
Sbjct: 254 VTISSGASLNDVRDAINSQAGDYVKAWVVNVGTSGSPDYRLVINSVPNGKSDKIRIQVST 313
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY------------ 355
+ + S L I+ + + + +
Sbjct: 314 TDAANTGLNLLSYNPDSGSSNMSLEGNINGYNYITDPTDPNYYSFNNNYLNENYYLRALY 373
Query: 356 --------NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
N++ +++ V + D IG+ ++I D+ ++ + +
Sbjct: 374 FLKVALENNDQGRIQKAVDYFDKIADKLYKQQSIIGARLNKIESITDYNLEVKTNTNQNL 433
Query: 408 GRLVDADMASESTRLSALQTQQQL 431
DAD + L+ T Q
Sbjct: 434 SNDQDADALQVISELNQRMTVLQA 457
>gi|89214248|gb|ABD64436.1| flagellin [Bacillus thuringiensis serovar tohokuensis]
gi|89214328|gb|ABD64476.1| flagellin [Bacillus thuringiensis serovar bolivia]
Length = 219
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + L S + A+A + +++
Sbjct: 1 EHLATGKKLNNASDNPANIAIVTRMHARACGLRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + N + + T
Sbjct: 61 QRMRDLAVQSSNGTNSNANRDSLNKEFQSLTEQISYIGETTELNDLSVFDSQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IGHTINMTKHIPPSPTQHDIKIST 144
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 64/218 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNNASDNPANIAIVTRMHARACGLRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++ A + T T + + + L
Sbjct: 62 RMRDLAVQSSNGTNSNANRDSLNKEFQSLTEQISYIGETTELNDLSVFDSQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +GS+ +R+ +
Sbjct: 122 GHTINMTKHIPPSPTQHDIKISTEQEARAAILKIEEALQNVSLHRADLGSMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ ++ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDTASQVEDADMAQEISDFLKFKLLTKVA 219
>gi|296330252|ref|ZP_06872733.1| flagellar hook-associated protein FlgL [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305676143|ref|YP_003867815.1| flagellar hook-filament junction [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296152520|gb|EFG93388.1| flagellar hook-associated protein FlgL [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414387|gb|ADM39506.1| flagellar hook-filament junction [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 298
Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 55/140 (39%), Gaps = 3/140 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++ + + L+ +Q ++SSG ++S A+D+ + + +
Sbjct: 10 QNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNNQLSQVQQYQSNASQA 69
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSS 127
+ ++ + +++ ID++S ++ + ++I E+ QL+ QL +IA
Sbjct: 70 FTWLENTETNITEGIDILSKVRELAVQAQSDTNGEAERQAIGVEVKQLKEQLLNIANTQV 129
Query: 128 FNGENWLRTDLGSSTASIAK 147
+ T+ +
Sbjct: 130 NGRYIFNGTNSDKPPVTDNG 149
Score = 44.7 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 35/125 (28%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + K V + + M+ ++ ID
Sbjct: 163 VNISNNMTLKVNSDPKSAFGGTSESGQNVFEMLDSFEKALSSGSIDGMDSVLDDIDQFSG 222
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+A +G+ +R+ L + + K + D ++ T A Q+ + +
Sbjct: 223 GMSAERSDLGARYNRLELVNTRLSAQEETATKVLSDNEDVELEEIITEFIAQQSVHRATL 282
Query: 434 QALSI 438
+
Sbjct: 283 AVNAQ 287
>gi|295690925|ref|YP_003594618.1| flagellin domain-containing protein [Caulobacter segnis ATCC 21756]
gi|295432828|gb|ADG12000.1| flagellin domain protein [Caulobacter segnis ATCC 21756]
Length = 275
Score = 85.6 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 80/206 (38%), Gaps = 3/206 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN A+ A Q L N L VQ R+++G +V+ A DN A W++A+ + +L++
Sbjct: 5 SINTNSGALIALQNLNATNSELGTVQQRINTGKKVATAKDNGAIWAMAKTQSATASSLNS 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQL 119
V D++ G S +D+A A D++ +K K A + ++ S + + L+ Q+
Sbjct: 65 VKDSLQRGQSTIDVALAAGDTITDLLGKMKEKALAASDSSLNTASFNALKSDFESLRKQI 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
A S FNG + + S T G + + +
Sbjct: 125 TKAATNSKFNGASLATGSVASMTFLANSDGSGLTVSAQTLSLGGLALTTAAAAAFTTATE 184
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKD 205
+ + K+
Sbjct: 185 AKAMIAKVDSAIGTATNKLAALGTAS 210
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
M++ +D+ I AT +G+ S+ + FI ++D+++ GVG LVDAD+A ES +L
Sbjct: 188 MIAKVDSAIGTATNKLAALGTASTGLDTHLTFIGKLQDSLDAGVGNLVDADLAKESAKLQ 247
Query: 424 ALQTQQQLAVQA 435
+LQT+QQL +QA
Sbjct: 248 SLQTKQQLGIQA 259
>gi|218529400|ref|YP_002420216.1| hypothetical protein Mchl_1408 [Methylobacterium chloromethanicum
CM4]
gi|218521703|gb|ACK82288.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 399
Score = 85.6 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 64/452 (14%), Positives = 128/452 (28%), Gaps = 54/452 (11%)
Query: 1 MTS-ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M+S I + + L+D + Q+R+++GL+VS A D+ + AQ + + +
Sbjct: 1 MSSGITLSSATRQNLLSLQDTSALTATTQNRLATGLKVSSALDSPVNFFTAQNLSNRSTD 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQL 119
L + D I G + A G++ ++ + K+ + + +
Sbjct: 61 LGGLLDGISNGVQAIQAANQGITSIQKLIDSAKSTANQALSTQITTTGTAA--------- 111
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
F ++ + S
Sbjct: 112 -------------------------------TDFAASTTSATTVSFFVNGTSKTATIATS 140
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
ST L V ++ +T + A A A A
Sbjct: 141 STIDAAITSLNTAAGSTMFSKDTTGKKIVLNASSAVEFATTGSQTALGFDAGTGTATADK 200
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
S + + + + S
Sbjct: 201 YGTGNTVAGNSANLTISGVETRAKLAEQYNSLLTQITQLAKDSSFNGTNLISNGDPSNKL 260
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + + L S +G L+
Sbjct: 261 HIAFNEKDTSNLDVQGKDLTADGLKLTSITGNSGATANGQGNFLLDTDIKGT-------- 312
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ + + +A+ GS S + ++DF K + + ++ G L +AD+ E+
Sbjct: 313 -----LTKLTSGSDTLRSASSTFGSNLSVVQNRQDFTKRLVNILDTGASNLTNADLNEEA 367
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
AL T+Q L + ALS+ N + IL L R
Sbjct: 368 ANSQALSTRQSLGISALSLANQAQQGILQLLR 399
>gi|326386943|ref|ZP_08208557.1| flagellin-like protein [Novosphingobium nitrogenifigens DSM 19370]
gi|326208623|gb|EGD59426.1| flagellin-like protein [Novosphingobium nitrogenifigens DSM 19370]
Length = 291
Score = 85.6 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 53/285 (18%), Positives = 96/285 (33%), Gaps = 3/285 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I TN SA+ A+ R+S+G R++ AAD+AA +I M S +
Sbjct: 1 MTVINTNISAIQAANASNSAASMTSTAMQRLSTGKRINSAADDAAGLAITNSMTSQINGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQS 117
G S A +++ +++ ++ S+QSE+T L
Sbjct: 61 QQGVSNANDGISLAQTAGGALNEVTNMLQRVRQLAVQSSSGTYQNSDRTSMQSEVTNLTQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ DI ++FNG G++T++ KS + V I + +
Sbjct: 121 QISDILNNTTFNGNKVFNVAAGTATSADDKSFTIQTGANATDTVAIVSKAFSSSNLFDAT 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
D+S + LD + + + + + + + TS N
Sbjct: 181 DTSYNSAAATQALDVSTQANATTTLTNVDNALAEVNATQATLGAGQNRLTSVVNNLNDNI 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
T + A S + S +A + +
Sbjct: 241 TNLSSARSRIQDTDYSATTTQLAKAQILSQASSAMIAQANQSQQN 285
Score = 74.8 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/291 (10%), Positives = 78/291 (26%)
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ + + +S+ T K + I+
Sbjct: 1 MTVINTNISAIQAANASNSAASMTSTAMQRLSTGKRINSAADDAAGLAITNSMTSQINGM 60
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ ++ + A A + + A + + T S S +
Sbjct: 61 QQGVSNANDGISLAQTAGGALNEVTNMLQRVRQLAVQSSSGTYQNSDRTSMQSEVTNLTQ 120
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
++ + G S K + T K +
Sbjct: 121 QISDILNNTTFNGNKVFNVAAGTATSADDKSFTIQTGANATDTVAIVSKAFSSSNLFDAT 180
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
+ N + + ++ +D + A +G+ +R+ + +
Sbjct: 181 DTSYNSAAATQALDVSTQANATTTLTNVDNALAEVNATQATLGAGQNRLTSVVNNLNDNI 240
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ R+ D D ++ +T+L+ Q Q + ++ N S +LSL +
Sbjct: 241 TNLSSARSRIQDTDYSATTTQLAKAQILSQASSAMIAQANQSQQNVLSLLK 291
>gi|87242406|gb|ABD33742.1| flagellin [Bacillus thuringiensis serovar mexicanensis]
Length = 233
Score = 85.6 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/222 (14%), Positives = 75/222 (33%), Gaps = 3/222 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ +R+SSG ++ AAD+AA +IA M++ G L+ + S + + +
Sbjct: 1 DKMNTAMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVGARNTQDAMSALRTTDSAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +++ +++ T D S+ E +L+ ++ IA ++FNG+ L
Sbjct: 61 NSISNILLRMRDIATQSANGTNDTKDQDSLDLEFQELKGEITHIAEKTNFNGKTLLAGVA 120
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
++ + S + ++S T + +
Sbjct: 121 AANNIDVQLSDVSGDKLTITAIDATAATLKITGDVKSTKNASDSITALDAAIQTVADNRA 180
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + ST A+ A +
Sbjct: 181 TFGSQLNRLDHNLNNVNSQSTNMAAAASQIEDADMAKEMSNM 222
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 15/131 (11%), Positives = 39/131 (29%)
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
+ G T + +D + + + T
Sbjct: 103 HIAEKTNFNGKTLLAGVAAANNIDVQLSDVSGDKLTITAIDATAATLKITGDVKSTKNAS 162
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ ++ +D I+ GS +R+ + + + ++ DADMA E + +
Sbjct: 163 DSITALDAAIQTVADNRATFGSQLNRLDHNLNNVNSQSTNMAAAASQIEDADMAKEMSNM 222
Query: 423 SALQTQQQLAV 433
+ + + +
Sbjct: 223 TKFKILNEAGI 233
>gi|28211375|ref|NP_782319.1| flagellar hook-associated protein 3 [Clostridium tetani E88]
gi|28203816|gb|AAO36256.1| flagellar hook-associated protein 3 [Clostridium tetani E88]
Length = 316
Score = 85.6 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 52/139 (37%), Gaps = 4/139 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I A + + NL+ +Q +++SG + +D+ + A + S+ A
Sbjct: 3 ITNKMLANNFLTDMTTNLNNLQTIQQQLTSGKEIRRPSDDPIKVARAMQLHSEISANQQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
++ I S ++ + + + ++ + + + K I E+ ++ Q+
Sbjct: 63 NENIKDTLSWLEQTDTALGQLGEQSQRVRELLVSAGNAAYGSDERKKINDEVKEIVGQMS 122
Query: 121 DIARGSSFNGENWLRTDLG 139
+SF+G G
Sbjct: 123 QT-LNASFDGRYIFGGTRG 140
Score = 45.5 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ +D + ++G+ +R+ + K +++ + + D D+A +S +
Sbjct: 232 LEALDAVMDNTLKLRSQVGAKGNRMESALEKNKEENFNLKEILSKTEDIDLAEKSMEFA- 290
Query: 425 LQTQQQLAVQALSIVNNSTARILS 448
+A+ ++AR+L
Sbjct: 291 ------VAISVYMSALQTSARVLQ 308
>gi|163939567|ref|YP_001644451.1| flagellin domain-containing protein [Bacillus weihenstephanensis
KBAB4]
gi|163861764|gb|ABY42823.1| flagellin domain protein [Bacillus weihenstephanensis KBAB4]
Length = 145
Score = 85.6 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 49/144 (34%)
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
+ N ++S + ++ + T + ++ +
Sbjct: 1 MRIGTNVLSMNASQSLYENEKRMKMATDKKLNTASDTPANVAIVTRMHARASGIQVAIRK 60
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
I+ ++ + +G++ R+ + + A+ R+ DADMA E + +
Sbjct: 61 IEEALQNISLYRADLGAMMKRLQFNIENLNNQSLALTGASSRIEDADMAQEMSDFFKFKL 120
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
++A+ +S N + L +
Sbjct: 121 LTEVALSMVSQANQIPQMVSKLLQ 144
Score = 49.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 37/96 (38%), Gaps = 5/96 (5%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +M+ASQ L + + ++++ +++ A+D A +I M + +
Sbjct: 3 IGTNVLSMNASQSLYENEKRM-----KMATDKKLNTASDTPANVAIVTRMHARASGIQVA 57
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV 99
I + + +A + + + +
Sbjct: 58 IRKIEEALQNISLYRADLGAMMKRLQFNIENLNNQS 93
>gi|162532595|gb|ABY16697.1| FlaA [Arcobacter butzleri]
Length = 302
Score = 85.6 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + N ++ +++S+GLRV+ AAD+A+ +IA +++ +++
Sbjct: 3 INTNVSSLTAQEAASNTNKSITNSLEKLSTGLRVNKAADDASGLAIADKLRTQATSINQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ + I M++ ++ TIK K+ T +I +IT+L QL
Sbjct: 63 IANGNSAVALLQITDKSMAEQSSILDTIKAKLIQANTDTTSVAGRTAIAKDITKLLQQLN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTAS 144
+I +++NG N L+ ++ AS
Sbjct: 123 NIGEQTNYNGTNLLQNARTTADAS 146
Score = 75.2 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 36/111 (32%), Gaps = 5/111 (4%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
++ A T + + ID I G IGS ++I +
Sbjct: 197 GAKMSAGATAGTTGVFTRTMAQSGQKAIDKAITTLNGYRGDIGSTQNQIESAIRNLS--- 253
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + D D A ES + L Q A+S N +L L +
Sbjct: 254 --IKNAESVIRDVDYAQESANFNKLNIISQAGSYAISQANAVQQNVLKLLQ 302
>gi|89214318|gb|ABD64471.1| flagellin [Bacillus thuringiensis serovar andalousiensis]
Length = 206
Score = 85.6 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAAIQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + + T
Sbjct: 61 QRMRDLTVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDDENRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNMIKHIPPSPTQHDIKIST 144
Score = 62.1 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/203 (10%), Positives = 57/203 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAAIQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLTVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDDENRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNMIKHIPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGAMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMAS 417
+ A+ R+ DADMA
Sbjct: 182 NLNGQSMALTDAASRIEDADMAQ 204
>gi|169826734|ref|YP_001696892.1| flagellar hook-associated protein 3 [Lysinibacillus sphaericus
C3-41]
gi|168991222|gb|ACA38762.1| Flagellar hook-associated protein 3 (HAP3) [Lysinibacillus
sphaericus C3-41]
Length = 300
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/218 (13%), Positives = 70/218 (32%), Gaps = 3/218 (1%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
+ + + L + +QD+++SG +++ +D+ + D + +
Sbjct: 9 SSNMLRNLNISYGKMSKLQDQINSGSKITRPSDDPVIAVKGMGYRRDLAKVEQYTRNTIT 68
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGS 126
SS +D +++ + M ++ + D I+ EI Q++ QL+D+ +
Sbjct: 69 ASSWLDSTDESLNQVGEQMKRVRELVIQAATDSNTSEDRDKIKKEIDQIRQQLQDVGNTN 128
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
+ T + ++ P L ++ D +
Sbjct: 129 IGGSYIFSGTRTNEPLFIGGAINPNTNQESVKVEIYDGIQLSVNTPGKDLFNNIDDMMGK 188
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
L + E VS + I+ K+
Sbjct: 189 ISDLLGDPTKTGEEIASMLGGVSSSTTNDDITAMHNKV 226
Score = 45.5 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 22/228 (9%), Positives = 53/228 (23%)
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
V Y + ++ S + + A
Sbjct: 59 VEQYTRNTITASSWLDSTDESLNQVGEQMKRVRELVIQAATDSNTSEDRDKIKKEIDQIR 118
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
+ V + S +P +V + + D
Sbjct: 119 QQLQDVGNTNIGGSYIFSGTRTNEPLFIGGAINPNTNQESVKVEIYDGIQLSVNTPGKDL 178
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
++ + ++ + ++ I A IG+ +
Sbjct: 179 FNNIDDMMGKISDLLGDPTKTGEEIASMLGGVSSSTTNDDITAMHNKVLEAQADIGARQN 238
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
R+ + E+ + + V K + D A T + ++ Q A+
Sbjct: 239 RVEMMENRLGVREVNVTKQLRDNESVDYAKAITEMVTHESIHQAALSV 286
>gi|162532610|gb|ABY16709.1| FlaB [Arcobacter butzleri]
Length = 307
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + N N+ +++S+GLR++ AAD+A+ +IA +++ +++
Sbjct: 3 INTNVSSLTAQEAAVNTNKNISTSLEKLSTGLRINKAADDASGLAIADKLRTQATSINQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ + I M++ ++ TIK+K+ T +I +IT+L QL
Sbjct: 63 ISNGNSAVALLQITDKSMAEQSTILDTIKSKLIQANTDTTSVAGRTAIAKDITKLLQQLN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
+I +++NG N L+ ++ AS
Sbjct: 123 NIGEQTNYNGTNLLQNARTTANAST 147
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 39/111 (35%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
++ A T + + IDT I G IGS ++I +
Sbjct: 197 GAKMSAGATAGTTGVFTRTMAQSGQKAIDTAITTLNGYRGDIGSTQNQIESAIRNLSTQA 256
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + D D A ES + L Q A+S N++ +L L +
Sbjct: 257 TNIKNAESTIRDVDYAQESANYNKLNIIAQAGSYAISQANSTQQNVLRLLQ 307
>gi|124268247|ref|YP_001022251.1| flagellin-related hook-associated protein [Methylibium
petroleiphilum PM1]
gi|124261022|gb|ABM96016.1| flagellin-related hook-associated protein [Methylibium
petroleiphilum PM1]
Length = 398
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/451 (10%), Positives = 118/451 (26%), Gaps = 62/451 (13%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T+ + + L+ L Q+++SS RV+ A+D+ + A+ + +A
Sbjct: 3 VSTSSTYDATIANLQRRAQELSRSQEQMSSLKRVNRASDDPTAAARAERALAVEARSAAT 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
AI + V ++ + A+ ++ ++ + + + ++ + Q++++L
Sbjct: 63 QRAIDASMNAVSQTESTLGDALGLLQQARDSVVSAGNASFSDAERANLAISLRQMRAELL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA G S+ + F +T
Sbjct: 123 TIANSPDGAGSYLFAGQGASNPPFVDTPTGVQFRGVSGETGAPSTEP------------- 169
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + +++ + T + +
Sbjct: 170 ---------------LPLTMDGRSTWLQASSGNGVFVTSATQQAGTGWINTGSVIDPSAA 214
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ G + + S I +
Sbjct: 215 TGDPYSLSFTVAGGVTTYTVLRDGNPTALTDVPYQSGQAIEIDGLS-------------- 260
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T ++ D + +
Sbjct: 261 ------------FTVTGAPADADRFDITPSSASLSIFDVLDRVATELETPGRNNGQIAQS 308
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + ID TA G +RI + + + A + + D DM +
Sbjct: 309 VATALRDIDASSAKLTAQRAVAGETLNRIDRAAERLSGQKLAAQTDRSQAEDLDMVEAIS 368
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
QT + A+++ + S LSLF+
Sbjct: 369 TFQKQQTGYEAALKSYA----SVQN-LSLFQ 394
>gi|13472583|ref|NP_104150.1| flagellin(flaA) [Mesorhizobium loti MAFF303099]
gi|14023329|dbj|BAB49936.1| flagellin; FlaA [Mesorhizobium loti MAFF303099]
Length = 328
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 69/160 (43%), Positives = 94/160 (58%), Gaps = 1/160 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI+TN +A++A Q L NL Q R+S+G RVS A+DNAAYWSIA M+SDN A+
Sbjct: 1 MASIMTNSAALTALQSLNATQNNLSTTQARISTGYRVSQASDNAAYWSIATTMRSDNQAM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT-AGVERGTDSKSIQSEITQLQSQL 119
S VSD++GLG+SKVD A GM+ AI ++ I+ K+T + + + Q EI LQ QL
Sbjct: 61 STVSDSLGLGASKVDTAYTGMNSAITTINAIQQKLTGSYGQTDAAKEKTQVEIAALQQQL 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
+ A ++F+G N L S TA+ K V
Sbjct: 121 KGYADSATFSGTNMLSVSTASGTAADVKIVSAFNRSSTGS 160
Score = 64.4 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 62/291 (21%), Positives = 106/291 (36%)
Query: 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKK 221
+ + + S KV+ +
Sbjct: 38 SQASDNAAYWSIATTMRSDNQAMSTVSDSLGLGASKVDTAYTGMNSAITTINAIQQKLTG 97
Query: 222 FKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR 281
T + Q + + + ++ + + + ++
Sbjct: 98 SYGQTDAAKEKTQVEIAALQQQLKGYADSATFSGTNMLSVSTASGTAADVKIVSAFNRSS 157
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
G+ + SI T + +T T + T ++ +
Sbjct: 158 TGSVSLSTIDVNVESIKLYDSGAAPTAKGLLDTARLGTTGAATTTAQAPTLGAAPAAGDT 217
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
++ + + +M++ +D +K T AA K+G+ S I LQ+ F + + D
Sbjct: 218 YSVASLAIFSGTTAASDAQISQMMTVVDAALKDMTTAATKLGAAKSSIDLQKTFTQSLMD 277
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
++++GVG+LVDADM ESTRL ALQ QQQL VQALSI N S+ ILSLFRG
Sbjct: 278 SIDRGVGQLVDADMNKESTRLQALQVQQQLGVQALSIANGSSQSILSLFRG 328
>gi|295689338|ref|YP_003593031.1| flagellin domain-containing protein [Caulobacter segnis ATCC 21756]
gi|295431241|gb|ADG10413.1| flagellin domain protein [Caulobacter segnis ATCC 21756]
Length = 275
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 82/206 (39%), Gaps = 3/206 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN A+ A Q L N L+V Q R+++G ++S + DN A W+++++ S +L+A
Sbjct: 5 SINTNAGALIALQNLNSTNSELQVTQQRINTGKKISSSKDNGAIWAMSKVQSSTAQSLNA 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQ---SEITQLQSQL 119
V D++ G S +D+A A D++ +K K A + ++ S ++ L+ Q+
Sbjct: 65 VKDSLQRGQSTIDVALAAGDTITDLLGKMKEKALAASDTSLNTASFNALKADFESLRKQI 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
A S FNG + + + T G + + +
Sbjct: 125 TKAADNSLFNGASLATGSVANMTFLANSDGTGFTVSAQTLSLGGLALTTAAAAAFTTATE 184
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKD 205
+ + K+
Sbjct: 185 AKAMIAKVDNAIGTATNKLAALGTNS 210
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/88 (48%), Positives = 60/88 (68%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
M++ +D I AT +G+ S+ + FI ++D+++ GVG LVDAD+A ES +L
Sbjct: 188 MIAKVDNAIGTATNKLAALGTNSTGLDTHLTFIGKLQDSLDTGVGNLVDADLAKESAKLQ 247
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
+LQT+QQL VQALSI N ST+ ILSLFR
Sbjct: 248 SLQTKQQLGVQALSIANQSTSSILSLFR 275
>gi|89214286|gb|ABD64455.1| flagellin [Bacillus thuringiensis serovar dakota]
Length = 219
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANIAIVTRMHARANGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QHMRDLAIQSANSTNSNKNRDSLNKEFQSLTEQISYIGETTEFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVHISKSIPPSPTQHDIKIST 144
Score = 68.2 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 65/218 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANIAIVTRMHARANGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 HMRDLAIQSANSTNSNKNRDSLNKEFQSLTEQISYIGETTEFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + ++ + + + + + I+ ++ + +G++ +R+H +
Sbjct: 122 GHTVHISKSIPPSPTQHDIKISTEQEARAAILKIEEALQSVSLHRADLGAMINRLHFNTE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|297583319|ref|YP_003699099.1| flagellin domain-containing protein [Bacillus selenitireducens
MLS10]
gi|297141776|gb|ADH98533.1| flagellin domain protein [Bacillus selenitireducens MLS10]
Length = 270
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 8/160 (5%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ + +L + ++SSG R+ A +AA SI++ M+S
Sbjct: 1 MVSVNSGVM-----MNHNQTQRSLALTMMQLSSGDRIFRAGQDAAGLSISEGMRSQIRGD 55
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
S + S +A+ +S+ + ++ +D ++Q E QL+
Sbjct: 56 SMAIRNMADSQSLNRVAEGALSQTQSSLHRMRELAVQANNGMLTESDRGALQQEFNQLRE 115
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157
+ + + FN + L + + + D
Sbjct: 116 HIDFVGENTEFNTQRLLDGSFTNRQTTTNANGESVSFDID 155
Score = 56.3 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 40/92 (43%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ +S ID + +++ G IG+ +R+ + + +++ + DADMA
Sbjct: 179 NPGQALSVIDDALGQISSSRGNIGAFDNRLSYAGNVAQNQLLNMQRSESGIRDADMALNI 238
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + T Q ++ A S+ L L R
Sbjct: 239 MDMNRMTTMLQASMSAQSMQMGMMGMHLDLLR 270
>gi|228958039|ref|ZP_04119775.1| Flagellin [Bacillus thuringiensis serovar pakistani str. T13001]
gi|228801664|gb|EEM48545.1| Flagellin [Bacillus thuringiensis serovar pakistani str. T13001]
Length = 87
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 36/87 (41%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ IDT I+ A GS +R+ + + + ++ DADMA E + ++
Sbjct: 1 MEKIDTAIQAVADARATFGSQLNRLDHNLNNVTSQATNMASAASQIEDADMAKEMSEMTK 60
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
+ + + LS N + + L +
Sbjct: 61 FKILNEAGISMLSQANQTPQMVSKLLQ 87
>gi|89214224|gb|ABD64424.1| flagellin [Bacillus thuringiensis serovar shandongiensis]
Length = 219
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 42/109 (38%), Gaps = 3/109 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+D+ A +I M + + S + A+A + +++
Sbjct: 1 EHLTTGKKLNNASDHPANVAIVTRMHARANGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAGV---ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+++ + S+ E L Q+ I + FN
Sbjct: 61 QRMRDLALQSANGINSNKNRDSLHKEFQSLTEQIGYIGETTEFNDLPVF 109
Score = 74.8 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 60/218 (27%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ A + +A G+ A + T + + +
Sbjct: 2 HLTTGKKLNNASDHPANVAIVTRMHARANGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ I + T T + L
Sbjct: 62 RMRDLALQSANGINSNKNRDSLHKEFQSLTEQIGYIGETTEFNDLPVFGDQKRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNLTKHIPPSPTQHDIKISTEQEARVAIRKIEEALQNVSLHRADLGAMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDASSRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|16125047|ref|NP_419611.1| flagellin FljO [Caulobacter crescentus CB15]
gi|221233773|ref|YP_002516209.1| flagellin [Caulobacter crescentus NA1000]
gi|10720395|sp|O52531|FLJO_CAUCR RecName: Full=Flagellin fljO
gi|6996997|gb|AAB95382.2| FljO flagellin [Caulobacter crescentus CB15]
gi|13422037|gb|AAK22779.1| flagellin FljO [Caulobacter crescentus CB15]
gi|220962945|gb|ACL94301.1| flagellin [Caulobacter crescentus NA1000]
Length = 273
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 3/156 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN A+ A Q L + L VQ R+S+G ++ A DN A W+ A+ + +++A
Sbjct: 5 SINTNSGALIALQNLNTTSSELNNVQQRISTGKKIGSAKDNGAIWATAKNQSATANSINA 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQ---SEITQLQSQL 119
V D++ G S +D+A A D++ +K K A + + S ++ L+ Q+
Sbjct: 65 VKDSLQRGQSTIDVALAAGDTITDLLGKMKEKALAASDTSLSTASFNALKADFDSLRDQV 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR 155
A + FNG + + +
Sbjct: 125 TKAATNAKFNGVSIADGTTTKLSFLANSDGSAFTVT 160
Score = 66.7 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 47/138 (34%), Positives = 72/138 (52%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T + +TL T ++ A + M+ IDT ++
Sbjct: 136 VSIADGTTTKLSFLANSDGSAFTVTAKTLTLGGLGLTTTSSFTTAAAAKTMIGTIDTALQ 195
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
AT +G+ S+ + F+ ++D+++ GVG L+DAD+A ES RL +LQT+QQL V
Sbjct: 196 TATNKLASLGTSSTGLDTHLTFVGKLQDSLDAGVGNLMDADLAKESARLQSLQTKQQLGV 255
Query: 434 QALSIVNNSTARILSLFR 451
QALSI N+S++ ILSLFR
Sbjct: 256 QALSIANSSSSAILSLFR 273
>gi|329850845|ref|ZP_08265690.1| flagellin fljJ [Asticcacaulis biprosthecum C19]
gi|328841160|gb|EGF90731.1| flagellin fljJ [Asticcacaulis biprosthecum C19]
Length = 277
Score = 85.6 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 3/177 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN SAM A Q L N N++ VQ R+S+GL VS A DN+A +SIAQ ++D L+
Sbjct: 3 ASVHTNTSAMIALQNLNATNRNMDEVQKRISTGLDVSTAKDNSAVYSIAQSQRADLSGLN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQSQ 118
AV D++ +S D++ A D+M+ ++ K+ AG++ ++ S+ + Q
Sbjct: 63 AVRDSLNRANSIADVSMAAGESISDMMNQLREKVVAGMDSSIDTASRNALNSDYQAIVKQ 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
++ I+ ++FNG N + + IA + + I + L +
Sbjct: 123 IKQISDNATFNGSNLFDGSIPNPIQFIANADADATITLSVKDLTFGGTIITLASDAN 179
Score = 70.2 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 50/207 (24%), Positives = 77/207 (37%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A + A + + ++ + +
Sbjct: 71 ANSIADVSMAAGESISDMMNQLREKVVAGMDSSIDTASRNALNSDYQAIVKQIKQISDNA 130
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + ++ D + I A+ ++
Sbjct: 131 TFNGSNLFDGSIPNPIQFIANADADATITLSVKDLTFGGTIITLASDANILTAATATALL 190
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
S +DT I AA G++GS + +I FI + DA+ G+G LVDADMA ES+RL AL
Sbjct: 191 SNLDTSISNVNAALGELGSQARQIEGHLSFIAKLDDAISSGIGNLVDADMAKESSRLQAL 250
Query: 426 QTQQQLAVQALSIVNNSTARILSLFRG 452
Q QQQL Q+LSI N +ILSLF+G
Sbjct: 251 QVQQQLGTQSLSIANQGPQQILSLFQG 277
>gi|162532611|gb|ABY16710.1| FlaA [Arcobacter butzleri]
Length = 307
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + N ++ +++S+GLR++ AAD+A+ +IA +++ +++
Sbjct: 3 INTNVSSLTAQEAASNTNKSITNSLEKLSTGLRINKAADDASGLAIADKLRTQATSINQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ + I M++ ++ TIK K+ T +I +IT+L QL
Sbjct: 63 IANGNSAVALLQITDKSMAEQSSILDTIKAKLIQANTDTTSVAGRTAIAKDITKLLQQLN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTAS 144
+I +++NG N L+ ++ AS
Sbjct: 123 NIGEQTNYNGTNLLQNARTTADAS 146
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 36/111 (32%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
++ A T + + ID I G IGS ++I +
Sbjct: 197 GAKMSAGATAGTTGVFTRTMAQSGQKAIDKAITTLNGYRGDIGSTQNQIESAIRNLSTQA 256
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + D D A ES + L Q A+S N +L L +
Sbjct: 257 TNIKNAESVIRDVDYAQESANFNKLNIISQAGSYAISQANAVQQNVLKLLQ 307
>gi|315127346|ref|YP_004069349.1| flagellar hook-associated protein FlgL [Pseudoalteromonas sp.
SM9913]
gi|315015860|gb|ADT69198.1| flagellar hook-associated protein FlgL [Pseudoalteromonas sp.
SM9913]
Length = 419
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/450 (10%), Positives = 115/450 (25%), Gaps = 39/450 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N + K+ + N+ Q+RV++G + ++N A S + + +
Sbjct: 3 LSNNLMYQNNINKILENQQNVAGAQERVTTGQKYLSTSENPAAISQGMLYTNKIETNEQL 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLR 120
+ I +++ ++ + D + + D S+ SE+ +LQ L
Sbjct: 63 TKNINQLKGRLETEESLLQGMNDTILEAQMLTIRAGNGSLDKGDLASVASELKELQKSLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++ S G+ S G + + TI ++ ++ +
Sbjct: 123 NLMNSQSEGGKYLFSGYQDDIQTYTFNSTNGKYEYQGDQGQHEVTIAKGVEIKSSDNGFN 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
L ++ I+ + +
Sbjct: 183 VFERVDARLDVVSNGGAPSGG---------------ITAGTVYVQNQGEFDRFHKDNYNS 227
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + P T + + +
Sbjct: 228 DPDPLISPTINTYNVNVIPGATPSSPDQYEILRDGNPLVPPVTGEVTDEPIEFAGMEIQL 287
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G + + +T D L E + A
Sbjct: 288 EGVAPGQLDFTLEKPSKENVLNTLEDLIISLNDEQLDEAQINQ----------------A 331
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + + + + +G + + D + ++ L++ D A +
Sbjct: 332 LSDGLIQLKNASEQIVFTQAGLGGRMNVVERVTDSNSALDINNQENRSSLIEIDAAEAIS 391
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
L+ ++ Q S LSLF
Sbjct: 392 DLTKHESGLQA-----SQATFGRLAKLSLF 416
>gi|309390122|gb|ADO78002.1| flagellar hook-associated protein 3 [Halanaerobium praevalens DSM
2228]
Length = 297
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 22/202 (10%), Positives = 68/202 (33%), Gaps = 4/202 (1%)
Query: 6 TN-HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN + L++ +L + +++SSG +D S + KS S
Sbjct: 4 TNSMMVQNMLDHLKNNMGDLNDLNEQLSSGKLFQTPSDAPIKVSESMNYKSQLNRNSQFQ 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRD 121
+ + ++ ++ + V+ + D K + E+ +L+ +L D
Sbjct: 64 RNLNQAENWLNTTESALKSGTKVIQRARELTIKTANDSLTSGDRKMVAKEMKELRDELID 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I+ + + + + + I ++++ + ++ + L+
Sbjct: 124 ISNAKLGDSYIFSGQKTDAKPFEVVDNGIDNYVKYNGDTSKVARRLNENVEMDINLNGHE 183
Query: 182 DGTERYGLLDRNHKIKVEPQVL 203
+ +++ + + +
Sbjct: 184 VFKDEIESINKIYNQLEDESIS 205
Score = 43.6 bits (100), Expect = 0.075, Method: Composition-based stats.
Identities = 27/248 (10%), Positives = 70/248 (28%)
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ IKV + ++ + T+ + LK+ +A+ +
Sbjct: 36 FQTPSDAPIKVSESMNYKSQLNRNSQFQRNLNQAENWLNTTESALKSGTKVIQRARELTI 95
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
+ + + + + T ++
Sbjct: 96 KTANDSLTSGDRKMVAKEMKELRDELIDISNAKLGDSYIFSGQKTDAKPFEVVDNGIDNY 155
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
V G+T + ++ +L + ++N + D + +S
Sbjct: 156 VKYNGDTSKVARRLNENVEMDINLNGHEVFKDEIESINKIYNQLEDESISGEDIGNNLSE 215
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+D I ++G R D ++ ++ + DAD+A T L +T
Sbjct: 216 MDDSINKYAELRAEVGGKLQRTGNVIDRLEANEIHIKSLKSKNEDADLAEVITNLKMEET 275
Query: 428 QQQLAVQA 435
+ ++ +
Sbjct: 276 VYRASLAS 283
>gi|89214192|gb|ABD64408.1| flagellin [Bacillus thuringiensis serovar toguchini]
Length = 219
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 43/113 (38%), Gaps = 3/113 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I + + + S + A+A + ++++
Sbjct: 1 EHLATGKKLNHASDNPANIAIVTRIHARASGIRVAIRNNEDAISMLRTAEAALQTVMNIL 60
Query: 89 STIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+++ + S+ E L Q+ I + FN +
Sbjct: 61 QRMRDLAVQSANDTNSNKNRGSLNKEFQSLTEQIGYIDETTEFNDLSVFDGQN 113
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A GI A + T + +
Sbjct: 2 HLATGKKLNHASDNPANIAIVTRIHARASGIRVAIRNNEDAISMLRTAEAALQTVMNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+D + T T + + + L
Sbjct: 62 RMRDLAVQSANDTNSNKNRGSLNKEFQSLTEQIGYIDETTEFNDLSVFDGQNRPVILDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNITKHIPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGAMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|89214314|gb|ABD64469.1| flagellin [Bacillus thuringiensis serovar monterrey]
Length = 219
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 47/144 (32%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I + + + S + A+A + ++++
Sbjct: 1 EHLATGKKLNNASDNPANIAIVTRIHARASGMRVTIRNNEDAISMLRTAEAALQTVMNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHKVNMTKPIPPSPTQHDIKIST 144
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 60/218 (27%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + +
Sbjct: 2 HLATGKKLNNASDNPANIAIVTRIHARASGMRVTIRNNEDAISMLRTAEAALQTVMNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHKVNMTKPIPPSPTQHDIKISTEQEARAAILKIEEALQNVSLHRANLGAMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|16125046|ref|NP_419610.1| flagellin FljN [Caulobacter crescentus CB15]
gi|221233772|ref|YP_002516208.1| flagellin [Caulobacter crescentus NA1000]
gi|13637730|sp|O52530|FLJN_CAUCR RecName: Full=Flagellin fljN
gi|13422036|gb|AAK22778.1| flagellin FljN [Caulobacter crescentus CB15]
gi|220962944|gb|ACL94300.1| flagellin [Caulobacter crescentus NA1000]
Length = 273
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 3/156 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN A+ A Q L N L VQ R+++G ++ A DN A W+ A+ + +++A
Sbjct: 5 SINTNSGALIALQNLNSTNAELTQVQQRINTGKKIGSAKDNGAIWATAKNQSATANSMNA 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQL 119
V D++ G S +D+A A D++ +K K A + ++ S + + L+ Q+
Sbjct: 65 VKDSLQRGQSTIDVALAAGDTITDLLGKMKEKALAASDTSLNTASFNALKSDFDSLRDQI 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR 155
A + FNG + T G +
Sbjct: 125 TKAASNAKFNGVSIANGSTAKLTFLANSDGSGFTVT 160
Score = 66.3 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 71/138 (51%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + +TL + + A + M+ IDT ++
Sbjct: 136 VSIANGSTAKLTFLANSDGSGFTVTAKTLTLTGLGLTASSTFTTAAAAKTMIGTIDTALQ 195
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
AT +G+ S+ + F+ ++D+++ GVG LVDAD+A ES +L +LQT+QQL V
Sbjct: 196 TATNKLASLGTSSTGLDTHLTFVGKLQDSLDAGVGNLVDADLAKESAKLQSLQTKQQLGV 255
Query: 434 QALSIVNNSTARILSLFR 451
QALSI N+S++ ILSLFR
Sbjct: 256 QALSIANSSSSAILSLFR 273
>gi|254478850|ref|ZP_05092215.1| flagellar hook-associated protein 3 [Carboxydibrachium pacificum
DSM 12653]
gi|214035212|gb|EEB75921.1| flagellar hook-associated protein 3 [Carboxydibrachium pacificum
DSM 12653]
Length = 296
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 19/178 (10%), Positives = 57/178 (32%), Gaps = 4/178 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N + + L+ Q+ +SSG + + +D+ + + +K+D A
Sbjct: 3 VTHNMMISTFLTDYYNNLERLQKGQNMLSSGKKFTRPSDDPVAVATSLRIKTDMARNDAY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ S ++I + +++ D++ + G QS++ ++ ++ I
Sbjct: 63 TKNADDAKSWLEITDSALAQLGDLLQRTRELAVEGANGTLT----QSDMEKIAQEIMQIK 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ G + + +G + + ++
Sbjct: 119 QQMVQVGNTQYNGRYIFAGFRTDSAPFSETDNGYSGDDNFIEFEIGPGGNKMAVNVPG 176
Score = 54.0 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
A+ M++ ID Q++ + ++G+ S+RI L ++ ++ + + DADMA
Sbjct: 204 NHQAVSGMIANIDNQLENVLSVRAEVGAKSNRIDLIQNRLQNDNYNFTALLSKNEDADMA 263
Query: 417 SESTRL 422
T L
Sbjct: 264 QVITNL 269
>gi|9843803|emb|CAC03720.1| flagellin [Pseudomonas citronellolis]
Length = 316
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 19/225 (8%), Positives = 63/225 (28%)
Query: 199 EPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAA 258
L+ + G + ++ + + Q ++
Sbjct: 73 TDPYLRHHHLRWRQHRGDPAQRQRRHQWHHDLPGRRQRQRNRQLHPERHERPGAEGTYSS 132
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
+ T S + + ++ + S T + S + + V
Sbjct: 133 ASGTVDISSKLDATTSGASAAGSLNLSVDGKAYTVDYDKGATVNDIVSALNSNISGITAV 192
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
S ++ + + + + + ++ + ID +K
Sbjct: 193 ADSSGSITLTSSKALGGSDVTGAAMTSGSLNIQSLDIKSADSAQKAIQVIDGALKQIDTQ 252
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+G++ +R+ ++ + + + D+D A+E+ ++
Sbjct: 253 RSVLGAVQNRLDRTISNLQNIAENATSARSTIQDSDFAAETAVMT 297
>gi|315500091|ref|YP_004088894.1| flagellin domain protein [Asticcacaulis excentricus CB 48]
gi|315418103|gb|ADU14743.1| flagellin domain protein [Asticcacaulis excentricus CB 48]
Length = 272
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN AM A Q L N +L+ Q R+++G +V+ A DN A ++IAQ ++ +L+A
Sbjct: 5 SVNTNSGAMIALQNLNKTNADLQTTQTRINTGQKVASAKDNGAVFAIAQGQRAQVSSLNA 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
V +++ S VD+A + D++S +K K A + ++ + ++ Q+
Sbjct: 65 VQESLSRNQSVVDVAISAGESVSDMLSQLKEKALAASDSSLSTASRTALNEDFKAIRDQI 124
Query: 120 RDIARGSSFNGENWLRTDLG 139
++FNG N +++
Sbjct: 125 GKTVNNATFNGINIIKSGGS 144
Score = 74.8 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/80 (51%), Positives = 55/80 (68%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I +A K+G+ S + +FI + D++E G+G LVDAD+A ES +L ALQT+QQL
Sbjct: 193 IDDVSAKLAKLGTSSKSLANHANFISKLSDSIENGIGNLVDADLAKESAKLQALQTKQQL 252
Query: 432 AVQALSIVNNSTARILSLFR 451
VQALSI N ST+ +LSLFR
Sbjct: 253 GVQALSIANQSTSTVLSLFR 272
>gi|89214304|gb|ABD64464.1| flagellin [Bacillus thuringiensis serovar ostriniae]
Length = 219
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 44/144 (30%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANIVIVTRMYARASGMRLAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSSNGTNSNANRDSLNKEFQSLTEQIGYIGETTEFNDLSVFGGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IGHTINMTKHIPPSPAQHDIKIST 144
Score = 70.2 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 65/218 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANIVIVTRMYARASGMRLAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++ A + T T + + + L
Sbjct: 62 RMRDLAVQSSNGTNSNANRDSLNKEFQSLTEQIGYIGETTEFNDLSVFGGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTINMTKHIPPSPAQHDIKISTEQEARAAIHKIEEALQNVSLHRADLGAMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|167646849|ref|YP_001684512.1| flagellin domain-containing protein [Caulobacter sp. K31]
gi|167349279|gb|ABZ72014.1| flagellin domain protein [Caulobacter sp. K31]
Length = 272
Score = 85.2 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN AM A Q L N L+ Q R+++G ++S+A DN A WS+A++ + + +L+A
Sbjct: 4 SINTNAGAMIALQNLNSTNAELQSTQQRINTGKKISNAKDNGAIWSMAKMQSATSSSLNA 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQL 119
V D++ G S +D+ A D++ +K K A + ++ S + + T L+ Q+
Sbjct: 64 VKDSLQRGQSTIDVGLAAGDTITDLLGKMKEKALAASDTSLNTASFNALVSDFTSLRDQI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTA 143
+ FNG + +
Sbjct: 124 TKAVTNAKFNGVSLVDGTTTKLQF 147
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/72 (47%), Positives = 50/72 (69%)
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G+ S+ + + F ++D+++ GVG LVDAD+A ES +L +LQT+QQL VQALSI
Sbjct: 201 ANLGTSSTGLDMHLTFTGKLQDSLDAGVGNLVDADLAKESAKLQSLQTKQQLGVQALSIA 260
Query: 440 NNSTARILSLFR 451
N + ILSLF+
Sbjct: 261 NQTPQSILSLFK 272
>gi|319787114|ref|YP_004146589.1| flagellar hook-associated protein 3 [Pseudoxanthomonas suwonensis
11-1]
gi|317465626|gb|ADV27358.1| flagellar hook-associated protein 3 [Pseudoxanthomonas suwonensis
11-1]
Length = 400
Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/439 (11%), Positives = 107/439 (24%), Gaps = 57/439 (12%)
Query: 1 MTS-ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M++ I T+ + + L +Q ++++G + A D+ A +
Sbjct: 1 MSNRISTSMMYDQSLATMLSRQKQLASLQQQIATGRKTVTAKDDPVGAGAAVGLDRSLAE 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQ 116
L ++++ + + ++ A D M I D +SI +E+ L+
Sbjct: 61 LERFGLNANNINNRLGMQENVLALAGDDMIRINELAVQANSDTLSDDDRRSIAAELRSLR 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
L +A S G + ++ D ++ ++
Sbjct: 121 EHLVSLANSSDGTGRYLFAGAADDVAPFGRVAGGIAYNGDQTQRMVEIAPGTFVKDTLPG 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+ +
Sbjct: 181 SEVFMRVRT---------------------------------------------GDGTVD 195
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
A D A + I +PA +G + S T ++
Sbjct: 196 ARMDPANTGSMILEGFSRSPAGGWEGAGYRVEFTGDNTYSVTDHAGNPIASGTWTAKQDI 255
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ S G+ + + + + ++ + N
Sbjct: 256 EFAGLRVRISGTPAEGDALEIGPAGTRDIFATVEALASALESPTVTIADNAARRNALQAG 315
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ ID A G+ + I + ++ + + D D A
Sbjct: 316 MRDVARAAEQLID--------ARALGGAQLALIDDAGALREANSVTLKTTLSAMRDLDYA 367
Query: 417 SESTRLSALQTQQQLAVQA 435
TR T Q A
Sbjct: 368 DAITRFQLESTALQTAQTV 386
>gi|157062959|gb|ABV04073.1| flagellin B [Arcobacter butzleri]
Length = 307
Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + N ++ +++S+GLRV+ AAD+A+ +IA +++ +++
Sbjct: 3 INTNVSSLTAQEAASNTNKSITNSLEKLSTGLRVNKAADDASGLAIADKLRTQATSINQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ + I M++ ++ TIK K+ T +I +IT+L QL
Sbjct: 63 IANGNSAVALLQITDKSMAEQSSILDTIKAKLIQANTDTTSVAGRTAIAKDITKLLQQLN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTAS 144
+I +++NG N L+ +S AS
Sbjct: 123 NIGEQTNYNGTNLLQNARTTSDAS 146
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 36/111 (32%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
++ A T + + ID I G IGS ++I +
Sbjct: 197 GAKMSAGATAGTTGVFTRTMAQSGQKAIDKAITTLNGYRGDIGSTQNQIESAIRNLSTQA 256
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + D D A ES + L Q A+S N +L L +
Sbjct: 257 TNIKNAESVIRDVDYAQESANFNKLNIISQAGSYAISQANAVQQNVLKLLQ 307
>gi|152990393|ref|YP_001356115.1| flagellar hook-associated protein 3 FliC [Nitratiruptor sp.
SB155-2]
gi|151422254|dbj|BAF69758.1| flagellar hook-associated protein 3 FliC [Nitratiruptor sp.
SB155-2]
Length = 413
Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/438 (11%), Positives = 107/438 (24%), Gaps = 41/438 (9%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ +E + +SSG +V +D S A +KS + I L S+
Sbjct: 13 LSNITKYQNKIERYSNELSSGKKVFVPSDAPVDNSRALQLKSLAKEIDGYMRNIDLASNS 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
+ IA+ + + + I + G + +RD S
Sbjct: 73 MSIAETSLKNVSEAALDARVDIVQLLNTGVLDSEDANIFKDYLQNVRDYIISQSNVRIGS 132
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
G + ++ G +V + +T+ ++ +
Sbjct: 133 NYLFGGEDSKTVPFDENG-------------FYQGSSVEVSVPVAKATEVVTKFNGENYL 179
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
I+ K + + A I + + +
Sbjct: 180 STIQSGTLNDKKQKIGLVKAIDDIIAIIEDGEIYKLHGKNSELGYLSPNDALISSTETAG 239
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+ S + ++ D + N
Sbjct: 240 TITINYKDVTLNIDYDSDTTDSTNPSTLQELVDA-----------------------INN 276
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + KD + +I D N + ++ D +
Sbjct: 277 APANNGNITAYTFTDKDGIVRLGFAGKETDKDIEVTITGDLQNHLGGFQYILDEFDQGFE 336
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
G IG + ++ + + + D+D A L +T Q +
Sbjct: 337 GVERHRGMIGVQEQLVDNLKEQHENFKVNYNDLASKFEDSDYAEAIVNLEKAKTTYQATL 396
Query: 434 QALSIVNNSTARILSLFR 451
+ + LSL +
Sbjct: 397 ASF-----MQNKELSLLK 409
>gi|307136887|ref|ZP_07496243.1| Lateral flagellin (FliC-like) protein [Escherichia coli H736]
gi|331640751|ref|ZP_08341886.1| bacterial flagellin N-terminus subfamily [Escherichia coli H736]
gi|315616815|gb|EFU97432.1| lateral flagellin [Escherichia coli 3431]
gi|331037549|gb|EGI09769.1| bacterial flagellin N-terminus subfamily [Escherichia coli H736]
Length = 304
Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 93/288 (32%), Gaps = 3/288 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI TN+++M+A + + +L +R+++G R++ +AD+AA IA + + + +
Sbjct: 1 MLSINTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQS 117
I ++ + A + + DV+ +K+ T ++Q E +L
Sbjct: 61 DVALSNINDATAMLQTADSMFDEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ D+ + +++ G N S+T + + T++ T++
Sbjct: 121 QMSDMLQNTTYGGTNLFGVSGTSNTGTDGLFQSAVTFQVGAESSDTMTVNISSQLNTLVT 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
D S + + T + + + L A+
Sbjct: 181 DLSAISNSFSADQADTTGTAGVSGGTELTASGSANQMITSISTAMDDVSQIQSKLGASIN 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
+ T + + S
Sbjct: 241 RLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITM 288
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ + D + A A + S +
Sbjct: 68 NDATAMLQTADSMFDEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQ 127
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ T + + + ++ TL +
Sbjct: 128 NTTYGGTNLFGVSGTSNTGTDGLFQSAVTFQVGAESSDTMTVNISSQLNTLVTDLSAISN 187
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
S T + + +M++ I T + + K+G+ +R++ +
Sbjct: 188 SFSADQADTTGTAGVSGGTELTASGSANQMITSISTAMDDVSQIQSKLGASINRLNDTAN 247
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ M+D E +G ++D D A+E++ ++ Q Q + L N+ ++ + SL +
Sbjct: 248 NLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVSSLLQ 304
>gi|153839998|ref|ZP_01992665.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus
AQ3810]
gi|149746458|gb|EDM57467.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus
AQ3810]
Length = 397
Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/434 (10%), Positives = 109/434 (25%), Gaps = 52/434 (11%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T I + H+ S LR + Q++++SG ++ +D+ Q + L
Sbjct: 3 TRISSFHNYQSVQNDLRRQENKIHHNQEQLASGKKLLKPSDDPLAAHYIQNIGQQQEQLK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
+I L ++++ + ++ A K + ++ Q++ +L+ +
Sbjct: 63 QYLSSIVLVRNRLENHEVNIANAESFADESKRLTMEMINGAFSAEDRQAKKRELEEIANN 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ + E+ G T
Sbjct: 123 LLNLVNAQDESGNYVFAG-----------------------------------------T 141
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ D++ ++ + ++ KL ++D
Sbjct: 142 KPKSQPFYRDKDGSVQYAGDDYQRKMKVSSMLDMPMNDPGSKLFMEIPNPFGDYQPSYDL 201
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
G + A + + + R G + + I
Sbjct: 202 QSGSDLLLSKATNVDAKDTASYRVTFVDMNNGKFGYQLERNGKVVDADEFSPEKGIEYKG 261
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ ++ + S S+ + +
Sbjct: 262 LKVHVKGQITPGDSIGIEKRESFSIFDTFKEAMSWSDKSVSDT-----------SATAKL 310
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+M A +G+ S + +QE + ++ K D D +
Sbjct: 311 HQMTEEFQAAFIHLNKARTDVGARLSTLDIQEQNHEDFNLSLAKAKSNFEDLDYSKAVIE 370
Query: 422 LSALQTQQQLAVQA 435
S Q + QA
Sbjct: 371 FSENSRALQASQQA 384
>gi|251799724|ref|YP_003014455.1| flagellar hook-associated protein 3 [Paenibacillus sp. JDR-2]
gi|247547350|gb|ACT04369.1| flagellar hook-associated protein 3 [Paenibacillus sp. JDR-2]
Length = 319
Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 66/219 (30%), Gaps = 3/219 (1%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
+ + + ++ +Q+++++G ++ +D+ + A + + + +D
Sbjct: 9 MMSSQMLGNITNNLNSMNKLQNQLATGKAINKPSDDPIGITFALRYRGEIASNDQYTDNS 68
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLRDIAR 124
S ++ + +A D++ + I G + S+ Q+E++QL +Q+ +I
Sbjct: 69 DAALSSLEYMDTTIGQATDIVQRFRELIVKGSNGTLEQTSMTAIQTEVSQLYNQMVEIGN 128
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G S S D ++ + L
Sbjct: 129 SQFNGKQMFNGEQTGVKPYSTLGLDQQSDPSADPPILKAFSNQTDTGSIQYELSPGMTMD 188
Query: 185 ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
D + ++
Sbjct: 189 VNMTGNDVFGAPVADESDTTSDNLFQLMHRAYDMLGSGD 227
Score = 51.3 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 41/85 (48%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ ++ + ++ IDT++ A ++G+ +R+ + + + + +++ ++
Sbjct: 221 DMLGSGDQEGLTGLLGQIDTRMNTMLTARAQVGARVNRVEIVQGRLSDVDINLQQMQQKV 280
Query: 411 VDADMASESTRLSALQTQQQLAVQA 435
D DMA T ++ L+ Q ++ A
Sbjct: 281 EDVDMAEAITNITTLENVYQASLSA 305
>gi|121535556|ref|ZP_01667364.1| flagellar hook-associated protein 3 [Thermosinus carboxydivorans
Nor1]
gi|121305884|gb|EAX46818.1| flagellar hook-associated protein 3 [Thermosinus carboxydivorans
Nor1]
Length = 323
Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 37/125 (29%), Gaps = 2/125 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + + L +Q++++ G + +D+ + ++
Sbjct: 3 ITNNIISYNFLNSLNKALERQNEIQEQLADGKAIHRPSDDPIKTIRSLRFNTNLAMNEQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV--ERGTDSKSIQSEITQLQSQLRD 121
+ + S ++ +S ++ K V +I EI L
Sbjct: 63 TQNVKDALSWLETTDGALSDLSSIVIRAKELTIEAVGPNPTEAFAAIAQEINGLIDHAVQ 122
Query: 122 IARGS 126
+A
Sbjct: 123 VANTK 127
>gi|302339107|ref|YP_003804313.1| flagellar hook-associated protein 3 [Spirochaeta smaragdinae DSM
11293]
gi|301636292|gb|ADK81719.1| flagellar hook-associated protein 3 [Spirochaeta smaragdinae DSM
11293]
Length = 414
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 58/437 (13%), Positives = 111/437 (25%), Gaps = 41/437 (9%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M + T LR N + VQ+++ S R+++ D+ + + KS L
Sbjct: 1 MKRVSTYQPNYDMQYYLRRRNNEMSRVQNQIGSQSRITNLRDDPIAAAHSVRYKSAVDRL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQS 117
S + + IA++ + A D++ ++ G + + EI QL
Sbjct: 61 SQFDQNAAMVLDEGRIAESYLKSANDILHQVRELAVKGANDTLNKDDKRMIGGEIDQLLK 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L +IA +G ++ D S
Sbjct: 121 ELVEIANARGPDGTSFFAGDRTMSP---------------------------AYRVIQGS 153
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + +V + +
Sbjct: 154 LDGGRSYGVTNVEYIGTITPPKAEVSSGNYIQAGF-----------SGNNLFWAEQQQLF 202
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ A L S + + + + S V + S
Sbjct: 203 SGRDASSYTLTEDSLVRIDNEYVKLSAGDNIHAIIAKINDSAAAVKASLDPVENSLVLST 262
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
TS V SG S+ + + + +
Sbjct: 263 TSPHQLWLEDVGDGRVLKDLGVIAEIGKAPYNLARGASLSGGSLFDMVMNLRDSLLKGDT 322
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ I +GS R+ L I R + + D D+A
Sbjct: 323 IEIGGSALKGISMAQDNLIETMSGLGSRDERLQLIRQRIAQERPEIVNRDSQETDVDLAE 382
Query: 418 ESTRLSALQTQQQLAVQ 434
T L+AL+ + A+Q
Sbjct: 383 AITDLTALEQSHKAALQ 399
>gi|254420609|ref|ZP_05034333.1| Bacterial flagellin N-terminus domain protein [Brevundimonas sp.
BAL3]
gi|196186786|gb|EDX81762.1| Bacterial flagellin N-terminus domain protein [Brevundimonas sp.
BAL3]
Length = 305
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 53/260 (20%), Positives = 92/260 (35%), Gaps = 3/260 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
TSI TN SAM A Q L + L Q RV++GL+V A DNAA W++AQ ++D G+L
Sbjct: 3 TSIHTNTSAMIALQNLNRTSDQLASTQSRVNTGLKVQGAKDNAAVWAVAQGQRADKGSLE 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQ 118
AV+ ++ +S D++ A + D++ +K K T + S E L
Sbjct: 63 AVTTSLNRATSIADVSLAAGEQISDILLEMKQKATAAADPSQSAATRASYDQEFQALLKS 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
++ A + F+G N L + +A + I + + + +
Sbjct: 123 VQSFADNAIFDGANILDGAATTDMTFLASADGNETIAMKRQNLTLVGLGLAANSYDSNKA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ + + A I ++ A
Sbjct: 183 TAAIDAWTDNAGTPEDETLLNAAPDLLTQEKAKFALQRIDDAITVASSRLSELGAQAKQI 242
Query: 239 FDQAKGIATIPVPLPAAPAA 258
+ + L A
Sbjct: 243 ERHTTYVGKLSDSLEAGIGN 262
Score = 70.2 bits (169), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 67/132 (50%)
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
++ ++ + + + + T + + + ID I A++
Sbjct: 173 AANSYDSNKATAAIDAWTDNAGTPEDETLLNAAPDLLTQEKAKFALQRIDDAITVASSRL 232
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
++G+ + +I ++ + D++E G+G LVDAD+A ES RL ALQ QQQL VQALSI
Sbjct: 233 SELGAQAKQIERHTTYVGKLSDSLEAGIGNLVDADLAKESARLQALQVQQQLGVQALSIA 292
Query: 440 NNSTARILSLFR 451
N + ILSLF+
Sbjct: 293 NQAPQMILSLFK 304
>gi|300854204|ref|YP_003779188.1| flagellin subunit protein B [Clostridium ljungdahlii DSM 13528]
gi|300434319|gb|ADK14086.1| flagellin subunit protein B [Clostridium ljungdahlii DSM 13528]
Length = 282
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 36/92 (39%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ ID+ + + K G+ +R D ++ + + + + D+DMA E
Sbjct: 187 GNDSALNAIDSTLDKILSLRSKYGAFENRFTSSYDNMQELNEKMTDANSSIRDSDMAEEI 246
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
S Q + ++ N +L + +
Sbjct: 247 MNYSKESIVIQASTAMIAQANKLPQDVLQIIQ 278
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/270 (12%), Positives = 82/270 (30%), Gaps = 3/270 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N A+ + +R+SSG +++ AADN ++ + +L V
Sbjct: 3 LNYNMPALIINMIQNQALDRQSGDLNRISSGCKINSAADNPTGLVQSENINIQVKSLETV 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
+ + G S + A+ G+++ ++ I+ D + IQ EI ++ + +
Sbjct: 63 TRNVQDGVSMLQSAEGGLNEITSMVQRIRQLTVQAGDGSNNPGDKQLIQGEIDEMLNGIN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ A+ + FNG L + S + I + ++ L
Sbjct: 123 ETAQNTEFNGFKLLGQNQTISMTIGTNAGDNVNIPQIDLSNGANSVISDLYKIKTGGGKD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
L+ + L+ + + + +L + +
Sbjct: 183 ILSGGNDSALNAIDSTLDKILSLRSKYGAFENRFTSSYDNMQELNEKMTDANSSIRDSDM 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
+ + + + +
Sbjct: 243 AEEIMNYSKESIVIQASTAMIAQANKLPQD 272
>gi|163793267|ref|ZP_02187242.1| flagellin domain protein [alpha proteobacterium BAL199]
gi|159181069|gb|EDP65584.1| flagellin domain protein [alpha proteobacterium BAL199]
Length = 274
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 3/180 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN A A + L +N L+V Q+RVS+GL++S A D+A+ +SIAQ ++ + A+ A
Sbjct: 6 SINTNVGAFVALRNLNQVNKRLDVSQNRVSTGLKISGALDDASNFSIAQGIRGELKAIGA 65
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
V+ + +A AG + D++ T++ K+T ++ + QL SQ
Sbjct: 66 VTQGLNNAKGIGKVAIAGTTAISDLLQTVRQKLTELSNEGITTAQRTILEEDFNQLLSQA 125
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ + FNG N L + + S + + + + + L +
Sbjct: 126 ANFIDNAVFNGVNLLDSSSSNVNTLSNLSGGTLSLTFQDLRTTVLGLAGSSFGSATLAQA 185
Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+A G +G+ + LQ F++ + DA E+G+G +VDAD+A ES +L+A Q QQL+
Sbjct: 196 STVNSALGSLGAEVRALELQTTFLEQISDATEEGLGNIVDADLARESAKLTAAQVSQQLS 255
Query: 433 VQALSIVNNSTARILSLF 450
VQ L I N +L LF
Sbjct: 256 VQTLGIANQRPQSLLGLF 273
>gi|160896072|ref|YP_001561654.1| flagellar hook-associated protein 3 [Delftia acidovorans SPH-1]
gi|160361656|gb|ABX33269.1| flagellar hook-associated protein 3 [Delftia acidovorans SPH-1]
Length = 399
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 57/436 (13%), Positives = 117/436 (26%), Gaps = 52/436 (11%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I T + S L N +L + ++ +SG RV A+D+ + A+ +
Sbjct: 4 SRIGTANMYDSTINNLNSRNTSLVDLMEKTTSGKRVVRASDDPVAAAQAERALTRISRSE 63
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
+GL + ++ + A D + ++ I D K+ + + QL+S
Sbjct: 64 NDQRVLGLQRDVMAQGESKLGTAQDALKDFRDLILQSGNGSYDQKARDALVQQLESLRNQ 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ ++ N L G + Q T + L +
Sbjct: 124 VLSYANAKDSNGLPIFRGLGSKEDPLVNSTPGANSQLQPGQATGSENGLPLALDGFATWM 183
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G+ + + D+ ++ T ++ + + T
Sbjct: 184 NVPTGNGVFAVSRQSPTGSSAYADLGTVSDPSAITGASYTLNFTKDATTGALSYTVTSGG 243
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
G A + + + + A R +
Sbjct: 244 TTGTAVPYTAGDSITVGGMSMKISGNLATGDSFTLAPSQRTDLFSVLDNVIAGVKN---- 299
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
TDA + A+
Sbjct: 300 ------------------------------------------------GATDAGAMQQAL 311
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ +D + A G +R ED +K D E R D DM +
Sbjct: 312 GRGLNELDAGMSRVQAMRSFAGDQLNRADRLEDDMKNQADQQEAARSRAEDIDMIKALSD 371
Query: 422 LSALQTQQQLAVQALS 437
+ + Q A+Q+ +
Sbjct: 372 VDMQKVGMQAALQSYA 387
>gi|170749402|ref|YP_001755662.1| hypothetical protein Mrad2831_2995 [Methylobacterium radiotolerans
JCM 2831]
gi|170655924|gb|ACB24979.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 405
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 61/451 (13%), Positives = 147/451 (32%), Gaps = 46/451 (10%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SI + + L+D + Q+R+++G V+ A DN + +Q + + +L
Sbjct: 1 MSSITLSAATRQNLLSLQDTAQLMATTQNRLATGKTVNSALDNPTNFFTSQALDGRSSSL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+++ D + G + A G++ ++ K+ + + + + +
Sbjct: 61 NSLLDGVSNGIQSIQAANQGITSIQKLVDQAKSIANQALSTQLSTTGTAANAYSASTASQ 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + + S +A++A
Sbjct: 121 TVLLTINGTSVSATVAASSSISATVAA--------------------------------- 147
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
V A ++ + K+ + A ++ N+
Sbjct: 148 -------------LNSAVSSASTASSGSFGAGAIFSVDSTGTKIVLNAQADVEFQNSGSQ 194
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A G A +T + S S ++ + N + ++ +
Sbjct: 195 TALGFTASATTASTYGTAASTVVSSDLSISGVTQRASLANQYNNLLNQITQLAGDASYNG 254
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + + + S + + N + +
Sbjct: 255 VNLIAGKGNDLNIKFNDTGSSTLNVASVDATASGLGLSSITSSNNSSSQNGLGNFLLNSD 314
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + ++ + + T+AA +GS S + ++DF K + + ++ G L +AD+ E+
Sbjct: 315 VNKTLATLTSAGNTLTSAASSLGSNLSVVQNRQDFSKQLINVLQTGSANLTNADLNQEAA 374
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
AL T+Q + + ALS+ N++ +L L R
Sbjct: 375 NSQALSTRQSMGISALSLANSAQQGVLQLLR 405
>gi|170021350|ref|YP_001726304.1| flagellin domain-containing protein [Escherichia coli ATCC 8739]
gi|170683491|ref|YP_001742383.1| lateral flagellar flagellin LafA [Escherichia coli SMS-3-5]
gi|188495105|ref|ZP_03002375.1| flagellin A [Escherichia coli 53638]
gi|256020238|ref|ZP_05434103.1| Lateral flagellin (FliC-like) protein [Shigella sp. D9]
gi|260853476|ref|YP_003227367.1| putative lateral flagellin [Escherichia coli O26:H11 str. 11368]
gi|260866422|ref|YP_003232824.1| putative lateral flagellin [Escherichia coli O111:H- str. 11128]
gi|293403367|ref|ZP_06647458.1| conserved hypothetical protein [Escherichia coli FVEC1412]
gi|293408377|ref|ZP_06652216.1| predicted protein [Escherichia coli B354]
gi|298378979|ref|ZP_06988860.1| flagellin [Escherichia coli FVEC1302]
gi|306813293|ref|ZP_07447486.1| Lateral flagellin (FliC-like) protein [Escherichia coli NC101]
gi|307313509|ref|ZP_07593130.1| flagellin domain protein [Escherichia coli W]
gi|331645428|ref|ZP_08346532.1| flagellin D [Escherichia coli M605]
gi|331666556|ref|ZP_08367430.1| flagellin D [Escherichia coli TA271]
gi|331671814|ref|ZP_08372610.1| flagellin D [Escherichia coli TA280]
gi|332281400|ref|ZP_08393813.1| lateral flagellar flagellin [Shigella sp. D9]
gi|59889792|emb|CAH19148.1| Lateral flagellar flagellin (FliC-like) [Escherichia coli]
gi|169756278|gb|ACA78977.1| flagellin domain protein [Escherichia coli ATCC 8739]
gi|170521209|gb|ACB19387.1| lateral flagellar flagellin LafA [Escherichia coli SMS-3-5]
gi|188490304|gb|EDU65407.1| flagellin A [Escherichia coli 53638]
gi|257752125|dbj|BAI23627.1| predicted lateral flagellin [Escherichia coli O26:H11 str. 11368]
gi|257762778|dbj|BAI34273.1| predicted lateral flagellin [Escherichia coli O111:H- str. 11128]
gi|284920056|emb|CBG33113.1| lateral flagellar flagellin (FliC-like) [Escherichia coli 042]
gi|291429220|gb|EFF02240.1| conserved hypothetical protein [Escherichia coli FVEC1412]
gi|291471555|gb|EFF14038.1| predicted protein [Escherichia coli B354]
gi|298280092|gb|EFI21596.1| flagellin [Escherichia coli FVEC1302]
gi|305854056|gb|EFM54495.1| Lateral flagellin (FliC-like) protein [Escherichia coli NC101]
gi|306906677|gb|EFN37188.1| flagellin domain protein [Escherichia coli W]
gi|315059552|gb|ADT73879.1| Flagellin [Escherichia coli W]
gi|323158093|gb|EFZ44192.1| lateral flagellin [Escherichia coli EPECa14]
gi|323171075|gb|EFZ56724.1| lateral flagellin [Escherichia coli LT-68]
gi|323178483|gb|EFZ64061.1| lateral flagellin [Escherichia coli 1180]
gi|323181557|gb|EFZ66977.1| lateral flagellin [Escherichia coli 1357]
gi|323191382|gb|EFZ76644.1| lateral flagellin [Escherichia coli RN587/1]
gi|323379889|gb|ADX52157.1| flagellin domain protein [Escherichia coli KO11]
gi|323976259|gb|EGB71352.1| flagellin [Escherichia coli TW10509]
gi|327254565|gb|EGE66181.1| lateral flagellin [Escherichia coli STEC_7v]
gi|331045590|gb|EGI17716.1| flagellin D [Escherichia coli M605]
gi|331065780|gb|EGI37664.1| flagellin D [Escherichia coli TA271]
gi|331070803|gb|EGI42162.1| flagellin D [Escherichia coli TA280]
gi|332103752|gb|EGJ07098.1| lateral flagellar flagellin [Shigella sp. D9]
Length = 304
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 93/288 (32%), Gaps = 3/288 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI TN+++M+A + + +L +R+++G R++ +AD+AA IA + + + +
Sbjct: 1 MLSINTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQS 117
I ++ + A + + DV+ +K+ T ++Q E +L
Sbjct: 61 GVALSNINDATAMLQTADSMFDEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ D+ + +++ G N S+T + + T++ T++
Sbjct: 121 QMSDMLQNTTYGGTNLFGVSGTSNTGTDGLFQSAVTFQVGAESSDTMTVNISSQLNTLVT 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
D S + + T + + + L A+
Sbjct: 181 DLSAISNSFSADQADTTGTAGVSGGTELTASGSANQMITSISTAMDDVSQIQSKLGASIN 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
+ T + + S
Sbjct: 241 RLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITM 288
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ + D + A A + S +
Sbjct: 68 NDATAMLQTADSMFDEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQ 127
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ T + + + ++ TL +
Sbjct: 128 NTTYGGTNLFGVSGTSNTGTDGLFQSAVTFQVGAESSDTMTVNISSQLNTLVTDLSAISN 187
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
S T + + +M++ I T + + K+G+ +R++ +
Sbjct: 188 SFSADQADTTGTAGVSGGTELTASGSANQMITSISTAMDDVSQIQSKLGASINRLNDTAN 247
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ M+D E +G ++D D A+E++ ++ Q Q + L N+ ++ + SL +
Sbjct: 248 NLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVSSLLQ 304
>gi|253681497|ref|ZP_04862294.1| flagellar hook-associated protein 3 [Clostridium botulinum D str.
1873]
gi|253561209|gb|EES90661.1| flagellar hook-associated protein 3 [Clostridium botulinum D str.
1873]
Length = 345
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 23/216 (10%), Positives = 65/216 (30%), Gaps = 1/216 (0%)
Query: 6 TN-HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN + + +R N+ +Q + +SG + +D+ + + + +D S
Sbjct: 4 TNKMLSNNFLADMRANLENVNKIQQQNTSGKKFRKPSDDPFAVARSMQLHTDINTNKQYS 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIAR 124
I S+ +D + +A +V+ ++ + G ++ ++ ++ ++++
Sbjct: 64 KNITDVSNWLDTTDTALGQAGNVLQRVRELLITSGNGGYTKSERRAIKDEINEKIGEMSQ 123
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ N ST + Y +D +
Sbjct: 124 ILNTNFSGNYIFGGTRSTTKPMDVSKNDDGNVSLNYISKDGRQYNIDNSKKPIQIEAVDK 183
Query: 185 ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ + + LK ++
Sbjct: 184 KPFDKTLVEDEYNQVTSRLKVEVSQGVTMDYNVTAT 219
Score = 49.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 30/326 (9%), Positives = 79/326 (24%), Gaps = 5/326 (1%)
Query: 109 QSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
+ + +++ L ++ + N ++A+S+ + N + D
Sbjct: 10 NNFLADMRANLENVNKIQQQNTSGKKFRKPSDDPFAVARSMQLHTDINTNKQYSKNITDV 69
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
+T G + + + + + I L T
Sbjct: 70 SNWLDTTDTALGQAGNVLQRVRELLITSGNGGYTKSERRAIKDEINEKIGEMSQILNTNF 129
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
+ + + + + D
Sbjct: 130 SGNYIFGGTRSTTKPMDVSKNDDGNVSLNYISKDGRQYNIDNSKKPIQIEAVDKKPFDKT 189
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR 348
+ N +TS S + D ++ + L+
Sbjct: 190 LVEDEYNQVTSRLKVEVSQGVTMDYNVTATDVLEFKNEAGDSINLMNLFKDITTHLDSED 249
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
+ + ++ + I ++G+ +RI ED K + K +
Sbjct: 250 PKEINKLIGED-----LTKVSDTISNLLKIRAEVGAKQNRIEGAEDRNKDGTFNMTKILS 304
Query: 409 RLVDADMASESTRLSALQTQQQLAVQ 434
+ D + T + + T ++Q
Sbjct: 305 KHEDVNYTENMTNYATMLTVYMASLQ 330
>gi|50954398|ref|YP_061686.1| flagellin-like protein [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50950880|gb|AAT88581.1| flagellin-like protein [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 277
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 37/97 (38%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ +D I+ + + +G+ +R++ + + +++ + D D
Sbjct: 181 TTASGSLAGIGTLDANIQSISTTSASLGATQNRLNYVASTLATNIENLQEAKSTIADTDT 240
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
ASE + L Q LS N ++L L +G
Sbjct: 241 ASEMANFTKLNVLTQAGTAMLSQANQQNQQVLKLLQG 277
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 59/148 (39%), Gaps = 3/148 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I TN SA+ + N L ++S ++ AD+AA ++ ++S G L+
Sbjct: 4 TIKTNVSALQTINAINKNNAALASSMQKLSIASAINTTADDAAGSAVVIGLQSQIGGLTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
G + V IA + D++ +++ I++E+ L QL
Sbjct: 64 AGKNTASGIALVQIASGALKSVSDILQRVRDLTVQAGTDTNDTNSRLDIRTEVNALADQL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAK 147
I+ +++NG L + + +
Sbjct: 124 TQISASTNYNGVKLLDSTANLTLQVGSG 151
>gi|323703357|ref|ZP_08115007.1| flagellar hook-associated protein 3 [Desulfotomaculum nigrificans
DSM 574]
gi|323531720|gb|EGB21609.1| flagellar hook-associated protein 3 [Desulfotomaculum nigrificans
DSM 574]
Length = 307
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 25/196 (12%), Positives = 60/196 (30%), Gaps = 3/196 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M + A + + ++ Q+++S+G + +DN + S + +
Sbjct: 1 MLRVSNILMANNMANYIQKNLQRSAKSQEQISTGKTIIRPSDNPSEISHLMAVNATIAGN 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ I G + ++ + + + K D + I+ ++ +L
Sbjct: 61 EQYARNIQDGLAYLNQSDTALDTVGKYLQDAKTLALQAANGTLTDADREHIKEQVDKLID 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++DIA S + T G+ +G Q T + +
Sbjct: 121 AVKDIANSSLGGKYLFAGTKNDLPPFRRVDLPDGTTEIHYDGNEQPVTREILFQAPYEVT 180
Query: 178 DSSTDGTERYGLLDRN 193
+ +G L
Sbjct: 181 SAGAGANGVFGNLSGT 196
Score = 41.3 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 7/73 (9%), Positives = 29/73 (39%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + ++ +D +G+ + + ++ ++ ++ + + AD+A +
Sbjct: 218 DINQSLTELDNAHDAILTKRVGVGARTRHLEAVKEQLEDQEVRLKSVLVDIQGADIAKLT 277
Query: 420 TRLSALQTQQQLA 432
++ Q Q +
Sbjct: 278 IEVAQNQLVHQAS 290
>gi|89214374|gb|ABD64499.1| flagellin [Bacillus mycoides]
Length = 219
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 48/144 (33%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + ++ S + A+A + +V+
Sbjct: 1 EHLATGKKLNNASDNPANIAIVTRMHARASSMRVAIRNNEDAISMLRTAEAALQTVTNVL 60
Query: 89 STIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + + T
Sbjct: 61 QRMRDLAVQSANDTNSNKNRDSLNKEFQSLTEQIGYIDETTDFNDLSVFDGQNRTVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNVTKHIPPSPTQHDINIST 144
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A + A + T + + +
Sbjct: 2 HLATGKKLNNASDNPANIAIVTRMHARASSMRVAIRNNEDAISMLRTAEAALQTVTNVLQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+D + T T + + + L
Sbjct: 62 RMRDLAVQSANDTNSNKNRDSLNKEFQSLTEQIGYIDETTDFNDLSVFDGQNRTVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNVTKHIPPSPTQHDINISTEQEARAAIRKIEGALQNVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSTALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|114565762|ref|YP_752916.1| flagellin-like protein [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114336697|gb|ABI67545.1| Flagellin and related hook-associated proteins-like protein
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 870
Score = 84.8 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/283 (9%), Positives = 82/283 (28%), Gaps = 4/283 (1%)
Query: 1 MTSILTNHSAMSAS-QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M +TN ++ + L + ++ Q ++S+ +++ +D+ A + ++++
Sbjct: 1 MMMRVTNKMLVNELNRNLTNNMLRMDKFQRQLSTTRKINTPSDDPAGLVKSLRLRTNLIE 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQ 116
I +D A +++ + ++ +I ++
Sbjct: 61 GEQYLTNINESLGFLDTTDAAFGNINEILHEAREMAVKASTDSNVKPDFAAMAKKIREMN 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
QL+ IA + + + +++ + S + V + E +
Sbjct: 121 EQLKMIANSTYGSKYIFAGSNVTETPYENGNWRGNSEAMETEIGVGVKIPFNIDAREFFV 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+ ++ + Q ++ T + +
Sbjct: 181 GRLDELQVDPASGINAEKVVGKNLQEGNYKVNYSLVSNAARGTARESGNMLTADNNTGMF 240
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+D A A + + A + + + AT
Sbjct: 241 FFYDNAGTPANASIAIGTAAGLTASVYSGFLNIKVTTVDEATD 283
Score = 50.5 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/274 (9%), Positives = 69/274 (25%)
Query: 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKK 221
+Y TV + + G L + + + +
Sbjct: 583 WKHNDNYLPQQLTVNIKAHLYTNGSDGKLHHKYVELDNVVIDPETARGQKIFKISAKDIN 642
Query: 222 FKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR 281
T + + + + + + ++
Sbjct: 643 NTNFTEDLVIWNNGAPLGGIDPDSPQLKAGDKTVISFSAQGRAGAQNANIDFSYTSAKGE 702
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
N R K T+ + Y + T P S
Sbjct: 703 KVNGSSSFRFDVKTFDYETTELKFFTLNEETGLAYSGEIALETGVFAASDPAVSFSWRDG 762
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ + A + + D +++ +G+ +R+ LQ+ ++ +++
Sbjct: 763 LFGYMDDLARKIEAGKVSETSLQIGGDDRRMEELLLYRSTVGARVNRLELQQSRLESIQE 822
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ + DADMA +L + + ++ A
Sbjct: 823 TFTSLLSKTEDADMAEVIMQLQLQENVYRASLAA 856
>gi|300854138|ref|YP_003779122.1| putative flagellar hook-associated protein [Clostridium ljungdahlii
DSM 13528]
gi|300434253|gb|ADK14020.1| putative flagellar hook-associated protein [Clostridium ljungdahlii
DSM 13528]
Length = 468
Score = 84.4 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 49/452 (10%), Positives = 127/452 (28%), Gaps = 22/452 (4%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + ++ NL VQ +VSS S +D+ A ++S +
Sbjct: 3 ITNKTLSDNFLADMQRNLENLSKVQQQVSSTKNFSKPSDDPINVERAMQLQSSVNYTTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I ++ ++ + + V+S I+N + + +++ +A
Sbjct: 63 GSNIKTANTWMETTDTTLGQIGTVLSNIRNNLEQ-AGGVYTQDEKDKINDAVSQEVQQVA 121
Query: 124 R--GSSFNGENWLRTDLG------SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
++F GE G ++T + + +D N + +++ +
Sbjct: 122 TLLNTNFQGEYIFGGTAGLSKPITTTTDANGIVSLQYADKDGNAVQFLPSVESSGFDKGN 181
Query: 176 LLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
S T N D++ ++ T + ++
Sbjct: 182 WEGKSITFTVDGKDYKVNLNSSYSGIDDVVKDLNNKIQGNNVTPTPANPPTAADPGVRDK 241
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
G I + + + S + S + +D + +
Sbjct: 242 INVVKTDDGNIKIVAINSSDTITLKDSDVSDLSSAKGKQLSNMTMENIGADKNIEISQGV 301
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
++ + ++ D+ + ++ + + +
Sbjct: 302 VLSYNATASDMMQYGNNYNTTSGDSINALVNRIQHHLAGQVLNDAAAGDPGAINIPNSDG 361
Query: 356 NEKLAMEEM-------------VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + ++ ID K A KIG+ R+
Sbjct: 362 TPHYYVWKTDEDAAKKELIGQDLTDIDAASKNVLAIRSKIGAKEQRMSDLSTQNGSSITD 421
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+++ + + D D+ ++ T Q +Q
Sbjct: 422 LKEVLSKTEDIDITQKTIEYYTSITVYQACLQ 453
>gi|89214296|gb|ABD64460.1| flagellin [Bacillus cereus]
Length = 219
Score = 84.4 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 48/144 (33%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + ++ S + A+A + +V+
Sbjct: 1 EHLATGKKLNNASDNPANIAIVTRMHARASSMRVAIRNNEDAISMLRTAEAALQTVTNVL 60
Query: 89 STIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + + T
Sbjct: 61 QRMRDLAVQSANDTNSNKNRDSLNKEFQSLTEQIGYIDETTDFNDLSVFDGQNRTVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNVTKHIPPSPTQHDINIST 144
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A + A + T + + +
Sbjct: 2 HLATGKKLNNASDNPANIAIVTRMHARASSMRVAIRNNEDAISMLRTAEAALQTVTNVLQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+D + T T + + + L
Sbjct: 62 RMRDLAVQSANDTNSNKNRDSLNKEFQSLTEQIGYIDETTDFNDLSVFDGQNRTVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNVTKHIPPSPTQHDINISTEQEARAAIRKIEEALQNVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSTALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|90408067|ref|ZP_01216238.1| flagellar hook-associated protein 3 [Psychromonas sp. CNPT3]
gi|90310824|gb|EAS38938.1| flagellar hook-associated protein 3 [Psychromonas sp. CNPT3]
Length = 501
Score = 84.4 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 52/506 (10%), Positives = 134/506 (26%), Gaps = 67/506 (13%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + +Q + + L +S+ RV + +D+A + Q +K D
Sbjct: 3 ISSQVFFQRNTQSVFNNQSELSEKNIHLSTQKRVINGSDDAVAIATIQRLKQDLSMADQH 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ + + ++++ +++ ++ + ++I +E+ L+ +L
Sbjct: 63 VQNGEMAETANALESISLAQSTNILQRMRELMVSSGNATYSADGREAIATELKHLREELI 122
Query: 121 DIARGSSFNGENWLRTDL-GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A N + + + + D+ +
Sbjct: 123 GVANTKDGNSQYIFSGFEVDTLPFQKNEFGTIEYHGDEGDTSYQIGPGVTIQGNDPGSAI 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
E G + D+ + + + + S
Sbjct: 183 FMQVPEGNGSFVAEANPNNSGSGVLDVASIIDSKVASQFPDQDYNISISETLPVGTKKYS 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ ++ + + T GS +P+ A + + + +
Sbjct: 243 VYSTAEQSVTGSASIKISKVDLTDANIGSVNPNSVYPAAGSDVSIDFVATLVPGEFEVRI 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT------------ 347
+ + ++ N + +++ + T
Sbjct: 303 NNQSSLPSIYNANNPQQEITVNGISIEVSGMPSNGDQYKMTKYIEPTTYEEGQSIEFNGI 362
Query: 348 -----------------RHANTDAYNEKLAMEEMVS---------------------FID 369
+ D ++ + + ID
Sbjct: 363 KTKLKGQVNEFDSFSLRQSGTKDIFSTIQDAIDALMMPGDDNGPTAQREMRLDTVRHQID 422
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR----LSAL 425
++ + +G+ I Q + + +K + L D DMAS + +S L
Sbjct: 423 NTMQNVSTVVTSVGARRRTIINQHESTLDFKLTNQKTLSNLEDLDMASAISEFKMQMSLL 482
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
+ QQ +Q S LSLF+
Sbjct: 483 EITQQTFMQMQS---------LSLFK 499
>gi|163744338|ref|ZP_02151698.1| flagella associated protein [Oceanibulbus indolifex HEL-45]
gi|161381156|gb|EDQ05565.1| flagella associated protein [Oceanibulbus indolifex HEL-45]
Length = 322
Score = 84.4 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 48/136 (35%), Positives = 83/136 (61%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SI TN+SAM+A LR +N L Q+R+S+GL+VS DNAAY++I++ MK D+G
Sbjct: 1 MSSINTNNSAMNALSTLRSVNQGLNETQNRISTGLKVSSGKDNAAYFAISETMKGDSGMT 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV++++ L + V A+ G + D+ + ++K+ E I+S++T+L + +
Sbjct: 61 KAVNESLTLTKNSVATARLGAEQFSDLATEFRDKVAFAQENKGGLDEIESDLTRLVADMA 120
Query: 121 DIARGSSFNGENWLRT 136
I S+FNG++ +
Sbjct: 121 AIMSQSTFNGDDLVNA 136
Score = 66.3 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/319 (17%), Positives = 105/319 (32%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ + S +SV N + D S T +
Sbjct: 4 INTNNSAMNALSTLRSVNQGLNETQNRISTGLKVSSGKDNAAYFAISETMKGDSGMTKAV 63
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
N + + + + S + + K+A D + +A + +
Sbjct: 64 NESLTLTKNSVATARLGAEQFSDLATEFRDKVAFAQENKGGLDEIESDLTRLVADMAAIM 123
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+ + + A A + + + S
Sbjct: 124 SQSTFNGDDLVNAGKKGAAGANAVAGTMDAYGAVTAGATPSAAQADRSIITGISRDTAGA 183
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ L+++ + I ++ T + + + +++ DT
Sbjct: 184 LQTTTITVSPVDLNAQLETFTLIADSFASRAGATTDVNASGGIDGDEYLGNVLALADTAT 243
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ AA +G I Q++F+ + D ++ GVG +VDA+M E+ RL ALQ QQQLA
Sbjct: 244 QATVDAATSLGQSEKSIERQQEFLTKLSDNLDSGVGAMVDANMEEEAARLQALQVQQQLA 303
Query: 433 VQALSIVNNSTARILSLFR 451
Q+LSI N + ILSLFR
Sbjct: 304 SQSLSIANQAPQNILSLFR 322
>gi|294140757|ref|YP_003556735.1| flagellin [Shewanella violacea DSS12]
gi|293327226|dbj|BAJ01957.1| flagellin, putative [Shewanella violacea DSS12]
Length = 232
Score = 84.4 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 48/134 (35%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ + + +++SSG +++ AAD+ A IA + S +
Sbjct: 15 LSNFEKLQEKRQELIEKLSSGRKINKAADDPAGLQIANRLTSSINEAEIRARNARDEQGM 74
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
++I + + D + + D ++IQ+E+ QL ++ IA
Sbjct: 75 LNIKASQYASITDNLVRARELTILAGNPIYDKQAIQAELNQLTDEINVIAAEVLGQDNFV 134
Query: 134 LRTDLGSSTASIAK 147
D A++
Sbjct: 135 SGLDSSDPNAALTA 148
Score = 56.7 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 29/77 (37%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ ++ ID +AG G+ + + + D ++ R+ D D A
Sbjct: 138 DSSDPNAALTAIDAASASIDDSAGTDGAQYNGLDSRIDSYQISSINNSAARSRIQDTDYA 197
Query: 417 SESTRLSALQTQQQLAV 433
S L + Q ++AV
Sbjct: 198 QSSADLLKTELQLKIAV 214
>gi|167646848|ref|YP_001684511.1| flagellin domain-containing protein [Caulobacter sp. K31]
gi|167349278|gb|ABZ72013.1| flagellin domain protein [Caulobacter sp. K31]
Length = 273
Score = 84.4 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 3/156 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN AM A Q L N L+V Q R+++G +V +A DN A W++A+ + +L+A
Sbjct: 5 SINTNAGAMIALQNLNSTNSELQVTQQRINTGKKVGNAKDNGAIWAMAKNQSTTANSLNA 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQL 119
V D++ G S +D+A A D++ +K K A + ++ S + + T L+ Q+
Sbjct: 65 VKDSLQRGQSTIDVALAAGDTVTDLLGKMKEKALAASDTSLNTASFNALVSDFTSLRDQI 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR 155
+ FNG + +
Sbjct: 125 TKAVTNAKFNGVSIADGSTTKLAFLANSDGSQFTVS 160
Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/97 (42%), Positives = 62/97 (63%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ A + M++ I + AT +G+ S+ + F+ ++D+++ GVG LVDAD
Sbjct: 177 FANAAAAKTMITTISNALGTATNKLASLGTSSTGLDTHLTFVGKLQDSLDAGVGNLVDAD 236
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+A ES +L +LQT+QQL VQALSI N S++ ILSLFR
Sbjct: 237 LAKESAKLQSLQTKQQLGVQALSIANQSSSSILSLFR 273
>gi|94263280|ref|ZP_01287096.1| Flagellin-like:Flagellin hook IN [delta proteobacterium MLMS-1]
gi|93456363|gb|EAT06487.1| Flagellin-like:Flagellin hook IN [delta proteobacterium MLMS-1]
Length = 1321
Score = 84.4 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/265 (11%), Positives = 73/265 (27%), Gaps = 9/265 (3%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI N L ++N ++ + ++SSG ++ +DN A ++++ +
Sbjct: 5 MQSIYANI-----QTNLGNLNKDMNRINQQISSGKQMDKISDNPVNLVNALGLRTNISEI 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
I G + ++ ++ +++ D+++ K + ++ E+ L
Sbjct: 60 GQYQKNIKYGETVINASEDALTQMNDLVTRAKTLAIQQASGSMTPENRENAAQEVKNLWE 119
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q I S+ N + + RD + +
Sbjct: 120 QAI-ILANSTVNNKYIFGGFRTDRYTEAEPAPFVQGARDGYFVHGNNPVPEGITGPLTGK 178
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ G L N V + + + + A
Sbjct: 179 EVDNSQNLVTGDLLINDHDVVALHDTPAPVTTDPVTNTGLGAGDLAINGHDIVVTFDDTA 238
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTT 262
+ A + T
Sbjct: 239 VNGRYMENANALADTVNQVNEDHET 263
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A+++ ++ +DT T G+ ++RI +Q + ++ A + + L D D+
Sbjct: 1233 ALQKSIAELDTLHNEITNQVSDFGARANRIEVQNNIYMNLKLATSENLSELEDTDLVEAI 1292
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARIL 447
L A +T Q A LS + S L
Sbjct: 1293 MELKAKETAYQAA---LSSASRSMQMSL 1317
>gi|89214360|gb|ABD64492.1| flagellin [Bacillus thuringiensis serovar yunnanensis]
Length = 219
Score = 84.4 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + A S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANITIVTRMHARASGMRAAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QHMRDLAVQSSNGTNSNKNRYSLNKEFQSLTEQIGYIGETTKFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IGHTINMTKHIPPSPTQHDIKIST 144
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 63/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANITIVTRMHARASGMRAAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++ + T T + + + L
Sbjct: 62 HMRDLAVQSSNGTNSNKNRYSLNKEFQSLTEQIGYIGETTKFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTINMTKHIPPSPTQHDIKISTEQEARTAIRKIEEALQSVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|269976256|ref|ZP_06183252.1| flagellar hook-associated protein 3 [Mobiluncus mulieris 28-1]
gi|269935585|gb|EEZ92123.1| flagellar hook-associated protein 3 [Mobiluncus mulieris 28-1]
Length = 336
Score = 84.4 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 48/126 (38%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T + T+ A +++ L ++++SG R+ A+D+ A + ++ + A
Sbjct: 3 TRVTTSMMANDTLANVQNNFQRLADANEKMASGKRMKFASDDPASSVSSMRLRKELAATE 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
I S + A + M + K K+ V +S+ + L+ +
Sbjct: 63 QYKRNIDDAQSWMQTADSAMDTVSKLYLHSKTKLINSVSGAMGKESLHALAADLRQNAQA 122
Query: 122 IARGSS 127
I ++
Sbjct: 123 IMTQAN 128
>gi|167945631|ref|ZP_02532705.1| Flagellin-like protein [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 117
Score = 84.4 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 42/112 (37%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN + ++ + L Q ++++G RV D+ A + +++ +
Sbjct: 2 STNLIFENGLNRMLETQSKLVKTQQQIATGRRVLSPQDDPAAAAYILGLRNTISTVEQYQ 61
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ 116
D +++++ + + +++ I+ G ++ + ++
Sbjct: 62 DNSERVRARLELEETTLQGVTNLLPRIQELAVQGQNDALTAEQRNAIAEEVL 113
>gi|225181621|ref|ZP_03735062.1| flagellar hook-associated protein 3 [Dethiobacter alkaliphilus AHT
1]
gi|225167729|gb|EEG76539.1| flagellar hook-associated protein 3 [Dethiobacter alkaliphilus AHT
1]
Length = 296
Score = 84.4 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 19/197 (9%), Positives = 51/197 (25%), Gaps = 3/197 (1%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+ + + + Q+ +SSG ++ +++ S + I
Sbjct: 11 TVIRNVNRNLSTMNHYQNMLSSGKAINKPSEDPIAVSRILGYNTSLDNNEQYKRNIDTAR 70
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSF 128
S +D + + +V+ + G D +++ E+ +L + L A S
Sbjct: 71 SWIDTTEDALHGINEVLQRARELAVYGANDSLSPEDRRALAMEVDELTNVLVQFANTSYE 130
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
+ + + D+ + + +
Sbjct: 131 GRNVFAGHQTTTVPFHRDGEGEVDYHGDEGAIRWEVAPNVIIQGNIDGESLFMHEDSQIF 190
Query: 189 LLDRNHKIKVEPQVLKD 205
K + D
Sbjct: 191 SRMNELKDALNRADTAD 207
Score = 53.6 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/225 (8%), Positives = 53/225 (23%)
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
+ + + + Q + + +
Sbjct: 58 NNEQYKRNIDTARSWIDTTEDALHGINEVLQRARELAVYGANDSLSPEDRRALAMEVDEL 117
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+V +++ T G + + + D
Sbjct: 118 TNVLVQFANTSYEGRNVFAGHQTTTVPFHRDGEGEVDYHGDEGAIRWEVAPNVIIQGNID 177
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
S + + + + + + ++ + I G++S+ +
Sbjct: 178 GESLFMHEDSQIFSRMNELKDALNRADTADINQSIADLSQSIDWVLDKRAAHGALSNGLE 237
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
L E+ + + +L D D A S + T + ++ A
Sbjct: 238 LTENNNGAQKLNLTTLRSKLEDIDFAETFMNYSTMDTLYRASLSA 282
>gi|157738453|ref|YP_001491137.1| flagellin [Arcobacter butzleri RM4018]
gi|315636753|ref|ZP_07891982.1| bacterial flagellin subfamily [Arcobacter butzleri JV22]
gi|157700307|gb|ABV68467.1| flagellin [Arcobacter butzleri RM4018]
gi|315478970|gb|EFU69674.1| bacterial flagellin subfamily [Arcobacter butzleri JV22]
Length = 307
Score = 84.4 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + N ++ +++S+GLRV+ AAD+A+ +IA +++ +++
Sbjct: 3 INTNVSSLTAQEAASNTNKSITNSLEKLSTGLRVNKAADDASGLAIADKLRTQATSINQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ + I M++ ++ TIK K+ T +I +IT+L QL
Sbjct: 63 IANGNSAVALLQITDKSMAEQSSILDTIKAKLIQANTDTTSVAGRTAIAKDITKLLQQLN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTAS 144
+I +++NG N L+ ++ AS
Sbjct: 123 NIGEQTNYNGTNLLQNARTTADAS 146
Score = 83.3 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 36/111 (32%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
++ A T + + ID I G IGS ++I +
Sbjct: 197 GAKMSAGATAGTTGVFTRTMAQSGQKAIDKAITTLNGYRGDIGSTQNQIESAIRNLSTQA 256
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + D D A ES + L Q A+S N +L L +
Sbjct: 257 TNIKNAESVIRDVDYAQESANFNKLNIISQAGSYAISQANAVQQNVLKLLQ 307
>gi|9843795|emb|CAC03722.1| flagellin [Pseudomonas fluorescens]
Length = 433
Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 31/89 (34%)
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
+ ++ +D I +G+ +R+ D ++ ++
Sbjct: 338 TSVAQTDVTDANNAANAIAVLDKAIGTIDGVRSGLGATQNRLTTTADNLQNIQKNSTAAR 397
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQAL 436
+ D D ASE+ L+ QT Q + L
Sbjct: 398 STVQDVDFASETAELTKQQTLQSASTAIL 426
>gi|170748919|ref|YP_001755179.1| hypothetical protein Mrad2831_2501 [Methylobacterium radiotolerans
JCM 2831]
gi|170655441|gb|ACB24496.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 405
Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 61/451 (13%), Positives = 147/451 (32%), Gaps = 46/451 (10%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SI + + L+D + Q+R+++G V+ A DN + +Q + + +L
Sbjct: 1 MSSITLSAATRQNLLSLQDTAQLMATTQNRLATGKTVNSALDNPTNFFTSQALDGRSSSL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+++ D + G + A G++ ++ K+ + + + + +
Sbjct: 61 NSLLDGVSNGIQSIQAANQGITSIQKLVDQAKSIANQALSTQLSTTGTAANAYSASTASQ 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + + S +A++A
Sbjct: 121 TVLLTINGTSVSATVAASSSISATVAA--------------------------------- 147
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
V A ++ + K+ + A ++ N+
Sbjct: 148 -------------LNSAVSSASTASSGSFGAGAIFSVDSTGTKIVLNAQADVEFQNSGSQ 194
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A G A +T + S S ++ + N + ++ +
Sbjct: 195 TALGFTASATTASTYGTAASTVVSSDLSISGVTQRASLANQYNNLLNQITQLAGDASYNG 254
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + + + S + + N + +
Sbjct: 255 VNLIAGKGNDLNIKFNNTGSSTLNVASVDATASGLGLSSITSSNNSSSQNGLGNFLLNSD 314
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + ++ + + T+AA +GS S + ++DF K + + ++ G L +AD+ E+
Sbjct: 315 VNKTLATLTSAGNTLTSAASSLGSNLSVVQNRQDFSKQLINVLQTGSANLTNADLNQEAA 374
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
AL T+Q + + ALS+ N++ +L L R
Sbjct: 375 NSQALSTRQSMGISALSLANSAQQGVLQLLR 405
>gi|89214364|gb|ABD64494.1| flagellin [Bacillus thuringiensis serovar chanpaisis]
Length = 219
Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 47/144 (32%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + + T
Sbjct: 61 QRMRDVAIQSANDTNSNKNRDSLNKEFQSLAEQIGYIDETTEFNDLSVFNGQNRTVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNVTKHIPPSPTQHDINIST 144
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNNASDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+D + T + + + L
Sbjct: 62 RMRDVAIQSANDTNSNKNRDSLNKEFQSLAEQIGYIDETTEFNDLSVFNGQNRTVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ SR+ +
Sbjct: 122 GHTVNVTKHIPPSPTQHDINISTEQEARAAIRKIEEALQNVSLHRADLGAMISRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSTALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|46578935|ref|YP_009743.1| flagellar hook-associated protein FlgL [Desulfovibrio vulgaris str.
Hildenborough]
gi|120603464|ref|YP_967864.1| flagellar hook-associated protein 3 [Desulfovibrio vulgaris DP4]
gi|46448347|gb|AAS95002.1| flagellar hook-associated protein FlgL, putative [Desulfovibrio
vulgaris str. Hildenborough]
gi|120563693|gb|ABM29437.1| flagellar hook-associated protein 3 [Desulfovibrio vulgaris DP4]
gi|311232793|gb|ADP85647.1| flagellar hook-associated protein 3 [Desulfovibrio vulgaris RCH1]
Length = 523
Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 12/203 (5%), Positives = 52/203 (25%), Gaps = 2/203 (0%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
+ + +L + SS +++ +D+ + ++ G + +
Sbjct: 7 MMYQNFLGNMNSSLADLVESNIQSSSQKQINRPSDDPVGMARVLNYRASLGDVEQYKKNV 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIAR--G 125
+++A + ++ V++ IK ++ + +L+ Q +
Sbjct: 67 DTAKGWLNLADSTLTSMNTVLTRIKGLAEQAATSSVSPENRKQISFELRQQYEQLINLAN 126
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+ F + + + + + ++ ++ +
Sbjct: 127 TKFENRHIFAGHKYDEAPFVQGLQVTTNDPNLQSAALPAGTEFSVEGASPTSIMVQFLDS 186
Query: 186 RYGLLDRNHKIKVEPQVLKDIDV 208
+
Sbjct: 187 GTVGGATPLNYRFSADGGASWQT 209
Score = 51.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 36/106 (33%), Gaps = 3/106 (2%)
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
+ + R N + +++ + ++ K AA IG +R+ + +
Sbjct: 413 TTPNMFETVGRLVAFAETNNQDGVQKCLDELNGVSKTILTAAASIGGRENRLDVVSGVLD 472
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQL---AVQALSIVN 440
+ + + D D + TRL+ Q + + +N
Sbjct: 473 NQKLDQTTRMSAVEDVDFSELMTRLAQEQLIYNSVLKSSSMIMQMN 518
>gi|254519435|ref|ZP_05131491.1| flagellar hook-associated protein 3 [Clostridium sp. 7_2_43FAA]
gi|226913184|gb|EEH98385.1| flagellar hook-associated protein 3 [Clostridium sp. 7_2_43FAA]
Length = 331
Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 21/146 (14%), Positives = 58/146 (39%), Gaps = 2/146 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + S + L ++ + D+++SG + +DN + + + D GA +
Sbjct: 3 ITNQMMSKSFLRDLGRNQGYMKKLNDQLTSGKEIRRPSDNPFKVARSMQLHRDIGANTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
++ I ++ +D + + + + + + S ++ ++ ++ +IA
Sbjct: 63 NENIKDTTNWLDTTDTALEQLGNSFQRFRELMVSAGNAAYGSDEKKAIKDEMNEKVNEIA 122
Query: 124 R--GSSFNGENWLRTDLGSSTASIAK 147
+ SSF+G+ G++
Sbjct: 123 QILNSSFDGKYIFGGTKGNTKPIGTN 148
Score = 46.7 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 30/301 (9%), Positives = 68/301 (22%)
Query: 137 DLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
+ G + G IR + L + + +
Sbjct: 19 NQGYMKKLNDQLTSGKEIRRPSDNPFKVARSMQLHRDIGANTQYNENIKDTTNWLDTTDT 78
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
+E S + + Q + +
Sbjct: 79 ALEQLGNSFQRFRELMVSAGNAAYGSDEKKAIKDEMNEKVNEIAQILNSSFDGKYIFGGT 138
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
GT+ + G TV
Sbjct: 139 KGNTKPIGTNKDIVTGNNSIHLSGNDGEVLELDNLDESVQNQIGMINKKLTVEVSQGVTM 198
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
+ +T L KD + ++ + DA E + +D I
Sbjct: 199 DYNVCATDLLLFKDKNGSDVNVMGLLKEITDNIGSEDASVSGKVTNENLKTMDETIANLL 258
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
++G+ +R+ D + ++ + + D D A ++ + Q+ ++Q
Sbjct: 259 KIRAEVGAKQNRMESAGDQNEEQNFNLKDILSQTEDIDFAEKNIEATVAQSVYMASLQVS 318
Query: 437 S 437
+
Sbjct: 319 A 319
>gi|296125660|ref|YP_003632912.1| flagellar hook-associated protein 3 [Brachyspira murdochii DSM
12563]
gi|296017476|gb|ADG70713.1| flagellar hook-associated protein 3 [Brachyspira murdochii DSM
12563]
Length = 417
Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/423 (10%), Positives = 103/423 (24%), Gaps = 31/423 (7%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
++ +E Q R+S+G RV N + K+ ++ + I G
Sbjct: 11 RTVSTIKRNYSEMEASQTRLSTGQRVQYPHQNVTATINSIYYKTRMSSVDRYQNNIVDGK 70
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
++ +A MS ++ ++ G + +++ + I S +
Sbjct: 71 ERLSVAHDSMSAITQALNRARDLAVQGANSTYGADDRAKMAMEVEEMIERIYDISKTQSK 130
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
G S F + + E L++
Sbjct: 131 -------GEFVFSGTSIKTAPFRAFYGHDEKAGRSIIKSVMYEGDGNPQNREIENGQLIN 183
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
+S DAS ++ + + +
Sbjct: 184 VATPGNYAFWGTDMEIISTTDASAYVAAENQDIMIDDMVINIKQGDNIETIVQRINDANG 243
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+A + +
Sbjct: 244 NVSASIGDLKGGQKVIQLKTGTPHKILLQDLAGGTVLQ---------------------- 281
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
V + P + +G S+ I + + E + +ID+
Sbjct: 282 --DIGLVRVGAANTPENNYEPSALVTGKSVFESLIYLRDAMLNDDVRAIGSEALGYIDSS 339
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ S +R+ + + + A+E+ + + + D A E + Q
Sbjct: 340 LDNVATVQANASSKVTRLDMGYTSFEDQKLAIEEALAKNENIDYAEEIVNFNMWQYAHNA 399
Query: 432 AVQ 434
++Q
Sbjct: 400 SLQ 402
>gi|84514826|ref|ZP_01002189.1| flagellar hook-associated protein 3 FlgL [Loktanella vestfoldensis
SKA53]
gi|84510985|gb|EAQ07439.1| flagellar hook-associated protein 3 FlgL [Loktanella vestfoldensis
SKA53]
Length = 409
Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 52/433 (12%), Positives = 125/433 (28%), Gaps = 34/433 (7%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ +N +E+ Q ++S+G +++A++ ++ L +
Sbjct: 2 LTRFSQVNKEIELRQTKISTGREITEASEKPIEAVKLSALEQSLTQLKGFQRNTTTAQQR 61
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIARGSSFNG 130
+ + ++ +M+ ++ + + + + + ++ Q + L D+A + +
Sbjct: 62 LSLGDTVLASVDGIMAQLRERAISANTDTVSASDLAAIRVDVAQSREALIDLANSRTSDD 121
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+ + R D G+ + + P +V + +
Sbjct: 122 QALFGGYATDIQPFTPDTNGRIQYRGDGGQHTLAASETTRLPTSVNGAEVFMQVDTSDGV 181
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
I + D S + + L+ + + G +I
Sbjct: 182 ASIFDIVDSFEAALLTDGSYASTLSADAGDELSLSFNGDRVPRDVSFDLQGPSGSTSITA 241
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
+ S + + +
Sbjct: 242 TDVVGGSHDQLKSAINKKSDETGVIATVV------------------------------- 270
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
G+ T + L + K E+ S T+ ++ + +
Sbjct: 271 GGHLVLSAATGTIALSALKIEGVELASREPRFTIMADGEPPQTMVPTAQTLDAQLEKLVQ 330
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ + KIG+ R QE ++ A+E V L AD+ T L AL +
Sbjct: 331 AGQDIAVSRTKIGARLKRAEDQEAALQSRALALETDVNELGSADLGKVVTELQALLVSRD 390
Query: 431 LAVQALSIVNNST 443
A+QA S + S+
Sbjct: 391 AAMQAYSRIGQSS 403
>gi|254421140|ref|ZP_05034864.1| Bacterial flagellin C-terminus domain protein [Brevundimonas sp.
BAL3]
gi|196187317|gb|EDX82293.1| Bacterial flagellin C-terminus domain protein [Brevundimonas sp.
BAL3]
Length = 247
Score = 84.0 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 59/89 (66%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ IDT I T A +G+ S + Q F+ +DA+E GVG LVDAD+A ES +L
Sbjct: 159 ATTAKIDTAISTVTGALSTLGTQSKSLGRQITFVNKYQDALEAGVGNLVDADLAKESAKL 218
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
+ALQT+QQL VQALSI N+++ +LSLFR
Sbjct: 219 TALQTKQQLGVQALSIANSASQTLLSLFR 247
Score = 77.1 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 48/208 (23%), Positives = 81/208 (38%), Gaps = 3/208 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI TN+ A A Q L N LE Q+R+++G++VS A D+ A +SIA ++ +
Sbjct: 1 MASINTNYGASIALQNLNKTNSELERTQNRINTGMKVSSAKDSGAIFSIATAQRATAASQ 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQ---SEITQLQS 117
AV + S D+A A + +K + S + +E L
Sbjct: 61 DAVRSGLQRSQSITDVALAAGDTITTALEEMKGLAVSIQASTAGSSAETSYLAEYNALSL 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ G+SF+G N L T LG + + + K+ T+
Sbjct: 121 EITSAISGASFDGVNSLTTPLGVAGVTDVSGGSKARADATTAKIDTAISTVTGALSTLGT 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKD 205
S + G + + ++ L D
Sbjct: 181 QSKSLGRQITFVNKYQDALEAGVGNLVD 208
>gi|90021848|ref|YP_527675.1| flagellin-like protein [Saccharophagus degradans 2-40]
gi|89951448|gb|ABD81463.1| flagellin-like protein [Saccharophagus degradans 2-40]
Length = 532
Score = 84.0 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 21/255 (8%), Positives = 69/255 (27%), Gaps = 4/255 (1%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
A+ + D N + Q+++S+G RVS +D+ + + + ++ L
Sbjct: 11 IANSGMADANQAMVKTQEQLSTGKRVSTPSDDPVASTKIIQLTEELANINQYGINSDLAE 70
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERG----TDSKSIQSEITQLQSQLRDIARGSS 127
+ + + ++ + +++ ++ T+ K++ +E+ +L+ +
Sbjct: 71 NSIVLQESALEAINNLIVRMQELAVQAGNNATLGPTEYKALAAEVDSRLEELQSLLNTKG 130
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
G+ ++ + G D G+ + + +
Sbjct: 131 PGGDYIFGGYRSTTEPFSGTASTGFSYNGDEGQKFVKIANNTHIAASDSGKKIFVDIPSA 190
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
R + + + ++ +
Sbjct: 191 ENTVRTYPSSNNRSSPPVEVSVGQVFDQEAYDEFYPEDIVISFNHESTVVPAGKNYTATE 250
Query: 248 IPVPLPAAPAAPNTT 262
P +
Sbjct: 251 RSTGKVIVANQPFRS 265
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 5/88 (5%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ + + ++G+ + I + K + L D D A +TRL
Sbjct: 447 STLKNLSNAQTSISNVTSELGARYNTIDSTRSLHLDSEVVINKFLADLRDVDYAEAATRL 506
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLF 450
S Q A + V+ L+LF
Sbjct: 507 SVETLVLQAAQSSFVRVSQ-----LTLF 529
>gi|167647608|ref|YP_001685271.1| flagellin domain-containing protein [Caulobacter sp. K31]
gi|167350038|gb|ABZ72773.1| flagellin domain protein [Caulobacter sp. K31]
Length = 273
Score = 84.0 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 48/210 (22%), Positives = 82/210 (39%), Gaps = 3/210 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN AM A Q L N L VVQ R+++G +V +A DN A W++A+ S +L++
Sbjct: 5 SINTNSGAMIALQNLNSTNSELGVVQQRINTGKKVGNAKDNGAIWAMAKNQSSTASSLNS 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQL 119
V D++ G S +D+A A D++ +K K A + ++ S + + L+ Q+
Sbjct: 65 VKDSLQRGQSTIDVALAAGDTVTDLLGKMKEKALAASDTSLNTASFNALKSDFNSLRDQI 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ FNG + T G + + +
Sbjct: 125 TKAVTNAKFNGVSIADGSTTKLTFLANSDGSGFTVSAKTISLVGLGMTATSSFTDAATAK 184
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ T L +K+ +D
Sbjct: 185 TMITTVANALGTATNKLASLGTSSTGLDTH 214
Score = 79.8 bits (194), Expect = 9e-13, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 69/138 (50%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++L T ++ + + M++ + +
Sbjct: 136 VSIADGSTTKLTFLANSDGSGFTVSAKTISLVGLGMTATSSFTDAATAKTMITTVANALG 195
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
AT +G+ S+ + F+ ++D+++ GVG LVDAD+A ES +L +LQT+QQL +
Sbjct: 196 TATNKLASLGTSSTGLDTHLTFVGKLQDSLDAGVGNLVDADLAKESAKLQSLQTKQQLGI 255
Query: 434 QALSIVNNSTARILSLFR 451
QALSI N S++ ILSLFR
Sbjct: 256 QALSIANQSSSSILSLFR 273
>gi|89214322|gb|ABD64473.1| flagellin [Bacillus thuringiensis serovar finitimus]
Length = 219
Score = 84.0 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 47/144 (32%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + + S + A+A + +V+
Sbjct: 1 EHLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNVL 60
Query: 89 STIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ +E L Q+ I ++FN + T
Sbjct: 61 QRMRDVAVQSANGTNLNKNRDSLNNEFQSLTEQIGYIDETTAFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNVTKHISPSPTQHDINIST 144
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 64/218 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANVAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNVLQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + + T T + + + L
Sbjct: 62 RMRDVAVQSANGTNLNKNRDSLNNEFQSLTEQIGYIDETTAFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ ++ + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNVTKHISPSPTQHDINISTEQEARAAIRKIEEALQNVSLYRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSTALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|3608498|gb|AAC35988.1| flagellin FljL [Caulobacter crescentus CB15]
Length = 273
Score = 84.0 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 85/210 (40%), Gaps = 3/210 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN A+ A Q L N L Q R+++G +V++A DN A WS+A++ + +L++
Sbjct: 4 SINTNPGALVALQNLNSTNTELAATQGRINTGKKVANAKDNGAIWSMAKMQSATASSLNS 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQ---SEITQLQSQL 119
V D++ G S +D+A A D+++ +K K A + ++ S ++ L+ QL
Sbjct: 64 VKDSLQRGQSTIDVALAAGDTITDLLTKMKEKALAASDTSLNTASFNALKADFESLRDQL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ A + FNG + + + + + +
Sbjct: 124 QKAATNAKFNGVSLADGSTTKLSFLANEDGSNFTVTAQTLSLTGIGLTATSTFTDAATAK 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ T L +K+ +D
Sbjct: 184 TMIATITTSLQTATNKLSSLGTSSVGLDTH 213
Score = 80.2 bits (195), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 69/139 (49%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + + ++L T + + + M++ I T ++
Sbjct: 135 VSLADGSTTKLSFLANEDGSNFTVTAQTLSLTGIGLTATSTFTDAATAKTMIATITTSLQ 194
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
AT +G+ S + F+ ++D+++ GVG LVDAD+A ES +L +LQT+QQL V
Sbjct: 195 TATNKLSSLGTSSVGLDTHLTFVGKLQDSLDAGVGNLVDADLAKESAKLQSLQTKQQLGV 254
Query: 434 QALSIVNNSTARILSLFRG 452
QALSI N + ILSLF+G
Sbjct: 255 QALSIANQTPQTILSLFKG 273
>gi|89214254|gb|ABD64439.1| flagellin [Bacillus thuringiensis serovar medellin]
Length = 219
Score = 84.0 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ ++G +++ A+DN A +I M + + S + A+A + I+++
Sbjct: 1 EHFATGKKLNHASDNPANITIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVINIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSSNGTNSNANRHSLNKEFQSLTEQIGYIGETTKFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IGHTINMTKHIPPSPTQHDIKIST 144
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 63/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + +
Sbjct: 2 HFATGKKLNHASDNPANITIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVINILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++ A + T T + + + L
Sbjct: 62 RMRDLAVQSSNGTNSNANRHSLNKEFQSLTEQIGYIGETTKFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTINMTKHIPPSPTQHDIKISTEQEARAAIRKIEEALQSVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|163744340|ref|ZP_02151700.1| putative flagellin protein [Oceanibulbus indolifex HEL-45]
gi|161381158|gb|EDQ05567.1| putative flagellin protein [Oceanibulbus indolifex HEL-45]
Length = 309
Score = 84.0 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 47/133 (35%), Positives = 83/133 (62%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SI TN+SAM+A LR +N +L Q+R+S+GL+VS DNAAY++I++ MK D+G
Sbjct: 1 MSSINTNNSAMNALATLRGVNSSLNETQNRISTGLKVSSGKDNAAYFAISETMKGDSGMT 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV++++ L + V A+ G + D+ + ++K+ E I++++T+L + +
Sbjct: 61 KAVNESLTLTKNSVATARLGAEQFSDLATEFRDKVAFAQENQGGLDEIEADLTRLVADMT 120
Query: 121 DIARGSSFNGENW 133
I S+FNG++
Sbjct: 121 AIMEQSTFNGDDL 133
Score = 64.4 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 55/97 (56%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +++ DT + AA +G I Q++F+ + D ++ GVG +VDA+
Sbjct: 213 ATGDTYLSTVLAASDTAAQATVDAATSLGQSEKSIERQQEFLTKLSDNLDAGVGAMVDAN 272
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
M E+ RL ALQ QQQLA Q+LSI N + ILSLFR
Sbjct: 273 MEEEAARLQALQVQQQLASQSLSIANQAPQNILSLFR 309
>gi|126462477|ref|YP_001043591.1| flagellar hook-associated protein 3 [Rhodobacter sphaeroides ATCC
17029]
gi|126104141|gb|ABN76819.1| flagellar hook-associated protein 3 [Rhodobacter sphaeroides ATCC
17029]
Length = 409
Score = 84.0 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 49/444 (11%), Positives = 110/444 (24%), Gaps = 47/444 (10%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT + T A AS+ + + +Q R++S +R + + K L
Sbjct: 1 MT-LGTTLFATLASRNFSRLQTEIGTLQARIASEVRDPRPSADPTRAVQLSAAKEMEATL 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ ++ A + + M +K+ + ++ +
Sbjct: 60 GRYGANASSAADRLAHADVALGEVAARMRELKDVVLQAGNPTLSDEGRAGLRIVAESARE 119
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
L +A G+
Sbjct: 120 ALFALANRKDAMGQGLFAGYAAGPAFVKEG------------------------DTVRFA 155
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + R +V + S + +
Sbjct: 156 GNDGQPVAQLSETLRVATSLGGAEVFMAVPTEAGPRSVFDLADDLVATLSVPLAHSSPQR 215
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ + A ++ +P+ +G+ +I R
Sbjct: 216 SAEDAARLSLAA------------------PPAPATVRFTLTGPVGSVEIEQRLPGSALA 257
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + V + + + D+ + D + T
Sbjct: 258 AINAASAQTGVTATEEPDGTLVLGAVGRITVSDMSRSDDPRDVLATFTSADDKGGWIMPA 317
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ + D + + G++++ + Q D I+ + + +G L D D+A
Sbjct: 318 RFDAASLTDAFDAAVSHMAEQRARAGALAASVDTQADAIRTRQTRIATAIGGLEDLDVAE 377
Query: 418 ESTRLSALQTQQQLAVQAL-SIVN 440
TRL L Q+ A Q I N
Sbjct: 378 AVTRLQQLLLTQEAAQQTYVKIAN 401
>gi|37654962|gb|AAQ96736.1| flagellin [Burkholderia multivorans]
Length = 470
Score = 83.6 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 3/199 (1%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
R+SSG R++ AAD+AA +IA M++ L+ G S + A +G+S+
Sbjct: 1 ITRLSSGKRINSAADDAAGLAIATRMQTQINGLNQGVSNANDGVSMIQTASSGLSQITSS 60
Query: 88 MSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ I+ G +D +++Q+E+TQ +++ IA +++NG+N L G+ +
Sbjct: 61 LQRIRQLAVQASSGSLSSSDQQALQTEVTQQIAEVNRIASQTNYNGKNLLDGSAGNVSFQ 120
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ +V + + + +I L L + + + +
Sbjct: 121 VGANVGQTIGLNLTQSLSAASIGKGLVSSGSTLGTLNNLNIDSATGGVYNAATSTGYQVT 180
Query: 205 DIDVSVYDASGTISTKKFK 223
I+V G T +
Sbjct: 181 SINVLADGKGGFTFTDQNN 199
Score = 56.3 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 29/89 (32%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
S+ T N+ + + ID + +G+ +R +
Sbjct: 377 SSINTTNVPTTVANIDISTAAGANLAMESIDNALATVNNMQANLGAAQNRFTAISTTQQA 436
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQT 427
+ + ++ DA+ A E+ LS Q
Sbjct: 437 QSTNLSQAQSQIQDANFAQETANLSKAQV 465
>gi|162532606|gb|ABY16706.1| FlaA [Arcobacter butzleri]
Length = 307
Score = 83.6 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + N ++ +++S+GLRV+ AAD+A+ +IA +++ +++
Sbjct: 3 INTNLSSLTAQEAASNTNKSITNSLEKLSTGLRVNKAADDASGLAIADKLRTQATSINQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ + I M++ ++ TIK K+ T +I +IT+L QL
Sbjct: 63 IANGNSAVALLQITDKSMAEQSSILDTIKAKLIQANTDTTSVAGRTAIAKDITKLLQQLN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTAS 144
+I +++NG N L+ ++ AS
Sbjct: 123 NIGEQTNYNGTNLLQNARTTADAS 146
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 36/111 (32%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
++ A T + + ID I G IGS ++I +
Sbjct: 197 GAKMSAGATAGTTGVFTRTMAQSGQKAIDKAITTLNGYRGDIGSTQNQIESAIRNLSTQA 256
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + D D A ES + L Q A+S N +L L +
Sbjct: 257 TNIKNAESVIRDVDYAQESANFNKLNIIAQSGSYAISQANAVQQNVLKLLQ 307
>gi|42522142|ref|NP_967522.1| FgL, flagellar protein [Bdellovibrio bacteriovorus HD100]
gi|39574673|emb|CAE78515.1| FgL, flagellar protein [Bdellovibrio bacteriovorus HD100]
Length = 361
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 17/161 (10%), Positives = 55/161 (34%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
S +Q L ++ +Q++ ++ R++ +D+ + +++ + I
Sbjct: 7 MSFNQVNQNLTKNRSDMADLQNQAATQKRINKPSDDPLASARVLTARTEERGNTQFIKNI 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSS 127
S ++ + +S+ +++ K + + ++ + Q+ + +
Sbjct: 67 NNARSFLEFSDQSLSELTEILVRAKELAVSQSNDASGNEESRMVTASEIEQIYNQSIQIG 126
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
G T + + G + +D+ T D
Sbjct: 127 NRKLGERYIFGGQKTQTTPFNQSGEYFGNDSDMKIQTQKDS 167
Score = 41.7 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 26/60 (43%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
N+K ++E + +D I A ++GS ++ D ++ + +L DAD
Sbjct: 267 TNDKAGVQESLDTLDQAISQVVLARSEVGSRIMAVNNTNDSLQKAVVDNKVTASQLEDAD 326
>gi|157363534|ref|YP_001470301.1| flagellar hook-associated protein 3 [Thermotoga lettingae TMO]
gi|157314138|gb|ABV33237.1| flagellar hook-associated protein 3 [Thermotoga lettingae TMO]
Length = 296
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 3/116 (2%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
++ ++ D++SSGL+V +D+A + +KS L I +
Sbjct: 13 LTNIQKNINSIAKFHDQLSSGLKVRYPSDDAVTATRTSNLKSRLRELEQYERNIDHAENI 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGS 126
++ + + + ++ IT G K+I E+ Q++ QL IA
Sbjct: 73 LNSYDTSLQEISSIYQRLRELITQGANGILTDEQRKAISQEVKQIKEQLIQIANTQ 128
Score = 37.8 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ +D + KIG+ + + I+ + + + + + DAD+ L+
Sbjct: 211 SLMSMDYLEDTVSKGLAKIGADQRMVEMISTRIEDLNTFMTEYISKETDADITEV---LT 267
Query: 424 ALQTQQQLAVQAL-SIVN 440
L T Q AL S N
Sbjct: 268 KLSTHQAALTAALKSAAN 285
>gi|52082075|ref|YP_080866.1| flagellar hook-associated protein FlgL [Bacillus licheniformis ATCC
14580]
gi|52787464|ref|YP_093293.1| flagellar hook-associated protein FlgL [Bacillus licheniformis ATCC
14580]
gi|319647942|ref|ZP_08002160.1| FlgL protein [Bacillus sp. BT1B_CT2]
gi|52005286|gb|AAU25228.1| flagellar hook-associated protein 3 [Bacillus licheniformis ATCC
14580]
gi|52349966|gb|AAU42600.1| FlgL [Bacillus licheniformis ATCC 14580]
gi|317390283|gb|EFV71092.1| FlgL protein [Bacillus sp. BT1B_CT2]
Length = 303
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 22/169 (13%), Positives = 61/169 (36%), Gaps = 3/169 (1%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
A ++ + + L+ +Q ++SSG +++ A+D+ + + +
Sbjct: 7 MIAKNSLRYINSSYGKLDKLQSQISSGKKITKASDDPVVAMKSLKYNTQLSQVKQYQSNA 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIAR 124
+ ++ + +++ ID+M+ I+ + + EI QL+ QL IA
Sbjct: 67 SQAFTWLENTETNITEGIDIMAKIRELTVKAQNSTNGKDELNAIGVEIGQLKDQLIQIAN 126
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE 173
+ T+ + + ++ ++ I+ +
Sbjct: 127 TQVNGRYLFNGTNSDVAPITKNADGTYTYNFENYTSSSDVLINVSPNAT 175
Score = 49.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 46/165 (27%)
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ + Y+ G + T T + N T + + + +
Sbjct: 125 ANTQVNGRYLFNGTNSDVAPITKNADGTYTYNFENYTSSSDVLINVSPNATLNVNSNPIS 184
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
S V I N ME +S ID + IG+ +R+
Sbjct: 185 AFGGQSSSGQNVFEMIESLENALKAGTMEGMENALSDIDQFSNQMSNERSDIGARYNRLE 244
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
L + + K + D ++ T Q+ + A+
Sbjct: 245 LINARLSEQEETATKVLSDNEDVELEEIITEFITQQSVHRAALAV 289
>gi|119952980|ref|YP_945189.1| flagellar hook-associated protein FlgL [Borrelia turicatae 91E135]
gi|119861751|gb|AAX17519.1| flagellar hook-associated protein 3 [Borrelia turicatae 91E135]
Length = 424
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 39/404 (9%), Positives = 101/404 (25%), Gaps = 29/404 (7%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G R+++ D+ + A + SD L+ I K+ + + ++++ K
Sbjct: 36 GKRITNLRDDPTGVTHAIRLDSDIFKLNTYVKNINSAKGKLRYMEGYLQSLANILTRAKE 95
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
G + + ++ I + +
Sbjct: 96 ITVQGASGTYKTDDKKIIA----KEINAILEDVLAIAN---VKGADGYSIFAGTKIDNEA 148
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ + + V +D + + E+ + I + +
Sbjct: 149 FKVIRENRINKLTQDKAETQIVRIDYNGNQAEQTTEIYNGIYIPTNYPGSEIFFSHNHYI 208
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + + F + + ++ A I + + A T +
Sbjct: 209 TSSKNVNGFIVKENTKIYIDNIEIALTAGDTAADIIAKINESSAPVEATLDRILNS---- 264
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ T
Sbjct: 265 ----------------MVIQTTIPHQIWITEEEGSTVLKELGILTQNNETKEPPYNIANN 308
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
++ I N + E++ ++ ID + A +G+ +R+
Sbjct: 309 TEVRNRTIFDSLIELRDNLEENREEIIGSRGLAEIDASLNKIFATLADLGTKENRLDRSY 368
Query: 394 DFIKLMRDAVEKGVGRLVDADMASEST--RLSALQTQQQLAVQA 435
+ I ++ + + D D+ T +++L Q L V A
Sbjct: 369 ERISKEIMDMKDDMVKYTDLDVTKAITELNMTSLAYQVSLGVSA 412
>gi|163856442|ref|YP_001630740.1| flagellar hook-associated protein 3 [Bordetella petrii DSM 12804]
gi|163260170|emb|CAP42472.1| flagellar hook-associated protein 3 [Bordetella petrii]
Length = 405
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 47/437 (10%), Positives = 118/437 (27%), Gaps = 47/437 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + + L +Q++++SG RV AD+ S+A + + +
Sbjct: 3 LSTALIYQNGLNGILKQESTLSRLQEQLASGRRVLTPADDPLAASLAVNVSQTSSMNATY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG--VERGTDSKSIQSEITQLQSQLRD 121
+ + + +S + + ++ ++ D +++ +E+ + QL
Sbjct: 63 ASNRNTAKQTLGLESNALSSVVTTLQSVLQRVVQAGGTLSDPDRQALVTELEASRDQLVG 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+A + NG+ G S + DNG+ I + ++
Sbjct: 123 LANSTDGNGQYLFSGHQGFSAPVTLDADGNVSYGGDNGQRLIQVDQSRQMAGSDVISDIF 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ + VS +G+ + + F + + +
Sbjct: 183 GKASAGSKAYIVEANEANTGTGQFSSVSFDTTTGSGANQDFIVTFSDVGGVLHYTTDTVP 242
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ T P + SG + + + + N D++
Sbjct: 243 SSAPVTAPYVEGQTIDLGGISFSVSGQPAVGDSYTIETPKASNMDMFETLD--------- 293
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
T + A+
Sbjct: 294 ------------------------------------TLIDTLGRSTTNDPAAVAAINNAL 317
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ + +G+ + + + + K + L D D+ S ++
Sbjct: 318 ATANKKLNLTLDNVLTVQASVGARLNELDALDAVGSQRTLSYTKQLSNLEDVDVYSVTSE 377
Query: 422 LSALQTQQQLAVQALSI 438
L + A + SI
Sbjct: 378 LLLRKVALDAASSSFSI 394
>gi|89214272|gb|ABD64448.1| flagellin [Bacillus thuringiensis serovar argentinensis]
Length = 219
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 44/144 (30%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++ DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNNTPDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L ++ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNKNRHSLNKEFQSLTEKIGYIGETTEFNDLSVFEGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IGHTINMMKHIPPSPTQHDIKIST 144
Score = 68.2 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/218 (10%), Positives = 60/218 (27%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNNTPDNPANIAIVTRMHARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNKNRHSLNKEFQSLTEKIGYIGETTEFNDLSVFEGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ M + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTINMMKHIPPSPTQHDIKISTEQEARAAILKIEDALQSVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ + DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASLIEDADMAQEMSDFLKFKLLTEVA 219
>gi|16125045|ref|NP_419609.1| flagellin FljM [Caulobacter crescentus CB15]
gi|221233771|ref|YP_002516207.1| flagellin [Caulobacter crescentus NA1000]
gi|6225370|sp|O52529|FLJM_CAUCR RecName: Full=Flagellin fljM
gi|2766244|gb|AAB95380.1| FljM flagellin [Caulobacter crescentus CB15]
gi|13422035|gb|AAK22777.1| flagellin FljM [Caulobacter crescentus CB15]
gi|220962943|gb|ACL94299.1| flagellin [Caulobacter crescentus NA1000]
Length = 273
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 82/210 (39%), Gaps = 3/210 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN A+ A Q L N L VQ R+++G ++ A DN A W+ A+ + G+++A
Sbjct: 5 SINTNSGALIALQNLNSTNAELTQVQQRINTGKKIGSAKDNGAIWATAKNQSATAGSMNA 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQL 119
V D++ G S +D+A A D++ +K K A + ++ S + + L+ Q+
Sbjct: 65 VKDSLQRGQSTIDVALAAGDTITDLLGKMKEKALAASDTSLNTASFNALKSDFDSLRDQI 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
A + FNG + + + + + T
Sbjct: 125 TKAASNAKFNGVSIADGTTTKLSFLANSDGSAFTVTAKTLTLGGLGLTATSSFTTAAAAK 184
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ GT L +K+ +D
Sbjct: 185 TMIGTIDTALQTATNKLASLGTSSTGLDTH 214
Score = 79.8 bits (194), Expect = 8e-13, Method: Composition-based stats.
Identities = 47/138 (34%), Positives = 71/138 (51%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T + +TL T ++ A + M+ IDT ++
Sbjct: 136 VSIADGTTTKLSFLANSDGSAFTVTAKTLTLGGLGLTATSSFTTAAAAKTMIGTIDTALQ 195
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
AT +G+ S+ + F+ ++D+++ GVG LVDAD+A ES +L +LQT+QQL V
Sbjct: 196 TATNKLASLGTSSTGLDTHLTFVGKLQDSLDAGVGNLVDADLAKESAKLQSLQTKQQLGV 255
Query: 434 QALSIVNNSTARILSLFR 451
QALSI N S++ ILSLFR
Sbjct: 256 QALSIANQSSSSILSLFR 273
>gi|302390138|ref|YP_003825959.1| flagellar hook-associated protein 3 [Thermosediminibacter oceani
DSM 16646]
gi|302200766|gb|ADL08336.1| flagellar hook-associated protein 3 [Thermosediminibacter oceani
DSM 16646]
Length = 294
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 47/137 (34%), Gaps = 3/137 (2%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ L L +D ++SG +V +D+ ++A ++ + + + +
Sbjct: 14 RNLSQNLRRLGKKEDMLASGKKVRLPSDDPVSATLAMRLRDTLLTVEQYTKNTEDAITWL 73
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGE 131
+ ++ +++ I+ + + + EITQL+ QL A S
Sbjct: 74 KSTETALANTGEILQRIRELTVYAANDTLSAEEREMVLDEITQLKHQLLQEANASHNKKY 133
Query: 132 NWLRTDLGSSTASIAKS 148
+ + I
Sbjct: 134 LFNGYHTDQAPFYIDAM 150
Score = 50.5 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 22/58 (37%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ +D I +IG+ +R+ + ++ + + + D D+A L
Sbjct: 210 LDQLDNAIDTVLKYRSQIGARINRLEATKTRLEYNNIDYTELLSKTEDVDVAKLIMDL 267
>gi|162532601|gb|ABY16702.1| FlaA [Arcobacter butzleri]
Length = 307
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S+++A + + N ++ +++S+GLRV+ AAD+A+ +IA +++ +++
Sbjct: 3 INTNVSSLTAQEAASNTNKSITNSLEKLSTGLRVNKAADDASGLAIADKLRTQATSINQG 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ + I M++ ++ TIK K+ T +I +IT+L QL
Sbjct: 63 IANGNSAVALLQITDKSMAEQSSILDTIKAKLIQANTDTTSVAGRTAIAKDITKLLQQLN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTAS 144
+I +++NG N L+ ++ AS
Sbjct: 123 NIGEQTNYNGTNLLQNARTTADAS 146
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 36/111 (32%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
++ A T + + ID I G IGS ++I +
Sbjct: 197 GAKMSAGATAGTTGVFTRTMAQSGQQAIDKAITTLNGYRGDIGSTQNQIESAIRNLSTQA 256
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ + D D A ES + L Q A+S N +L L +
Sbjct: 257 TNIKNAESVIRDVDYAQESANFNKLNIISQAGSYAISQANAVQQNVLKLLQ 307
>gi|332798815|ref|YP_004460314.1| flagellar hook-associated protein 3 [Tepidanaerobacter sp. Re1]
gi|332696550|gb|AEE91007.1| flagellar hook-associated protein 3 [Tepidanaerobacter sp. Re1]
Length = 296
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 21/191 (10%), Positives = 55/191 (28%), Gaps = 3/191 (1%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ L L V D++ S + +D+ ++A ++ A+ + + +
Sbjct: 14 RNLMQNLKRLSDVTDKILSEKNIRRPSDDPVGVAMAIKLRRQIAAIQQYNSNAQDALTWM 73
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGE 131
+ ++ DV+ + D + I E+ +L+ QL A +S +
Sbjct: 74 KDTETALTNTGDVLQRLDELTVQVANGTLTPDDREKILYEVKELKDQLFQEANSTSLDRY 133
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
+ D I + ++ L ++ + ++
Sbjct: 134 LFGGYSTNKPPFIKNDITGEIEKNPDTFNGAIEYDLGQSERISINLTGYDVFSDIFKAVE 193
Query: 192 RNHKIKVEPQV 202
Sbjct: 194 NLETAIEADDT 204
Score = 51.7 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/282 (7%), Positives = 63/282 (22%)
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+R + + L D + + + +K
Sbjct: 1 MRVTQSMISENFTRNLMQNLKRLSDVTDKILSEKNIRRPSDDPVGVAMAIKLRRQIAAIQ 60
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + Q T+ V +
Sbjct: 61 QYNSNAQDALTWMKDTETALTNTGDVLQRLDELTVQVANGTLTPDDREKILYEVKELKDQ 120
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ ++ +T T + ++ + +
Sbjct: 121 LFQEANSTSLDRYLFGGYSTNKPPFIKNDITGEIEKNPDTFNGAIEYDLGQSERISINLT 180
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
D + +A + + ++++ I +IG+ S+R+
Sbjct: 181 GYDVFSDIFKAVENLETAIEADDTEALSGQVLADIKNATSTVLKYRAQIGARSNRLEATV 240
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ + + + D D+A T L ++ + ++
Sbjct: 241 LRLDANEVDYKAQLSNIEDIDLAQMITDLKMEESVYRASLSV 282
>gi|182418335|ref|ZP_02949630.1| flagellin [Clostridium butyricum 5521]
gi|237666745|ref|ZP_04526730.1| flagellin domain protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377717|gb|EDT75261.1| flagellin [Clostridium butyricum 5521]
gi|237657944|gb|EEP55499.1| flagellin [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 284
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 55/136 (40%), Gaps = 3/136 (2%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N +M+ + + + +S+G++++ A DN + + +K A +A
Sbjct: 5 HNMYSMNILKNYKSTLVDNSKALCNISTGIKLNSAKDNPNKIAQSDNLKLQILARNAAQS 64
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLRDI 122
I SS + + + + +S + + D + IQ EI Q+ + D+
Sbjct: 65 NIQDTSSMIQTFDGALQEINNNVSRLTELTVRAASETNNDGDREIIQKEINQILKGIDDL 124
Query: 123 ARGSSFNGENWLRTDL 138
A +SFNG R +
Sbjct: 125 ANNTSFNGICLSRDNA 140
Score = 76.7 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 35/96 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
K + + + + K G+I SR+ + + + + K ++ D+D
Sbjct: 185 VTTKDNASKSIEKVKEATNIVSRIRSKYGAIQSRLDETYSSMDDINENLSKAQSKIADSD 244
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+A E + Q ++ ++ N L++
Sbjct: 245 IAEEMLNYARTNILYQSSISLMAQSNKFPQDALNIL 280
>gi|18075623|emb|CAD11207.1| flagellin A [Helicobacter pylori]
Length = 458
Score = 83.6 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 54/458 (11%), Positives = 123/458 (26%), Gaps = 58/458 (12%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
GLR++ AAD+A+ ++A ++S +L G + +A M + + ++ T+K
Sbjct: 1 GLRINKAADDASGMTVADSLRSQASSLGQAIANTNDGMGIIQVADKAMDEQLKILDTVKV 60
Query: 94 KITAGV---ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVI 150
K T + K+IQS+I +L L +I +++NG+ L + +
Sbjct: 61 KATQAAQDGQTTESRKAIQSDIVRLIQGLDNIGNTTTYNGQALLSGQFTNKEFQVGAYSN 120
Query: 151 GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
S + ++ S + N +V +
Sbjct: 121 QSIKASIGSTTSDKIGQVRIATGALITASGDISLTFKQVDGVNDVTLESVKVSSSAGTGI 180
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
+ I+ + + A + + Q+ ++ + + + S +
Sbjct: 181 GVLAEVINKNSNRTGVKAYASVITTSDVAVQSGSLSNLTLNGIHLGNIADIKKNDSDGRL 240
Query: 271 PSVAASATYIRMG----------------------------------NSDIWVRATTKNS 296
+ + T + TK S
Sbjct: 241 VAAINAVTSETGVEAYTDQKGRLNLRSLDGRGIEIKTDSVSNGPSALTMVNGGQDLTKGS 300
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
AK N D++ + ++ +
Sbjct: 301 TNYGRLSLTRLDAKSINVVSASDSQHLGFTAIGFGESQVAETTVNLRDVTGNFNANVKSA 360
Query: 357 EKLAMEEMVSFIDTQIKC-ATAAAGKI------GSISSRIHLQEDFIKLMRDAVEKGVGR 409
+++ + + T G + S + + +++ + V
Sbjct: 361 SGANYNAVIASGNQSLGSGVTTLRGAMVVIDIAESAMKMLDKVRSDLGSVQNQMISTVNN 420
Query: 410 L--------------VDADMASESTRLSALQTQQQLAV 433
+ D D A ES + Q
Sbjct: 421 ISITQVNVKAAESQIRDVDFAEESANFNKNNILAQSGS 458
>gi|16125709|ref|NP_420273.1| flagellin FljL [Caulobacter crescentus CB15]
gi|221234464|ref|YP_002516900.1| flagellin FljL [Caulobacter crescentus NA1000]
gi|13637784|sp|P18914|FLJL_CAUCR RecName: Full=Flagellin fljL; AltName: Full=27 kDa flagellin
gi|13422829|gb|AAK23441.1| flagellin FljL [Caulobacter crescentus CB15]
gi|220963636|gb|ACL94992.1| flagellin fljL [Caulobacter crescentus NA1000]
Length = 273
Score = 83.6 bits (204), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 85/210 (40%), Gaps = 3/210 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN A+ A Q L N L Q R+++G +V++A DN A WS+A++ + +L++
Sbjct: 4 SINTNPGALLALQNLNSTNTELAATQGRINTGKKVANAKDNGAIWSMAKMQSATASSLNS 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQ---SEITQLQSQL 119
V D++ G S +D+A A D+++ +K K A + ++ S ++ L+ QL
Sbjct: 64 VKDSLQRGQSTIDVALAAGDTITDLLTKMKEKALAASDTSLNTASFNALKADFESLRDQL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ A + FNG + + + + + +
Sbjct: 124 QKAATNAKFNGVSLADGSTTKLSFLANEDGSNFTVTAQTLSLTGIGLTATSTFTDAATAK 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ T L +K+ +D
Sbjct: 184 TMIATITTSLQTATNKLSSLGTSSVGLDTH 213
Score = 80.2 bits (195), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 69/139 (49%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + + ++L T + + + M++ I T ++
Sbjct: 135 VSLADGSTTKLSFLANEDGSNFTVTAQTLSLTGIGLTATSTFTDAATAKTMIATITTSLQ 194
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
AT +G+ S + F+ ++D+++ GVG LVDAD+A ES +L +LQT+QQL V
Sbjct: 195 TATNKLSSLGTSSVGLDTHLTFVGKLQDSLDAGVGNLVDADLAKESAKLQSLQTKQQLGV 254
Query: 434 QALSIVNNSTARILSLFRG 452
QALSI N + ILSLF+G
Sbjct: 255 QALSIANQTPQTILSLFKG 273
>gi|329890215|ref|ZP_08268558.1| flagellin fljK [Brevundimonas diminuta ATCC 11568]
gi|328845516|gb|EGF95080.1| flagellin fljK [Brevundimonas diminuta ATCC 11568]
Length = 267
Score = 83.6 bits (204), Expect = 7e-14, Method: Composition-based stats.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN A+ A Q L N +L V Q+RV++GL+VS A DN A ++IA +++ GAL +
Sbjct: 4 SINTNAGALIALQNLNATNRDLNVTQNRVNTGLKVSTAKDNGAIFAIATSQRAEMGALDS 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG-TDSKSIQSEITQLQSQLRD 121
V +I G S VD+A A + K A + ++ L +++
Sbjct: 64 VKQSIQRGQSIVDVALAAGEIVTKALEEQKGLAVAIASSTGAAQTAYLADFNALGNEITK 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
G+SF+G N + +
Sbjct: 124 ALGGASFDGVNLFSANTDAVEVRTGT 149
Score = 75.9 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/80 (52%), Positives = 56/80 (70%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I TA G +G+ S + Q F+ M+D++E G+G LVDAD+A ES RL+ALQT+QQL
Sbjct: 188 ITAFTAVLGDLGTKSKSMDRQLTFVSKMQDSLEVGIGNLVDADLAKESARLTALQTKQQL 247
Query: 432 AVQALSIVNNSTARILSLFR 451
VQALSI N S++ +L LFR
Sbjct: 248 GVQALSIANQSSSILLGLFR 267
>gi|205375050|ref|ZP_03227841.1| flagellar hook-associated protein FlgL [Bacillus coahuilensis m4-4]
Length = 290
Score = 83.6 bits (204), Expect = 7e-14, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 57/142 (40%), Gaps = 3/142 (2%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A ++ + + L +QD++++G +++ +D+ +S+ + +
Sbjct: 9 AGNSLSNISNSYNRLGQIQDQLATGKKITKPSDDPVVAMKGMYYRSNLTQIEQYKRNLSE 68
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGS 126
G ++ +++ + +A + ++ G D K+I +EI Q+ L + A
Sbjct: 69 GYLWLESSESAIEQANQGLQRVRELTVQGQNGTLSDDDKKAISAEIQQIVEDLENTANTK 128
Query: 127 SFNGENWLRTDLGSSTASIAKS 148
+ TD+ S + +
Sbjct: 129 VAGKYLFNGTDVTESPIASSNP 150
Score = 43.2 bits (99), Expect = 0.091, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 28/75 (37%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ +S +D + A ++G+ +RI + E + + + + + +M
Sbjct: 201 DLNNFLSDLDDVMSVMGAERSELGARYNRIEMVEQRLGSQEISATQILSDNENVNMEEAI 260
Query: 420 TRLSALQTQQQLAVQ 434
+ L + A+
Sbjct: 261 SELMMQEAVHNAALS 275
>gi|6996996|gb|AAB95381.2| FljN flagellin [Caulobacter crescentus CB15]
Length = 273
Score = 83.3 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN A+ A Q L N L VQ R+++G ++ A DN A W+ A+ + +++A
Sbjct: 5 SINTNSGALIALQNLNSTNAELTQVQQRINTGKKIGSAKDNGAIWATAKNQSATANSMNA 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQL 119
V D++ G S +D+A A D++ +K K A + ++ +++S+ ++ Q+
Sbjct: 65 VKDSLQRGQSTIDVALAAGDTITDLLGKMKEKALAASDTSLNTAWFNALKSDFDSVRDQI 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR 155
A + FNG + T G +
Sbjct: 125 TKAASNAKFNGVSIANGSTAKLTFLANSDGSGFTVT 160
Score = 66.3 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 71/138 (51%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + +TL + + A + M+ IDT ++
Sbjct: 136 VSIANGSTAKLTFLANSDGSGFTVTAKTLTLTGLGLTASSTFTTAAAAKTMIGTIDTALQ 195
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
AT +G+ S+ + F+ ++D+++ GVG LVDAD+A ES +L +LQT+QQL V
Sbjct: 196 TATNKLASLGTSSTGLDTHLTFVGKLQDSLDAGVGNLVDADLAKESAKLQSLQTKQQLGV 255
Query: 434 QALSIVNNSTARILSLFR 451
QALSI N+S++ ILSLFR
Sbjct: 256 QALSIANSSSSAILSLFR 273
>gi|18075625|emb|CAD11208.1| flagellin A [Helicobacter pylori]
Length = 458
Score = 83.3 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 53/458 (11%), Positives = 122/458 (26%), Gaps = 58/458 (12%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
GLR++ AAD+A+ ++A ++S +L G + +A M + + ++ T+K
Sbjct: 1 GLRINKAADDASGMTVADSLRSQASSLGQAIANTNDGMGIIQVADKAMDEQLKILDTVKV 60
Query: 94 KITAGV---ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVI 150
K T + K+IQS+I +L L +I +++NG+ L + +
Sbjct: 61 KATQAAQDGQTTESRKAIQSDIVRLIQGLDNIGNTTTYNGQALLSGQFTNKEFQVGAYSN 120
Query: 151 GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
S + ++ S + N +V +
Sbjct: 121 QSIKASIGSTTSDKIGQVRIATGALITASGDISLTFKQVDGVNDVTLESVKVSSSAGTGI 180
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
+ I+ + + A + + Q+ ++ + + + S +
Sbjct: 181 GVLAEVINKNSNRTGVKAYASVITTSDVAVQSGSLSNLTLNGIHLGNIADIKKNDSDGRL 240
Query: 271 PSVAASA----------------------------------TYIRMGNSDIWVRATTKNS 296
+ + + TK S
Sbjct: 241 VAAINAVTSETGVEAYTDQKGRLNLRSLDGRGIEIKTDSVSNGPNALTMVNGGQDLTKGS 300
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
AK N D++ + ++ +
Sbjct: 301 TNYGRLSLTRLDAKSINVVSASDSQHLGFTAIGFGESQVAETTVNLRDVTGNFNANVKSA 360
Query: 357 EKLAMEEMVSFIDTQIKC-ATAAAGKI------GSISSRIHLQEDFIKLMRDAVEKGVGR 409
+++ + + T G + S + + +++ + V
Sbjct: 361 SGANYNAVIASGNQSLGSGVTTLRGAMVVIDIAESAMKMLDKVRSDLGSVQNQMISTVNN 420
Query: 410 L--------------VDADMASESTRLSALQTQQQLAV 433
+ D D A ES + Q
Sbjct: 421 ISITQVNVKAAESQIRDVDFAEESANFNKNNILAQSGS 458
>gi|15639646|ref|NP_219096.1| flagellar hook-associated protein FlgL [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189025884|ref|YP_001933656.1| flagellar hook-associated protein FlgL [Treponema pallidum subsp.
pallidum SS14]
gi|3322959|gb|AAC65633.1| flagellar hook-associated protein 3 (flgL) [Treponema pallidum
subsp. pallidum str. Nichols]
gi|189018459|gb|ACD71077.1| flagellar hook-associated protein 3 [Treponema pallidum subsp.
pallidum SS14]
gi|291060026|gb|ADD72761.1| flagellar hook-associated protein 3 [Treponema pallidum subsp.
pallidum str. Chicago]
Length = 416
Score = 83.3 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 40/418 (9%), Positives = 102/418 (24%), Gaps = 35/418 (8%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDI 76
LR+ L V +++++ R+ D+ + KS L + I
Sbjct: 19 LREQESRLRKVNNQLATQRRIQQLRDDPLAAGHSVRYKSSLARLDRFERNTKTLRDQYQI 78
Query: 77 AKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
A+ M+ A++V+ ++ AG ++ ++ L+++ ++ + +R
Sbjct: 79 AEGFMTSALNVVQRLREMAVAGANGTYTPDDLKKMASEADELLQELVHNANAVSADGVRV 138
Query: 137 DLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
G+ + + L S RY +
Sbjct: 139 FSGTKVFT--------------------EPFETVMGNVEGLGSEVITQVRYHGSLDPKNV 178
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
+++ + + + + A+
Sbjct: 179 EIDEHSYVGTH---------------QAGSRVFWAERQILLSSVDARAYVLQQDARVTVD 223
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
+ + + + V + +
Sbjct: 224 GVSIPLVAGDNVYAIISKINDSGAAVRAYLDPVTNGLNMETSDARQLWLQDEDEANVFAS 283
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
SG S+ + I A +++ +++ D + +
Sbjct: 284 LGLITEGQRPPYNVSAGARVSGGSIFDMAIAVRNALLAGDQESLGGKILGSADGAVDNLS 343
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ G+ +R V R D D+ T L + Q +
Sbjct: 344 LRLAETGARYARAQATLARFNSHIPNVVAAESRESDIDLTQAITDLKMFEYTHQATLS 401
>gi|77463645|ref|YP_353149.1| flagellar hook-associated protein 3 FlgL [Rhodobacter sphaeroides
2.4.1]
gi|77388063|gb|ABA79248.1| flagellar hook-associated protein 3 FlgL [Rhodobacter sphaeroides
2.4.1]
Length = 409
Score = 83.3 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 48/444 (10%), Positives = 107/444 (24%), Gaps = 47/444 (10%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT + T A AS+ + + +Q R++S +R + + K L
Sbjct: 1 MT-LGTTLFATLASRNFSRLQTEIGTLQARIASEVRDPRPSADPTRAVQLSAAKEMEATL 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ ++ A + + M +K+ + ++ +
Sbjct: 60 GRYGANASSAADRLAHADVALGEVAARMRELKDVVLQAGNPTLSDEGRAGLRIVAESARE 119
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
L +A G+
Sbjct: 120 ALFALANRKDAMGQGLFAGYAAGPAFVKEG------------------------DAVRFA 155
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + R +V + S + +
Sbjct: 156 GNDGQPVAQLSETLRVATSLGGAEVFMAVPTEAGPRSVFDLADDLVATLSVPLAHSSPQR 215
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ + ++ +P+ G+ +I R
Sbjct: 216 SAEDTARLSLAA------------------PPAPATVRFTLTGPGGSVEIEQRLPGSALA 257
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + V + + + D+ + D + T
Sbjct: 258 AINAASAQTGVTATEEPDGTLVLGAVGRITVSDMSRSDDPRDVLATFTSADDKGGWIMPA 317
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ + D + + G+ ++ + Q D I+ + + +G L D D+A
Sbjct: 318 RFDAASLTDAFDAAVSHMAEQRARAGAFAASVDTQADAIRTRQTRIATAIGGLEDLDVAE 377
Query: 418 ESTRLSALQTQQQLAVQAL-SIVN 440
TRL L Q+ A Q I N
Sbjct: 378 AVTRLQQLLLTQEAAQQTYVKIAN 401
>gi|18075617|emb|CAD11204.1| flagellin A [Helicobacter pylori]
gi|18075619|emb|CAD11205.1| flagellin A [Helicobacter pylori]
gi|18075621|emb|CAD11206.1| flagellin A [Helicobacter pylori]
Length = 458
Score = 83.3 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 54/458 (11%), Positives = 123/458 (26%), Gaps = 58/458 (12%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
GLR++ AAD+A+ ++A ++S +L G + +A M + + ++ T+K
Sbjct: 1 GLRINKAADDASGMTVADSLRSQASSLGQAIANTNDGMGIIQVADKAMDEQLKILDTVKV 60
Query: 94 KITAGV---ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVI 150
K T + K+IQS+I +L L +I +++NG+ L + +
Sbjct: 61 KATQAAQDGQTTESRKAIQSDIVRLIQGLDNIGNTTTYNGQALLSGQFTNKEFQVGAYSN 120
Query: 151 GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
S + ++ S + N +V +
Sbjct: 121 QSIKASIGSTTSDKIGQVRIATGALITASGDISLTFKQVDGVNDVTLESVKVSSSAGTGI 180
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
+ I+ + + A + + Q+ ++ + + + S +
Sbjct: 181 GVLAEVINKNSNRTGVKAYASVITTSDVAVQSGSLSNLTLNGIHLGNIADIKKNDSDGRL 240
Query: 271 PSVAASATYIRMG----------------------------------NSDIWVRATTKNS 296
+ + T + TK S
Sbjct: 241 VAAINAVTSETGVEAYTDQKGRLNLRSIDGRGIEIKTDSVSNGPSALTMVNGGQDLTKGS 300
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
AK N D++ + ++ +
Sbjct: 301 TNYGRLSLTRLDAKSINVVSASDSQHLGFTAIGFGESQVAETTVNLRDVTGNFNANVKSA 360
Query: 357 EKLAMEEMVSFIDTQIKC-ATAAAGKI------GSISSRIHLQEDFIKLMRDAVEKGVGR 409
+++ + + T G + S + + +++ + V
Sbjct: 361 SGANYNAVIASGNQSLGSGVTTLRGAMVVIDIAESAMKMLDKVRSDLGSVQNQMISTVNN 420
Query: 410 L--------------VDADMASESTRLSALQTQQQLAV 433
+ D D A ES + Q
Sbjct: 421 ISITQVNVKAAESQIRDVDFAEESANFNKNNILAQSGS 458
>gi|168187527|ref|ZP_02622162.1| flagellar hook-associated protein 3 [Clostridium botulinum C str.
Eklund]
gi|169294602|gb|EDS76735.1| flagellar hook-associated protein 3 [Clostridium botulinum C str.
Eklund]
Length = 327
Score = 83.3 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 54/139 (38%), Gaps = 1/139 (0%)
Query: 6 TN-HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN + + +R N+ +Q + +SG + +D+ + + + +D S
Sbjct: 4 TNKMLSNNFLADMRTNLENINKIQQQNTSGKKFRKPSDDPFAVARSMQLHTDINTNKQYS 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIAR 124
I S+ +D + +A +V+ ++ + + G ++ ++ ++ ++++
Sbjct: 64 KNITDVSNWLDTTDTALGQAGNVLQRVRELLISSGNGGYTKSERRAIKDEINEKIGEMSQ 123
Query: 125 GSSFNGENWLRTDLGSSTA 143
+ N ST
Sbjct: 124 ILNTNFGGNYIFSGSRSTT 142
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 27/291 (9%), Positives = 77/291 (26%)
Query: 144 SIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
+I K + K + ++ + N + +
Sbjct: 22 NINKIQQQNTSGKKFRKPSDDPFAVARSMQLHTDINTNKQYSKNITDVSNWLDTTDTALG 81
Query: 204 KDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTS 263
+ +V IS+ + +K + + ++
Sbjct: 82 QAGNVLQRVRELLISSGNGGYTKSERRAIKDEINEKIGEMSQILNTNFGGNYIFSGSRST 141
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
T + + T + + + + + +T
Sbjct: 142 TKPMEVEVDKTTGNTKLIYNKKEGGELDKTVDKDEYNQIASKLKIEVSQGVTMDYNVTAT 201
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+ K+ + + +++ +T + D + E ++ I I ++G
Sbjct: 202 DVLEFKNETGDDKNLREILSNIVTHLDSEDPDEINKLIGEDLTNITDSISNVLKIRAEVG 261
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ +RI +D K + K + + D + T + + T ++Q
Sbjct: 262 AKQNRIEGADDRNKDGTFNMTKILSKHEDVNYTENMTDYATMLTVYMASLQ 312
>gi|239995103|ref|ZP_04715627.1| hag; flagellin [Alteromonas macleodii ATCC 27126]
Length = 264
Score = 83.3 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 80/214 (37%), Gaps = 3/214 (1%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDI 76
L + E + ++++SG +++DA D AA I + S+ + + G S +
Sbjct: 11 LSQVQEKQESLMEKLASGKKINDATDGAAAQQIIDRLTSEVEGNRQAINNVYDGISVAQV 70
Query: 77 AKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
A+ G+ D ++ I+ D ++IQSEITQLQ + ++F+G+
Sbjct: 71 AEGGLGSINDDVNRIRELTLQSGNGVLSSGDRRAIQSEITQLQENISQTIEQTNFSGKPL 130
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
L + S + + + + Q+ + ++ + T+ N
Sbjct: 131 LSENGSLEFQSGSSAGQSISVNTQDVAAQLNDVLAIDITSGTSIEDALGATDAAIETLGN 190
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+ + + + ++T + +
Sbjct: 191 ARGDLGATQNRFESAARSLTQANVNTAEARSRIQ 224
Score = 66.3 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 37/96 (38%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++E+ + D I+ A G +G+ +R + + R+ D D
Sbjct: 168 ITSGTSIEDALGATDAAIETLGNARGDLGATQNRFESAARSLTQANVNTAEARSRIQDLD 227
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A ++ ++ Q A+ + N +++LSL
Sbjct: 228 FAQAVSQQASNDVLGQAALTVQAQANQQQSQVLSLL 263
>gi|254418860|ref|ZP_05032584.1| Bacterial flagellin N-terminus domain protein [Brevundimonas sp.
BAL3]
gi|196185037|gb|EDX80013.1| Bacterial flagellin N-terminus domain protein [Brevundimonas sp.
BAL3]
Length = 270
Score = 83.3 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI TN+ A A Q L + LE Q+R+++G++VS A D+ A +SIA +++ A
Sbjct: 1 MASINTNYGAAIALQNLNKTSSELERTQNRINTGMKVSSAKDSGAIFSIATGQRANASAQ 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG-TDSKSIQSEITQLQSQL 119
AV ++ G S VD+A A + +K + S + E L ++
Sbjct: 61 DAVRSSMQRGQSIVDVALAAGDTITSALEEMKGLAVSIAGSTGAAKTSYEDEFKALGVEI 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTAS 144
+ G+SF+G N L T G++T
Sbjct: 121 KSALDGASFDGVNLLTTASGATTTV 145
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 66/138 (47%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ +TT + + L+ + + +D +
Sbjct: 133 NLLTTASGATTTVRTGTGATDTKVLGTAAALSANTDLAKFTAATPAVADFTTANVDLVVT 192
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
T A +G+ S + F ++D++E GVG LVDAD+A ES +L+ALQT+QQL V
Sbjct: 193 AVTGALSTLGTQSKSLGRSISFTNKLQDSIEAGVGNLVDADLAKESAKLTALQTKQQLGV 252
Query: 434 QALSIVNNSTARILSLFR 451
QALSI N+++ +LSLFR
Sbjct: 253 QALSIANSASQTLLSLFR 270
>gi|224370753|ref|YP_002604917.1| putative flagellin [Desulfobacterium autotrophicum HRM2]
gi|223693470|gb|ACN16753.1| putative flagellin [Desulfobacterium autotrophicum HRM2]
Length = 692
Score = 83.3 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 24/175 (13%), Positives = 60/175 (34%), Gaps = 3/175 (1%)
Query: 13 ASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSS 72
A+ +L I NL+ + VS+ R++ +D+ S M ++ L + I +G +
Sbjct: 12 ATYRLGTITSNLQDANEVVSTQKRINSMSDDPIGLSQVMGMNTNLKGLEQFNRNIDMGKT 71
Query: 73 KVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFN 129
+D +A ++ D + +K I ++ + + QL DI +
Sbjct: 72 WLDTGEAALTSTNDSLLELKISIQQLSSAAAGTDQRAAMADNVDNIIKQLVDIGNSQVLD 131
Query: 130 GENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + + + + + + + + V + +
Sbjct: 132 NYIFSGSKISEKPLTFDNELNPTAVVYNGDSNPFSIKTGETSTLEVGRNGAKIFW 186
Score = 47.0 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 32/317 (10%), Positives = 81/317 (25%), Gaps = 2/317 (0%)
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I S N E + + + A +G D + + S
Sbjct: 367 AIRAESGTNLEAFQVNWNSEPSLNSAADALGFTQDDLYPSGGDLSHGVGTSIAPDIGFDS 426
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D + ++ + + + G
Sbjct: 427 VDIRDAVVSDNKVSFDPATLVSDPITITAGDNDEIVFYEDRDDGYGLQGPMAITLTPGVV 486
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
++ + L A T+ S ++V S +
Sbjct: 487 YSETGSPDFTDLANEIEALMETASEDYYPEVSGKIDYEVSFDRGKKVFVIQEEGKSRLKE 546
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + + + +S + TL + + N+
Sbjct: 547 LQFDWTASSSAKALGKDLGFDSKISVHTPPASDDAPEWGVFNTLFDLK--DYLVANDVEG 604
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ +S +D+ + + G + + ++ + + +V + + DAD+
Sbjct: 605 LTRTLSRLDSHMDQVQSYIADSGLKQNNLEIRVNVMSETTLSVTERRSMVEDADIVQSVM 664
Query: 421 RLSALQTQQQLAVQALS 437
L A++T + A+ + S
Sbjct: 665 DLKAIETAYEAALASTS 681
>gi|114765254|ref|ZP_01444386.1| flagellin C protein [Pelagibaca bermudensis HTCC2601]
gi|114542389|gb|EAU45417.1| flagellin C protein [Roseovarius sp. HTCC2601]
Length = 330
Score = 83.3 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 46/207 (22%), Positives = 80/207 (38%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SI TN SAM+A LR IN +LE Q R+S+GL+V DNAAY+ I++ MK D+
Sbjct: 1 MSSINTNASAMNALSTLRQINKDLESTQSRISTGLQVESGKDNAAYFQISETMKGDSSVY 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+++++ + L + V A+ G + +K+ I+S++ +L Q+
Sbjct: 61 ASINEGLTLTKNSVSTARLGAETINGLAQEFLDKVAFAQGATGGHSEIESDLAELVKQME 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
S+FNG++ L + + + D +
Sbjct: 121 TTLSQSTFNGDDMLGAGSYADILAGTGGSTNAVAAVDGTIGTAVVNGDATVGTDRNTVTG 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDID 207
+ L
Sbjct: 181 ISRAGGTYGTTSITVGTHDMASLVAQF 207
Score = 67.5 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 54/97 (55%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ + + T A K+G I Q++F+ + D ++ GVG ++DA+
Sbjct: 234 DTTDNFLATALNTAEGLLGNVTDIATKLGQSEKSIENQQEFLSSVVDNIDAGVGSMIDAN 293
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
M E+ RL ALQ QQQLA Q+LSI N + ILSLFR
Sbjct: 294 MEEEAARLQALQVQQQLATQSLSIANQAPQNILSLFR 330
>gi|221234467|ref|YP_002516903.1| flagellin [Caulobacter crescentus NA1000]
gi|220963639|gb|ACL94995.1| flagellin [Caulobacter crescentus NA1000]
Length = 278
Score = 83.3 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 50/220 (22%), Positives = 93/220 (42%), Gaps = 3/220 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN A+ A Q L N +++ VQ R+++G +S A DNAA WSIAQ ++D AL
Sbjct: 3 LSVNTNQPALIALQNLNRTNDDMQAVQTRINTGEAISTAKDNAAVWSIAQAQRADMSALG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
AV ++ +S D+A A D++ ++ K+ A + T +++ ++ L
Sbjct: 63 AVKMSLDRATSIADVALAAGESVSDLLKLMREKVVAAKDTSLTTTSRQALNADFQGLIKN 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L + R ++F+G N L + + +A + G I + + L +LD
Sbjct: 123 LNQVLRSATFDGANLLDGSQAADMSFLADADAGQAITLTLQNLSLGGTINTLTATDDILD 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
L + + + + ++
Sbjct: 183 PVNAAGVLTRLDATLSAVNQAVGNIGTQAKQIDAHNTFVA 222
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/106 (39%), Positives = 59/106 (55%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
TD + + +++ +D + A G IG+ + +I F+ + D +E G
Sbjct: 172 NTLTATDDILDPVNAAGVLTRLDATLSAVNQAVGNIGTQAKQIDAHNTFVAKLNDVLETG 231
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
VG LVDAD+A ES RL ALQ +QQL QALSI N + ILSLF+G
Sbjct: 232 VGNLVDADLAKESARLQALQVKQQLGAQALSIANGAPQIILSLFKG 277
>gi|307699994|ref|ZP_07637045.1| flagellar hook-associated protein 3 [Mobiluncus mulieris FB024-16]
gi|307615032|gb|EFN94250.1| flagellar hook-associated protein 3 [Mobiluncus mulieris FB024-16]
Length = 336
Score = 83.3 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 48/126 (38%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T + T+ A +++ L ++++SG R+ A+D+ A + ++ + A
Sbjct: 3 TRVTTSMMANDTLANVQNNFQRLADANEKMASGKRMKFASDDPASSVSSMRLRKELAATE 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
I S + A + M + K K+ V +S+ + L+ +
Sbjct: 63 QYKRNIDDAQSWMQTADSAMDTVSKLYLHSKTKLINSVSGAMGKESLHALAADLRQNAQA 122
Query: 122 IARGSS 127
I ++
Sbjct: 123 IMTQAN 128
>gi|304319897|ref|YP_003853540.1| flagellin protein [Parvularcula bermudensis HTCC2503]
gi|303298800|gb|ADM08399.1| flagellin protein [Parvularcula bermudensis HTCC2503]
Length = 397
Score = 83.3 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 73/450 (16%), Positives = 143/450 (31%), Gaps = 54/450 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT+I + + A LR I+ +L + +++G V++ ADN ++ A ++ D
Sbjct: 1 MTAIGFSLPSQKALSALRIIDRDLAATERMIATGKEVAEPADNPYRYTTAMRLRGDATTA 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
++D++ L +S + + + + ++ I+ I + G + +IQ++I + Q+
Sbjct: 61 QTIADSLSLSASTLAVGASAAEQVQSLLGEIETLIASAEASGANRTAIQTDIDNIVDQIS 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + FN N L + + + S
Sbjct: 121 SVVTSARFNSVNLLSGSDPYRVFAGLTATDNGSPAVQTLTFARADLTQSAGTTGTGKTSG 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G G +
Sbjct: 181 EAGAVHAGSGLFSDSATTSV---------------------------------------- 200
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ A +A Y + A T + S
Sbjct: 201 -------ADSSSGSVTFASGAVEAGDIYTLTLGGETARYRAVAGDTADSVAATLGNRLSG 253
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T TVA N + +L G + ++ A +
Sbjct: 254 LVGTGITVAVASNVVTVTNASGGSLTLSATANAGAAGGGLEDLAQLNVGSSDAALSALAD 313
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+E ++ D + +A +IG+ + + + E G L DAD+A +
Sbjct: 314 IEGLIDLADRAVASLGSAQSRIGAQQTLLE-------DIAGQYEAGAAALTDADLAEAAA 366
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
+L LQ +Q LA++AL I N++ +R+LSLF
Sbjct: 367 KLQLLQARQALALEALEIANSAPSRLLSLF 396
>gi|221639488|ref|YP_002525750.1| Flagellar hook-associated protein 3 [Rhodobacter sphaeroides KD131]
gi|221160269|gb|ACM01249.1| Flagellar hook-associated protein 3 [Rhodobacter sphaeroides KD131]
Length = 409
Score = 83.3 bits (203), Expect = 9e-14, Method: Composition-based stats.
Identities = 50/444 (11%), Positives = 109/444 (24%), Gaps = 47/444 (10%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT + T A AS+ + + +Q R++S +R + + K L
Sbjct: 1 MT-LGTTLFATLASRNFSRLQTEIGTLQARIASEVRDPRPSADPTRAVQLSAAKEMEATL 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ ++ A + + M +K+ + ++ +
Sbjct: 60 GRYGANASSAADRLAHADVALGEVAARMRELKDVVLQAGNPTLSDEGRAGLRIVAESARE 119
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
L +A G+
Sbjct: 120 ALFALANRKDAMGQGLFAGYAAGPAFVKEG------------------------DAVRFA 155
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + R +V + S + +
Sbjct: 156 GNDGQPVAQLSETLRVATSLGGAEVFMAVPTEAGPRSVFDLADDLVATLSVPLAHSSPQR 215
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ + A ++ +P+ +G+ +I R
Sbjct: 216 SAEDAARLSLAA------------------PPAPATVRFTLTGPVGSVEIEQRLPGSALA 257
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + V + + + D+ + D + T
Sbjct: 258 AINAASAQTGVTATEEPDGTLVLGAVGRITVSDMSRSDDPRDVLATFTSAEDEGGWIMPA 317
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ D + + G++++ + Q D IK + + +G L D D+A
Sbjct: 318 LFDAASLTDAFDAAVSHMAEQRARAGALAASVDTQADAIKTRQTRIATAIGGLEDLDVAE 377
Query: 418 ESTRLSALQTQQQLAVQAL-SIVN 440
TRL L Q+ A Q I N
Sbjct: 378 AVTRLQQLLLTQEAAQQTYVKIAN 401
>gi|114765255|ref|ZP_01444387.1| flagellin C protein [Pelagibaca bermudensis HTCC2601]
gi|114542390|gb|EAU45418.1| flagellin C protein [Roseovarius sp. HTCC2601]
Length = 309
Score = 82.9 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 87/181 (48%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SI TN SAMSA LR IN +LE Q R+S+GL+V DNAAY+ I++ MK D+
Sbjct: 1 MSSINTNASAMSALSTLRQINSSLESTQSRISTGLKVESGKDNAAYFQISETMKGDSSVY 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+++++ + L + V A+ G D+ +K+ I++++ +L Q++
Sbjct: 61 ASINEGLTLTKNSVATARLGAETINDLGQQFLDKVAFAQGATGGQAEIENDLNELVKQMK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ S+FNG++ L + TA+ + G+ + + T +
Sbjct: 121 TTLQQSTFNGDDMLAAGAAAGTAASVAAANGALTSAGDSGGAAPVARNVVTGITRAGGTY 180
Query: 181 T 181
Sbjct: 181 A 181
Score = 63.2 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 53/88 (60%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+++ + T A K+G + Q++F+ + D ++ GVG ++DA+M E+ RL
Sbjct: 222 VLASTEGVAGAVTDIATKLGQSEKSLENQQEFLSSVVDNIDAGVGSMIDANMEEEAARLQ 281
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
ALQ QQQLA Q+LSI N + ILSLFR
Sbjct: 282 ALQVQQQLATQSLSIANQAPQNILSLFR 309
>gi|94265699|ref|ZP_01289438.1| Flagellin-like:Flagellin hook IN [delta proteobacterium MLMS-1]
gi|93453785|gb|EAT04157.1| Flagellin-like:Flagellin hook IN [delta proteobacterium MLMS-1]
Length = 1004
Score = 82.9 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 43/365 (11%), Positives = 99/365 (27%), Gaps = 13/365 (3%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI N L ++N ++ + ++SSG ++ +DN A ++++ +
Sbjct: 5 MQSIYANI-----QTNLGNLNKDMNRINQQISSGKQMDKISDNPVNLVNALGLRTNISEI 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
I G + ++ ++ +++ D+++ K + ++ E+ L
Sbjct: 60 GQYQKNIKYGETVINASEDALTQMNDLVTRAKTLAIQQASGSMTPENRENAAQEVKNLWE 119
Query: 118 QLRDIARG-----SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
Q +A F G R + + G F+ + K
Sbjct: 120 QAIILANSTVNNKYIFGGFRTDRYTEAEPAPFVQGARDGYFVHGETVKPGGMDGMLTGTI 179
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
T D + + LL I + V + G + + +
Sbjct: 180 ATDGSDPAAEDLAEGDLLINGVAIGDDDGVTLVDEDVEGLNMGGAYNLREAINHANDEHK 239
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT 292
A+ +G + S + + + + T
Sbjct: 240 TGVRASLTTQTASTAATSDADEDGTISFELNGHLIAVGVSESENINNRLVAAINAKSELT 299
Query: 293 TKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANT 352
+ D + + D + S D + H
Sbjct: 300 GVEADIGDDSNGAANGTLILRNVKAGDESDIAISSFNDSAGTDIDLANGDDEGNHAHKVD 359
Query: 353 DAYNE 357
+ +N
Sbjct: 360 ETHNT 364
Score = 52.4 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 38/84 (45%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A+++ ++ +DT T G+ ++RI +Q + ++ A + + L D D+
Sbjct: 916 ALQKSIAELDTLHNELTNQISDFGARANRIEVQNNIYMNLKLATSENLSELEDTDLVEAI 975
Query: 420 TRLSALQTQQQLAVQALSIVNNST 443
L A +T Q A+ + S +
Sbjct: 976 MELKAKETAYQAALSSASRTMQMS 999
>gi|325288762|ref|YP_004264943.1| flagellar hook-associated protein 3 [Syntrophobotulus glycolicus
DSM 8271]
gi|324964163|gb|ADY54942.1| flagellar hook-associated protein 3 [Syntrophobotulus glycolicus
DSM 8271]
Length = 304
Score = 82.9 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 21/180 (11%), Positives = 61/180 (33%), Gaps = 4/180 (2%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N + + L L+ +Q+++S+GLR+ +D+ A +K + ++
Sbjct: 6 NMFSRNLLLNLTAAQGKLDKLQNQMSTGLRIFRPSDDPVGIENALRLKGNLSMVAQYQKN 65
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLRDIA 123
G + ++ + + ++ + G + +I EI+++ Q++ +A
Sbjct: 66 AGEALNYMNTTDSVLGDLTKMIQRAQELVLSANNGTNSLNERNAIAQEISEINEQVKALA 125
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ + + G+ + I +D + + +
Sbjct: 126 -NTKVGNKYLFAGTKTEQAPMSGGTWSGNTDSVQFDVGENIKISIMVDGQQLFTTPNGTY 184
Score = 57.4 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 33/73 (45%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
E++ +D ++ TA ++G+ ++R+ + + M ++ + + D DMA T
Sbjct: 218 EVLDSLDQNLQNVTALRAELGARTNRLESIQSQLASMNYNLQANLSNVEDVDMAKAITDF 277
Query: 423 SALQTQQQLAVQA 435
+ Q A+
Sbjct: 278 TNQVNVYQSALAV 290
>gi|315639198|ref|ZP_07894360.1| flagellin subunit protein FlaA [Campylobacter upsaliensis JV21]
gi|315480524|gb|EFU71166.1| flagellin subunit protein FlaA [Campylobacter upsaliensis JV21]
Length = 116
Score = 82.9 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 36/97 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +T I IGS+ ++I + I + + V+ + D D
Sbjct: 20 VTTLKGAMAVMDVAETAIINLDQIRADIGSVQNQISATINNITVTQVNVKAAESNIRDVD 79
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ASES S Q A++ N S +L L +
Sbjct: 80 FASESANYSKANILAQSGAYAMAQANASQQNVLRLLQ 116
>gi|255613360|ref|XP_002539502.1| conserved hypothetical protein [Ricinus communis]
gi|223505567|gb|EEF22880.1| conserved hypothetical protein [Ricinus communis]
Length = 77
Score = 82.9 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 47/77 (61%), Positives = 61/77 (79%)
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
T+ K GSISSRI +Q +F+ + D++E GVGRLVDADM ES++L+ALQTQQQLA+Q
Sbjct: 1 MTSLGSKFGSISSRIDMQSNFVSSLSDSIESGVGRLVDADMEEESSKLTALQTQQQLAIQ 60
Query: 435 ALSIVNNSTARILSLFR 451
+LSI N+S+ ILSLFR
Sbjct: 61 SLSIANSSSQNILSLFR 77
>gi|254438497|ref|ZP_05051991.1| flagellar hook-associated protein 3 [Octadecabacter antarcticus
307]
gi|198253943|gb|EDY78257.1| flagellar hook-associated protein 3 [Octadecabacter antarcticus
307]
Length = 420
Score = 82.9 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 63/444 (14%), Positives = 138/444 (31%), Gaps = 34/444 (7%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI T + + I+ +++ Q ++S+G +++AA+ ++ L
Sbjct: 2 SISTKLLSDQMVSRFSQISEEIQLRQIKISTGREITEAAEKPFEAIKLSALEEGLTQLEG 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQL 119
+G S++ + ++ D+++ ++ + + TD ++ + E++QL+ L
Sbjct: 62 FGKNVGTAQSRLSMGDTVLTSVDDILAQLRERAVAANSDTFSTTDMEAFRVEVSQLREAL 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + NG+ + R D G+ + + P +V S
Sbjct: 122 VGLANTQTSNGQALFGGYATDIVPFSEDANGRMQYRGDGGEHTLAVSETMRLPTSVNGGS 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + ++ I + D SV+ + L+ + + T
Sbjct: 182 TFMNVQTDDGIESVFNIVDSFEAALATDDSVHGTLSGSADVGLSLSFNGDRTPRDWSLTL 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ G I + + + A+A+
Sbjct: 242 EGPDGSVFITALEVVGGSNDRLLEAINERSDETGVAAASV-------------------- 281
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
G S TL + + S T+ N
Sbjct: 282 -----------DGRLELTASEGSITLSNLDIGGVTLASRMPQFTITTNDDPNQTMVPRVQ 330
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + I + + +G+ R + QE I+ A+E V L D+
Sbjct: 331 LLSAQLEKITKAGQDVAISRTIVGARLQRANDQEASIQTRSVALESDVNELGSVDLEKVI 390
Query: 420 TRLSALQTQQQLAVQALSIVNNST 443
T L L + A QA S ++ +
Sbjct: 391 TELQTLLVMRDAARQAYSRISQGS 414
>gi|118443899|ref|YP_877946.1| flagellar hook-associated protein 3 [Clostridium novyi NT]
gi|118134355|gb|ABK61399.1| flagellar hook-associated protein 3, putative [Clostridium novyi
NT]
Length = 325
Score = 82.9 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 22/201 (10%), Positives = 61/201 (30%), Gaps = 5/201 (2%)
Query: 6 TN-HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN + + ++ N+ +Q + +SG + +D+ + + + +D S
Sbjct: 4 TNKMLSNNFLADMKTNLENINKIQQQNTSGKKFRKPSDDPFAVARSMQLHTDINTNKQYS 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIAR 124
I S+ +D + +A +V+ ++ + + G E ++ ++ +
Sbjct: 64 KNITDVSNWLDTTDTALGQAGNVLQRVRELLISSGNGGYTKS----ERRAIKDEINEKIG 119
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
S + + + + N + + +T D T
Sbjct: 120 EMSQILNTNFGGNYIFGGSRSTTKPMEVDKANGNTILIYNKKEGGKLDKTKDQDEYTQIA 179
Query: 185 ERYGLLDRNHKIKVEPQVLKD 205
+ + D
Sbjct: 180 SKLKIEVSQGVTMDYNVTATD 200
Score = 49.7 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 26/70 (37%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ I I +IG+ +RI D K + K + + D + T +
Sbjct: 241 LTNITDAISNVLKIRAEIGAKQNRIEGANDRNKDATFNMTKILSKHEDVNYTENMTDYAT 300
Query: 425 LQTQQQLAVQ 434
+ T ++Q
Sbjct: 301 MLTVYMASLQ 310
>gi|89214352|gb|ABD64488.1| flagellin [Bacillus mycoides]
Length = 219
Score = 82.9 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
D +++G +++ A+DN A +I M S + S + A+A + +V+
Sbjct: 1 DHLATGKKLNHASDNPANIAIVTRMPSRASGMRVAIRNNEDAISMLRTAEAALQTVTNVL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I ++FN + T
Sbjct: 61 QRMRDVAIQSANGTNSNKNRDSLNKEFQSLTEQIGYIDETTAFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNVTKHISPSPTQHDINIST 144
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANIAIVTRMPSRASGMRVAIRNNEDAISMLRTAEAALQTVTNVLQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + + + L
Sbjct: 62 RMRDVAIQSANGTNSNKNRDSLNKEFQSLTEQIGYIDETTAFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ ++ + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNVTKHISPSPTQHDINISTEQEARAAIRKIEEALQNVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A R+ DADMA E + + ++A
Sbjct: 182 NLNSQSTAFTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|295689337|ref|YP_003593030.1| flagellin domain-containing protein [Caulobacter segnis ATCC 21756]
gi|295431240|gb|ADG10412.1| flagellin domain protein [Caulobacter segnis ATCC 21756]
Length = 275
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/204 (21%), Positives = 84/204 (41%), Gaps = 3/204 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN A+ A Q L N L Q R+++G +V+ A DN A WS+A++ + + +L+A
Sbjct: 4 SINTNPGALLALQNLNATNTELNTTQSRINTGKKVASAKDNGAIWSMAKMQSASSSSLNA 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQ---SEITQLQSQL 119
V D++ G S +D+A A D++ +K K A + ++ S ++ L+ Q+
Sbjct: 64 VKDSLQRGQSTIDVALAAGDSITDLLMKMKEKALAASDTSLNTASFNALKADFDSLRKQI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++FNG + + + T G ++ + + P
Sbjct: 124 TKAVDNATFNGASLATGSVAAMTFLANADGSGFTVQAQTLSLAGLNLTTATAPTFTTATE 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVL 203
+ + + K+
Sbjct: 184 ANAMIAKMTDALQTATNKLSALGT 207
Score = 79.0 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 60/91 (65%)
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
M++ + ++ AT +G++S+ + F+ ++D+++ GVG LVDAD+A ES +
Sbjct: 185 NAMIAKMTDALQTATNKLSALGTLSTGLDTHLTFVGKLQDSLDTGVGNLVDADLAKESAK 244
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLFRG 452
L +LQT+QQL VQALSI N + ILSLF+G
Sbjct: 245 LQSLQTKQQLGVQALSIANQTPQSILSLFKG 275
>gi|225552502|ref|ZP_03773442.1| flagellar hook-associated protein 3 [Borrelia sp. SV1]
gi|225371500|gb|EEH00930.1| flagellar hook-associated protein 3 [Borrelia sp. SV1]
Length = 424
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/400 (10%), Positives = 102/400 (25%), Gaps = 27/400 (6%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G R+ ++ + A + +D L+ IG S + + + ++++ K
Sbjct: 36 GKRIVKLRNDPTGVTHAIRLDNDIFKLNVYIKNIGTSKSNLKYTEGYLQSLTNILTRAKE 95
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
G +S + ++ + L D+ ++ G + G+ S A V
Sbjct: 96 IAIQGASGTYESDDKKMISKEVNALLEDVVAIANAKGPDGYSIFSGTKIDSEAFKVTREN 155
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
K ++ + T+
Sbjct: 156 KISKTSKDGAGPQIIKVEYNGNQAEKKTEVYNDIH------------------------- 190
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + ++ + + + +
Sbjct: 191 --MSNNYPGNVVFFLQNQNIISSINTNGFAVKENTKIYIDNIEIGLTAGDTALDIVAKIN 248
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+SA + + + + + T L
Sbjct: 249 ESSAPVEASIDPVLNSLSIKTTTPHQIWITEEKESNVLQTLGILTKNNDTKLPPYNLSSS 308
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
S+ I E+L ++ ID +K + +G+ +R+
Sbjct: 309 TEVRSRSIFDALIELRDTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSY 368
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ I +++ + + D D+ T L+ QL++
Sbjct: 369 ERISKEAADMKEDMVQYTDLDVTKAITNLNMASLAYQLSI 408
>gi|170749427|ref|YP_001755687.1| hypothetical protein Mrad2831_3020 [Methylobacterium radiotolerans
JCM 2831]
gi|170655949|gb|ACB25004.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 405
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 62/451 (13%), Positives = 146/451 (32%), Gaps = 46/451 (10%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SI + + L+D + Q+R+++G V+ A DN + +Q + + +L
Sbjct: 1 MSSITLSAATRQNLLSLQDTAQLMATTQNRLATGKTVNSALDNPTNFFTSQALDGRSSSL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + D I G + A G++ ++ K+ + + + + +
Sbjct: 61 NTLLDGISNGIQSIQAANQGITSIQKLVDQAKSIANQALSTQLSTTGTAANAYSASTASQ 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + + + S +A++A
Sbjct: 121 TVLLTINGSSVSATINASSSISATVAA--------------------------------- 147
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
V A + + K+ + A ++ N+
Sbjct: 148 -------------LNAAVSSASTASSGAFGAGAIFSADSTGTKIVLNAQADVEFQNSGSQ 194
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A G A +T + S S + ++ + N + ++ +
Sbjct: 195 TALGFTASATTASTYGTAASTVVSSDLSISGTAQRASLANQYNNLLNQITQLASDASYNG 254
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + + + S + + + T +
Sbjct: 255 VNLIAGKGNDMNIKFNDTGSSNLNVASVDATSNGLGLTSITNSNSSTSQNGLGNFLLNSD 314
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + ++ + T +AA +GS S + ++DF K + + ++ G L +AD+ E+
Sbjct: 315 VNKTLATLTTAGATLNSAASTLGSNLSVVQNRQDFSKQLINVLQTGSANLTNADLNQEAA 374
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
AL T+Q + + ALS+ N++ +L L R
Sbjct: 375 NSQALSTRQSMGISALSLANSAQQGVLQLLR 405
>gi|269796410|ref|YP_003315865.1| flagellar hook-associated protein 3 [Sanguibacter keddieii DSM
10542]
gi|269098595|gb|ACZ23031.1| flagellar hook-associated protein 3 [Sanguibacter keddieii DSM
10542]
Length = 303
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 70/206 (33%), Gaps = 4/206 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T + + +A L+ L +Q+R SSG V+ A+D+ A + A ++ + A +
Sbjct: 3 TRVTHQSTQRAALTNLQATQSRLAQLQERASSGKMVTKASDDPAKAADAMALRKEQQASA 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG----TDSKSIQSEITQLQS 117
S I G S + ++ ++ ++ +++ G G +++ EI L+
Sbjct: 63 QYSRNIQDGVSWLTSIDTAINTSVAYLNRVRDLTVRGANTGAINAEAREALAVEIEGLRE 122
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
L A + + T G + + ++ + T + +
Sbjct: 123 SLAAQANTTYLGRSVFAGTSDGPAYTRDTVTGEYTYNSSAGTVERRTGAGTTVRVDADGA 182
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVL 203
+ + + +
Sbjct: 183 AVFGTSNDPDSPDASVYALLTDIAAT 208
Score = 38.2 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 15/151 (9%), Positives = 44/151 (29%)
Query: 287 IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI 346
+ NS+ V T D D ++
Sbjct: 141 TSDGPAYTRDTVTGEYTYNSSAGTVERRTGAGTTVRVDADGAAVFGTSNDPDSPDASVYA 200
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
++ ++ ID + + +G+ ++++ ++ + +++
Sbjct: 201 LLTDIAATLRAGGDVQSDITRIDARRDKMLSEVTGVGARTNQLESAKEILGHKAMSLKGD 260
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALS 437
+ + D D+ + L + Q A+ A +
Sbjct: 261 LSAVEDIDLPATLIELQMQEVAYQAALGATA 291
>gi|197104850|ref|YP_002130227.1| flagellin FljM [Phenylobacterium zucineum HLK1]
gi|196478270|gb|ACG77798.1| flagellin FljM [Phenylobacterium zucineum HLK1]
Length = 276
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ TN AM A Q L N L Q R+++G R+S A DN A W+IAQ ++ + +L
Sbjct: 3 MNSVNTNVGAMIALQNLNSTNTELATTQTRINTGKRISSAKDNGAIWAIAQNQRASSQSL 62
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQS 117
+AV +++ S VD+A + D++ +K K A + DS ++ + L+
Sbjct: 63 NAVRESLQRSISTVDVAISAGETVSDLLLQMKEKALAASDTSLDSNSLAALNDDFKALRD 122
Query: 118 QLRDIARGSSFNGENWLRTDL 138
QL + FNG N +
Sbjct: 123 QLAKAVSNAEFNGVNMVSASG 143
Score = 76.3 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 75/141 (53%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
V T + +S + + + A T + + M+S I+T
Sbjct: 136 VNMVSASGVTIAALANSNGTSKITVAAQSLALGGGNVTVAATASIATQSTAAAMISTINT 195
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
I+ ++A K+G+ S + +FI ++D+++ GVG LVDAD+A ES +L ALQT+QQ
Sbjct: 196 SIQNVSSALSKLGTGSKSLSSHLEFINKLQDSIDAGVGNLVDADLAKESAKLQALQTKQQ 255
Query: 431 LAVQALSIVNNSTARILSLFR 451
L +QALSI N S++ +L LFR
Sbjct: 256 LGIQALSIANQSSSILLGLFR 276
>gi|94312676|ref|YP_585885.1| flagellar hook-filament junction protein [Cupriavidus metallidurans
CH34]
gi|93356528|gb|ABF10616.1| flagellar hook-filament junction protein [Cupriavidus metallidurans
CH34]
Length = 412
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/435 (8%), Positives = 107/435 (24%), Gaps = 36/435 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T+ + + L VQ ++ +G R+ +D+ + A +
Sbjct: 3 VATSTLYQQGLASMNNQQSKLLYVQQQLGTGRRILTPSDDPVAATRALGVAQAQSVNGQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ ++ + + + + + I++ + S T LQ Q +
Sbjct: 63 ATTRKQANASLGLEENTLQSVTTTIQNIQSLLVNAGNGTMSDTDRASLATALQGQYDQLM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ + N G ++ + + G + + + ++ +
Sbjct: 123 GLANADDGNGNYLFAGLQANTVPFAKNAAGAAVYQGDNSHQLLQVDVARQMESGNTGAEV 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
Sbjct: 183 FMSVTTNAGYVLNGNAGNAGTA------------------------------------TY 206
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
G ++ P P + + + ++ + G + + + + + G
Sbjct: 207 GPISVSDPTNPLYGTPLKLTFQPNATTGAMEYQVSNATTGTAIGTAQPYSDGTPINVGGV 266
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + ++ + + N + +
Sbjct: 267 SFTVKGTPAAGDSLTAVPAQQAGADIFANLQNVISALKKPIDTGANTDAANANLQNVLAT 326
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ + + +GS + + + + + L D + AS T
Sbjct: 327 GIRQMGNSLDNVLTVRSSVGSRMQELDALDTIGQNRDLNSKSALSDLQDLNYASAITEYY 386
Query: 424 ALQTQQQLAVQALSI 438
QT Q A Q+
Sbjct: 387 QRQTALQGAQQSFMQ 401
>gi|332669179|ref|YP_004452187.1| flagellar hook-associated protein 3 [Cellulomonas fimi ATCC 484]
gi|332338217|gb|AEE44800.1| flagellar hook-associated protein 3 [Cellulomonas fimi ATCC 484]
Length = 303
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 53/139 (38%), Gaps = 3/139 (2%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
L+ ++ +Q ++SSG +++ +D+ A S ++ + AL+ + G
Sbjct: 13 QTLANLQGNLTSMADLQSKLSSGKKITVPSDDPAGASDVLRLRGEQRALTQYARNATDGD 72
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSF 128
S + + + ++ M ++ G G T ++ +EI ++ L D A +
Sbjct: 73 SWLTTVDSALQSSLTAMRRARDLTMQGGNGGLGQTSRDALAAEIEGVRGTLMDQANATYA 132
Query: 129 NGENWLRTDLGSSTASIAK 147
+ T +
Sbjct: 133 GRTVFAGTSAAGFAFDASA 151
>gi|254442620|ref|ZP_05056096.1| Bacterial flagellin N-terminus domain protein [Verrucomicrobiae
bacterium DG1235]
gi|198256928|gb|EDY81236.1| Bacterial flagellin N-terminus domain protein [Verrucomicrobiae
bacterium DG1235]
Length = 271
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN SA+SA L N L+ R+SSG ++ + AD+A +++ M + +A
Sbjct: 4 VINTNSSAISAKNNLNKSNAMLQNSLARLSSGSKIVNPADDAGGLAVSMKMSAAIKRTAA 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTI---KNKITAGVERGTDSKSIQSEITQLQSQL 119
V+D I S + + A ++ + + + TD + +E L++QL
Sbjct: 64 VNDNIANAQSFLQTQDGALGTATKILDRMSELRTLADDVTKNSTDIGNYNTEFQALKAQL 123
Query: 120 RDI 122
D+
Sbjct: 124 TDV 126
Score = 74.4 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 40/95 (42%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ +S I T I+ G+ SSR+ D + + + +E R++D D+
Sbjct: 176 SSDTLTATALSTITTGIQNVATLRATNGAESSRLSFASDMLTVNQQNLEAANSRIIDVDV 235
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
ASEST L+ Q LS N S+ L L
Sbjct: 236 ASESTALARANILVQAGSSMLSQANASSQVALRLL 270
>gi|167644042|ref|YP_001681705.1| flagellin domain-containing protein [Caulobacter sp. K31]
gi|167346472|gb|ABZ69207.1| flagellin domain protein [Caulobacter sp. K31]
Length = 273
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN AM A Q L N L+V Q R+++G +V +A DN A W++ + S +L++
Sbjct: 5 SINTNSGAMIALQNLNSTNSELQVTQQRINTGKKVGNAKDNGAIWAMGKTQSSTASSLNS 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQL 119
V D++ G S +D+A A D++ +K K A + ++ S + + T L+ Q+
Sbjct: 65 VKDSLQRGQSTIDVALAAGDTVTDLLGKMKEKALAASDTSLNTASFNALVSDFTSLRDQI 124
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+ FNG +
Sbjct: 125 TKAVTNAKFNGVSIADGSTTKLAFLANSDGSQFT 158
Score = 67.5 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 55/87 (63%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ A + M++ + + + AT +G++S+ + F+ ++D+++ GVG LVDAD
Sbjct: 177 FTTAAAAKTMIATVTSALGTATNKLASLGTMSTGLDTHLTFVGKLQDSLDAGVGNLVDAD 236
Query: 415 MASESTRLSALQTQQQLAVQALSIVNN 441
+A ES +L +LQT+QQL VQALSI N
Sbjct: 237 LAKESAKLQSLQTKQQLGVQALSIANQ 263
>gi|225618971|ref|YP_002720197.1| flagellar hook-associated protein FlgL [Brachyspira hyodysenteriae
WA1]
gi|225213790|gb|ACN82524.1| flagellar hook-associated protein FlgL [Brachyspira hyodysenteriae
WA1]
Length = 417
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/423 (10%), Positives = 108/423 (25%), Gaps = 31/423 (7%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
++ +E Q R+S+G RV N + K+ ++ I G
Sbjct: 11 RTVSTIKRNYNEMEASQTRLSTGQRVQYPHQNVTSTINSIYYKTRMSSVDRYQSNIVDGK 70
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
K+ +A MS + ++ ++ G + +++ + I
Sbjct: 71 EKLSVAHDSMSAITEALNRARDLAIQGANSTYGADDRAKMAMEVEEMIERI--------- 121
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
+ + I +T + E+ G
Sbjct: 122 ----------------------YDISKTQSKGEYIFSGTSIKTAPFRALYGHDEKAGRSI 159
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
I ++ ++ + + T + +A+ A I +
Sbjct: 160 VKSVIYEGDGNAQNREIENGQVINVATPGNYAFWGTDMEIISTTDASTYIAAEDQDIMID 219
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + + K + V
Sbjct: 220 DMVVNIKQGDNIEAIVQRINDANGNVSASIGDLRGGEKVIQLKTGSPHKILLQDLAGGTV 279
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
V S P + +G S+ I + + E + +ID+
Sbjct: 280 LQDIGLVRAGSANNPENNYEPSALVTGKSVFETLIYLRDAMLNDDVRAIGSEALGYIDSS 339
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ S +R+ + + + A+E+ + + + D A E + Q
Sbjct: 340 LDNVATVQANASSKVTRLDMGYASFEDQKLAIEEALAKNENIDYAEEIVNFNMWQYAHNA 399
Query: 432 AVQ 434
++Q
Sbjct: 400 SLQ 402
>gi|182679605|ref|YP_001833751.1| flagellin domain-containing protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182635488|gb|ACB96262.1| flagellin domain protein [Beijerinckia indica subsp. indica ATCC
9039]
Length = 328
Score = 82.9 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/141 (29%), Positives = 69/141 (48%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
NT + + + I + + + ++ + +
Sbjct: 188 TSNTLLFTTDANGVYAATSSGAVGILDKAGANYTGGSVLNFDISSATAGDIANILKDVGS 247
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
I TAA +G+ ++ I++Q +FI + D++ GVG LVDA+M ST+L+ALQ QQQ
Sbjct: 248 AIDKVTAAGSYLGATTNNINVQANFISNLSDSLTSGVGALVDANMNEASTKLAALQVQQQ 307
Query: 431 LAVQALSIVNNSTARILSLFR 451
L +QALSI N++T IL LF+
Sbjct: 308 LGIQALSIANSNTQLILRLFQ 328
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 60/181 (33%), Positives = 88/181 (48%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+S+LTN S+M+A Q L +L+ Q +S+G R+S AAD A+YWSIA MKS GAL
Sbjct: 28 MSSLLTNTSSMTALQVLSQTQQSLQKTQSEISTGQRISSAADGASYWSIATKMKSTVGAL 87
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AVSDA+ + V G+ ++ V+ I+ + G D + IQ +I Q L
Sbjct: 88 GAVSDALAGSAQLVSTMNNGVINSVSVLQVIQRDLVQASNPGADKQKIQDDIGTQQKLLI 147
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I + S+FNG N L S+ + +A + + N T + SS
Sbjct: 148 SIGQSSTFNGINLLAASAASTQSFVASYDSTNGVSSLNIDTSNTLLFTTDANGVYAATSS 207
Query: 181 T 181
Sbjct: 208 G 208
>gi|297618068|ref|YP_003703227.1| flagellar hook-associated protein 3 [Syntrophothermus lipocalidus
DSM 12680]
gi|297145905|gb|ADI02662.1| flagellar hook-associated protein 3 [Syntrophothermus lipocalidus
DSM 12680]
Length = 294
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/202 (12%), Positives = 58/202 (28%), Gaps = 5/202 (2%)
Query: 6 TNHSAMSAS-QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN ++ + L LE Q+ ++S ++ +D+ S
Sbjct: 4 TNSMMITNLKRDLSTNMRTLEKYQNMLASVQKIRKPSDDPVAVINTLRYSSTIMEAEEYL 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRD 121
I + ++ + + D++ G ++I E+ QL Q+
Sbjct: 64 GKIDEAKNFLNTTDSALGNITDILQRANELTIQGLNGTNSEASREAIAKEVRQLADQIGV 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA +++ ++ + S IG+ + I +
Sbjct: 124 IA-NTTYGSKHVFAGTNVTEAPFTGSSWIGNDRVMELEIGAGVKIPVNSVMGKFFYNEDA 182
Query: 182 DGTERYGLLDRNHKIKVEPQVL 203
D + LL+
Sbjct: 183 DEPGLFQLLNGIADHLETGDTT 204
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/131 (12%), Positives = 46/131 (35%)
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
+V + D+ + + A+ + A+++
Sbjct: 150 WIGNDRVMELEIGAGVKIPVNSVMGKFFYNEDADEPGLFQLLNGIADHLETGDTTALQKD 209
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ + ++ + +G+ +R+ LQ++ ++ R + + + DADMA L
Sbjct: 210 LGLVQERLDQCNSERAIVGAKVNRLELQQNRLETTRTNYTELLSKNQDADMAEVIMDLKM 269
Query: 425 LQTQQQLAVQA 435
+ + ++ A
Sbjct: 270 QENVYRASLAA 280
>gi|256833256|ref|YP_003161983.1| flagellar hook-associated protein 3 [Jonesia denitrificans DSM
20603]
gi|256686787|gb|ACV09680.1| flagellar hook-associated protein 3 [Jonesia denitrificans DSM
20603]
Length = 305
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/213 (11%), Positives = 71/213 (33%), Gaps = 5/213 (2%)
Query: 1 MTSILTNHSAMSA-SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M S +T SA + ++ + +Q++ SSG +++ +D+ A S + ++++ A
Sbjct: 1 MISRVTQQSAQRSVLANMQKNLSAMAKLQEQASSGKKIAKVSDDPARASDSMSLRAERAA 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE----RGTDSKSIQSEITQL 115
+ G S +++ + ++ ++ ++ G +++ +EI +
Sbjct: 61 TQQYTRNAQDGLSWLNVIDSSLTSTASMLRRARDLTVQGSNLGTMSAQAREAVAAEIDGI 120
Query: 116 QSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
++ + + A + T + + D + +
Sbjct: 121 KAGIMEQANTQYLGRSVFAGTSSAGHAFEDTGTGYAFTGAAGTSVERRIAADVTVRVDAD 180
Query: 176 LLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
D TE + + + +
Sbjct: 181 GASVFGDPTETDPASPNYNVFVLLDDIANTLRT 213
Score = 45.9 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 31/81 (38%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ ++ +DT+I A +G+ ++++ + + + + D D+A
Sbjct: 213 TGGDPQSALNQLDTRIDAVLNTATTVGARTNQVESAISLTSYKSETLRTDISSVEDIDLA 272
Query: 417 SESTRLSALQTQQQLAVQALS 437
L + Q ++ A +
Sbjct: 273 QTIMDLKLQEVAYQSSLNASA 293
>gi|89214276|gb|ABD64450.1| flagellin [Bacillus thuringiensis serovar roskildiensis]
Length = 219
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A +I M + G + + A+A + +V+
Sbjct: 1 EHLATGKKLNHASDNPANVAIVTRMHARAGGMRVAIRNNEDAILMLRTAEAALQTVTNVL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDVVVQSANGTNSNKNRDSLNKEFQSLTEQIAYIDETTEFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNVTKHIPPSPTQHDINIST 144
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A T + + +
Sbjct: 2 HLATGKKLNHASDNPANVAIVTRMHARAGGMRVAIRNNEDAILMLRTAEAALQTVTNVLQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + + T T + + + L
Sbjct: 62 RMRDVVVQSANGTNSNKNRDSLNKEFQSLTEQIAYIDETTEFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNVTKHIPPSPTQHDINISTEQEARAAIRKIEEALQNVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSTALTATASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|114330368|ref|YP_746590.1| flagellar hook-associated protein FlgL [Nitrosomonas eutropha C91]
gi|114307382|gb|ABI58625.1| flagellar hook-associated protein 3 [Nitrosomonas eutropha C91]
Length = 299
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/145 (13%), Positives = 48/145 (33%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN ++ + +L +Q ++SSG R+ +D+ + A + +
Sbjct: 3 VSTNTLYDQGTRSMLQQQSSLFKLQQQLSSGKRIMTPSDDPIGAARAHELSQSLALNTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ---SQLR 120
+D + + + +V+ +++ A Q +L+ L
Sbjct: 63 ADNRYRAMDSLQQVDSTLGSVSNVIQSVRTMAVAAGNPAYSDNERQMMAVELRGHFEHLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
+A G G++ +
Sbjct: 123 GLANTKDEQGNYLFSGFKGNTQPFV 147
Score = 54.0 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 25/71 (35%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
++ +DT + +GS I + + ++ + RL D D A + +
Sbjct: 214 NVLQELDTALDNVLTKRAAVGSRLQEIDALQQIGEDTAVQYQQSLSRLQDLDFAQAISDM 273
Query: 423 SALQTQQQLAV 433
Q + A
Sbjct: 274 VRQQALLEAAQ 284
>gi|222099584|ref|YP_002534152.1| Flagellar hook-associated protein 3 [Thermotoga neapolitana DSM
4359]
gi|221571974|gb|ACM22786.1| Flagellar hook-associated protein 3 [Thermotoga neapolitana DSM
4359]
Length = 304
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 49/136 (36%), Gaps = 4/136 (2%)
Query: 6 TN-HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN + ++ + + D++SSG RV +D+A A + + L
Sbjct: 4 TNKMISDRVLFNIQTSLKRIAKLHDQLSSGYRVRYPSDDAVVAKRASDIMTRRRELKQFQ 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
I + V+ + + + ++ + + ++I EI +++ L +
Sbjct: 64 RNIDHVQTYVNAYDSALQTVSAISQRLRELLVRAANGTLSKAEREAIAEEIDRIRDNLVE 123
Query: 122 IARGSSFNGENWLRTD 137
IA N + D
Sbjct: 124 IANTRIGNEYIFSGYD 139
>gi|170748918|ref|YP_001755178.1| hypothetical protein Mrad2831_2500 [Methylobacterium radiotolerans
JCM 2831]
gi|170655440|gb|ACB24495.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 405
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 62/451 (13%), Positives = 146/451 (32%), Gaps = 46/451 (10%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SI + + L+D + Q+R+++G V+ A DN + +Q + + +L
Sbjct: 1 MSSITLSAATRQNLLSLQDTAQLMATTQNRLATGKTVNSALDNPTNFFTSQALDGRSSSL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+++ D I G + A G++ ++S K+ + + + + +
Sbjct: 61 NSLLDGISNGIQSIQAANQGITSIQKLVSQAKSIANQALSTQLSTTGTAANAYSASTASQ 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + + + S +A++A
Sbjct: 121 TVLLTINGSSVSATINASSSISATVAA--------------------------------- 147
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
V A + + K+ + A ++ N+
Sbjct: 148 -------------LNAAVSSASTASSGAFGAGAIFSADSTGTKIVLNAQADVEFQNSGSQ 194
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A G A +T + S S + ++ + N + ++ +
Sbjct: 195 TALGFTASATTASTYGTAASTVVSSDLSISGTAQRASLANQYNNLLNQITQLASDASYNG 254
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + + + S + + + T +
Sbjct: 255 VNLIAGKGNDMNIKFNDTGSSNLNVASVDATSNGLGLTSITNSNSSTSQNGLGNFLLNSD 314
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + ++ + +AA +GS S + ++DF K + + + G L +AD+ E+
Sbjct: 315 VNKTLATLTKADASLNSAASTLGSNLSVVQNRQDFSKQLVNVLSTGSANLTNADLNQEAA 374
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
AL T+Q + + ALS+ N++ +L L R
Sbjct: 375 NSQALSTRQSMGISALSLANSAQQGVLQLLR 405
>gi|289523317|ref|ZP_06440171.1| flagellar hook-associated protein 3 [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289503009|gb|EFD24173.1| flagellar hook-associated protein 3 [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 882
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/177 (10%), Positives = 49/177 (27%), Gaps = 3/177 (1%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ + +Q ++S+G +D+ + + +
Sbjct: 7 LSDMHSNLERMLKLQRQMSTGKLHQKPSDDPLAVGRELSISTTIFENEQYLKNLDDAMMW 66
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIARGSSFNG 130
+ A +++ DVM I+ + + EI QLQ +L + A S
Sbjct: 67 LSNTDAALNQITDVMHRIRELAIYAGNGTFEEAEYNAIADEIYQLQEELINTANFSVEGR 126
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
+ + + ++ ++ + + E+Y
Sbjct: 127 YLFSGLNATQKPFLRDERGKVVYMGNEIHVEYEVERKVTGQVSFHGREVFPEHYEQY 183
Score = 63.2 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 31/75 (41%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
++ ID I + G++ R +K M + ++ D D+A +T+
Sbjct: 796 NILPKIDDAIDDVLRVRTQSGALQKRYETSSSRLKQMNLNYNELYSKVSDTDLAEAATKF 855
Query: 423 SALQTQQQLAVQALS 437
+ Q+ Q ++ ++
Sbjct: 856 AMAQSVYQASLATIA 870
>gi|309789350|ref|ZP_07683940.1| flagellin domain protein [Shigella dysenteriae 1617]
gi|308922744|gb|EFP68261.1| flagellin domain protein [Shigella dysenteriae 1617]
Length = 85
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+D I +G+I +R+ + + + R+ DAD A+E + +S Q
Sbjct: 1 MDDAIASIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQI 60
Query: 428 QQQLAVQALSIVNNSTARILSLFRG 452
QQ L+ N ++LSL +G
Sbjct: 61 IQQAGNSVLAKANQVPQQVLSLQQG 85
>gi|94270460|ref|ZP_01291749.1| Flagellin-like [delta proteobacterium MLMS-1]
gi|93450789|gb|EAT01837.1| Flagellin-like [delta proteobacterium MLMS-1]
Length = 266
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I ++ ++M ++R + +VSSG R++ AAD+AA IA +++S L
Sbjct: 21 INSDLASMFTLDRMRQSQQDWAASLQQVSSGRRLNQAADDAASLQIANLLESQARGLGQQ 80
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ G + IA + + DV+ ++ K + + +++Q E+ +L
Sbjct: 81 ARNAADGVAMTQIADGALRQGGDVLQEVRQKALQAANASQSASSRQALQGEVDRLLGSYN 140
Query: 121 DIARGSSFNGENWLRTD 137
+I ++FNG+ L
Sbjct: 141 EILATTTFNGQQLLPDT 157
Score = 62.1 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 44/128 (34%), Gaps = 1/128 (0%)
Query: 326 DSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
S ++ + + +D ++ G +GS
Sbjct: 137 GSYNEILATTTFNGQQLLPDTLAVGGEVDLGNPEGATAAAGLMDEALEGLNRVRGDLGSR 196
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV-NNSTA 444
++++ + + ++ DAD+A E+ LS +Q +Q + AL+ N + A
Sbjct: 197 QNQLNSELASLANATVNTHAAQSQVADADLAQEAMVLSQMQVLRQAQLFALTQGRNLNQA 256
Query: 445 RILSLFRG 452
L +G
Sbjct: 257 NAQELLQG 264
>gi|27381976|ref|NP_773505.1| flagellin [Bradyrhizobium japonicum USDA 110]
gi|27355146|dbj|BAC52130.1| flagellin [Bradyrhizobium japonicum USDA 110]
Length = 314
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 4/208 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+S+LTN SAM+A Q LR+++ L Q+R+S+G RVS A+DN+AYWSIA M+SDN ALS
Sbjct: 3 SSLLTNSSAMTALQTLRNVSTQLATTQNRISTGQRVSTASDNSAYWSIATSMRSDNAALS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKA----IDVMSTIKNKITAGVERGTDSKSIQSEITQLQS 117
AVSD++GL ++ VD ++ ++ ++ + G D IQ+E+TQ+Q
Sbjct: 63 AVSDSLGLSAAMVDTEYTALNTVIGDKNSGLTKLQALLVEAKTAGIDRTKIQAEVTQIQQ 122
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ + ++ NG NWL D+ S+++ + T + T L
Sbjct: 123 DMKLKSDSATINGINWLSIDITPSSSTATPTTFNLVSSYSRVGGTPTIGSITVTTATYAL 182
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKD 205
++ + L +
Sbjct: 183 YTTGGSSTTGILDTVVGGSTGASVASIN 210
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/97 (45%), Positives = 67/97 (69%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ ++ ++ + I +AA +G++ +RI +F+K + D+V++G+G+LVDAD
Sbjct: 218 ATDQTKLDGYINQVTAAINSVASAAANLGAVKNRIATNTEFVKNLMDSVDRGIGQLVDAD 277
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
M +ESTRL ALQTQQQL VQALSI N ++ ILSLFR
Sbjct: 278 MNAESTRLQALQTQQQLGVQALSIANQNSQSILSLFR 314
>gi|327441343|dbj|BAK17708.1| flagellin [Solibacillus silvestris StLB046]
Length = 295
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 11/107 (10%), Positives = 39/107 (36%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + + + L + +Q++++SG ++ +D+ + D +
Sbjct: 3 ITQSMLSSNMLRNLNTSYGKMSKLQEQINSGKIINRPSDDPVVAVKGMGYRVDLDKIEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS 110
+ + +D + + + + + ++ +T S+ Q
Sbjct: 63 QRNMNTAHNWIDSSDEALDQVGNALQRVQELVTQAANDSNTSEDRQK 109
Score = 53.2 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/233 (8%), Positives = 56/233 (24%)
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
V + + + + + + +
Sbjct: 49 GMGYRVDLDKIEQYQRNMNTAHNWIDSSDEALDQVGNALQRVQELVTQAANDSNTSEDRQ 108
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ + T +S +N G
Sbjct: 109 KIQVEIEQIQQQMRDLANTKVGENYIFSGTNTSSPLYPDSTSNIMSNGTGLNKAVEINVY 168
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKI 382
+ + ++P E + A + + + +++ I Q I
Sbjct: 169 DGIKLQVNIPGEALFKGIDDMMQSVSDALNNPVSTGQEIGDLLGDIQGQSNVVLEQRAII 228
Query: 383 GSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
G+ +R L + + + + K + + D D A T ++ ++ Q ++
Sbjct: 229 GARQNRAELMGNRLSISEVNITKQLSKNEDTDYAKAITEMTTAESIHQASLSV 281
>gi|117928039|ref|YP_872590.1| flagellar hook-associated protein 3 [Acidothermus cellulolyticus
11B]
gi|117648502|gb|ABK52604.1| flagellar hook-associated protein 3 [Acidothermus cellulolyticus
11B]
Length = 298
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/202 (12%), Positives = 62/202 (30%), Gaps = 4/202 (1%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N L+ + L ++ ++SSG R+S +D+ A +
Sbjct: 8 NAVTSLMLAGLQSSSSRLSTLEQQLSSGRRISKPSDDPVGTGQAMLFNEQIARTKQYQRN 67
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG----TDSKSIQSEITQLQSQLRDI 122
G + + IA + ++++ ++ T G T SI E+ L+ Q+ +
Sbjct: 68 ANDGLAWLGIADNALQTGVNILQRLQVLTTQAANTGTADATARASILEEVKSLKEQMLAV 127
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A + N + T ++ S + D ++ + + +
Sbjct: 128 ANTTYQNRPIFGGTTSSPVAYAVNGSGTVVYQGDTGSVLRTVGDNVQVKVNIDAAQAFGP 187
Query: 183 GTERYGLLDRNHKIKVEPQVLK 204
+ ++
Sbjct: 188 PGNDVFTMFDTIASDLQNNPGN 209
Score = 47.8 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 34/88 (38%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
N + +S I + T+A G+ +RI + + + + + D D
Sbjct: 205 NNPGNLSNDLSLIAGALDRMTSAQATEGAAYNRITAMNNAAGQKLNTLTGNLSDVQDVDT 264
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNST 443
A T L+ Q Q ++ A++ V +
Sbjct: 265 AQAVTELTMQQVSYQASLAAMARVLQMS 292
>gi|332558501|ref|ZP_08412823.1| flagellar hook-associated protein 3 [Rhodobacter sphaeroides WS8N]
gi|332276213|gb|EGJ21528.1| flagellar hook-associated protein 3 [Rhodobacter sphaeroides WS8N]
Length = 409
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/444 (10%), Positives = 108/444 (24%), Gaps = 47/444 (10%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT + T A AS+ + + +Q R++S +R + + K L
Sbjct: 1 MT-LGTTLFATLASRNFSRLQTEIGTLQARIASEVRDPRPSADPTRAVQLSAAKEMEATL 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ ++ A + + M +K+ + ++ +
Sbjct: 60 GRYGANASSAADRLAHADVALGEVAARMRELKDVVLQAGNPTLSDEGRAGLRIVAESARE 119
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
L +A G+
Sbjct: 120 ALFALANRKDAMGQGLFAGYAAGPAFVKEG------------------------DTVRFA 155
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + R +V + S + +
Sbjct: 156 GNDGQPVAQLSETLRVATSLGGAEVFMAVPTEAGPRSVFELADDLVATLSVPLAHSSPQR 215
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ + ++ +P+ G+ +I R
Sbjct: 216 SAEDTARLSLAA------------------PPAPATVRFTLTGPGGSVEIEQRLPGSALA 257
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + V + + + D+ + D + T
Sbjct: 258 AINAASPQTGVTATEEPDGTLVLGAVGRITVSDMSRSDDPRDVLATFTSADDKGGWIMPA 317
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ + D + + G++++ + Q D I+ + + +G L D D+A
Sbjct: 318 RFDAASLTDAFDAAVSHMAEQRARAGALAASVDTQADAIRTRQTRIATAIGGLEDLDVAE 377
Query: 418 ESTRLSALQTQQQLAVQAL-SIVN 440
TRL L Q+ A Q I N
Sbjct: 378 AVTRLQQLLLTQEAAQQTYVKIAN 401
>gi|11136620|gb|AAG31287.1|AF317649_2 flagellar hook-associated protein 3 [Rhodobacter sphaeroides]
Length = 409
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/444 (11%), Positives = 108/444 (24%), Gaps = 47/444 (10%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT + T A AS+ + + +Q R++S +R + + K L
Sbjct: 1 MT-LGTTLFATLASRNFSRLQTEIGTLQARIASEVRDPRPSADPTRAVQLSAAKEMEATL 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+ ++ A + + M +K+ + ++ +
Sbjct: 60 GRYGANASSAADRLAHADVALGEVAARMRELKDVVLQAGNPTLSDEGRAGLRIVAESARE 119
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
L +A G+
Sbjct: 120 ALFALANRKDAMGQGLFAGYAAGPAFVKEG------------------------DTVRFA 155
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + R +V + S + +
Sbjct: 156 GNDGQPVAQLSETLRVATSLGGAEVFMAVPTEAGPRSVFELADDLVATLSVPLAHSSPQR 215
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
T + ++ +P+ G+ +I R
Sbjct: 216 TAEDTARLSLAA------------------PPAPATVRFTLTGPGGSVEIEQRLPGSALA 257
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + V + + + D+ + D + T
Sbjct: 258 AINAASPQTGVTATEEPDGTLVLGAVGRITVSDMSRSDDPRDVLATFTSADDKGGWIMPA 317
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ + D + + G++++ + Q D I+ + + +G L D D+A
Sbjct: 318 RFDAASLTDAFDAAVSHMAEQRARAGALAASVDTQADAIRTRQTRIATAIGGLEDLDVAE 377
Query: 418 ESTRLSALQTQQQLAVQAL-SIVN 440
TRL L Q+ A Q I N
Sbjct: 378 AVTRLQQLLLTQEAAQQTYVKIAN 401
>gi|56964842|ref|YP_176573.1| flagellar hook-associated protein 3 FlgL [Bacillus clausii KSM-K16]
gi|56911085|dbj|BAD65612.1| flagellar hook-associated protein 3 FlgL [Bacillus clausii KSM-K16]
Length = 353
Score = 82.5 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 20/205 (9%), Positives = 67/205 (32%), Gaps = 3/205 (1%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
++ + + L + D++S+ +++ + + + + + + +
Sbjct: 7 MMMTNSLRYSQSSYQRLSTLYDQISAQKKITRFSQDPVVAAKSMQHRQSLAQMEQYKRNV 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIAR 124
S ++ + + ++ ++ G G + K+I E+ +L++ L +A
Sbjct: 67 NEAQSWLNQGDTSLKEVSSILKRVRELAITGSTDGYGEEERKNIAHELEELRNHLITVAN 126
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + +D ++ + + DN K+ Y D + +
Sbjct: 127 SNVNGKYIFNGSDTDNTPVQELSPSKLNGEKLDNVKITYGGQIYDYDADAGHFVARGGED 186
Query: 185 ERYGLLDRNHKIKVEPQVLKDIDVS 209
+ + KD+ +
Sbjct: 187 TLVLNGENIETGTGDVVAEKDMLIM 211
Score = 44.3 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 35/344 (10%), Positives = 86/344 (25%), Gaps = 6/344 (1%)
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
+T G+ + QS +L + I+ + R A+ + S
Sbjct: 3 VTQGMMMTNSLRYSQSSYQRLSTLYDQISAQ-----KKITRFSQDPVVAAKSMQHRQSLA 57
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
+ + K + +L+ L + +R L + + +
Sbjct: 58 QMEQYKRNVNEAQSWLNQGDTSLKEVSSILKRVRELAITGSTDGYGEEERKNIAHELEEL 117
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
++ + ++ + T G
Sbjct: 118 RNHLITVANSNVNGKYIFNGSDTDNTPVQELSPSKLNGEKLDNVKITYGGQIYDYDADAG 177
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + + N ++ + +
Sbjct: 178 HFVARGGEDTLVLNGENIETGTGDVVAEKDMLIMRISTNQKDVSFELQKGVEIQVNTDAR 237
Query: 335 IDSGYS-MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ A D + E +S ID ++ A G++G+ +R+ L E
Sbjct: 238 KLFSDELYSDFFMFEQALLDPETSAEDLGEFISKIDAHLRNAADVHGQLGARMNRVDLME 297
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
D + V++ D D++ +L + A+ +
Sbjct: 298 DRLGQQEYFVKETKSMNEDLDVSEAIMKLLVAEGVHNAALAVTA 341
>gi|13560134|emb|CAC36224.1| flagelline [Treponema vincentii]
Length = 222
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 15/114 (13%), Positives = 34/114 (29%)
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + + + + + + ID +K
Sbjct: 109 GANMDQSEKLFVGTMTAMALGLAGGAQGGEGDMITISSVEGANMAIGTIDNALKQINKQR 168
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R L + + + + ++ R+ DADMA E + Q Q
Sbjct: 169 ADLGAYQNRFELAYNGVAIASENLQAAESRIRDADMAKEVVEYTKNQILMQSGT 222
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Query: 47 WSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGT 103
++++ M+S L+ I G S + + +++ D+M ++
Sbjct: 1 LAVSEKMRSQIRGLNQAGQNIQNGVSFIQATEGYLAETTDIMQRMRELAVQAANGIYSAE 60
Query: 104 DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
D IQ E++QL ++ IA + FNG N L +A+
Sbjct: 61 DRMQIQVEVSQLVDEVDRIASHAQFNGMNLLTGRFAKDSATG 102
>gi|222086410|ref|YP_002544944.1| flagellin C protein [Agrobacterium radiobacter K84]
gi|221723858|gb|ACM27014.1| flagellin C protein [Agrobacterium radiobacter K84]
Length = 350
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 65/249 (26%), Positives = 103/249 (41%)
Query: 9 SAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
S A + LR+ +L V Q ++SSGLRV A D+A YW I+ + ++D GA+SAV DA+G
Sbjct: 26 SVNIALEVLRNTQSDLNVAQRQMSSGLRVQTAKDDATYWRISALTRTDIGAVSAVQDALG 85
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSF 128
L S+ V A G++ AIDV++ I++K+ + E D + EITQL+ QLR + + +SF
Sbjct: 86 LASATVSTASTGVTSAIDVVTQIRSKLVSAYEGSVDKTKLNDEITQLKDQLRSVGQSASF 145
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
NG NW+ G + D + + + S+
Sbjct: 146 NGVNWIVLQDGEDPTEPHRIPGSVIRNTDGTISIGMLDYEGVTSTSGTIVSTDARYLLDD 205
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
+ V + +S+K L A + T+
Sbjct: 206 QSGGSGGYGVLTSTAFATEAGAAQNYVLVSSKYGDTNGQVEISLDANTTNGALTDMVNTV 265
Query: 249 PVPLPAAPA 257
L
Sbjct: 266 TAMLHQLNT 274
Score = 62.1 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 57/96 (59%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
A+ +MV+ + + GS+ +R++LQ F + D++ GVG+LVDADM
Sbjct: 253 TTNGALTDMVNTVTAMLHQLNTIGSAFGSLETRVNLQSQFASDLSDSLTSGVGKLVDADM 312
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+S++L ALQTQQQL +Q+LSI N S + LF+
Sbjct: 313 EQQSSKLLALQTQQQLGIQSLSIANASYNTLTQLFQ 348
>gi|226314924|ref|YP_002774820.1| flagellar hook-associated protein 3 [Brevibacillus brevis NBRC
100599]
gi|226097874|dbj|BAH46316.1| flagellar hook-associated protein 3 [Brevibacillus brevis NBRC
100599]
Length = 300
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/210 (10%), Positives = 66/210 (31%), Gaps = 3/210 (1%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N + + L + N++ +Q +++SG ++ +D+ + +S
Sbjct: 8 NMLNSNMLRNLHNSMRNMDKLQHQLASGSKIEKPSDDPVVAARGMFYRSSLMENDQYKRN 67
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIA 123
+ S +D+ M + +VM +K + + +++ EI +L++ L +A
Sbjct: 68 VDEAKSWMDMTDGTMDEVGNVMKRVKELLIYSADGAISPDDLKTMGSEIQELKNHLGTLA 127
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ TD + + + N + + + + +
Sbjct: 128 NQQINGKYIFAGTDTNKAPYDLTANGGKGDFVSTNSSPINLEVSQNVFVTSNINAQNIFN 187
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ ++ + +
Sbjct: 188 FPDNANNMFKALDNIITELNNGRSAAQFQP 217
Score = 45.5 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 38/113 (33%)
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+++ + S + + + + N + + I+ Q A
Sbjct: 171 SQNVFVTSNINAQNIFNFPDNANNMFKALDNIITELNNGRSAAQFQPAINQQYDKLLAER 230
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+G+ +R+ L + + + + + DADMA T L ++ A
Sbjct: 231 ASLGASVNRVELIAERLNTQEVGITGLLSKNEDADMAKVMTNLKTQESVHSAA 283
>gi|187926916|ref|YP_001893261.1| flagellin domain protein [Ralstonia pickettii 12J]
gi|241665245|ref|YP_002983604.1| flagellin domain protein [Ralstonia pickettii 12D]
gi|187728670|gb|ACD29834.1| flagellin domain protein [Ralstonia pickettii 12J]
gi|240867272|gb|ACS64932.1| flagellin domain protein [Ralstonia pickettii 12D]
Length = 273
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/264 (12%), Positives = 89/264 (33%), Gaps = 3/264 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN S++ Q L L+ +R+S+GLRV+ A D+AA +++A + + + +
Sbjct: 3 LSLNTNISSLQTQQALSQSQSALQTSLERLSTGLRVNSAKDDAAAYAVASSLTTKLNSQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
+ + + + + + + + ++ TD ++ E QL +
Sbjct: 63 QGIQNSNQALAYLQTSDSYLGQVENNLQRMRQLAVEANNGGLSTTDQANLDKEYQQLAAA 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ I +++NG + S+T ++ N + T
Sbjct: 123 NKSIETNANYNGNKLFDGSVTSTTFQYGQNAATDTTTVTNANLASFGTLSGTSVSTTANA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ L + ++ ++ + + + ++ A +
Sbjct: 183 TAAQAAIDTDLTNLKAARASLGAQQSGLNSTINTLTSSNTALSAAKSSMIDTDYAAETSN 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTT 262
+ + + A + +
Sbjct: 243 MTRQNILQQAGTAMLAQANSAPNS 266
Score = 75.2 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 52/139 (37%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + + L + + + + IDT +
Sbjct: 135 NKLFDGSVTSTTFQYGQNAATDTTTVTNANLASFGTLSGTSVSTTANATAAQAAIDTDLT 194
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
AA +G+ S ++ + + A+ ++D D A+E++ ++ QQ
Sbjct: 195 NLKAARASLGAQQSGLNSTINTLTSSNTALSAAKSSMIDTDYAAETSNMTRQNILQQAGT 254
Query: 434 QALSIVNNSTARILSLFRG 452
L+ N++ ILSL +G
Sbjct: 255 AMLAQANSAPNSILSLLKG 273
>gi|224534347|ref|ZP_03674925.1| flagellar hook-associated protein 3 [Borrelia spielmanii A14S]
gi|224514449|gb|EEF84765.1| flagellar hook-associated protein 3 [Borrelia spielmanii A14S]
Length = 424
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/404 (10%), Positives = 106/404 (26%), Gaps = 29/404 (7%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G R+ ++ + A + +D L+ IG S + A+ + ++++ K
Sbjct: 36 GKRIVKLRNDPTGVTHAIRLDTDIFKLNVYIKNIGTSKSNLRYAEGYLQSLTNILTRAKE 95
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
G ++ + ++ + L D ++ G + G+ S A V
Sbjct: 96 IAIQGASGTYEADDKKMISKEVNALLEDTVAIANAKGPDGYSIFSGTKIDSEAFKVTREN 155
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
K ++ + T+ + + +
Sbjct: 156 KISKISKDGEGPQIIKVEYNGNQAEKKTEVYNEVYMSNN----------------YPGNK 199
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + +T + + N + A ++ ++
Sbjct: 200 IFFVQNQNIISSTNTNGFAVKENTKIYIDNIEIGLTAGDTALDIVAKINESSAPVEASID 259
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ + + T T L
Sbjct: 260 PVLNSLSIKTTTPHQIWITEAEESNVLQTL-----------GILTKNNDTKLPPYNLASN 308
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
S+ I E+L ++ ID +K + +G+ +R+
Sbjct: 309 TEVRSRSIFDALIELRDALYNNKEELVGSRSLAEIDGSLKRLLISVADLGAKENRLDRSY 368
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ--LAVQA 435
+ I +++ + + D D+ T L+ Q L + A
Sbjct: 369 ERISKETADMKEDMVQYTDLDVTKAITNLNMASLAYQVSLGISA 412
>gi|217076646|ref|YP_002334362.1| flagellar hook-associated protein 3 [Thermosipho africanus TCF52B]
gi|217036499|gb|ACJ75021.1| flagellar hook-associated protein 3 [Thermosipho africanus TCF52B]
Length = 295
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 64/197 (32%), Gaps = 6/197 (3%)
Query: 11 MSASQKLRDINYNL---EVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M + L +I ++L + D++SSG VS +D+A + A + S L +
Sbjct: 7 MINERTLFNIQHSLYRISKLHDKLSSGKEVSYPSDDAVVATRASNISSRMRELKQFKRNV 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLRDIAR 124
+ V+I + + + +V IK I G + ++I SE+ +L+ L DIA
Sbjct: 67 EHTQNFVNIYDSTIQELTNVYHRIKELIVRGANGTNDAAEREAIASELEKLKEHLEDIAN 126
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ K + Y +
Sbjct: 127 TQLGGEYIFGGARSDLKPVENGKIQTPPDANIKRKVNAMGFTIEYGVTVYDVFKLENGKD 186
Query: 185 ERYGLLDRNHKIKVEPQ 201
+ D + ++
Sbjct: 187 AFTVIDDAINALREGNS 203
Score = 42.4 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 29/62 (46%)
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+IG+ S + L + + + + + + DAD+ T LS Q+ Q A+++ + V
Sbjct: 226 AQIGANSRTLELVSSRLTDIDTFMTEYLSKEQDADLTKVLTDLSMQQSVLQAALKSAAQV 285
Query: 440 NN 441
Sbjct: 286 LQ 287
>gi|254418876|ref|ZP_05032600.1| Bacterial flagellin C-terminus domain protein [Brevundimonas sp.
BAL3]
gi|196185053|gb|EDX80029.1| Bacterial flagellin C-terminus domain protein [Brevundimonas sp.
BAL3]
Length = 265
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 1/148 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI TN+ A A Q L + LE Q+R+++G++VS A D+ A +SIA ++ +
Sbjct: 1 MASINTNYGAAIALQNLNKTSSELERTQNRINTGMKVSSAKDSGAIFSIATSQRAAAASQ 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG-TDSKSIQSEITQLQSQL 119
AV +I G S VD+A A + K + S +E + +++
Sbjct: 61 DAVRSSIQRGQSIVDVALAAGDTITSALEEQKGLAVSIAGSTGAAQTSYLAEYNAIGTEI 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAK 147
G++F+G N + + + T
Sbjct: 121 ASALAGATFDGVNLYKANAAAITVQTGA 148
Score = 80.2 bits (195), Expect = 7e-13, Method: Composition-based stats.
Identities = 41/88 (46%), Positives = 60/88 (68%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+V+ +D+ I T+ G+ S + F+ ++DA+E GVG LVDAD+A ES +L+
Sbjct: 178 IVATVDSAITAFTSVLSDFGTKSKSLGRSITFVNKLQDALEAGVGNLVDADLAKESAKLT 237
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
ALQT+QQL VQALSI N+++ +LSLFR
Sbjct: 238 ALQTKQQLGVQALSIANSASQTLLSLFR 265
>gi|121611308|ref|YP_999115.1| flagellin domain-containing protein [Verminephrobacter eiseniae
EF01-2]
gi|121555948|gb|ABM60097.1| flagellin domain protein [Verminephrobacter eiseniae EF01-2]
Length = 83
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 31/66 (46%)
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445
S + D ++++ + + R++D D A+E+ L+ Q QQ ++ N
Sbjct: 18 SRALKTLIDNLQVISENLSASRSRILDTDFAAETANLARSQILQQAGAAMVAQANQLHQG 77
Query: 446 ILSLFR 451
+L+L R
Sbjct: 78 VLALLR 83
>gi|87242366|gb|ABD33722.1| flagellin [Bacillus thuringiensis serovar fukuokaensis]
Length = 241
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 3/127 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
+ +R+SSG ++ AAD+AA +IA M++ G L+ + S + A +
Sbjct: 1 DKMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVGARNTQDAMSALRTGDAAL 60
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+++ +++ T D S+ E L ++ IA ++FNG +L
Sbjct: 61 GSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEIDHIAGKTNFNGNAFLNKGT 120
Query: 139 GSSTASI 145
+I
Sbjct: 121 DGKDITI 127
Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/185 (11%), Positives = 49/185 (26%)
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
L + + S M + + N+ +
Sbjct: 57 DAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEIDHIAGKTNFNGNAFL 116
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
K + S + + TL D + ++ +
Sbjct: 117 NKGTDGKDITIQLSDASSDTMTIAAIDTKAITTATLATPTATGADKALNAASAPAQITAL 176
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
DT I+ A GS +R+ + + + ++ DADMA E + ++ +
Sbjct: 177 DTAIQNIADARATFGSQLNRLDHNLNNVTSQATNMASSASQIEDADMAKEMSNMTKFKIL 236
Query: 429 QQLAV 433
+ +
Sbjct: 237 NEAGI 241
>gi|170752157|ref|YP_001783303.1| hypothetical protein Mrad2831_6415 [Methylobacterium radiotolerans
JCM 2831]
gi|170659284|gb|ACB28335.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 405
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/451 (11%), Positives = 137/451 (30%), Gaps = 46/451 (10%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SI + + L+D + Q+R+++G V+ A DN + +Q + + +L
Sbjct: 1 MSSITLSAATRQNLLSLQDTAQLMSTTQNRLATGKTVNSALDNPTNFFTSQALDGRSASL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+++ D + G + A G++ ++S K+ + + + + + +
Sbjct: 61 NSLLDGVSNGIQSIQAANQGITSIQKLVSQAKSIASQALSTQLTTTGTAANAYSASTASQ 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + + S ++++A + + T
Sbjct: 121 TVLLTINGTSVSATVAASSSISSTVAALNSAVASASTSSSGSFGAGAIFSVDSTGTKIVL 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ +
Sbjct: 181 NAQADVEFQNSGSQTALGFTASG------------------------------------- 203
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A +T + S S ++ + N + ++ +
Sbjct: 204 ---------TTASTYGTAASTVVSSDLSISGVTQRASLASQYNNLLNQITQLASDASYNG 254
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + + + S + + + + +
Sbjct: 255 VNLIAGKGNDMNIKFNDTGSSNLNVASVDATSNGLGLSSITNSNSTSSQNGLGNFLLNSD 314
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + ++ + +AA +GS S + ++DF K + + ++ G L +AD+ E+
Sbjct: 315 VNKTLATLTNAGNSLNSAASALGSNLSVVQNRQDFSKQLINVLQTGSANLTNADLNQEAA 374
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
AL T+Q + + ALS+ N++ +L L R
Sbjct: 375 NSQALSTRQSMGISALSLANSAQQGVLQLLR 405
>gi|222084878|ref|YP_002543407.1| flagellin C protein [Agrobacterium radiobacter K84]
gi|221722326|gb|ACM25482.1| flagellin C protein [Agrobacterium radiobacter K84]
Length = 325
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 60/273 (21%), Positives = 113/273 (41%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+++ TN + +A LR +N +L VVQ +V+SG RV A+D+ YWS+A M+SD +L
Sbjct: 1 MSNVTTNRATSAALTVLRGVNKDLGVVQQQVTSGFRVGSASDDPTYWSMATTMRSDQSSL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S ++DA+GLG+SKVD A M + ++S I+ K+ + E GTD ++ ++I QL+ QL+
Sbjct: 61 STITDALGLGASKVDTASTAMDTVVSIVSQIRAKLVSAQEAGTDKSAVNTDIQQLKDQLQ 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + ++F+GENWL + + + + D D+S
Sbjct: 121 SVTQSAAFSGENWLYNTSTQADTQKSVISNFTRGSSGQISLVSINYDSSQTLMIDTADAS 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + ++ + + ++ ++
Sbjct: 181 RGLLTKNIDANTLGTSDGTSTARNYYLLAADSGTAPTDGTEISISDSTTDAELTDMINVT 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + + S
Sbjct: 241 NSILTSVTSADSTLGVMKSRIDDQSDYISKLSD 273
Score = 63.6 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 85/203 (41%)
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
V AA + N TS + + + R + I + + +S + T
Sbjct: 121 SVTQSAAFSGENWLYNTSTQADTQKSVISNFTRGSSGQISLVSINYDSSQTLMIDTADAS 180
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ + +T T+ + + + S + + +M++
Sbjct: 181 RGLLTKNIDANTLGTSDGTSTARNYYLLAADSGTAPTDGTEISISDSTTDAELTDMINVT 240
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
++ + T+A +G + SRI Q D+I + D ++ VG LVD +M S R SALQT
Sbjct: 241 NSILTSVTSADSTLGVMKSRIDDQSDYISKLSDGIKTSVGDLVDTNMEEASARQSALQTA 300
Query: 429 QQLAVQALSIVNNSTARILSLFR 451
QQ+ +Q+LSI N +++L L +
Sbjct: 301 QQMGIQSLSIANTMASKVLILLQ 323
>gi|241589580|ref|YP_002979605.1| flagellin domain protein [Ralstonia pickettii 12D]
gi|240868292|gb|ACS65951.1| flagellin domain protein [Ralstonia pickettii 12D]
Length = 273
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 88/263 (33%), Gaps = 3/263 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN S++ Q L LE R+S+GLRV+ A D+AA +++A + + + +
Sbjct: 4 SLNTNVSSLQTQQALSQSRSALETSLQRLSTGLRVNSAKDDAAAYAVASSLTTTLNSQTQ 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
S + A + M + + + ++ TD ++ E L S
Sbjct: 64 GIQNANNALSYLQTADSYMGQVENNLQRMRQLAVEANNGGLSTTDQANLDKEFQVLASAN 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++I +++NG + S+T ++ N + + +
Sbjct: 124 KNIQSNANYNGAKLFDGTVTSTTFQYGQNATTDVATISNANLSSFGTLSGTSVTSASNAT 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ L+ ++ ++ + + + +T A +
Sbjct: 184 AAQSKIDSDLVSLKAARANLGAQQSGLNSTISTLTSSNTALAAAKSTMIDTDYAAETSNM 243
Query: 240 DQAKGIATIPVPLPAAPAAPNTT 262
+ + + A A +
Sbjct: 244 TRQNILQQAGTAMLAQANAAPNS 266
Score = 73.6 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 49/134 (36%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
T ++T + S L+ + + S ID+ + AA
Sbjct: 140 GTVTSTTFQYGQNATTDVATISNANLSSFGTLSGTSVTSASNATAAQSKIDSDLVSLKAA 199
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+G+ S ++ + A+ ++D D A+E++ ++ QQ L+
Sbjct: 200 RANLGAQQSGLNSTISTLTSSNTALAAAKSTMIDTDYAAETSNMTRQNILQQAGTAMLAQ 259
Query: 439 VNNSTARILSLFRG 452
N + IL+L +G
Sbjct: 260 ANAAPNSILNLLKG 273
>gi|120244|sp|P02969|FLJJ_CAUCR RecName: Full=Flagellin fljJ; AltName: Full=29 kDa flagellin
Length = 276
Score = 82.1 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/106 (38%), Positives = 58/106 (54%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
TD + + +++ +D + A G IG+ + +I F+ + D +E G
Sbjct: 170 NTLTATDDILDPVNAAGVLTRLDATLSAVNQAVGNIGTQAKQIDAHNTFVAKLNDVLETG 229
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
VG LVDAD+A ES RL ALQ +Q L QALSI N + ILSLF+G
Sbjct: 230 VGNLVDADLAKESARLQALQVKQPLGAQALSIANGAPQIILSLFKG 275
Score = 63.6 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 42/222 (18%), Positives = 85/222 (38%), Gaps = 9/222 (4%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN A+ A Q L N +++ VQ R+++G +S A D AA WS + G +S
Sbjct: 3 LSVNTNQPALIALQNLNRTNDDMQAVQTRINTGEAISTAKDTAAVWS----HRPGAGDMS 58
Query: 62 AVSDAIGLGSSKVDIAKA--GMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQ 116
++ GS +D + D++ ++ K+ A + T +++ ++ L
Sbjct: 59 GLAREDEPGSGDIDRGRGPRAGESVSDLLKLMREKVVAAKDTSLTTTSRQALNADFQGLI 118
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
L + R ++F+G N L + + +A + G I + + L +
Sbjct: 119 KNLNQVLRSATFDGANLLDGSQAADMSFLADADAGQAITLTLQNLSLGGTINTLTATDDI 178
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
LD L + + + + ++
Sbjct: 179 LDPVNAAGVLTRLDATLSAVNQAVGNIGTQAKQIDAHNTFVA 220
>gi|150020230|ref|YP_001305584.1| flagellar hook-associated protein 3 [Thermosipho melanesiensis
BI429]
gi|149792751|gb|ABR30199.1| flagellar hook-associated protein 3 [Thermosipho melanesiensis
BI429]
Length = 295
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
Query: 11 MSASQKLRDINYNL---EVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M + L +I ++L + D++SSG +S +D+A + A + S L +
Sbjct: 7 MINERTLFNIQHSLYRISKLHDKLSSGKEISYPSDDAVIATRASNISSRIRELKQFKRNV 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLRDIAR 124
+ V+I + + + +V IK I GV + +SI E+ +L+ + DIA
Sbjct: 67 DHTQNFVNIYDSTIQELTNVYHRIKELIVRGANGVNDVAERESIAQELEKLKEHMEDIAN 126
Query: 125 GS 126
Sbjct: 127 TQ 128
Score = 41.3 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+IG+ S + L I + + + + + DAD+ T LS Q+ Q A+++ + V
Sbjct: 226 AQIGANSRTLELVNSRITDIDTFMTEYLSKEQDADLTKVLTDLSMQQSVLQAALKSAAQV 285
Query: 440 NN 441
Sbjct: 286 LQ 287
>gi|160878465|ref|YP_001557433.1| flagellar hook-associated protein 3 [Clostridium phytofermentans
ISDg]
gi|160427131|gb|ABX40694.1| flagellar hook-associated protein 3 [Clostridium phytofermentans
ISDg]
Length = 514
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/394 (7%), Positives = 97/394 (24%), Gaps = 14/394 (3%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA-VSDAIGLGSSKVDIAKAG 80
+L + + S+G ++ +++ A ++++ L+ I + +D+ ++
Sbjct: 25 NSLSKTEQQYSTGKKIQRPSEDPIVAVRALKLRTNLTELNQYYEKNIPDALAWMDLTESS 84
Query: 81 MSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENW--LR 135
+S ++++ I G D S+ + QL+ Q+ + + +
Sbjct: 85 LSNINEILTKIHTYCVNGANDTLTEEDRNSLAVNLNQLKDQIYQEGNTNYAGRYVFSGYK 144
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
TD + +G + + + +
Sbjct: 145 TDSSLVFSENTSKYNYLLTERLSGANLDVIQKSINSFDLSSYNPNAPWDTSFDEKPNYIT 204
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
++ + T + + A
Sbjct: 205 AHRLRLAYNNLKNLDDGQLKIEIADQDSDGNVILDGDGNRTYTEYSGIIESRLSTDEDAY 264
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV----AKV 311
T + + + DI V + + +D +
Sbjct: 265 TPPDGTIYFLADTGELILPEDVYQDFRDKVDIKVSYEKNSFVKNDLKPEHYFDCVQTDLT 324
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ + + R ++ + + H ++ + V +D +
Sbjct: 325 SDDLVERNFTKQNQEIRYEINFSQSMVVNTQGSDAITHNIGRTIDDIIFAVNSVIAVDKK 384
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
I + Q+ + + +
Sbjct: 385 ISEVNKMLAS----GNITEEQKTTLNQALEVLTA 414
>gi|295689340|ref|YP_003593033.1| flagellin domain-containing protein [Caulobacter segnis ATCC 21756]
gi|295431243|gb|ADG10415.1| flagellin domain protein [Caulobacter segnis ATCC 21756]
Length = 278
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 3/220 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN A+ A Q L N +++ VQ R+++GL +S A DNAA WSIAQ ++D AL
Sbjct: 3 LSVNTNQPALIALQNLNRTNDDMQSVQTRINTGLSISTAKDNAAIWSIAQEQRADMSALG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
AV ++ +S D+A A D++ ++ K+ A + T +S+ ++ +
Sbjct: 63 AVKMSLDRATSIADVALAAGESVSDLLKLMREKVVAAKDTSLTTTSRQSLNADFQGILKN 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L + + F+G N L + A +A + G I + + L +L
Sbjct: 123 LTQVINSAVFDGANLLDGSQTADMAFLADADAGQAITLGLQNLTLGGTINTLVATDDILT 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
S T L + + + S ++
Sbjct: 183 SVTAADVLTRLDATMSAVNQAIGNIGTQAKQIDAHSTFVA 222
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/106 (39%), Positives = 59/106 (55%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
TD + ++++ +D + A G IG+ + +I F+ + D +E G
Sbjct: 172 NTLVATDDILTSVTAADVLTRLDATMSAVNQAIGNIGTQAKQIDAHSTFVAKLNDVLETG 231
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
VG LVDAD+A ES RL ALQ +QQL QALSI N + ILSLF+G
Sbjct: 232 VGNLVDADLAKESARLQALQVKQQLGAQALSIANGAPQIILSLFKG 277
>gi|254485909|ref|ZP_05099114.1| flagellin domain protein [Roseobacter sp. GAI101]
gi|214042778|gb|EEB83416.1| flagellin domain protein [Roseobacter sp. GAI101]
Length = 270
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/127 (34%), Positives = 72/127 (56%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M A Q LR IN +L Q +S+G ++ A DN+A W+I+++M+SD AV D++ +G
Sbjct: 1 MVALQSLRSINRDLSATQSAISTGKDINSAKDNSAIWAISKVMESDVAGFDAVQDSLAVG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
S V +A AG + ++ + +K AG +D I +++ + +Q+ I GS FNG
Sbjct: 61 ESTVAVASAGAEQIVETLKEMKALAVAGQSETSDFAKIDADMQEKIAQITAITNGSQFNG 120
Query: 131 ENWLRTD 137
N L+ D
Sbjct: 121 VNLLKDD 127
Score = 67.5 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/89 (47%), Positives = 55/89 (61%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
I+ + A A +G+ + RI Q +F+ + DAV+ G+G LVDADM + S RL
Sbjct: 182 TAFDDIEAFLTVAIDGAAALGASAQRISDQGEFVSKLTDAVKSGIGSLVDADMEAASARL 241
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLFR 451
ALQTQQQL VQ+LSI N + ILSLFR
Sbjct: 242 QALQTQQQLGVQSLSIANQAPQTILSLFR 270
>gi|152206736|gb|ABD33721.2| flagellin [Bacillus thuringiensis serovar sumiyoshiensis]
Length = 240
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 23 NLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82
+ +R+SSG ++ AAD+AA +IA M++ G L+ + S + A +
Sbjct: 1 KMNTSMNRLSSGKSINSAADDAAGLAIATRMRAKEGGLNVGARNTQDAMSALRTGDAALG 60
Query: 83 KAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
+++ +++ T D S+ E L ++ IA ++FNG +L
Sbjct: 61 SVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEIDHIAGKTNFNGNAFLNKGTD 120
Query: 140 SSTASI 145
+I
Sbjct: 121 GKDITI 126
Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/185 (11%), Positives = 49/185 (26%)
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
L + + S M + + N+ +
Sbjct: 56 DAALGSVSNILLRMRDLATQASSGTNNDKDIASMDKEYQALAQEIDHIAGKTNFNGNAFL 115
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
K + S + + TL D + ++ +
Sbjct: 116 NKGTDGKDITIQLSDASSDTMTIAAIDTKAITTATLATPTATGADKALNAASAPAQITAL 175
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
DT I+ A GS +R+ + + + ++ DADMA E + ++ +
Sbjct: 176 DTAIQNIADARATFGSQLNRLDHNLNNVTSQATNMASSASQIEDADMAKEMSNMTKFKIL 235
Query: 429 QQLAV 433
+ +
Sbjct: 236 NEAGI 240
>gi|89214344|gb|ABD64484.1| flagellin [Bacillus thuringiensis serovar guiyangiensis]
Length = 219
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++S A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLSHASDNPANIAIMTRMHARASGMRVAIRNNEDVLSMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + + T
Sbjct: 61 QRMRDLAVQSANDTNSNKNRDSLNKEFQSLTEQISYIGETTEFNDLSVFDSQNHPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IGHTVNITKHIPPSPTQHGINIST 144
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 63/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ + T + + +
Sbjct: 2 HLATGKKLSHASDNPANIAIMTRMHARASGMRVAIRNNEDVLSMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+D + T T + + + + L
Sbjct: 62 RMRDLAVQSANDTNSNKNRDSLNKEFQSLTEQISYIGETTEFNDLSVFDSQNHPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNITKHIPPSPTQHGINISTEQEARAAIRKIEEALQNVSLHRADLGAMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|224532221|ref|ZP_03672853.1| flagellar hook-associated protein 3 [Borrelia valaisiana VS116]
gi|224511686|gb|EEF82092.1| flagellar hook-associated protein 3 [Borrelia valaisiana VS116]
Length = 424
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/404 (10%), Positives = 103/404 (25%), Gaps = 29/404 (7%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G R+ ++ + A + SD L+ IG S + + + ++++ K
Sbjct: 36 GKRIVKLRNDPTGVTHAIRLDSDIFKLNVYIKNIGTSKSTLRYTEGYLQSLTNILTRAKE 95
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
G ++ + ++ + L D ++ G + G+ S A V
Sbjct: 96 IAIQGASGTYEADDKKMISKEVNALLEDAVAIANAKGPDGYSIFSGTKIDSEAFKVTREN 155
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
K ++ + T+ +
Sbjct: 156 KISKISKDGEGPQIIKVEYSGNQAEKKTEVYNEVHIS----------------------- 192
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ S ++ + + + T +
Sbjct: 193 ----NNYPGNEIFFSQNQNIISSINTNGFTVKENTKIYIDNIEIGLTTGDTALDIVAKIN 248
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+SA + + + + + T L
Sbjct: 249 ESSAPVEASIDPILNSLSIKTTTPHQIWITEEKESNVLQTLGILTKNNDTKLPPYNLSSS 308
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
S+ I E+L ++ ID +K + +G+ +R+
Sbjct: 309 TEVRSRSIFDALIELRDTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSY 368
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ--LAVQA 435
+ I +++ + + D D+ T L+ Q L + A
Sbjct: 369 ERISKEAADMKEDMVQYTDLDVTKAITNLNMASLAYQVSLGISA 412
>gi|332533134|ref|ZP_08409003.1| flagellin A [Pseudoalteromonas haloplanktis ANT/505]
gi|332037416|gb|EGI73870.1| flagellin A [Pseudoalteromonas haloplanktis ANT/505]
Length = 261
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 54/144 (37%), Gaps = 3/144 (2%)
Query: 13 ASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSS 72
A+ L + + +++++G +V+ AAD+AA I + S G S
Sbjct: 7 ATNFLNQTQQTPKQLAEQLATGKKVNSAADDAAALQIIDRLTSQQDGYGQAVRNAYDGIS 66
Query: 73 KVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFN 129
+ ++ +S D +S I+ D ++Q E+ QLQSQ+ + +SF
Sbjct: 67 YSQVTESSLSGVNDAVSRIRELSLQAGNGALSDNDRAALQEEVVQLQSQITETFENASFG 126
Query: 130 GENWLRTDLGSSTASIAKSVIGSF 153
G+ S
Sbjct: 127 GKPLFDGQSVSFQVGPDAITTQKT 150
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 15/130 (11%), Positives = 40/130 (30%)
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
+ ++ + + + T + + + + D A
Sbjct: 132 DGQSVSFQVGPDAITTQKTTPSDGSFAAAIATIDISTQAGAQAAIDISDQASDEINAQRA 191
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
++G+ + + + ++ + R+ D D A +R ++ ++ N
Sbjct: 192 ELGAFQNTLASTIKGLGTQQENIVASQSRIQDTDYAQAVSRQASNDILTNASIALRGQAN 251
Query: 441 NSTARILSLF 450
S ILSL
Sbjct: 252 QSAESILSLL 261
>gi|323139668|ref|ZP_08074710.1| flagellin domain protein [Methylocystis sp. ATCC 49242]
gi|322395100|gb|EFX97659.1| flagellin domain protein [Methylocystis sp. ATCC 49242]
Length = 295
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 69/289 (23%), Positives = 110/289 (38%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SIL N SA++A Q LR+ L Q +S+GL++S AA+NA+ W+IA+ MKSD G L
Sbjct: 1 MASILVNPSAITALQSLRNTQSALNTTQKEISTGLKISSAAENASTWAIAESMKSDKGVL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S +SD++ S +++A A + AI VM+ IKN + + G D I + + QL SQL
Sbjct: 61 STISDSLSGAKSVLNVATAAVKSAISVMNDIKNAVAQAQQPGADQAKILTSLQQLGSQLS 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ ++F G N L S + IA G T+ ++ + +
Sbjct: 121 SVVSSATFTGLNVTDGSLTSPVSFIASYNNGGGTAASVVGTIDLTVTDLINTGGTGILEA 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T D + D + + + F
Sbjct: 181 AQATGSTAATDFTGLTAADLAAATIADTLSNADKAIADLTTYAAEIGATVARVSQQNEFI 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
A A N S + + + N + +
Sbjct: 241 DTMKDALTTGVSSLVDADMNEASTRLQALQTQQQLGVQSLSIANQNAQM 289
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/138 (36%), Positives = 67/138 (48%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+D T L + + + T T A + + +S D I
Sbjct: 158 VVGTIDLTVTDLINTGGTGILEAAQATGSTAATDFTGLTAADLAAATIADTLSNADKAIA 217
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
T A +IG+ +R+ Q +FI M+DA+ GV LVDADM STRL ALQTQQQL V
Sbjct: 218 DLTTYAAEIGATVARVSQQNEFIDTMKDALTTGVSSLVDADMNEASTRLQALQTQQQLGV 277
Query: 434 QALSIVNNSTARILSLFR 451
Q+LSI N + IL LF+
Sbjct: 278 QSLSIANQNAQMILKLFQ 295
>gi|242278418|ref|YP_002990547.1| flagellar hook-associated protein 3 [Desulfovibrio salexigens DSM
2638]
gi|242121312|gb|ACS79008.1| flagellar hook-associated protein 3 [Desulfovibrio salexigens DSM
2638]
Length = 402
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/426 (11%), Positives = 117/426 (27%), Gaps = 48/426 (11%)
Query: 15 QKLRDINYNLEVVQD---RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
Q + +++ +L + +V++ +++ +D+ A ++S + L +
Sbjct: 11 QSITNVSRSLADYMNVSNQVATQKKINAPSDDPAGMGNVVNLRSYDQTLEDYYNNTQYAM 70
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
S + A +S+A ++M ++K + G ++ Q+ +
Sbjct: 71 SLLGSADGLLSEASEIMISVKEQAEQGATGTYTAEQQQAMAVNMM--------------- 115
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
S A + ++ T + +D G LD
Sbjct: 116 ----GYQDSLLAIANSEIGDDYLFSGESTDTAPYEYVPGVTVTGDSPAKSDFAAFTGELD 171
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
++ D Y S +
Sbjct: 172 DPVIVEFTSDGTIGADSVDYRYSLDGGSTWLTG--------------------------T 205
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ P+TT A +A + + +NS+ + V
Sbjct: 206 MDGTAIPPDTTMELGDVSVEMNAGTAVTAYDSDGKTGGQFVVRNSLQYNGSDEAMAVGIS 265
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+T V++ + + + + I+ ++ A + ID
Sbjct: 266 ESTELDVNSVGSDIFGGVNPDTGEPFSEPNMFEAISDSIAYMWIGDEEATATTIETIDNG 325
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+G+ + + L R+ V + DAD + + LS +
Sbjct: 326 YNRMLIETSNVGAREEKADFTGQSLSLTRERVASAISDEEDADSTALTIELSRSEYIYNA 385
Query: 432 AVQALS 437
+ + S
Sbjct: 386 VLSSTS 391
>gi|310644333|ref|YP_003949092.1| flagellin-like protein [Paenibacillus polymyxa SC2]
gi|309249284|gb|ADO58851.1| Flagellin-like protein [Paenibacillus polymyxa SC2]
Length = 306
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 47/126 (37%), Gaps = 3/126 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N + L + + Q+++S+G +++ +D+ + + +S+ +
Sbjct: 3 VTNNMLSSQLLLNLNRNSERMNNTQNQMSTGRKLNKPSDDPVGITYSLRYRSELSSNEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKS---IQSEITQLQSQLR 120
+ S +D M +A +M ++ + I EI QL+ Q+
Sbjct: 63 QRNVDSAVSWLDFNDTVMDQAGQIMQRVRELTVQASTGTNPQSALDSINKEIGQLKEQMI 122
Query: 121 DIARGS 126
D+
Sbjct: 123 DVVNSQ 128
Score = 44.7 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 32/79 (40%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + ++ ID+++ ++G+ S+R+ L ++ + + + + DAD A
Sbjct: 214 DIKTSGDQLANIDSRMDKMLKVQSEMGAKSNRVELMQNRLSDLEVNLTDLQSKTEDADYA 273
Query: 417 SESTRLSALQTQQQLAVQA 435
+ ++ A
Sbjct: 274 ELLMNSKIQENIYNASLSA 292
>gi|89214324|gb|ABD64474.1| flagellin [Bacillus thuringiensis serovar iberica]
Length = 219
Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 45/144 (31%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++ ++++A+DN A +I M + + S + A+A + +++
Sbjct: 1 EHLATDKKLNNASDNPANVAIVTRMHARASGMRVAIHNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I + FN + T
Sbjct: 61 QRMRDLAVQSANGTNSNANRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 121 IDHTVNMTKHIPPSSTQHDIKIST 144
Score = 70.2 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 63/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 2 HLATDKKLNNASDNPANVAIVTRMHARASGMRVAIHNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ A + T T + + + L
Sbjct: 62 RMRDLAVQSANGTNSNANRDSLNKEFQSLTEQIGYIGETTEFNDLSVFDGQNRPVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 DHTVNMTKHIPPSSTQHDIKISTEQEARAAILKIEEALQSVSIHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNNQSMALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|300870814|ref|YP_003785685.1| periplasmic flagellar filament protein FlaB3 [Brachyspira
pilosicoli 95/1000]
gi|300688513|gb|ADK31184.1| periplasmic flagellar filament protein, FlaB3 [Brachyspira
pilosicoli 95/1000]
Length = 245
Score = 81.7 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 56/156 (35%), Gaps = 3/156 (1%)
Query: 36 RVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI 95
R++ A D+A+ ++++ M+S L + G S + + +++ ++M ++
Sbjct: 2 RINTAGDDASGLAVSEKMRSQYRGLQQATRNAQNGISFIQTTEGYLNETTNIMQRMRELA 61
Query: 96 TAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGS 152
+D IQ E+ QL +++ IA + FN N L + + IG+
Sbjct: 62 IQSANGIYSDSDRALIQVEVNQLVAEVDRIASQAEFNKMNMLTGRFAADAQTPMTFHIGA 121
Query: 153 FIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
+ L S +
Sbjct: 122 NMDQRVSVNIGAMTAANLQVGGDTPISISSVETANQ 157
Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/224 (11%), Positives = 59/224 (26%)
Query: 225 ATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGN 284
+ L+ A +S + S + +
Sbjct: 19 MRSQYRGLQQATRNAQNGISFIQTTEGYLNETTNIMQRMRELAIQSANGIYSDSDRALIQ 78
Query: 285 SDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTL 344
++ + I S + + + + + D ++ G
Sbjct: 79 VEVNQLVAEVDRIASQAEFNKMNMLTGRFAADAQTPMTFHIGANMDQRVSVNIGAMTAAN 138
Query: 345 NITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVE 404
+ + + + ID I+ A ++G++ +R+ + + +
Sbjct: 139 LQVGGDTPISISSVETANQALGRIDEGIQMVVAQRAELGAVQNRMESMVKSLMIATENTI 198
Query: 405 KGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ DADMA + Q QQ L+ N I+
Sbjct: 199 ASESVIRDADMAQAMVAYTREQILQQTGAAMLANANMKNQSIMR 242
>gi|89214202|gb|ABD64413.1| flagellin [Bacillus thuringiensis serovar kyushuensis]
Length = 219
Score = 81.7 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 41/109 (37%), Gaps = 3/109 (2%)
Query: 31 VSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMST 90
+++G ++++A+DN A +I + + + S + A+A + +++
Sbjct: 3 LATGKKLNNASDNPANVTIVTRIHARANGMRVAIRNNEGALSMLRTAEAALQAVTNILQR 62
Query: 91 IKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+++ + S+ E L Q+ I + FN
Sbjct: 63 MRDLAVQSANGTNSNKNRGSLNKEFQSLTEQISYIGETTEFNDLPVFGN 111
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/216 (10%), Positives = 60/216 (27%)
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ KK A+ + A + +A G+ A + T + + +
Sbjct: 4 ATGKKLNNASDNPANVTIVTRIHARANGMRVAIRNNEGALSMLRTAEAALQAVTNILQRM 63
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + T T + L
Sbjct: 64 RDLAVQSANGTNSNKNRGSLNKEFQSLTEQISYIGETTEFNDLPVFGNQKRLVTLDDIGH 123
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + + + + + + I+ ++ + +G++ +R+ + +
Sbjct: 124 TVNLTKHIPPSPTQHDIKISTEQEARVAIRKIEEALQNVSLHRADLGAMMNRLQFNIENL 183
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A+ R+ DADMA E + + ++A
Sbjct: 184 NSQSMALTDASSRIEDADMAQEMSNFLKFKLLTEVA 219
>gi|109899357|ref|YP_662612.1| flagellin-like [Pseudoalteromonas atlantica T6c]
gi|109701638|gb|ABG41558.1| flagellin-like protein [Pseudoalteromonas atlantica T6c]
Length = 267
Score = 81.7 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 70/181 (38%), Gaps = 6/181 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + ++ L+ + E + ++++SG +V+ AAD AA I + S
Sbjct: 2 INLNTESNASL--LQQVQQRQESIFEKLASGKKVNSAADGAAAQQIIDRLTSQVEGNRQS 59
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S +A++G+S D +S I+ +D ++IQ+E++QLQ +
Sbjct: 60 VTNAYDGVSLTQVAESGLSGINDDVSRIRELSVQAGNGILSDSDRQAIQAEVSQLQENIS 119
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ F G++ +D G+ I + T +D T
Sbjct: 120 QTIGQTEFGGKSL-LSDAGNIDFQIGANAGQKIGVATQDVAASLTDVLNVDLSTAQGAEE 178
Query: 181 T 181
Sbjct: 179 A 179
Score = 61.7 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 35/97 (36%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ EE ++ D + AA +G+ ++ + V R+ D D
Sbjct: 171 STAQGAEEALAVADEAAEFVGAARADLGATQNQFESAARNLTQSNVNVAAARSRIQDTDY 230
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
A + +A Q ++ + N ++LSL G
Sbjct: 231 AQATADSAAANMLGQASISVQAQANQQQGQVLSLLNG 267
>gi|167646846|ref|YP_001684509.1| flagellin domain-containing protein [Caulobacter sp. K31]
gi|167349276|gb|ABZ72011.1| flagellin domain protein [Caulobacter sp. K31]
Length = 279
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 64/139 (46%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ D+ ++ + I TD+ +++ +D +
Sbjct: 139 NGSEPSNITFLADADAATSITLNLQNLSLGGTINTLTATDSIATMTLASAVLTKLDASLS 198
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A G IGS + +I FI + D +E GVG LVDADMA ES RL ALQ +QQL
Sbjct: 199 AVNQAVGSIGSQAKQIEAHNTFIAKLNDVLETGVGNLVDADMAKESARLQALQVKQQLGA 258
Query: 434 QALSIVNNSTARILSLFRG 452
QALSI N + ILSLF G
Sbjct: 259 QALSIANKAPQIILSLFNG 277
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/139 (30%), Positives = 74/139 (53%), Gaps = 3/139 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN A+ A Q L N ++ VQ R+++GL +S A DNAA WSIAQ ++D AL+
Sbjct: 3 LSVNTNQPALIALQNLNKTNDDMAGVQSRINTGLAISSAKDNAAVWSIAQDQRADRSALN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQSQ 118
AV ++ +S D+A A D+++ ++ K+ A + + K++ ++ L
Sbjct: 63 AVKMSLDRATSITDVALAAGESVSDLLTQMREKVVAAKDTSLSTSSRKALNADFQGLLKN 122
Query: 119 LRDIARGSSFNGENWLRTD 137
L + ++F+G N L
Sbjct: 123 LNQVVNSATFDGANILNGS 141
>gi|158422976|ref|YP_001524268.1| flagellin [Azorhizobium caulinodans ORS 571]
gi|158329865|dbj|BAF87350.1| flagellin [Azorhizobium caulinodans ORS 571]
Length = 366
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 62/203 (30%), Positives = 99/203 (48%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI+TN++A A LR IN +L DRVS+G +++ AAD AAYW+I+ + SDNGAL
Sbjct: 15 MTSIITNNAASVALATLRSINDSLNTTNDRVSTGKKINSAADGAAYWNISTTLTSDNGAL 74
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV DAI L + V G+++ ++ ++TIK + + D S+Q I S ++
Sbjct: 75 GAVKDAINLDLASVKTTNTGVTQIMNSLNTIKQALVSAQSSTADRTSLQKNIANAVSDIK 134
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A + NG NWL D ++ + KS++ +F R +T ++
Sbjct: 135 SAASSAVVNGANWLSVDSSATGFNANKSLLANFSRTSGVVSVGSTTLDTGAFAVYDAKTN 194
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
T +D+ +
Sbjct: 195 GTATGTSSTIDKAVTAVATSATV 217
Score = 66.3 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 62/352 (17%), Positives = 117/352 (33%)
Query: 100 ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
+ + S + D ++ + + + A+ +
Sbjct: 15 MTSIITNNAASVALATLRSINDSLNTTNDRVSTGKKINSAADGAAYWNISTTLTSDNGAL 74
Query: 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
I+ L T + + + + +
Sbjct: 75 GAVKDAINLDLASVKTTNTGVTQIMNSLNTIKQALVSAQSSTADRTSLQKNIANAVSDIK 134
Query: 220 KKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
A +GA + +++ ++ + S T + + +V + T
Sbjct: 135 SAASSAVVNGANWLSVDSSATGFNANKSLLANFSRTSGVVSVGSTTLDTGAFAVYDAKTN 194
Query: 280 IRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGY 339
+ + TS TVA N TT + + +
Sbjct: 195 GTATGTSSTIDKAVTAVATSATVSGGLTVAVGTNAGNLKGFMDTTYSISGSVGGTTVAAF 254
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
+ +I A T + + + + + I + +G+ +R+ Q+ F + +
Sbjct: 255 TASIADIDISALTSSDVDLAKLSSYMKIVSATIDGLQNGSTALGTTQTRLTSQQSFAQSL 314
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D +G LVDA+M EST+L ALQTQQQLAVQ+LSI NNST+ I++LFR
Sbjct: 315 IDINTSSIGSLVDANMEEESTKLKALQTQQQLAVQSLSIANNSTSNIMTLFR 366
>gi|320538493|ref|ZP_08038356.1| flagellar hook-associated protein 3 [Treponema phagedenis F0421]
gi|320144664|gb|EFW36417.1| flagellar hook-associated protein 3 [Treponema phagedenis F0421]
Length = 407
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/419 (10%), Positives = 99/419 (23%), Gaps = 35/419 (8%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
LR+ L V ++++S ++ D+ + KS L +
Sbjct: 9 ALRNQESRLHRVNNQIASQRKIQQLRDDPLAAGHSVRYKSYLARLDRFEKNTQTLHDQYK 68
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
I++ M +++ M ++ A ++ ++ L+++ + + G + +R
Sbjct: 69 ISEGYMQSSLNAMQRLRELAVASANGTLTPDDMKKMAPEVDELLKELVQNGNAVGPDGVR 128
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
G+ + + V+ I + + + +
Sbjct: 129 VFSGTKSFTEPFEVVMGDIEGAGSAMIMQVRYNGSIDPKEVETDELSYLDANM------- 181
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
K + + A+
Sbjct: 182 ----------------------------AGNKVFWAEKQSLLSETDARNFVVQNDTSIEV 213
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
S + + + V T
Sbjct: 214 DGLSIPLIAGDNVYSIISKINDSGAAVKAYLDPVTNGLNIETTDARQIWLCDGENGNVLS 273
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ SG S+ I +++ +++ ID+ I
Sbjct: 274 TLGLIKEGQRPPYNLANSVRVSGGSLFDAAIAMRNALLTGDQESLGGKILGSIDSCIDNL 333
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+A + GS R + V R D D+ T L + Q +
Sbjct: 334 SARMAETGSRYERSEAILARLNTQIPNVTAAEAREADLDLTKAITDLKMFEYTHQATLS 392
>gi|323700467|ref|ZP_08112379.1| flagellar hook-associated protein 3 [Desulfovibrio sp. ND132]
gi|323460399|gb|EGB16264.1| flagellar hook-associated protein 3 [Desulfovibrio desulfuricans
ND132]
Length = 397
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/428 (8%), Positives = 103/428 (24%), Gaps = 50/428 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + ++ ++ + +S +V+ +D+ A + +L+
Sbjct: 3 ISTAQIYSLSLNQMNSALNDVTKLTIMNASQKQVNSPSDDPAGMGRIVELSGYGNSLTGY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
D G+ + A + A + ++ + + ++Q L +
Sbjct: 63 IDNCGVALDYLGTADDVLGTASETITAALELAEQASTETYTDEELDMMALEMQGYLDAL- 121
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
A V I + + +++D
Sbjct: 122 ------------------YAIANTQVGSDSIFAGDDTGDNAYEMGLGVTLSNDALAASDF 163
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
G +D ++ D Y+ S +G + +
Sbjct: 164 VSLTGEVDDTVAVRFTSSGTVGTDALDYEYSTDGGDTWTSATLAAGDTVLDLGDAQVELA 223
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + A S + D
Sbjct: 224 ASTAVTAADDDGGGSLFYLRPACVYTGSAKAMSVGISESTSVD----------------- 266
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+++ + + D G + ++ + A+ +
Sbjct: 267 --------------MNSVGSDIFGGVDPSTGQAYGSPNLFETLSDCIVHMQNGDSEAVAQ 312
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ + + A IG+ ++I + + L++ + + DAD L
Sbjct: 313 CLEDLGDCHETVETGAADIGARENKITYTQTSLSLVKSLTTNSISSIEDADATQLVVELE 372
Query: 424 ALQTQQQL 431
+
Sbjct: 373 QANYVYEA 380
>gi|163794172|ref|ZP_02188145.1| flagellin domain protein [alpha proteobacterium BAL199]
gi|159180786|gb|EDP65305.1| flagellin domain protein [alpha proteobacterium BAL199]
Length = 274
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 3/180 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN A + L +N L+V Q+RVS+GL+++ A D+A+ +SIAQ ++ + A+ A
Sbjct: 6 SINTNPGVFVALRTLNTVNRGLDVSQNRVSTGLKIAGALDDASNFSIAQGIRGELKAIGA 65
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
V+ + +A AG + +++ ++ K+T ++S+ QL SQ
Sbjct: 66 VTQGLNNAKGIGKVAIAGTTAVSNLLQDVRVKLTELSNEGITTAQRTILESDFNQLLSQA 125
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ + FNG N L + + + + + + + + L +
Sbjct: 126 ANFIDNAVFNGVNLLDSSSSNVNTLSNLTGGTLSLSFQDLRTTVNALAGSSFGSATLAQA 185
Score = 66.3 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/79 (44%), Positives = 49/79 (62%)
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A G +G+ + LQ F++ + DA E+G+G +VDAD+A ES +L+ALQ QQQL+
Sbjct: 196 SAVNTALGSLGAEVRALELQTTFLEQISDATEEGLGNIVDADLARESAKLTALQVQQQLS 255
Query: 433 VQALSIVNNSTARILSLFR 451
VQ L I N +L LFR
Sbjct: 256 VQTLGIANQRPQSLLGLFR 274
>gi|315657527|ref|ZP_07910409.1| flagellar hook-associated protein 3 [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315491999|gb|EFU81608.1| flagellar hook-associated protein 3 [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 327
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 50/129 (38%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T + T+ A + ++ L ++SSG R+S A+D+ A + ++ + A
Sbjct: 3 TRMTTSMMAGTTLSTIQRNFNRLADANKKLSSGKRMSFASDDPASSVSSMRLRKELAATE 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
I +S + + A M + + + + ++ S+S + QL+
Sbjct: 63 QYKRNISDANSWLATSDAAMQSVAERYTEARTLLINSIDGALGSQSQGALAAQLRKVAES 122
Query: 122 IARGSSFNG 130
I ++
Sbjct: 123 IMSQANATY 131
>gi|89093656|ref|ZP_01166603.1| flagellin [Oceanospirillum sp. MED92]
gi|89082052|gb|EAR61277.1| flagellin [Oceanospirillum sp. MED92]
Length = 268
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 60/145 (41%), Gaps = 3/145 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + S + I ++ + +++SG R++ +A + A + ++S+ +
Sbjct: 3 INPTGFSTSPYNQFNQIQNRIDENEKQLASGQRINSSAVDPAGLQVLIDLQSEVLGNNTA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S + IA G+++ D + I+ +D ++QSE L +R
Sbjct: 63 IRNSLDGVSALQIADGGVNQVNDSLQRIRELSIQSQNGILNDSDRAALQSEADALLEGIR 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASI 145
D S+FNG++ L D +
Sbjct: 123 DTLDSSTFNGQSLLAEDGQLRLQTG 147
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 37/87 (42%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ +D+ +G+IG+ +R+ + + + + R+ D D A + S
Sbjct: 180 ALDILDSAQDFLGTVSGEIGASQNRLDSTINNLSQSSLSQAESASRIGDTDYARAISERS 239
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLF 450
+ QQ++ + + N S +L+L
Sbjct: 240 SALIQQEVGIAIQAQANASRGLVLNLL 266
>gi|332305654|ref|YP_004433505.1| flagellin domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332172983|gb|AEE22237.1| flagellin domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 267
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 5/147 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + S+ L+ + E + ++++SG +V+ AAD AA I + +
Sbjct: 2 INLNTESNSSL--LQQVQQKQESIFEKLASGKKVNSAADGAAAQQIIDRLTTQVEGNRQS 59
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
G S +A+ G+S D +S I+ +D ++IQ+E+TQLQ +
Sbjct: 60 VANAYDGVSLTQVAEGGLSGINDDVSRIRELSVQAGNGILSDSDRQAIQAEVTQLQENIS 119
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
+ F G++ L + A
Sbjct: 120 QTIEQTEFGGQSLLTNNDSIEFQVGAN 146
Score = 63.2 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 34/97 (35%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ EE ++ D + AA +G+ ++ + + R+ D D
Sbjct: 171 STAQGAEEALAVADEAAEFVGAARADLGATQNQFESAARNLTQSNVNIAAARSRIQDTDY 230
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
A + +A Q + + N ++LSL G
Sbjct: 231 AQATADSAAANILGQASTSVQAQANQQQGQVLSLLNG 267
>gi|315654566|ref|ZP_07907472.1| flagellar hook-associated protein 3 [Mobiluncus curtisii ATCC
51333]
gi|315491030|gb|EFU80649.1| flagellar hook-associated protein 3 [Mobiluncus curtisii ATCC
51333]
Length = 327
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 50/129 (38%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T + T+ A + ++ L ++SSG R+S A+D+ A + ++ + A
Sbjct: 3 TRMTTSMMAGTTLSTIQRNFNRLADANKKLSSGKRMSFASDDPASSVSSMRLRKELAATE 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
I +S + + A M + + + + ++ S+S + QL+
Sbjct: 63 QYKRNISDANSWLATSDAAMQSVAERYTEARTLLINSIDGALGSQSQGALAAQLRKVAES 122
Query: 122 IARGSSFNG 130
I ++
Sbjct: 123 IMSQANATY 131
>gi|254443953|ref|ZP_05057429.1| Bacterial flagellin N-terminus domain protein [Verrucomicrobiae
bacterium DG1235]
gi|198258261|gb|EDY82569.1| Bacterial flagellin N-terminus domain protein [Verrucomicrobiae
bacterium DG1235]
Length = 270
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 40/86 (46%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+S + + I+ G+ S+R+ + + + ++ +E R++D D+A EST+L+
Sbjct: 184 LSTVTSAIQSVATLRATNGAQSNRLSFASEMLTVNKENLEAANSRIIDVDVAEESTQLAR 243
Query: 425 LQTQQQLAVQALSIVNNSTARILSLF 450
Q L N+ST L L
Sbjct: 244 YNILVQAGSSMLQQANSSTQIALKLL 269
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 74/205 (36%), Gaps = 4/205 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +A+SAS L N L+ +R+SSG ++ + AD+A +++ + + +A
Sbjct: 4 VINTNSAAISASNNLASSNAMLQRSLNRLSSGSKIVNPADDAGGLAVSMKLSATIKRNAA 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQL 119
V++ I S + A V+ + + TD + +E QL+ QL
Sbjct: 64 VNNNINNARSFLQTQDGAYQTATKVLDRMSELKVLADDVTKNSTDKSNYNTEFQQLKKQL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ +FNG + + + T + +S + D T +
Sbjct: 124 SAL-TSETFNGVSLFKAGSDTLTVATTESGGSTMTIDQPDLASQIGTTLLDGDTTTVTAL 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLK 204
+ + Q +
Sbjct: 183 NLSTVTSAIQSVATLRATNGAQSNR 207
>gi|89214334|gb|ABD64479.1| flagellin [Bacillus thuringiensis serovar malayensis]
Length = 219
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 45/113 (39%), Gaps = 3/113 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G ++++A+DN A +I M + + S + A+A + ++V+
Sbjct: 1 EHLATGKKLNNASDNPANVAIVTRMHARASGMHVAIRNNEDAISMLRTAEAALQTVMNVL 60
Query: 89 STIKNKITAGV---ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+++ + S+ E L Q+ I ++FN +
Sbjct: 61 QRMRDVAVQSANGINSNKNRDSLNKEFQSLAEQIGYIDETTAFNDLSVFDGQN 113
Score = 69.8 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 62/218 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + +A G+ A + T + +
Sbjct: 2 HLATGKKLNNASDNPANVAIVTRMHARASGMHVAIRNNEDAISMLRTAEAALQTVMNVLQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ I + T + + + L
Sbjct: 62 RMRDVAVQSANGINSNKNRDSLNKEFQSLAEQIGYIDETTAFNDLSVFDGQNRTVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + ++ + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNVTKHIPLSPTQHDINISTEQEARAAIRKIEEALQNVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSTALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|322640428|gb|EFY37082.1| flagellin [Salmonella enterica subsp. enterica serovar Montevideo
str. 531954]
Length = 65
Score = 81.3 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 26/65 (40%)
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+R + + R+ DAD A+E + +S Q QQ L+ N +
Sbjct: 1 NRFDSAITNLGNTVTNLNSARSRIEDADYATEVSNMSKAQILQQAGTSVLAQANQVPQNV 60
Query: 447 LSLFR 451
LSL R
Sbjct: 61 LSLLR 65
>gi|187918056|ref|YP_001883619.1| flagellar hook-associated protein FlgL [Borrelia hermsii DAH]
gi|119860904|gb|AAX16699.1| flagellar hook-associated protein 3 [Borrelia hermsii DAH]
Length = 423
Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/404 (10%), Positives = 108/404 (26%), Gaps = 30/404 (7%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G R++ D+ + A + SD L+ I K+ + + ++++ K
Sbjct: 36 GKRITSLRDDPTGVTHAIRLDSDIFKLNTYVKNINSAKGKLRYMEGYLQSLANILTRAKE 95
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
G ++ + + ++ I + +
Sbjct: 96 ITVQGANGTYEADNKKMIA----KEINAILEDVLAIAN---VKGADGYSIFAGTKINAEA 148
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ + + + +D + + ER + I + +
Sbjct: 149 FKITRANRINRLTQDRSETQIIRVDYNGNQAERTTEIYNGIYIPTNYPGSEIFFSQNHYI 208
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + + +F + + ++ T A I + + A T +
Sbjct: 209 TSSKNVNEFIVKENTKIYIDNIEITLTAGDTAADIIAKINESDAPVEATLDRVLNSIAIK 268
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ I + V T
Sbjct: 269 TTTPHQIWITEEGSTVLQDLG---------------------ILTQNNDTKEPPYNIANN 307
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
++ I N + E+L ++ ID + A +G+ +R+ L
Sbjct: 308 TEVRSRTIFDSLIDLRDNLEENREELIGSRSLAEIDESLNKIFATLADLGTKENRLDLSY 367
Query: 394 DFIKLMRDAVEKGVGRLVDADMASEST--RLSALQTQQQLAVQA 435
+ I ++ + + + D+ T +++L Q L V A
Sbjct: 368 ERISKEIMDMKDDMVKYTNLDVTKAITDLNMTSLAYQVSLGVSA 411
>gi|188589135|ref|YP_001920198.1| flagellin [Clostridium botulinum E3 str. Alaska E43]
gi|251779630|ref|ZP_04822550.1| flagellin [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|188499416|gb|ACD52552.1| flagellin [Clostridium botulinum E3 str. Alaska E43]
gi|243083945|gb|EES49835.1| flagellin [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 280
Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/159 (19%), Positives = 59/159 (37%), Gaps = 3/159 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N + + + N + +SSGL+++ A DN + +Q++K + +A
Sbjct: 3 LSHNMFSANIYNNYKKQLTNNSGAVNNISSGLKLNSAKDNPNKITQSQMLKIQVLSNAAA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
I +S + M + D +S IK D + +Q E+ L L
Sbjct: 63 KRNIEDTNSMIQTFDGAMQEMNDSLSRIKELTVQAGGGTLTIEDRQVVQKEVDSLTEHLD 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
+A+ + FNG + + G T+ I
Sbjct: 123 YMAKNTEFNGVKLINGEKGEVTSMIGGLQDEVTTLPKFD 161
Score = 76.7 bits (186), Expect = 8e-12, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 44/97 (45%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + +D+ I+ ++A K G+I R+ D I ++EK + DAD
Sbjct: 181 VTNQDNIGNSLELVDSAIQSVSSARSKYGAIQLRLEGTGDAITENSLSLEKSQSNIADAD 240
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+A E + S Q Q ++ ++ NN L++ +
Sbjct: 241 IAFEMLKFSESQILIQSSISLMAQSNNFPQDALNVLK 277
>gi|225548520|ref|ZP_03769568.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 94a]
gi|225370783|gb|EEH00218.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 94a]
Length = 424
Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/400 (9%), Positives = 102/400 (25%), Gaps = 27/400 (6%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G R+ ++ + A + +D L+ I S + + + ++++ K
Sbjct: 36 GKRIVKLRNDPTGVTHAIRLDNDIFKLNVYIKNIDTSKSNLRYTEGYLQSLTNILTRAKE 95
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
G +S ++ ++ + L D+ ++ G + G+ S A V
Sbjct: 96 IAIQGASGTYESDDKKTISKEVNALLEDVVAIANAKGPDGYSIFSGTKIDSEAFKVTREN 155
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
K ++ + T+
Sbjct: 156 KISKTSKDGAGPQIIKVEYNGNQAEKKTEVYNDIH------------------------- 190
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + ++ + + + +
Sbjct: 191 --MSNNYPGNVIFFLQNQNIISSINTNGFAVKENTKIYIDNIEIGLTAGDTALDIVAKIN 248
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+SA + + + + + T L
Sbjct: 249 ESSAPVEASIDPVLNSLSIKTTTPHQIWITEEKESNVLQTLGILTKNNDTKLPPYNLSSS 308
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
S+ I E+L ++ ID +K + +G+ +R+
Sbjct: 309 TEVRIRSIFDALIELRDTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSY 368
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ I +++ + + D D+ T L+ Q+++
Sbjct: 369 ERISKEAADMKEDMIQYTDLDVTKAITNLNMASLAYQVSI 408
>gi|89214220|gb|ABD64422.1| flagellin [Bacillus thuringiensis serovar wratislaviensis]
Length = 219
Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 45/142 (31%), Gaps = 3/142 (2%)
Query: 31 VSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMST 90
+++G ++++A+DN A ++ M + + S + A+A + +++
Sbjct: 3 LATGKQLNNASDNPANVALVTRMHARASGMHVAIRNNEDAISMLRTAEAALQIVTNILQR 62
Query: 91 IKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
+++ + S+ E L Q+ I + FN + T
Sbjct: 63 MRDLAAQSANGTNSNKNRASLNKEFQSLTEQIGYIGATTEFNDLFVFDGQIRPITLDDIG 122
Query: 148 SVIGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 123 HTVHMTNHIPPSPTQHDIKIST 144
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/218 (10%), Positives = 60/218 (27%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ K+ A+ + A + +A G+ A + T + +
Sbjct: 2 HLATGKQLNNASDNPANVALVTRMHARASGMHVAIRNNEDAISMLRTAEAALQIVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T T + L
Sbjct: 62 RMRDLAAQSANGTNSNKNRASLNKEFQSLTEQIGYIGATTEFNDLFVFDGQIRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVHMTNHIPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGAMMNRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSTALTDASSRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|262276409|ref|ZP_06054218.1| flagellar hook-associated protein FlgL [Grimontia hollisae CIP
101886]
gi|262220217|gb|EEY71533.1| flagellar hook-associated protein FlgL [Grimontia hollisae CIP
101886]
Length = 397
Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/423 (10%), Positives = 110/423 (26%), Gaps = 52/423 (12%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
L L+ QD +++G RV A D+ Q + + L D+I L ++
Sbjct: 16 NDLMRQQVKLQDNQDELATGKRVLTAGDDPVSSIYIQNFRQQDKQLDQYVDSITLARNRQ 75
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
A+ + A ++ + K K + + L+ + F
Sbjct: 76 TRAEIAIDDAEQLVDSAKRKTMEMINGSLSEDDRTAHRQDLKGLYDN------FMNLVNA 129
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+ + G+ S +S F R + + + D R +
Sbjct: 130 KDESGNFLFSGTQSSKQPFYR----------------DGALNVRYAGDSYHRTAQVAPAV 173
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+++ + + + + D A+ + V
Sbjct: 174 EVQTSDPGDEVFMTIKNPFGDYQPEYELNSGSLLLLAQAKNSNNTDNAEYAVSFTVDGAG 233
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
T G S + V +
Sbjct: 234 QTTYELTQDGNVVSSGV------------------------------YDPQTGVQWGTLS 263
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + + + + + + + ++ K
Sbjct: 264 LSFEGEMLDGDRIVLERQDTFNVFDAFKKGIELSYESIFDASATAELHQVTEQFSAAFKH 323
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
A ++G+ + + QE K + + + +G + D D ++ ++ Q + Q
Sbjct: 324 LNKARSEVGTRLTTLDRQESMHKDFKLVLNRSLGTMEDLDYSTAVIDMNENMLALQASQQ 383
Query: 435 ALS 437
A +
Sbjct: 384 AFA 386
>gi|116253011|ref|YP_768849.1| flagellin protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115257659|emb|CAK08756.1| Probable flagellin. Unrelated to other flagellins in 3841, function
unknown [Rhizobium leguminosarum bv. viciae 3841]
gi|262283899|gb|ACY40759.1| FlaH [Rhizobium leguminosarum bv. viciae]
Length = 337
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 65/287 (22%), Positives = 113/287 (39%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI S +A LRDIN N+ V Q+ +++G+RV A+DNA YWSIA ++DN A+SA
Sbjct: 7 SIYQRVSVDAALYVLRDINRNMTVTQNHITTGMRVEKASDNAVYWSIATTARTDNKAVSA 66
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
+ DA+G+ ++ + A G+ IDV+S IK K+ A E G D I EI QLQ QLR +
Sbjct: 67 IQDALGMAAATMGTAYTGVQSVIDVVSEIKAKLVAATEDGIDKNKINEEIKQLQEQLRSV 126
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ ++FN +NW+ ++ + D + + S
Sbjct: 127 SESATFNSDNWVVLTNDATPTQPRQIPASFIRNADGTISIGMLSYHIDNTPVGATTSKDA 186
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + V ++ +++K + ++
Sbjct: 187 RYLIDDRATGSGEYGVLTSAYFATELGAAQNYVLMTSKNGTTTGQVVISVTSSTTQGQIG 246
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
+ I+ + L + + + + I
Sbjct: 247 QMISVVDAALTQLTTVGSAFGALEKRINLQNDFATKLHDNITAGIGR 293
Score = 67.1 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 56/312 (17%), Positives = 102/312 (32%), Gaps = 1/312 (0%)
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ ++ ++ I + +R + T S
Sbjct: 25 NRNMTVTQNHITTGMRVEKASDNAVYWSIATTARTDNKAVSAIQDALGMAAATMGTAYTG 84
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
Q + D+ + + + + ++
Sbjct: 85 VQSVIDVVSEIKAKLVAATEDGIDKNKINEEIKQLQEQLRSVSESATFNSDNWVVLTNDA 144
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
T + + + I +G + T + TS G+ Y V
Sbjct: 145 TPTQ-PRQIPASFIRNADGTISIGMLSYHIDNTPVGATTSKDARYLIDDRATGSGEYGVL 203
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
T + + T + + + + +M+S +D + T
Sbjct: 204 TSAYFATELGAAQNYVLMTSKNGTTTGQVVISVTSSTTQGQIGQMISVVDAALTQLTTVG 263
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
G++ RI+LQ DF + D + G+GRLVDADM ES+RL ALQTQQQL +Q+L+I
Sbjct: 264 SAFGALEKRINLQNDFATKLHDNITAGIGRLVDADMEEESSRLRALQTQQQLGLQSLNIA 323
Query: 440 NNSTARILSLFR 451
N + + LF+
Sbjct: 324 NATYDTVRQLFQ 335
>gi|13560132|emb|CAC36221.1| flagelline [Treponema sp. OMZ804]
Length = 222
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 16/148 (10%), Positives = 40/148 (27%)
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
++ A+ + N + + + +
Sbjct: 75 EVDRIASHAQFNGMNLLTGRFAREAADNQLQLHVGANMDQSEKLFVGTMTALALGLTGGM 134
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ + + ID +K +G+ +R L + + + + ++
Sbjct: 135 QGGEGDMITISSVEGANMAIGTIDNALKQINKQRADLGAYQNRFELAYNGVAIAAENLQA 194
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAV 433
R+ DADMA + + Q Q
Sbjct: 195 AESRIRDADMAKQIVEYTKNQILMQSGT 222
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Query: 47 WSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGT 103
++++ M+S L+ I G S + + +++ D+M ++
Sbjct: 1 LAVSEKMRSQIRGLNQAGQNIQNGVSFIQATEGYLAETTDIMQRLRELAVQAANGIYSAE 60
Query: 104 DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTA 143
D IQ E++QL ++ IA + FNG N L A
Sbjct: 61 DRMQIQVEVSQLVDEVDRIASHAQFNGMNLLTGRFAREAA 100
>gi|298345980|ref|YP_003718667.1| flagellar hook-associated protein 3 [Mobiluncus curtisii ATCC
43063]
gi|304390262|ref|ZP_07372216.1| flagellar hook-associated protein 3 [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|298236041|gb|ADI67173.1| flagellar hook-associated protein 3 [Mobiluncus curtisii ATCC
43063]
gi|304326744|gb|EFL93988.1| flagellar hook-associated protein 3 [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 327
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 50/129 (38%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T + T+ A + ++ L ++SSG R+S A+D+ A + ++ + A
Sbjct: 3 TRMTTSMMAGTTLSTIQRNFNRLADANKKLSSGKRMSFASDDPASSVSSMRLRKELAATE 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
I +S + + A M + + + + ++ S+S + QL+
Sbjct: 63 QYKRNISDANSWLATSDAAMQSVAERYTEARTLLINSIDGALGSQSQGALAAQLRKVAES 122
Query: 122 IARGSSFNG 130
I ++
Sbjct: 123 IMSQANATY 131
>gi|240137731|ref|YP_002962203.1| hypothetical protein MexAM1_META1p1032 [Methylobacterium extorquens
AM1]
gi|240007700|gb|ACS38926.1| conserved hypothetical protein with putative Flagellin C-terminal
domain [Methylobacterium extorquens AM1]
Length = 399
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 63/452 (13%), Positives = 126/452 (27%), Gaps = 54/452 (11%)
Query: 1 MTS-ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M+S I + + L+D + Q+R+++GL+VS A D+ + AQ + + +
Sbjct: 1 MSSGITLSSATRQNLLSLQDTSALTATTQNRLATGLKVSSALDSPVNFFTAQNLSNRSTD 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQL 119
L + D I G + A G++ ++ + K+ + + +
Sbjct: 61 LGGLLDGISNGVQAIQAANQGITSIQKLIDSAKSTANQALSTQITTTGTAA--------- 111
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
F ++ + S
Sbjct: 112 -------------------------------TDFAASTTSATTVSFFVNGTSKTATIATS 140
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
ST L V ++ +T + A A A A
Sbjct: 141 STIDAAITSLNTAAGSTMFSKDTTGKKIVLNASSAVEFATTGSQTALGFDAGTGTATADK 200
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
S + + + + S
Sbjct: 201 YGTGNTVAGNSANLTISGVETRAKLAEQYNSLLTQITQLAKDSSFNGTNLISNGDPSNKL 260
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + + L S +G L+
Sbjct: 261 HIAFNEKDTSNLDVQGKDLTADGLKLTSITGNSGATANGQGNFLLDTDIKGT-------- 312
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ + + A+ GS S + ++ F K + + ++ G L +AD+ E+
Sbjct: 313 -----LTKLTSGSDTLRTASSTFGSNLSVVQNRQSFSKNLINVLDTGAANLTNADLNLEA 367
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
AL T+Q L + ALS+ N + IL L R
Sbjct: 368 ANSQALSTRQSLGISALSLANQAQQSILQLLR 399
>gi|150019109|ref|YP_001311363.1| flagellar hook-associated protein 3 [Clostridium beijerinckii NCIMB
8052]
gi|149905574|gb|ABR36407.1| flagellar hook-associated protein 3 [Clostridium beijerinckii NCIMB
8052]
Length = 327
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/325 (10%), Positives = 90/325 (27%), Gaps = 7/325 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I + + ++ N+ +Q+++SSG ++ A+DN + + + S+ A
Sbjct: 1 MPRITNSMLVANYLNNMKRNLGNMSTLQNQLSSGNSITRASDNPSTATRIMQLNSEIAAN 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ I ++ +D +S+A +V S I+ + I +
Sbjct: 61 KQYNSNIKDVTNWLDTTDTALSEAGNVFSRIRELMVKAGNGAYGKDEISNIK-------D 113
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I + + G+ + G+ KS + + +G + + T +
Sbjct: 114 EIVQKVAQLGDILNSSFDGNYIFGGTKSTSKPVVANSDGSISYLDKNGTAFTGTSGTAAD 173
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + ++ + + T S + + +
Sbjct: 174 PNAYTQINTKLTAEISTGVTIEYNQTSTNILEFTDTDSGTSVNASDVLKDIVNNLSNPTA 233
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
T N S + + + + + + D
Sbjct: 234 TNLSTVTGSDLTKMDYIIKNVQKCRSTVGAMQNRMDSAQATNEDQNYNMTSILSEVGDVD 293
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTL 325
+ + S +
Sbjct: 294 YTQKTMEYSVAQTVYTASLQTSAKV 318
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 24/301 (7%), Positives = 73/301 (24%)
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
++ + +++ + + + ++ N
Sbjct: 13 YLNNMKRNLGNMSTLQNQLSSGNSITRASDNPSTATRIMQLNSEIAANKQYNSNIKDVTN 72
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
+ + + +V + + +K G
Sbjct: 73 WLDTTDTALSEAGNVFSRIRELMVKAGNGAYGKDEISNIKDEIVQKVAQLGDILNSSFDG 132
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
++ + + S + + + G
Sbjct: 133 NYIFGGTKSTSKPVVANSDGSISYLDKNGTAFTGTSGTAADPNAYTQINTKLTAEISTGV 192
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T Y T + L+ + ++ + +N A N ++ +D IK
Sbjct: 193 TIEYNQTSTNILEFTDTDSGTSVNASDVLKDIVNNLSNPTATNLSTVTGSDLTKMDYIIK 252
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G++ +R+ + + + + + D D ++ S QT ++
Sbjct: 253 NVQKCRSTVGAMQNRMDSAQATNEDQNYNMTSILSEVGDVDYTQKTMEYSVAQTVYTASL 312
Query: 434 Q 434
Q
Sbjct: 313 Q 313
>gi|163850677|ref|YP_001638720.1| hypothetical protein Mext_1247 [Methylobacterium extorquens PA1]
gi|163662282|gb|ABY29649.1| conserved hypothetical protein; putative flagellin C-ter domain
[Methylobacterium extorquens PA1]
Length = 399
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 63/452 (13%), Positives = 126/452 (27%), Gaps = 54/452 (11%)
Query: 1 MTS-ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M+S I + + L+D + Q+R+++GL+VS A D+ + AQ + + +
Sbjct: 1 MSSGITLSSATRQNLLSLQDTSALTATTQNRLATGLKVSSALDSPVNFFTAQNLSNRSTD 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQL 119
L + D I G + A G++ ++ + K+ + + +
Sbjct: 61 LGGLLDGISNGVQAIQAANQGITSIQKLIDSAKSTANQALSTQITTTGTAA--------- 111
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
F ++ + S
Sbjct: 112 -------------------------------TDFAASTTSATTVSFFVNGTSKTASIATS 140
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
ST L V ++ +T + A A A A
Sbjct: 141 STIDAAITSLNTAAGSTMFSKDTTGKKIVLNASSAVEFATTGSQTALGFDAGTGTATADK 200
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
S + + + + S
Sbjct: 201 YGTGNTVAGNSANLTISGVETRAKLAEQYNSLLTQITQLAKDSSFNGTNLISNGDPSNKL 260
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + + L S +G L+
Sbjct: 261 HIAFNEKDTSNLDVQGKDLTADGLKLTSITGNSGATANGQGNFLLDTDIKGT-------- 312
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ + + A+ GS S + ++ F K + + ++ G L +AD+ E+
Sbjct: 313 -----LTKLTSGSDTLRTASSTFGSNLSVVQNRQSFSKNLINVLDTGAANLTNADLNLEA 367
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
AL T+Q L + ALS+ N + IL L R
Sbjct: 368 ANSQALSTRQSLGISALSLANQAQQSILQLLR 399
>gi|91225880|ref|ZP_01260849.1| flagellar hook-associated protein L [Vibrio alginolyticus 12G01]
gi|269965417|ref|ZP_06179536.1| flagellar hook-associated protein [Vibrio alginolyticus 40B]
gi|91189530|gb|EAS75806.1| flagellar hook-associated protein L [Vibrio alginolyticus 12G01]
gi|269829896|gb|EEZ84126.1| flagellar hook-associated protein [Vibrio alginolyticus 40B]
Length = 397
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 49/434 (11%), Positives = 112/434 (25%), Gaps = 52/434 (11%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T I + H+ S LR + Q++++SG ++ +D+ Q + L
Sbjct: 3 TRISSFHNYQSVQNDLRRQENKVHHNQEQLASGKKLLKPSDDPLAAHYIQNISQQQEQLQ 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
+I L ++++ + ++ A + K + ++ Q++ + +L +
Sbjct: 63 QYLSSIVLVRNRLENHEVNIANAENFADESKRLTMEMINGAFSAEDRQAK----KRELEE 118
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA F + + G+ + K F R
Sbjct: 119 IANN--FLNLVNSQDESGNYVFAGTKPKSQPFYR-------------------------- 150
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
D++ ++ + ++ KL +D
Sbjct: 151 ---------DKDGSVQYAGDDYQRKMKVSSMLEMPMNDPGSKLFMEIPNPFGDYQPNYDL 201
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
G + A + + + R G + + I
Sbjct: 202 QNGSELLLNKATNVDAKDDAAYRVTFVDMNNGKFGYQLERNGKVVDADEFSPEKGIEYKG 261
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ ++ + S S+ + +
Sbjct: 262 LKVHVKGQITPGDSIEIEKRAEFSIFDTFKDAMAWSDKSVS-----------DTSATAKL 310
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+M A G+ S + +QE + ++ K D D +
Sbjct: 311 HQMTEEFHAAFIHLNKARTDAGARLSTLDIQEQNHEDFNLSLAKAKSNFEDLDYSKAVIE 370
Query: 422 LSALQTQQQLAVQA 435
S Q + QA
Sbjct: 371 FSENSRALQASQQA 384
>gi|15594527|ref|NP_212316.1| flagellar hook-associated protein FlgL [Borrelia burgdorferi B31]
gi|221217535|ref|ZP_03589005.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 72a]
gi|226321500|ref|ZP_03797026.1| flagellar hook-associated protein 3 [Borrelia burgdorferi Bol26]
gi|2688081|gb|AAC66578.1| flagellar hook-associated protein 3 (flgL) [Borrelia burgdorferi
B31]
gi|221192598|gb|EEE18815.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 72a]
gi|226232689|gb|EEH31442.1| flagellar hook-associated protein 3 [Borrelia burgdorferi Bol26]
gi|312148539|gb|ADQ31198.1| flagellar hook-associated protein 3 [Borrelia burgdorferi JD1]
Length = 424
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/400 (9%), Positives = 101/400 (25%), Gaps = 27/400 (6%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G R+ ++ + A + +D L+ I S + + + ++++ K
Sbjct: 36 GKRIVKLRNDPTGVTHAIRLDNDIFKLNVYIKNIDTSKSNLRYTEGYLQSLTNILTRAKE 95
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
G +S + ++ + L D+ ++ G + G+ S A V
Sbjct: 96 IAIQGASGTYESDDKKMISKEVNALLEDVVAIANAKGPDGYSIFSGTKIDSEAFKVTREN 155
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
K ++ + T+
Sbjct: 156 KISKTSKDGAGPQIIKVEYNGNQAEKKTEVYNDIH------------------------- 190
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + ++ + + + +
Sbjct: 191 --MSNNYPGNVIFFLQNQNIISSINTNGFAVKENTKIYIDNIEIGLTAGDTALDIVAKIN 248
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+SA + + + + + T L
Sbjct: 249 ESSAPVEASIDPVLNSLSIKTTTPHQIWITEEKESNVLQTLGILTKNNDTKLPPYNLSSS 308
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
S+ I E+L ++ ID +K + +G+ +R+
Sbjct: 309 TEVRSRSIFDALIELRDTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSY 368
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ I +++ + + D D+ T L+ Q+++
Sbjct: 369 ERISKEAADMKEDMIQYTDLDVTKAITNLNMASLAYQVSI 408
>gi|323706356|ref|ZP_08117921.1| flagellar hook-associated protein 3 [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323534318|gb|EGB24104.1| flagellar hook-associated protein 3 [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 296
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 50/151 (33%), Gaps = 3/151 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N M L+ Q+ +S+G +VS +D+ + +K++ +A
Sbjct: 3 VTNNMLVMDFMNDYNKNLERLQKDQNMLSTGEKVSKPSDDPVAVASILRIKTEIARNNAY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQ---SEITQLQSQLR 120
+ S + + + + D++ + G +Q +++ QL+ Q+
Sbjct: 63 TKNTDDAKSWLSLTDTALGQIGDMLQNARELAVQGSNGTLTQSDMQSIAAQVDQLKQQII 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
+ + + S +
Sbjct: 123 QVGNTQYNGRYIFAGYKTDTKPFSDTSNGYA 153
Score = 47.8 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 27/208 (12%), Positives = 59/208 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
T +T K + Q + + + +
Sbjct: 62 YTKNTDDAKSWLSLTDTALGQIGDMLQNARELAVQGSNGTLTQSDMQSIAAQVDQLKQQI 121
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ I+ T SD + + ++ D +
Sbjct: 122 IQVGNTQYNGRYIFAGYKTDTKPFSDTSNGYAGDDGAIKFEIGAGGNTIQVNVTGDKVFD 181
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ SG S + + +N + A+ ++ ID Q++ + G+ ++RI L +
Sbjct: 182 VSSGTSQLLTVMDNLSNALKSGDNQAVSNIIGDIDNQLQNILSIRADAGAKANRIDLTAN 241
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRL 422
+ + + DAD+A T L
Sbjct: 242 RLSDDNYNFTSLLSKNQDADIAQVITNL 269
>gi|227876729|ref|ZP_03994838.1| hypothetical protein HMPREF0577_2139 [Mobiluncus mulieris ATCC
35243]
gi|306817676|ref|ZP_07451418.1| possible flagellar hook-associated protein 3 [Mobiluncus mulieris
ATCC 35239]
gi|227842626|gb|EEJ52826.1| hypothetical protein HMPREF0577_2139 [Mobiluncus mulieris ATCC
35243]
gi|304649490|gb|EFM46773.1| possible flagellar hook-associated protein 3 [Mobiluncus mulieris
ATCC 35239]
Length = 328
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 44/120 (36%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
A +++ L ++++SG R+ A+D+ A + ++ + A I
Sbjct: 1 MMANDTLANVQNNFQRLADANEKMASGKRMKFASDDPASSVSSMRLRKELAATEQYKRNI 60
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSS 127
S + A + M + K K+ V +S+ + L+ + I ++
Sbjct: 61 DDAQSWMQTADSAMDTVSKLYLHSKTKLINSVSGAMGKESLHALAADLRQNAQAIMTQAN 120
>gi|309779466|ref|ZP_07674227.1| flagellin FliC [Ralstonia sp. 5_7_47FAA]
gi|308921707|gb|EFP67343.1| flagellin FliC [Ralstonia sp. 5_7_47FAA]
Length = 273
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/264 (12%), Positives = 87/264 (32%), Gaps = 3/264 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN S++ Q L L R+S+GLRV+ A D+AA +++A + + + +
Sbjct: 3 LSLNTNISSLQTQQALSQSQSALHTSLQRLSTGLRVNSAQDDAAAYAVASSLTTTLNSQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
S + A + + + + + ++ TD ++ E +L +
Sbjct: 63 QGIQNSNQAMSYLQTADSYLGQVENNLQRMRQLAVEANNGGLSTTDQANLDKEYQKLATA 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
++I +++NG + S+T ++ N + +
Sbjct: 123 NKNIETNANYNGNKLFDGSVTSTTFQYGQNAATDVTSVSNANLSTFGTLSGTSVTSTANA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ L + ++ ++ + + ++ + +
Sbjct: 183 TAAQAAIDTDLTNLKAARANLGAQQSGLNSTINTLTSNNTALSAAKSSLIDTDYASETSN 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTT 262
+ + + A + +
Sbjct: 243 MTRQNILQQAGTAMLAQANSAPNS 266
Score = 74.4 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 52/139 (37%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + S L+ + + + IDT +
Sbjct: 135 NKLFDGSVTSTTFQYGQNAATDVTSVSNANLSTFGTLSGTSVTSTANATAAQAAIDTDLT 194
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
AA +G+ S ++ + + A+ L+D D ASE++ ++ QQ
Sbjct: 195 NLKAARANLGAQQSGLNSTINTLTSNNTALSAAKSSLIDTDYASETSNMTRQNILQQAGT 254
Query: 434 QALSIVNNSTARILSLFRG 452
L+ N++ ILSL +G
Sbjct: 255 AMLAQANSAPNSILSLLKG 273
>gi|223889254|ref|ZP_03623842.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 64b]
gi|223885287|gb|EEF56389.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 64b]
Length = 424
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/400 (9%), Positives = 101/400 (25%), Gaps = 27/400 (6%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G R+ ++ + A + +D L+ I S + + + ++++ K
Sbjct: 36 GKRIVKLRNDPTGVTHAIRLDNDIFKLNVYIKNIDTSKSNLRYTEGYLQSLTNILTRAKE 95
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
G +S + ++ + L D+ ++ G + G+ S A V
Sbjct: 96 IAIQGASGTYESDDKKMISKEVNALLEDVVAIANAKGPDGYSIFSGTKIDSEAFKVTREN 155
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
K ++ + T+
Sbjct: 156 KISKTSKDGAGPQIIKVEYNGNQAEKKTEVYNDIH------------------------- 190
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + ++ + + + +
Sbjct: 191 --MSNNYPGNVIFFLQNQNIISSINTNGFAVKENTKIYIDNIEIGLTAGDTALDIVAKIN 248
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+SA + + + + + T L
Sbjct: 249 ESSAPVEASIDPVLNSLSIKTTTPHQIWITEEKESNVLQTLGILTKNNDTKLPPYNLSSS 308
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
S+ I E+L ++ ID +K + +G+ +R+
Sbjct: 309 TEVRSRSIFDALIELRDTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSY 368
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ I +++ + + D D+ T L+ Q+++
Sbjct: 369 ERISKEASDMKEDMIQYTDLDVTKAITNLNMASLAYQVSI 408
>gi|13560130|emb|CAC36220.1| flagelline [Treponema sp. OMZ803]
Length = 222
Score = 80.9 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 14/114 (12%), Positives = 34/114 (29%)
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + + + + + + ID +K
Sbjct: 109 GANMDQSEKLFVGTMTAXALGLTGGMQGGEGDMITISSVEGANMAIGTIDNALKQINKQR 168
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R L + + + + ++ R+ DADMA + + Q Q
Sbjct: 169 ADLGAYQNRFELAYNGVAIAAENLQAAESRIRDADMAKQIVEYTKNQILMQSGT 222
Score = 70.5 bits (170), Expect = 6e-10, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Query: 47 WSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGT 103
++++ M+S L+ I G S + + +++ D+M ++
Sbjct: 1 LAVSEKMRSQIRGLNQAGQNIQNGVSFIQATEGYLAETTDIMQRLRELAVQAANGIYSAE 60
Query: 104 DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
D IQ E++QL ++ IA + FNG N L A
Sbjct: 61 DRMQIQVEVSQLVDEVDRIASHAQFNGMNLLTGRFAREAAB 101
>gi|308175272|ref|YP_003921977.1| flagellar hook-filament junction [Bacillus amyloliquefaciens DSM 7]
gi|307608136|emb|CBI44507.1| flagellar hook-filament junction [Bacillus amyloliquefaciens DSM 7]
gi|328555245|gb|AEB25737.1| flagellar hook-associated protein FlgL [Bacillus amyloliquefaciens
TA208]
gi|328913606|gb|AEB65202.1| flagellar hook-filament junction [Bacillus amyloliquefaciens LL3]
Length = 305
Score = 80.6 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 22/196 (11%), Positives = 67/196 (34%), Gaps = 3/196 (1%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
A ++ + + L+ +Q +VS+G +++ A+D+ ++ ++ +
Sbjct: 7 MIAKNSLRFIGSSYDKLDRLQQQVSTGKKITKASDDPVVAMKGMQYRTQLAQVNQYQRNV 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIAR 124
G + ++ +++ ++ D+M I++ + +++ EI QL+ QL +A
Sbjct: 67 SQGFTWLENSESSVNSETDIMGKIRDLMVQAKSDSNGETELKAIGTEIGQLKKQLVSVAN 126
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ T+ + ++ ++ I+ +
Sbjct: 127 TQVNGRYLFNGTNSDVPPITENADGTYTYNYENYTSASDVNINISNGAVLKVNSDPNSAF 186
Query: 185 ERYGLLDRNHKIKVEP 200
N +
Sbjct: 187 GGVAQNGDNVFEFLNS 202
Score = 42.8 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 31/287 (10%), Positives = 72/287 (25%), Gaps = 1/287 (0%)
Query: 150 IGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
G ++ + + + V ++ +
Sbjct: 5 QGMIAKNSLRFIGSSYDKLDRLQQQVSTGKKITKASDDPVVAMKGMQYRTQLAQVNQYQR 64
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
T + + QAK + L A S
Sbjct: 65 NVSQGFTWLENSESSVNSETDIMGKIRDLMVQAKSDSNGETELKAIGTEIGQLKKQLVSV 124
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + NSD+ + + ++ + V D
Sbjct: 125 ANTQVNGRYLFNGTNSDVPPITENADGTYTYNYENYTSASDVNINISNGAVLKVNSDPNS 184
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYN-EKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G ++ + A+ + ++++S ID A IG+ ++R
Sbjct: 185 AFGGVAQNGDNVFEFLNSLEASLSKGTLSEADSKQILSDIDGFTDKMNAEKSNIGARTNR 244
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ L + ++ EK + D +M + QT + A+
Sbjct: 245 LELIQTRLESQAATAEKVLSDNEDVEMEDVIVDYLSQQTVHKAALSV 291
>gi|154687655|ref|YP_001422816.1| flagellar hook-associated protein FlgL [Bacillus amyloliquefaciens
FZB42]
gi|154353506|gb|ABS75585.1| FlgL [Bacillus amyloliquefaciens FZB42]
Length = 305
Score = 80.6 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 22/196 (11%), Positives = 67/196 (34%), Gaps = 3/196 (1%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
A ++ + + L+ +Q +VS+G +++ A+D+ ++ ++ +
Sbjct: 7 MIAKNSLRFIGSSYDKLDRLQQQVSTGKKITKASDDPVVAMKGMQYRTQLAQVNQYQRNV 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIAR 124
G + ++ +++ ++ D+M I++ + +++ EI QL+ QL +A
Sbjct: 67 SQGFTWLENSESSVNSETDIMGKIRDLMVQAKSDSNGETELKAIGTEIGQLKKQLVSVAN 126
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ T+ + ++ ++ I+ +
Sbjct: 127 TQVNGRYLFNGTNSDVPPITENADGTYTYNYENYTGASDVNINISNGAVLKVNSDPNSAF 186
Query: 185 ERYGLLDRNHKIKVEP 200
N +
Sbjct: 187 GGVAQNGDNVFEFLNS 202
Score = 42.8 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 31/287 (10%), Positives = 71/287 (24%), Gaps = 1/287 (0%)
Query: 150 IGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
G ++ + + + V ++ +
Sbjct: 5 QGMIAKNSLRFIGSSYDKLDRLQQQVSTGKKITKASDDPVVAMKGMQYRTQLAQVNQYQR 64
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
T + + QAK + L A S
Sbjct: 65 NVSQGFTWLENSESSVNSETDIMGKIRDLMVQAKSDSNGETELKAIGTEIGQLKKQLVSV 124
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + NSD+ + + + + V D
Sbjct: 125 ANTQVNGRYLFNGTNSDVPPITENADGTYTYNYENYTGASDVNINISNGAVLKVNSDPNS 184
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYN-EKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+G ++ + A+ + ++++S ID A IG+ ++R
Sbjct: 185 AFGGVAQNGDNVFEFLNSLEASLSKGTLSEADSDQVLSDIDGFTDKMNAEKSNIGARTNR 244
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ L + ++ EK + D +M + QT + A+
Sbjct: 245 LELIQTRLESQAATAEKVLSDNEDVEMEDVIVDYLSQQTVHRAALSV 291
>gi|152997575|ref|YP_001342410.1| flagellar hook-associated protein 3 [Marinomonas sp. MWYL1]
gi|150838499|gb|ABR72475.1| flagellar hook-associated protein 3 [Marinomonas sp. MWYL1]
Length = 436
Score = 80.6 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/420 (10%), Positives = 114/420 (27%), Gaps = 11/420 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N +S+ + N + Q+++S+ + +DN S + + ++ L
Sbjct: 3 VTNNLIYGQSSRVIGQANEKILSAQEKISAQTDIVRPSDNPVGASQILMYEGNSNRLKIF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
++I + +S ++ + + D M + + I + + ++ +A
Sbjct: 63 DESIKMATSHLEYQEVALDSLNDSMDDAHSLLIQAQNDANTQADIDAIVQEVALITESMA 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ + G+ T + G G + + + DS
Sbjct: 123 ELMNSKSADGNYIFAGTDTQGPPFILDGQGRYQWAGNEGQKYAQISENMKIPVTDSGKKL 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + V V + A
Sbjct: 183 FQDIWTSRTFSAQLLAGDVSFSAKVENQGDFDKFMEDNYDPENPLSNVFTITTTPIVPAG 242
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ +++ ++ P
Sbjct: 243 NTPPVVADANLGADPKEDLDRQRAFDGT------PGTYSITNNLGEVVSSGLYTAGKPIT 296
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + S R ++ EI+ ++++ N + +A +
Sbjct: 297 FSGMSFLMRGAPGATAGISLDKPRRDNVLNEINDTLAVLSDNNSTKGQREAAFS-----D 351
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ I + + +GS + + +E+F + + R+ D+A+ +T LS
Sbjct: 352 ATTSIKNAQRMVSEGRSSVGSRLNILRDRENFSSANQLSNAVTQDRVGGLDIAAAATELS 411
>gi|197104851|ref|YP_002130228.1| flagellin FljM [Phenylobacterium zucineum HLK1]
gi|196478271|gb|ACG77799.1| flagellin FljM [Phenylobacterium zucineum HLK1]
Length = 282
Score = 80.6 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ TN AM A Q L N L Q R+++G R++ A DN A W+IAQ ++ + +L+A
Sbjct: 11 SVNTNVGAMIALQNLNATNNELTTTQARINTGKRIASAKDNGAIWAIAQNQRASSQSLNA 70
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQL 119
V +++ S VD+A + D++ +K K A + DS ++ + L+ QL
Sbjct: 71 VRESLQRSISTVDVAISAGESVSDLLLQMKEKALAASDTSLDSNSLSALNDDFKALRDQL 130
Query: 120 RDIARGSSFNGENWLRTDL 138
+ FNG N +
Sbjct: 131 AKAVSNAEFNGVNMVSASG 149
Score = 77.1 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 76/141 (53%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
V T + +S + + + A T + + + M+S I+T
Sbjct: 142 VNMVSASGVTIAALANSNGTSKITVAAQNLALGGGNVTVAATASIATQSSAAAMISTINT 201
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
I+ ++A K+G+ S + +F+ ++D+++ GVG LVDAD+A ES RL ALQT+QQ
Sbjct: 202 SIQNVSSALSKLGTGSKSLSSHLEFVNKLQDSIDAGVGNLVDADLAKESARLQALQTKQQ 261
Query: 431 LAVQALSIVNNSTARILSLFR 451
L +QALSI N S++ +L LFR
Sbjct: 262 LGIQALSIANQSSSILLGLFR 282
>gi|329895982|ref|ZP_08271240.1| Flagellar hook-associated protein flgL [gamma proteobacterium
IMCC3088]
gi|328922063|gb|EGG29426.1| Flagellar hook-associated protein flgL [gamma proteobacterium
IMCC3088]
Length = 504
Score = 80.6 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/288 (10%), Positives = 79/288 (27%), Gaps = 3/288 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T ++ +++ + +Q ++ SG ++ + +DN + + + S
Sbjct: 3 ISTGQFFRNSINQMQQQQAKVAQLQAQLGSGSQLVNPSDNPSKSASINRLTSAIERQDVF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ + +++ + + D+M + + D + + +EIT L+ +L
Sbjct: 63 ARNLNAVETRLSTEEVALRSVSDIMRRVNQLTISAASDTLTAVDRRIVAAEITGLRDELF 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+++ G S A + + D +V++ D + +
Sbjct: 123 NLSNTQDSFGNYIFAGSQSSEPAFVKDAYDRVQYNGDYSEVEVNVTDNRKMVINTIGTRA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+R G + + + TS
Sbjct: 183 FSQVDRDGGSAIFGSSFTSADTGSQQPSGWVVNNVQLVSGAAVAGFTSLVDDDYPTLNTV 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
T A S + + + + G
Sbjct: 243 SDNPAVTSSSFSSQVVADGVEAGEKSLEMTTTASLDNYGVIRGPVVTA 290
>gi|329890213|ref|ZP_08268556.1| flagellin fljK [Brevundimonas diminuta ATCC 11568]
gi|328845514|gb|EGF95078.1| flagellin fljK [Brevundimonas diminuta ATCC 11568]
Length = 274
Score = 80.6 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S++TN SA+ A Q L N L Q RV++GL+V A DNAA W+IAQ ++D AL +
Sbjct: 4 SVITNASALVALQNLNATNSKLAATQSRVNTGLKVQGAKDNAATWAIAQNQRADMSALES 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQL 119
V ++ +S D+A A + D++ ++ K K+ E L + L
Sbjct: 64 VKTSLNRATSLADVALAAGQQISDILVELRQKATAAADPSASAATRKAYDDEFQALLTSL 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
A +SF+GEN L ++ +A + I + + + + T ++
Sbjct: 124 GSFAANASFDGENILDGSSTTALDFLANADASETISMNRQNLTLAGLSLTGLDLTTETNA 183
Query: 180 ST 181
+
Sbjct: 184 TA 185
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 57/97 (58%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ ++ I+ + A A ++G+ S +I F+ + D++E GVG LVDADM
Sbjct: 178 TTETNATAGLTAIEAALTDANAKLAELGAQSKQIEKHTQFVTKLMDSLEVGVGNLVDADM 237
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
A ES RL ALQ QQQL QALSI N + ILSLF+G
Sbjct: 238 ARESARLQALQVQQQLGAQALSIANQAPQIILSLFKG 274
>gi|284989568|ref|YP_003408122.1| flagellar hook-associated protein 3 [Geodermatophilus obscurus DSM
43160]
gi|284062813|gb|ADB73751.1| flagellar hook-associated protein 3 [Geodermatophilus obscurus DSM
43160]
Length = 298
Score = 80.6 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 61/152 (40%), Gaps = 4/152 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +A L ++ +Q +++SG +S +D+ + A ++ D A+
Sbjct: 3 ITHRAVTQTALLGLNTNLSSVAKLQQQLTSGKLISAPSDSPTGTNKALQIRQDQSAVEQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS----EITQLQSQL 119
+ I G S +D +++A+ + ++ + G S S Q E+ L+ L
Sbjct: 63 AKNISDGQSWLDATDTALNEAVAQVQRVRALTVQAMNDGAVSTSSQRAIAVEVAALRESL 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
+A S + + GS+ S + +G
Sbjct: 123 LGVANSSINDRALFGGVTQGSTAYSADGTYVG 154
Score = 49.0 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 33/83 (39%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
A+ + +D + AA +G+ S+R+ ++ + + + D D+
Sbjct: 205 TAPDALSADLEQLDAALDRLLGAAASVGARSTRMEAAGQVNTDLQLTLASQLVAVEDIDL 264
Query: 416 ASESTRLSALQTQQQLAVQALSI 438
A LS + + A+QA +
Sbjct: 265 AKTIMELSQTEVGYKAALQATAQ 287
>gi|254560303|ref|YP_003067398.1| hypothetical protein METDI1833 [Methylobacterium extorquens DM4]
gi|254267581|emb|CAX23423.1| conserved hypothetical protein; putative Flagellin C-terminal
domain [Methylobacterium extorquens DM4]
Length = 399
Score = 80.6 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 63/452 (13%), Positives = 127/452 (28%), Gaps = 54/452 (11%)
Query: 1 MTS-ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M+S I + + L+D + Q+R+++GL+VS A D+ + AQ + + +
Sbjct: 1 MSSGITLSSATRQNLLSLQDTSALTATTQNRLATGLKVSSALDSPVNFFTAQNLSNRSTD 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQL 119
L + D I G + A G++ ++ + K+ + + +
Sbjct: 61 LGGLLDGISNGVQAIQAANQGITSIQKLIDSAKSTANQALSTQITTTGTAA--------- 111
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
F ++ + S
Sbjct: 112 -------------------------------TDFAASTTSATTVSFFVNGTSKTATIATS 140
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
ST L V ++ +T + A A A A
Sbjct: 141 STIDAAITSLNTAAGSTMFSKDTTGKKIVLNASSAVEFATTGSQTALGFDAGTGTATADK 200
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
S + + + + S
Sbjct: 201 YGTGNTVAGNSANLTISGVETRAKLAEQYNSLLTQITQLAKDSSFNGTNLISNGDPSNKL 260
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + + + + +L S +G L+
Sbjct: 261 HIAFNEKDTSNLDVQGKDLTADGLSLTSITGNSGATANGQGNFLLDTDIKGT-------- 312
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ + + A+ GS S + ++ F K + + ++ G L +AD+ E+
Sbjct: 313 -----LTKLTSGSDTLRTASSTFGSNLSVVQNRQSFSKNLINVLDTGAANLTNADLNLEA 367
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
AL T+Q L + ALS+ N + IL L R
Sbjct: 368 ANSQALSTRQSLGISALSLANQAQQSILQLLR 399
>gi|291613090|ref|YP_003523247.1| flagellin domain protein [Sideroxydans lithotrophicus ES-1]
gi|291583202|gb|ADE10860.1| flagellin domain protein [Sideroxydans lithotrophicus ES-1]
Length = 238
Score = 80.6 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/218 (16%), Positives = 63/218 (28%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN +A+ A L L+ Q R+SSGLR++ A D+ IA S +
Sbjct: 4 VINTNVAALFAGAALNKSALALQTAQQRLSSGLRINSAKDDPTGLVIATDYDSQIRGTNI 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
S + I + + + +++ +
Sbjct: 64 AIQGANNAISTAQTNDGYAGQIIANLQRLYEIAVQLGGTASGAETTALTAENARIAGLTT 123
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A + N S+ + +V + I D G V Y D T +T
Sbjct: 124 AATAVTVDGNGTTKTGVSAKITAPTNVTVAGITTDLGTVNTARSQYGADMATFGSAVATM 183
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
L +I + ++ + +
Sbjct: 184 QVTSVNLSAAYSRIMDTDYAAESTAMTRNNILQQAGSA 221
Score = 77.5 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 37/87 (42%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
V+ I T + A + G+ + +++ + R++D D A+EST ++
Sbjct: 152 VAGITTDLGTVNTARSQYGADMATFGSAVATMQVTSVNLSAAYSRIMDTDYAAESTAMTR 211
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
QQ L+ N + +L+L R
Sbjct: 212 NNILQQAGSAVLAQANQTPNSVLTLLR 238
>gi|89214380|gb|ABD64502.1| flagellin [Bacillus thuringiensis serovar thuringiensis]
Length = 219
Score = 80.6 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 44/144 (30%), Gaps = 3/144 (2%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++ A+DN A I M + + S + A+A + +++
Sbjct: 1 EHLATGKKLNHASDNPANIVIVTRMYARASGMRVAIRNNEDAISMLRTAEAALQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ T+ S+ E L + I + FN + T
Sbjct: 61 QHMRDFAIQSANGTNSNTNRDSLNKEFQSLTEPIGYIGETTEFNDLSVFDGQNRPITLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYY 169
I Q
Sbjct: 121 IGHTINMTKHIPPSPTQHDIKIST 144
Score = 64.0 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/214 (10%), Positives = 61/214 (28%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ KK A+ + A + + +A G+ A + T + + +
Sbjct: 2 HLATGKKLNHASDNPANIVIVTRMYARASGMRVAIRNNEDAISMLRTAEAALQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + + T T + + + L
Sbjct: 62 HMRDFAIQSANGTNSNTNRDSLNKEFQSLTEPIGYIGETTEFNDLSVFDGQNRPITLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +GS+ +R+ +
Sbjct: 122 GHTINMTKHIPPSPTQHDIKISTEQEARAAIRKIEEALQNVSLHRADLGSMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
+ A+ ++ DADMA E + +
Sbjct: 182 NLNSQSMALIDTASQVEDADMAQEISDFLKFKLL 215
>gi|187932691|ref|YP_001885037.1| flagellin [Clostridium botulinum B str. Eklund 17B]
gi|187720844|gb|ACD22065.1| flagellin [Clostridium botulinum B str. Eklund 17B]
Length = 284
Score = 80.6 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 57/137 (41%), Gaps = 3/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N + + + N + +SSGL+++ A DN + +Q++K + ++
Sbjct: 3 LSHNMFSANIYNNYKKQLTNNSKSVNNISSGLKLNSAKDNPNKITQSQMLKIQILSNASA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
I +S + M++ D + IK D K+IQ+EI L L
Sbjct: 63 KRNIEDTNSMIQTFDGAMAEMNDSLGRIKELTVQAGGGTLTDGDRKTIQNEIDVLTEHLD 122
Query: 121 DIARGSSFNGENWLRTD 137
+A+ + FNG + D
Sbjct: 123 YMAKNTEFNGVKLINED 139
Score = 76.3 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 44/97 (45%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
K + + IDT I+ ++A K G+I R+ D I ++EK + DAD
Sbjct: 185 VTNKDNIGNSLDIIDTAIQSVSSARSKYGAIQLRLEGTGDAISENSLSLEKSQSNIADAD 244
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+A E + S Q Q ++ ++ NN L++ +
Sbjct: 245 IAFEMLKFSESQILIQSSISLIAQSNNFPQDALNVLK 281
>gi|170757647|ref|YP_001782345.1| flagellar hook-associated protein 3 [Clostridium botulinum B1 str.
Okra]
gi|169122859|gb|ACA46695.1| flagellar hook-associated protein 3 [Clostridium botulinum B1 str.
Okra]
Length = 320
Score = 80.6 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 65/181 (35%), Gaps = 7/181 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A S + + NL+ ++ +++SG S + + A + + S A
Sbjct: 3 ITNNMMANSFMTDMNNNLENLDRIRQQLTSGKNFSKPSHDPAGVIRSMQLYSGIDANKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ I + +D+ + + + I++K+ G E L+ ++ I
Sbjct: 63 NKNISNVINWLDVTDTALDQIGKQLGKIRDKLEEAGNPGFGET----ERKALKDEVNGII 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
S ++ T G S + +G + +IDY ++ LD + D
Sbjct: 119 ASMS---QSLNTTFDGKYIFSGTRVTGKPTGVQKDGTTKNNSIDYVNRDGSMPLDPAGDE 175
Query: 184 T 184
Sbjct: 176 Y 176
Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ ID + ++G+ +R+ ++ K + + + + D D+ ++ +
Sbjct: 236 LGNIDKALDNVLRIRAEVGAKQNRMEAAKEMNKETNFNLHEILSNIEDIDLVEKNMEYA- 294
Query: 425 LQTQQQLAVQALSIVNNSTARILS 448
Q + + +L ++A+IL
Sbjct: 295 --ILQSVYISSL----QTSAKILQ 312
>gi|89214264|gb|ABD64444.1| flagellin [Bacillus thuringiensis serovar graciosensis]
Length = 219
Score = 80.6 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 20/152 (13%), Positives = 49/152 (32%), Gaps = 3/152 (1%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +++G +++A+DN A +I M + G + S + A+A + +++
Sbjct: 1 EHLATGKNLNNASDNPANIAIVTRMHARAGGMRVAIRNNEDAISMLRTAEASLQTVTNIL 60
Query: 89 STIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
+++ + S+ E L Q+ I ++FN + + T
Sbjct: 61 QRMRDVAVQSANGTNSNKNRDSLNKEFQSLAEQIGYIDETTAFNDLSVFNGQNRTVTLDD 120
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ Q +
Sbjct: 121 IGHTVNVTKHIPPSPTQHDINISTEQETRAAI 152
Score = 69.8 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 21/218 (9%), Positives = 61/218 (27%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ K A+ + A + +A G+ A + T + + + +
Sbjct: 2 HLATGKNLNNASDNPANIAIVTRMHARAGGMRVAIRNNEDAISMLRTAEASLQTVTNILQ 61
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + T + + + L
Sbjct: 62 RMRDVAVQSANGTNSNKNRDSLNKEFQSLAEQIGYIDETTAFNDLSVFNGQNRTVTLDDI 121
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + + + + + + I+ ++ + +G++ +R+ +
Sbjct: 122 GHTVNVTKHIPPSPTQHDINISTEQETRAAIRKIEEALQNVSLHRADLGAMINRLQFNIE 181
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A+ R+ DADMA E + + ++A
Sbjct: 182 NLNSQSTALTDAASRIEDADMAQEMSDFLKFKLLTEVA 219
>gi|156973595|ref|YP_001444502.1| flagellar hook-associated protein FlgL [Vibrio harveyi ATCC
BAA-1116]
gi|156525189|gb|ABU70275.1| hypothetical protein VIBHAR_01298 [Vibrio harveyi ATCC BAA-1116]
Length = 396
Score = 80.6 bits (196), Expect = 6e-13, Method: Composition-based stats.
Identities = 47/434 (10%), Positives = 112/434 (25%), Gaps = 53/434 (12%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T I + H+ S LR + Q++++SG +++ +D+ Q + L
Sbjct: 3 TRISSFHNYQSVQNDLRRQENKVHHNQEQLASGKQLTKPSDDPLATHYIQSIGQQEEQLR 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
DAI L ++++ + ++ A + K + + ++ + +L +
Sbjct: 63 QYLDAIVLVRNRLENQEVAVANAEQFVDESKRLSMEMINGAFSPEDRAAK----KRELEE 118
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA F + + G+ + K F RD +G + Y D + ++
Sbjct: 119 IANN--FMALANSQDESGNYVFAGTKPKTQPFFRDSDGS-----VVYTGDDYQRKMKIAS 171
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ ++ + + + S + K
Sbjct: 172 NIEMGINYPGNKVFSEISNPFGDFEPQYGLQEGSELLLGQATDESKSDSNYKVTFVDMSN 231
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
K + + + ++ + + R T
Sbjct: 232 GKFGYQLEKDGGIVQVDDYSPIDGIQYEGVNIQLKGQVSAGDSITLEPRQTFSIFDAFKE 291
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
++ + +
Sbjct: 292 TMQW------------------------------------------SESSVSDASATAKL 309
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+M +G+ S + +QE + ++ K D D +
Sbjct: 310 HQMTEEFQAAFVHMNKVRTDVGAKLSTLDIQEQNHEDFNLSLAKAKSNFEDLDYSKAVIE 369
Query: 422 LSALQTQQQLAVQA 435
S Q + QA
Sbjct: 370 FSENSRALQASQQA 383
>gi|325295213|ref|YP_004281727.1| flagellar hook-associated protein 3 [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065661|gb|ADY73668.1| flagellar hook-associated protein 3 [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 316
Score = 80.2 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/273 (11%), Positives = 73/273 (26%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
R + +L + +SSG ++ +DN + A K L+ + I L ++++ A
Sbjct: 17 RKRSVDLTRKTEELSSGKKLLYPSDNPVDAARALRFKKLISTLNQYNRNIDLAKTQLETA 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
++ + I+V + KI + G ++ + L+ G S
Sbjct: 77 ESALDTIINVSQEARAKIVQIMNTGVINEDEAKTLKDYFENLKSYIIGQSNTKVADHYIF 136
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
G T + + G++ + + + +L K
Sbjct: 137 GGVKTQTKPFNDDGTYQGETQETTIAIANGVETNTTFNGKEYLGVNYSSNKILIVEVIDK 196
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ + + + + + L A + A
Sbjct: 197 IISLIDSGNLQQLNSITIDVDLTNDSTNNPTSIKLLDAFDKGLSKIMEYRSIIGTKIGTA 256
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVR 290
+ S S + I
Sbjct: 257 ENLKVQNENMRLHYSNLVSKIEDADYTAAIAEY 289
Score = 44.0 bits (101), Expect = 0.059, Method: Composition-based stats.
Identities = 22/199 (11%), Positives = 47/199 (23%), Gaps = 5/199 (2%)
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
NT + + G + TT T +
Sbjct: 120 SYIIGQSNTKVADHYIFGGVKTQTKPFNDDGTYQGETQETTIAIANGVETNTTFNGKEYL 179
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+Y + K + + T+ +++ D +
Sbjct: 180 GVNYSSNKILIVEVIDKIISLIDSGNLQQLNSITIDVDLTNDSTNNPTSIKLLDAFDKGL 239
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
IG+ + + MR V ++ DAD + +T +
Sbjct: 240 SKIMEYRSIIGTKIGTAENLKVQNENMRLHYSNLVSKIEDADYTAAIAEYEKAKTAYEAL 299
Query: 433 VQALSIVNNSTARILSLFR 451
+ + + LSL +
Sbjct: 300 LATIQQTKD-----LSLLK 313
>gi|195953644|ref|YP_002121934.1| flagellin domain protein [Hydrogenobaculum sp. Y04AAS1]
gi|195933256|gb|ACG57956.1| flagellin domain protein [Hydrogenobaculum sp. Y04AAS1]
Length = 605
Score = 80.2 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 51/409 (12%), Positives = 121/409 (29%), Gaps = 26/409 (6%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI N+ A+ A+ L+ N N+ +S+GLR+ AAD+ A IA + + AL
Sbjct: 1 MLSINFNYGALVANNALQQANQNVTNDITHISTGLRILSAADDPAGLFIADQLHTLGTAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQS 117
G S +A +S+ + ++T+ + ++Q++I+ L
Sbjct: 61 GQGYLNTQQGYSLAQVADGQLSQIYNTLNTMYTYAVNAGNSTNNINSAGALQNQISALAQ 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIA-----------------------KSVIGSFI 154
++ I ++FNG+ + +
Sbjct: 121 SIKQIVNTTTFNGKALFNGNFVNQAIQFGGQAGQYINISIGNLSIERMGAAIAQTGDFTN 180
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
++ Y + +++ T + + + + +
Sbjct: 181 VNNGSTAANIMAYYSGSGPINVSTTASATTYDGANTTASQTVVTSDVLFDGNKQLFINGN 240
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+++ A G T T + S + S+
Sbjct: 241 EVVASAYASATNAYLDANIIAGNINSVFNGTVTAQASNTLQGTEAFGTIQVASSATVSIV 300
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
S + + + T S ++ V V T V ++ +L +
Sbjct: 301 ISRQVEQSSTVGVGFTSLTNASGQAEQLANGQYVGTVSQTINLVGGQTYSLQNIVSAING 360
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+ + + + Y + ++ ++ + +++ G
Sbjct: 361 VATNTGVYATTDSTGQYLQLYTTDGSTFQINVNVNNALGASSSQQATYG 409
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 41/138 (29%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ S ++ + + + + I
Sbjct: 468 VFNTQVSNSYINGYSSTNTTTVNGVQTAGYNYFVKDLLAINVTNTQGANQAQIILQNAIN 527
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
++GS+ ++ + + + + D +++ T+ T QQ A+
Sbjct: 528 YVDTIRAQVGSVMQQMQTLANGDQTGQTNTLNAEAAIRDLNVSQAMTQYQNDNTLQQSAL 587
Query: 434 QALSIVNNSTARILSLFR 451
L+ N ++L+LFR
Sbjct: 588 AMLAQANAVPQQLLTLFR 605
>gi|330502741|ref|YP_004379610.1| flagellar hook-associated protein FlgL [Pseudomonas mendocina
NK-01]
gi|328917027|gb|AEB57858.1| flagellar hook-associated protein FlgL [Pseudomonas mendocina
NK-01]
Length = 562
Score = 80.2 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 27/198 (13%), Positives = 62/198 (31%), Gaps = 7/198 (3%)
Query: 8 HSAMSASQK----LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
S++ A L NL Q+++SSG R+ AD+ ++ L+
Sbjct: 5 ISSIQAFNNGVSGLGRNYSNLIRTQEQISSGNRILTPADDPVASVRLLQLEQQQAMLTQY 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ + + + + ++ VM ++ D KSI E+ + +++L
Sbjct: 65 KNNLVAADNSLVQEETTLNSINTVMQRVRELAVRAGGGALSADDRKSIAKELEEREAELL 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++ + GE +LG + + D G+ +
Sbjct: 125 NLMNSQNARGEYLFSGNLGKTAPFVRNPDGTYSYMGDEGQRSLQVASSTNVAINDNGKRL 184
Query: 181 TDGTERYGLLDRNHKIKV 198
+ + +
Sbjct: 185 FENVTNANRTVSDSGVNN 202
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 39/389 (10%), Positives = 89/389 (22%), Gaps = 20/389 (5%)
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA---- 123
G + +A + D + +T +DS + IA
Sbjct: 161 DEGQRSLQVASSTNVAINDNGKRLFENVTNANRTVSDSGVNNPALPSPPLPSTTIAPVPA 220
Query: 124 -RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD---- 178
F + S + + E
Sbjct: 221 DEQRVFMSPGVVEDGRAFSADFRNGEPYSLAFVSGSEFRIYDASGADVTSEIPGGGKIDP 280
Query: 179 -SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+S+ T + L + ++ ++ +T T L++A
Sbjct: 281 LTSSGNTINFRGLRFQLDVVLKEGDNPQDLDNLLADIQPPATAGTPGVGTHSFTLQSAPT 340
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGT----------SGSKSPSVAASATYIRMGNSDI 287
F + + + A N + + A + ++ +
Sbjct: 341 EFAVTRSSTNTSAAVISGGAIVNQGVFDGQFPTSGVVVRFTNANDYEVYAQPMGPNSTVL 400
Query: 288 WVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNIT 347
T + Y D ++ TL +
Sbjct: 401 TTGTVTAPYPATFDVYGAQFTMSGPAAAAGGDEFGVQPQFQEQRSILDSIARLRQTLESS 460
Query: 348 RHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
+ + + + D + +IG+ + I + + + +
Sbjct: 461 PTSPAGNLAIRDEVAIALKNFDNGVANVDEVRTEIGARRNLIDTTQIDNEDVTLVNKSVQ 520
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQAL 436
L + D A +RLS + A Q+
Sbjct: 521 AELRELDYAEALSRLSFQTIILEAAQQSY 549
>gi|284041492|ref|YP_003391832.1| flagellar hook-associated protein 3 [Conexibacter woesei DSM 14684]
gi|283945713|gb|ADB48457.1| flagellar hook-associated protein 3 [Conexibacter woesei DSM 14684]
Length = 301
Score = 80.2 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 50/144 (34%), Gaps = 3/144 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +A + + L+ L +Q ++SSG ++ +D+ A + + L
Sbjct: 5 ITAQMTARTTVRDLQGDLAQLSQLQRKMSSGKEITKPSDDPYGTGRALGLHGEVAGLQQY 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ G++ ++ + + K D ++ ++ + + SE+ QL ++
Sbjct: 65 QKNVDDGTAWLNASDTALGKIGDAINRVRELLIRVGTDSAGQAARDAAASEVDQLIETIK 124
Query: 121 DIARGSSFNGENWLRTDLGSSTAS 144
A + T
Sbjct: 125 QEANIQYAGRYVFAGTATDRQPYQ 148
Score = 45.5 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 32/89 (35%), Gaps = 6/89 (6%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ +D + +G+ ++R+ + + + + + + + ++ DAD +
Sbjct: 217 IARLDANVDVLNGIRADVGARTNRMEIADGRLSSLEENSIELLSKVEDADTVKTLIEYTT 276
Query: 425 LQTQQQLAVQALSIV--NNSTARILSLFR 451
QQ A N ++ R
Sbjct: 277 ----QQAAYNMALRAGSNVVQNSLMDFLR 301
>gi|218249249|ref|YP_002374710.1| flagellar hook-associated protein 3 [Borrelia burgdorferi ZS7]
gi|218164437|gb|ACK74498.1| flagellar hook-associated protein 3 [Borrelia burgdorferi ZS7]
Length = 424
Score = 80.2 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 38/400 (9%), Positives = 101/400 (25%), Gaps = 27/400 (6%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G R+ ++ + A + +D L+ I S + + + ++++ K
Sbjct: 36 GKRIVKLRNDPTGVTHAIRLDNDIFKLNVYIKNIDTSKSNLRYTEGYLRSLTNILTRAKE 95
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
G +S + ++ + L D+ ++ G + G+ S A V
Sbjct: 96 IAIQGASGTYESDDKKMISKEVNALLEDVVAIANAKGPDGYSIFSGTKIDSEAFKVTREN 155
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
K ++ + T+
Sbjct: 156 KISKTSKDGAGPQIIKVEYNGNQAEKKTEVYNDIH------------------------- 190
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + ++ + + + +
Sbjct: 191 --MSNNYPGNVIFFLQNQNIISSINTNGFAVKENTKIYIDNIEIGLTAGDTALDIVAKIN 248
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+SA + + + + + T L
Sbjct: 249 ESSAPVEASIDPVLNSLSIKTTTPHQIWITEEKESNVLQTLGILTKNNDTKLPPYNLSSS 308
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
S+ I E+L ++ ID +K + +G+ +R+
Sbjct: 309 TEVRSRSIFDALIELRDTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSY 368
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ I +++ + + D D+ T L+ Q+++
Sbjct: 369 ERISKEAADMKEDMIQYTDLDVTKAITNLNMASLAYQVSI 408
>gi|28974943|gb|AAO61408.1| flagellin [Ralstonia sp. OV203]
Length = 241
Score = 80.2 bits (195), Expect = 7e-13, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 68/171 (39%), Gaps = 3/171 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN S++ Q L L+ R+S+GLRV+ A D+ A ++++ + + + +
Sbjct: 1 LSLNTNISSLQTQQALSTSQSALQTSLQRLSTGLRVNSAKDDVAAYAVSSSLTTTLNSQT 60
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
+S + A + +++ + + ++ TD ++ E QL +
Sbjct: 61 QGIQNANNAASYLQTADSYLNQVQNNLQRMRQLAVESNNGGLSTTDQANLDKEYQQLATA 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
+++ +++NG + S+T +S N +
Sbjct: 121 NKNVETNANYNGAKLFDGSVTSTTFQYGQSATTDVTTVTNANLSGFGTLTG 171
Score = 41.3 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 38/104 (36%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ ++T + + L+ + + + + IDT + +A
Sbjct: 138 GSVTSTTFQYGQSATTDVTTVTNANLSGFGTLTGTSVSTTASATAAQASIDTDLGNLKSA 197
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+G+ S ++ + + A+ L+D D ASE++ +
Sbjct: 198 RASLGAQQSGLNSTINTLTSNNTALSAARSSLIDTDYASETSNM 241
>gi|4760503|dbj|BAA77312.1| flagellin [Pseudomonas putida]
Length = 170
Score = 80.2 bits (195), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 45/139 (32%), Gaps = 3/139 (2%)
Query: 44 AAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VE 100
AA IA + S L+ G S A+ M + D++ ++
Sbjct: 1 AAGLQIANRLTSQVKGLTVAVKNANDGISIAQTAEGAMQASTDILQRMRELALQSANGSN 60
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
D S+Q E T L +L IA ++F G N L S++ + + +
Sbjct: 61 SDEDRSSLQQEFTALSGELTRIANTTTFGGRNLLDGTFTSTSFQVGANANETISFGMRSI 120
Query: 161 VQITTIDYYLDPETVLLDS 179
Y + S
Sbjct: 121 SASDLKGNYTEASVSGAAS 139
>gi|170748100|ref|YP_001754360.1| flagellin domain-containing protein [Methylobacterium radiotolerans
JCM 2831]
gi|170654622|gb|ACB23677.1| flagellin domain protein [Methylobacterium radiotolerans JCM 2831]
Length = 389
Score = 80.2 bits (195), Expect = 7e-13, Method: Composition-based stats.
Identities = 71/358 (19%), Positives = 131/358 (36%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+S+ TN++AM+A L+ I NL+ D +S+GL+++ A+DNAAYW+IA ++ DN +L
Sbjct: 1 MSSLFTNNAAMTAQLTLKLIGQNLDKTNDVISTGLKIAGASDNAAYWAIATQIRQDNASL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV D+IG G V+I ++ + ++ +K K+T G D IQ+++ S+ R
Sbjct: 61 GAVKDSIGQGLGVVNITYQALNTMVGELAEVKRKLTTASGVGVDRMLIQNDLNATISRFR 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A +S GE+WL D T + + V+ F R TT + + ++
Sbjct: 121 AYAADASQAGESWLSVDSSQPTYAAIRKVVSGFTRVLGKPTLTTTDIDTAQLKLYDVKTT 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + D ++ Y++SG + G++ A
Sbjct: 181 AGTAGTSAAVAAIQTTYDTAKASYDAALAAYNSSGKDTAAVTAYTAAKGSFDAATATYNT 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + A + DI S +
Sbjct: 241 NKASANAGAKVGNDGTGGILNKDYSVLGADNNGFLKAYKLNFDTMDISTVLPNDLSKVNA 300
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
++ + S + ++ I N + + K
Sbjct: 301 YVAMVERISSALTAVASNLGSLKAQMQSFQNYTDTLSKANDTSIGILVDGNMEEESTK 358
Score = 74.8 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 84/226 (37%)
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
TT+ + AA T+ S + + S+ +
Sbjct: 163 TTTDIDTAQLKLYDVKTTAGTAGTSAAVAAIQTTYDTAKASYDAALAAYNSSGKDTAAVT 222
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
+ ++ T+ ++ D +
Sbjct: 223 AYTAAKGSFDAATATYNTNKASANAGAKVGNDGTGGILNKDYSVLGADNNGFLKAYKLNF 282
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
T +T N+ + V+ ++ TA A +GS+ +++ +++ + A +
Sbjct: 283 DTMDISTVLPNDLSKVNAYVAMVERISSALTAVASNLGSLKAQMQSFQNYTDTLSKANDT 342
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+G LVD +M EST+L ALQ QQQL +Q+L+I N +T +ILSLFR
Sbjct: 343 SIGILVDGNMEEESTKLKALQVQQQLGIQSLTIANQNTQQILSLFR 388
>gi|170722884|ref|YP_001750572.1| flagellar hook-associated protein FlgL [Pseudomonas putida W619]
gi|169760887|gb|ACA74203.1| flagellar hook-associated protein 3 [Pseudomonas putida W619]
Length = 524
Score = 80.2 bits (195), Expect = 7e-13, Method: Composition-based stats.
Identities = 56/523 (10%), Positives = 126/523 (24%), Gaps = 81/523 (15%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T +++ + NL + SS +RV+ AAD+ + + + L+
Sbjct: 3 ISTAQFYQTSAANYQRNYSNLIKTNEEASSFVRVNTAADDPVGAARLLQLGNQADMLAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
++ ++ + ++ +++ + T+ K+ +E+ QL+ QL
Sbjct: 63 KTNATNITNSLNQTETTLNSINTILTRVNELAIESGNAGYTDTERKAKAAELGQLEDQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK-------------------- 160
+ NG+ + + + + D +
Sbjct: 123 SLMNSRDENGQYLFAGSSTDTAPFVRNADGTYSYQGDQTQLELQVGDMLKMAGNSSGYSV 182
Query: 161 -------------------------VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ + + + +
Sbjct: 183 FEQALNTSRTETSLSSPAVDDGRVKLSNGQVSGSVTYNDRFRSGQPYTVTMLSSTEFSIT 242
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ V + T+ +A L +
Sbjct: 243 DSLGNDVTAEATQGGKFDPDTVGGSMISFRGVDMRLNINLQDGDVPDAAVAGHTFTLQSK 302
Query: 256 PAAPNTTSGTSGSKSPS------VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
P T S + N ++ T+ +
Sbjct: 303 PDTITATRSPGNPSSAQVSSISITDPAQYKAMFPNGGAVIKFTSATDFELYAQPLTADSR 362
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF-I 368
V + + S +N+ H + + + +S I
Sbjct: 363 PVASGAMTGNVASAAGVDFTFTSTPAQQSGDQYVVNVDNHQTQNVLDTVAQLRTALSKPI 422
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKL---------------------MRDAVEKGV 407
D + S + I +D + + A
Sbjct: 423 DGDNAAYQQLRADLDSAIANIQSGQDALNTAVTDIGARGKALEIQQNTNESLSIANSTTQ 482
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ D+D A+ RL+ QT Q + A + V+ LSLF
Sbjct: 483 SSIRDSDPATVLVRLTQQQTLLQASQAAFARVSQ-----LSLF 520
>gi|220905262|ref|YP_002480574.1| flagellar hook-associated protein 3 [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869561|gb|ACL49896.1| flagellar hook-associated protein 3 [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 512
Score = 80.2 bits (195), Expect = 7e-13, Method: Composition-based stats.
Identities = 37/485 (7%), Positives = 115/485 (23%), Gaps = 63/485 (12%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+++ ++ S+ +++ +D+ A + + D A ++
Sbjct: 17 QMQKSLSAYMESNEQGSTQKKINRPSDDPAGMYRVLMTRDDISATKQYQSNCDTAKGWLE 76
Query: 76 IAKAGMSKAID---VMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGS----SF 128
+ + + + + + A K I E ++ Q+ +++ S
Sbjct: 77 LTDNVLGTQLSNAIISLKSRMEQAATGTTADQRKLIAQEAREIFGQILNLSNTQFNGKSI 136
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
+ + ++ G I D +
Sbjct: 137 FAGQRYDLNAYEQSLALTCWDDTWNNEISQGHYSIDGASNTSMMIQFTDDGTLGTDTLTY 196
Query: 189 LLDRNHKIKVEPQVLK----------------------DIDVSVYDASGTISTKKFKLAT 226
++ + D S+ + + +
Sbjct: 197 RWSKDGGDTWTTSTVPAGSRTLVADGVTITMDQDMAVSAADTSLGPGAKNGTLVYIRPTA 256
Query: 227 TSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSD 286
G A + A + S + Y ++
Sbjct: 257 VYQGDDNDPPPEMTVMGGPAGLKTSANGAFGNNVLVRMDNTVDLNSTGTAFNYSYSLDNG 316
Query: 287 IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI 346
+ + + + ++ +D+ + + +
Sbjct: 317 GTWVTASGQTTGGGTVRLPVPGGYMDMDATATNPPTSVIDAGTQVLIHPSRANLNLEIMQ 376
Query: 347 TRHAN----------------------------------TDAYNEKLAMEEMVSFIDTQI 372
+ + N + ++ ++ I+
Sbjct: 377 GTYISVNNVGKDIFGGYYQGQPSLEGGQNLFDVVGEFIAYCENNNQEGCQKSLAAIEQAH 436
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A +IG + +R+ + +D + + E+ + D D+ +L+ Q Q
Sbjct: 437 AHILAYEARIGGLENRVSMAQDVLSFQKLDQEERLSYTEDIDLTELLAKLTRQQLTYQTV 496
Query: 433 VQALS 437
+Q+ S
Sbjct: 497 LQSSS 501
>gi|28974941|gb|AAO61407.1| flagellin [Ralstonia pickettii]
Length = 241
Score = 79.8 bits (194), Expect = 8e-13, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 66/172 (38%), Gaps = 3/172 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN S++ Q L L R+S+GLRV+ A D+AA +++A + + + +
Sbjct: 1 LSLNTNISSLQTQQALSQSQSALHTSLQRLSTGLRVNSAQDDAAAYAVASSLTTTLNSQT 60
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
S + A + + + + + ++ TD ++ E +L +
Sbjct: 61 QGIQNSNQAMSYLQTADSYLGQVENNLQRMRQLAVEANNGGLSTTDQANLDKEYQKLATA 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL 170
++I +++NG + S+T ++ N +
Sbjct: 121 NKNIETNANYNGNKLFDGSVTSTTFQYGQNAATDVTSVSNANLSTFGTLSGT 172
Score = 41.3 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 38/109 (34%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + S L+ + + + IDT +
Sbjct: 133 NKLFDGSVTSTTFQYGQNAATDVTSVSNANLSTFGTLSGTSVTSTANATAAQAAIDTDLT 192
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
AA +G+ S ++ + + A+ L+D D ASE++ +
Sbjct: 193 NLKAARANLGAQQSGLNSTINTLTSNNTALSAAKSSLIDTDYASETSNM 241
>gi|148378794|ref|YP_001253335.1| flagellin [Clostridium botulinum A str. ATCC 3502]
gi|153932175|ref|YP_001383182.1| flagellin [Clostridium botulinum A str. ATCC 19397]
gi|153935308|ref|YP_001386730.1| flagellin [Clostridium botulinum A str. Hall]
gi|148288278|emb|CAL82352.1| flagellin [Clostridium botulinum A str. ATCC 3502]
gi|152928219|gb|ABS33719.1| flagellin [Clostridium botulinum A str. ATCC 19397]
gi|152931222|gb|ABS36721.1| flagellin [Clostridium botulinum A str. Hall]
Length = 473
Score = 79.8 bits (194), Expect = 8e-13, Method: Composition-based stats.
Identities = 47/474 (9%), Positives = 130/474 (27%), Gaps = 34/474 (7%)
Query: 11 MSASQKLRDIN--YNLEVVQD-RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M+ + +IN L + ++S+ RV+ AAD+ + + + + + V I
Sbjct: 1 MNKLSLINNINYFNKLATINSMKLSTNKRVNVAADSPSEIGRISRINTSVRSRNIVVKNI 60
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSS 127
G S + + + ++ ++ + +K + ++ + +S L +++
Sbjct: 61 QEGISLLQVKENAVNDLKEMGTRLKELSLMYKNNTLNKDDKKNIEYEAKSLLENMSFTIK 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
N G + D + TI + + +
Sbjct: 121 NTKFNRKNLFNGEKLNIQGSTYNTDIKLMDFKVSKGDTIFIGNNKSSNESHTIKVSDNEI 180
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ + + ++ +++ V + + + +
Sbjct: 181 DTILKKYNLEKADKIVLYELEMVEEHNIKTVFTSKYGYKNNANTDIVNVSNNANKMFSIN 240
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
+ + + ++ I++ T NSI + N
Sbjct: 241 GTINDNSKVKGYLQEKDNKLIGNININDKGYNIQLDAIMEDALKTNLNSIKTTIINKNDH 300
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI--------------------T 347
+ + + S K++ + +
Sbjct: 301 TFRGNTSIIDIRDNSGMTYIFKEITVDEFKEIIANDKSNNKNKQIVFELTNNKKCALDIN 360
Query: 348 RHANTDAYNEKLAMEEMVSFI--------DTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
+++ +S I + + IG ++ + + +F +
Sbjct: 361 SKDVNLYISDEEYNSFDISDILNSPNIIGEKVLSELKNYQNYIGIKTNELEYKLNFEQNN 420
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN--NSTARILSLFR 451
+ E + ++ D+A E S + L + N IL+L R
Sbjct: 421 QILEETTLDKIQSIDIAKELVEKSKNEILVNT-NAVLLQSSLENDKNYILTLLR 473
>gi|313610137|gb|EFR85452.1| flagellin [Listeria monocytogenes FSL F2-208]
Length = 174
Score = 79.8 bits (194), Expect = 8e-13, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 38/96 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +E ID I + +G+ SR+ + A + + DAD
Sbjct: 77 VADADSSQEATEAIDELINNISNGRALLGAGMSRLSYNVSNVNNQSIATKASASSIEDAD 136
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA+E + ++ + Q ++ LS N + + L
Sbjct: 137 MAAEMSEMTKYKILTQTSISMLSQANQTPQMLTQLI 172
>gi|218662515|ref|ZP_03518445.1| flagellin C protein [Rhizobium etli IE4771]
Length = 332
Score = 79.8 bits (194), Expect = 8e-13, Method: Composition-based stats.
Identities = 67/255 (26%), Positives = 110/255 (43%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI S +A LRDIN N+ V Q+ +++G+RV+ AADNA YWSIA ++DN A+SA
Sbjct: 2 SIYQRVSIDAALHVLRDINRNMTVTQNHITTGMRVAKAADNAVYWSIATTARTDNKAISA 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
V DA+G+ ++ + A G+ +DV+S IK K+ A E G D I E+ QLQ QLR +
Sbjct: 62 VQDALGMAAATMGTAYTGVQNVVDVVSEIKAKLVAATEDGVDKAKINEELKQLQEQLRSV 121
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ ++FN +NW+ + ++ + D + + S
Sbjct: 122 SESATFNSDNWVVLNNDATPTQPRQIPASFIRNADGTVSVGMLSYHIDNTPVGATSSKDA 181
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + V ++ +++K A L A
Sbjct: 182 RYLIDDRATGSGEYGVLTSAHFASELGTSQNYVLMTSKNGTTAGQVVISLSATTTQGQIG 241
Query: 243 KGIATIPVPLPAAPA 257
+ I+ + L
Sbjct: 242 EMISVVDAALTQLTT 256
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/312 (17%), Positives = 101/312 (32%), Gaps = 1/312 (0%)
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ ++ ++ I + +R T S
Sbjct: 20 NRNMTVTQNHITTGMRVAKAADNAVYWSIATTARTDNKAISAVQDALGMAAATMGTAYTG 79
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
Q + D+ + + A + + ++
Sbjct: 80 VQNVVDVVSEIKAKLVAATEDGVDKAKINEELKQLQEQLRSVSESATFNSDNWVVLNNDA 139
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
T + + + + +G + T + +S G+ Y V
Sbjct: 140 TPTQ-PRQIPASFIRNADGTVSVGMLSYHIDNTPVGATSSKDARYLIDDRATGSGEYGVL 198
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
T + + T + A + + EM+S +D + T
Sbjct: 199 TSAHFASELGTSQNYVLMTSKNGTTAGQVVISLSATTTQGQIGEMISVVDAALTQLTTVG 258
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
G++ RI LQ DF + D + G+GRLVDADM E+++L ALQTQQQL +Q+L+I
Sbjct: 259 SAFGALEKRIELQNDFAAKLHDNITAGIGRLVDADMEEEASKLKALQTQQQLGLQSLNIA 318
Query: 440 NNSTARILSLFR 451
N + + LF+
Sbjct: 319 NATYDTVRQLFQ 330
>gi|28974947|gb|AAO61410.1| flagellin [Ralstonia sp. Q3-8/14]
Length = 241
Score = 79.8 bits (194), Expect = 8e-13, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 67/162 (41%), Gaps = 3/162 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN S++ Q L + L+ R+S+GLRV+ A D+AA +++A + + + +
Sbjct: 1 LSLNTNISSLQTQQALSESKSALQTSLQRLSTGLRVNSAQDDAAAYAVASSLTTKLNSQT 60
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
S + A + + + + + ++ TD ++ E QL S
Sbjct: 61 QGIQNSNQALSYLQTADSYLGQVENNLQRMRQLAVEANNGGLSTTDQGNLDKEYQQLASA 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
+ I + +++NG + S+T +S N
Sbjct: 121 NKSIEQNANYNGAKLFDGTITSTTFQYGQSASTDVATVTNAN 162
Score = 40.9 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 37/104 (35%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
T ++T + + L ++ + + IDT + +A
Sbjct: 138 GTITSTTFQYGQSASTDVATVTNANLASFGTLSSTSVTTTANATAAQAAIDTDLTNLKSA 197
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+G+ S ++ + + A+ ++D D ASE++ +
Sbjct: 198 RASLGAQQSGLNSTINTLTSSNTALSAAKSAMIDTDYASETSNM 241
>gi|190892543|ref|YP_001979085.1| flagellin C protein [Rhizobium etli CIAT 652]
gi|190697822|gb|ACE91907.1| flagellin C protein [Rhizobium etli CIAT 652]
Length = 332
Score = 79.8 bits (194), Expect = 9e-13, Method: Composition-based stats.
Identities = 67/255 (26%), Positives = 111/255 (43%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI S +A LRDIN N+ V Q+ V++G+RV+ AADNA YWSIA ++DN A+SA
Sbjct: 2 SIYQRVSVDAALHVLRDINRNMTVTQNHVTTGMRVAKAADNAVYWSIATTARTDNKAVSA 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
+ DA+G+ ++ + A G+ IDV+S IK K+ A E G D I EI QLQ QLR +
Sbjct: 62 IQDALGMAAATMGTAYTGVQNVIDVVSEIKAKLVAATEDGVDKSKIDEEIKQLQEQLRSV 121
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ ++FN +NW+ + ++ + D + + S
Sbjct: 122 SESATFNSDNWVILNNDATPTQPRQIPASFIRNADGTISVGMLSYHIDNTPVGATSSKDA 181
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + V ++ +++K L ++ +
Sbjct: 182 RYLIDDRATGSGEYGVLTSAYFATELGTSQDYVLMTSKNGTTTGQVVISLSSSTTKGQVS 241
Query: 243 KGIATIPVPLPAAPA 257
+ I+ + L
Sbjct: 242 EMISVVDAALTQLTT 256
Score = 67.1 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 56/312 (17%), Positives = 100/312 (32%), Gaps = 1/312 (0%)
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ ++ ++ + + +R T S
Sbjct: 20 NRNMTVTQNHVTTGMRVAKAADNAVYWSIATTARTDNKAVSAIQDALGMAAATMGTAYTG 79
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
Q + D+ + + + + ++
Sbjct: 80 VQNVIDVVSEIKAKLVAATEDGVDKSKIDEEIKQLQEQLRSVSESATFNSDNWVILNNDA 139
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
T + + + I +G + T + +S G+ Y V
Sbjct: 140 TPTQ-PRQIPASFIRNADGTISVGMLSYHIDNTPVGATSSKDARYLIDDRATGSGEYGVL 198
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
T + + T + + K + EM+S +D + T
Sbjct: 199 TSAYFATELGTSQDYVLMTSKNGTTTGQVVISLSSSTTKGQVSEMISVVDAALTQLTTVG 258
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
G++ RI LQ DF + D + G+GRLVDADM ES+RL ALQTQQQL +Q+L+I
Sbjct: 259 SAFGALEKRIELQNDFATKLHDNITAGIGRLVDADMEEESSRLRALQTQQQLGLQSLNIA 318
Query: 440 NNSTARILSLFR 451
N + + LF+
Sbjct: 319 NATYDTVRQLFQ 330
>gi|37360926|dbj|BAC98372.1| flagellin [Burkholderia glumae]
Length = 302
Score = 79.8 bits (194), Expect = 9e-13, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 51/138 (36%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T+ + T +T+ + + + ++N ++ N + + + + +
Sbjct: 165 TNLTLATGATSGVTTAQASAAANMISQINSVNAPPTVSSLNINNATSANQAIVSVANALS 224
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ +R+ + + ++ AD A E+ LS Q QQ +
Sbjct: 225 TINNLQATLGATQNRLQGIAQTQQANSTNLSSAQSQIQSADFAQETAALSKAQVLQQAGI 284
Query: 434 QALSIVNNSTARILSLFR 451
L+ N+ ++L L +
Sbjct: 285 SVLAQANSLPQQVLKLLQ 302
>gi|28974945|gb|AAO61409.1| flagellin [Ralstonia sp. OV225]
Length = 241
Score = 79.8 bits (194), Expect = 9e-13, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 68/172 (39%), Gaps = 3/172 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ +N S++ Q L L+ R+S+GLRV+ A D+ A ++++ + + + +
Sbjct: 1 LSLNSNISSLQTQQALSTSQSALQTSLQRLSTGLRVNSAKDDVAAYAVSSSLTTTLNSQT 60
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
+S + A + +++ + + ++ TD ++ E QL +
Sbjct: 61 QGIQNANNAASYLQTADSYLNQVQNNLQRMRQLAVESNNGGLSTTDQANLDKEYQQLATA 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL 170
+++ +++NG + S+T +S N +
Sbjct: 121 NKNVETNANYNGAKLFDGSVTSTTFQYGQSATTDVTTVTNANLSGFGTLTGT 172
Score = 42.4 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 37/104 (35%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ ++T + + L+ + + + IDT + +A
Sbjct: 138 GSVTSTTFQYGQSATTDVTTVTNANLSGFGTLTGTGVSTTASATAAQASIDTDLGNLKSA 197
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+G+ S ++ + + A+ L+D D ASE++ +
Sbjct: 198 RASLGAQQSGLNSTINTLTSNNTALSAARSSLIDTDYASETSNM 241
>gi|167464315|ref|ZP_02329404.1| flagellar hook-associated protein FlgL [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 299
Score = 79.8 bits (194), Expect = 9e-13, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 46/116 (39%), Gaps = 4/116 (3%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ L L + ++++G +++ +D+ + + +S+ A + S
Sbjct: 16 RNLNSTLNKLADITMQINTGRKLNKPSDDPIGVTYSVYYRSELTANQQYKKNVEDALSWF 75
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI----QSEITQLQSQLRDIARGS 126
D + ++ D+M +K T G S + E+ +L+ +L +IA
Sbjct: 76 DFNDKTIGQSTDIMHRLKELATNAASSGGKSPETLNGIKKEVNELKDELLNIANSR 131
Score = 40.9 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 18/265 (6%), Positives = 52/265 (19%), Gaps = 1/265 (0%)
Query: 152 SFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+R G + L D + L + +
Sbjct: 1 MSMRITQGMMHSQINRNLNSTLNKLADITMQINTGRKLNKPSDDPIGVTYSVYYRSELTA 60
Query: 212 DASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
+ + + + +
Sbjct: 61 NQQYKKNVEDALSWFDFNDKTIGQSTDIMHRLKELATNAASSGGKSPETLNGIKKEVNEL 120
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
N + + S G Y + +
Sbjct: 121 KDELLNIANSRYNGRYVFNGQKVDQMPYTEKTAASAFTDAGKIIYDIGAGVQIDINYSGG 180
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV-SFIDTQIKCATAAAGKIGSISSRIH 390
+ + + NE + ++++ + ++G+ +R+
Sbjct: 181 EIFGNPEDEDQIFKVLEEFSQALENEDYDQVNALRGKLESRFDKMQSVRSEVGAKVNRVE 240
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADM 415
L + +K + + + DAD+
Sbjct: 241 LTRERLKDLETNLTSLQAKTEDADI 265
>gi|218673869|ref|ZP_03523538.1| flagellin C protein [Rhizobium etli GR56]
Length = 315
Score = 79.8 bits (194), Expect = 9e-13, Method: Composition-based stats.
Identities = 68/294 (23%), Positives = 113/294 (38%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI S +A LRDIN N+ V Q+ +++G+RV+ AADNA YWSIA ++DN A+SA
Sbjct: 2 SIYQRVSIDAALHMLRDINRNMTVTQNHITTGMRVAKAADNAVYWSIATTARTDNKAISA 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
V DA+G+ ++ + A G+ +DV+S IK K+ A E G D I E+ QLQ QLR +
Sbjct: 62 VQDALGMAAATMGTAYTGVQNVVDVVSEIKAKLVAATEDGVDKTKINEELKQLQEQLRSV 121
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ ++FN +NW+ + ++ + D + + S
Sbjct: 122 SESATFNSDNWVVLNNDATPTQPRQIPASFIRNADGTISVGMLSYHIDNTPVGATSSKDA 181
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ V ++ +++K L AA
Sbjct: 182 RYLIDDRATGAGEYGVLTSAHFASELGTSQNYVLMTSKNGTTTGQVVISLSAATTQGQIG 241
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
+ I+ + L + R + +
Sbjct: 242 EMISVVDAALTQLTTVGSAFGALEKRIELQSDFRRQTARQHHRRASAGWSMPTW 295
>gi|269961606|ref|ZP_06175968.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833647|gb|EEZ87744.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 396
Score = 79.8 bits (194), Expect = 9e-13, Method: Composition-based stats.
Identities = 47/434 (10%), Positives = 109/434 (25%), Gaps = 53/434 (12%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T I + H+ S LR + Q++++SG +++ +D+ Q + L
Sbjct: 3 TRISSFHNYQSVQNDLRRQENKVHHNQEQLASGKQLTKPSDDPLATHYIQSIGQQEEQLK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
DAI L ++++ + ++ A K + + ++ + +L +
Sbjct: 63 QYLDAIVLVRNRLENQEVVIANAEQFTDESKRISMEMINGAFSPEDRAAK----KRELEE 118
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA F + + G+ + K F RD +G
Sbjct: 119 IANN--FLALVNTQDESGNYVFAGTKPKSQPFFRDYDGS--------------------- 155
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ +L +
Sbjct: 156 -----------------------VVYTGDDYQRKMKIASNIELGINYPGNHLFSEIPNPF 192
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + TS + + + V + + P
Sbjct: 193 GDFEPQYDLQEGSELLLGQATSASEDNSNYKVTFVDMSNGKFGYQLEKDGSIVQVDDYSP 252
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
V + + D+ + + + ++ + +
Sbjct: 253 IDGIQYEGINIQLKGQVSAGDSITLEPRQTFSVFDAFKETMQWSESSVSD---ASATAKL 309
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+M +G+ S + +QE + ++ K D D +
Sbjct: 310 HQMTEEFQAAFVHMNKVRTDLGAKLSTLDIQEQNHEDFNLSLAKAKSNFEDLDYSKAVIE 369
Query: 422 LSALQTQQQLAVQA 435
S Q + QA
Sbjct: 370 FSENSRALQASQQA 383
>gi|254230133|ref|ZP_04923528.1| flagellar hook-associated protein 3 [Vibrio sp. Ex25]
gi|262394932|ref|YP_003286786.1| flagellar hook-associated protein FlgL [Vibrio sp. Ex25]
gi|151937326|gb|EDN56189.1| flagellar hook-associated protein 3 [Vibrio sp. Ex25]
gi|262338526|gb|ACY52321.1| flagellar hook-associated protein FlgL [Vibrio sp. Ex25]
Length = 397
Score = 79.8 bits (194), Expect = 9e-13, Method: Composition-based stats.
Identities = 48/434 (11%), Positives = 111/434 (25%), Gaps = 52/434 (11%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T I + H+ S LR + Q++++SG ++ +D+ Q + L
Sbjct: 3 TRISSFHNYQSVQNDLRRQENKVHHNQEQLASGKKLLKPSDDPLASHYIQNISQQQEQLQ 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
+I L ++++ + ++ A + K + ++ Q++ + +L +
Sbjct: 63 QYLSSIVLVRNRLENHEVNIANAENFADESKRLTMEMINGAFSAEDRQAK----KRELEE 118
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA F + + G+ + K F R
Sbjct: 119 IANN--FLNLVNSQDESGNYVFAGTKPKSQPFYR-------------------------- 150
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
D++ ++ + ++ KL +D
Sbjct: 151 ---------DKDGSVQYAGDDYQRKMKVSSMLEMPMNDPGSKLFMEIPNPFGDYQPNYDL 201
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
G + + + + R G + + I
Sbjct: 202 QNGSELLLNRATNVDTKDDAAYRVTFVDMNNGKFGYQLERNGKVVDADEFSPEKGIEYKG 261
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ ++ + S S+ + +
Sbjct: 262 LKVHVKGQITPGDSIEIEKRAEFSIFDTFKDAMAWSDKSVS-----------DTSATAKL 310
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+M A G+ S + +QE + ++ K D D +
Sbjct: 311 HQMTEEFHAAFIHLNKARTDAGARLSTLDIQEQNHEDFNLSLAKAKSNFEDLDYSKAVIE 370
Query: 422 LSALQTQQQLAVQA 435
S Q + QA
Sbjct: 371 FSENSRALQASQQA 384
>gi|218661981|ref|ZP_03517911.1| flagellin C protein [Rhizobium etli IE4771]
Length = 310
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 56/128 (43%), Positives = 81/128 (63%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M+A LR IN Q +VSSG R+ AAD+A+YWS+A +M+SD+ L + DA+GLG
Sbjct: 1 MNALAVLRSINKEASQTQQQVSSGYRIETAADDASYWSVATVMRSDSTNLGTIGDALGLG 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
++KVD M+ AID+++ I+ K+ A E GTD I +EI++ + QLR + +SF G
Sbjct: 61 AAKVDATYTAMTSAIDLVTQIRAKLVAAREPGTDKDKINAEISEYKEQLRTVVESTSFAG 120
Query: 131 ENWLRTDL 138
ENWL
Sbjct: 121 ENWLLNSD 128
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 56/104 (53%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ +M+ D+ + T + IG + +RI Q D+ + D+++K
Sbjct: 206 GTEVAIGKNTTDAQLADMLDVTDSLLSSLTTTSASIGVMKARIDDQIDYTADLSDSIDKS 265
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
VG LVD DM S R A++TQ+Q+AV+A+SI+N + ++IL L
Sbjct: 266 VGALVDTDMDEASIRQKAIETQKQMAVEAISILNTAASKILILL 309
>gi|319944128|ref|ZP_08018406.1| flagellar hook-associated protein 3 [Lautropia mirabilis ATCC
51599]
gi|319742622|gb|EFV95031.1| flagellar hook-associated protein 3 [Lautropia mirabilis ATCC
51599]
Length = 299
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/184 (11%), Positives = 64/184 (34%), Gaps = 3/184 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M + +N A Q + + + +Q + S+G +V+ +D+ + + ++SD
Sbjct: 1 MMRVASNQFRNQAVQTITEQQATIAKLQQQASTGQKVNRPSDDPLAAAEVERLRSDQART 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQS--- 117
+ + S++ A++ + I+ + ++ + + + + ++ QL
Sbjct: 61 NIEKRMMSFAKSQMAQAESLLGNGIETLQRARDLMISARNGVMNREDRETIAGQLMQYRI 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L DIA + +G ++ + + + ++
Sbjct: 121 ELLDIANQQTQDGNYIFGGSGSEHAPFWPQNNPTFQSEPGVRQTGLRIPYDLTVDGSWVM 180
Query: 178 DSST 181
Sbjct: 181 QGFG 184
Score = 37.8 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 17/146 (11%), Positives = 38/146 (26%)
Query: 293 TKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANT 352
+ S + D L+ A
Sbjct: 144 HAPFWPQNNPTFQSEPGVRQTGLRIPYDLTVDGSWVMQGFGARDEESIFQELDTVIGALR 203
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
+ A++ +S +D + + +G I +E + + + L+D
Sbjct: 204 GNGDVDGALKRGMSSVDQTLNLMSEQRSILGEQMHMIDARERLLSSGELSASQRRSDLMD 263
Query: 413 ADMASESTRLSALQTQQQLAVQALSI 438
D A + + + + A+Q S
Sbjct: 264 TDYAEVLSGIQSRDMALRAAMQTYSQ 289
>gi|224532856|ref|ZP_03673471.1| flagellar hook-associated protein 3 [Borrelia burgdorferi WI91-23]
gi|224512245|gb|EEF82631.1| flagellar hook-associated protein 3 [Borrelia burgdorferi WI91-23]
Length = 424
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/400 (9%), Positives = 100/400 (25%), Gaps = 27/400 (6%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G R+ ++ + + +D L+ I S + + + ++++ K
Sbjct: 36 GKRIVKLRNDPTGVTHTIRLDNDIFKLNVYIKNINTSKSNLRYTEGYLQSLTNILTRAKE 95
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
G +S + ++ + L D+ ++ G + G+ S A V
Sbjct: 96 IAIQGASGTYESDDKKMISKEVNALLEDVVAIANAKGPDGYSIFSGTKIDSEAFKVTREN 155
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
K ++ + T+
Sbjct: 156 KISKTSKDGAGPQIIKVEYNGNQAEKKTEVYNDIH------------------------- 190
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + ++ + + + +
Sbjct: 191 --MSNNYPGNVIFFLQNQNIISSINTNGFAVKENTKIYIDNIEIGLTAGDTALDIVAKIN 248
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+SA + + + + + T L
Sbjct: 249 ESSAPVEASIDPVLNSLSIKTTTPHQIWITEEKESNVLQTLGILTKNNDTKLPPYNLSSS 308
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
S+ I E+L ++ ID +K + +G+ +R+
Sbjct: 309 TEVRSRSIFDALIELRDTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSY 368
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ I +++ + + D D+ T L+ Q+++
Sbjct: 369 ERISKEAADMKEDMIQYTDLDVTKAITNLNMASLAYQVSI 408
>gi|269968918|ref|ZP_06182882.1| Polar flagellin B/D [Vibrio alginolyticus 40B]
gi|269826471|gb|EEZ80841.1| Polar flagellin B/D [Vibrio alginolyticus 40B]
Length = 220
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/177 (12%), Positives = 49/177 (27%), Gaps = 3/177 (1%)
Query: 53 MKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQ 109
M + L G S A+ M++ +++ +++ + +IQ
Sbjct: 1 MNVQSRGLDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKAERVAIQ 60
Query: 110 SEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
E+T L +L IA +SF G L G+ + I + + + +
Sbjct: 61 EEVTALNDELNRIAETTSFGGNKLLNGTHGAKSFQIGADNGEAVMLELKDMRSDNKMMGG 120
Query: 170 LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + + + Q + + T
Sbjct: 121 VSYQAESGKGKDWNVAEGKNDLKINLTDSYGQEQEINISAKAGDDIEELATYINGQT 177
>gi|256370932|ref|YP_003108756.1| flagellin domain protein [Acidimicrobium ferrooxidans DSM 10331]
gi|256007516|gb|ACU53083.1| flagellin domain protein [Acidimicrobium ferrooxidans DSM 10331]
Length = 277
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 88/258 (34%), Gaps = 4/258 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN SA+ A L + ++ +++SSGL++ AADNAA + I+Q +++ L
Sbjct: 3 LSVNTNLSAIQAYNNLNATSNQMQTTINQLSSGLQIQTAADNAAGYVISQGLQTQANGLG 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG----VERGTDSKSIQSEITQLQS 117
+ S + IA M++ I ++ T+ T + Q E LQS
Sbjct: 63 VAINNGQDAISVLQIASGAMNQQISILQTMNQLATQAANGGANNSNSLSADQQEFAALQS 122
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
QL IA +SF G N L + I TT +
Sbjct: 123 QLDQIANSTSFGGTNLLNGSYSNEVFQIGAYASSVDQVSVTIATLNTTSLGIASSTVSIG 182
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
S + + + V+ V + + + + + + A
Sbjct: 183 TVSAAISAMAAVQSAILAVASAEAVVGAAQNQVQAIIANDTVAQQNVQSANSTLVDTNMA 242
Query: 238 TFDQAKGIATIPVPLPAA 255
A + + A
Sbjct: 243 QAMTAFSSQQVLMQAGVA 260
Score = 60.5 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 35/96 (36%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
A ++ + + I +A +G+ +++ + + V+ LVD +
Sbjct: 181 IGTVSAAISAMAAVQSAILAVASAEAVVGAAQNQVQAIIANDTVAQQNVQSANSTLVDTN 240
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA T S+ Q Q V LS IL L
Sbjct: 241 MAQAMTAFSSQQVLMQAGVAMLSQAQALPQLILKLL 276
>gi|163849801|ref|YP_001637844.1| flagellin domain-containing protein [Methylobacterium extorquens
PA1]
gi|163661406|gb|ABY28773.1| flagellin domain protein [Methylobacterium extorquens PA1]
Length = 364
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/259 (20%), Positives = 91/259 (35%)
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
K++V+ ++ D D + + + + N + ++ V
Sbjct: 105 TTKLQVDLRIALDAIRLTADNAIMNGANWLSVNSEEPNFSVTRNLVTAFSCQGGSVAVGT 164
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A + + A S T + S+ S GY T
Sbjct: 165 SAFDTSGIILFDARAREDGRGAFSRTPAVGCIPTLARGIARTASVASPDGYRLQTWDGPS 224
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ D +I T Y + ++ +D +
Sbjct: 225 QRGGQTLYLTWNHGLLDTQFYVRDGNAEQQPFSIASMDLTSPYADAKMIQAYAKVVDATL 284
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A K+G+ S+ + LQ++F + D +G LVDAD+ S RL AL+ QQQL
Sbjct: 285 QVLLDGAAKLGATSALLSLQQNFAGRLMDINASAIGALVDADIEEASARLKALRVQQQLG 344
Query: 433 VQALSIVNNSTARILSLFR 451
+Q+L+I N ++ IL LFR
Sbjct: 345 LQSLNIANGASQAILVLFR 363
Score = 75.5 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 74/146 (50%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT + TN +A+ A Q LR + + + R+S+GLR+ AAD AAYW+IA +++DNG+L
Sbjct: 1 MTCVFTNPAAVVALQTLRAVVRDRDATLRRLSTGLRIGSAADEAAYWAIASTLRADNGSL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ DAI + V+ + + ID + I + + D+ +Q ++ +R
Sbjct: 61 ATTRDAISHDRNTVEAMARRLDRVIDQLGAIGRTLVSASGAQADTTKLQVDLRIALDAIR 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIA 146
A + NG NWL + S+
Sbjct: 121 LTADNAIMNGANWLSVNSEEPNFSVT 146
>gi|195941913|ref|ZP_03087295.1| flagellar hook-associated protein FlgL [Borrelia burgdorferi 80a]
Length = 424
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/400 (9%), Positives = 100/400 (25%), Gaps = 27/400 (6%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G R+ ++ + + +D L+ I S + + + ++++ K
Sbjct: 36 GKRIVKLRNDPTGVTHTIRLDNDIFKLNVYIKNINTSKSNLRYTEGYLQSLTNILTRAKE 95
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
G +S + ++ + L D+ ++ G + G+ S A V
Sbjct: 96 IAIQGASGTYESDDKKMISKEVNALLEDVVAIANAKGPDGYSIFSGTKIDSEAFKVTREN 155
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
K ++ + T+
Sbjct: 156 KISKTSKDGAGPQIIKVEYNGNQAEKKTEVYNDIY------------------------- 190
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + ++ + + + +
Sbjct: 191 --MSNNYPGNVIFFLQNQNIISSINTNGFAVKENTKIYIDNIEIGLTAGDTALDIVAKIN 248
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+SA + + + + + T L
Sbjct: 249 ESSAPVEASIDPVLNSLSIKTTTPHQIWITEEKESNVLQTLGILTKNNDTKLPPYNLSSS 308
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
S+ I E+L ++ ID +K + +G+ +R+
Sbjct: 309 TEVRSRSIFDALIELRDTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSY 368
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ I +++ + + D D+ T L+ Q+++
Sbjct: 369 ERISKEAADMKEDMIQYTDLDVTKAITNLNMASLAYQVSI 408
>gi|241205518|ref|YP_002976614.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240859408|gb|ACS57075.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 332
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 65/287 (22%), Positives = 114/287 (39%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI S +A LRDIN N+ V Q+ +++G+RV+ A+DNA YWS+A ++DN A+SA
Sbjct: 2 SIYQRVSVDAALHVLRDINRNMAVTQNHITTGMRVAKASDNAVYWSVATTARTDNKAVSA 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
+ DA+G+ ++ + A G+ IDV+S IK K+ A E G D + EI QLQ QLR +
Sbjct: 62 IQDALGMAAATMGTAYTGVQNVIDVVSEIKAKLVAATEDGVDKDKVNEEIKQLQEQLRSV 121
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ ++FN +NW+ + ++ + D + + S
Sbjct: 122 SEAATFNSDNWVVLNNDATPTQPRQIPASFIRNADGTISVGMLSYHIDTTPSGSTTSKDA 181
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + V ++ + +K L A+
Sbjct: 182 RYLIDDRATGSGEYGVLTSAYFATELGASQDYVLMQSKNGTTTGQVVISLSASTTKGQVG 241
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
+ I+ + L + + + + I
Sbjct: 242 EMISVVDAALSQLTTVGSAFGALEKRINLQNDFATKLHDNNATGIGR 288
Score = 63.6 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 60/312 (19%), Positives = 100/312 (32%), Gaps = 1/312 (0%)
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ ++ ++ I + +R T S
Sbjct: 20 NRNMAVTQNHITTGMRVAKASDNAVYWSVATTARTDNKAVSAIQDALGMAAATMGTAYTG 79
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
Q + D+ + + + + ++
Sbjct: 80 VQNVIDVVSEIKAKLVAATEDGVDKDKVNEEIKQLQEQLRSVSEAATFNSDNWVVLNNDA 139
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
T + + + I +G + T S TS G+ Y V
Sbjct: 140 TPTQ-PRQIPASFIRNADGTISVGMLSYHIDTTPSGSTTSKDARYLIDDRATGSGEYGVL 198
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
T + + T + A K + EM+S +D + T
Sbjct: 199 TSAYFATELGASQDYVLMQSKNGTTTGQVVISLSASTTKGQVGEMISVVDAALSQLTTVG 258
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
G++ RI+LQ DF + D G+GRLVDADM ES+RL ALQTQQQL +Q+L+I
Sbjct: 259 SAFGALEKRINLQNDFATKLHDNNATGIGRLVDADMEEESSRLRALQTQQQLGLQSLNIA 318
Query: 440 NNSTARILSLFR 451
N + + LF+
Sbjct: 319 NATYDTVRQLFQ 330
>gi|94267277|ref|ZP_01290830.1| Flagellin-like [delta proteobacterium MLMS-1]
gi|93452069|gb|EAT02757.1| Flagellin-like [delta proteobacterium MLMS-1]
Length = 250
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I ++ ++M ++R + +VSSG R++ AAD+AA IA +++S L
Sbjct: 5 INSDLASMFTLDRMRQSQQDWAASLQQVSSGRRLNQAADDAASLQIANLLESQARGLGQQ 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ G + IA + + DV+ ++ K + + +++Q E+ +L
Sbjct: 65 ARNAADGVAMTQIADGALRQGGDVLQEVRQKALQAANASQSASSRQALQGEVDRLLGSYN 124
Query: 121 DIARGSSFNGENWLRTD 137
+I ++FNG+ L
Sbjct: 125 EILATTTFNGQQLLPDT 141
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 44/128 (34%), Gaps = 1/128 (0%)
Query: 326 DSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
S ++ + + +D ++ G +GS
Sbjct: 121 GSYNEILATTTFNGQQLLPDTLAVGGEVDLGNPEGATAAAGLMDEALEGLNRVRGDLGSR 180
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV-NNSTA 444
++++ + + ++ DAD+A E+ LS +Q +Q + AL+ N + A
Sbjct: 181 QNQLNSELASLANATVNTHAAQSQVADADLAQEAMVLSQMQVLRQAQLFALTQGRNLNQA 240
Query: 445 RILSLFRG 452
L +G
Sbjct: 241 NAQELLQG 248
>gi|21702545|gb|AAM75948.1| putative flagellin [Clostridium botulinum]
Length = 452
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/452 (9%), Positives = 122/452 (26%), Gaps = 31/452 (6%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
++S+ RV+ AAD+ + + + + + V I G S + + + ++ ++ +
Sbjct: 2 KLSTNKRVNVAADSPSEIGRISRINTSVRSRNIVVKNIQEGISLLQVKENAVNDLKEMGT 61
Query: 90 TIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSV 149
+K + ++ + +S L +++ N G +
Sbjct: 62 RLKELSLMYKNNTLNKDDKKNIEYEAKSLLENMSFTIKNTKFNRKNLFNGEKLNIQGSTY 121
Query: 150 IGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
D + TI + + + + + + ++ +++
Sbjct: 122 NTDIKLMDFKVSKGDTIFIGNNKSSNESHTIKVSDNEIDTILKKYNLEKADKIVLYELEM 181
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
V + + + + + +
Sbjct: 182 VEEHNIKTVFTSKYGYKNNANTDIVNVSNNANKMFSINGTINDNSKVKGYLQEKDNKLIG 241
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ ++ I++ T NSI + N + + + S K
Sbjct: 242 NININDKGYNIQLDAIMEDALKTNLNSIKTTIINKNDHTFRGNTSIIDIRDNSGMTYIFK 301
Query: 330 DLPKEIDSGYSMVTLNI--------------------TRHANTDAYNEKLAMEEMVSFI- 368
++ + + +++ +S I
Sbjct: 302 EITVDEFKEIIANDKSNNKNKQIVFELTNNKKCALDINSKDVNLYISDEEYNSFDISDIL 361
Query: 369 -------DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ + IG ++ + + +F + + E + ++ D+A E
Sbjct: 362 NSPNIIGEKVLSELKNYQNYIGIKTNELEYKLNFEQNNQILEETTLDKIQSIDIAKELVE 421
Query: 422 LSALQTQQQLAVQALSIVN--NSTARILSLFR 451
S + L + N IL+L R
Sbjct: 422 KSKNEILVNT-NAVLLQSSLENDKNYILTLLR 452
>gi|329890216|ref|ZP_08268559.1| flagellin fljK [Brevundimonas diminuta ATCC 11568]
gi|328845517|gb|EGF95081.1| flagellin fljK [Brevundimonas diminuta ATCC 11568]
Length = 268
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN A+ A Q L N +L V Q+RV++GL+VS A DN A ++IA +++ GAL +
Sbjct: 4 SINTNAGALIALQNLNATNRDLNVAQNRVNTGLKVSTAKDNGAIFAIATAQRAEMGALDS 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG-TDSKSIQSEITQLQSQLRD 121
V +I G S VD+A A + K+ A + ++ L ++
Sbjct: 64 VKQSIQRGQSIVDVALAAGETITKALEEQKSLAVAIASSTGAAQTAYLADYNALGGEITK 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
G++F+G N S +
Sbjct: 124 ALAGATFDGVNLFSNTTQQSVLTSTS 149
Score = 77.5 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 49/139 (35%), Positives = 75/139 (53%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ + +T + + + + A A + A + ++ +DT I
Sbjct: 130 FDGVNLFSNTTQQSVLTSTSGATQNIGTGAAITVATTATLTAPADATAAQAAITAVDTAI 189
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
TA GK+G+ S + Q F+ M+D++E G+G LVDAD+A ES RL+ALQT+QQL
Sbjct: 190 SGFTAELGKLGTQSKSMERQLTFVSKMQDSLEVGIGNLVDADLAKESARLTALQTKQQLG 249
Query: 433 VQALSIVNNSTARILSLFR 451
VQALSI N S++ +L LFR
Sbjct: 250 VQALSIANQSSSILLGLFR 268
>gi|220913742|ref|YP_002489051.1| flagellar hook-associated protein 3 [Arthrobacter chlorophenolicus
A6]
gi|219860620|gb|ACL40962.1| flagellar hook-associated protein 3 [Arthrobacter chlorophenolicus
A6]
Length = 294
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Query: 1 MTSILTN-HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M + +TN A +A + L+ L +Q++ ++ ++ +D+ A + A + A
Sbjct: 1 MLNRVTNQTMAAAAQRNLQAGQAKLASLQEKGATLQNITRPSDDPAALAAALATRGQLQA 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQL 119
S+ I G+ ++ A + + +A +V++ I++ + + + + +++
Sbjct: 61 ADQYSNNISDGTGWLNTADSALGQATNVLNRIRDLMLQASNGSLNQPAKDAIAAEIEGLN 120
Query: 120 RDI--ARGSSFNGENWLRTDLGSSTASIAKSV 149
+D+ + + + G N + ++ A +
Sbjct: 121 KDLLASANTKYLGRNVFAGNSDAAAAFTGQPP 152
Score = 46.3 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 31/73 (42%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ +D ++K + ++G+ S + D + + +E + DAD+ L
Sbjct: 210 LDAVDDRLKTVISGRAEVGTRQSLLEQARDAVAAQKVTLESRRSAIEDADIGQVVLDLKL 269
Query: 425 LQTQQQLAVQALS 437
+T Q+A+ +
Sbjct: 270 QETNYQVALAVTA 282
>gi|187478192|ref|YP_786216.1| flagellar hook-associated protein 3 [Bordetella avium 197N]
gi|115422778|emb|CAJ49306.1| flagellar hook-associated protein 3 [Bordetella avium 197N]
Length = 410
Score = 79.4 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/437 (9%), Positives = 110/437 (25%), Gaps = 44/437 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T+ + + + L +Q++++SG RV +D+ S+A +
Sbjct: 3 LSTSMIYQNGLNGILNQEAALSRLQEQLASGKRVLTPSDDPLAASLAVNVAQTASMNKNY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL---QSQLR 120
S + + +S A+ + + ++ Q+ L + QL
Sbjct: 63 SANRATLKQSLGAEENALSSAVTTLQDVMKRVVEAGNGTMSDADRQTLSNVLKGARDQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + NG+ G++ + + D G+ + + +
Sbjct: 123 SLANSTDGNGQYLFSGYQGNTQPFVIDASGNVSYNGDKGQRMVQADQSRQLAGSDIGTDI 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
L +
Sbjct: 183 FGRAVPGTLSYIASAGAANKGTGQ------------------------------------ 206
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + + Y +S + T + ++
Sbjct: 207 -----FSTVSLKSPGAGNFVGADFSISFANNATTGKLEYTVTSSSPAFTPITAEYQEGAN 261
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+++ G + S+ + N ++ +
Sbjct: 262 IDMGGVSLSIKGKPQAGDAFQVEMPSSKNMDMFGTLNDLIQTLENPISGSDVQSVELVNK 321
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + + +GS + + + L + K + L + D+ S +T
Sbjct: 322 LATANKSLSLGLDNILTVRASVGSRLNELDALDATGTLNALSYTKQLSDLEETDVYSTTT 381
Query: 421 RLSALQTQQQLAVQALS 437
L Q Q A + S
Sbjct: 382 ELLLRQVALQAASGSFS 398
>gi|182418320|ref|ZP_02949615.1| flagellar hook-associated protein 3 [Clostridium butyricum 5521]
gi|237666729|ref|ZP_04526714.1| flagellar hook-associated protein 3 [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182377702|gb|EDT75246.1| flagellar hook-associated protein 3 [Clostridium butyricum 5521]
gi|237657928|gb|EEP55483.1| flagellar hook-associated protein 3 [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 347
Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/347 (10%), Positives = 103/347 (29%), Gaps = 7/347 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + ++ N+ +Q+++++G + A++N + ++ A
Sbjct: 3 ITNSMLVSNYMNNMQRNLGNMSTLQNQLATGKTIQRASENPYIAVRTMQLNAEISANKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ I S+ +D + +A ++M+ IK ++EI ++ + I
Sbjct: 63 NSNITDASNWLDTTDTALGQANNIMARIKELSVKAGNGSYS----ENEIGAIKDE---IV 115
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
G+ + G+ +KS DDNG + + + D +
Sbjct: 116 EKVKEFGQVLNTSFDGNFIFGGSKSTSKPVGVDDNGNISFIDKNGNPIDMDKIKDVNDPN 175
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
Y + + K ++ V + + + + +K + + +
Sbjct: 176 KIVYDQISSSLKTEISQGVTVEYNKTAVEILNYKDSKGNDTSVINTMSDLVKCLGVASGE 235
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
TI + + + S + +A + V A ++
Sbjct: 236 TKGTITLSDGTTTINGSDDALKYISGKMTEDITAIASNVSQIRSNVGAMQNRMESAKTTN 295
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
+ + D + + + + + I
Sbjct: 296 EDQSYNMTSILSNTDDIDFAEKTMEYSILQTVYIATLQTSSKILNKT 342
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 30/89 (33%)
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
++ + T N K +M I + +G++ +R+ + +
Sbjct: 238 GTITLSDGTTTINGSDDALKYISGKMTEDITAIASNVSQIRSNVGAMQNRMESAKTTNED 297
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQT 427
+ + D D A ++ S LQT
Sbjct: 298 QSYNMTSILSNTDDIDFAEKTMEYSILQT 326
>gi|332704816|ref|ZP_08424904.1| flagellar hook-associated protein 3 [Desulfovibrio africanus str.
Walvis Bay]
gi|332554965|gb|EGJ52009.1| flagellar hook-associated protein 3 [Desulfovibrio africanus str.
Walvis Bay]
Length = 530
Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/326 (9%), Positives = 71/326 (21%), Gaps = 3/326 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M + + + + + +S R++ +D+ A + ++
Sbjct: 1 MIRVSQQMLFTNYVSNMNSSLSQYMNLNMQAASQKRINKGSDDPAGIYQVYNHRETLSSI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
IG + A + + +++ +K G + + I E+ ++ +
Sbjct: 61 DQYRSNIGTAQGWLKQADDTILQMNTIVTRLKELAEQGSTGHLTDANREQISYEVREMYN 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
QL +A + S A + G+ D + D +L
Sbjct: 121 QLITLANQRFEGKSIFAGHKTEESAFEAAMWMRGNDNTDLSNVDFKVEGDAPKTVVIQML 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
S + N
Sbjct: 181 GSPAPSVSGDPVTLANGTRFRYSADGGKTFTDSTVTMSGSDFLLDMGGVRVTVADPTLAV 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ + + + G I A+ +
Sbjct: 241 PPQPPHTFTAVAENDTNDTSGSWMWVYPTARYMGDDKDAIEVDEFGAGGITGSASGVFNK 300
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTEST 323
+ + Y D ST
Sbjct: 301 NTLVRVDDYNGLDTITYSYSTDGGST 326
>gi|310816821|ref|YP_003964785.1| flagellin protein [Ketogulonicigenium vulgare Y25]
gi|308755556|gb|ADO43485.1| flagellin protein [Ketogulonicigenium vulgare Y25]
Length = 217
Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/101 (41%), Positives = 60/101 (59%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
NT ++ ID+ ++ A A+ G++ SRI Q DF+ + D+++ G+G +
Sbjct: 117 NTIDVTSDAGALAALNNIDSIVQTAIDASSAFGAVESRISTQADFVGKLNDSLKSGIGAM 176
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
VDADM S RL ALQ QQQL +QALSI N S +LSLF+
Sbjct: 177 VDADMEEASARLQALQVQQQLGIQALSIANQSPQSLLSLFQ 217
>gi|296447984|ref|ZP_06889890.1| flagellin domain protein [Methylosinus trichosporium OB3b]
gi|296254494|gb|EFH01615.1| flagellin domain protein [Methylosinus trichosporium OB3b]
Length = 303
Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 57/142 (40%), Positives = 85/142 (59%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTN SA++A Q LR +L Q +S+GL++S AADNA+ W IAQ MKSD G L
Sbjct: 1 MSSILTNSSAITALQSLRSTQSSLATTQKEISTGLKISSAADNASTWGIAQTMKSDQGVL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S +SD++ + SS ++IA ++ I V++ IK+++ + G D I + + L SQL
Sbjct: 61 STISDSLNVSSSVLNIASTAITNTISVINNIKSQVAQAAQPGADLSKIGTTLEGLSSQLS 120
Query: 121 DIARGSSFNGENWLRTDLGSST 142
I ++FNG N L +
Sbjct: 121 SIVASANFNGLNLLDGSSATFN 142
Score = 62.1 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 62/115 (53%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ ++ + ++ + +S D I T + +IG++ + + Q F+
Sbjct: 189 QATGASAATDFTALDANSVSSSTSIADTLSNADKAIADLTQYSAQIGAVQTSVSGQATFM 248
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
K + +A+ GV LVDADM STRL ALQTQQQL VQ+LSI N ++ IL LF+
Sbjct: 249 KTLNEALTNGVSSLVDADMNEASTRLQALQTQQQLGVQSLSIANQNSQMILKLFQ 303
>gi|192360249|ref|YP_001982393.1| flagellar hook-associated protein type 3 FlgL [Cellvibrio japonicus
Ueda107]
gi|190686414|gb|ACE84092.1| flagellar hook-associated protein type 3 FlgL [Cellvibrio japonicus
Ueda107]
Length = 529
Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 14/161 (8%), Positives = 59/161 (36%), Gaps = 4/161 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T+ A+ + ++ +Q+++++G +V AD+ + + +
Sbjct: 3 VSTSQIYNIATLGISQAQSSVTKIQEQMATGKKVLSPADDPVAATTILQLNQELARTEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI----QSEITQLQSQL 119
I + + +++ ++ + + ++ ++ + +++ +E+ +L
Sbjct: 63 KKNIDIAENNLNLEESSLQTIVSLVQRMRQIAVSAGNTAVLTQADYAAYAAEVEARMDEL 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
++ + +G+ S+ + D G+
Sbjct: 123 LNLQNTRNASGQYIFAGYQSSTKPFTSDGGGNFSYLGDEGQ 163
Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ ++ +++ I A G +G+ + + D + + + L D D A S +L
Sbjct: 444 KTLTNLESAITNLAAVQGDVGARLNTLESSRDLNLDVTLTTKTVLSSLQDLDYAEASIQL 503
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLF 450
S A Q+ V+ LSLF
Sbjct: 504 SMQSFVLSAAQQSFVKVSQ-----LSLF 526
>gi|85859204|ref|YP_461406.1| flagellin and related hook-associated proteins [Syntrophus
aciditrophicus SB]
gi|85722295|gb|ABC77238.1| flagellin and related hook-associated proteins [Syntrophus
aciditrophicus SB]
Length = 403
Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/417 (9%), Positives = 104/417 (24%), Gaps = 49/417 (11%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N S + + + +++SS ++ +DN + + + +
Sbjct: 10 NMKYNSIIGNIFTVQNGYNCIMEKMSSQKSINRTSDNPMGMTRIFDFRKTKSFIEQYNRN 69
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGS 126
I + + +++ +S A D++S + S + +QS + ++ +
Sbjct: 70 IDSADAWLSSSESKLSAAGDLISKAREIAVREASSTATETSRKLSAENIQSLIDEMLSLA 129
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
+ ++ + + G + ++ + +S
Sbjct: 130 NSTLNGRYLFSGSATDTPPFSASELPARIEAAGGAEGNEFQGTVESQGHFTGTSNKTFAV 189
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
L + A+
Sbjct: 190 RIDEGGPLAEVEYSISLDGGKSWCAGKDDLSAGTVELGDGVQMAF--------------- 234
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
A P + KS + + D+ + ++T +T
Sbjct: 235 -----DDDGGAKPLSNGDLFYVKSYAAGYYCGNNEKLSVDVQRDSPVTYNLTGQEVFTGV 289
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
V D + +S + + IT + +
Sbjct: 290 GSDGVDIFKCLADLKKAMQNSDQQSIQAQIGNLEKAQNQITLNVSKC------------- 336
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
G+ +R+ + E + + V + + + DAD+ T+ +
Sbjct: 337 ----------------GTRQNRLEIAESNLADLELKVTELMSNIEDADLTQLVTQFT 377
>gi|18075615|emb|CAD11203.1| flagellin B [Helicobacter pylori]
Length = 461
Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 54/143 (37%), Gaps = 3/143 (2%)
Query: 41 ADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE 100
AD+++ +IA ++S + L V A M + I ++ TIK K +
Sbjct: 1 ADDSSGMAIADSLRSQSANLGQAIRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQ 60
Query: 101 RGTD---SKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157
G +++QS+I +L +L +IA +SFNG+ L + I +
Sbjct: 61 DGQTLESRRALQSDIQRLLEELDNIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASI 120
Query: 158 NGKVQITTIDYYLDPETVLLDSS 180
++ + +
Sbjct: 121 GSTSSDKIGHVRMETSSFSGEGM 143
Score = 74.0 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 27/85 (31%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ D+ +GS+ + + I + + V+ ++ D D
Sbjct: 377 VTSLKGAMIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVD 436
Query: 415 MASESTRLSALQTQQQLAVQALSIV 439
A ES S Q A++
Sbjct: 437 FAEESANFSKYNILAQSGSFAMAQA 461
>gi|90415311|ref|ZP_01223245.1| Flagellin, N-terminus [marine gamma proteobacterium HTCC2207]
gi|90332634|gb|EAS47804.1| Flagellin, N-terminus [marine gamma proteobacterium HTCC2207]
Length = 307
Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 19/162 (11%), Positives = 62/162 (38%), Gaps = 3/162 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T+ A ++ + + +Q ++++G +++ +D+ + Q + S
Sbjct: 3 VSTSQIFERAMTQMSNQQAKVADLQSKLATGQQIARPSDDPEKAGVIQRLSSALNRQEGF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
+ S++ + + A +++ ++ D + I +E++ L+ Q+
Sbjct: 63 ESNLMAFKSRLGAEEGALKSAENILQRMRELAVQAQSDTFSSADRQIIAAEVSALRDQML 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
+A + +G + SS + + D+ ++
Sbjct: 123 SLANTADASGNYIFAGAMVSSAPFGENENGDTVYQGDDSRMM 164
>gi|255021362|ref|ZP_05293410.1| Flagellar hook-associated protein flgL [Acidithiobacillus caldus
ATCC 51756]
gi|254969225|gb|EET26739.1| Flagellar hook-associated protein flgL [Acidithiobacillus caldus
ATCC 51756]
Length = 433
Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/448 (10%), Positives = 115/448 (25%), Gaps = 19/448 (4%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T S+ L + L + ++S+G + D + N ++ + + L+
Sbjct: 3 VSTPEFYQSSLSGLLNQQSTLNNLSQQLSTGNVLIDPSSNPVAYAQTLNLSARIANLNQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + ++ + + +++ ++ + +Q+ +T +Q L+ +
Sbjct: 63 QQSNNYAQQNLQLSSSTLQSVSTLINQVQQLAVQMNNGTVNGNDLQNAVTAMQGNLQQLV 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ ++ N GS + + + G T+ +
Sbjct: 123 QLANTQDANGSYIFGGSESNRPPFQLQSNGSVQYLGDSAQKTLQIGPGLSVPSSQAGNAI 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + GT + + A
Sbjct: 183 FMNVPAGNGTFTVVPSGSNYSASSGASSGNVGTTTLGPGAVVDAKAANDFFVAQGGQLVV 242
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
I+ L + ++ + S S + S S +P
Sbjct: 243 TISNGTSGLTYSVSSGVGSGMASSGIVASGTYTPGMSISVPSAGGASPMLSVSAAGEPAP 302
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
S + ++ + G + +
Sbjct: 303 GQSATFTLQPAGTQSIFQTFQNLIQALQAGSGSPGANTQR--------------AQGISN 348
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ + + IGS + + + + G L D T+
Sbjct: 349 ALANLSQFQTTLLSTQATIGSELQQAQNVSNLNTNLLQQFQTTQGNLQDVSYPQVITQFQ 408
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
T Q A +A V LSLF+
Sbjct: 409 QSSTALQAAQKAFVQVQG-----LSLFQ 431
>gi|28974949|gb|AAO61411.1| flagellin [Ralstonia sp. Pat3]
Length = 241
Score = 79.0 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 70/184 (38%), Gaps = 3/184 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ +N S++ Q L L+ R+S+GLRV+ A D+AA +++A + + + +
Sbjct: 1 LSLNSNISSLQTQQALSASKDALQTSLQRLSTGLRVNSAKDDAAAYAVASSLTTTLNSQT 60
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
S + A + + + + + ++ TD ++ E QL +
Sbjct: 61 QGIQNANNAQSYLQTADSYLGQVENNLQRMRQLAVEANNGGLSTTDQANLDKEYQQLATA 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
++I +++NG + S++ ++ N + +
Sbjct: 121 NKNIETNANYNGARLFDGSVTSTSFQYGQNASTDAATVTNANLASFGTLSGTSVTSTANA 180
Query: 179 SSTD 182
++
Sbjct: 181 TAAQ 184
Score = 41.7 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 33/104 (31%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ ++T + + L + + ID + AA
Sbjct: 138 GSVTSTSFQYGQNASTDAATVTNANLASFGTLSGTSVTSTANATAAQGKIDADLASLKAA 197
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+G+ S + + + A+ ++D D ASE++ +
Sbjct: 198 RADLGAQQSGLTSTINTLTSSNTALSAAKSVMIDTDYASETSNM 241
>gi|322807048|emb|CBZ04622.1| flagellar hook-associated protein FlgL [Clostridium botulinum
H04402 065]
Length = 385
Score = 79.0 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 44/133 (33%), Gaps = 4/133 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A S + + NL + +++SG S + + A + + + A
Sbjct: 3 ITNNMMANSFMSDMNNNLENLNRINQQLTSGKNFSKPSHDPAGVIRSMQLYTSIDANKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ I + +D+ + + + I++K+ G E L+ ++ I
Sbjct: 63 NKNISNVINWLDVTDTALDQIGKQLGKIRDKLEEAGNPGFGET----ERKALKDEVNGII 118
Query: 124 RGSSFNGENWLRT 136
S
Sbjct: 119 ASMSQTLNTTFDG 131
Score = 54.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 10/84 (11%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ ID + ++G+ +R+ ++ K + + + + D ++ ++ +
Sbjct: 301 LGNIDKALDNVLRIRAEVGAKQNRMDAAKEMNKETNFNMTEILSNIEDVNLVEKNMEFA- 359
Query: 425 LQTQQQLAVQALSIVNNSTARILS 448
Q + + +L ++A++L
Sbjct: 360 --ILQSVYISSL----QTSAKVLQ 377
>gi|218507733|ref|ZP_03505611.1| putative flagellin protein [Rhizobium etli Brasil 5]
Length = 110
Score = 79.0 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/60 (66%), Positives = 47/60 (78%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSILTN++AM+A Q LR +N +L+ Q RVSSG RV AADNAAYWSIA M+SDN AL
Sbjct: 11 MTSILTNNAAMAALQTLRGVNDSLKDTQGRVSSGYRVEKAADNAAYWSIATTMRSDNLAL 70
>gi|170726567|ref|YP_001760593.1| flagellin domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169811914|gb|ACA86498.1| flagellin domain protein [Shewanella woodyi ATCC 51908]
Length = 228
Score = 79.0 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 50/131 (38%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
L + +Q+++++GL+++ AAD A IA + S A + S
Sbjct: 11 LSHLERQQEERKKLQEKLATGLKINQAADAPAGSQIANRLTSSINAADNRTSNARDQQSI 70
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
++ + D + + D ++IQ+E+ QL ++ IA
Sbjct: 71 INTQAGQYASITDNLLRARELTIQAGNPVNDKQAIQAELDQLTEEINVIAEQVLGQSNFI 130
Query: 134 LRTDLGSSTAS 144
D + +A+
Sbjct: 131 PSLDASNPSAA 141
Score = 44.0 bits (101), Expect = 0.057, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 31/85 (36%)
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
+N + S I+T A A G S + Q + ++ +
Sbjct: 126 QSNFIPSLDASNPSAAQSDIETASTTIDANASAGGVQSRGLDSQINLYQISSTNNQAARS 185
Query: 409 RLVDADMASESTRLSALQTQQQLAV 433
R+ D D A ++ L + Q ++AV
Sbjct: 186 RIQDTDYAQSASDLLRTELQLKIAV 210
>gi|28974937|gb|AAO61405.1| flagellin [Ralstonia pickettii]
Length = 241
Score = 79.0 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 66/172 (38%), Gaps = 3/172 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ +N S++ Q L L R+S+GLRV+ A D+AA +++A + + + +
Sbjct: 1 LSLNSNISSLQTQQALSQSQSALHTSLQRLSTGLRVNSAQDDAAAYAVASSLTTTLNSQT 60
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
S + A + + + + + ++ TD ++ E +L +
Sbjct: 61 QGIQNSNQAMSYLQTADSYLGQVENNLQRMRQLAVEANNGGLSTTDQANLDKEYQKLATA 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL 170
++I +++NG + S+T ++ N +
Sbjct: 121 NKNIETNANYNGNKLFDGSVTSTTFQYGQNAATDVTSVSNADLSTFGTLSGT 172
Score = 41.7 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 38/109 (34%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + S L+ + + + IDT +
Sbjct: 133 NKLFDGSVTSTTFQYGQNAATDVTSVSNADLSTFGTLSGTSVTSTANATAAQAAIDTDLT 192
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
AA +G+ S ++ + + A+ L+D D ASE++ +
Sbjct: 193 NLKAARANLGAQQSGLNSTINTLTSNNTALSAAKSSLIDTDYASETSNM 241
>gi|216264188|ref|ZP_03436180.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 156a]
gi|224534091|ref|ZP_03674674.1| flagellar hook-associated protein 3 [Borrelia burgdorferi CA-11.2a]
gi|225549797|ref|ZP_03770761.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 118a]
gi|215980661|gb|EEC21468.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 156a]
gi|224512790|gb|EEF83158.1| flagellar hook-associated protein 3 [Borrelia burgdorferi CA-11.2a]
gi|225369605|gb|EEG99054.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 118a]
gi|312149722|gb|ADQ29793.1| flagellar hook-associated protein 3 [Borrelia burgdorferi N40]
Length = 424
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/400 (9%), Positives = 100/400 (25%), Gaps = 27/400 (6%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G R+ ++ + + +D L+ I S + + + ++++ K
Sbjct: 36 GKRIVKLRNDPTGVTHTIRLDNDIFKLNVYIKNIDTSKSNLRYTEGYLQSLTNILTRAKE 95
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
G +S + ++ + L D+ ++ G + G+ S A V
Sbjct: 96 IAIQGASGTYESDDKKMISKEVNALLEDVVAIANAKGPDGYSIFSGTKIDSEAFKVTREN 155
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
K ++ + T+
Sbjct: 156 KISKTSKDGAGPQIIKVEYNGNQAEKKTEVYNDIH------------------------- 190
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + ++ + + + +
Sbjct: 191 --MSNNYPGNVIFFLQNQNIISSINTNGFAVKENTKIYIDNIEIGLTAGDTALDIVAKIN 248
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+SA + + + + + T L
Sbjct: 249 ESSAPVEASIDPVLNSLSIKTTTPHQIWITEEKESNVLQTLGILTKNNDTKLPPYNLSSS 308
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
S+ I E+L ++ ID +K + +G+ +R+
Sbjct: 309 TEVRSRSIFDALIELRDTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSY 368
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ I +++ + + D D+ T L+ Q+++
Sbjct: 369 ERISKEAADMKEDMIQYTDLDVTKAITNLNMASLAYQVSI 408
>gi|330808202|ref|YP_004352664.1| flagellar hook-associated protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327376310|gb|AEA67660.1| flagellar hook-associated protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 521
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 53/508 (10%), Positives = 114/508 (22%), Gaps = 74/508 (14%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ S + + + + SS +RV+ AAD+ S + + LS
Sbjct: 3 ISTSQFYESTAANYQKNFAKVVKTSEEASSLVRVNTAADDPVGASRLLQLGNQASMLSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ + + +A M+ +V+ K + D K++ SE+ ++ QL
Sbjct: 63 EANVTTIKATLGTTEAVMTSIGNVLQRAKELAVSAGNAAYTDADRKAVASELGSIEDQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ NG+ G D + + D
Sbjct: 123 SLMNTKDENGKYIFSGSKGDVVPFTRNDDGTYSYNGDQVTLDLPIGDTMSMATNSTGWEV 182
Query: 181 TDGTERYGLLDRNHKIKVEP--------------------------------QVLKDIDV 208
+
Sbjct: 183 FQQAVNTSRSQVTMTAPAVDDGRVVLTNGQVSSSVTYNSQFRSGEPYTVEFVSGTQLKIT 242
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
T K + + + + + A P T +
Sbjct: 243 DSGGNDVTAEASKGGVIEPNNQIGQTVSFRGVDLTLNVNLQAGDVAGTVLPGHTFTLAAK 302
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
A + + T + + + + T + + DS+
Sbjct: 303 PDTFTPARSPGNTTATQITGSQITDPVAYHASFPTGAAVLKFTSATDFDLYAAPLNADSK 362
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG----- 383
+ + + A N++ ++ + +
Sbjct: 363 PVSSGTLAGNVATASGVSFTLNGAVAANDQFSIAVNTHETQNVLDTVNQLRTALNTPTDG 422
Query: 384 ---SISS---RIHLQEDFIKLMRDAVEKGVGR---------------------------- 409
+I + + D + +
Sbjct: 423 DNIAIQKLNASLASAIGNLASGTDQLTSALSSVGGRGQSLDTQSDTNQSFVLANTQTQSA 482
Query: 410 LVDADMASESTRLSALQTQQQLAVQALS 437
+ D+D A TRL+ QT Q + A S
Sbjct: 483 IRDSDAAEVMTRLTLQQTMLQASQLAFS 510
>gi|261409643|ref|YP_003245884.1| flagellar hook-associated protein 3 [Paenibacillus sp. Y412MC10]
gi|261286106|gb|ACX68077.1| flagellar hook-associated protein 3 [Paenibacillus sp. Y412MC10]
Length = 298
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 48/138 (34%), Gaps = 5/138 (3%)
Query: 11 MSASQKLRDINYNLEVV---QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R+IN NL + + +S+G++++ +D+ + + +S+
Sbjct: 9 MMNLQMIRNINTNLVRMDGNMNVLSTGMKLNKPSDDPVGITYSLRYRSELSFNDQYQKNA 68
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIAR--G 125
S ++ + + ++ I V + + + +L+ +
Sbjct: 69 DTALSWLEYTDTVIGQVNEISQRANELIVNAVNGTNPQEGLDAINIELKQIYEQLISLGN 128
Query: 126 SSFNGENWLRTDLGSSTA 143
S FN + L
Sbjct: 129 SKFNDKYIFNGQLTDQAP 146
Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/283 (9%), Positives = 76/283 (26%)
Query: 152 SFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+R G + + I + + + L + L+ +
Sbjct: 1 MALRVTPGMMNLQMIRNINTNLVRMDGNMNVLSTGMKLNKPSDDPVGITYSLRYRSELSF 60
Query: 212 DASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
+ + + Q + P +
Sbjct: 61 NDQYQKNADTALSWLEYTDTVIGQVNEISQRANELIVNAVNGTNPQEGLDAINIELKQIY 120
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
S + + I+ T + G T+ + + + ++
Sbjct: 121 EQLISLGNSKFNDKYIFNGQLTDQAPYDKVLAPTQGTDLHGITYKFTEGATLNINVTGQD 180
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
S + + R ++K A + + +++ A +IG+ ++R+ L
Sbjct: 181 VFGEPSDPDNLFSILNRVQAALTIDDKAAARTELDNLSSRLSKINEARSEIGAKTNRVDL 240
Query: 392 QEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ + + + ++ DAD A +L ++ Q ++
Sbjct: 241 IFNRLGDLEINLTAMQAKVEDADYAETIMKLKQDESVYQASLA 283
>gi|158425003|ref|YP_001526295.1| putative flagellin A protein [Azorhizobium caulinodans ORS 571]
gi|158331892|dbj|BAF89377.1| putative flagellin A protein [Azorhizobium caulinodans ORS 571]
Length = 352
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 64/203 (31%), Positives = 98/203 (48%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI+TN++A A LR IN +L DRVS+G +++ AAD AAYW+I+ + SDNGAL
Sbjct: 1 MTSIITNNAASVALATLRSINDSLNTTNDRVSTGKKINSAADGAAYWNISTTLTSDNGAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV DAI L S V G+++ ++ ++TIK + + D S+Q I S +
Sbjct: 61 GAVKDAINLDMSSVKTTNTGLTQIMNSLNTIKQALVSAQSSTADRTSLQKNIANAVSDIS 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A + NG NWL D ++ + KS++ +F R TT ++
Sbjct: 121 SAASSAVVNGANWLSVDSSATGFNANKSLLANFSRASGVVTVGTTTLDTGAFAVYDAKTN 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVL 203
+ T +D +
Sbjct: 181 STSTGTSSTIDTAVTAVATSASV 203
Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 62/352 (17%), Positives = 120/352 (34%)
Query: 100 ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
+ + S + D ++ + + + A+ +
Sbjct: 1 MTSIITNNAASVALATLRSINDSLNTTNDRVSTGKKINSAADGAAYWNISTTLTSDNGAL 60
Query: 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
I+ + T + + + + + +
Sbjct: 61 GAVKDAINLDMSSVKTTNTGLTQIMNSLNTIKQALVSAQSSTADRTSLQKNIANAVSDIS 120
Query: 220 KKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
A +GA + +++ ++ A + T + + +V + T
Sbjct: 121 SAASSAVVNGANWLSVDSSATGFNANKSLLANFSRASGVVTVGTTTLDTGAFAVYDAKTN 180
Query: 280 IRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGY 339
+ + TS TVA N TT + + +
Sbjct: 181 STSTGTSSTIDTAVTAVATSASVSGGLTVAVGTNAGNLKGFMDTTYSISGSVGGTTVAAF 240
Query: 340 SMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
+ NI + T + + + + + I A + +G+ +R+ Q++F + +
Sbjct: 241 TASIANIDISSLTSSDVDLAKLSSYMKIVSATIDGLQAGSTALGTTQTRLTSQQNFAQSL 300
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D +G LVDA+M EST+L ALQTQQQLAVQ+LSI NNST+ I++LFR
Sbjct: 301 IDINTSSIGSLVDANMEEESTKLKALQTQQQLAVQSLSIANNSTSNIMTLFR 352
>gi|260901963|ref|ZP_05910358.1| A-type flagellin [Vibrio parahaemolyticus AQ4037]
gi|308106776|gb|EFO44316.1| A-type flagellin [Vibrio parahaemolyticus AQ4037]
Length = 86
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 40/83 (48%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ TN SAM+A + L + N + +R+SSG +++ A D+AA I+ + + L
Sbjct: 4 NVNTNVSAMTAQRYLNNANSAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAI 85
G S A+ M++
Sbjct: 64 AVRNANDGISIAQTAEGAMNETT 86
>gi|86358414|ref|YP_470306.1| flagellin C protein [Rhizobium etli CFN 42]
gi|86282516|gb|ABC91579.1| flagellin C protein [Rhizobium etli CFN 42]
Length = 332
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 68/255 (26%), Positives = 111/255 (43%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI S +A LRDIN N+ V Q+ +++G+RV+ AADNA YWSIA ++DN A+SA
Sbjct: 2 SIYQRVSVDAALHVLRDINRNMTVTQNHITTGMRVAKAADNAVYWSIATTARTDNKAISA 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
+ DA+G+ ++ + A G+ IDV+S IK K+ A E G D I E+ QLQ QLR +
Sbjct: 62 IQDALGMAAATMGTAYTGVQNVIDVVSEIKAKLVAATENGVDKNKINEELKQLQEQLRSV 121
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ ++FN +NW+ + ++ + D + + S
Sbjct: 122 SESATFNSDNWVILNNDATPTQPRQIPASFIRNSDGTVSIGMLSYHIDNTPVGATSSKDA 181
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + V ++ +++K A L AA
Sbjct: 182 RYLIDDRATGSGEYGVLTSAYFATELGTAQNYVLMTSKNGTTAGQVVISLSAATTQGQIG 241
Query: 243 KGIATIPVPLPAAPA 257
+ I+ + L
Sbjct: 242 EMISVVDAALTQLTT 256
Score = 66.3 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/312 (18%), Positives = 100/312 (32%), Gaps = 1/312 (0%)
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ ++ ++ I + +R T S
Sbjct: 20 NRNMTVTQNHITTGMRVAKAADNAVYWSIATTARTDNKAISAIQDALGMAAATMGTAYTG 79
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
Q + D+ + + + + ++
Sbjct: 80 VQNVIDVVSEIKAKLVAATENGVDKNKINEELKQLQEQLRSVSESATFNSDNWVILNNDA 139
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
T + + S + +G + T + +S G+ Y V
Sbjct: 140 TPTQ-PRQIPASFIRNSDGTVSIGMLSYHIDNTPVGATSSKDARYLIDDRATGSGEYGVL 198
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
T + + T + A + + EM+S +D + T
Sbjct: 199 TSAYFATELGTAQNYVLMTSKNGTTAGQVVISLSAATTQGQIGEMISVVDAALTQLTTVG 258
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
G++ RI LQ DF + D + G+GRLVDADM ES+RL ALQTQQQL +Q+L+I
Sbjct: 259 SAFGALEKRIELQNDFATQLHDNITAGIGRLVDADMEEESSRLRALQTQQQLGLQSLNIA 318
Query: 440 NNSTARILSLFR 451
N + + LF+
Sbjct: 319 NATYDTVRQLFQ 330
>gi|219684714|ref|ZP_03539657.1| flagellar hook-associated protein 3 [Borrelia garinii PBr]
gi|219685804|ref|ZP_03540613.1| flagellar hook-associated protein 3 [Borrelia garinii Far04]
gi|219672076|gb|EED29130.1| flagellar hook-associated protein 3 [Borrelia garinii PBr]
gi|219672637|gb|EED29667.1| flagellar hook-associated protein 3 [Borrelia garinii Far04]
Length = 424
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/404 (9%), Positives = 100/404 (24%), Gaps = 29/404 (7%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G R+ ++ + A + SD L+ IG + + + ++++ K
Sbjct: 36 GKRIVKLRNDPTGVTHAIRLDSDIFKLNVYIKNIGTSKGNLRYTEGYLQSLTNILTRAKE 95
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
G ++ + ++ + L D ++ G + G+ S A V
Sbjct: 96 IAIQGASGTYEADDKKMISKEVNALLEDAIAIANAKGPDGYSIFSGTKIDSEAFKVTREN 155
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
K ++ + T+ +
Sbjct: 156 KISKISKDGEGPQIIKVEYNGNQAEKKTEVYNDVHIS----------------------- 192
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ ++ + + + +
Sbjct: 193 ----NNYPGNKIFFLQNQNIISSINTNGFTVKENTKIYIDNVEIGLTAGDTALDIVAKIN 248
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+SA + + + + + T L
Sbjct: 249 ESSAPVEASVDPVLNSLSIKTTTPHQIWITEAKESNVLQTLGILTKNNDTKLPPYNLSSS 308
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
S+ I E+L ++ ID +K + +G+ +R+
Sbjct: 309 TEVRSRSIFDALIELRDTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSY 368
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ--LAVQA 435
+ I +++ + + D D+ T L+ Q L + A
Sbjct: 369 ERISKEAADMKEDMVQYTDLDVTKAITNLNMASLAYQVSLGISA 412
>gi|18075613|emb|CAD11202.1| flagellin B [Helicobacter pylori]
Length = 461
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 54/143 (37%), Gaps = 3/143 (2%)
Query: 41 ADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE 100
AD+++ +IA ++S + L V A M + I ++ TIK K +
Sbjct: 1 ADDSSGMAIADSLRSQSANLGQAIRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQ 60
Query: 101 RGTD---SKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157
G +++QS+I +L +L +IA +SFNG+ L + I +
Sbjct: 61 DGQTLESRRALQSDIQRLLEELDNIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASI 120
Query: 158 NGKVQITTIDYYLDPETVLLDSS 180
++ + +
Sbjct: 121 GSTSSDKIGHVRMETSSFSGEGM 143
Score = 74.4 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/269 (8%), Positives = 69/269 (25%)
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
T+ + +S + G ++ ++ +I + +
Sbjct: 193 FSNTLGVRASYNVMATGGTPVQSGTVRELTINGVEIGTVNDVHKNDADGRLTNAINSVKD 252
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVR 290
+ Q + + A + + G + + + + +G +
Sbjct: 253 RTGVEASMDIQGRINLHSIDGRAISVHAASASGQVFGGGNFAGISGTQHAVIGRLTLTRT 312
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
++ + G Y V+ + ++ + +
Sbjct: 313 DARDIIVSGVNFSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQG 372
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
++ D+ +GS+ + + I + + V+ ++
Sbjct: 373 IGAGVTSLKGAMIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQI 432
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIV 439
D D A ES S Q A++
Sbjct: 433 RDVDFAEESANFSKYNILAQSGSFAMAQA 461
>gi|311070046|ref|YP_003974969.1| flagellar hook-associated protein FlgL [Bacillus atrophaeus 1942]
gi|310870563|gb|ADP34038.1| flagellar hook-associated protein FlgL [Bacillus atrophaeus 1942]
Length = 298
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 56/140 (40%), Gaps = 3/140 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++ + + L+ +Q +VSSG ++S A+D+ + + +
Sbjct: 10 QNSLRYIGSSYAKLDKLQSQVSSGKKISKASDDPIVAMKSLKYNTQLSQVKQYQSNASQA 69
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIARGSS 127
+ ++ + +++ IDV+S +++ + ++S E+ QL+ QL +IA
Sbjct: 70 FTWLENTETNITEGIDVLSKVRDLVVKAKNGQNGEAELKSIGVEVNQLKEQLLNIANTQV 129
Query: 128 FNGENWLRTDLGSSTASIAK 147
+ T+ S
Sbjct: 130 NGRYIFNGTNSDSPPVVDNG 149
Score = 41.7 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 37/123 (30%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
N + + K + V + N ++ +S ID
Sbjct: 162 NVNISSNMTLKVNSDPKSAFGGTSASGQNVFEMLDSLENALNSGSVDDLKSTLSDIDQFT 221
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+A IG+ +R+ L ++ + K + D ++ T A + + A
Sbjct: 222 DGMSAERSDIGARYNRLELINTRLETQEETATKVLSDNEDVELEKVITDFIAQASVHRAA 281
Query: 433 VQA 435
+
Sbjct: 282 LAV 284
>gi|187778687|ref|ZP_02995160.1| hypothetical protein CLOSPO_02282 [Clostridium sporogenes ATCC
15579]
gi|187772312|gb|EDU36114.1| hypothetical protein CLOSPO_02282 [Clostridium sporogenes ATCC
15579]
Length = 320
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/202 (13%), Positives = 60/202 (29%), Gaps = 4/202 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A S + + NL+ ++ +++SG S + + A + + S A
Sbjct: 3 ITNNMMANSFMTDMNNNLENLDRIRQQLTSGKNFSKPSHDPAGVIRSMQLYSGIDANKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ I + +D+ + + + I++K+ G E L+ ++ I
Sbjct: 63 NKNISNVINWLDVTDTALDQVGKQLGKIRDKLEEAGNPGFGET----ERKALKDEVNGII 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
S S + G I ++
Sbjct: 119 ASMSQTLNTTFDGKYIFSGTRVTGKPTGVQKDATTKNNSIDYVNKDGSIPLDPAGDEYKQ 178
Query: 184 TERYGLLDRNHKIKVEPQVLKD 205
E+ + + + +E V
Sbjct: 179 MEQKLKAEISEGVVMEYNVTAT 200
Score = 54.0 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 10/88 (11%), Positives = 36/88 (40%), Gaps = 7/88 (7%)
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + ID + ++G+ +R+ ++ K + + + + D ++ ++
Sbjct: 232 YGDDLGNIDKALDNVLRIRAEVGAKQNRMDAAKEMNKETNFNMTEILSNIEDVNLVEKNM 291
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILS 448
+ Q + + +L ++A++L
Sbjct: 292 EYA---ILQSVYISSL----QTSAKVLQ 312
>gi|221635455|ref|YP_002523331.1| flagellar hook-associated protein 3 [Thermomicrobium roseum DSM
5159]
gi|221157287|gb|ACM06405.1| flagellar hook-associated protein 3 [Thermomicrobium roseum DSM
5159]
Length = 291
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 13/117 (11%), Positives = 39/117 (33%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ L +E V +++S R+S +D+ + + S + + +
Sbjct: 13 LKNLSGNLARMERVYQQITSARRISRPSDDPVGTATVLRLGSAAQEIEQYLANVEQARTW 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+D+ ++ + + + + Q+ +L + IA ++
Sbjct: 73 LDLTDQALTTIGQSLQRARELVVQAANDTLSADDRQAIWQELTALQEQIATTGNYAH 129
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 36/85 (42%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
N+ +A+ ++ ID AA +G+ +R+ Q D + + + D D
Sbjct: 197 ANDPVAIRSQLAAIDAAHTQLLAAQASVGARVNRLEAQRDRLLDAHTSTLRLASEAGDTD 256
Query: 415 MASESTRLSALQTQQQLAVQALSIV 439
MA TR S + + A+QA +
Sbjct: 257 MAEAITRFSKEELTYRAALQAGARA 281
>gi|168333625|ref|ZP_02691885.1| flagellar hook-associated protein FlgL [Epulopiscium sp. 'N.t.
morphotype B']
Length = 381
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/257 (11%), Positives = 75/257 (29%), Gaps = 4/257 (1%)
Query: 1 MTSILTNHSAMS-ASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M+ +TN+ A L + L+ + ++S+ ++ +D+ + ++ D
Sbjct: 1 MSMRITNNMVQYGAMNALFNNMEQLDKIYMQMSTLKKIERPSDDPIIAGRSLKLRIDVTE 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQ 116
S ++I+ +S +++ +K ++ + + +I QL
Sbjct: 61 AEQYEQNTKEAMSWMEISDGAISNMEEILKEVKTRLNQASTGALTQEDKEKILSDILQLS 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
Q++D S + + + + I + ++ T+
Sbjct: 121 EQIKDELNTSYAGRFVFSGHKIDQPVYYDVDTTLAKNITSSIDIQLSEDMKVGINGLTLT 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
G +V + + V S F T A +
Sbjct: 181 SPMVVPKATTLGGTPYAAGEEVPANTIFNPGEVVPKGSFIPKGTVFTAETEIPASTANPD 240
Query: 237 ATFDQAKGIATIPVPLP 253
+ A + +
Sbjct: 241 VVGNTADQDIRYEIGVG 257
Score = 43.6 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 33/363 (9%), Positives = 81/363 (22%), Gaps = 1/363 (0%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+ M+ + M + + I +S I + E +
Sbjct: 10 VQYGAMNALFNNMEQLDKIYMQMSTLKKIERPSDDPIIAGRSLKLRIDVTEAEQYEQNTK 69
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ S I + L E S + D +
Sbjct: 70 EAMSWMEISDGAISNMEEILKEVKTRLNQASTGALTQEDKEKILSDILQLSEQIKDELNT 129
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
V + +T + ++ L + + V A
Sbjct: 130 SYAGRFVFSGHKIDQPVYYDVDTTLAKNITSSIDIQLSEDMKVGINGLTLTSPMVVPKAT 189
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
+ + ++ + G+ T + V +
Sbjct: 190 TLGGTPYAAGEEVPANTIFNPGEVVPKGSFIPKGTVFTAETEIPASTANPDVVGNTADQD 249
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ + + + + ++ + ++ ID
Sbjct: 250 IRYEIGVGIELEINETHLSDIFVGNYEKV-VDNIVEAVEMDDIERLSALIEDIDKTRSAL 308
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ GS R+ L + + + + + D D+ +A Q A++A
Sbjct: 309 SERMADGGSRQVRLELTQRKMAEDQVTFTELLSETEDVDIEEIFVEFNAQMMVYQSALKA 368
Query: 436 LSI 438
S
Sbjct: 369 SSQ 371
>gi|322432964|ref|YP_004210213.1| flagellin domain protein [Acidobacterium sp. MP5ACTX9]
gi|321165191|gb|ADW70895.1| flagellin domain protein [Acidobacterium sp. MP5ACTX9]
Length = 272
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 64/150 (42%), Gaps = 3/150 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SIL N SA+ A +L ++SSG R++ +D+AA +I+ + ++ AL+
Sbjct: 3 LSILNNISALQAENQLSITTAAANKSLQQLSSGSRINSGSDDAAGLAISDGLNANVAALN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQSQ 118
S + A +++ +++ T S +I +E L +Q
Sbjct: 63 QSSLNATNAVGSLQTADGALAQVTALLNRSVTLATEASNTGLSSAQSTAINNEFQALLTQ 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKS 148
+ +I ++FNG + + + T+ +
Sbjct: 123 IGNIGTSTNFNGTAVFGSTVSAFTSDGTTN 152
Score = 50.5 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 38/138 (27%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T + T S G + N + ++ I I
Sbjct: 135 TAVFGSTVSAFTSDGTTNGTVSIGGAVAALTTTSLGLNASTLATSSGAQAALTVITAAIS 194
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+A G +G+ ++ + + AD+++ + QQ +
Sbjct: 195 TVSAQRGTLGATVEQLQAASTVDTNESQNLVSASSNITSADISTVVANDTKYSILQQTGI 254
Query: 434 QALSIVNNSTARILSLFR 451
AL N +L L +
Sbjct: 255 SALQQANQQAQTVLKLLQ 272
>gi|28974935|gb|AAO61404.1| flagellin [Ralstonia pickettii]
Length = 241
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 66/172 (38%), Gaps = 3/172 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ +N S++ Q L L R+S+GLRV+ A D+AA +++A + + + +
Sbjct: 1 LSLNSNISSLQTQQALSQSQSALHTSLQRLSTGLRVNSAQDDAAAYAVASSLTTTLNSQT 60
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
S + A + + + + + ++ TD ++ E +L +
Sbjct: 61 QGIQNSNQAMSYLQTADSYLGQVENNLQRMRQLAVEANNGGLSTTDQANLDKEYQKLATA 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL 170
++I +++NG + S+T ++ N +
Sbjct: 121 NKNIETNANYNGNKLFDGSVTSTTFQYGQNAATDVTSVSNANLSTFGTLSGT 172
Score = 41.3 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 38/109 (34%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + S L+ + + + IDT +
Sbjct: 133 NKLFDGSVTSTTFQYGQNAATDVTSVSNANLSTFGTLSGTSVTSTANATAAQAAIDTDLT 192
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
AA +G+ S ++ + + A+ L+D D ASE++ +
Sbjct: 193 NLKAARANLGAQQSGLNSTINTLTSNNTALSAAKSSLIDTDYASETSNM 241
>gi|150019086|ref|YP_001311340.1| flagellin domain-containing protein [Clostridium beijerinckii NCIMB
8052]
gi|149905551|gb|ABR36384.1| flagellin domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 278
Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 71/205 (34%), Gaps = 3/205 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N + + + + +S+G +++ A DN + A+ +K + + A
Sbjct: 3 LSHNMFSEGIYKNYKRTLVKNSNAMNNISTGKKLNSAKDNPNKIAQAENLKINLLSRDAA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S I +S + + + + +S +K D IQ EI +++ +
Sbjct: 63 SQNIQDTNSMLQTFDGALQEMNNNISRLKQLTVQAANGTNEPEDRAVIQKEIDKIKEDMN 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +SFNG + ++ + +S IG+ + + + + ++
Sbjct: 123 YIANNTSFNGIVMSDSTATATAPNNKQSTIGALPDEKVDIPIYNLTNIATGIDQIDVNDP 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
T +D +
Sbjct: 183 TKLNSNLKWVDDAGNTISSIRSKYG 207
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 54/157 (34%)
Query: 294 KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD 353
K + T+ + ++ + + LP E NI +
Sbjct: 118 KEDMNYIANNTSFNGIVMSDSTATATAPNNKQSTIGALPDEKVDIPIYNLTNIATGIDQI 177
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
N+ + + ++D ++ K G+I SR+ D I M + + + DA
Sbjct: 178 DVNDPTKLNSNLKWVDDAGNTISSIRSKYGAIQSRLDNTLDDISGMNGPLTSALSSIEDA 237
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D+A ES S Q Q ++ + N L++
Sbjct: 238 DIAQESLEFSRTQIIYQASISLMVQSNKLPQDALNVL 274
>gi|37360928|dbj|BAC98373.1| flagellin [Burkholderia glumae]
Length = 302
Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 83/293 (28%)
Query: 159 GKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+ L + + + + L D + +
Sbjct: 10 STLATQAATGTLSSSDQAAAEKEVAQQIQEVNRIAAQTNFNGKNLLDGSAGIVTFQIGAN 69
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
+ S + A G + + A T+ + + S
Sbjct: 70 VGQTVSLDLSQSLSAAKIGGGLVQSGTNVGTIQNMSLDANGAATTAAQPAITSVNVLSDG 129
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
+D +A + ++ + + T+ + T +T+ + +
Sbjct: 130 KGGFTFTDQNGQALSTTAVGAIFTTGTAAGTGTAVTNLTLATGATSGMTTAQASAAANMI 189
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ ++N ++ N + + + + + +G+ +R+ +
Sbjct: 190 SQINSVNAPPTVSSLNINNATSANQAIVSVANALSTINNLQATLGATQNRLQGIAQTQQA 249
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ AD A E+ LS Q QQ + L+ N+ ++L L +
Sbjct: 250 NSTNLSSAQSQIQSADFAQETAALSKAQVLQQAGISVLAQANSLPQQVLKLLQ 302
>gi|304317610|ref|YP_003852755.1| flagellar hook-associated protein 3 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779112|gb|ADL69671.1| flagellar hook-associated protein 3 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 295
Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/181 (11%), Positives = 54/181 (29%), Gaps = 3/181 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N M+ L+ Q+ + +G +VS +D+ + +K++ A
Sbjct: 3 VTNNMLVMNFMSDYNSNLERLQKDQNMLFTGKKVSKPSDDPVAVANTLKIKTEIARNDAY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQ---SEITQLQSQLR 120
+ S + + + + D++ + ++ G +Q +++ QL+ Q+
Sbjct: 63 TKNTDDAKSWLSLTDTALGQIGDLLQSARDLAVQGSNGTLTQSDMQNLAAQVDQLKQQII 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + S G + D +
Sbjct: 123 QVGNTQYNGRYIFAGYKTNRKPFSDTNRYAGDDGAIQFEIGAGGNTIQVNVTGDKVFDVT 182
Query: 181 T 181
+
Sbjct: 183 S 183
Score = 47.0 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 25/264 (9%), Positives = 59/264 (22%)
Query: 159 GKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+ + + L + + + V I +
Sbjct: 5 NNMLVMNFMSDYNSNLERLQKDQNMLFTGKKVSKPSDDPVAVANTLKIKTEIARNDAYTK 64
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
+ S + + +
Sbjct: 65 NTDDAKSWLSLTDTALGQIGDLLQSARDLAVQGSNGTLTQSDMQNLAAQVDQLKQQIIQV 124
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
N N + + ++ D ++ SG
Sbjct: 125 GNTQYNGRYIFAGYKTNRKPFSDTNRYAGDDGAIQFEIGAGGNTIQVNVTGDKVFDVTSG 184
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
S + + +N + + ++ ID Q++ A G+ ++RI L + +
Sbjct: 185 TSQLLNVMDNLSNALKSGDNQTVSNIIGDIDNQLQNVLAIRADAGAKANRIDLTANRLSD 244
Query: 399 MRDAVEKGVGRLVDADMASESTRL 422
+ + DAD+A T L
Sbjct: 245 DNYNFTALLSKNQDADIAQVITNL 268
>gi|51598443|ref|YP_072631.1| flagellar hook-associated protein FlgL [Borrelia garinii PBi]
gi|51573014|gb|AAU07039.1| flagellar hook-associated protein 3 [Borrelia garinii PBi]
Length = 424
Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/404 (10%), Positives = 100/404 (24%), Gaps = 29/404 (7%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G R+ ++ + A + SD L+ IG + + + ++++ K
Sbjct: 36 GKRIVKLRNDPTGVTHAIRLDSDIFKLNVYIKNIGTSKGNLRYTEGYLQSLTNILTRAKE 95
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
G ++ + ++ + L D ++ G + G+ S A V
Sbjct: 96 IAIQGASGTYEADDKKMISKEVNALLEDAIAIANAKGPDGYSIFSGTKIDSEAFKVTREN 155
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
K ++ + T+ + + +
Sbjct: 156 KISKISKDGEGPQIIKVEYTGNQAEKKTEVYNDVH-----ISNNYSGNKIFFLQNQNIIS 210
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
S + K T T + +AP + + +
Sbjct: 211 SINTNGFTVKENTKIYIDNVEIGLTTGDTALDIVAKINESSAPVEASIDPVLNSLSIKTT 270
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ T L
Sbjct: 271 TPH----------------------QIWITEAKESNVLQTLGILTKNNDTKLPPYNLSSS 308
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
S+ I E+L ++ ID +K + +G+ +R+
Sbjct: 309 TEVRSRSIFDALIELRDTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSY 368
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ--LAVQA 435
+ I +++ + + D D+ T L+ Q L + A
Sbjct: 369 ERISKEAADMKEDMVQYTDLDVTKAITNLNMASLAYQVSLGISA 412
>gi|28974939|gb|AAO61406.1| flagellin [Ralstonia pickettii]
Length = 241
Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 70/184 (38%), Gaps = 3/184 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ +N S++ Q L L+ R+S+GLRV+ A D+AA +++A + + + +
Sbjct: 1 LSLNSNISSLQTQQALSQSQSALQTSLQRLSTGLRVNSAKDDAAAYAVASSLTTTLNSQT 60
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
S + A + + + + + ++ TD ++ E QL +
Sbjct: 61 QGIQNANNAQSYLQTADSYLGQVENNLQRMRQLAVEANNGGLSTTDQANLDKEYQQLATA 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
++I +++NG + S+T ++ N + +
Sbjct: 121 NKNIETNANYNGAKLFDGSVTSTTFQYGQNSATDVATVTNANLASFGTLSSTSVTSTANA 180
Query: 179 SSTD 182
++
Sbjct: 181 TAAQ 184
Score = 41.3 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 35/104 (33%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ ++T + + L ++ + + ID + AA
Sbjct: 138 GSVTSTTFQYGQNSATDVATVTNANLASFGTLSSTSVTSTANATAAQAKIDADLASLKAA 197
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+G+ S + + + A+ +VD D ASE++ +
Sbjct: 198 RADLGAQQSGLSSTINTLTSSNTALSAAKSAMVDTDYASETSNM 241
>gi|87119669|ref|ZP_01075566.1| putative flagellar synthesis; flagellar regulon; hook-associated
protein [Marinomonas sp. MED121]
gi|86165145|gb|EAQ66413.1| putative flagellar synthesis; flagellar regulon; hook-associated
protein [Marinomonas sp. MED121]
Length = 407
Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/447 (9%), Positives = 115/447 (25%), Gaps = 45/447 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N + L N Q R++ + A+D+ + ++ N L
Sbjct: 3 VSNNFIYDQSLTDLTKSNERYLHTQRRIAENTDIMKASDDPVGAAQVMRYEAVNLLLDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
S+ + + ++ + + D+ + + + + +LQ A
Sbjct: 63 SENAVMAKNSLEYEEVVLDGITDIFNRANILLIQAENGAYGDDDLGAIAEELQMLTLAAA 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ + G + A + + G + + DS
Sbjct: 123 DLMNSTDSSGNHIFSGHESTRTAFELKPDGRYEFAGDEGRKKLQISDNVTVSGADS---- 178
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
K + +A
Sbjct: 179 ------------------------------------GKTVFEDVWTRNNFSYLPLVGEAD 202
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ S +++ + +G++ + + +
Sbjct: 203 VRTEVADQDVYDDFLQKNYSAIDSTQNVFAFTTVAGAGLGDTFALTNSAGEVVASGPFEA 262
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+T + S ++ TL + + T Y K A+ +
Sbjct: 263 GKPIDMFGMRLTIEGAAGTTGVISFDKPERDNVLNEMNKTLKVLLNPETGFYERKAALRD 322
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ + A ++G+ + I + ++ + + D+A ++ L+
Sbjct: 323 ASVSVRNTMNSVDTARSEVGANLNTIAQVGSYGEMKSISNRVAQDEIAGLDIAEAASELA 382
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLF 450
Q++ A+ + S + LSLF
Sbjct: 383 ----QEEAAISS-SQKLFNRLSNLSLF 404
>gi|153834456|ref|ZP_01987123.1| flagellar hook-associated protein 3 [Vibrio harveyi HY01]
gi|148869152|gb|EDL68184.1| flagellar hook-associated protein 3 [Vibrio harveyi HY01]
Length = 396
Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/434 (10%), Positives = 107/434 (24%), Gaps = 53/434 (12%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T I + H+ S LR + Q++++SG +++ +D+ Q + L
Sbjct: 3 TRISSFHNYQSVQNDLRRQENKVHHNQEQLASGKQLTKPSDDPLATHYIQSIGQQEEQLR 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
DAI L ++++ + ++ A + K + + ++ + +L +
Sbjct: 63 QYLDAIVLVRNRLENQEVVVANAEQFVDESKRISMEMINGAFSPEDRAAK----KRELEE 118
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA F + + G+ + K F RD +G
Sbjct: 119 IANN--FMALANSQDESGNYVFAGTKPKSQPFFRDYDGS--------------------- 155
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ +L
Sbjct: 156 -----------------------VVYTGDDYQRKMKIASNIELGINYPGNHLFTEIPNPF 192
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + T + + V + + P
Sbjct: 193 GDFEPQYDLQEGSELLLGQATDESKSDSNYKVTFVDMSNGKFGYQLEKDGSIVQVDDYSP 252
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
V + + D+ + + + ++ + +
Sbjct: 253 IDGIQYEGVNIQLKGQVSAGDSITLEPRQTFSVFDAFKETMQWSESSVSD---ASATAKL 309
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+M +G+ S + +QE + ++ K D D +
Sbjct: 310 HQMTEEFQAAFVHMNKVRTDVGAKLSTLDIQEQNHEDFNLSLAKAKSNFEDLDYSKAVIE 369
Query: 422 LSALQTQQQLAVQA 435
S Q + QA
Sbjct: 370 FSENSRALQASQQA 383
>gi|169834758|ref|YP_001715845.1| flagellin [Clostridium botulinum A3 str. Loch Maree]
gi|169408865|gb|ACA57275.1| flagellin [Clostridium botulinum A3 str. Loch Maree]
Length = 473
Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/449 (8%), Positives = 110/449 (24%), Gaps = 31/449 (6%)
Query: 11 MSASQKLRDIN--YNLEVVQD-RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M+ + +IN L + ++S+ RV+ AAD+ + + + + + I
Sbjct: 1 MNKLSLINNINYFNKLATINSMKLSTNKRVNVAADSPSEIGRISRINTSVRSRNIAVRNI 60
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSS 127
G S + + + ++ ++ + +K + +S + +S L ++
Sbjct: 61 QEGISLLQVKENAVNDLKEIGTRLKELSLIYKNNTLNEDDKKSIEYEARSLLDNMHFTIK 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
N G + D + +I + + +
Sbjct: 121 NTKFNGKNLFTGEKLNIQGSAYNMDIKLMDFKVSKGDSIFIGDNKSSNESHAIKISDTEI 180
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ + + ++ ++ V + + +
Sbjct: 181 DTILKKYNLEKANKIAFYESEMVDKHNIKTVFTSEYGYKNNADIDIVNVSNNVNKMFSIN 240
Query: 248 IPVPLPA-APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
+ + + ++ + T+ +
Sbjct: 241 GKINDNSRVKGYLQEEDNKLIGNININDKEYNIQLETTMEDALKTNLNSIKTTIINKNDH 300
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
T + D T S++ E + N + ++
Sbjct: 301 TFRGSTSIVDIQDNSGMTYTSKEITVYEFKEIIANDKSNNKNKQIVFELPDDKKFTFDIN 360
Query: 367 FID---------------------------TQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
D + IG ++ + + +F +
Sbjct: 361 NKDVNLYISDEEYNSFDISDILNGSNIIEEKVLNQLNNYQNYIGIKTNELEYKLNFEQNN 420
Query: 400 RDAVEKGVGRLVDADMASESTRLSALQTQ 428
+ + ++ D+A E S +
Sbjct: 421 QILEGTTLDKIQSIDIAKELVEKSKNEIL 449
>gi|146341921|ref|YP_001206969.1| putative flagellin protein, C-terminus [Bradyrhizobium sp. ORS278]
gi|146194727|emb|CAL78752.1| Putative flagellin protein, C-terminus [Bradyrhizobium sp. ORS278]
Length = 516
Score = 78.2 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 70/514 (13%), Positives = 142/514 (27%), Gaps = 63/514 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ + S L+ L Q+ +S+G +V+ A DN + AQ + + +
Sbjct: 3 MSGIVLSASVRQNLLSLQSTAQLLATTQNNLSTGKKVNSALDNPTNFFTAQGLDNRASDI 62
Query: 61 S----------AVSDAIGLGSSKVD-------------------------IAKAGMSKAI 85
S V A G + + + A ++ A
Sbjct: 63 SNLLDGIGNGVQVLQAANTGITSLQKLVDSAKSIANQVLQSSVGYSTKSSVTSAALTGAT 122
Query: 86 --------------DVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD---------- 121
V+ +A S + S L + +
Sbjct: 123 ATSLLGASSTAVTGSVVQNDATTSSAITGSTKLSGTSGSSSNDLATGITSGETLVVNGTT 182
Query: 122 ----IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
SS T + + + + + L T L
Sbjct: 183 FTFVTGTSSSGTTIGIGDTVSNLLSTIQTATGVTGSVSAGAITLTPPAAGLTLSGSTGTL 242
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
T GL + + S + + ++
Sbjct: 243 AKLGLSTVGDGLAGQTLTVGATGGGTATSITFGLGTGQVNSLNDLNTKLAANNLQASIDS 302
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ + + + AA + + N +
Sbjct: 303 SGKITLTTTNDAASATIGTIGGTAAASSQSFNGLTAAAPVADSTAQAQRASLVSQYNNVL 362
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
N + T ++ K ++ L ++ + + +
Sbjct: 363 AQINTTAADASFNGVNLLNGDTLKLTFNENGKSTLSITGVTFNTGGLGLSTLTSGTDFLD 422
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ +++ ++T + A +GS S + +++DF K + + ++ G L AD
Sbjct: 423 NNSANKVIGVLNTASSTLRSEASTLGSNLSVVQIRQDFNKNLINVLQTGSSNLTLADTNE 482
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV ALS+ N S A +L L R
Sbjct: 483 EAANSQALSTRQSIAVSALSLANQSQASVLQLLR 516
>gi|154250317|ref|YP_001411142.1| flagellar hook-associated protein 3 [Fervidobacterium nodosum
Rt17-B1]
gi|154154253|gb|ABS61485.1| flagellar hook-associated protein 3 [Fervidobacterium nodosum
Rt17-B1]
Length = 297
Score = 77.9 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 21/187 (11%), Positives = 61/187 (32%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + ++ Y + + D++SSG V +D+A + A + S L
Sbjct: 3 ITNNMINERSLFNIQQSLYRIARMHDKLSSGKEVQYPSDDAVIATRASNISSRLRELEQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ ++ V + + D+ ++ + G + +I +E+ ++ L
Sbjct: 63 KRNVDHINNFVQSYDTTLQELSDLYHRVRELMVRGANGTNTVDERNAIAAELKAIKEHLI 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+++ + + +++ + K + + +
Sbjct: 123 EVSNTRVGDEFIFGGARSELKPVDENGNIVTPIEANVRRKANVLGYSITYGVTVYDVFTL 182
Query: 181 TDGTERY 187
+G +
Sbjct: 183 NNGKTVF 189
>gi|302391043|ref|YP_003826863.1| flagellar hook-associated protein 3 [Acetohalobium arabaticum DSM
5501]
gi|302203120|gb|ADL11798.1| flagellar hook-associated protein 3 [Acetohalobium arabaticum DSM
5501]
Length = 288
Score = 77.9 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 49/124 (39%), Gaps = 4/124 (3%)
Query: 6 TNHSAMSASQ-KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN ++ L D L+ ++S+G + + N + ++S + +
Sbjct: 4 TNGMMVNNLLGNLSDSKERLDEYNRQLSTGKKFDMPSQNPTGTVRSMDLESTISSNKQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
I + + + +S A D++ + G TD +SI E+ +L++ ++
Sbjct: 64 RNINQSLTWIKSTEGTLSHANDILHRTRELAVKGANGSLNETDRQSIADEVKELKANMKG 123
Query: 122 IARG 125
+A
Sbjct: 124 VANT 127
Score = 51.3 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 34/85 (40%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + +S +D + ++G+ +R+ L ++ ++ + ++ + +
Sbjct: 190 DNLETGNIDGISNNISDLDESLDEVIKKRSEVGAKQNRLELTKNRLEDDKIKFKELLSQN 249
Query: 411 VDADMASESTRLSALQTQQQLAVQA 435
D D+A L + + A+ +
Sbjct: 250 EDVDIAKTIMNLKMSENVHRAALSS 274
>gi|78485805|ref|YP_391730.1| flagellin-like [Thiomicrospira crunogena XCL-2]
gi|78364091|gb|ABB42056.1| Flagellar hook-associated protein FlgL [Thiomicrospira crunogena
XCL-2]
Length = 341
Score = 77.9 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 21/199 (10%), Positives = 67/199 (33%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ +N M + + ++ +Q+++++G RV+ +D+ S + +S
Sbjct: 3 VSSNQFHMQSFSAIEKHQNSVLDIQEKLTTGNRVNRPSDDPIATSQIHSLNKAVNTISQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
S++ + ++ +S A+D+ + + ++ Q+ ++ ++ +
Sbjct: 63 EKNGEFAKSQLSLEESQISTAVDLTQRARELSIQMMNGTYTAEDRQATAQEIGQIIKHLT 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ N G++ + A V+ D+ +
Sbjct: 123 GIMNSNNSEEELLFAGNNVDAAAAFVVDPANSGALQPGNEYYAYIGSANAGAQFDNRANF 182
Query: 184 TERYGLLDRNHKIKVEPQV 202
R+ + ++ P
Sbjct: 183 GSRFVQIGFDNDQTAAPDD 201
Score = 39.0 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 25/248 (10%), Positives = 73/248 (29%)
Query: 190 LDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIP 249
+ + ++ ++ + + ++ + +N + ++
Sbjct: 82 TAVDLTQRARELSIQMMNGTYTAEDRQATAQEIGQIIKHLTGIMNSNNSEEELLFAGNNV 141
Query: 250 VPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
A P + + + + I D T +
Sbjct: 142 DAAAAFVVDPANSGALQPGNEYYAYIGSANAGAQFDNRANFGSRFVQIGFDNDQTAAPDD 201
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
K ++ + + + + +G LN+ + + +
Sbjct: 202 KGDSSRVRITDNGAKVFNIPGGATSLPAGVDPNLLNVLVGLKDSLDQGNPPPDAVADDLL 261
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
+ +K + +IGS +RI Q + + A+++ + + D+ ++L+ Q
Sbjct: 262 SAVKGLSKQQAEIGSRQNRIQTQFEAGQTFSMALQERRVNIEEMDVVEGISQLNMRQNAL 321
Query: 430 QLAVQALS 437
Q+A Q S
Sbjct: 322 QMAQQVFS 329
>gi|229541551|ref|ZP_04430611.1| flagellar hook-associated protein 3 [Bacillus coagulans 36D1]
gi|229325971|gb|EEN91646.1| flagellar hook-associated protein 3 [Bacillus coagulans 36D1]
Length = 297
Score = 77.9 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 3/146 (2%)
Query: 19 DINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAK 78
L Q+++SSG +++ +D+ + + D S+ ++
Sbjct: 18 TSYSKLAKYQEQLSSGKKINKLSDDPLSAMKGISYRRTVAQVKQYEDNFAEASTWIESTN 77
Query: 79 AGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+ +A V+ I+ + TD +SI E+ QL+ QL +IA + +
Sbjct: 78 DALDEANQVLQRIRELTVEGATDTKTPTDRQSIADEVEQLRDQLVNIANTKVNDKYIFNG 137
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKV 161
T S S
Sbjct: 138 TRTTEKPISGDISTFDGSTSLGMNTN 163
Score = 37.8 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 29/94 (30%)
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRI 389
+ + ++ + + + ID I + + G+ S+R+
Sbjct: 178 NANGANAFSDDLFKDLNHLISDLKSGTSASGFDSYLGKIDGHIDNVLSELSQAGARSNRL 237
Query: 390 HLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
L +D + K + D D+ T S
Sbjct: 238 DLMKDRVTQQETTATKIMAGNEDVDIDKAYTDFS 271
>gi|188580456|ref|YP_001923901.1| hypothetical protein Mpop_1194 [Methylobacterium populi BJ001]
gi|179343954|gb|ACB79366.1| conserved hypothetical protein; putative flagellin C-ter domain
[Methylobacterium populi BJ001]
Length = 400
Score = 77.9 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 72/452 (15%), Positives = 141/452 (31%), Gaps = 53/452 (11%)
Query: 1 MTS-ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M+S I + + L+D + Q+R+++GL+VS A DN + AQ + + +
Sbjct: 1 MSSGITLSAATRQNLLSLQDTSALTATTQNRLATGLKVSSALDNPVNFFTAQNLSNRSTD 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQL 119
L + D I G + A G++ + S + Q+ TQ+ +
Sbjct: 61 LGGLLDGISNGIQAIQAANQGIT------------SIQKLIDSAKSTANQALSTQITT-- 106
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
G+ A+ S + + T + +
Sbjct: 107 ---------------TGTAGTDYAAPGSSGASVKLYVNGTATTATIASGDTIDTAITTLN 151
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ G+ + KI + + + + + AT + T
Sbjct: 152 TAAGSTMFSKDTTGKKIVLNASAAVEFATTAGQTALGFAAGSTSAATVAKYGTGNDVVTS 211
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
++ + A + + + S I G++ + +S
Sbjct: 212 GSNLTVSGVDTRKKLAEQYNSLLTQITQLAKDSSFNGTNLISNGDASNKLHIAFNEKDSS 271
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ + G + S + K S S +T +
Sbjct: 272 NLDVQGQDLTSAGLDLDAITGNSGSTVDGKGNFLLDTSITSTLTSLSSAS---------- 321
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
AA+ GS S + ++ F K + + ++ G L +AD+ E+
Sbjct: 322 -------------DTLRAASSTFGSNLSVVQNRQSFSKNLINVLDTGAANLTNADLNLEA 368
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
AL T+Q L + ALS+ N + IL L R
Sbjct: 369 ANSQALSTRQSLGISALSLANQAQQSILQLLR 400
>gi|104782835|ref|YP_609333.1| flagellar hook-associated protein FlgL [Pseudomonas entomophila
L48]
gi|95111822|emb|CAK16546.1| flagellar hook-associated protein FlgL [Pseudomonas entomophila
L48]
Length = 522
Score = 77.9 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/425 (10%), Positives = 103/425 (24%), Gaps = 11/425 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ ++S + N Q++ S G+RV AAD+ + ++ L
Sbjct: 3 ISTSQFYNTSSANYQRGLANTVKSQEQSSDGIRVRTAADDPVGAARLLQLEQQQNMLDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
I + + ++A ++ V+ + D K+ SE+ L+ QL
Sbjct: 63 KGNITNVRNALGTSEATLNSIGAVLQRVNELAVTSGNAGFTDADRKANASELAALEEQLF 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ NG+ G + + + + D ++++ D +
Sbjct: 123 SLMNSKDENGKYLFSGSKGDTQPYVRNTDGSYSYQGDQSQLKLQVGDMLSLAANETGYDA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + S + + S + +
Sbjct: 183 FEQALNTSRSQTKLTSPAVDDGRVSLSNGQVSGSVAYNDRFRSGEPYSVQFTSSTQYKIL 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA---ASATYIRMGNSDIWVRATTKNSI 297
A G P + + + + T
Sbjct: 243 DASGNDVTLEASQGGNFDPKGVNTSVSFRGVDLRLKIDFKPGDEANPDAAIAGHTFSLQS 302
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
D + + T + + P + ++ + N
Sbjct: 303 KPDTITGSRSPGNGSTTQVTGASITNQAQYNASFPGGGAVLKFTSPTDFELYSAPMSANS 362
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRI-----HLQEDFIKLMRDAVEKGVGRLVD 412
+ +S + + Q I + + +D
Sbjct: 363 RPISTGTLSGTTATASGVSFELSGAPAAGDSFGVQVDTHQTQNILQTISQLRTALSVPMD 422
Query: 413 ADMAS 417
D A+
Sbjct: 423 KDPAA 427
Score = 40.1 bits (91), Expect = 0.69, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 27/75 (36%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ + + ++ IG + +Q + + + K + + D A+ RL
Sbjct: 437 SAIGNVASATNQVASSISSIGGRGQALDIQAETNEALSTENTKTQSSIREVDPATVMLRL 496
Query: 423 SALQTQQQLAVQALS 437
Q ++Q+ +
Sbjct: 497 QMQTNMLQASMQSFA 511
>gi|4760495|dbj|BAA77308.1| flagellin [Pseudomonas putida]
Length = 120
Score = 77.9 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 3/107 (2%)
Query: 44 AAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT 103
AA I+ + LS G S A+ M ++ ++ ++
Sbjct: 1 AAGLQISNRLTRQIKGLSVAVKNANDGISIAQTAEGAMQESTSILQRMRELALQSANGSN 60
Query: 104 ---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
D S+Q E T L +L IA ++F G N L GS+ +
Sbjct: 61 SEDDRTSLQQEFTALSGELNRIASTTTFGGRNLLDGSFGSTAFQVGA 107
>gi|30248329|ref|NP_840399.1| flagellar hook-associated protein FlgL [Nitrosomonas europaea ATCC
19718]
gi|30138215|emb|CAD84223.1| Flagellin, N-terminus [Nitrosomonas europaea ATCC 19718]
Length = 299
Score = 77.9 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 15/144 (10%), Positives = 48/144 (33%), Gaps = 3/144 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T+ ++ + +L +Q +S+G R+ +D+ + A + +
Sbjct: 3 VSTSTLYDQGTRSMLQQQDSLFRLQQHLSTGKRIMTPSDDPIGAARAHELAQSLSLNTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ---SQLR 120
+D + + + + +++ +++ A + +L+ +L
Sbjct: 63 ADNRYRAADSLQQVDSTLGSVSNLIQSVRTMAVAVGNSAFSDSERKMMAVELRGHFDELL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTAS 144
+A G G++
Sbjct: 123 GLANTKDEQGNYLFSGFKGNTRPF 146
Score = 55.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 27/74 (36%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A+ + +D + A +GS + + + ++ + RL D D A
Sbjct: 211 AVSTALQDLDIALDNVLAKRAAVGSRLQEVDALQQIGEDTAIQYQQSLSRLQDLDFAQAI 270
Query: 420 TRLSALQTQQQLAV 433
+ ++ Q + A
Sbjct: 271 SDMTRQQALLEAAQ 284
>gi|157375523|ref|YP_001474123.1| flagellin-like protein [Shewanella sediminis HAW-EB3]
gi|157317897|gb|ABV36995.1| flagellin-like protein [Shewanella sediminis HAW-EB3]
Length = 228
Score = 77.9 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 44/114 (38%)
Query: 31 VSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMST 90
+SSGL+++ A+D+ A IA + S A + S + +S D +
Sbjct: 28 LSSGLKINRASDDPAGLQIANRLTSSINASDQRATNARDQQSIYNTQAGQLSSITDSLQR 87
Query: 91 IKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
DS +IQ+E+ QL ++ IA + D +AS
Sbjct: 88 ANELSIQAGNPLNDSGAIQAELDQLTEEINVIAESALGQANFISGLDASDPSAS 141
Score = 50.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 31/85 (36%)
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
AN + + + + A IG+ S+ + + + ++ +
Sbjct: 126 QANFISGLDASDPSASQTIVSDASATIDQTASDIGAQSNGLDSRINNYQVSSINTSEARS 185
Query: 409 RLVDADMASESTRLSALQTQQQLAV 433
R+ D D A S+ + Q ++AV
Sbjct: 186 RIQDTDYAETSSEQIKAELQLKIAV 210
>gi|111115004|ref|YP_709622.1| flagellar hook-associated protein FlgL [Borrelia afzelii PKo]
gi|216263850|ref|ZP_03435844.1| flagellar hook-associated protein 3 [Borrelia afzelii ACA-1]
gi|110890278|gb|ABH01446.1| flagellar hook-associated protein 3 [Borrelia afzelii PKo]
gi|215979894|gb|EEC20716.1| flagellar hook-associated protein 3 [Borrelia afzelii ACA-1]
Length = 424
Score = 77.9 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/404 (9%), Positives = 101/404 (25%), Gaps = 29/404 (7%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G R+ ++ + + +D L+ + I S + A+ + ++++ K
Sbjct: 36 GKRIVKLRNDPTGVTHTIRLDNDIFKLNVYTKNIDTSKSNLRYAEGYLQSLTNILTRAKE 95
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
G ++ + ++ + L D A +
Sbjct: 96 IAIQGASGTYEADDKKMISKEVNALLEDTV-------------------AIANAKGPNGY 136
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
K+ + + + +G + + ++ + + +V ++ +S
Sbjct: 137 SIFSGTKIDSEAFKVTRENKVSKISKEGEGPQIIKVEYNGNQAEKKTEVYNEVYISNNYP 196
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
I + + +S + A S
Sbjct: 197 GNKIFFSQNQNIISSINTNGFTVKENTKIYIDNIEIGLTTGDTALDIVAKINESSAPVEA 256
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ + T L
Sbjct: 257 SIDPVLNSLSIKTTTPHQIWITEAEESNVLQTL--------GILTKNNDTKLPPYNLASN 308
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
S+ I E+L ++ ID +K + +G+ +R+
Sbjct: 309 TEVRSRSIFDALIELRDALYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSY 368
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ--LAVQA 435
+ I +++ + + D D+ T L+ Q L + A
Sbjct: 369 ERISKETADMKEDMVQYTDLDVTKAITNLNMASLAYQVSLGISA 412
>gi|311031935|ref|ZP_07710025.1| flagellin domain-containing protein [Bacillus sp. m3-13]
Length = 70
Score = 77.9 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A++ ++L +++SSGLR++ A D+AA +I++ M++ L
Sbjct: 3 INHNIAALNTHRQLGSATNAQMKSMEKLSSGLRINKAGDDAAGLAISEKMRAQVRGLDQA 62
Query: 64 SDAIGLGS 71
S G
Sbjct: 63 SRNAQDGK 70
>gi|158424323|ref|YP_001525615.1| flagellin [Azorhizobium caulinodans ORS 571]
gi|158331212|dbj|BAF88697.1| flagellin [Azorhizobium caulinodans ORS 571]
Length = 353
Score = 77.9 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 64/205 (31%), Positives = 96/205 (46%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI+TN++A A LR IN +L DRVS+G +++ AAD AAYW+I+ + SDNGAL
Sbjct: 1 MTSIITNNAASVALATLRSINDSLNTTNDRVSTGKKINSAADGAAYWNISTTLTSDNGAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV DAI L S V G+++ ++ ++TIK + + D S+Q I S +
Sbjct: 61 GAVKDAINLDMSSVKTTNTGLTQIMNSLNTIKQALVSAQSSTADRTSLQKNIANAVSDIS 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A + NG NWL D ++ + KS++ +F R TT ++
Sbjct: 121 SAASSAVVNGANWLSVDSSATGFNANKSLLANFSRASGVVTVGTTTLDTGAFAVYDAKTN 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKD 205
T +D
Sbjct: 181 GTATGTSSTIDTAVTAVATSASSGT 205
Score = 64.4 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/87 (44%), Positives = 57/87 (65%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ + I A + +G+ +R+ Q++F + + D +G LVDA+M EST+L A
Sbjct: 267 MKIVSATIDGLQAGSTALGTTQTRLTSQQNFAQSLIDINTSSIGSLVDANMEEESTKLKA 326
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
LQTQQQLAVQ+LSI NNST+ I++LFR
Sbjct: 327 LQTQQQLAVQSLSIANNSTSNIMTLFR 353
>gi|146341773|ref|YP_001206821.1| putative flagellin [Bradyrhizobium sp. ORS278]
gi|146194579|emb|CAL78604.1| putative flagellin [Bradyrhizobium sp. ORS278]
Length = 275
Score = 77.9 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 4/148 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +I TN +A SA + L + ++SSG R++ A+D+AA +I+ + SD L
Sbjct: 1 MPAISTNVAANSAVRYLNINSSQETSSLSKLSSGSRITSASDDAAGLAISTRISSDITTL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA----GVERGTDSKSIQSEITQLQ 116
+ +S + A G S D+++ +K+ + + IQSE +QL
Sbjct: 61 QQAATNASQATSILQTADGGASNISDILARMKSLASESASGTTVDSSSRSYIQSEFSQLI 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTAS 144
S++ IA G+ ++G + L ST
Sbjct: 121 SEIDSIASGTRYSGTSLLDGTSSFSTGV 148
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 49/136 (36%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ ++ + +T + + ++ +DT I
Sbjct: 139 DGTSSFSTGVNVLVGSNSTDVIQIKLSSLTSTALGVSTLDVSTQTGASTALTTLDTAISN 198
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+AA IG+ SR + D I ++ + D D+ASE +LS+ Q + Q AV
Sbjct: 199 VSAARADIGAQESRFNFSADSISTQTQNLQSANSAIKDVDIASEQAKLSSAQVKTQAAVS 258
Query: 435 ALSIVNNSTARILSLF 450
A + N +L L
Sbjct: 259 AEAAANQIPQYLLKLL 274
>gi|332140577|ref|YP_004426315.1| hag; flagellin [Alteromonas macleodii str. 'Deep ecotype']
gi|327550599|gb|AEA97317.1| hag; flagellin [Alteromonas macleodii str. 'Deep ecotype']
Length = 265
Score = 77.5 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 83/243 (34%), Gaps = 3/243 (1%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDI 76
L I E + ++++SG +V++A D A+ I + + S+ + G S
Sbjct: 12 LGQIQEKQESLFEKLASGKKVNNAIDGASAQQIIERLTSEVEGKRQAITNVFDGISFTQT 71
Query: 77 AKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
A++G+S + I+ D +IQSEITQLQ + ++F G
Sbjct: 72 AESGLSNINSDVERIRELTVQSGNGILSAADRDAIQSEITQLQKNISQTIEQTNFAGRPL 131
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
L D S + + + N +I I ++ + ++ +
Sbjct: 132 LSEDDSISFQAGVGANQSISVDTQNVASEIDGILNINITSGTSVNDALSAADQALEFIGS 191
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
+ ++ + V+ G I + + + +A + +
Sbjct: 192 ARSELGATQNRFESVARVLTQGDIDAAESRGRIQDLDFAQATSQSVINNIRSQAALTVQA 251
Query: 254 AAP 256
A
Sbjct: 252 QAN 254
Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 37/99 (37%)
Query: 352 TDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
++ + +S D ++ +A ++G+ +R + + GR+
Sbjct: 166 NINITSGTSVNDALSAADQALEFIGSARSELGATQNRFESVARVLTQGDIDAAESRGRIQ 225
Query: 412 DADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D D A +++ + Q A+ + N + L+L
Sbjct: 226 DLDFAQATSQSVINNIRSQAALTVQAQANIQEGQALALL 264
>gi|4760493|dbj|BAA77307.1| flagellin [Pseudomonas putida]
Length = 483
Score = 77.5 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/325 (12%), Positives = 77/325 (23%), Gaps = 5/325 (1%)
Query: 44 AAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VE 100
AA I+ + S L G S A+ M + +++ ++
Sbjct: 1 AAGLQISNRLTSQIKGLGVAVKNANDGISIAQTAEGAMQASTNILQRMRELALQSANGSN 60
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGS--FIRDDN 158
D S+Q E T L +L I+ ++F G L +++ + + + F D
Sbjct: 61 SDDDRSSMQQEFTALTGELNRISGTTTFGGRKLLDGSFSNTSFQVGANANETISFGMGDI 120
Query: 159 GKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+ + L L + D +
Sbjct: 121 SATGLKGTFSSASETSTSLAGFNASVTGTELKNGATTQTGAVVASLDATGTSTLTGNEKL 180
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
T T A A A V A T ++ A
Sbjct: 181 TINGTTITGIAAGDDGAAVQAAINAQTAVTGVTAAWDDTADQMTLTSTDRAVSVGGADVG 240
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
+ +T + + + VD+ T + + ++
Sbjct: 241 SFGLSAGTTSTVSTGTSIASKAGDMKVNGSTVSWIQGATVDSVLTQIAAASNVASATIDN 300
Query: 339 YSMVTLNITRHANTDAYNEKLAMEE 363
+T +
Sbjct: 301 KGRITATTQDGNELKIVDTVGGSAA 325
Score = 58.2 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 22/59 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
++ + +D I+ + +G++ +R ++ + + R+ DA
Sbjct: 425 IGTAADSQKAIQALDAAIQQIDSQRSALGAVQNRFDSTVSNLQSISENSTAARSRIQDA 483
>gi|253575864|ref|ZP_04853198.1| flagellar hook-associated protein 3 [Paenibacillus sp. oral taxon
786 str. D14]
gi|251844658|gb|EES72672.1| flagellar hook-associated protein 3 [Paenibacillus sp. oral taxon
786 str. D14]
Length = 296
Score = 77.5 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 4/135 (2%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ LR+IN +L Q ++++G ++S +D+ +D G+
Sbjct: 13 LKNLRNINSSLTTGQQQLATGQKISKPSDDPIGVGYQMRYDTDLARSEEFLLNAQTGTEI 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ + +A DV+ + G ++I SEI QL Q+ I S+FNG
Sbjct: 73 LKTMDSLFQQASDVLKRARTLALQGANGTLDNQQRRTIASEIRQLYEQMVTI-GNSTFNG 131
Query: 131 ENWLRTDLGSSTASI 145
Sbjct: 132 RYLFNGQKTDQAPYT 146
Score = 49.7 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 35/79 (44%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
++ +++ V+ ID + + ++G+ +R L + I+ + ++ + + D D
Sbjct: 203 DDVDGIQDSVNRIDASVDRLNVSWAEVGARMNRFDLMINRIQDDQVSLREQRSNVADVDF 262
Query: 416 ASESTRLSALQTQQQLAVQ 434
A T L + Q A+
Sbjct: 263 AEAITDLKMKENVLQAALS 281
>gi|4760499|dbj|BAA77310.1| flagellin [Pseudomonas putida]
Length = 150
Score = 77.5 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 45/139 (32%), Gaps = 3/139 (2%)
Query: 44 AAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VE 100
AA IA + S L+ G S A+ M + D++ ++
Sbjct: 1 AAGLQIANRLTSQVKGLTVAVKNANDGISIAQTAEGAMQASTDILQRMRELALQSANGSN 60
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
D S+Q E T L +L IA ++F G N L S++ + + +
Sbjct: 61 SDEDRSSLQQEFTALSGELTRIANTTTFGGRNLLDGTFTSTSFQVGANANETISFGMRSI 120
Query: 161 VQITTIDYYLDPETVLLDS 179
Y + S
Sbjct: 121 SASDLKGNYTEAPVSGAAS 139
>gi|148269977|ref|YP_001244437.1| flagellar hook-associated protein 3 [Thermotoga petrophila RKU-1]
gi|147735521|gb|ABQ46861.1| flagellar hook-associated protein 3 [Thermotoga petrophila RKU-1]
Length = 304
Score = 77.5 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 50/136 (36%), Gaps = 4/136 (2%)
Query: 6 TN-HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN + ++ + + D++SSG +V +D+A A + + L
Sbjct: 4 TNKMISDRVLFNIQTSLKRIAKLHDQLSSGYKVRYPSDDAVVAKRASDILTRKRELEQFQ 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
++ + V+ + + + ++ + + ++I EI +++ L +
Sbjct: 64 RSVDHVQTYVNAYDSALQTVSSITQRLRELLVRAANGTLSKAEREAIAEEIDKIKENLVE 123
Query: 122 IARGSSFNGENWLRTD 137
+A N + D
Sbjct: 124 VANTRIGNEYIFSGYD 139
>gi|94987190|ref|YP_595123.1| flagellin-like protein [Lawsonia intracellularis PHE/MN1-00]
gi|94731439|emb|CAJ54802.1| Flagellin and related hook-associated proteins [Lawsonia
intracellularis PHE/MN1-00]
Length = 525
Score = 77.5 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/355 (10%), Positives = 86/355 (24%), Gaps = 6/355 (1%)
Query: 17 LRDINYNLEVVQD---RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ +N +L + + + R++ +D+ A + + G +
Sbjct: 13 ISQMNKSLSDYMETNIQGGTMKRINRPSDDPAGTARILSYRGSIGGIEQFKTNTDTAMGW 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ +A +++ V++ IK ++I ++ QL L +++
Sbjct: 73 LSLADETLNQVSTVVTKIKELAEQAATDTYTPDQREAIGFQLRQLMGTLINLSNNQFEGK 132
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+ D S+ +V + T T
Sbjct: 133 HIFSGQDYNKSSFLEGLTVTSGDPNVNPNPPMQVTGTLEKTGLIRFEKDETIPPAADLNY 192
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
+ Q G ATT+ D + +
Sbjct: 193 QWSTDGGKTWQTATIPAGGREITIGGAVVTVPAPATTNVTAFDPDKPLGDTNGSLLYVRP 252
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
+ N+ + + T SD V S PG + + +
Sbjct: 253 TAIYQGSDNNSKPIVDRYGTVPMPPLNTNTVGTFSDNVVVKFPNGVDLSTPGSFDFSYST 312
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
G + + ++I T N +++
Sbjct: 313 DGGKTWTAGNSEVIVSPGPPSTSTARLILPGGYMDIGSADTTSPNNTIPPDGQLI 367
Score = 51.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/108 (12%), Positives = 38/108 (35%), Gaps = 3/108 (2%)
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
+ + + N + + + ++ K A +IG +R+ + ++
Sbjct: 413 QNDGRNLFETVGNLIAYTETNNQEGIANALKDLELAQKNILTQAARIGGKENRLEITKEA 472
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL---AVQALSIVN 440
+ + + + + DAD+ +RL+ Q + + +N
Sbjct: 473 LDTNKYDQTQRLSGVEDADLTELVSRLAQQQMAYSTILKSSSMIMQLN 520
>gi|16588460|gb|AAL26808.1| flagellin [Treponema sp. 'ovine foot rot']
Length = 229
Score = 77.5 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 58/161 (36%), Gaps = 3/161 (1%)
Query: 43 NAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE-- 100
+A+ ++++ M+S L+ S G + + +A+A + + D+M I+
Sbjct: 1 DASGLAVSEKMRSQIRGLNQASANASNGINFIQVAEAYLQETTDIMQRIRELAVQASNGI 60
Query: 101 -RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
D IQ E++QL +++ IA + FNG N L T + F N
Sbjct: 61 YSAEDRMQIQVEVSQLVAEVDRIASSAQFNGMNMLTGRFARETGENVVTASMWFHIGANM 120
Query: 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
++ + V + + + +
Sbjct: 121 DQRMRVYIGTMSAAAVGIREIGSEKIMTIETADSANMSIGT 161
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 29/83 (34%)
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
+ + ID +K +G+ +R+ L I + + ++ R+ D
Sbjct: 147 MTIETADSANMSIGTIDEGLKKINKQRADLGAYQNRMELTVVGINIAAENLQAAESRIRD 206
Query: 413 ADMASESTRLSALQTQQQLAVQA 435
ADMA + + Q +
Sbjct: 207 ADMAKQMVEYTKNQILSNTGIAM 229
>gi|78221660|ref|YP_383407.1| flagellin-like [Geobacter metallireducens GS-15]
gi|78192915|gb|ABB30682.1| Flagellin-like protein [Geobacter metallireducens GS-15]
Length = 294
Score = 77.5 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/257 (13%), Positives = 76/257 (29%), Gaps = 4/257 (1%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N +A + L+ I E +Q + S+G +VS A+D+ MKS A +
Sbjct: 6 NTTANLVTNNLQTIRKRTEDLQQQASTGYKVSTASDDPVTAQQILHMKSLMTAGDQYARN 65
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIA 123
I G + + +++ MS+ +V++ K A + +E +L++Q+ +
Sbjct: 66 ISNGIAWLTMSEGAMSELGNVITRAKELAVAMSSETNNANSRAAAVNEFKELKAQIITLG 125
Query: 124 RGS-SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ + + + Y + +
Sbjct: 126 NTQLNGRYIFGGFKNDTPPFDASGNFNGTDDAIMVEVDRGSSVQMNYSGGQLIRGTGGGT 185
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
N ++ ++ +A G + + L + A N D
Sbjct: 186 DIISSLDNIINALGADNTSGVQAELSTLDNALGQVLATRTDLGARMSHFNAANNIVNDMK 245
Query: 243 KGIATIPVPLPAAPAAP 259
+ I
Sbjct: 246 LSLTKITSDKQDIDLMQ 262
Score = 40.5 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 29/73 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ +S +D + A +G+ S + + + M+ ++ K D D
Sbjct: 200 ADNTSGVQAELSTLDNALGQVLATRTDLGARMSHFNAANNIVNDMKLSLTKITSDKQDID 259
Query: 415 MASESTRLSALQT 427
+ + LS QT
Sbjct: 260 LMQVISDLSKQQT 272
>gi|37654968|gb|AAQ96739.1| flagellin [Burkholderia cenocepacia]
Length = 228
Score = 77.5 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 42/140 (30%)
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
T T + + NT + + + ++
Sbjct: 89 QTTFNSQTILGGTGSVTFQIGAAANQVVTVDFGTANWNSTGMSVNTLSVATQSGAQSAIT 148
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
ID +K +G+ + + + ++ DAD A+E+ LS Q
Sbjct: 149 AIDAALKQVNTFQATLGAAQNTFQAAISTTQTQATNMTAARSQITDADFATETANLSKAQ 208
Query: 427 TQQQLAVQALSIVNNSTARI 446
QQ + L+ N+ ++
Sbjct: 209 VLQQAGISVLAQANSLPQQV 228
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 63/191 (32%), Gaps = 3/191 (1%)
Query: 40 AADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV 99
AAD+AA +I+ + AL+ G S + A + +D + I+
Sbjct: 1 AADDAAGLAISTSQTAAINALTQGVANANNGISMIQTANGALQSTVDNLQRIRTLAQQAG 60
Query: 100 E---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRD 156
+ + ++Q+E++ ++ +A ++FN + L + A + +
Sbjct: 61 DGSLDSSARANLQAEVSTRLGEIDRVASQTTFNSQTILGGTGSVTFQIGAAANQVVTVDF 120
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
T + + + T L + + + ++ + + T
Sbjct: 121 GTANWNSTGMSVNTLSVATQSGAQSAITAIDAALKQVNTFQATLGAAQNTFQAAISTTQT 180
Query: 217 ISTKKFKLATT 227
+T +
Sbjct: 181 QATNMTAARSQ 191
>gi|269792280|ref|YP_003317184.1| flagellin domain-containing protein [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269099915|gb|ACZ18902.1| flagellin domain protein [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 1008
Score = 77.5 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 18/148 (12%), Positives = 47/148 (31%), Gaps = 4/148 (2%)
Query: 1 MTSILTNHSAMSASQK-LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M +TN ++ + +Q ++++ + S +DN + + M +
Sbjct: 1 MLQRVTNSMMHGMLLSDMQSNLAKMLEIQKQLATQKKFSRPSDNPIDVTRSLSMDTTITE 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQ 116
+ + ++ + + V ++ + G D +I ++ QLQ
Sbjct: 61 NVQYRRNLDDALTWLNNTETAFDQITSVYQQVRQLAVYAGDGGLVDVDMGAIAEQLYQLQ 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTAS 144
++R+ A G
Sbjct: 121 EEMRNAANYEVEGRFLLSGLSTGVRPFV 148
Score = 59.0 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 26/65 (40%)
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ G++ +R + +K + + ++ D D+A +T+ Q Q +
Sbjct: 932 DNLLRCRTECGALINRYENTQARLKQNNVNLTELQSKISDVDLAEAATQFQMAQAVYQAS 991
Query: 433 VQALS 437
+ ++
Sbjct: 992 LAVIA 996
>gi|113911611|gb|ABI48288.1| Fla4 flagellin [Lachnospiraceae bacterium A4]
Length = 95
Score = 77.5 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 31/77 (40%)
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+A +G++ +R+ + + + + ++ D DMA+ + S Q
Sbjct: 18 KISAQRSLLGAVQNRLDHTINNLDNVVENTTAAESQIRDTDMATGMVKYSNNNVLAQAGQ 77
Query: 434 QALSIVNNSTARILSLF 450
L+ N + +LSL
Sbjct: 78 SMLAQSNQANQGVLSLL 94
>gi|281412142|ref|YP_003346221.1| flagellar hook-associated protein 3 [Thermotoga naphthophila
RKU-10]
gi|281373245|gb|ADA66807.1| flagellar hook-associated protein 3 [Thermotoga naphthophila
RKU-10]
Length = 304
Score = 77.1 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 50/136 (36%), Gaps = 4/136 (2%)
Query: 6 TN-HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN + ++ + + D++SSG +V +D+A A + + L
Sbjct: 4 TNKMISDRVLFNIQTSLKRIAKLHDQLSSGYKVRYPSDDAVVAKRASDILTRKRELEQFQ 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
++ + V+ + + + ++ + + ++I EI +++ L +
Sbjct: 64 RSVDHVQTYVNAYDSALQTVSSITQRLRELLVRAANGTLSKAEREAIAEEIDKIKENLVE 123
Query: 122 IARGSSFNGENWLRTD 137
+A N + D
Sbjct: 124 VANTRIGNEYIFSGYD 139
>gi|170288662|ref|YP_001738900.1| flagellar hook-associated protein 3 [Thermotoga sp. RQ2]
gi|170176165|gb|ACB09217.1| flagellar hook-associated protein 3 [Thermotoga sp. RQ2]
Length = 304
Score = 77.1 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 50/136 (36%), Gaps = 4/136 (2%)
Query: 6 TN-HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN + ++ + + D++SSG +V +D+A A + + L
Sbjct: 4 TNKMISDRVLFNIQTSLKRIAKLHDQLSSGYKVRYPSDDAVVAKRASDILTRKRELEQFQ 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
++ + V+ + + + ++ + + ++I EI +++ L +
Sbjct: 64 RSVDHVQTYVNAYDSALQTVSSITQRLRELLVRAANGTLSKAEREAIAEEIDKIKENLVE 123
Query: 122 IARGSSFNGENWLRTD 137
+A N + D
Sbjct: 124 VANTRIGNEYIFSGYD 139
>gi|37654970|gb|AAQ96740.1| flagellin [Burkholderia cepacia]
Length = 228
Score = 77.1 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 40/109 (36%)
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
+ + NT + + + ++ ID +K +G+ + +
Sbjct: 120 FGTANWNSTGMSVNTLSVATQSGAQSAITAIDAALKQVNTFQATLGAAQNTFQAAISTTQ 179
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+ ++ DAD A+E+ LS Q QQ + L+ N+ ++
Sbjct: 180 TQATNMTAARSQITDADFATETANLSKAQVLQQAGISVLAQANSLPQQV 228
Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 63/191 (32%), Gaps = 3/191 (1%)
Query: 40 AADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV 99
AAD+AA +I+ + AL+ G S + A + +D + I+
Sbjct: 1 AADDAAGLAISTSQTAAINALTQGVANANNGISMIQTANGALQSTVDNLQRIRTLAQQAG 60
Query: 100 E---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRD 156
+ + ++Q+E++ ++ +A ++FN + L + A + +
Sbjct: 61 DGSLDSSARANLQAEVSTRLGEIDRVASQTTFNSQTILGGAGSVTFQIGAAANQVVTVDF 120
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
T + + + T L + + + ++ + + T
Sbjct: 121 GTANWNSTGMSVNTLSVATQSGAQSAITAIDAALKQVNTFQATLGAAQNTFQAAISTTQT 180
Query: 217 ISTKKFKLATT 227
+T +
Sbjct: 181 QATNMTAARSQ 191
>gi|254503982|ref|ZP_05116133.1| Bacterial flagellin N-terminus domain protein [Labrenzia alexandrii
DFL-11]
gi|222440053|gb|EEE46732.1| Bacterial flagellin N-terminus domain protein [Labrenzia alexandrii
DFL-11]
Length = 489
Score = 77.1 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 68/490 (13%), Positives = 145/490 (29%), Gaps = 64/490 (13%)
Query: 24 LEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSK 83
+ VQ+++++G +V+ A DN + A + + L + D +G + A G++
Sbjct: 1 MSGVQNKLATGKKVNSALDNPNSFFTASGLNARASDLGTLLDDMGQSVQTIKAADKGITT 60
Query: 84 AIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSS 141
+++ + K K + + K ++ L SQ+ +A+ SS+ G+N L G+
Sbjct: 61 ITELVKSAKAKANQALQTQSQYERKQFAAQYNDLLSQIEAVAKDSSYKGKNLLAG-AGND 119
Query: 142 TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
+I S + + T++ L+ ++ +
Sbjct: 120 LTTIFNEDSTSKLTMEAVDFTETSLSNGLNLSDLVEGQGGATAFNLTGSKTTITLTGTDG 179
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
L ++ + + S + A L N
Sbjct: 180 ALNSSSKLAEASAIASLSTSLEFVDRSESTPSAQLIGGAPTVNGGQTVQELVNTLNDLNG 239
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
K+ + + + + +T +I + S +
Sbjct: 240 VRAEFDDKTGELTIYSNEDMLISEVGVGGLSTPVTIGTAASVNASHFNTTSAKLVDSASF 299
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ + G V + T + N+ ++ + ++ +
Sbjct: 300 AVGDTLSLTDGNNYELGSLEVDADTTVDDLVNFVNDFQGVDASFNNSTGRLSILSETDLT 359
Query: 382 IGSIS--------SRIHLQEDFIKLMRDAVEKG-------VGRLVD-------------- 412
+GS + + ++ A+E + R+VD
Sbjct: 360 LGSNRGGGTNTDFNATDFGANNTGVVLSALEDSSFATDNDINRVVDRLNNALSTLRFQAS 419
Query: 413 --------------------------------ADMASESTRLSALQTQQQLAVQALSIVN 440
AD E L ALQT+QQLA +LS +
Sbjct: 420 EFGTNLSTIQHRQDYTTAMINTLQEGAGELTLADTNMEGANLLALQTRQQLASTSLSFAS 479
Query: 441 NSTARILSLF 450
+ +LSLF
Sbjct: 480 QADQTVLSLF 489
>gi|209550137|ref|YP_002282054.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209535893|gb|ACI55828.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 332
Score = 77.1 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 65/287 (22%), Positives = 113/287 (39%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI S +A LRDIN N+ V Q+ +++G+RV+ AADN YWS+A ++DN A+SA
Sbjct: 2 SIYQRVSVDAALHVLRDINRNMTVTQNHITTGMRVAKAADNGVYWSVATTARTDNKAVSA 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
+ DA+G+ ++ + A G+ IDV+S IK K+ A E G D + EI QLQ QLR +
Sbjct: 62 IQDALGMAAATMGTAYTGVENVIDVVSEIKAKLVAATEDGIDKNKVNEEIKQLQEQLRSV 121
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ ++FN +NW+ + ++ + D + + S
Sbjct: 122 SESATFNSDNWVILNNDATPTQPRQIPASFIRNADGTVSVGMLSYHIDNTPVGATSSKDA 181
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + V ++ + +K L A
Sbjct: 182 RYLIDDRATGSGEYGVLTSAYFATELGASQNYVLMESKNGTTTGQVVISLSDATTKGQIG 241
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
+ I+ + L + + ++ + I
Sbjct: 242 EMISVVDAALTQLTTVGSAFGALEKRINLQNDFASKLHDNNTAGIGR 288
Score = 66.3 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/312 (17%), Positives = 99/312 (31%), Gaps = 1/312 (0%)
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ ++ ++ I + +R T S
Sbjct: 20 NRNMTVTQNHITTGMRVAKAADNGVYWSVATTARTDNKAVSAIQDALGMAAATMGTAYTG 79
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+ + D+ + + + + ++
Sbjct: 80 VENVIDVVSEIKAKLVAATEDGIDKNKVNEEIKQLQEQLRSVSESATFNSDNWVILNNDA 139
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
T + + + + +G + T + +S G+ Y V
Sbjct: 140 TPTQ-PRQIPASFIRNADGTVSVGMLSYHIDNTPVGATSSKDARYLIDDRATGSGEYGVL 198
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
T + + T + K + EM+S +D + T
Sbjct: 199 TSAYFATELGASQNYVLMESKNGTTTGQVVISLSDATTKGQIGEMISVVDAALTQLTTVG 258
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
G++ RI+LQ DF + D G+GRLVDADM ES++L ALQTQQQL +Q+L+I
Sbjct: 259 SAFGALEKRINLQNDFASKLHDNNTAGIGRLVDADMEEESSKLKALQTQQQLGLQSLNIA 318
Query: 440 NNSTARILSLFR 451
N + + LF+
Sbjct: 319 NATYDTVRQLFQ 330
>gi|197335705|ref|YP_002156693.1| flagellar hook-associated protein 3 [Vibrio fischeri MJ11]
gi|197317195|gb|ACH66642.1| flagellar hook-associated protein 3 [Vibrio fischeri MJ11]
Length = 397
Score = 77.1 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 46/430 (10%), Positives = 113/430 (26%), Gaps = 54/430 (12%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N+ A+ + + +++SG ++ A D+ AQ + L +D
Sbjct: 9 HNYQAV--QNDISRQEAKVHHTSAQLASGKKLLTAGDDPVAALYAQNLTQKKEELRQYTD 66
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
I L ++++ + ++ A K + + + + L+
Sbjct: 67 TITLARNRLERHEVAIANAEQFADDAKRSVMEMINGSLAPEDRYAHAQDLK------GIA 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S+F + + G+ S K F + ++G V +Y +
Sbjct: 121 SNFLNLTNMLDESGNYLFSGTKPKTQPFFKSNDGTVAYAGDEYQRKLKVSGSIEVA---- 176
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
++ KL T + + +G
Sbjct: 177 -------------------------------VNDAGSKLFTEIKNPFGDYDPQYALQEGS 205
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
+ T S S S + + + G+ + I +
Sbjct: 206 ELLLSQATNTNYTDPATYEVSFSASANGQYNYQLSKDGSVVKNAQFDPSEGIKYEGVDIQ 265
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
++ + T + + + ++++
Sbjct: 266 IRGQLKSGDVITLEPKKTISIFDSFKKASELALNDVA-----------DASTTAELQQVT 314
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ A ++G+ + + QE + + K + + D D A +
Sbjct: 315 DEFHAAFIHLSQARAEVGTRQNTLDQQEQQHQDFDLTLSKSLSSIEDLDYAQAVIEFNEN 374
Query: 426 QTQQQLAVQA 435
Q + QA
Sbjct: 375 TRALQASQQA 384
>gi|88799132|ref|ZP_01114712.1| Flagellin and related hook-associated protein [Reinekea sp. MED297]
gi|88778115|gb|EAR09310.1| Flagellin and related hook-associated protein [Reinekea sp. MED297]
Length = 270
Score = 77.1 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 23/175 (13%), Positives = 57/175 (32%)
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
A + D + T I G + + D T
Sbjct: 93 QAANATYTDDDRALIQTEVEGIQEQIRTALEGAEFNGRSLFQNDEPQTFQVGPDAGDTLE 152
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
+ + N + + + + D + + A+ ++G++ ++I + +
Sbjct: 153 VDLGRVTQQVLDAGLNELNVESQASASQSLQAADQILGTFSEASAQVGALQNQIESRVES 212
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + R+ DAD+A E + L+ Q ++++ + + N +L L
Sbjct: 213 LTESSINNAESESRIRDADLAREISDLTQNQIREEIGLAVQAQANERPRDVLQLI 267
Score = 67.5 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 7/140 (5%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I T+ + + + +R+SSG RV+ AAD+AA +IA+ +
Sbjct: 1 MVGINTS----TVQPAVTRSTEQVNQSFERISSGQRVNQAADDAAGIAIAEGFSAQRAGE 56
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
G G S +A + +D + I+ D IQ+E+ +Q
Sbjct: 57 LQAIRNAGDGISLTQVASGTIDSLVDGVQRIRELSVQAANATYTDDDRALIQTEVEGIQE 116
Query: 118 QLRDIARGSSFNGENWLRTD 137
Q+R G+ FNG + + D
Sbjct: 117 QIRTALEGAEFNGRSLFQND 136
>gi|15642857|ref|NP_227898.1| flagellar hook-associated protein 3 [Thermotoga maritima MSB8]
gi|4980571|gb|AAD35176.1|AE001695_2 flagellar hook-associated protein 3 [Thermotoga maritima MSB8]
Length = 304
Score = 77.1 bits (187), Expect = 6e-12, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 50/136 (36%), Gaps = 4/136 (2%)
Query: 6 TN-HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN + ++ + + D++SSG +V +D+A A + + L
Sbjct: 4 TNKMISDRVLFNIQTSLKRIAKLHDQLSSGYKVRYPSDDAVVAKRASDILTRKRELEQFQ 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
++ + V+ + + + ++ + + ++I EI +++ L +
Sbjct: 64 RSVDHVQTYVNAYDSALQTVSSITQRLRELLVRAANGTLSKAEREAIAEEIDKIKENLVE 123
Query: 122 IARGSSFNGENWLRTD 137
+A N + D
Sbjct: 124 VANTRIGNEYIFSGYD 139
>gi|68164539|gb|AAY87268.1| predicted flagellar-hook associated protein 3 [uncultured bacterium
BAC17H8]
Length = 288
Score = 77.1 bits (187), Expect = 6e-12, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 3/166 (1%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
L I +++ +Q R+++G + +D+ A + K L + I +++
Sbjct: 3 TLNRITGDIQGIQQRIATGRNILKTSDDPAAGAKISFTKDKKIMLERYNANIDRAQNRLS 62
Query: 76 IAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGEN 132
A++ + ++++ I D +I E+ L+ Q+ +A NG+
Sbjct: 63 QAESAVGIGVNLLQRIYELAVQARNDTNNAGDRATIAMEVRNLKDQMLSLANSRDTNGQY 122
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ +A D G + D ++
Sbjct: 123 IFSGYKVDTKPFVADENGDIIHAGDRGIHTLQISDNQRIATSLDGA 168
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 32/76 (42%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+E + ++ ++ + K+GS +R LQ + + + L DAD+A
Sbjct: 199 MEDEHIGKVNIALEHFSLQQTKLGSQMNRADLQRGVNDKRLLLMNEDISNLEDADIAKLV 258
Query: 420 TRLSALQTQQQLAVQA 435
T L A + A Q+
Sbjct: 259 TELQAKLVSRNAAQQS 274
>gi|217976232|ref|YP_002360379.1| flagellin domain protein [Methylocella silvestris BL2]
gi|217501608|gb|ACK49017.1| flagellin domain protein [Methylocella silvestris BL2]
Length = 292
Score = 77.1 bits (187), Expect = 6e-12, Method: Composition-based stats.
Identities = 61/220 (27%), Positives = 94/220 (42%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+S+LTN SAM+A L NL VQ+ +S+GLR+S AADNA+YWSIA M+S+ GAL
Sbjct: 1 MSSLLTNTSAMTALAALTMTQSNLSKVQNEISTGLRISTAADNASYWSIATKMRSNIGAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AV+DA+ S V ++++I V+ I+ + D IQ+ I Q L
Sbjct: 61 GAVNDALAESGSIVSTMTNALNQSISVVQGIQKNLVTASSADADKAKIQTAIATAQQSLI 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
I S NG+N+L T G+ + D + +L ++
Sbjct: 121 SIGASSIVNGQNYLETTGGTVNLVASYDSTNGVSFLTVDTSNTALFDATTGATSGILGAN 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+L + + + S +
Sbjct: 181 GANYATASILTLDVTTATSGDIANMLKDVEAAISSMTTAA 220
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 66/136 (48%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
+ + D+ I + + M+ ++ I
Sbjct: 157 TVDTSNTALFDATTGATSGILGANGANYATASILTLDVTTATSGDIANMLKDVEAAISSM 216
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
T AA ++G+ ++ + Q+ +I + D++ GVG LVDA+M +T+L+ALQ QQQL +QA
Sbjct: 217 TTAASELGATTTNLATQQTYISNLSDSLTTGVGSLVDANMNEAATKLAALQVQQQLGIQA 276
Query: 436 LSIVNNSTARILSLFR 451
LSI N+++ IL LF+
Sbjct: 277 LSISNSNSQLILKLFQ 292
>gi|255022971|ref|ZP_05294957.1| flagellin [Listeria monocytogenes FSL J1-208]
Length = 123
Score = 77.1 bits (187), Expect = 6e-12, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 38/96 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +E ID I + +G+ SR+ + A + + DAD
Sbjct: 26 VADADSSQEATEAIDELINNISNGRALLGAGMSRLSYNVSNVNNQSIATKASASSIEDAD 85
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA+E + ++ + Q ++ LS N + + L
Sbjct: 86 MAAEMSEMTKYKILTQTSISMLSQANQTPQMLTQLI 121
>gi|148256811|ref|YP_001241396.1| putative flagellin protein, C-terminus [Bradyrhizobium sp. BTAi1]
gi|146408984|gb|ABQ37490.1| Putative flagellin protein, C-terminus [Bradyrhizobium sp. BTAi1]
Length = 516
Score = 76.7 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 69/514 (13%), Positives = 139/514 (27%), Gaps = 63/514 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ + S L+ L Q+ +S+G +V+ A DN + AQ + + +
Sbjct: 3 MSGIVLSASVRQNLLSLQSTAQLLATTQNNLSTGKKVNSALDNPTNFFTAQGLDNRASDI 62
Query: 61 S----------AVSDAIGLGSSKVD-------------------------IAKAGMSKAI 85
S V + G + + + A ++ A
Sbjct: 63 SNLLDGIGNGVQVLQSANTGITSLQKLVDSAKSIANQVLQSAVGYSTKSNVTSAALTGAT 122
Query: 86 D---------------VMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD--------- 121
V++ + A S + + L S +
Sbjct: 123 TTSLIGASSTAVTGSVVLNDNTSTAVAITGSTKLSGTPSTSSNDLASSITTGDTLVVNGT 182
Query: 122 ----IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
IA SS + + + ++I + + T L
Sbjct: 183 TFTFIAGTSSSGTNIGVGDSVTNLLSTIQSATGVTSSITAGAITLTPPAAGLTLSGTSLA 242
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + + A
Sbjct: 243 KLGLSAVGNSLSGQTLTIAATGGGTATSVTFGLGTGQVNSLNDLNAKLAANNLQASFDTA 302
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
T + + + AA + + A N +
Sbjct: 303 TSKITISTTNDAASATIGAIGGTAAASSQSFNGLTAAAPVADATAQSQRSSLVAQYNNVL 362
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
N + T ++ K ++ L ++ + +
Sbjct: 363 AQINTTAADASFNGVNLLNGDTLKLTFNENGKSTLSITGVTFNTGGLGLSTLTAGTDFLD 422
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ +++ ++T A +GS S + +++DF K + + ++ G L AD
Sbjct: 423 NNSANKVIGVLNTASSTLRNEASTLGSNLSVVQIRQDFNKNLINVLQTGSSNLTLADTNE 482
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV ALS+ N S A +L L R
Sbjct: 483 EAANSQALSTRQSIAVSALSLANQSQASVLQLLR 516
>gi|296535170|ref|ZP_06897392.1| flagellin domain protein [Roseomonas cervicalis ATCC 49957]
gi|296264498|gb|EFH10901.1| flagellin domain protein [Roseomonas cervicalis ATCC 49957]
Length = 364
Score = 76.7 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 40/105 (38%), Positives = 57/105 (54%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
T + D A ++ + + ++G+ S I Q + DA+E+G
Sbjct: 260 TEMQDVDMVQIGGAGGAVLKTFVSLTAQVNSTQNELGNDSKFISSQMTYNSARIDAMEEG 319
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+G LVDAD+A ES RL+ALQTQQQLA ALS N++ +LSLFR
Sbjct: 320 LGSLVDADLAKESARLTALQTQQQLATTALSTANSAPEVLLSLFR 364
Score = 75.2 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 72/181 (39%), Gaps = 4/181 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S++TN SA A Q L IN L+ Q +VS+G +VSDA D+ A +++AQ +++D L++
Sbjct: 4 SVITNSSAKVALQSLNKINQQLDTTQKKVSTGYKVSDAKDDGAAYAVAQKVRADVSGLNS 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMS----TIKNKITAGVERGTDSKSIQSEITQLQSQ 118
+D +G + + + ++ + K++ K + L Q
Sbjct: 64 ANDQLGGVNGLLTSTLKAVDAVSTTLTSEVSNVLTKLSDSNLDAETRKQYTEQFKSLTKQ 123
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ + +S+NG L + + + T + +
Sbjct: 124 MNTTLQDASYNGTRLLGSTDTDPLTGQPFEGKPMEVTRNEKGQTYTVNASGTTADQLSFT 183
Query: 179 S 179
+
Sbjct: 184 A 184
>gi|254420175|ref|ZP_05033899.1| Bacterial flagellin C-terminus domain protein [Brevundimonas sp.
BAL3]
gi|196186352|gb|EDX81328.1| Bacterial flagellin C-terminus domain protein [Brevundimonas sp.
BAL3]
Length = 270
Score = 76.7 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI TN+ A A Q L N LE+ Q+RV++G++VS A D+ A +SIA +++ GA+
Sbjct: 1 MASINTNYGAAIALQNLNKTNAQLEMTQNRVNTGMKVSSAKDSGAIYSIATGQRANMGAM 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA-GVERGTDSKSIQSEITQLQSQL 119
+V ++ G S VD+A A + +K + G S +E L +++
Sbjct: 61 ESVRASLQRGQSIVDVALASGDTVTAALEEMKGLAVSLAASTGAAQTSYLTEFRALGAEI 120
Query: 120 RDIARGSSFNGENWLRTDLGSS 141
G++F+G N ++
Sbjct: 121 TSSLAGATFDGVNLWTGATATN 142
Score = 75.9 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/80 (50%), Positives = 55/80 (68%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I T A +G+ S + Q F+ ++DA E G+G LVDAD+A ES +L+ALQT+QQL
Sbjct: 190 ITKITGALSTLGTQSKSVGRQVTFVNKLQDATENGIGNLVDADLAKESAKLTALQTKQQL 249
Query: 432 AVQALSIVNNSTARILSLFR 451
VQALSI N+++ +LSLFR
Sbjct: 250 GVQALSIANSASQTLLSLFR 269
>gi|260774945|ref|ZP_05883846.1| flagellar hook-associated protein FlgL [Vibrio coralliilyticus ATCC
BAA-450]
gi|260609200|gb|EEX35358.1| flagellar hook-associated protein FlgL [Vibrio coralliilyticus ATCC
BAA-450]
Length = 397
Score = 76.7 bits (186), Expect = 8e-12, Method: Composition-based stats.
Identities = 48/435 (11%), Positives = 108/435 (24%), Gaps = 52/435 (11%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I + H+ S LR + Q +++SG ++ A+D+ Q + L
Sbjct: 2 MNRISSFHNYQSVQNDLRRQEAKVHHNQAQLASGKKLMRASDDPLATHYIQNIGQQKEQL 61
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+DAI L ++++ + +S A K + + + ++ +L
Sbjct: 62 RQFTDAIVLSRNRLEHHEVIISNAEQYADEAKRTVMEMINGSLSPEDRIAKRRELLE--- 118
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++F + ++ + G+ + K F R
Sbjct: 119 ---ISNNFLNLSNVQDESGNYIFAGTKPKNQPFFR------------------------- 150
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D++ + + I+ KL +D
Sbjct: 151 ----------DKDGDVVYAGDDYQRKMKISNSLEMPINDPGSKLFMEIDNPYGDFEPQYD 200
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ +T + P R G I +
Sbjct: 201 LKGVSELLLERAINTNPDDQSTYKVTFVDMPDGNYGYQLERDGAVVKADNFDPAIGIKFE 260
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
++ T + + +
Sbjct: 261 DVTIQVKGQITKGDAITLEPRKTYS-----------IFDTFKQAMKLAEGSVSDTSNTAE 309
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ++ A +G+ + + +QE+ + + K D D A
Sbjct: 310 LHQITQEFHAAFIHLNKARTDVGARLNTLDIQEEQHDDFKMTLAKSKSNFEDLDYADAII 369
Query: 421 RLSALQTQQQLAVQA 435
+ Q + QA
Sbjct: 370 EFNENSRALQASQQA 384
>gi|242278492|ref|YP_002990621.1| flagellar hook-associated protein 3 [Desulfovibrio salexigens DSM
2638]
gi|242121386|gb|ACS79082.1| flagellar hook-associated protein 3 [Desulfovibrio salexigens DSM
2638]
Length = 524
Score = 76.7 bits (186), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/315 (11%), Positives = 73/315 (23%), Gaps = 3/315 (0%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+ +L + + +V+ +D+ + + + D I +
Sbjct: 15 NMNRSLTDLVDSNIQAQTQKKVNRPSDDPVGMARILDHRETLATVKQYRDNIDTAKGWLS 74
Query: 76 IAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGEN 132
++ +++ +++ K G + + I E QL QL +A
Sbjct: 75 LSDTTLTQVSTIITRAKGLAEQGASGTITADNREQISYEARQLFQQLVSLANTEYEGKSI 134
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ + + + + + + IT L G
Sbjct: 135 YAGHKVEENAFAEKLWMTTNDSNVSSRNFTITGSADKTIVVQFLDSGDIGGGADLDYRYS 194
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
K + D G + A + A G P
Sbjct: 195 KDGGKTFTTKTLAAGNTSLDFDGVTMDFDLGTPAVNIPVQANAADNTNDASGTWMWVRPT 254
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
G + N D+ VR + S Y+ S V
Sbjct: 255 AQYMGDDADGINVVGMNTNLNGPLNQAEGDFNKDVVVRIDNTTDLASQIEYSYSLDGGVS 314
Query: 313 NTHYYVDTESTTLDS 327
V +
Sbjct: 315 WVGGNVKPADGITSN 329
Score = 53.2 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/309 (7%), Positives = 68/309 (22%), Gaps = 3/309 (0%)
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+F + + + + + T + T
Sbjct: 199 KTFTTKTLAAGNTSLDFDGVTMDFDLGTPAVNIPVQANAADNTNDASGTWMWVRPTAQYM 258
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASG---TISTKKFKLATTSGAWLKAANATFDQA 242
N I + ++ ++
Sbjct: 259 GDDADGINVVGMNTNLNGPLNQAEGDFNKDVVVRIDNTTDLASQIEYSYSLDGGVSWVGG 318
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
+ A P T + + AS + + + +
Sbjct: 319 NVKPADGITSNAVLTIPGGTLTIHSNGGANALASGAQFLVHPDTAAMDVQIQENEFVRIN 378
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
+ S ++ + S + + N + ++
Sbjct: 379 DVGKDIFGGVYQQPGATGASVVFNNNSTYTGDGSSPTQNLLETMGNLVAFLETNNQSGVQ 438
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
E + ++ K A +G +R+ + + + + + + + D D+ T+L
Sbjct: 439 ECLESLNLSQKHVLTKAADVGGRENRLAVADQVLSSLELNEKDRISHIEDVDVGELMTKL 498
Query: 423 SALQTQQQL 431
S Q +
Sbjct: 499 SQQQIVYEA 507
>gi|18075607|emb|CAD11199.1| flagellin B [Helicobacter pylori]
Length = 281
Score = 76.7 bits (186), Expect = 8e-12, Method: Composition-based stats.
Identities = 24/268 (8%), Positives = 69/268 (25%)
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
T+ + +S + G ++ ++ +I + +
Sbjct: 14 FSNTLGVRASYNVMATGGTPVQSGTVRELTINGVEIGTVNDVHKNDADGRLINAINSVKD 73
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVR 290
+ Q + + A + + G + + + + +G +
Sbjct: 74 RTGVEASLDIQGRINLHSIDGRAISVHATSASGQVFGGGNFAGISGTQHAVIGRLTLTRT 133
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
++ + G Y V+ + ++ + +
Sbjct: 134 DARDIIVSGVNFSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQG 193
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
++ D+ +GS+ + + I + + V+ ++
Sbjct: 194 IGAGVTSLKGAMIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQI 253
Query: 411 VDADMASESTRLSALQTQQQLAVQALSI 438
D D A ES S Q A++
Sbjct: 254 RDVDFAEESANFSKYNILAQSGSFAMAQ 281
>gi|163802596|ref|ZP_02196488.1| flagellar hook-associated protein L [Vibrio sp. AND4]
gi|159173679|gb|EDP58498.1| flagellar hook-associated protein L [Vibrio sp. AND4]
Length = 396
Score = 76.7 bits (186), Expect = 8e-12, Method: Composition-based stats.
Identities = 47/434 (10%), Positives = 109/434 (25%), Gaps = 53/434 (12%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T I + H+ S LR + Q++++SG ++ +D+ Q + +
Sbjct: 3 TRISSFHNYQSVQNDLRRQENKIHHNQEQLASGKQLIKPSDDPLATHYIQSIGQQEEQIK 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
DAI L ++++ + +S A + K + + ++ + +L +
Sbjct: 63 QYLDAIVLVRNRLENQEVVVSNAEQFIDESKRISMEMINGAFSPEDRAAK----KRELEE 118
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA F + + G+ + K F RD +G
Sbjct: 119 IANN--FMALANTQDESGNYVFAGTKPKTQPFFRDYDGS--------------------- 155
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ +L +
Sbjct: 156 -----------------------VVYTGDDYQRKMKVASNIELGINYPGNKVFSEIPNPF 192
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + TS + + +V + + P
Sbjct: 193 GDFQPQYDLQEGSELLLSQATSASQDDSNYTVTFVDMSNGKFGYQLEKDGSVVQVDDYSP 252
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
V + + D+ + + + ++ + +
Sbjct: 253 IDGIKYEGVNIQLKGQVSAGDSITLEPRQTFSIFDAFKETMQWSESSVSD---ASATAQL 309
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+M +G+ S + +QE + ++ K D D +
Sbjct: 310 HQMTEEFQAAFVHMNKVRTDVGANLSTLDIQEQNHEDFNLSLAKAKSNFEDLDYSKAVIE 369
Query: 422 LSALQTQQQLAVQA 435
S Q + QA
Sbjct: 370 FSENSRALQASQQA 383
>gi|74317645|ref|YP_315385.1| flagellar hook-associated protein FlgL [Thiobacillus denitrificans
ATCC 25259]
gi|74057140|gb|AAZ97580.1| flagellin, flagellar hook-associated protein 3 FlgL [Thiobacillus
denitrificans ATCC 25259]
Length = 300
Score = 76.7 bits (186), Expect = 8e-12, Method: Composition-based stats.
Identities = 23/179 (12%), Positives = 56/179 (31%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + +L ++ ++ Q ++S+G RV AD+ + A + S
Sbjct: 3 ISTQTLFEAGAARLSELQSDMVKTQQQISTGRRVLTPADDPVAAARALEVTQSQSMNSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
S + + ++ +++ +K I A + + +E+ QL
Sbjct: 63 GVNRDYAKSSLAAVEGSLTGVTELLQDVKTTIVAAGNGTLGDMERGYMATELRGRFEQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A G ++ + D G+ + + +
Sbjct: 123 GMANSRDAQGNYLFSGFQTATPPFSKNAGNAVTYNGDAGQRLMQVDTTRQLAVSHSGQA 181
Score = 46.7 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 22/74 (29%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+E ID + +GS I + + + + L D D
Sbjct: 212 GLETANGKIDLALDNVLTVRASVGSRLQEIDALDSAGEDRHLQYSEILSGLQDLDYTQAL 271
Query: 420 TRLSALQTQQQLAV 433
T LS Q + A
Sbjct: 272 TELSKQQLTLEAAQ 285
>gi|148252124|ref|YP_001236709.1| hypothetical protein BBta_0522 [Bradyrhizobium sp. BTAi1]
gi|146404297|gb|ABQ32803.1| hypothetical protein BBta_0522 [Bradyrhizobium sp. BTAi1]
Length = 522
Score = 76.7 bits (186), Expect = 8e-12, Method: Composition-based stats.
Identities = 70/514 (13%), Positives = 139/514 (27%), Gaps = 63/514 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ + S L+ L Q+ +S+G +V+ A DN + AQ + + +
Sbjct: 9 MSGIVLSASVRQNLLSLQSTAQLLATTQNNLSTGKKVNSALDNPTNFFTAQGLDNRASDI 68
Query: 61 S----------AVSDAIGLGSSKVDI---------------------------------- 76
S V A G + +
Sbjct: 69 SNLLDGIGNGVQVLQAANTGITSLQKLVDSAKSIANQVLQSAVGYSTKSTVTSAALTGAT 128
Query: 77 ------AKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD--------- 121
A V++ + A S + + L S +
Sbjct: 129 ATSLIGASTTAVTGSAVLNDNTSTAVAITGSTKLSGTPGTSSNDLASSITTGDTLVVNGT 188
Query: 122 ----IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
IA SS + + + ++I + + T L
Sbjct: 189 TFTFIAGTSSSGTNIGVGDTVTNLLSTIQSATGVTSSITAGAITLTPPAAGLTLSGTSLA 248
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ + + A+A
Sbjct: 249 KLGLSAVGNSLSGQTLTIAATGGGTATSVTFGLGTGQVNSLNDLNAKLAANNLQATVASA 308
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
T + + + + AA + + A N +
Sbjct: 309 TGKISITTTNDAASSTIGAIGGTAAASSQSFNGLTAAAPVADATAQSQRASLVAQYNNVL 368
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
N + T ++ K ++ L ++ + + +
Sbjct: 369 AQINTTAADASFNGINLLNGDTLKLTFNETGKSTLSITGVTFNTGGLGLSTLTSGTDFLD 428
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ +++ ++T A +GS S + +++DF K + + ++ G L AD
Sbjct: 429 NNSANKVIKVLNTASSTLRDEASTLGSNLSVVQVRQDFNKNLINVLQTGSSNLTLADTNE 488
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV ALS+ N S A +L L R
Sbjct: 489 EAANSQALSTRQSIAVSALSLANQSQASVLQLLR 522
>gi|147678446|ref|YP_001212661.1| flagellar hook-associated protein FlgL [Pelotomaculum
thermopropionicum SI]
gi|146274543|dbj|BAF60292.1| flagellin and related hook-associated proteins [Pelotomaculum
thermopropionicum SI]
Length = 300
Score = 76.3 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 4/160 (2%)
Query: 6 TN-HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN A + L L+ +QD++SS VS +D+ + + S
Sbjct: 4 TNKMIAQTVLNNLAANLNRLQKLQDQMSSLHVVSKTSDDPMIATRVVTLNSVLKQHDQYE 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
I + ++ ++ + D + + + G T ++I EI + +
Sbjct: 64 QNISDAKNWIETTESTLGNVTDALQRAREQAVYGANGTLDQTSREAIAQEIDNIFDNIVQ 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV 161
+A + + T + G+ ++ K
Sbjct: 124 LANTNFAGRYIFGGTKTTTKPFESDGEYKGNEGKEGELKW 163
Score = 52.4 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 37/123 (30%)
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
V+ + + T+ A+ + + + + +D
Sbjct: 163 WEISQKVEMIVNIDGKKVFGDTSAAGDNGIFTVLNNLRAHLRSGDTQAVSNTDLGELDRV 222
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I +G+ ++R+ R E + +L D D+A T S + Q
Sbjct: 223 INGILNLRASLGAKANRLETATSQSGGERTNYEALLSKLNDVDLAKVVTDFSMQENVYQA 282
Query: 432 AVQ 434
A+
Sbjct: 283 ALS 285
>gi|260888522|ref|ZP_05899785.1| flagellar hook-associated protein 3 [Selenomonas sputigena ATCC
35185]
gi|330838174|ref|YP_004412754.1| flagellar hook-associated protein 3 [Selenomonas sputigena ATCC
35185]
gi|260861719|gb|EEX76219.1| flagellar hook-associated protein 3 [Selenomonas sputigena ATCC
35185]
gi|329745938|gb|AEB99294.1| flagellar hook-associated protein 3 [Selenomonas sputigena ATCC
35185]
Length = 446
Score = 76.3 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 40/423 (9%), Positives = 114/423 (26%), Gaps = 4/423 (0%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
++L + ++ S G + +D+ +S ++ + G S
Sbjct: 13 QKQLNTAAEEQAKLMEQ-SDGQSLHRPSDDPVRYSNWLRYSTEQNENEQYKKNVDAGKSW 71
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
+ +S D+ T+K K + + + + ++ ++L +I + +
Sbjct: 72 MQRTDGAVSGMADIFKTLKEKTIQAAQSPHQNTDMAAIAKEMTAKLHEIVSLGNSQQGDR 131
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
S R + T + G
Sbjct: 132 YIFSGQSDLTQPFLLTEKKVARGVP--KTLDDQQSKFFNNTNVSGRMKQMITLQGDDKNE 189
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
+ + + + D ++ + ++ + A + T +
Sbjct: 190 YYLDTKTGDIYSYDFMKDGYKKKVAAGQTEVNPAADRAGTLGGAFNVSDNFLNTGQIKDA 249
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+ G + S+S +V +++ D + + N V +
Sbjct: 250 STTPPAAAGKGANWSQSITVNGQTVNLKLKTIDQQIVKYQGDFKQISMVKKNGAVEPTAD 309
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE-KLAMEEMVSFIDTQI 372
T + D D + ++ A ++ + + V+ D
Sbjct: 310 TVNATAGDIFGTDIFDDENSGNTQSGTAAINDMLTVAAKVDSSDVNWLISDGVTLADESH 369
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A I + + D + ++++ + D+A + +L ++
Sbjct: 370 NNVVIAQDHIAARHNVYKGMADILDDYAVSIKQDISDTNSTDVAKLAVQLMQASAIYNMS 429
Query: 433 VQA 435
+
Sbjct: 430 LSV 432
>gi|18075611|emb|CAD11201.1| flagellin B [Helicobacter pylori]
Length = 281
Score = 76.3 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 24/268 (8%), Positives = 69/268 (25%)
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGA 230
T+ + +S + G ++ ++ +I + +
Sbjct: 14 FSNTLGVRASYNVMATGGTPVQSGTVRELTINGVEIGTVNDVHKNDADGRLTNAINSVKD 73
Query: 231 WLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVR 290
+ Q + + A + + G + + + + +G +
Sbjct: 74 RTGVEASMDIQGRINLHSIDGRAISVHAASASGQVFGGGNFAGISGTQHAVIGRLTLTRT 133
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
++ + G Y V+ + ++ + +
Sbjct: 134 DARDIIVSGVNFSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQG 193
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
++ D+ +GS+ + + I + + V+ ++
Sbjct: 194 IGAGVTSLKGAMIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQI 253
Query: 411 VDADMASESTRLSALQTQQQLAVQALSI 438
D D A ES S Q A++
Sbjct: 254 RDVDFAEESANFSKYNILAQSGSFAMAQ 281
>gi|313620073|gb|EFR91584.1| flagellin [Listeria innocua FSL S4-378]
Length = 159
Score = 76.3 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 38/96 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +E ID I + +G+ SR+ + A + + DAD
Sbjct: 62 VADADSSQEATEAIDELINNISNGRALLGAGMSRLSYNVSNVNNQSIATKASASSIEDAD 121
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA+E + ++ + Q ++ LS N + + L
Sbjct: 122 MAAEMSEMTKYKILTQTSISMLSQANQTPQMLTQLI 157
>gi|86356323|ref|YP_468215.1| flagellin C protein [Rhizobium etli CFN 42]
gi|86280425|gb|ABC89488.1| flagellin C protein [Rhizobium etli CFN 42]
Length = 342
Score = 76.3 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 59/138 (42%), Positives = 88/138 (63%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT +T+ +A++A LR IN Q +VSSG R+ AAD+A+YWS+A +M+SD+ L
Sbjct: 23 MTVKITSAAAVNALAVLRSINKEASQTQQQVSSGYRIETAADDASYWSVATVMRSDSTNL 82
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ DA+GLG++KVD M+ AID++S I+ K+ A E GTD I +EI++ + QL+
Sbjct: 83 GTIGDALGLGAAKVDATYTAMNSAIDLVSQIRAKLVAAREPGTDKDKINAEISEYKEQLK 142
Query: 121 DIARGSSFNGENWLRTDL 138
+ +SF GENWL
Sbjct: 143 SVVESTSFAGENWLLNSD 160
Score = 56.3 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ +M+ D T A IG + +RI Q D+ + D+++K VG LVD DM
Sbjct: 247 TTDAQLVDMLDVTDALFSSLTTTAASIGVMKTRIDDQIDYAADLSDSIDKSVGALVDTDM 306
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
S R A++TQ+Q+AV+A+SI+N + ++IL L
Sbjct: 307 DEASIRQKAIETQKQMAVEAISILNTAASKILILL 341
>gi|330434858|gb|AEC22828.1| flagellin [Bacillus cereus]
Length = 84
Score = 76.3 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
I TN ++M + +R + DR+SSG R+++A+D+AA +IA M++ L
Sbjct: 27 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLG 84
>gi|13560156|emb|CAC36217.1| flagelline [Treponema pectinovorum]
Length = 223
Score = 76.3 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 31/97 (31%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ + + N + + ID +K +G +R+ +
Sbjct: 127 MTAEALGIREIGNENVMSLAGPDLANRAIGTIDEALKKINKQRADLGGYQNRMEYAVRGL 186
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ + ++ R+ D DMA++ + Q Q
Sbjct: 187 DVSAENMQASESRIRDTDMAAQMVEFTKNQVLTQAGT 223
Score = 75.5 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 54/143 (37%), Gaps = 3/143 (2%)
Query: 47 WSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGT 103
++++ M+S L+ S G S + +A+ + + D+M I+
Sbjct: 1 LAVSEKMRSQIRGLNQASQNAQNGISFIQVAEGYLQETTDIMQRIRELAVQSSNGIYSDE 60
Query: 104 DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
D IQ E++QL +++ IA + FNG N L ST + F N ++
Sbjct: 61 DRMQIQVEVSQLVAEVDRIASSAQFNGMNMLTGRFAQSTGENVVTGSMWFHIGANMDQRM 120
Query: 164 TTIDYYLDPETVLLDSSTDGTER 186
+ E + + +
Sbjct: 121 QVFIGTMTAEALGIREIGNENVM 143
>gi|30721720|gb|AAP34191.1| FliC [Pseudomonas aeruginosa]
Length = 159
Score = 75.9 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 33/106 (31%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T S + + + + V ID IK
Sbjct: 54 TSAVSGVVIADTGSTGVGTAAGVAPSATAFAKTNDTVAKIDISTAKGAQSAVLVIDEAIK 113
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A +G++ +R + +K + + V GR+ D D A+E+
Sbjct: 114 QIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDFAAET 159
>gi|119469979|ref|ZP_01612784.1| flagellin [Alteromonadales bacterium TW-7]
gi|119446689|gb|EAW27962.1| flagellin [Alteromonadales bacterium TW-7]
Length = 261
Score = 75.9 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/218 (15%), Positives = 69/218 (31%), Gaps = 3/218 (1%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
L + +++++G +V+ AAD+AA I + S S G S
Sbjct: 9 NFLNQTQQTNNKLAEQLATGKKVNTAADDAAALQIIDRLTSQQNGFSQAVSNAYDGISYT 68
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
+++A +S D +S I+ D ++Q E+ QLQSQ+ + +SF G+
Sbjct: 69 QVSEANLSGVNDAVSRIQELSIQAGNGALTDNDRAALQEEVVQLQSQISETFENASFAGK 128
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
S + + D + +
Sbjct: 129 PLFDGQAVSFQVGADANTNQTVNSTDGSFASALSTIDISTQAGAQAAIDISKQANDEINS 188
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
+ ++ L + I+ + ++ T
Sbjct: 189 QRAELGAFQNTLASTIKGLGTQQENIAASQSRIQDTDY 226
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 13/130 (10%), Positives = 39/130 (30%)
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
+ + + + + + +T + + + + +
Sbjct: 132 DGQAVSFQVGADANTNQTVNSTDGSFASALSTIDISTQAGAQAAIDISKQANDEINSQRA 191
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVN 440
++G+ + + + ++ + R+ D D A ++ + Q +V N
Sbjct: 192 ELGAFQNTLASTIKGLGTQQENIAASQSRIQDTDYALAISQQVSNDILAQSSVALRGQAN 251
Query: 441 NSTARILSLF 450
S IL L
Sbjct: 252 QSAESILGLL 261
>gi|300696952|ref|YP_003747613.1| flagellar filament structural protein (flagellin protein)
[Ralstonia solanacearum CFBP2957]
gi|299073676|emb|CBJ53196.1| flagellar filament structural protein (flagellin protein)
[Ralstonia solanacearum CFBP2957]
Length = 273
Score = 75.9 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/264 (12%), Positives = 84/264 (31%), Gaps = 3/264 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN S++ Q L L+ R+S+GLRV+ A D++A ++ + + + + +
Sbjct: 3 LSLNTNISSLQTQQALSQSQSALQKSLQRLSTGLRVNSAQDDSAAYAASSSLTTTLNSQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
+S + A + + + + + ++ D ++ E QL +
Sbjct: 63 QGIQNANGANSYLQTADSYLGQVENNLQRMRQLAVESNNGGLSAADQTNLDKEYQQLATA 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ I +++NG + S+T ++ N + +
Sbjct: 123 NKSIETNANYNGNKLFDGSVASTTFQYGQNAATDVATVTNVDMSAYGTLSGTSVTSAANA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ L + ++ + + +T A +
Sbjct: 183 TAAQAAIDTDLTSLKAARASLGAQQSGLASTINTLTSNNTALSAAKSTLIDTDYAAETSN 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTT 262
+ + + A + +
Sbjct: 243 MTRQNILQQAGTAMLAQANSAPNS 266
Score = 74.0 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 52/139 (37%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + + V ++ + + + IDT +
Sbjct: 135 NKLFDGSVASTTFQYGQNAATDVATVTNVDMSAYGTLSGTSVTSAANATAAQAAIDTDLT 194
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
AA +G+ S + + + A+ L+D D A+E++ ++ QQ
Sbjct: 195 SLKAARASLGAQQSGLASTINTLTSNNTALSAAKSTLIDTDYAAETSNMTRQNILQQAGT 254
Query: 434 QALSIVNNSTARILSLFRG 452
L+ N++ IL+L +G
Sbjct: 255 AMLAQANSAPNSILNLLKG 273
>gi|88858136|ref|ZP_01132778.1| flagellar hook-associated protein 3 [Pseudoalteromonas tunicata D2]
gi|88819753|gb|EAR29566.1| flagellar hook-associated protein 3 [Pseudoalteromonas tunicata D2]
Length = 519
Score = 75.9 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 53/519 (10%), Positives = 111/519 (21%), Gaps = 77/519 (14%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + L+ +L+ Q+ +SSG +V +D+ + +K + S
Sbjct: 3 IGTANFYQRSLASLQSRQVSLDRAQEELSSGKKVIRPSDDPVASNSIIKLKKELDVSSRY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLR 120
DA + A+ ++ +++ ++ G + + +I +
Sbjct: 63 LDAQSTANRYNREAETSLTSMNNILLRLQESLSGAINGALDNDGLIAYREQIASRYEEYE 122
Query: 121 DIARGSSFNGENWLRTD-----------LGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
I + NG+ G I + +
Sbjct: 123 GIVNQKNANGDYMFSGFQTRTKPYQSDSFGYFDYQGDSGQRQVLIAPSFDVAVTEPGNSF 182
Query: 170 LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
+ + + + S A T
Sbjct: 183 ASNVASKFSHYRPASAAASGAQVSLGFVTDGAEYRAPTAPANTYQIQFSGAVPPQADTWQ 242
Query: 230 AWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
+ A P T + ++ V + + +
Sbjct: 243 VVDVSLPAPNVVNGPYGYSPGDEIEFQGISVKTDVNNPPQAGDVFDMQPDKKADETSVLW 302
Query: 290 RATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRH 349
S G + +T D K E+ +
Sbjct: 303 MFQQAIDAMSITGTGYTAKPLAASTVSIAGGNIKFPDEHKFADFEVVFPSAGQVEVREVD 362
Query: 350 ANTDAYNEKLAMEEM----------------VSFIDTQIKCA------------------ 375
+T ++
Sbjct: 363 RSTTPPTVLATPVSAQAYNPAGTLLEFNGIEITVAGAAGNQTTIPPAPAPNFPETIRLDR 422
Query: 376 --TAAAGK-IGSISSRIHLQEDFIKLMRDAVEK---GVGRLVDA---------------- 413
+G++ + + I R + + DA
Sbjct: 423 PENNRRADVLGALLEEVTNAQTNIDNTRSQIGARMNSISNEGDAQLLFKEATKITLADLE 482
Query: 414 --DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D+ T L + Q A QA + V LSLF
Sbjct: 483 EIDVYEAVTNLENSRVGLQAAQQAFARV----QN-LSLF 516
>gi|292670030|ref|ZP_06603456.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292648331|gb|EFF66303.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 450
Score = 75.9 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 54/434 (12%), Positives = 125/434 (28%), Gaps = 4/434 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +N+ + L +++Y + ++ G ++ +DN+ +S
Sbjct: 5 ISSNYMVQRYQKDLNELDYTKSKLMEQ-GDGSKLHRPSDNSVDYSRYLRYDISESENDRY 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQ--SEITQLQSQLRD 121
++ G S ++ + +S D+ T K K G D KS + ++++ ++
Sbjct: 64 QSSVKAGISWMNSTQTALSGMEDIQKTFKAKTIQGANDDKDEKSGDWPAIAREMKAGVQQ 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I + + + + +R + DS+
Sbjct: 124 IISLGNTQLGDRYIFSGQADLKQPFTMTSEADMRRRGLAKTLDDRQAAFFNNASNNDSAD 183
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ L + + DI + G +T S A T
Sbjct: 184 FLHQMLSLDGSDGNTYYLNTLTGDIYTKEFVQEGYKDVVASGRSTVSTADRVGNITTGAN 243
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
G + S + +V I + I+
Sbjct: 244 FIKNNFKNTGEIVNDPVGAPGMGANWSDTTAVPGVTLKFSTVRQQIVTYSGDMRYISMVK 303
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
++ VD L K+ E + +T + T + + +
Sbjct: 304 QNGSTEPTADTVNKTGVDVFGRDLFDDKNSGNEPSGTAMVNN-MLTVYERTKSADARWLS 362
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ V+ D + A + GS S + + + + + + D+A +T+
Sbjct: 363 SDGVTLADVANQVTLQAHTETGSRSRLYTDMTSILTDHAENITRDITNVSATDVAELATK 422
Query: 422 LSALQTQQQLAVQA 435
+ QT +++
Sbjct: 423 MMQQQTIMSMSLSM 436
>gi|256376484|ref|YP_003100144.1| flagellar hook-associated protein 3 [Actinosynnema mirum DSM 43827]
gi|255920787|gb|ACU36298.1| flagellar hook-associated protein 3 [Actinosynnema mirum DSM 43827]
Length = 292
Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/220 (12%), Positives = 74/220 (33%), Gaps = 2/220 (0%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
+ L+ ++ +++ +SSG +++ +D A ++++ A S +
Sbjct: 10 SMSTGILSSLQRNQNKMDQLREAISSGKQLTKPSDGPTDTVSAMQLRTEIAERGAYSRSA 69
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQLRDIARG 125
G +++ A+ +S D++ ++ + + ++I +EI +++ + +A
Sbjct: 70 VDGQARLGAAETALSSTSDLLLRARDLVLQGKSAQSQDSREAIAAEIDAIRTSMIGLANT 129
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+ + + T G + S +G + T + + +T S+
Sbjct: 130 TYLDRPVFGGTTAGGQAFASDGSYLGDDGQVMRRIANGTQVRVDVPADTFGTGSNQVFKV 189
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+ D S T T
Sbjct: 190 LESIAGNMRSNPAGLSADLDRLDSGIKTVNTAVTGIGTRY 229
Score = 45.5 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 33/85 (38%)
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
+ + + + +D+ IK A IG+ ++ +D + + + ++ D
Sbjct: 196 NMRSNPAGLSADLDRLDSGIKTVNTAVTGIGTRYGQLSAADDAGQAQVVTLSARLSQIED 255
Query: 413 ADMASESTRLSALQTQQQLAVQALS 437
D+A+ L + ++ A +
Sbjct: 256 VDVAAAVVELQTQTVAYEASLAATA 280
>gi|84502369|ref|ZP_01000505.1| flagellin family protein [Oceanicola batsensis HTCC2597]
gi|84389181|gb|EAQ01978.1| flagellin family protein [Oceanicola batsensis HTCC2597]
Length = 278
Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/139 (32%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTNHSAM+A LR IN +L Q R+S+GL +S DNAAY+SI++ M D+G
Sbjct: 1 MSSILTNHSAMTALSTLRSINSDLSATQGRISTGLNISSGKDNAAYFSISKTMSGDSGMF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD-SKSIQSEITQLQSQL 119
A+ + + L + V A+ G +D+ + ++ + +Q+E+ +L +++
Sbjct: 61 KAIDENLTLQQNAVSTARLGAETLVDLANDFVERVAFAQGGTEEVRADVQAELNELTARM 120
Query: 120 RDIARGSSFNGENWLRTDL 138
S+FNG +++ +
Sbjct: 121 ATTISQSTFNGADYVNSTA 139
Score = 58.2 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 57/97 (58%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ A + + Q+ A AAA +G I Q+DF+ + D ++ G+G +VDA+
Sbjct: 182 ADSAGAQATALQTAEAQLSAAVAAATSLGIAEKSIETQKDFLGELTDRLDSGIGSMVDAN 241
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
M E+ RL ALQ QQQLA Q+LSI N++ ILSLFR
Sbjct: 242 MEDEAARLQALQVQQQLATQSLSIANSAPQNILSLFR 278
>gi|17548603|ref|NP_521943.1| flagellin protein [Ralstonia solanacearum GMI1000]
gi|17430851|emb|CAD17533.1| flagellin protein [Ralstonia solanacearum GMI1000]
gi|299068769|emb|CBJ40009.1| flagellar filament structural protein (flagellin protein)
[Ralstonia solanacearum CMR15]
Length = 273
Score = 75.5 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/264 (11%), Positives = 85/264 (32%), Gaps = 3/264 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN S++ Q L L+ R+S+GLRV+ A D++A ++ + + + + +
Sbjct: 3 LSLNTNISSLQTQQALSQSQSALQKSLQRLSTGLRVNSAQDDSAAYAASSSLTTTLNSQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
+S + A + + + + + ++ D ++ E QL +
Sbjct: 63 QGIQNANGANSYLQTADSYLGQVENNLQRMRQLAVESNNGGLSAADQTNLDKEYQQLATA 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
++I +++NG + S+T ++ N + +
Sbjct: 123 NKNIETNANYNGNKLFDGSVASTTFQYGQNAATDVTTVTNVNMSTFGTLTGTSVTSAANA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ L + ++ + + +T + +
Sbjct: 183 TAAQAAIDTDLTSLKAARASLGAQQSGLASTINTLTSNNTALSAAKSTLIDTDYASETSN 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTT 262
+ + + A + +
Sbjct: 243 MTRQNILQQAGTAMLAQANSAPNS 266
Score = 73.2 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 51/139 (36%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + + V ++ + + IDT +
Sbjct: 135 NKLFDGSVASTTFQYGQNAATDVTTVTNVNMSTFGTLTGTSVTSAANATAAQAAIDTDLT 194
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
AA +G+ S + + + A+ L+D D ASE++ ++ QQ
Sbjct: 195 SLKAARASLGAQQSGLASTINTLTSNNTALSAAKSTLIDTDYASETSNMTRQNILQQAGT 254
Query: 434 QALSIVNNSTARILSLFRG 452
L+ N++ IL+L +G
Sbjct: 255 AMLAQANSAPNSILNLLKG 273
>gi|148256809|ref|YP_001241394.1| putative flagellin protein, C-terminus [Bradyrhizobium sp. BTAi1]
gi|146408982|gb|ABQ37488.1| Putative flagellin protein, C-terminus [Bradyrhizobium sp. BTAi1]
Length = 514
Score = 75.5 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 66/514 (12%), Positives = 139/514 (27%), Gaps = 63/514 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ + S L+ L Q+ +++G +V+ A DN + AQ + + +
Sbjct: 1 MSGIVLSASVRQNLLSLQSTAQLLATTQNNLATGKKVNSALDNPTNFFTAQGLDNRASDI 60
Query: 61 S----------AVSDAIGLGSSKVDIAKAGMSKAID------------------------ 86
S V A G + + +
Sbjct: 61 SNLLDGIGNGVQVLQAANTGITSLQKLVDSAKSIANQVLQSSVGYSTKSNVTSAALAGAT 120
Query: 87 ----------------VMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD--------- 121
V++ + A S + + L S +
Sbjct: 121 ASSLIGASTTAVTGSVVLNDNTSSAVAITGTTKLSGTPGTSSNDLASSITTGDTLVVNGT 180
Query: 122 ----IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
IA SS + + + ++I + + T L
Sbjct: 181 TFTFIAGTSSSGTNIGVGDTVTNLLSTIQSATGVTSSITAGAITLTPPAAGLTLSGTSLA 240
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
I + + +
Sbjct: 241 KLGLSAVGNSLSGQTLTIAATGGGTATSITFGLGTGQVNSLNDLNTKLAANNLQASFDTS 300
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ + + + + AA + + A N +
Sbjct: 301 SGKISITTTNDAASATIGAIGGTAAASSQSFNGLTAAAPVADATAQSQRSSLVAQYNNVL 360
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
N + T ++ K +++ L ++ + +
Sbjct: 361 QQINTTAADASFNGVNLLNGDTLKLTFNETGKSSLSITGVTFNIAGLGLSNLTAGTDFLD 420
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++++ ++T + A +GS S + +++DF K + + ++ G L AD
Sbjct: 421 NNSANKVLNVLNTASSTLRSEASTLGSNLSVVQIRQDFNKNLINVLQTGSSNLTLADTNE 480
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV ALS+ N S A +L L R
Sbjct: 481 EAANSQALSTRQSIAVSALSLANQSQASVLQLLR 514
>gi|218507706|ref|ZP_03505584.1| flagellin C protein [Rhizobium etli Brasil 5]
Length = 135
Score = 75.5 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/112 (44%), Positives = 73/112 (65%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT +T+ +A++A LR IN Q +VSSG R+ AAD+A+YWS+A +M+SD+ L
Sbjct: 23 MTVKITSAAAVNALSVLRSINKEASQTQQQVSSGYRIETAADDASYWSVATVMRSDSTNL 82
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEI 112
V DA+GLG++KVD M+ AID+++ I+ K+ A E GTD I +EI
Sbjct: 83 GTVGDALGLGAAKVDATYTAMTSAIDLVTQIRAKLVAAREPGTDKDKINAEI 134
>gi|37654966|gb|AAQ96738.1| flagellin [Burkholderia vietnamiensis]
Length = 228
Score = 75.5 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 40/109 (36%)
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
S + + + + + + ++ ID +K +G+ + +
Sbjct: 120 FGSTTWNSSGMSLTGLSVSSQSSAQSAITAIDAALKQVNTFQATLGAAQNTFQAAISTTQ 179
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+ ++ DAD A+E+ LS Q QQ + L+ N+ ++
Sbjct: 180 TQATNMSAARAQITDADFATETANLSKAQVLQQAGISVLAQANSLPQQV 228
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 65/191 (34%), Gaps = 3/191 (1%)
Query: 40 AADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV 99
AAD+AA +IA + AL+ G S + A + ID + I+
Sbjct: 1 AADDAAGLAIATSQTARINALTQGVANANNGISMIQTANGALQSTIDNLQRIRTLAVQSG 60
Query: 100 E---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRD 156
+ + ++QSE+T ++ +A +SFN ++ L S A + +
Sbjct: 61 DGSLDSSARSNLQSEVTTRLGEIDRVASQTSFNSQSILGGISTVSFQIGAAASQTVSVDF 120
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
+ + + + + + T L + + + ++ + + T
Sbjct: 121 GSTTWNSSGMSLTGLSVSSQSSAQSAITAIDAALKQVNTFQATLGAAQNTFQAAISTTQT 180
Query: 217 ISTKKFKLATT 227
+T
Sbjct: 181 QATNMSAARAQ 191
>gi|397464|emb|CAA81035.1| flagellin [Leptothrix discophora]
Length = 134
Score = 75.5 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 34/85 (40%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
T A T + + ID + G++ +R +++ +
Sbjct: 50 DTNTAITGDITTAANAKTALDNIDKALTEVNTERANFGAVQNRFEAVVSTLQVASENQAA 109
Query: 406 GVGRLVDADMASESTRLSALQTQQQ 430
GR++DAD A+E++ LS Q QQ
Sbjct: 110 ARGRIMDADFAAETSNLSRSQILQQ 134
>gi|308273551|emb|CBX30153.1| hypothetical protein N47_D29620 [uncultured Desulfobacterium sp.]
Length = 288
Score = 75.5 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 61/182 (33%), Gaps = 3/182 (1%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
L I+ + SSG +SD +D+ + + +KS L + + LG S +
Sbjct: 15 NLGKISEEMSKANQIASSGKLISDLSDDPVGLTQSLKIKSVISGLDQLGRNVSLGKSWLS 74
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+++ ++ D++S K T S + + ++ +A
Sbjct: 75 ASESALTGVQDLISDTKALCVQMASSTTGASQRASAAATVQNTLDEILSLANTEVSGRYI 134
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ T S+ + +G+ TT + + V T + L
Sbjct: 135 FSGTKTDSAAFDQDGNYLGNDEPFAIKIGINTTASVGSNGQGVFGTIFTTLNDLKNNLTG 194
Query: 193 NH 194
N+
Sbjct: 195 NN 196
Score = 39.0 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 23/196 (11%), Positives = 56/196 (28%)
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
I ++T+G S S + T + + + +
Sbjct: 87 ISDTKALCVQMASSTTGASQRASAAATVQNTLDEILSLANTEVSGRYIFSGTKTDSAAFD 146
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
+ +++ + + + + N N ++ +
Sbjct: 147 QDGNYLGNDEPFAIKIGINTTASVGSNGQGVFGTIFTTLNDLKNNLTGNNIDGIQASLDS 206
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+ T IGS +R+ ++E + + V + DAD+A + +
Sbjct: 207 LTRHFNDITNKISDIGSKMNRMEIKEQIFQDSKLVNTDRVSAIEDADIADAIINVKEKEL 266
Query: 428 QQQLAVQALSIVNNST 443
Q A+ + S V +
Sbjct: 267 AYQAALNSSSKVMQLS 282
>gi|89214260|gb|ABD64442.1| flagellin [Bacillus thuringiensis serovar sylvestriensis]
Length = 217
Score = 75.5 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 16/140 (11%), Positives = 44/140 (31%), Gaps = 1/140 (0%)
Query: 31 VSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMST 90
+++G +++ +DN +I + + + S + IA+A + +++
Sbjct: 3 LATGKKLNHTSDNPTNVAIVTRIHAKANGMCVTIRNNKDAISMLRIAEAALQTVTNILQR 62
Query: 91 IKNKITAGVE-RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSV 149
+++ ++ S+ E L Q+ I + FN + +
Sbjct: 63 MRDLAAQSANRTNSNRDSLNKEFQSLTEQIDYIDAKTGFNDLSVFDGQNRPVSLDDINHT 122
Query: 150 IGSFIRDDNGKVQITTIDYY 169
+ Q
Sbjct: 123 VNITKHIPPSPTQHDIKIST 142
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/186 (8%), Positives = 47/186 (25%)
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
AK A + ++ + S + +
Sbjct: 26 HAKANGMCVTIRNNKDAISMLRIAEAALQTVTNILQRMRDLAAQSANRTNSNRDSLNKEF 85
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T T + + + L + + + + + +
Sbjct: 86 QSLTEQIDYIDAKTGFNDLSVFDGQNRPVSLDDINHTVNITKHIPPSPTQHDIKISTEQE 145
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ I+ ++ + +G++ +R+ + + A+ ++ DA +A E +
Sbjct: 146 ARTTIHKIEEALQNVSLHRADLGAMINRLQFNIENLNSRSIALTDASSQIEDASVAQEMS 205
Query: 421 RLSALQ 426
Sbjct: 206 SFIKYN 211
>gi|313624717|gb|EFR94671.1| flagellin [Listeria innocua FSL J1-023]
Length = 161
Score = 75.5 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 38/96 (39%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + +E ID I + +G+ SR+ + A + + DAD
Sbjct: 64 VADADSSQEATEAIDELINNISNGRALLGAGMSRLSYNVSNVNNQSIATKASASSIEDAD 123
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
MA+E + ++ + Q ++ LS N + + L
Sbjct: 124 MAAEMSEMTKYKILTQTSISMLSQANQTPQMLTQLI 159
>gi|27378806|ref|NP_770335.1| flagellin [Bradyrhizobium japonicum USDA 110]
gi|27351955|dbj|BAC48960.1| flaA [Bradyrhizobium japonicum USDA 110]
Length = 274
Score = 75.5 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +I TN +A +A + L + ++SSG R++ A+D+AA +I+ + SD L
Sbjct: 1 MPAINTNTAANAAVRYLNVNSAQETSSLSKLSSGSRITSASDDAAGLAISTRISSDVTTL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI---TAGVERGTDSKSIQSEITQLQS 117
+ ++ + A G S D+++ +K+ +G + I SE +QL S
Sbjct: 61 QQAATNASQATAILQTADGGASNISDILARMKSLASESASGTTTDSSRAYINSEFSQLTS 120
Query: 118 QLRDIARGSSFNGENWLRTDL 138
++ IA G+ ++ ++ L
Sbjct: 121 EIDSIASGTRYSSQSLLDGSS 141
Score = 61.7 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 45/96 (46%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ++ +DT I +AA IG+ SR + D I ++ + D D
Sbjct: 178 VSTQSGATSALTTLDTAIDTVSAARASIGAQESRFNFSADSISTQTQNLQNANSAIKDVD 237
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+A+E ++LS+ + + Q AV AL+ N +L L
Sbjct: 238 IAAEQSKLSSAEVKTQAAVSALAAANQMPQYLLKLL 273
>gi|59712474|ref|YP_205250.1| flagellar hook-associated protein FlgL [Vibrio fischeri ES114]
gi|46394803|gb|AAS91568.1| flagellar hook-associated protein 3 [Vibrio fischeri ES114]
gi|59480575|gb|AAW86362.1| flagellar hook-associate protein 3, FlgL [Vibrio fischeri ES114]
Length = 397
Score = 75.2 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/430 (10%), Positives = 113/430 (26%), Gaps = 54/430 (12%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N+ A+ + + +++SG ++ A D+ AQ + L +D
Sbjct: 9 HNYQAV--QNDISRQEAKVHHNSAQLASGKKLLTAGDDPVAALYAQNLTQKKEELRQYTD 66
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
I L ++++ + ++ A K + + + + L+
Sbjct: 67 TITLARNRLERHEVAIANAEQFADDAKRSVMEMINGSLAPEDRYAHAQDLK------GIA 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S+F + + G+ S K F + ++G V +Y +
Sbjct: 121 SNFLNLTNMLDESGNYLFSGTKPKTQPFFKANDGTVAYAGDEYQRKLKVSGSIEVA---- 176
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
++ KL T + + +G
Sbjct: 177 -------------------------------VNDAGSKLFTEIKNPFGDYDPQYALQEGS 205
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
+ T S S S + + + G+ + I +
Sbjct: 206 ELLLSQATNTNYTDPATYEVSFSASANGQYNYQLSKDGSVVKNAQFDPSEGIKYEGVDIQ 265
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
++ + T + + + ++++
Sbjct: 266 IRGQLKSGDVITLEPKKTISIFDSFKKASELALNDVA-----------DASTTAELQQVT 314
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ A ++G+ + + QE + + K + + D D A +
Sbjct: 315 DEFHAAFIHLSQARAEVGTRQNTLDQQEQQHQDFDLTLSKSLSSIEDLDYAQAVIEFNEN 374
Query: 426 QTQQQLAVQA 435
Q + QA
Sbjct: 375 TRALQASQQA 384
>gi|302878283|ref|YP_003846847.1| flagellar hook-associated protein 3 [Gallionella capsiferriformans
ES-2]
gi|302581072|gb|ADL55083.1| flagellar hook-associated protein 3 [Gallionella capsiferriformans
ES-2]
Length = 401
Score = 75.2 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/422 (9%), Positives = 102/422 (24%), Gaps = 52/422 (12%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +N + L L Q +++SG R+ AA + + A + + +
Sbjct: 3 ISSNTIFDNNVATLGAQQARLVQTQQQIASGRRLLTAASDPVAATRALDVTQADAINTQQ 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ G + I+++ ++ ++ ++ A TD +I + +L
Sbjct: 63 TANRGTVKDPLSISESTLASVTLLLQDVRTAAVAAGNATLTNTDRATIGKNLNGRLQELI 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + +G +T +A + + D+G+ +
Sbjct: 123 GLANSTDGSGNALYAGFQSKTTPFVASTAGVVSYQGDDGQRLVQVDPGRQIAANDSGADV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + SV + +
Sbjct: 183 FMRIKDGNGTFATQALATNTGGGIISAGSVLNPAALTGNAYSVSFA-------------- 228
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A + +T+
Sbjct: 229 -----------------------------------VAAGATTYSVTNTTTGVPVAGMTAQ 253
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
P + ++ G + ++ L T N
Sbjct: 254 PYTSGQAISFDGLQFNMQGAPANGDSFTVKPSANQSVFKTLSDLITTLSTPLSGANVSNG 313
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + +D + IG+ + I + + +++ + L D D +
Sbjct: 314 LASGIVNVDNALSNVLNTRSSIGARLNEIDSLQASGDSIGVQLKQSLSALQDTDYNKAIS 373
Query: 421 RL 422
L
Sbjct: 374 DL 375
>gi|203284103|ref|YP_002221843.1| flagellar hook-associated protein 3 [Borrelia duttonii Ly]
gi|201083546|gb|ACH93137.1| flagellar hook-associated protein 3 [Borrelia duttonii Ly]
Length = 424
Score = 75.2 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/404 (10%), Positives = 111/404 (27%), Gaps = 29/404 (7%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G R+++ ++ + + + S+ L+ S I K+ + + ++++ K
Sbjct: 36 GKRITNLRNDPTGVTHSIRLDSNIFKLNTYSHNINNARGKLRYVEGYLQSLSNILTRAKE 95
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
G + + ++ + L D+ ++ G + G+ + +
Sbjct: 96 IAIKGANGTYGTDDKKIIAKEINAILEDVLAIANAKGADGYSMFAGTK---VDAEAFKAT 152
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
K+ + + + S TE + +
Sbjct: 153 RAKKINKLTQDRAETQIIKIDYNGNQSEQTTEICNGIYISTNYPGSELFFSQNQYITSSK 212
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + A A IA I A+ + + + +
Sbjct: 213 NVDNFVVQENTKIYIDNVEIVLTAGDTAADIIAKINESSAPVEASLDNILNSIIINTTTP 272
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
G++ + + S N D+ D+ ++ +
Sbjct: 273 HQMWITEEEGSTVLTDLGILNQNNDSKEPPYNVANNAEIRNRTIFDSLIDLRDNLEENRE 332
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + ++ ID + + +G+ +R+ L
Sbjct: 333 GLIGSRN------------------------LAEIDESLSKILSTLADLGTKENRLELSY 368
Query: 394 DFIKLMRDAVEKGVGRLVDADMASEST--RLSALQTQQQLAVQA 435
+ ++ + + D D+ T +++L Q L V A
Sbjct: 369 ARLSKEIMDMKDDMVQYTDLDVTKAITDLNMTSLAYQVSLGVSA 412
>gi|254459365|ref|ZP_05072786.1| flagellin [Campylobacterales bacterium GD 1]
gi|207083978|gb|EDZ61269.1| flagellin [Campylobacterales bacterium GD 1]
Length = 277
Score = 75.2 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 43/128 (33%)
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+ E S + + +S ID +K +G
Sbjct: 150 FVTHTGADANETQSLSIGDAQTASLLGGVIDVTTQAGASASLSTIDDAMKSIDGMRADLG 209
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
+ +++ I + + V ++ D D A+ES S + Q+ + N ST
Sbjct: 210 AAQNQLMSNIRNISVTQVNVASAESQIRDIDFAAESANFSKMNIMSQIGSFTQAQANAST 269
Query: 444 ARILSLFR 451
A + +LF+
Sbjct: 270 ASVTNLFK 277
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 62/181 (34%), Gaps = 3/181 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +N +M+A+ N + ++SG ++ AA +++ IA + + L
Sbjct: 5 INSNIGSMNANLHSNLNNMGVNKSLSSLASGSAINYAAYDSSGLGIANQLSAQVSGLGRA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
V +A + + + + ++ D IQ EI L
Sbjct: 65 IMNSNESIGMVQVADGALQEYGNNLDRVRVLTLQASNGTLNSDDRAIIQKEIDALMESAD 124
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
DIA+ + FNG N L GSS + G+ + L + + +
Sbjct: 125 DIAKTTKFNGINLLDGTGGSSGNGTFVTHTGADANETQSLSIGDAQTASLLGGVIDVTTQ 184
Query: 181 T 181
Sbjct: 185 A 185
>gi|83747636|ref|ZP_00944672.1| FliC [Ralstonia solanacearum UW551]
gi|207739717|ref|YP_002258110.1| flagellin protein [Ralstonia solanacearum IPO1609]
gi|83725688|gb|EAP72830.1| FliC [Ralstonia solanacearum UW551]
gi|206593099|emb|CAQ60005.1| flagellin protein [Ralstonia solanacearum IPO1609]
Length = 273
Score = 74.8 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/264 (12%), Positives = 85/264 (32%), Gaps = 3/264 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN S++ Q L L+ R+S+GLRV+ A D++A ++ + + + + +
Sbjct: 3 LSLNTNISSLQTQQALSQSQSALQKSLQRLSTGLRVNSAQDDSAAYAASSSLTTTLNSQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
+S + A + + + + + ++ D ++ E QL +
Sbjct: 63 QGIQNANGANSYLQTADSYLGQVENNLQRMRQLAVESNNGGLSAADQTNLDKEYQQLATA 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
++I +++NG + S+T ++ N + +
Sbjct: 123 NKNIETNANYNGNKLFDGSVASTTFQYGQNAATDAATVTNVNMSTFGTLTGTSVTSAANA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ L + ++ + + +T A +
Sbjct: 183 TAAQAAIDTDLTSLKAARASLGAQQSGLASTINTLTSNNTALSAAKSTLIDTDYAAETSN 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTT 262
+ + + A + +
Sbjct: 243 MTRQNILQQAGTAMLAQANSAPNS 266
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 51/139 (36%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + + V ++ + + IDT +
Sbjct: 135 NKLFDGSVASTTFQYGQNAATDAATVTNVNMSTFGTLTGTSVTSAANATAAQAAIDTDLT 194
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
AA +G+ S + + + A+ L+D D A+E++ ++ QQ
Sbjct: 195 SLKAARASLGAQQSGLASTINTLTSNNTALSAAKSTLIDTDYAAETSNMTRQNILQQAGT 254
Query: 434 QALSIVNNSTARILSLFRG 452
L+ N++ IL+L +G
Sbjct: 255 AMLAQANSAPNSILNLLKG 273
>gi|317406194|gb|EFV86443.1| flagellar hook-associated protein 3 [Achromobacter xylosoxidans
C54]
Length = 419
Score = 74.8 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/435 (10%), Positives = 108/435 (24%), Gaps = 34/435 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T+ + + + ++ + ++V SG + AD+ S+A + S
Sbjct: 3 LSTSMMYSNGLKGVLAQESDMNRLVEQVGSGKKFLTPADDPLSASLAINVAQTQSMNSTY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL---QSQLR 120
+ + + + ++ ++ ++ Q+ T L + L
Sbjct: 63 ALNRNTAKTNLGQENNVLDSITTALADVRTRVVQAGNGTFADSDRQALSTALKNARDALL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + NG+ G + G+ + + +
Sbjct: 123 GLANSTDGNGQYLFSGYQGGVVPYSQDTTGKIVYSGATGERTVQVDQSRQMSTSDIGSDI 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + VSV S I +
Sbjct: 183 FNRANPGSQAYVSTAAQANTGTAQFSTVSVTPGSPNIGKDFRLQFESDPTTGNMGYRVIT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
P+ T T + S + + + S D
Sbjct: 243 TDPNANPPVPPVTTPAPPAAPTVYTPDAAIDFGGVSVVIKGTPQNGDVIDVQSVQSADVD 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T ++ K ++ D + + +
Sbjct: 303 MFNTLDSLIKTLDSPIAGDPVALAKLNNELATAN-------------------------- 336
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ T A +G+ + + + + K + L D D S ++
Sbjct: 337 -----KKLSTNYDNVQTVAASVGARMNELDALDATGTQKGLSYSKSLSDLEDLDYYSGAS 391
Query: 421 RLSALQTQQQLAVQA 435
+L+ Q Q A A
Sbjct: 392 QLALRQVALQAASAA 406
>gi|326792654|ref|YP_004310475.1| flagellar hook-associated protein 3 [Clostridium lentocellum DSM
5427]
gi|326543418|gb|ADZ85277.1| flagellar hook-associated protein 3 [Clostridium lentocellum DSM
5427]
Length = 393
Score = 74.8 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 42/116 (36%), Gaps = 3/116 (2%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+ L + ++S+G ++ +D+ A +K +
Sbjct: 11 NTLNNLYKNISAVNQSFAQMSTGKKIQTVSDDPIIAGRAIKLKVNVLETQQYQKNAKEAR 70
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIAR 124
S +++ + M ++ +I+ K D I+++I QL QL++ A
Sbjct: 71 SWMEVTETSMDNMNKILESIRTKCVQASTGTLEEKDKAVIKTDIMQLWEQLQEEAN 126
>gi|84502367|ref|ZP_01000503.1| flagellin family protein [Oceanicola batsensis HTCC2597]
gi|84389179|gb|EAQ01976.1| flagellin family protein [Oceanicola batsensis HTCC2597]
Length = 278
Score = 74.8 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 1/140 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTNHSAM+A LR IN +L Q R+S+GL +S DNAAY+SI++ M D+G
Sbjct: 1 MSSILTNHSAMTALSTLRSINSDLSDTQGRISTGLNISSGKDNAAYFSISKTMAGDSGMF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN-KITAGVERGTDSKSIQSEITQLQSQL 119
A+ + + L + V A+ G +D+ A +Q+E+ +L +++
Sbjct: 61 KAIDENLTLQKNAVSTARLGAETLVDLAQDFVERVAFAQGGTQEVRNDVQAELDELAARM 120
Query: 120 RDIARGSSFNGENWLRTDLG 139
S+FNG +++ +
Sbjct: 121 ATTIAQSTFNGADYVNANST 140
Score = 57.4 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 64/159 (40%)
Query: 293 TKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANT 352
+I V ++ S + +
Sbjct: 120 MATTIAQSTFNGADYVNANSTVTVVTGISRSSSGSISTTTMSFMQQDLGAIQSALDAVSI 179
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
+ + + Q+ A A+A +G I Q+DF+ + D ++ G+G +VD
Sbjct: 180 ASAGTATQQASALQAAEYQLSAAVASATALGIAEKSIETQKDFLGELTDRLDSGIGSMVD 239
Query: 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+M E+ RL ALQ QQQLA Q+LSI N++ ILSLFR
Sbjct: 240 ANMEDEAARLQALQVQQQLATQSLSIANSAPQNILSLFR 278
>gi|332528571|ref|ZP_08404556.1| flagellin domain protein [Hylemonella gracilis ATCC 19624]
gi|332041977|gb|EGI78318.1| flagellin domain protein [Hylemonella gracilis ATCC 19624]
Length = 76
Score = 74.8 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I TN ++++A + + +L R+SSGLR++ A D+AA +I++ + L+
Sbjct: 3 SVINTNINSLTAQRYQGISDKSLTQAIQRLSSGLRINSAKDDAAGLAISERFTAQIRGLN 62
Query: 62 AVSDAIGLGSSKVD 75
+ G S
Sbjct: 63 QAARNANDGVSLAQ 76
>gi|31096615|gb|AAP44578.1| flagellin [Borrelia sp. LB-M56]
Length = 259
Score = 74.8 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 3/110 (2%)
Query: 41 ADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE 100
+D+AA +A + S LS S + + + +++ V+ +K
Sbjct: 1 SDDAAGMGVAGKLNSQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGN 60
Query: 101 RGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
D SIQ EI QL ++ IA + +N + L + A+
Sbjct: 61 GTYSDSDRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSAAQNVKTAE 110
Score = 48.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 13/131 (9%), Positives = 34/131 (25%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G W + + N A V N ++ +
Sbjct: 127 GAQASWTLRVHVGANQDEAIAVNIYSANVANLFNGEGAQAAPAQEGAQQEGVQAAPAPAA 186
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + +S I+ I+ + +G+ +R+ + +
Sbjct: 187 APVQGGVNSPINVTTAIDANMSLSKIEDAIRMVSDQRANLGAFQNRLESVKSSTDYAIEN 246
Query: 403 VEKGVGRLVDA 413
++ ++ DA
Sbjct: 247 LKASYAQIKDA 257
>gi|218512242|ref|ZP_03509082.1| flagellin C protein [Rhizobium etli 8C-3]
Length = 172
Score = 74.8 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 65/114 (57%), Positives = 79/114 (69%)
Query: 33 SGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIK 92
SG RV AADNAAYWSIA M+SDN ALSAVSDA+GLG++KVD A + M AIDV+S IK
Sbjct: 1 SGYRVEKAADNAAYWSIATTMRSDNKALSAVSDALGLGAAKVDTAYSAMDSAIDVISEIK 60
Query: 93 NKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
KI A E+G D +Q EI QLQ QL IA+ +SF+GENW+ G+ +
Sbjct: 61 AKIVAATEKGVDKTKVQEEIGQLQQQLLSIAQSASFSGENWVAGADGTKSVVST 114
>gi|203287641|ref|YP_002222656.1| flagellar hook-associated protein 3 [Borrelia recurrentis A1]
gi|201084861|gb|ACH94435.1| flagellar hook-associated protein 3 [Borrelia recurrentis A1]
Length = 424
Score = 74.8 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/404 (9%), Positives = 111/404 (27%), Gaps = 29/404 (7%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G R+++ ++ + + + S+ L+ S I K+ + + ++++ K
Sbjct: 36 GKRITNLRNDPTGVTHSIRLDSNIFKLNTYSHNINNARGKLRYVEGYLQSLSNILTRAKE 95
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
G + + ++ + L D+ ++ G + G+ + +
Sbjct: 96 IAIKGANGTYGTDDKKIIAKEINAILEDVLAIANAKGADGYSMFAGTK---VDAEAFKAT 152
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
K+ + + + S TE + +
Sbjct: 153 RAKKINKLTQDRAETQIIKIDYNGNQSEQTTEICNGIYISTNYPGSELFFSQNQYITSSK 212
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + A A IA I A+ + + + +
Sbjct: 213 NVDNFVVQENTKIYIDNVEIVLTAGDTAADIIAKINESSAPVEASLDNILNSIIINTTTP 272
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
G++ + + S N D+ D+ ++ +
Sbjct: 273 HQMWITEEEGSTVLTDLGILNQNNDSKEPPYNIANNAEIRNRTIFDSLIDLRDNLEENRE 332
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + ++ ID + + +G+ +R+ +
Sbjct: 333 GLIGSRN------------------------LAEIDESLSKILSTLADLGTKENRLEVSY 368
Query: 394 DFIKLMRDAVEKGVGRLVDADMASEST--RLSALQTQQQLAVQA 435
+ ++ + + D D+ T +++L Q L V A
Sbjct: 369 ARLSKEIMDMKDDMVQYTDLDVTKAITDLNMTSLAYQVSLGVSA 412
>gi|262283895|gb|ACY40757.1| FlaD [Rhizobium leguminosarum bv. viciae]
Length = 320
Score = 74.8 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 59/139 (42%), Positives = 87/139 (62%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT +T+ +A++A LR IN Q +VSSG R+ AAD+A+YWS+A +M+SD+ L
Sbjct: 1 MTVKITSAAAVNALAVLRSINKEASQTQQQVSSGYRIETAADDASYWSVATVMRSDSTNL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
V DA+GLG++KVD M+ AID++ I+ K+ + E GTD I +EI++ + QL+
Sbjct: 61 GTVGDALGLGAAKVDATYTAMNSAIDLIGEIRAKLVSAREPGTDKDKINAEISEYKEQLQ 120
Query: 121 DIARGSSFNGENWLRTDLG 139
I +SF GENWL
Sbjct: 121 TIVESTSFAGENWLLNGDT 139
Score = 56.7 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 58/113 (51%)
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
+ T D + +M+ D + T A IG + +RI Q D+
Sbjct: 207 NANSTTPATGTEIAIDNNTTDAQLTDMLDVTDALLSSLTTTAASIGVLKTRIDDQIDYTA 266
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ D+++K VG LVD DM S R A++TQ+Q+AV+A+SI+N + ++IL L
Sbjct: 267 DLADSIDKSVGALVDTDMDEASIRQKAIETQKQMAVEAISILNTAASKILILL 319
>gi|160901876|ref|YP_001567457.1| flagellar hook-associated protein 3 [Petrotoga mobilis SJ95]
gi|160359520|gb|ABX31134.1| flagellar hook-associated protein 3 [Petrotoga mobilis SJ95]
Length = 298
Score = 74.8 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/287 (10%), Positives = 69/287 (24%), Gaps = 3/287 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + ++D+ + +++SG +V +DNAA + + S +
Sbjct: 3 ITENLLSSRTLNDIQDVLRKYSDLNSQLTSGKKVRYPSDNAAVATRISNLDSRLREIERY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQLR 120
+ + V++ + + + +K G + +I E+ ++ +QL
Sbjct: 63 KTNVETAQNYVNMYDTALQEVSSIYLRVKELAVRGANDTLTKEDKVAISEELNKINTQLV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA + I I ++ D E
Sbjct: 123 SIANTEISGNYVFGGAKNNQKVVEIDSEGNFKIIMPPEANIRQKISVGGQDIEYGKTVYD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T+ + K D + + L +
Sbjct: 183 AFVTDYGASIFAIVKRLSNAIEAGDYTSLQSEMENVEEIQNNVLKNLTEVGATQRVLEMT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
+ + + + +I
Sbjct: 243 SNRMEEFKSFSTEFLSNEADADMAQVVMELATQQNVLQAALKAAGNI 289
Score = 42.8 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 34/86 (39%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
+N + +++ + ++ ++G+ + + + ++ + + +
Sbjct: 200 SNAIEAGDYTSLQSEMENVEEIQNNVLKNLTEVGATQRVLEMTSNRMEEFKSFSTEFLSN 259
Query: 410 LVDADMASESTRLSALQTQQQLAVQA 435
DADMA L+ Q Q A++A
Sbjct: 260 EADADMAQVVMELATQQNVLQAALKA 285
>gi|13560140|emb|CAC36218.1| flagelline [Treponema socranskii]
Length = 220
Score = 74.8 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 3/158 (1%)
Query: 47 WSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGT 103
++++ ++S L+ I G S + + + + D++ ++
Sbjct: 1 LAVSEKLRSQIRGLNQAGRNIENGVSFLQTTEGYLQETTDILQRVRELAIQASNGIYSDE 60
Query: 104 DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
D IQ E++QL S++ +A + FNG N L G + D N +V I
Sbjct: 61 DRMQIQVEVSQLVSEVDRVASQAQFNGMNMLTGSFGRWDGAKTMQFHVGANVDQNVRVYI 120
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
T+ + + L V+
Sbjct: 121 GTMTATALGLKNANGDNEQISIATPDLANATLGAVDSA 158
Score = 74.0 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 13/140 (9%), Positives = 39/140 (27%)
Query: 294 KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD 353
+ + + + +D + + ++ N
Sbjct: 81 SQAQFNGMNMLTGSFGRWDGAKTMQFHVGANVDQNVRVYIGTMTATALGLKNANGDNEQI 140
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ + +D+ + T +G+ +R + + + + ++ R+ D
Sbjct: 141 SIATPDLANATLGAVDSALLRVTKQRADLGAYQNRFEMASKGVNVAAENMQAAESRIRDT 200
Query: 414 DMASESTRLSALQTQQQLAV 433
DMA+E + Q
Sbjct: 201 DMAAEIVDYTKNSILTQSGT 220
>gi|148976401|ref|ZP_01813107.1| flagellar hook-associated protein L [Vibrionales bacterium SWAT-3]
gi|145964224|gb|EDK29480.1| flagellar hook-associated protein L [Vibrionales bacterium SWAT-3]
Length = 396
Score = 74.4 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/422 (9%), Positives = 104/422 (24%), Gaps = 53/422 (12%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
LR + Q +++SG ++ +D+ Q + + L DAI L ++
Sbjct: 15 QNDLRRQENKVHHNQAQLASGKKLQSPSDDPLATHYLQNIGQQSEQLKQYVDAITLVRNR 74
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
++ + ++ + K + + + + +++++A F
Sbjct: 75 LEHHEVMIANSEGFADEAKRTVMEMINGALSPEDR----LAKKREIQELANN--FLYLAN 128
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
+ + G+ T + K F RD+ G V
Sbjct: 129 SQDESGNYTFAGTKPKSQPFFRDNEGTVTYQ----------------------------- 159
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
+ V + + + + + +
Sbjct: 160 -------GDDYQRKMRVASSFEMAMNDPGSKLFMEIDNPFGDYEPQYELEPASELLLGRA 212
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
A +T + + + + G I +
Sbjct: 213 TNSAEDGSTYKVTFVDMQTGKFAYQLEKDGAVVAAEDFDPATGIVYEGLNIQFKGQVTKG 272
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
++ T + + + +M
Sbjct: 273 DSITLEPRETFSIFDTFKEAAEQVENPVS-----------DASATAKLHQMTEEFHAAFI 321
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
T A +G+ S + +QE + + ++ K D D + + Q +
Sbjct: 322 HLTKARTDVGARLSTLDIQEQQHEDFKLSLAKAKSNFEDLDYSKAIIEFNENSRALQASQ 381
Query: 434 QA 435
QA
Sbjct: 382 QA 383
>gi|205356844|ref|ZP_03223596.1| flagellin [Campylobacter jejuni subsp. jejuni CG8421]
gi|205345282|gb|EDZ31933.1| flagellin [Campylobacter jejuni subsp. jejuni CG8421]
Length = 80
Score = 74.4 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 31/79 (39%)
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
IGS+ +++ + + I + + V+ + D D A+ES S Q
Sbjct: 2 TNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFAAESANFSKYNILAQSG 61
Query: 433 VQALSIVNNSTARILSLFR 451
A+S N +L L +
Sbjct: 62 SYAMSQANAVQQNVLKLLQ 80
>gi|9438183|gb|AAF87586.1|AF283285_1 flagellin [Ralstonia solanacearum]
Length = 273
Score = 74.4 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 51/139 (36%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + + V ++ + + IDT +
Sbjct: 135 NKLFDGSVASTTFQYGQNAATDVATVTNVDMSAYGTLAGTSVTSVANATAAQAAIDTDLT 194
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
AA +G+ S + + + A+ LVD D ASE++ ++ QQ
Sbjct: 195 SLKAARASLGAQQSGLASTINTLTSNNTALSAAKSTLVDTDYASETSNMTRQNILQQAGT 254
Query: 434 QALSIVNNSTARILSLFRG 452
L+ N++ IL+L +G
Sbjct: 255 AMLAQANSAPNNILNLLKG 273
Score = 67.1 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/264 (12%), Positives = 85/264 (32%), Gaps = 3/264 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN S++ Q L L+ R+S+G+RV+ A D+AA ++ A + + A +
Sbjct: 3 LSLNTNISSLQTQQALSTSQSALQKSLQRLSTGMRVNSAQDDAAAYASASSLTTTLNAQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
+S + A + + + + + ++ D ++ E QL +
Sbjct: 63 QGIQNANGANSYLQTADSYLGQVENNLQRMRQLAVEANNGGLSAADQTNLDKEYQQLATA 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
++I +++NG + S+T ++ N + +V
Sbjct: 123 NKNIETNANYNGNKLFDGSVASTTFQYGQNAATDVATVTNVDMSAYGTLAGTSVTSVANA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ L + ++ + + +T + +
Sbjct: 183 TAAQAAIDTDLTSLKAARASLGAQQSGLASTINTLTSNNTALSAAKSTLVDTDYASETSN 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTT 262
+ + + A +
Sbjct: 243 MTRQNILQQAGTAMLAQANSAPNN 266
>gi|13560142|emb|CAC36219.1| flagelline [Treponema socranskii]
Length = 220
Score = 74.4 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 55/158 (34%), Gaps = 3/158 (1%)
Query: 47 WSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGT 103
++++ ++S L+ I G S + + + + D++ ++ +
Sbjct: 1 LAVSEKLRSQIRGLNQAGRNIENGVSFLQTTEGYLQETTDILQRVRELAIQAADGIYSDE 60
Query: 104 DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
D IQ E++QL S++ +A + FNG N L G + D N +V I
Sbjct: 61 DRMQIQVEVSQLVSEVDRVASQAQFNGMNMLTGSFGRWDGAKTMQFHVGANVDQNVRVYI 120
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
T+ + + L V+
Sbjct: 121 GTMTATALGLKNADGDNEQISIATPDLANATLGAVDSA 158
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 13/140 (9%), Positives = 39/140 (27%)
Query: 294 KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD 353
+ + + + +D + + ++ N
Sbjct: 81 SQAQFNGMNMLTGSFGRWDGAKTMQFHVGANVDQNVRVYIGTMTATALGLKNADGDNEQI 140
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ + +D+ + T +G+ +R + + + + ++ R+ +
Sbjct: 141 SIATPDLANATLGAVDSALLRVTKQRADLGAYQNRFEMASKGVNVAAENMQAAESRIKET 200
Query: 414 DMASESTRLSALQTQQQLAV 433
DMASE + Q
Sbjct: 201 DMASEIVDYTKNSILTQSGT 220
>gi|308050017|ref|YP_003913583.1| flagellar hook-associated protein 3 [Ferrimonas balearica DSM 9799]
gi|307632207|gb|ADN76509.1| flagellar hook-associated protein 3 [Ferrimonas balearica DSM 9799]
Length = 304
Score = 74.4 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 16/166 (9%), Positives = 53/166 (31%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
++ N V ++SSG +++ +D+ + ++ + +L+ I
Sbjct: 13 LNSMQMNQANYGKVLQQMSSGKKLNVPSDDPLGAVQSLSLQREQASLNQYMTNISSLRMS 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
+ +++ + +V+ +++ G + + +L+ + + E
Sbjct: 73 LSRSESTLDNMNNVLYRVRDLSLQGGNGALTHEDRKGIAAELRVLQDSLVEHVNAKDEKG 132
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
G+ + + S G + + D+
Sbjct: 133 KYIYSGNEVDTPPVAQDASGNWVYQGDLSQRDVPVGEGNWIPGNDT 178
Score = 40.1 bits (91), Expect = 0.69, Method: Composition-based stats.
Identities = 37/302 (12%), Positives = 76/302 (25%), Gaps = 6/302 (1%)
Query: 150 IGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ R + +Q+ +Y + + + L Q + ++
Sbjct: 5 MQQMHRLNLNSMQMNQANYGKVLQQMSSGKKLNVPSDDPLGAVQSLSLQREQASLNQYMT 64
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
+ ++ L Q A A +
Sbjct: 65 NISSLRMSLSRSESTLDNMNNVLYRVRDLSLQGGNGALTHEDRKGIAAELRVLQDSLVEH 124
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ YI GN S S ++ T
Sbjct: 125 VNAKDEKGKYIYSGNEVDTPPVAQDASGNWVYQGDLSQRDVPVGEGNWIPGNDTAGAIFF 184
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAY-NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
++I +G S + AM++ + ID + ++G
Sbjct: 185 AGGEDIFNGLSEWIDVLEDPTLVPGDPAFDAAMDKAMRTIDNTMASIGQTMTELGGRQQG 244
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ L E + + ++ +G + + D S L+ Q Q+ +N LS
Sbjct: 245 MDLLETAHQDIGMFNQELIGEIENLDYGEASLSLATYLMALQATQQSYVKINQ-----LS 299
Query: 449 LF 450
LF
Sbjct: 300 LF 301
>gi|91201246|emb|CAJ74306.1| similar to flagellar hook-associated protein FlgL [Candidatus
Kuenenia stuttgartiensis]
Length = 305
Score = 74.4 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 60/169 (35%), Gaps = 3/169 (1%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
+ + ++ ++ +Q+++SSG +++ A+D+ KS L DAI
Sbjct: 11 SNTTLSNIQLNYKKMQEIQEKLSSGKQINRASDDPVSTRKLLGFKSGENELQQYLDAIKH 70
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGS 126
K++ + D+M I+ K + ++ I SEI +L + + +
Sbjct: 71 ARDKINFIFDALENIQDIMVKIQTKTVQAADGTLGDSERGIIASEIDELMETIIQFSNIT 130
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
NG + A G I TI Y + T
Sbjct: 131 DSNGRYLFSGTKTLTAPFRATRDSGGEITGVKYDGNNETIQYQIGSNTF 179
Score = 42.4 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+T K G+ R+ + E+ ++ + A+++ + DAD+AS T L
Sbjct: 221 KNFETANNNVLTEITKFGAKVDRLAITENRVENSKIALKELISYTEDADLASLITELKNQ 280
Query: 426 QTQQQLAVQ 434
+ Q A+Q
Sbjct: 281 ENVLQAALQ 289
>gi|313897102|ref|ZP_07830649.1| hypothetical protein HMPREF9162_0260 [Selenomonas sp. oral taxon
137 str. F0430]
gi|320530513|ref|ZP_08031571.1| hypothetical protein HMPREF9555_01675 [Selenomonas artemidis F0399]
gi|312974549|gb|EFR40017.1| hypothetical protein HMPREF9162_0260 [Selenomonas sp. oral taxon
137 str. F0430]
gi|320137346|gb|EFW29270.1| hypothetical protein HMPREF9555_01675 [Selenomonas artemidis F0399]
Length = 448
Score = 74.4 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 56/437 (12%), Positives = 130/437 (29%), Gaps = 12/437 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ +++S + L ++ YN + ++ G ++ +DN+ +S G
Sbjct: 5 VSSDYSVQRYQKDLNELEYNKAKLMEQ-GDGSKLHRPSDNSVDYSRYLRYDISEGENERY 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK-----SIQSEITQLQSQ 118
++ G S ++ + +S D+ T K K D K +I E+ Q
Sbjct: 64 QSSVKAGLSWMNATQNALSGMEDIQKTFKAKTIQAANDDKDEKGGDWPAIAREMMAGIQQ 123
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ + + + + S+ S T + D
Sbjct: 124 IVSLGNTQLGDRYIFSGQADLTQPFSMTDSSHKVDRGLTKTLDDRQTAFFNGVSNEKSGD 183
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
G +++ + + + I+ + + + A
Sbjct: 184 FLHQMLALQGDDGKDYYMNTLTGDIYTKEFVQEGYKDVIAKGRSTVDPATDRVGNIGGAL 243
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
T + A TTS T G + ++ + ++ + +R +
Sbjct: 244 NISQHFKNTGEIKTDAGAGTNWTTSATVGGSTVNMKFATIKQQIATYNGDMRYISMVKQN 303
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
T TV K G + D + + V R ++
Sbjct: 304 GSTEPTADTVNKTGRDLFGRDLFDDGNSGNSASGTAMLNNMLTVYEQTNRSNPHWISSDG 363
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
V+ D + A + G+ S D + ++ + K + + D+A+
Sbjct: 364 ------VTLADAANQVTLQAHTETGARSRLYTDMTDILTNHKENITKDITDVSSTDVAAL 417
Query: 419 STRLSALQTQQQLAVQA 435
+T++ QT +++
Sbjct: 418 ATKMMQQQTLMSMSLSM 434
>gi|332298484|ref|YP_004440406.1| flagellar hook-associated protein 3 [Treponema brennaborense DSM
12168]
gi|332181587|gb|AEE17275.1| flagellar hook-associated protein 3 [Treponema brennaborense DSM
12168]
Length = 414
Score = 74.4 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/433 (10%), Positives = 106/433 (24%), Gaps = 44/433 (10%)
Query: 8 HSAMSA---SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
SAM+ LR L +++ S R+ ++ +S G +
Sbjct: 5 SSAMTNSDVQGNLRIQESRLNKANNQMGSQQRLQSLREDPLAAGHLVRYQSYLGRVQTFE 64
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLRD 121
+ + + + M++++DVM I+ G D K++ SE+ +L +L
Sbjct: 65 KNAQTLTDRFSLTEGYMNQSLDVMHRIRELAVTGATGTNTPDDLKNMASEVDELLKELVQ 124
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
A + +G + + TA + + + + V +
Sbjct: 125 NANATGPDGTSLFAGTRTNRTAFDIEMGAVPGSAEPKIAAVRYNGNIDGNKIEVDERAYL 184
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+
Sbjct: 185 EV--------------------------------------ESAGNKVFWSEPQRLFGSRD 206
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A + + + + + + + + S V T
Sbjct: 207 ASSYRAGADSVISVDGKQIQVAAGDNVYALAAKINVSGAAVRASVDPVTRGLNLQTTDSR 266
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ + +++ SG S+ I + +++
Sbjct: 267 QLWLEDASGSVLNDLGLIKDASQRPPYNLGDSTRLSGGSLFDSVIALRDAMLSGDQETIG 326
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ +D + + G+ R V + R D D T
Sbjct: 327 GRVLGSLDGAVNNLVTRLAQSGAQYERAVQNITRNSATALNVTSQISREGDLDFTKAVTD 386
Query: 422 LSALQTQQQLAVQ 434
+ L+ Q +
Sbjct: 387 MKMLEYVHQATLS 399
>gi|126738493|ref|ZP_01754198.1| flagellin C protein [Roseobacter sp. SK209-2-6]
gi|126720292|gb|EBA16998.1| flagellin C protein [Roseobacter sp. SK209-2-6]
Length = 279
Score = 74.4 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 52/142 (36%), Positives = 80/142 (56%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN AM+A Q L I E ++VS+G +S A NAA W+I+QIM++D SA+
Sbjct: 3 IPTNGGAMAALQMLGGIIPAKENTLNQVSTGKSISSANHNAAIWAISQIMEADVSGFSAL 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
SD++ LG + + +A AG A D++ ++ G + D I++++ L SQL +
Sbjct: 63 SDSLSLGEATLSVASAGAEFATDILGEMRQLAILGTGQNVDHSKIETQMQHLTSQLNSVI 122
Query: 124 RGSSFNGENWLRTDLGSSTASI 145
S FNG N L+TD+ + AS
Sbjct: 123 DSSQFNGVNLLKTDIDGTGASS 144
Score = 58.2 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
N A + + + I+ ++ A A +G+ + ++ Q F+ + DA G+ L
Sbjct: 181 NRTAITDGASALTALQEIEGFMQYAIDGAAALGASTRQVSDQNQFVGQLADATRLGISNL 240
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
D +M TRL A++TQ QL + +LSI N+ +L L
Sbjct: 241 TDTNMEESITRLMAMETQHQLGLISLSIANSMPNALLKL 279
>gi|323495370|ref|ZP_08100447.1| flagellar hook-associated protein FlgL [Vibrio brasiliensis LMG
20546]
gi|323310293|gb|EGA63480.1| flagellar hook-associated protein FlgL [Vibrio brasiliensis LMG
20546]
Length = 397
Score = 74.4 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 50/435 (11%), Positives = 110/435 (25%), Gaps = 52/435 (11%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I + H+ S LR + Q +++SG ++ A+D+ Q + L
Sbjct: 2 MNRISSFHNYQSVQNDLRRSEAKVHHNQAQLASGKKLMKASDDPLATHYIQNIGQQKEQL 61
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+DAI L ++++ + +S A + K + + + + ++
Sbjct: 62 RQFTDAITLTRNRLEHHEVIISNAEEFADEAKRTVMEMINGALSPEDR----LAKRREIE 117
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+I+ F ++ + G+ + K F R
Sbjct: 118 EISNN--FLNLVNVQDESGNYIFAGTKPKNQPFFR------------------------- 150
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
DRN + + I+ KL ++
Sbjct: 151 ----------DRNGDVVYAGDDYQRKMKISNSLEMPINDPGSKLFMEIDNPFGDFEPKYN 200
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ ++ + P R G+ I +
Sbjct: 201 LKDASELLLERAINIDPDDQSSYKVTFVDMPEGKYGYQLERDGSVVKADTFDPAEGIQYE 260
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
++ T S S+ + T +
Sbjct: 261 GVRIQVKGQITKGDEIELEPRRTFSVFETFQDAMELSRGSVSDSSNTAQLHQI----TQE 316
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ +G+ + + +QE+ + + K D D A
Sbjct: 317 FHAAFIHLNKA-------RTDVGARLNTLDIQEEQHDDFKMTLAKSKSNFEDLDYAEAII 369
Query: 421 RLSALQTQQQLAVQA 435
+ Q + QA
Sbjct: 370 EFNENSRALQASQQA 384
>gi|116250493|ref|YP_766331.1| flagellin C [Rhizobium leguminosarum bv. viciae 3841]
gi|115255141|emb|CAK06215.1| flagellin [Rhizobium leguminosarum bv. viciae 3841]
Length = 320
Score = 74.4 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 59/139 (42%), Positives = 87/139 (62%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT +T+ +A++A LR IN Q +VSSG R+ AAD+A+YWS+A +M+SD+ L
Sbjct: 1 MTVKITSAAAVNALAVLRSINKEASQTQQQVSSGYRIETAADDASYWSVATVMRSDSTNL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
V DA+GLG++KVD M+ AID++ I+ K+ + E GTD I +EI++ + QL+
Sbjct: 61 GTVGDALGLGAAKVDATYTAMNSAIDLIGEIRAKLVSAREPGTDKDKINAEISEYKEQLQ 120
Query: 121 DIARGSSFNGENWLRTDLG 139
I +SF GENWL
Sbjct: 121 TIVESTSFAGENWLLNGDT 139
Score = 56.3 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 58/113 (51%)
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
+ T D + +M+ D + T A IG + +RI Q D+
Sbjct: 207 NANSTTPATGTEIAIDNNTTDAQLTDMLDVTDALLSSLTTTAASIGVMKTRIDDQIDYTA 266
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ D+++K VG LVD DM S R A++TQ+Q+AV+A+SI+N + ++IL L
Sbjct: 267 DLADSIDKSVGALVDTDMDEASIRQKAIETQKQMAVEAISILNTAASKILILL 319
>gi|149927805|ref|ZP_01916056.1| flagellar hook-associated protein 3 [Limnobacter sp. MED105]
gi|149823427|gb|EDM82658.1| flagellar hook-associated protein 3 [Limnobacter sp. MED105]
Length = 325
Score = 74.4 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 53/144 (36%), Gaps = 3/144 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN ++ ++ L +Q ++++G RV +D+ S+A K+ + +
Sbjct: 6 ISTNQYFKLSTDRMSKQQTELVKLQGQLATGQRVLKPSDDPLAMSVALGAKAGVKTIDSY 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
I ++++ + A D+M +IK D + I +I +LR
Sbjct: 66 QSNITYVNNQLGQMDVALQSASDIMVSIKEAFLQAGNAALSPADREIIAQDIEGRMEELR 125
Query: 121 DIARGSSFNGENWLRTDLGSSTAS 144
IA + NG
Sbjct: 126 GIANRTDANGYYMFSGTFQDQEPF 149
>gi|148546714|ref|YP_001266816.1| flagellar hook-associated protein FlgL [Pseudomonas putida F1]
gi|148510772|gb|ABQ77632.1| flagellar hook-associated protein 3 [Pseudomonas putida F1]
Length = 521
Score = 74.0 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/202 (12%), Positives = 62/202 (30%), Gaps = 3/202 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ S S + NL+ + S G+RV AD+ + ++ L
Sbjct: 3 ISTSQFYNSNSANYQRSFSNLDKTRQEASDGIRVRRGADDPVGAARLLQLQQQQNMLDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ + + + A++ ++ ++ + + D K+ +E+ L+ QL
Sbjct: 63 TRNVTNVRNALGTAESTLNAIGTILQRVNELAISSGNAGFTDADRKANATELASLEDQLF 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ +G G + + + D GK+ + D +
Sbjct: 123 SLMNSKDESGAYLFSGSKGDKPPYVRNADGTYTYQGDQGKLNLQVGDMLTLAANETGYDA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQV 202
+ + +
Sbjct: 183 FEQALNTSRSETSLVSPATDDG 204
>gi|260767762|ref|ZP_05876697.1| flagellar hook-associated protein FlgL [Vibrio furnissii CIP
102972]
gi|260617271|gb|EEX42455.1| flagellar hook-associated protein FlgL [Vibrio furnissii CIP
102972]
gi|315179406|gb|ADT86320.1| flagellar hook-associated protein FlgL [Vibrio furnissii NCTC
11218]
Length = 397
Score = 74.0 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 56/430 (13%), Positives = 111/430 (25%), Gaps = 54/430 (12%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N+ A+ LR + Q +++SG ++ AADN Q + L D
Sbjct: 9 HNYQAV--QNDLRRQESKIHHNQAQLASGKKLLSAADNPLATHYIQNVSQQQEQLRQYMD 66
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
AI L ++++ + +S A D K + + + + +L +IA
Sbjct: 67 AIVLVRNRLEHQEVIVSSAEDFTDKAKRNVMEMINGSLSPEDRAA----RARELEEIANN 122
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
F ++ + G+ + K F RD+ G V
Sbjct: 123 --FLNLANVQDESGNYIFAGTKPTTQPFFRDNAGNVSY---------------------- 158
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
+ +T KL + +G
Sbjct: 159 -------------GGDDYQRKMKISNSLEMPFNTPGSKLFMEIENPFGDYEPNYQLREGS 205
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
+ + + + + R G K I + +
Sbjct: 206 ELLLEKANNSNPDDDGEYKVTFVDMTNGKFGYQLERNGRVVDTDEFNPKTGIQYEDLTIH 265
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + A+ + +++M
Sbjct: 266 VKGQLTAGDAISLTPRQSFSVFDTFKDA-----------INFSKASVSDASATAKLQQMT 314
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
T A IG+ S + +QE+ + ++ K + D D A +
Sbjct: 315 QEFHTAFIHMNKARTDIGARLSTLDIQEEQHADFKISLAKSKSQFEDLDYAEAVIEFNEN 374
Query: 426 QTQQQLAVQA 435
Q + QA
Sbjct: 375 SRALQASQQA 384
>gi|323697479|ref|ZP_08109391.1| flagellar hook-associated protein 3 [Desulfovibrio sp. ND132]
gi|323457411|gb|EGB13276.1| flagellar hook-associated protein 3 [Desulfovibrio desulfuricans
ND132]
Length = 554
Score = 74.0 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/320 (8%), Positives = 79/320 (24%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
L +L + + + ++ +D+ + + +L S+ I +
Sbjct: 15 NLNTSLTSLMDLNIKAQTQKAINKPSDDPTGMTRILDHRDTLRSLDQYSENISTAKGWLG 74
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
A + + +++ K T D + + +++S + S+ + E+
Sbjct: 75 SADEALMQVSTILTRAKELATQAATGTVDDNNREQISYEMRSLFEQLVSLSNSDFEDNSI 134
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ + K ++ D+ T++ D ++ T G G
Sbjct: 135 FAGHKTDGAAFKQIMWLTTNDETFGNAEFTVNGSSDTTVLVQYYDTTGATPVGGDMNLSD 194
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + D + + K V +
Sbjct: 195 PNLGVRYSIDGGRTWKTDGSMTFVGTEGTLNLPQSGTSVTFHGDATIKVNDPDDVSVSDG 254
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH 315
S + G + I A+ ++ ++ A +
Sbjct: 255 TWMWIRPSAQYVGDDEDAPPLVDSLGPGVNLISAEASGSFLDSNVTIRIDNQSAATMDED 314
Query: 316 YYVDTESTTLDSRKDLPKEI 335
+ +
Sbjct: 315 IHYSYSLDGGINWVTGNVAQ 334
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 43/123 (34%), Gaps = 3/123 (2%)
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
S + + D + + N + ++ ++ + + A
Sbjct: 427 HSNGASNMALSIQGDDEYSMNLFEVMGNLVAFTETNNQTGCQQSLANLVEAQEHIMNAVA 486
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL---AVQALS 437
++G +R+ + + ++ + + + + DAD++ T L+ Q + + +
Sbjct: 487 EVGGRENRLAVSQTIVEGLTLNEKSLLSSIEDADVSELMTELAQQQIVYESVLRSTSMIM 546
Query: 438 IVN 440
+N
Sbjct: 547 QLN 549
>gi|209547939|ref|YP_002279856.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533695|gb|ACI53630.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 320
Score = 74.0 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 60/144 (41%), Positives = 89/144 (61%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT +T+ +A++A LR IN Q +VSSG R+ AAD+A+YWS+A +M+SD+ L
Sbjct: 1 MTVKITSAAAVNALAVLRSINKEASQTQQQVSSGYRIETAADDASYWSVATVMRSDSTNL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ DA+GLG++KVD M+ AID+M I+ K+ A E GTD I +EI + + QL+
Sbjct: 61 GTIGDALGLGAAKVDATYTAMNSAIDLMGQIRAKLVAAREPGTDKDKINAEIDEYKQQLQ 120
Query: 121 DIARGSSFNGENWLRTDLGSSTAS 144
I +SF GENWL ++ +
Sbjct: 121 TIVESTSFAGENWLLNGNTTAPPT 144
Score = 56.7 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 60/113 (53%)
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
+ T D + +M+ D+ + T A IG + +RI Q D+
Sbjct: 207 NANSTTPATGTEIAIDKNTTDAQLTDMLDVTDSLLSSLTTTAASIGVMKTRIDDQIDYTA 266
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ D+++K VG LVD DM S R A++TQ+Q+AV+A+SI+N ++++IL L
Sbjct: 267 DLSDSIDKSVGALVDTDMDEASIRQKAIETQKQMAVEAISILNTASSKILILL 319
>gi|62532942|gb|AAX85858.1| FliC [Escherichia coli]
Length = 364
Score = 74.0 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/365 (9%), Positives = 93/365 (25%), Gaps = 37/365 (10%)
Query: 73 KVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIARGSSFN 129
+ +++ + + ++ SIQ+EITQ ++ ++ + FN
Sbjct: 1 VAQTTEGALNEINNNLQRVRELTVQATNGTNSDSDLSSIQAEITQRLEEIDRVSEQTQFN 60
Query: 130 GENWLRTDLGSSTA---------------------------------SIAKSVIGSFIRD 156
G L + + +I F
Sbjct: 61 GVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQKATGSDLISKFKAT 120
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
+ Y ++ ++ + +T D + K + + + A+
Sbjct: 121 GTDNYDVGGDAYTVNVDSGAVKDTTGNDIFVSAADGSLTTKSDTNIAGTGIDATALAAAA 180
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ + T +G A G+ + + + + +
Sbjct: 181 KNKAQNDKFTFNGVEFTTTTAADGNGNGVYSAEIDGKSVTFTVTDADKKASLITSETVYK 240
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ + + +A T + + + + V Y V + T+
Sbjct: 241 NSAGLYTTTKVDNKAATLSDLDLNAAKKTGSTLVVNGATYDVSADGKTITE-TASGNNKV 299
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
S N DA + + ID + +G++ +R +
Sbjct: 300 MYLSKSEGGSPILVNEDAAKSLQSTTNPLETIDKALAKVDNLRSDLGAVQNRFDSAITNL 359
Query: 397 KLMRD 401
+
Sbjct: 360 GNTVN 364
>gi|328958294|ref|YP_004375680.1| flagellar hook-associated protein FlgL [Carnobacterium sp. 17-4]
gi|328674618|gb|AEB30664.1| flagellar hook-associated protein FlgL [Carnobacterium sp. 17-4]
Length = 299
Score = 74.0 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 50/148 (33%), Gaps = 2/148 (1%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ L N+ Q+++S+ VS +D+ S + + I
Sbjct: 6 LRNLSANTENVMKYQNQLSTLKEVSKPSDDPLKVSKILDLNNSIIQNDQYKKTINDAIQW 65
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI--ARGSSFNGE 131
++ + +S A + IK I S+ Q+ +++S+++ + A ++F G
Sbjct: 66 TNVQDSALSSATKSLQRIKTLIQYSANGTLSSEDRQANKAEIESEIQGVVDAFNTNFGGR 125
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNG 159
+ SV G
Sbjct: 126 YVFAGKNTTEKPFEVTSVDGEITGITYS 153
Score = 44.7 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 46/120 (38%)
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
D R + + G + + ++ + ++ D +I+ + K G
Sbjct: 175 NTDGRNFMNAQNADGSDDLGTFFSEVLTALDEDDTGKLSSLLDRADQEIENVVSNRSKTG 234
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
SI +R++ + + ++ + D D+A + + + ++ Q ++ + + ++
Sbjct: 235 SIFNRLNATLERNDSEKLNLKTMLSENQDIDLAEKYMQFTMEKSAYQASLSMGTQILQTS 294
>gi|170760719|ref|YP_001788055.1| flagellar hook-associated protein 3 [Clostridium botulinum A3 str.
Loch Maree]
gi|169407708|gb|ACA56119.1| flagellar hook-associated protein 3 [Clostridium botulinum A3 str.
Loch Maree]
Length = 320
Score = 74.0 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 63/185 (34%), Gaps = 7/185 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I A S + + NL + +++SG S + + A + + + A
Sbjct: 3 ITNKMMANSFMTDMNNNLENLNRINQQLTSGKNFSKPSHDPAGVIRSMQLYTGIDANKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ I + +D+ + + + I++K+ G E L+ ++ I
Sbjct: 63 NKNISNVINWLDVTDTALDQIGKQLGKIRDKLEEAGNPGFGET----ERKALKDEVNGII 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
S + T G S + +G + +IDY ++ LD + D
Sbjct: 119 ASMS---QTLNTTFDGKYIFSGTRVTGKPTGIQKDGTTKNNSIDYVNRDGSMPLDPAGDE 175
Query: 184 TERYG 188
++
Sbjct: 176 YKQMN 180
Score = 57.1 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 25/62 (40%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ ID + +G+ +R+ ++ K + + + + D D A ++ +
Sbjct: 236 LGNIDKALDNVLRIRAGVGAKQNRMDAAKEMNKETNINMTEILSNIEDVDYAEKNMEFAV 295
Query: 425 LQ 426
LQ
Sbjct: 296 LQ 297
>gi|13560158|emb|CAC36201.1| flagelline [Treponema amylovorum]
Length = 223
Score = 74.0 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/166 (15%), Positives = 54/166 (32%), Gaps = 3/166 (1%)
Query: 47 WSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGT 103
++++ M++ L S G S + + + + D+M I+
Sbjct: 1 LAVSEKMRAQIRGLHQASQNASNGISFIQTTEGYLQETTDIMQRIRELAIQSANGIYSDE 60
Query: 104 DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
D IQ E++ L S++ IA + FNG N L T + F N ++
Sbjct: 61 DRMQIQVEVSALVSEVDRIASSAQFNGMNMLTGRFAMPTGENVVTGSMWFHIGANMDQRM 120
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ + + T+ + + + ++
Sbjct: 121 QIYIGTMSSTALGIREIGTETKISLQTPEDANRVIGIVDAGLMKIN 166
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 27/77 (35%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ +D + +G+ +R+ + + + ++ R+ D +MA
Sbjct: 147 TPEDANRVIGIVDAGLMKINKQRADLGAYQNRMEYAVKGLDVSAENLQAAESRIRDTNMA 206
Query: 417 SESTRLSALQTQQQLAV 433
S+ + QQ
Sbjct: 207 SQMVEFTKNSVLQQAGT 223
>gi|300693356|ref|YP_003749329.1| flagellar filament structural protein (flagellin protein)
[Ralstonia solanacearum PSI07]
gi|299075393|emb|CBJ34688.1| flagellar filament structural protein (flagellin protein)
[Ralstonia solanacearum PSI07]
Length = 273
Score = 74.0 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 51/139 (36%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + + V ++ + + IDT +
Sbjct: 135 NKLFDGSVASTTFQYGQNAATDAATVTNVNMSTFGTLAGTSVTSAANATAAQAAIDTDLT 194
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
AA +G+ S + + + A+ LVD D A+E++ ++ QQ
Sbjct: 195 SLKAARASLGAQQSGLTSTINTLTSNNTALSAAKSTLVDTDYAAETSNMTRQNILQQAGT 254
Query: 434 QALSIVNNSTARILSLFRG 452
L+ N++ IL+L +G
Sbjct: 255 AMLAQANSAPNSILNLLKG 273
Score = 66.3 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/264 (12%), Positives = 85/264 (32%), Gaps = 3/264 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN S++ Q L L+ R+S+G+RV+ A D+AA ++ A + + A +
Sbjct: 3 LSLNTNISSLQTQQALSQSQSALQKSLQRLSTGMRVNSAQDDAAAYASASSLTTTLNAQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
+S + A + + + + + ++ D ++ E QL +
Sbjct: 63 QGIQNANGANSYLQTADSYLGQVENNLQRMRQLAVESNNGGLSAADQTNLDKEYQQLATA 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
++I +++NG + S+T ++ N + +
Sbjct: 123 NKNIETNANYNGNKLFDGSVASTTFQYGQNAATDAATVTNVNMSTFGTLAGTSVTSAANA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ L + ++ + + +T A +
Sbjct: 183 TAAQAAIDTDLTSLKAARASLGAQQSGLTSTINTLTSNNTALSAAKSTLVDTDYAAETSN 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTT 262
+ + + A + +
Sbjct: 243 MTRQNILQQAGTAMLAQANSAPNS 266
>gi|229149962|ref|ZP_04278190.1| Flagellin [Bacillus cereus m1550]
gi|228633643|gb|EEK90244.1| Flagellin [Bacillus cereus m1550]
Length = 74
Score = 74.0 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 29/73 (39%)
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
GS +R+ + + + ++ DADMA E + ++ + + + LS
Sbjct: 2 RATFGSQLNRLDHNLNNVNSQATNMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQ 61
Query: 439 VNNSTARILSLFR 451
N + + L +
Sbjct: 62 ANQTPQMVSKLLQ 74
>gi|304407694|ref|ZP_07389345.1| flagellar hook-associated protein 3 [Paenibacillus curdlanolyticus
YK9]
gi|304343177|gb|EFM09020.1| flagellar hook-associated protein 3 [Paenibacillus curdlanolyticus
YK9]
Length = 302
Score = 74.0 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 8/103 (7%), Positives = 39/103 (37%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ + ++ Q+ +S+G +++ +D+ + + +S+ I S++
Sbjct: 16 RNINHNLTRMQGQQNDLSTGRKLNKPSDDPVGITYSLRYRSELSMNEQFDKNIAQAKSQL 75
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQS 117
+ + + D++ ++ + ++ + ++
Sbjct: 76 EHTDTVVGQLNDIVQRVQELSVQALNGTNPQSALDAIAVEVSQ 118
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 9/81 (11%), Positives = 29/81 (35%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
++ + T+ ++G+ +R+ L + ++ + + + D
Sbjct: 207 PAGNMANLQTAYQNLSTRYDKIINLRSEVGARVNRVDLIDQRLQDLNFNLTSLQSKTEDT 266
Query: 414 DMASESTRLSALQTQQQLAVQ 434
DMA + + + Q ++
Sbjct: 267 DMAETIMKYNQEEAVYQASLS 287
>gi|84502368|ref|ZP_01000504.1| flagellin family protein [Oceanicola batsensis HTCC2597]
gi|84389180|gb|EAQ01977.1| flagellin family protein [Oceanicola batsensis HTCC2597]
Length = 278
Score = 74.0 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/140 (31%), Positives = 78/140 (55%), Gaps = 1/140 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SILTNHSAM+A LR IN +L Q+R+S+GL ++ DNAAY+SI++ M D+G
Sbjct: 1 MSSILTNHSAMTALSTLRQINGDLASTQNRISTGLSIASGKDNAAYFSISKTMAGDSGMF 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD-SKSIQSEITQLQSQL 119
A+ + + L + V A+ G +D+ ++ + +Q+E+ +L +++
Sbjct: 61 KAIDETLTLQKNAVSTARLGAETLVDLAQDFVERVAFAQGGTEEVRVDVQAELDELVARM 120
Query: 120 RDIARGSSFNGENWLRTDLG 139
S+FNG +++ +
Sbjct: 121 ATTIAQSTFNGADYVNANST 140
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 63/159 (39%)
Query: 293 TKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANT 352
+I V ++ S +
Sbjct: 120 MATTIAQSTFNGADYVNANSTVTVVTGISRSSSGSISTTTMSFMQQDLGAIQTALSVIDL 179
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
+ A + + Q+ A AAA +G I Q+DF+ + D ++ G+G +VD
Sbjct: 180 TGADSAGAQATALQTAEAQLSAAVAAATSLGIAERSIETQKDFLGELTDRLDSGIGSMVD 239
Query: 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
A+M E+ RL ALQ QQQLA Q+LSI N + ILSLFR
Sbjct: 240 ANMEDEAARLQALQVQQQLATQSLSIANAAPQNILSLFR 278
>gi|262092988|gb|ACY25862.1| FliC [Ralstonia solanacearum]
Length = 180
Score = 74.0 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 67/178 (37%), Gaps = 3/178 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN S++ Q L L+ R+S+GLRV+ A D++A ++ + + + + +
Sbjct: 3 LSLNTNISSLQTQQALSQSQSALQKSLQRLSTGLRVNSAQDDSAAYAASSSLTTTLNSQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
+S + A + + + + + ++ D ++ E QL +
Sbjct: 63 QGIQNANGANSYLQTADSYLGQVENNLQRMRQLAVESNNGGLSAADQTNLDKEYQQLATA 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
++I +++NG + S+T ++ N + +
Sbjct: 123 NKNIETNANYNGNKLFDGSVASTTFQYGQNAATDVTTVTNVNMSTFGTLTGTSVTSAA 180
>gi|89069463|ref|ZP_01156813.1| hypothetical protein OG2516_04014 [Oceanicola granulosus HTCC2516]
gi|89044944|gb|EAR51031.1| hypothetical protein OG2516_04014 [Oceanicola granulosus HTCC2516]
Length = 269
Score = 74.0 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 76/152 (50%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M+A LR IN NL QDR+S+GL+V+ A DNA+Y+SI+ + S++G A+++ + L
Sbjct: 1 MNALSTLRSINNNLNQTQDRISTGLKVNSAKDNASYFSISTTLSSESGMNKAINEGLTLS 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ V A+ G +D+ +++ E G D +Q E+ + +Q++ R S FNG
Sbjct: 61 KNSVSTARLGAETFVDLAKEFIDRVAFAQETGVDHAKVQDELGSIVAQMKTTIRQSDFNG 120
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
EN L + ++ +
Sbjct: 121 ENLLSAAGAGAKTIVSGVTGVGGATVSTSTIT 152
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 54/95 (56%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ ++ + + + A A +G I Q++F+ + + ++ GVG +VDADM
Sbjct: 175 DAATLKAAMDTASSNLALAIENATALGVAEKAIETQQNFLSELTNRLDSGVGSMVDADME 234
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ RL ALQ QQQLA Q+LSI N + ILSLFR
Sbjct: 235 EEAARLQALQVQQQLATQSLSIANQAPQNILSLFR 269
>gi|329901237|ref|ZP_08272762.1| Flagellar hook-associated protein flgL [Oxalobacteraceae bacterium
IMCC9480]
gi|327549169|gb|EGF33761.1| Flagellar hook-associated protein flgL [Oxalobacteraceae bacterium
IMCC9480]
Length = 413
Score = 73.6 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 54/451 (11%), Positives = 112/451 (24%), Gaps = 48/451 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T +AS ++ D+ Q +++SG R+ AD+ + A + +
Sbjct: 3 ISTAAFYENASTRISDLQSATAQKQTQIASGKRILTPADDPVAAAAALTVSQAIDVNTQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ G + + ++ +S ++ +K A + + + SE+ +L
Sbjct: 63 AANRGTAKDALSLQESVLSNYTTLLQNVKTLTIAAGNGALDDSQRQYMASELAGRYQELM 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA G + + + D G + L +
Sbjct: 123 GIANSRDSTGNYIFGGFKNTLAPFTDVAGTTATYNGDQG-----QRLLQVSTSRQLSIND 177
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + V P + ++ T++ + A
Sbjct: 178 AGSAIFQNIKSGDDSVSVTPDAGNSATATGAISAATVTDATQLKHHNYSIDFTTSAALPP 237
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
P P + + + G + +
Sbjct: 238 VTSYKVFDLTTDPKKTGTPVAAANYTTDPQTIAFDGLQFSASGTPASGDKYNINPNAQ-- 295
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G + LN T N +
Sbjct: 296 -------------------------------SIFKTIGDLITALNTPATGVTGKANLTAS 324
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + I + G+ + ++ + L D D A +
Sbjct: 325 LSAANTNITAALDTTLNVRAAGGARLQELDTLDNEGDNRSLQYASTLSNLQDLDYAKAVS 384
Query: 421 RLSALQTQQQLAVQAL-SIVNNSTARILSLF 450
L+ Q Q A Q+ I N LSLF
Sbjct: 385 ELTQNQLTLQAAQQSFVKIAN------LSLF 409
>gi|73745732|gb|AAZ81990.1| flagellin subunit FliC [Clostridium difficile]
Length = 138
Score = 73.6 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 50/121 (41%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T+ T + + + +T + N D + +LA ++MVS +D +K
Sbjct: 18 TNVAGTTNNNNEIKVALVNTSSIMSKAGITSSTIASLNVDGASGRLAAKQMVSSLDVALK 77
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ K+G+ +R+ ++ + + V R+ D D+ASE LS + Q +
Sbjct: 78 ELNTSRAKLGAQQNRLESTQNNLNNTIENVTAAESRIRDTDVASEMVNLSKMNILVQASQ 137
Query: 434 Q 434
Sbjct: 138 S 138
>gi|86747886|ref|YP_484382.1| flagellin-like [Rhodopseudomonas palustris HaA2]
gi|86570914|gb|ABD05471.1| Flagellin-like [Rhodopseudomonas palustris HaA2]
Length = 274
Score = 73.6 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 3/148 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN +A SA + L + + ++SSG +++ A+D+AA +I+ + SD L
Sbjct: 1 MPVISTNTAANSAVRYLNINSQQMSSSLSKLSSGSKITQASDDAAGLAISTRISSDVTTL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQS 117
+ +S + +A G S D++S +K+ + + + SE T L
Sbjct: 61 QQAATNASQATSILQVADGGASNISDILSRMKSLASQSSSATVTDSSRAYLNSEFTALSD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASI 145
Q+ IA G+ ++G++ L ++ +
Sbjct: 121 QIDSIATGTRYSGQSLLDGSSTFASGAA 148
Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 40/96 (41%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + +D I +AA IG+ SR + I +E + D D
Sbjct: 178 ISTQAGATSALDALDDAIDTVSAARANIGAQESRFNFSASSISTQSQNLESANSAITDVD 237
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ASE +LS+ Q Q AV A S N +L+L
Sbjct: 238 IASEQAKLSSAQVMVQAAVSAESAANKMPQYLLNLL 273
>gi|322382415|ref|ZP_08056318.1| FlgL-like protein [Paenibacillus larvae subsp. larvae B-3650]
gi|321153632|gb|EFX46011.1| FlgL-like protein [Paenibacillus larvae subsp. larvae B-3650]
Length = 270
Score = 73.6 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
++++G +++ +D+ + + +S+ A + S D + ++ D+M
Sbjct: 2 QINTGRKLNKPSDDPIGVTYSVYYRSELTANQQYKKNVEDALSWFDFNDKTIGQSTDIMH 61
Query: 90 TIKNKITAGVERGTDSKSI----QSEITQLQSQLRDIARGS 126
+K T G S + E+ +L+ +L +IA
Sbjct: 62 RLKELATNAASSGGKSPETLNGIKKEVNELKDELLNIANSR 102
Score = 40.9 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 16/196 (8%), Positives = 48/196 (24%), Gaps = 3/196 (1%)
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
+ K + D + + ++ T + + I
Sbjct: 41 DALSWFDFNDKTIGQSTDIMHRLKELATNAASSGGKSPETLNGIKKEVNELKDELLNIAN 100
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
+ + + A D + EI
Sbjct: 101 SRYNGRYVFNGQKVDQMPYTEKTAASAFTDAGKIIYDIGAGVQIDINYSGGEIFGNPEDE 160
Query: 343 TLNITRHANTDAYNEKLAMEEMVS---FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLM 399
E +++ + ++++ + ++G+ +R+ L + +K +
Sbjct: 161 DQIFKVLEEFSQALENEDYDQVNALRGKLESRFDKMQSVRSEVGAKVNRVELTRERLKDL 220
Query: 400 RDAVEKGVGRLVDADM 415
+ + DAD+
Sbjct: 221 ETNLTSLQAKTEDADI 236
>gi|291085834|ref|ZP_06354185.2| flagellin D [Citrobacter youngae ATCC 29220]
gi|291069991|gb|EFE08100.1| flagellin D [Citrobacter youngae ATCC 29220]
Length = 277
Score = 73.6 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 60/147 (40%), Gaps = 3/147 (2%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
+R+++G R++ +AD+AA IA + + + + I ++ + A + + DV
Sbjct: 1 MERLATGNRINSSADDAAGKQIASRLTAQSSGMGVALSNINDATAMLQTADSMFDEMTDV 60
Query: 88 MSTIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ +K+ T + ++Q E +L Q+ D+ + +++ G N S+T
Sbjct: 61 LGRMKDLSTQAANGTYSDEDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFGVSGTSNTGK 120
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLD 171
G + T+D
Sbjct: 121 DGLFQSGVTFQVGAESSDTMTVDISSQ 147
Score = 70.2 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/237 (11%), Positives = 65/237 (27%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ + D + A A + S +
Sbjct: 41 NDATAMLQTADSMFDEMTDVLGRMKDLSTQAANGTYSDEDLQAMQDEYDELGQQMSDMLQ 100
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ T K+ + + ++ L
Sbjct: 101 NTTYGGTNLFGVSGTSNTGKDGLFQSGVTFQVGAESSDTMTVDISSQLDDLVGALGDVSA 160
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
G + + M+ I T + + K+G+ +R++
Sbjct: 161 SFRGDQADATGNAGVSGGSELTTSGSANAMIGTIQTAMDDVSKIQSKLGASINRLNDTAA 220
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ M+D E +G ++D D A+E++ ++ Q Q + L N+ ++ + SL +
Sbjct: 221 NLTSMQDNTEVAIGNIMDTDYATEASNMTQQQVLMQTGITMLKQSNSMSSMVSSLLQ 277
>gi|254420760|ref|ZP_05034484.1| Bacterial flagellin C-terminus domain protein [Brevundimonas sp.
BAL3]
gi|196186937|gb|EDX81913.1| Bacterial flagellin C-terminus domain protein [Brevundimonas sp.
BAL3]
Length = 245
Score = 73.6 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 47/121 (38%), Positives = 65/121 (53%)
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
D S+ TL A + +D I T A +G+ S +
Sbjct: 125 TGATFDGVNSLTTLGADAAITAVNTGSVTAANATTANVDAAITATTTALSTLGTQSKSLG 184
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
Q F+ ++DA+E GVG LVDAD+A ES +L+ALQT+QQL VQALSI N+++ +LSLF
Sbjct: 185 RQITFVNKLQDALEAGVGNLVDADLAKESAKLTALQTKQQLGVQALSIANSASQTLLSLF 244
Query: 451 R 451
R
Sbjct: 245 R 245
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 79/206 (38%), Gaps = 1/206 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SI TN+ A A Q L + LE Q+R+++G++VS A D+ A +SIA ++ +
Sbjct: 1 MASINTNYGAAIALQNLNKTSSELERTQNRINTGMKVSSAKDSGAIFSIATAQRATAASQ 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG-TDSKSIQSEITQLQSQL 119
AV + S D+A A + +K + S +E L +++
Sbjct: 61 DAVRSGLQRTQSITDVALAAGDTITSALEEMKGLAVSIAGSTGNAQTSYLAEYNALGTEI 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
G++F+G N L T + + + + V T+ S
Sbjct: 121 ASAITGATFDGVNSLTTLGADAAITAVNTGSVTAANATTANVDAAITATTTALSTLGTQS 180
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKD 205
+ G + + ++ L D
Sbjct: 181 KSLGRQITFVNKLQDALEAGVGNLVD 206
>gi|168180855|ref|ZP_02615519.1| flagellar hook-associated protein 3 [Clostridium botulinum NCTC
2916]
gi|182668320|gb|EDT80299.1| flagellar hook-associated protein 3 [Clostridium botulinum NCTC
2916]
Length = 320
Score = 73.6 bits (178), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 64/185 (34%), Gaps = 7/185 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I A S + + NL + +++SG S + + A + + + A
Sbjct: 3 ITNKMMANSFMTDMNNNLENLNRINQQLTSGKNFSKPSHDPAGVIRSMQLYTGIDANKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ I + +D+ + + + I++K+ G E L+ ++ I
Sbjct: 63 NKNISNVINWLDVTDTALDQIGKQLGKIRDKLEEAGNPGFGET----ERKALKDEVNGII 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
S ++ T G S + +G + +IDY ++ L+ + D
Sbjct: 119 ASMS---QSLNTTFDGKYIFSGTRVTGKPTGIQKDGTTKNNSIDYVNRDGSMPLNPAGDE 175
Query: 184 TERYG 188
++
Sbjct: 176 YKQMN 180
Score = 57.1 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 25/62 (40%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ ID + +G+ +R+ ++ K + + + + D D A ++ +
Sbjct: 236 LGNIDKALDNVLRIRAGVGAKQNRMDAAKEMNKETNINMTEILSNIEDVDYAEKNMEFAV 295
Query: 425 LQ 426
LQ
Sbjct: 296 LQ 297
>gi|163797030|ref|ZP_02190986.1| flagellin domain protein [alpha proteobacterium BAL199]
gi|159177777|gb|EDP62328.1| flagellin domain protein [alpha proteobacterium BAL199]
Length = 281
Score = 73.6 bits (178), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 3/161 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN +A++A + L N VS+G +V A D+A+ ++IAQ ++ D A A
Sbjct: 4 SINTNPAALTALRNLEAANRQSTTNGQIVSTGQKVRGAIDDASNFAIAQGLRGDIKATGA 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQL 119
+ + +A AG + D+M+ I+ KIT + +Q++ +L +Q
Sbjct: 64 IIQGLNNAKGIARVALAGATSVSDLMADIRKKITEGANEGNTAQQQQILQNDYVELLAQF 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
R + + +N N + ++ + + G
Sbjct: 124 RQVLENAEYNSVNIVIETAIPFNLAVGTVRNVDVLANLEGD 164
Score = 64.4 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 53/97 (54%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ Q + A G++GS ++ LQ ++ DA E+G+G +VDAD
Sbjct: 185 ISTPANALTALTVAQQQEIQISTALGQLGSDLRQLELQTQQLQATLDATEEGLGNIVDAD 244
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA S SALQ +QQL+VQ L I N++ +L LF+
Sbjct: 245 MARASAEQSALQVRQQLSVQTLGIANDAPQVLLGLFQ 281
>gi|241203117|ref|YP_002974213.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240857007|gb|ACS54674.1| flagellin domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 320
Score = 73.2 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 3/276 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT +T+ +A++A LR IN Q +VSSG R+ AAD+A+YWS+A +M+SD+ L
Sbjct: 1 MTVKITSAAAVNALAVLRSINKEASQTQQQVSSGYRIETAADDASYWSVATVMRSDSTNL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ DA+GLG++KVD M AID++ I+ K+ + E G D I +EI++ + QL+
Sbjct: 61 GTIGDALGLGAAKVDATYTAMDSAIDLIGEIRAKLVSAREPGADKDKINAEISEYKEQLQ 120
Query: 121 DIARGSSFNGENWLRTDLG---SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ +SF GENWL + I+ V + + L +
Sbjct: 121 TVVESTSFAGENWLLNGDAAAPPTWQVISGFVRAPTGEYQAQTIDFPSSQTILIDKNNAS 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ ++ + +L + + K A + +
Sbjct: 181 GGLLTKSVDANAINNSGATSRNYYLLNANSTTPATGTEIAIGKNTTDAQLTDMLDVTDSL 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
A+I V + T+ S S SV
Sbjct: 241 LSSLTTTAASIGVMKTRIDDQIDYTANLSDSIDKSV 276
Score = 57.4 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 56/95 (58%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ +M+ D+ + T A IG + +RI Q D+ + D+++K VG LVD DM
Sbjct: 225 TTDAQLTDMLDVTDSLLSSLTTTAASIGVMKTRIDDQIDYTANLSDSIDKSVGALVDTDM 284
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
S R A++TQ+Q+AV+A+SI+N + ++IL L
Sbjct: 285 DEASIRQKAIETQKQMAVEAISILNTAASKILILL 319
>gi|153938132|ref|YP_001392017.1| flagellar hook-associated protein 3 [Clostridium botulinum F str.
Langeland]
gi|152934028|gb|ABS39526.1| flagellar hook-associated protein 3 [Clostridium botulinum F str.
Langeland]
gi|295320032|gb|ADG00410.1| flagellar hook-associated protein 3 [Clostridium botulinum F str.
230613]
Length = 320
Score = 73.2 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 63/185 (34%), Gaps = 7/185 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I A S + + NL + +++SG S + + A + + + A
Sbjct: 3 ITNKMMANSFMTDMNNNLENLNRINQQLTSGKNFSKPSHDPAGVIRSMQLYTGIDANKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ I + +D+ + + + I++K+ G E L+ ++ I
Sbjct: 63 NKNISNVINWLDVTDTALDQIGKQLGKIRDKLEEAGNPGFGET----ERKALKDEVNGII 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
S + T G S + +G + +IDY ++ L+ + D
Sbjct: 119 ASMS---QTLNTTFDGKYIFSGTRVTGKPTGIQKDGTTKNNSIDYVNRDGSMPLNPAGDE 175
Query: 184 TERYG 188
++
Sbjct: 176 YKQMN 180
Score = 57.1 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 25/62 (40%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ ID + +G+ +R+ ++ K + + + + D D A ++ +
Sbjct: 236 LGNIDKALDNVLRIRAGVGAKQNRMDAAKEMNKETNINMTEILSNIEDVDYAEKNMEFAV 295
Query: 425 LQ 426
LQ
Sbjct: 296 LQ 297
>gi|13560144|emb|CAC36222.1| flagelline [Treponema sp. JZC3]
Length = 223
Score = 73.2 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 3/157 (1%)
Query: 47 WSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGT 103
++++ M+S L+ S G + + +A+A + + D+M I+
Sbjct: 1 LAVSEKMRSQIRGLNQASANASNGINFIQVAEAFLQETTDIMQRIRELAVQSSNGIYSAE 60
Query: 104 DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
D IQ E++QL +++ IA + FNG N L T + F N ++
Sbjct: 61 DRMQIQVEVSQLVAEVDRIASSAQFNGMNMLTGRFARETGENVVTGSMWFHIGANMDQRM 120
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
+ + + + D +
Sbjct: 121 RVYVGTMSAAALGIRNVGDEKIMTIETADAANASIGT 157
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 29/81 (35%)
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
A + ID +K +G+ +R+ L I + + ++ R+ D
Sbjct: 143 MTIETADAANASIGTIDEGLKKINKQRADLGAYQNRMELTVVGIDIAAENLQASESRIRD 202
Query: 413 ADMASESTRLSALQTQQQLAV 433
ADMA + + Q +
Sbjct: 203 ADMAKQMVEYTKNQILANTGI 223
>gi|209695755|ref|YP_002263685.1| flagellar hook-associated protein FlgL [Aliivibrio salmonicida
LFI1238]
gi|208009708|emb|CAQ80012.1| flagellar hook-associated protein type 3 FlgL [Aliivibrio
salmonicida LFI1238]
Length = 397
Score = 73.2 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 47/422 (11%), Positives = 111/422 (26%), Gaps = 52/422 (12%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ L +++SG ++ A D+ AQ + L SD I L ++
Sbjct: 15 QNDISRQEVKLHHNSAQLASGKKLLTAGDDPVAALYAQNLTQKKEELRQYSDTIVLARNR 74
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
++ + ++ A K + + + + ++ IA F
Sbjct: 75 LERHEVAIANAEQFADDAKRSVMEMINGSLAPEDRYAHA----QDIKGIADN--FLNLTN 128
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
+ + G+ S KS F R ++G V DY + +
Sbjct: 129 MLDESGNYLFSGTKSKTQPFFRANDGTVTYAGDDYQRNLKVSGSIEVA------------ 176
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
++ KL T + + +G +
Sbjct: 177 -----------------------VNDAGNKLFTEIKNPFGDYDPQYALQEGSELLLSKAK 213
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+T + S + + + + G+ + I +
Sbjct: 214 NMDYTDTSTYQVAFSAADNGQYNYQLSQDGSVVKSAQFNPAEGIKYEGVDIQVRGQLKAG 273
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
++ + T + + + + ++
Sbjct: 274 DAITLEPKKTIS-----------IFDAFKKAQELSMKDVSDASSTAELHQVTEEFHAAFI 322
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ A ++G+ + + QE + + K + + D D A + Q +
Sbjct: 323 HLSQARAEVGTRQNTLDQQESQHQDFDLTISKSLSSIEDLDYAQAVIEFNENTRALQASQ 382
Query: 434 QA 435
QA
Sbjct: 383 QA 384
>gi|312879809|ref|ZP_07739609.1| flagellin domain protein [Aminomonas paucivorans DSM 12260]
gi|310783100|gb|EFQ23498.1| flagellin domain protein [Aminomonas paucivorans DSM 12260]
Length = 1021
Score = 73.2 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/360 (8%), Positives = 81/360 (22%), Gaps = 2/360 (0%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+++ + +Q ++++ + S +DN + + M + I G +
Sbjct: 15 LTDMQNNLARMLEIQHQIATQKKFSKPSDNPIDVTRSLAMGTTITENVQYQRNIDDGVTW 74
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL--QSQLRDIARGSSFNGE 131
+ + ++ +V ++ + G + + QL + A G
Sbjct: 75 LKNTETSFNQITNVYQQVRQLAIYAGDGGLADVDMGAIAEQLEQLQEEMRCAANYEVEGR 134
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
L + + + VQ L + + L
Sbjct: 135 FLLSGLSTGIRPFVRDASGKVIYQGSLDSVQFEMERQELGKVSFNGRDIFPANDTQYTLR 194
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
+D + + + + + F++ +
Sbjct: 195 SVEVGMDFLWKGRDEILQLQVGDQMVKARLPEKWQDEKLDNIDDPTDFNRYRDPGEQEGY 254
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
A S G+ V+ + V + + + K+
Sbjct: 255 TLDDIAKAINDSMEMGNVKRLVSVTVEKDETRGVQRLVVKSHNGQPVRLTTWPETDQQKL 314
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ + + + KL + D
Sbjct: 315 AQGIGGTHVPAGFVADADSTMTVDFLNGVTYDVKVAAGDTLADIAAKLRSVPGIWASDNA 374
Score = 54.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 26/65 (40%)
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ G++ +R E +K + + ++ D D+A +T+ Q Q +
Sbjct: 945 DNLLKCRTECGALVNRYENSESRLKENNLNLTELQSKISDVDLAEAATQFQMAQAVYQAS 1004
Query: 433 VQALS 437
+ +S
Sbjct: 1005 LAVIS 1009
>gi|258622495|ref|ZP_05717517.1| flagellar hook-associated protein 3 [Vibrio mimicus VM573]
gi|258585195|gb|EEW09922.1| flagellar hook-associated protein 3 [Vibrio mimicus VM573]
Length = 299
Score = 73.2 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 54/143 (37%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + Q L+ N L V ++S+G R++ +D+ + + A+
Sbjct: 3 ISDTQFSQMMLQSLQTNNAGLGNVMQQMSTGERLTKLSDDPMASVKLLKLDREGSAIKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
D I + + + + + + + +++ + G + I++L+S IA
Sbjct: 63 QDNINMVKTTLSNQEVHLDSVSESLKSMRELVLWGANGTLTDEDRDGMISKLKSLRGSIA 122
Query: 124 RGSSFNGENWLRTDLGSSTASIA 146
+ E+ G+ T + A
Sbjct: 123 SSFNARDEDGHYLFSGTKTDTAA 145
>gi|288574710|ref|ZP_06393067.1| flagellin domain protein [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570451|gb|EFC92008.1| flagellin domain protein [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 1030
Score = 73.2 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/390 (7%), Positives = 88/390 (22%), Gaps = 15/390 (3%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M + + + + L + + S+G +D+ + + +
Sbjct: 1 MRRVSNSMMYGGMMTDMHNNLARLLKMNKQGSTGKLHHKPSDSPIDVTRELSLSTTIYEN 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQS 117
+ G + + + +++ +++ +++ + + + + E+ +LQ
Sbjct: 61 EQYIRNMNDGLTWLKNTDSALNQIGEMIDRVRSLSVRAGSGALNDEEMDAIAQEMIELQE 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+R+ A S + + +D D
Sbjct: 121 GIREAANYSVEGRYLLSGAATSVPAFQRDEEGHVIYAGNDYRVQFEMERGIVSDVSVTGK 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ D +Y L + E +I +
Sbjct: 181 EVFPDDYTQYTLRSADVPADFEWTGRNEIIQIQVGDRSVKIRIPEEDWEDDNYDSSTLTD 240
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
P+ L ++ + G + +R+ T I
Sbjct: 241 YNRFRDPGELHPMSLDDIAETIESSVNMGDAGKLVSVQVIKDEDAGTQKLEIRSHTGEPI 300
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + +S I+ T
Sbjct: 301 SMTSWPETDDIPMNQAVESLAVDDSVPGGYVLPSDGSIEIAIDDSQNITTL--------- 351
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+D + G +G + +
Sbjct: 352 ---NFTAGMTLDQMADQISGQEGLVGKVIN 378
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/202 (7%), Positives = 45/202 (22%), Gaps = 3/202 (1%)
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
++ + + + TS S + +
Sbjct: 817 YEHTMDLRELDADGSGVLSHDEMTSVVDLINSRFQGQDVEAQLYTDQAGDDHVILTSPKG 876
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY--- 355
+ + + + T +
Sbjct: 877 YEITVSGDLANDFFGAATITSPDHGGTGPYGQVVTRRTGADYRQTDFFGMMEDLIDAVKG 936
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ A+ ++ ID +I + G++ R + + + D D+
Sbjct: 937 QDSEAITTLLGDIDNEIDSLLKCRTEEGALVKRYEGSSSRLTQNNGNYTELYSSISDTDL 996
Query: 416 ASESTRLSALQTQQQLAVQALS 437
A + + Q+ Q + ++
Sbjct: 997 AKMAMEYMSAQSVYQAGLATIA 1018
>gi|254504776|ref|ZP_05116927.1| Bacterial flagellin N-terminus domain protein [Labrenzia alexandrii
DFL-11]
gi|222440847|gb|EEE47526.1| Bacterial flagellin N-terminus domain protein [Labrenzia alexandrii
DFL-11]
Length = 395
Score = 73.2 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 47/372 (12%), Positives = 112/372 (30%), Gaps = 4/372 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I ++ + L + VQ+++++G +V+ A DN + A+ +++ L
Sbjct: 21 MSDITLTNAVRANLNTLTSTAKMMSDVQNKLATGKKVNSALDNPNSFFTAKGLENRASDL 80
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT--DSKSIQSEITQLQSQ 118
S + D +G G + A G+S D++ K K ++ E L SQ
Sbjct: 81 STLLDDMGQGVQTLKAADKGISAISDLVDAAKAKANQALQTSDKVQRSKYAQEYNDLLSQ 140
Query: 119 LRDIARGSSFNGENWLRTDLGS--STASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+ D+A+ S + G+N L T + S S D +D
Sbjct: 141 MEDLAKDSGYKGKNLLSGTGNDLSLTFNEDGSSSLSISAVDYTNSSAGLGLSDIDRTATS 200
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+ + + + + + V+ + + +
Sbjct: 201 ATAQLEFAADGTSTTAHVVDQGTYKAGDTLTVTDSKGDSVGTVSITDTMSMADLATALNG 260
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
T + T A +++ T ++ + +++
Sbjct: 261 LTGVTSTYDNTTGNISFAGEGIQLKNGSEEIGTGGTISDFDTDSKIETALSALKSAQDTL 320
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ + + D +T + L + L + + +
Sbjct: 321 RAQASTFGTNLSIVENRQDFTTDLINTLQEGAGALTLADTNVEGANLLALQTQQQLASTS 380
Query: 357 EKLAMEEMVSFI 368
+A + + +
Sbjct: 381 LSMASQASQNVL 392
Score = 56.3 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 62/182 (34%)
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ V TY + S + T + +
Sbjct: 214 TTAHVVDQGTYKAGDTLTVTDSKGDSVGTVSITDTMSMADLATALNGLTGVTSTYDNTTG 273
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ I ++ +E +S + + A A G+ S
Sbjct: 274 NISFAGEGIQLKNGSEEIGTGGTISDFDTDSKIETALSALKSAQDTLRAQASTFGTNLSI 333
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ ++DF + + +++G G L AD E L ALQTQQQLA +LS+ + ++ +L
Sbjct: 334 VENRQDFTTDLINTLQEGAGALTLADTNVEGANLLALQTQQQLASTSLSMASQASQNVLR 393
Query: 449 LF 450
LF
Sbjct: 394 LF 395
>gi|254508428|ref|ZP_05120548.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus 16]
gi|219548638|gb|EED25643.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus 16]
Length = 397
Score = 73.2 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 46/422 (10%), Positives = 102/422 (24%), Gaps = 52/422 (12%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
LR + Q +++SG ++ A+D+ Q + L SDAI L ++
Sbjct: 15 QNDLRRQEGKVHHNQAQLASGKKLMKASDDPLATHYIQNIGQQKEQLRQYSDAIVLTRNR 74
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
++ + +S A + K + + + + ++ +IA F
Sbjct: 75 LEHHEVIISNAEEFADEAKRTVMEMINGALSPEDR----FAKRREIEEIANN--FLNLVN 128
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
++ + G+ + K F RD +
Sbjct: 129 VQDESGNYIFAGTKPKNQPFFRDKD----------------------------------- 153
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
V D L D G + L
Sbjct: 154 -----------AEVVYAGDDYQRKMKISNSLEMPINDPGSKLFMEIDNPFGDFSPKYDLQ 202
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
A + S + + + +D + +
Sbjct: 203 EASELLLERAINLNPDDQSTYKVTFVDMPNGKYGYQLERDGSVVQADTFDPSKGIKYEDV 262
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T + + + + + + + ++
Sbjct: 263 TIQVKGQITKGDAIELEPRRTYSIFETFKEAMDLSSGSVSDSSNTAQLHQVTQEFHAAFI 322
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G+ + + +QE+ + K D D A+ + Q +
Sbjct: 323 HLNKARTDVGARLNTLDIQEEQHADFEMTLAKSKSNFEDLDYAAAIIEFNENSRALQASQ 382
Query: 434 QA 435
QA
Sbjct: 383 QA 384
>gi|269836593|ref|YP_003318821.1| flagellar hook-associated protein 3 [Sphaerobacter thermophilus DSM
20745]
gi|269785856|gb|ACZ37999.1| flagellar hook-associated protein 3 [Sphaerobacter thermophilus DSM
20745]
Length = 291
Score = 73.2 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 20/201 (9%), Positives = 53/201 (26%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + + + L+ V D++ SG ++ +D+ + + S +
Sbjct: 3 VSTAMMSETILWNITRNAARLDRVADQIGSGRQIRRPSDDPVGTANVLQLDSTRARIQQH 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I S +D +S + + A ++ + T+LQ L
Sbjct: 63 LRNIDDARSWIDATDQALSSINAGIQRAREITLAAANGTLAPENRDAIETELQRILELAI 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ + + + + + ID + + +
Sbjct: 123 GTANTRLNGRYIFSGQKTDTPAFSGPPNAPVYQGDSGPIVRVIDVGVTVTINVTGDTAIL 182
Query: 184 TERYGLLDRNHKIKVEPQVLK 204
L +
Sbjct: 183 PTLNALAQAQAAVAANDPDAM 203
Score = 57.8 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 54/153 (35%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
N+ + R T P ++ A V + + D+
Sbjct: 125 ANTRLNGRYIFSGQKTDTPAFSGPPNAPVYQGDSGPIVRVIDVGVTVTINVTGDTAILPT 184
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + A N+ AM + +D A + G+I S++ Q ++ + +
Sbjct: 185 LNALAQAQAAVAANDPDAMRAAIDALDDAHTALLTAQARAGAIGSQLEEQASRLEALDVS 244
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
V + ++ D D+A + S LQT Q ++ A
Sbjct: 245 VARLRSQIQDVDLAKAVSDYSTLQTIYQASLAA 277
>gi|30721712|gb|AAP34187.1| FliC [Pseudomonas aeruginosa]
Length = 157
Score = 73.2 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 30/103 (29%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T S + + + + V ID IK
Sbjct: 55 TSAVSGVVIADTGSTGVGTAAGVTPSATAFAKTNDTVAKIDISTAKGAQSAVLVIDEAIK 114
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
A +G++ +R + +K + + V GR+ D D A
Sbjct: 115 QIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDFA 157
>gi|303325591|ref|ZP_07356034.1| flagellar hook-associated protein 3 [Desulfovibrio sp. 3_1_syn3]
gi|302863507|gb|EFL86438.1| flagellar hook-associated protein 3 [Desulfovibrio sp. 3_1_syn3]
Length = 519
Score = 73.2 bits (177), Expect = 9e-11, Method: Composition-based stats.
Identities = 23/354 (6%), Positives = 78/354 (22%), Gaps = 4/354 (1%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+++ ++ S+ +++ +D+ A + D A + + ++
Sbjct: 17 QMQKNLAAYMESNEQGSTQKKINRPSDDPAGAYRVLTTRDDLNATAQYQTNVDTARGWLE 76
Query: 76 IAKAGMSK-AIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
+A + +S + +++ + K I + Q+ L +++
Sbjct: 77 LADSVLSTRVSTLFQDLESLAQQASNTEMSAENRKQIGERVKQIFGSLLNLSNTEFEGKS 136
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
+ + ++ Q +++L ++DG
Sbjct: 137 LFAGHKYDKNAFEQGLALTSWDDNWSGDISQGNYSIQGASDTSMMLQFTSDGNLSDPATY 196
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
R K + V+ T A V
Sbjct: 197 RWSKDGGTTWNDGTVQVNAGPPQTYDMVADGVTVTMKQDMAVKAADVDAGPGAENGTLVY 256
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + + + + +
Sbjct: 257 IRPTAVYQGDDKDPPPEMTVMGGQQGLRASASGTFSKNMLVRMDEPAAGVDLNTTGEEFT 316
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + T + + +++ + M+
Sbjct: 317 WSYSTDGGSTWVTAKGQTSGGGTVRLPVPGGYMDLDATTAAGGTTVPAGAQVMI 370
Score = 50.1 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/329 (10%), Positives = 85/329 (25%), Gaps = 9/329 (2%)
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+++ +++ T T + ++ +G D + V
Sbjct: 189 NLSDPATYRWSKDGGTTWNDGTVQVNAGPPQTYDMVADGVTVTMKQDMAVKAADVDAGPG 248
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + ++ V S + A
Sbjct: 249 AENGTLVYIRPTAVYQGDDKDPPPEMTVMGGQQGLRASASGTFSKNMLVRMDEPAAGVDL 308
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
G + T G + ++ TT +
Sbjct: 309 NTTGEEFTWSYSTDGGSTWVTAKGQTSGGGTVRLPVPGGYMDLDATTAAGGTTVPAGAQV 368
Query: 301 PGYTNS---TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + + +T+ V+ + K G + V + N
Sbjct: 369 MIHPSRADLNYEILKDTYISVNGIGKDIFGGYYQGKPAIEGDANVFEVVGNLIAYCENNN 428
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ + + T A + G + +R+ + D + + ++ + D D+
Sbjct: 429 ATGCGQSLAALKKAHERITTEADRYGGLENRVEMAADVLSFQKLDQQERLSYTEDIDLTE 488
Query: 418 ESTRLSALQ-----TQQQLAVQA-LSIVN 440
T+L+ Q Q ++ LS+ N
Sbjct: 489 LLTKLTRQQLTYQTVLQSSSMIMKLSLAN 517
>gi|260772281|ref|ZP_05881197.1| flagellar hook-associated protein FlgL [Vibrio metschnikovii CIP
69.14]
gi|260611420|gb|EEX36623.1| flagellar hook-associated protein FlgL [Vibrio metschnikovii CIP
69.14]
Length = 397
Score = 73.2 bits (177), Expect = 9e-11, Method: Composition-based stats.
Identities = 49/426 (11%), Positives = 108/426 (25%), Gaps = 52/426 (12%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
LR + Q +++SG ++ A DN Q + L DAI L ++
Sbjct: 15 QNDLRRQENKVHHNQAQLASGKKLLSAGDNPLATHYIQNVTQQEEQLRQYLDAIVLVRNR 74
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
++ + +S A + K + + + +++ Q+++IA F
Sbjct: 75 LEHQEVIISNAEEFTDKAKRMVMEMINGSLSPEDRETQAR----QIQEIANN--FLNLAN 128
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
++ + G+ + + F RD+ G V DY
Sbjct: 129 VQDETGNFIFAGTRPKNQPFFRDNQGNVTYYGDDYQRKMRISN----------------- 171
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
L + G L
Sbjct: 172 -----------------------------NLEMPFNTPGNQMFMDINNPFGDFEPEYALQ 202
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+ S + + + + + + V G
Sbjct: 203 EGSELLLERATNSDDGDNASYTVTFVDMLNGGFAYQLERDGEVVEVNDFDPRTGVQYQGL 262
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T + + + K S + + + ++ + T
Sbjct: 263 TINIKGSITAGDSITLNPRKTFTVFDSFKKAIEYSKGSVSDASTTGKLHQITEELHTAFI 322
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ S + LQED + + ++ + + D D + + Q +
Sbjct: 323 HLNQVRSDVGARLSTLDLQEDQHEDFKISLARSKSQFEDLDYSQAVIEFNENSRALQASQ 382
Query: 434 QALSIV 439
A
Sbjct: 383 LAFGKA 388
>gi|168183197|ref|ZP_02617861.1| flagellar hook-associated protein 3 [Clostridium botulinum Bf]
gi|237796174|ref|YP_002863726.1| flagellar hook-associated protein 3 [Clostridium botulinum Ba4 str.
657]
gi|182673643|gb|EDT85604.1| flagellar hook-associated protein 3 [Clostridium botulinum Bf]
gi|229261031|gb|ACQ52064.1| flagellar hook-associated protein 3 [Clostridium botulinum Ba4 str.
657]
Length = 320
Score = 73.2 bits (177), Expect = 9e-11, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 61/185 (32%), Gaps = 7/185 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I A S + + NL + + SSG S + + A + + + A
Sbjct: 3 ITNKMMANSFMTDMNNNLENLNRINQQSSSGKNFSKPSHDPAGVIRSMQLHTGIDANKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ I + +D+ + + + I++K+ G E L+ ++ I
Sbjct: 63 NKNISNVINWLDVTDTALDQIGKQLGKIRDKLEEAGNAGYGET----ERKALKDEVNGII 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
S + G S + +G + +IDY ++ LD + D
Sbjct: 119 ASMS---QTLNTNFDGKYVFSGTRVTGKPTGIQKDGTTKNNSIDYINKDGSMPLDPAGDE 175
Query: 184 TERYG 188
++
Sbjct: 176 YKQMN 180
Score = 54.7 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 25/62 (40%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ ID + ++G+ +R+ ++ K + + + + D + A + +
Sbjct: 236 LGNIDKALDNVLRIRAEVGAKQNRMEAAKEMNKETNFNMTEILSNIEDVNYAEKHMEFAV 295
Query: 425 LQ 426
LQ
Sbjct: 296 LQ 297
>gi|85715035|ref|ZP_01046020.1| hypothetical protein NB311A_11702 [Nitrobacter sp. Nb-311A]
gi|85698232|gb|EAQ36104.1| hypothetical protein NB311A_11702 [Nitrobacter sp. Nb-311A]
Length = 536
Score = 73.2 bits (177), Expect = 9e-11, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + +++ +DT A +GS S + +++DF K + + ++ G L AD
Sbjct: 442 DNGSANSVLASLDTASSTLRTQASTLGSNLSIVQIRQDFSKNLINVLQTGSSNLTLADTN 501
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV AL++ N S +L L R
Sbjct: 502 EEAANSQALATRQSIAVSALALANQSQQSVLQLLR 536
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 42/97 (43%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ + S L+ L Q R+++G +V+ A DN + A + + +
Sbjct: 1 MSDIVLSASVRQNLLSLQSTADLLARTQHRLATGKKVNTALDNPTNFFTAAALDNRANDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA 97
S + D IG G + A G++ ++ T K+
Sbjct: 61 SNLLDGIGNGIQVLQAANTGLTSLQKLVDTAKSVANQ 97
>gi|258625227|ref|ZP_05720139.1| flagellar hook-associated protein 3 [Vibrio mimicus VM603]
gi|258582474|gb|EEW07311.1| flagellar hook-associated protein 3 [Vibrio mimicus VM603]
Length = 299
Score = 73.2 bits (177), Expect = 9e-11, Method: Composition-based stats.
Identities = 23/160 (14%), Positives = 58/160 (36%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + Q L+ N L V ++S+G R++ +D+ + + A+
Sbjct: 3 ISDTQFSQMMLQSLQTNNAGLGNVMQQMSTGERLTKLSDDPMASVKLLKLDREGSAIKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
D I + + + + + + + +++ + G + I++L+S IA
Sbjct: 63 QDNINMVKTTLSNQEVHLDSVSESLKSMRELVLWGANGTLTDEDRDGMISKLKSLRGSIA 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
+ E+ G+ T + A + + + +
Sbjct: 123 SSFNARDEDGHYLFSGTKTDTAALNKTDAGYVFNGNNDKR 162
>gi|226939367|ref|YP_002794440.1| FlgL [Laribacter hongkongensis HLHK9]
gi|226714293|gb|ACO73431.1| FlgL [Laribacter hongkongensis HLHK9]
Length = 311
Score = 72.9 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 22/223 (9%), Positives = 73/223 (32%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN + + S + + + ++S+ RV+ +D+ + + + S
Sbjct: 3 ISTNSTFLQGSYGVSIQQSLMSQLNVQLSTLKRVNTPSDDPVAAARILDISQSDARNSQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ S ++ ++ + + +++ +K ++++ ++ L ++
Sbjct: 63 INNTKAAESALEFSETSLDRISNIIIQMKEMSVQAGNGAASDENLKQMSKVFKASLEEMV 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ + G+S+ + A ++ G++ +T + S G
Sbjct: 123 AVANSTDASGKYVFSGTSSDTPAYTMTGNWPVVTITYGGNDGQKSLAISDTRSIAISEPG 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ +G + E + + + T
Sbjct: 183 SSIFGEGSADAGSLFETMSRMAALLENGRTGTYPAGSYEQELT 225
Score = 37.8 bits (85), Expect = 3.7, Method: Composition-based stats.
Identities = 16/154 (10%), Positives = 39/154 (25%)
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
T +D + + + S
Sbjct: 147 TMTGNWPVVTITYGGNDGQKSLAISDTRSIAISEPGSSIFGEGSADAGSLFETMSRMAAL 206
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
L R A + + + + +++ ++ +GS + + +
Sbjct: 207 LENGRTGTYPAGSYEQELTAIQGGLESGLQSVLTGQASVGSRRLEAQNAGNLGEDLSLVY 266
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
K L D D+ ++ L+ Q Q + + S
Sbjct: 267 AKTRSNLEDLDVPKAASDLAMAQMALQASQLSFS 300
>gi|148380697|ref|YP_001255238.1| flagellar hook-associated protein 3 [Clostridium botulinum A str.
ATCC 3502]
gi|153933227|ref|YP_001384981.1| flagellar hook-associated protein 3 [Clostridium botulinum A str.
ATCC 19397]
gi|153936218|ref|YP_001388451.1| flagellar hook-associated protein 3 [Clostridium botulinum A str.
Hall]
gi|226950151|ref|YP_002805242.1| flagellar hook-associated protein 3 [Clostridium botulinum A2 str.
Kyoto]
gi|148290181|emb|CAL84300.1| flagellar hook-associated protein 3 [Clostridium botulinum A str.
ATCC 3502]
gi|152929271|gb|ABS34771.1| flagellar hook-associated protein 3 [Clostridium botulinum A str.
ATCC 19397]
gi|152932132|gb|ABS37631.1| flagellar hook-associated protein 3 [Clostridium botulinum A str.
Hall]
gi|226840871|gb|ACO83537.1| flagellar hook-associated protein 3 [Clostridium botulinum A2 str.
Kyoto]
Length = 320
Score = 72.9 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 61/185 (32%), Gaps = 7/185 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I A S + + NL + + SSG S + + A + + + A
Sbjct: 3 ITNKMMANSFMTDMNNNLENLNRINQQSSSGKNFSKPSHDPAGVIRSMQLHTGIDANKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ I + +D+ + + + I++K+ G E L+ ++ I
Sbjct: 63 NKNISNVINWLDVTDTALDQIGKQLGKIRDKLEEAGNAGYGET----ERKALKDEVNGII 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
S + G S + +G + +IDY ++ LD + D
Sbjct: 119 ASMS---QTLNTNFDGKYVFSGTRVTGKPTGIQKDGTTKNNSIDYINKDGSMPLDPAGDE 175
Query: 184 TERYG 188
++
Sbjct: 176 YKQMN 180
Score = 54.7 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 25/62 (40%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ ID + ++G+ +R+ ++ K + + + + D + A + +
Sbjct: 236 LGNIDKALDNVLRIRAEVGAKQNRMEAAKEMNKETNFNMTEILSNIEDVNYAEKHMEFAV 295
Query: 425 LQ 426
LQ
Sbjct: 296 LQ 297
>gi|146277701|ref|YP_001167860.1| flagellin-like protein [Rhodobacter sphaeroides ATCC 17025]
gi|145555942|gb|ABP70555.1| Flagellin and related hook-associated protein-like protein
[Rhodobacter sphaeroides ATCC 17025]
Length = 409
Score = 72.9 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 59/437 (13%), Positives = 123/437 (28%), Gaps = 46/437 (10%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT + T A AS+ I + +Q+R+S+ + + + A + AL
Sbjct: 1 MT-LGTTLFATLASRNFARIQTEIGGLQERISAATQDPRPSADPARALQLSAAREVQDAL 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
S S G + ++ + + +K+ + ++ E L+
Sbjct: 60 SRFSVNAGTAAERLAHLDVTLGDVASHVRDLKDIVLQMGNASLTDEGRAGLRIEAEALRE 119
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ A G+ G +T + + N + + L T L
Sbjct: 120 AMLAAANRKDGTGQGL---FSGYATGAAFEKTATGVRFAGNAGQPVAQLSESLRVATSLG 176
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ T R+ + V
Sbjct: 177 GNEVFMTVETEGGVRSLFDLADDLVAA--------------------------------- 203
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
I + + + + + G+++I R
Sbjct: 204 ------LSPPISKATTSRTSVGTASLSIEPVQGEATLRFTLTGPGGSAEIEQRLPGSVEE 257
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + + + S + + + + TL R ++
Sbjct: 258 AINAAAATTGITATTAADGSLRLASLGTIELSGMSRSDGAREVLATLTDERGREGWVVDK 317
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ M + D I + GS+++ + Q + IK + + + V L D D+A+
Sbjct: 318 RFGASPMTAAFDAAIGHMAEQRARAGSLAASVDSQMEAIKGRQTRMTQTVAGLEDLDVAA 377
Query: 418 ESTRLSALQTQQQLAVQ 434
TRL AL Q+ A Q
Sbjct: 378 AVTRLQALLLTQEAAQQ 394
>gi|13560138|emb|CAC36203.1| flagelline [Treponema denticola]
Length = 221
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 52/157 (33%), Gaps = 3/157 (1%)
Query: 47 WSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGT 103
++++ M+S L S G S + +A+ + + DV+ I+
Sbjct: 1 LAVSEKMRSQIRGLDQASANAQNGISFIQVAERFLQETTDVIQRIRELSIQSSNGIYSAE 60
Query: 104 DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
D IQ E++QL +++ IA + FNG N L T + F N ++
Sbjct: 61 DQMYIQVEVSQLIAEVDRIASHAQFNGMNMLTGRFARETGENVVTGSMWFHIGANMDQRM 120
Query: 164 TTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
+ + + D +
Sbjct: 121 RVYIGTMSAAALGIRDIGDEKIMTIETADAANRSIGT 157
Score = 64.0 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 27/76 (35%)
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
A + ID +K +G +R+ L I + + ++ R+ D
Sbjct: 143 MTIETADAANRSIGTIDEGLKKINKQRADLGGYQNRMELTVVGIDIAAENLQAAEPRIRD 202
Query: 413 ADMASESTRLSALQTQ 428
ADMA + + Q
Sbjct: 203 ADMAKQMVDNTKNQIL 218
>gi|146305257|ref|YP_001185722.1| flagellar hook-associated protein FlgL [Pseudomonas mendocina ymp]
gi|145573458|gb|ABP82990.1| flagellar hook-associated protein 3 [Pseudomonas mendocina ymp]
Length = 305
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 46/142 (32%), Gaps = 3/142 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I + + + L + +++SG R+ +D+ ++ + +L
Sbjct: 1 MMRITNSQITSMMHNSMNASSAELGKLMQQMASGKRILLPSDDPIASVRVLRVQREEASL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQS 117
I S + +A + D M +++ G D ++ E++ ++
Sbjct: 61 EQFRKNIANVSGSLSTQEANLKSTSDSMLNVRDLLLWAANGSNTSEDLAAMAGELSIIED 120
Query: 118 QLRDIARGSSFNGENWLRTDLG 139
+ A G L
Sbjct: 121 TIFSFANVRDEEGRYLFSGTLS 142
>gi|30721706|gb|AAP34184.1| FliC [Pseudomonas aeruginosa]
Length = 154
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 30/103 (29%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T S + + + + V ID IK
Sbjct: 52 TSAVSGVVIADTGSTGVGTAAGVTPSATAFAKTNDTVAKIDISTAKGAQSAVLVIDEAIK 111
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
A +G++ +R + +K + + V GR+ D D A
Sbjct: 112 QIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDFA 154
>gi|148254595|ref|YP_001239180.1| putative flagellin [Bradyrhizobium sp. BTAi1]
gi|146406768|gb|ABQ35274.1| putative flagellin [Bradyrhizobium sp. BTAi1]
Length = 274
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +I TN +A SA + L + ++SSG R++ A+D+AA +I+ + SD L
Sbjct: 1 MPAISTNIAANSAVRYLNINSNQETSSLSKLSSGSRITSASDDAAGLAISTRISSDITTL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI---TAGVERGTDSKSIQSEITQLQS 117
+ +S + A G S D+++ +K+ +G GT IQSE +QL S
Sbjct: 61 QQAATNAAQATSILQTADGGASNISDILARMKSLASESASGTTVGTSRTYIQSEFSQLIS 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASI 145
++ IA G+ ++G++ L S
Sbjct: 121 EISSIATGTRYSGQSLLDGTSTFSAGVS 148
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 47/136 (34%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + T ++ + + ++ +DT I
Sbjct: 138 DGTSTFSAGVSVLVGSSATDTIDIKLSDLTASTLGVSSLDVSTQSGATAALTTLDTAIDT 197
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ A IG+ SR + D I ++ + D D+ASE +LS+ Q + Q AV
Sbjct: 198 VSKARADIGAQESRFNFSADSISTQTQNLQSANSAIKDVDIASEQAKLSSAQVKTQAAVS 257
Query: 435 ALSIVNNSTARILSLF 450
A + N +L L
Sbjct: 258 AEAAANQIPQYLLKLL 273
>gi|170743193|ref|YP_001771848.1| hypothetical protein M446_5088 [Methylobacterium sp. 4-46]
gi|168197467|gb|ACA19414.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
Length = 630
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/293 (16%), Positives = 91/293 (31%)
Query: 159 GKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
GKV + S T+ + + T++
Sbjct: 338 GKVANLGFSTTSFGAGLGAGSGTNFKQSPLNGQTITVRVANGTGVTLTFGPAAGQISTLT 397
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
LA + + A+P TS + + A AT
Sbjct: 398 QLNAALAPANAQATLDPTTGQIKLTTTNEAGADSLTLIASPPPTSNNVANPFNTGTAIAT 457
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
G + TT N + + + + G D + + R +
Sbjct: 458 IGGDGLTARNGLVTTYNGLLTQIDQLAADASFNGVNLLAGDNLTLNFNERSTSQLSVTGV 517
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ E +A+ ++++ I++ A +G+ + + ++DF K
Sbjct: 518 NVSAASLGLTPVGQADFVESIAINKVLATINSAASALKNQAASLGANLAVVQNRQDFTKQ 577
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ G L +ADM E+ ALQT+ L ALS+ N + IL L R
Sbjct: 578 LITVLDTGAANLTNADMNEEAANSQALQTRTSLGTSALSLANQAQQAILQLLR 630
Score = 66.3 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 48/110 (43%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SI + + L+D L Q+R+++G +V+ A DN + A + + + L
Sbjct: 1 MSSITLSAATRQNLLSLQDTASLLATTQNRLATGKKVNTALDNPTNYFTADGLTARSAGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS 110
SA+ D + G + A G++K + +K+ + + S
Sbjct: 61 SALLDGVSNGIQVIQAANTGITKLKSLTEQLKSVAQQALSSANAFSAKAS 110
>gi|307945676|ref|ZP_07661012.1| flagellin [Roseibium sp. TrichSKD4]
gi|307771549|gb|EFO30774.1| flagellin [Roseibium sp. TrichSKD4]
Length = 385
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/286 (16%), Positives = 93/286 (32%), Gaps = 3/286 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I + S L+ + VQ+++S+G +V+ A DN + A+ +++ L
Sbjct: 1 MSGITITSAVRSNLVALQSTADMMSSVQNKLSTGKKVNSALDNPNSFFTAKGLENRANDL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG--TDSKSIQSEITQLQSQ 118
+ + D G + A G+ +++ K K ++ ++ + SE +L +Q
Sbjct: 61 ATLLDDQGQAIQTLKAADKGIGAIGELVDAAKAKANQALQTSSISEREQFASEYNELLTQ 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ DIA+ S + G+N L G+ + S + T+ L+ +
Sbjct: 121 IEDIAKDSGYKGKNLLAGT-GNDLNVVFNEDGSSDLDITAIDYTDTSSATGLNLSDLSDS 179
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
T + +D + T
Sbjct: 180 EGGTATFSLNNDGATGTPALTGGAKVTLDDAFSVGDTLTITNTAGEEKKIEITEDLTVTE 239
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGN 284
+ A ++ A TS K S ++S G
Sbjct: 240 LENAIKGSSDDTTASFAKGTMTITSTDEAFKISSDSSSFADKSGGT 285
Score = 51.7 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 58/371 (15%), Positives = 115/371 (30%), Gaps = 2/371 (0%)
Query: 80 GMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
+ D+MS+++NK++ G + + + S T L + A + ++ +
Sbjct: 16 ALQSTADMMSSVQNKLSTGKKVNSALDNPNSFFTA--KGLENRANDLATLLDDQGQAIQT 73
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
A IG + K + + + + ++ K +
Sbjct: 74 LKAADKGIGAIGELVDAAKAKANQALQTSSISEREQFASEYNELLTQIEDIAKDSGYKGK 133
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+ + + S+ A A
Sbjct: 134 NLLAGTGNDLNVVFNEDGSSDLDITAIDYTDTSSATGLNLSDLSDSEGGTATFSLNNDGA 193
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
T +G ++ + + K IT D T A G++
Sbjct: 194 TGTPALTGGAKVTLDDAFSVGDTLTITNTAGEEKKIEITEDLTVTELENAIKGSSDDTTA 253
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + + + + + +E +S + + A A
Sbjct: 254 SFAKGTMTITSTDEAFKISSDSSSFADKSGGTLGGFGSDSDIESTLSSLKSAQDTLRAQA 313
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
G+ S + +E F K M + +E+G G+L AD E L ALQTQQQLA +LS+
Sbjct: 314 STFGTNLSIVQNRESFTKDMINTLEEGAGKLTLADTNQEGANLLALQTQQQLASTSLSLA 373
Query: 440 NNSTARILSLF 450
+ ++ +L L
Sbjct: 374 SQASQNVLRLI 384
>gi|225375214|ref|ZP_03752435.1| hypothetical protein ROSEINA2194_00839 [Roseburia inulinivorans DSM
16841]
gi|225212881|gb|EEG95235.1| hypothetical protein ROSEINA2194_00839 [Roseburia inulinivorans DSM
16841]
Length = 512
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/371 (9%), Positives = 99/371 (26%), Gaps = 4/371 (1%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA-VSDAIGLG 70
+ + + + Y++ + +++SS ++S +++ A ++S+ ++ I
Sbjct: 5 NTTSNINNNKYSVNSLNNQMSSQKKISRPSEDPVVAIRALRLRSNLSEINQYYEKNIPDA 64
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVER---GTDSKSIQSEITQLQSQLRDIARGSS 127
+ +++ + + ++S I+ + T G D K+I +++ L+ Q+ S
Sbjct: 65 DAWLNVTETALENMKTILSDIRTQCTYGASDQLKAEDRKTILTQLESLRKQIYSEGNSDS 124
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
+ + + + Y D + L + +
Sbjct: 125 AGRTVFTGYRTNCKLTFMEDESNTEYNIQQKFSYEDIGEHRYYDGQVELKTAEEMSQKVT 184
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ + +I I+ + A T D +
Sbjct: 185 TSDTKQYTYDRIRLAYGNIGSLKDKDGNEIAVGNTGTLSYHYTDNTGAAKTGDLNVTVYE 244
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
A A N + + + N
Sbjct: 245 TEDDWKKAVKAGNMPKDGAAFIKSTGELVLGNEASETLKQNKASIELNYDKKGFNSGEVR 304
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
N D ++ + D + + + + + ++
Sbjct: 305 PEYYFNCTDITDAKNKITYEKYDAKGNEIYQDIDYIIAVNQTLTVNTNASDVFNADIGRD 364
Query: 368 IDTQIKCATAA 378
+D I AA
Sbjct: 365 VDEMINAVKAA 375
>gi|285307475|emb|CAX28537.1| flagellin A [Helicobacter muridarum]
Length = 109
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 26 VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAI 85
+++SSGLR++ AAD+A+ +IA ++S AL + IA+ GM + +
Sbjct: 1 TSLEKLSSGLRINKAADDASGMTIADSLRSQASALGQAISNTNDAMGIIPIAEKGMDEQL 60
Query: 86 DVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
++ T K K T + +++I S IT L L I +SF G+
Sbjct: 61 KILDTGKIKATPAAQEGQTTESTRAIPSYITTLIQGLDMIGNTTSFYGQ 109
>gi|330830296|ref|YP_004393248.1| flagellar hook-associated protein 3 [Aeromonas veronii B565]
gi|328805432|gb|AEB50631.1| Flagellar hook-associated protein 3 [Aeromonas veronii B565]
Length = 402
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/437 (11%), Positives = 103/437 (23%), Gaps = 52/437 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN L N L ++ +G + A ++ A S + +
Sbjct: 3 ITTNMIYDRNIYSLNSANERLNTAYQQLQTGNKFQTAGEDPAGMSQKMALTKEIDLFKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
S L + + + + M + + I D K+I SE+ LQ Q+
Sbjct: 63 SVNGSLLENSLGHEETVLDSLNTAMLSAQTLIQKSNNGAISMDDRKAIASELEGLQQQMF 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
D+ + +GE + + I + + D G+ I
Sbjct: 123 DLMNSKNSSGEFIFGGNQSKTQPYIKDANGKYIYQGDPGQRNIQVSPTVQIAANDSGQDL 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + Y ++ +
Sbjct: 183 FEIVATRRTASATTANIKVGVGDQGNFDNFYKSNYNSA---------------------- 220
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
S + S DI T +
Sbjct: 221 ---------------------------LPSNTYTVSTIIGPPDTYDIKDAGGTTLQTGNY 253
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T + T + + + R A N L
Sbjct: 254 TAGTKIPFNGLELTLDLPAGGAAQQFDLNPPKNDNVLNGMSDFITALRDPAITADNFALE 313
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + + G++G + + D + + + ++ +AD+ +
Sbjct: 314 VADATVHMKNARLNIDHGLGELGGRMNSLEAVMDSNEGLSTLNAEARAKVSEADLYEVIS 373
Query: 421 RLSALQTQQQLAVQALS 437
LS + + S
Sbjct: 374 ALSKEDAALSASQLSFS 390
>gi|262173361|ref|ZP_06041038.1| flagellar hook-associated protein FlgL [Vibrio mimicus MB-451]
gi|261890719|gb|EEY36706.1| flagellar hook-associated protein FlgL [Vibrio mimicus MB-451]
Length = 299
Score = 72.9 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/160 (13%), Positives = 57/160 (35%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + Q L+ N L V ++S+G R++ +D+ + + A+
Sbjct: 3 ISDTQFSQMMLQSLQTNNAGLGNVMQQMSTGERLTKLSDDPMASVKLLKLDREGSAIKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
D I + + + + + + + +++ + G + I++L+S I
Sbjct: 63 QDNINMVKTTLSNQEVHLDSVSESLKSMRELVLWGANGTLTDEDRDGMISKLKSLRGSIV 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
+ E+ G+ T + A + + + +
Sbjct: 123 SSFNARDEDGHYLFSGTKTDTAALNKTDAGYVFNGNNDKR 162
Score = 36.3 bits (81), Expect = 9.6, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 27/78 (34%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ ID + A +IG + + L E + V+K G L D S RL
Sbjct: 214 SSLKAIDDSLANVLGALTEIGGRYNNLDLMESAHSENKLFVDKVTGDLSKLDYGEASVRL 273
Query: 423 SALQTQQQLAVQALSIVN 440
S Q + +N
Sbjct: 274 SNFMAALQATQASYVKIN 291
>gi|73745738|gb|AAZ81993.1| flagellin subunit FliC [Clostridium difficile]
Length = 138
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 48/121 (39%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T+ T + + + +T + N D + A ++MVS +D +K
Sbjct: 18 TNVAGTTNNNNEIKVALVNTSSIMSKAGITSSTIASLNVDGASGTDAAKQMVSSLDVALK 77
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ K+G+ +R+ ++ + + V R+ D D+ASE LS + Q +
Sbjct: 78 ELNTSRAKLGAQQNRLESTQNNLNNTIENVTAAESRIRDTDVASEMVNLSKMNILVQASQ 137
Query: 434 Q 434
Sbjct: 138 S 138
>gi|238922535|ref|YP_002936048.1| flagellar hook-associated protein FlgL [Eubacterium rectale ATCC
33656]
gi|238874207|gb|ACR73914.1| flagellar hook-associated protein FlgL [Eubacterium rectale ATCC
33656]
Length = 510
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/375 (8%), Positives = 98/375 (26%), Gaps = 2/375 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + + ++ ++++ ++S A+++ + + + L
Sbjct: 3 ITNNMIMGNTKTNINSTKVLVDKYNTQMTTQKKISKASEDPVIAIRSLRLSTSLSHLDQY 62
Query: 64 SD-AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
D I SS +D+ + +S +++ I+ + G + + + QL + L +
Sbjct: 63 KDNNIPDASSWMDVTETALSNMKSLLTDIRTQCVNGSTDTLTADDRNTILQQLTA-LSEQ 121
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
G T+S + + T +
Sbjct: 122 VYTEGNADYAGRTVFTGYRTSSKLTFQKDTKSTYQITQEFSAADLSEKRYYTNGVTVPNS 181
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ ++ + D +I K+ T + ++ +
Sbjct: 182 INAATPDCATDVTEHSFQRIRLGYGNTTDDVKLSIDGKELTQGTDYTVYKSVSDFDPSKL 241
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
T + + + + ++ + +SD ++
Sbjct: 242 SADDTAYIQETGEFVFGKNVAASIKNNEKKLSVTYVKTGFDSSDARPEYYYNCKDITNAV 301
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
++ + + + + + +IT + +
Sbjct: 302 TLDAGGNVPHDAAGDIIYSDPSKVVDFKFSSQEIKDTVANSTDITVNTQAKDVMDTGIKR 361
Query: 363 EMVSFIDTQIKCATA 377
++ ID A
Sbjct: 362 DVDELIDVVQNAVNA 376
>gi|89068721|ref|ZP_01156107.1| hypothetical protein OG2516_06771 [Oceanicola granulosus HTCC2516]
gi|89045684|gb|EAR51746.1| hypothetical protein OG2516_06771 [Oceanicola granulosus HTCC2516]
Length = 269
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 77/152 (50%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M+A LR IN NL QDR+S+GL+V+ A DNA+Y+SI+ + S++G A+++ + L
Sbjct: 1 MNALSTLRSINNNLNQTQDRISTGLKVNSAKDNASYFSISTTLSSESGMNKAINEGLTLS 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ V A+ G +D+ +++ E G D +Q E+ L +Q++ S+FNG
Sbjct: 61 KNSVSTARLGAETFVDLAKEFIDRVAFAQETGVDHAKVQEELDSLVAQMKTTIDQSNFNG 120
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
EN L T + ++ +
Sbjct: 121 ENLLSTAGAGAKTIVSGVTGVGGATVSTSTIT 152
Score = 62.8 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 54/95 (56%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ ++ + + + A + +G I Q++F+ + + ++ GVG +VDADM
Sbjct: 175 DATTLKAAMDTASSNLALAIENSTALGVAEKAIETQQNFLSELTNRLDSGVGSMVDADME 234
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ RL ALQ QQQLA Q+LSI N + ILSLFR
Sbjct: 235 EEAARLQALQVQQQLATQSLSIANQAPQNILSLFR 269
>gi|4760511|dbj|BAA77316.1| flagellin [Pseudomonas putida]
Length = 131
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 3/113 (2%)
Query: 44 AAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VE 100
AA I+ + + LS G S A+ M+ + ++M ++
Sbjct: 1 AAGLQISNRLTTQIKGLSVAVKNANDGISIAQTAEGAMATSGNIMQRMRELALQSANGSN 60
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
D S+Q E T L +L IA ++F G N L S+ + + S
Sbjct: 61 SDDDRASMQQEFTALSGELTRIANTTTFGGRNLLDGTFSGSSFQVGANSNESI 113
>gi|28974953|gb|AAO61413.1| flagellin [Ralstonia solanacearum IPO1609]
gi|28974955|gb|AAO61414.1| flagellin [Ralstonia solanacearum]
Length = 241
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 79/241 (32%), Gaps = 3/241 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ +N S++ Q L L+ R+S+GLRV+ A D++A ++ + + + + +
Sbjct: 1 LSLNSNISSLQTQQALSQSQSALQKSLQRLSTGLRVNSAQDDSAAYAASSSLTTTLNSQT 60
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
+S + A + + + + + ++ D ++ E QL +
Sbjct: 61 QGIQNANGANSYLQTADSYLGQVENNLQRMRQLAVESNNGGLSAADQTNLDKEYQQLATA 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
++I +++NG + S+T ++ N + +
Sbjct: 121 NKNIETNANYNGNKLFDGSVASTTFQYGQNAATDAATVTNVNMSTFGTLTGTSVTSAANA 180
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ L + ++ + + +T + +
Sbjct: 181 TAAQAAIDTDLTSLKAARASLGAQQSGLASTINTLTSNNTALSAAKSTLIDTDYASETSN 240
Query: 239 F 239
Sbjct: 241 M 241
Score = 41.3 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 37/109 (33%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + + V ++ + + IDT +
Sbjct: 133 NKLFDGSVASTTFQYGQNAATDAATVTNVNMSTFGTLTGTSVTSAANATAAQAAIDTDLT 192
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
AA +G+ S + + + A+ L+D D ASE++ +
Sbjct: 193 SLKAARASLGAQQSGLASTINTLTSNNTALSAAKSTLIDTDYASETSNM 241
>gi|323490136|ref|ZP_08095356.1| flagellar hook-associated protein FlgL [Planococcus donghaensis
MPA1U2]
gi|323396184|gb|EGA89010.1| flagellar hook-associated protein FlgL [Planococcus donghaensis
MPA1U2]
Length = 293
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 3/143 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++ + + E +VSSG + +D+ S A +KS A
Sbjct: 10 QNSIRNMSQNLSRFEKTNSQVSSGKLLHRPSDDPNGVSKAMNLKSTLAANVQFERNTSES 69
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSS 127
+D + + M ++ G D ++I +EI +L Q+R +A
Sbjct: 70 KLWMDETGQNIDSMVSAMQRVRELAIQGNSDTYSELDRQAIDAEIGELTEQMRGLANAKV 129
Query: 128 FNGENWLRTDLGSSTASIAKSVI 150
+ G S +A +
Sbjct: 130 NGRSLFNGQKTGESPFPVAGNFE 152
Score = 55.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
VS +D I + + G+ +R+ E+ + ++ + R+ D D A RL +
Sbjct: 209 VSKVDAAIDRLLSVGAENGARQNRVEAVENRLLDSNLELQSMLSRVEDVDYAEAVIRLKS 268
Query: 425 LQTQQQLAVQALS 437
++ Q ++ A S
Sbjct: 269 EESVYQASLAATS 281
>gi|28974957|gb|AAO61415.1| flagellin [Ralstonia solanacearum]
Length = 240
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 67/176 (38%), Gaps = 3/176 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ +N S++ Q L L+ R+S+GLRV+ A D++A ++ + + + + +
Sbjct: 1 LSLNSNISSLQTQQALSQSQSALQKSLQRLSTGLRVNSAQDDSAAYAASSSLTTTLNSQT 60
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
+S + A + + + + + ++ D ++ E QL +
Sbjct: 61 QGIQNANGANSYLQTADSYLGQVENNLQRMRQLAVESNNGGLSAADQTNLDKEYQQLATA 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
++I +++NG + S+T ++ N + +
Sbjct: 121 NKNIETNANYNGNKLFDGSVASTTFQYGQNAATDAATVTNVNMSTFGTLTGTSVTS 176
Score = 40.1 bits (91), Expect = 0.71, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 36/108 (33%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + + V ++ + + IDT +
Sbjct: 133 NKLFDGSVASTTFQYGQNAATDAATVTNVNMSTFGTLTGTSVTSAANATAAQAAIDTDLT 192
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
AA +G+ S + + + A+ L+D D ASE++
Sbjct: 193 SLKAARASLGAQQSGLASTINTLTSNNTALSAAKSTLIDTDYASETSN 240
>gi|302037636|ref|YP_003797958.1| putative second flagellar hook-filament junction protein FlgL
[Candidatus Nitrospira defluvii]
gi|300605700|emb|CBK42033.1| putative Second flagellar hook-filament junction protein FlgL
[Candidatus Nitrospira defluvii]
Length = 296
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 61/180 (33%), Gaps = 3/180 (1%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
L+ + Q+++SS RV++ +D+ + + + KS + I G+++
Sbjct: 13 LGNLQRSRLQMLTSQEQISSQKRVTNPSDDPSAFGQIVLDKSALSQTTQWVRNINFGTAR 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
V+ A + + ++++ ++ +SI E+ QLQ QL +
Sbjct: 73 VNAADQALGQVQNLITRVRELTIQASSDTTSAEGRQSIAKEVRQLQRQLVQLGNTEVAGQ 132
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+ T +I ++ + + + + T T
Sbjct: 133 AIFGGTKTDVQPFTITSGDTVAYQGNSETQSIAVGENQTVQILVPGSSIFTGSTTNMFDS 192
Score = 48.2 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 35/78 (44%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
N + ++ + +D + G +G++++R+ + D + + K + DAD+
Sbjct: 203 NNRSGIQAGLGNLDLATAQISDVQGTVGALANRLQVTHDALDTATLTITKSISDNQDADL 262
Query: 416 ASESTRLSALQTQQQLAV 433
A+ T+L + Q A
Sbjct: 263 ATAITQLRLQEVAVQAAS 280
>gi|207110486|ref|ZP_03244648.1| flagellin A [Helicobacter pylori HPKX_438_CA4C1]
Length = 80
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 31/79 (39%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+K +GS+ +++ + I + + V+ ++ D D A ES + Q
Sbjct: 1 MKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKNNILAQS 60
Query: 432 AVQALSIVNNSTARILSLF 450
A+S N IL L
Sbjct: 61 GSYAMSQANTVQQNILRLL 79
>gi|84388098|ref|ZP_00990994.1| flagellar hook-associated protein [Vibrio splendidus 12B01]
gi|84377165|gb|EAP94035.1| flagellar hook-associated protein [Vibrio splendidus 12B01]
Length = 396
Score = 72.5 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/425 (10%), Positives = 106/425 (24%), Gaps = 59/425 (13%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
LR + Q +++SG ++ +D+ Q + + L SDAI L ++
Sbjct: 15 QNDLRRQENKIHHNQAQLASGKKLQSPSDDPLATHYLQNIGQQSEQLKQYSDAIVLVRNR 74
Query: 74 VDIAK---AGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
++ + + D ++ G D + + EI +L ++F
Sbjct: 75 LEHHEVLVSNTEGFADEAKRTVMEMINGALSPEDRLAKKREIQEL---------SNNFLH 125
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+ + G+ T + K F RD+ G V
Sbjct: 126 LANSQDESGNYTFAGTKPKNQPFFRDNQGNVSYQ-------------------------- 159
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
+ V + + + + + +
Sbjct: 160 ----------GDDYQRKMRVASSFEMAMNDPGSKLFMEIDNPFGDYEPQYELEPASELLL 209
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
A +T + + + + G I +
Sbjct: 210 ERATNSAEDGSTYKVTFVDMQTGNYAYQLEKDGAVVAAEDFDPSTGIVYEGLNIQIKGQI 269
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
++ T + + + + ++
Sbjct: 270 TKGDSITLEPRETFSIFDTFKEAAEQAENPVS-----------DASATAKLHQVTEEFHA 318
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
T A +G+ S + +QE + + ++ K D D + + Q
Sbjct: 319 AFIHLTKARTDVGARLSTLDIQEQQHEDFKLSLAKAKSNFEDLDYSKAIIEFNENSRALQ 378
Query: 431 LAVQA 435
+ QA
Sbjct: 379 ASQQA 383
>gi|73745746|gb|AAZ81997.1| flagellin subunit FliC [Clostridium difficile]
Length = 138
Score = 72.5 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 48/121 (39%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
TH + + + + +T + N D + A ++MVS +D +K
Sbjct: 18 THVAGTSNNNNEIKVALVNTSSIMSKAGITSSTIASLNVDGASGTDAAKQMVSSLDMALK 77
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ K+G+ +R+ ++ + + V R+ D D+ASE LS + Q +
Sbjct: 78 ELNTSRAKLGAQQNRLESTQNNLNNTIENVTAAESRIRDTDVASEMVNLSKMNILVQASQ 137
Query: 434 Q 434
Sbjct: 138 S 138
>gi|308071105|ref|YP_003872710.1| flagellin [Paenibacillus polymyxa E681]
gi|305860384|gb|ADM72172.1| Flagellin [Paenibacillus polymyxa E681]
Length = 302
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 50/134 (37%), Gaps = 3/134 (2%)
Query: 24 LEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSK 83
+ +++++S+G +++ +D+ + A +++ + S +D M +
Sbjct: 25 MGKMENQISTGRKLNKPSDDPVGVTYALRYRAELASNEQYKTNSDAAVSWLDFTDTTMQQ 84
Query: 84 AIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIARGSSFNGENWLRTDLGS 140
A DVM +K + S E+ QL+ Q+ +I + +
Sbjct: 85 AGDVMKRLKELTVQASSETLPQSGLDSIKLEVDQLKGQMMNIGNSQLRGKYVFNGQNYDQ 144
Query: 141 STASIAKSVIGSFI 154
+ ++ +V
Sbjct: 145 APYQLSATVTSYDQ 158
Score = 41.3 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 29/287 (10%), Positives = 83/287 (28%), Gaps = 4/287 (1%)
Query: 151 GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
G + + + + + + +
Sbjct: 8 GMTNMQLLSNLNRNNNNMGKMENQISTGRKLNKPSDDPVGVTYALRYRAELASNEQYKTN 67
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
DA+ + +G +K QA L + + G +
Sbjct: 68 SDAAVSWLDFTDTTMQQAGDVMKRLKELTVQASSETLPQSGLDSIKLEVDQLKGQMMNIG 127
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
S N D + + D + +T+
Sbjct: 128 NSQLRGKYVFNGQNYDQAPYQLSATVTSYDQINPDQGAVSYAVGDQDAFRVNTSGSDFFG 187
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
+ D+ + ++ + +N ++ + +S I+++ + ++G+ ++R+
Sbjct: 188 KSTDPDNVFKVIDALSSALSNGNST----VISSQLSSIESRFTKMQTSLSEVGARTNRVE 243
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
L + ++ + + DAD+AS + ++ QT + A+++ +
Sbjct: 244 LIQSRLEERNLNLTTLQAKTEDADVASLMIQATSAQTIYEAALKSSA 290
>gi|146281778|ref|YP_001171931.1| flagellar hook-associated protein FlgL [Pseudomonas stutzeri A1501]
gi|145569983|gb|ABP79089.1| flagellar hook-associated protein FlgL [Pseudomonas stutzeri A1501]
Length = 526
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/369 (9%), Positives = 88/369 (23%), Gaps = 10/369 (2%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ N+ Q ++SSG R+ AD+ + ++ L+ + ++ +
Sbjct: 17 QKGYANIVKTQQQISSGERIQTPADDPVGAARLLQLEQQQALLTQYQGNLTTATNSLSQE 76
Query: 78 KAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ ++ +++ + +G D SI SE+ Q+++QL + NG+
Sbjct: 77 EGILNSINNLLQKARELAVEAGSGALSDEDRSSIASELEQIENQLYALMNSKDANGQYLF 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
++LL + G + +
Sbjct: 137 AGSSS------GTQPYVKNPDGTYSYQGNQNSLSLQVSGSMLLSVNDSGWSVFENVVNAG 190
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ + D K
Sbjct: 191 RTTSALATNPNADGEQRVFLSAGLVVNDKTYDQQFRAGSPYTLELVSGSEFVIRDKDGTD 250
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
A + + I + + + + + + +T
Sbjct: 251 VTAEVSGGGAFDPEAIDGTTITFRGITLELDAQALSSDSSGDYDALLTGYSFEFGSTADT 310
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME-EMVSFIDTQIK 373
T S T ++ D+ + + + ++ T I
Sbjct: 311 FAISRTSSNTSTAQLSGGTITDTAAYNAAFPDSGVTFKFTSATDYEVFLQPLTATSTAIG 370
Query: 374 CATAAAGKI 382
+ +
Sbjct: 371 SGSLTGSTL 379
Score = 58.2 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 26/70 (37%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ +D I A IG+ + I + + + + D DMA + +L
Sbjct: 442 ALTNLDKGIAAVDATRSSIGARLNTIDILTTENESLSITNASTQSSIRDTDMAEATAKLL 501
Query: 424 ALQTQQQLAV 433
QT + A
Sbjct: 502 LQQTMLEAAQ 511
>gi|26991069|ref|NP_746494.1| flagellar hook-associated protein FlgL [Pseudomonas putida KT2440]
gi|24986103|gb|AAN69958.1|AE016634_7 flagellar hook-associated protein FlgL [Pseudomonas putida KT2440]
Length = 521
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/521 (9%), Positives = 127/521 (24%), Gaps = 79/521 (15%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T +++ NL + ++V+S R+ A D+ + +++ + L
Sbjct: 3 ISTAQFYETSATSYSQNYSNLAKITEQVTSKSRIQSAGDDPVGAARLLVLQQQSALLEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S + + + ++ +S D + D SI SEI ++++ +
Sbjct: 63 SGNMTTVKNALLQEESVLSTINDALQRASELAIQAGNGGLSDADRTSIASEIKEIEANVF 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ NG+ S+ + + + D ++ + D S
Sbjct: 123 GLLNSRDANGDYMFGGSKSSTPPYVRNADGTYSYQGDQTQLSLQVSDTLRLATNDTGYSI 182
Query: 181 TDGTERYGLLDRN---------------------------------HKIKVEPQVLKDID 207
D + + + +
Sbjct: 183 FDQATNNSRTQSSLVAPSPDDGKVLLSGGLLTSATTYGNQFAAGQPYSVTFTSATEYSVR 242
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
+ + + K K + + D + A A + + +
Sbjct: 243 DAAGNDITNETAGKGKFDVNTEGGKMISLRGVDFEINLNLAEGDDADAVVAGHVFTLEAK 302
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
+ + SA + ++ P + +
Sbjct: 303 PDTLTATRSAGNPSTAQVTGTSVTDPEAYRSTFPSNGAVIRFTSDTEYSLYAQPYSADSK 362
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKI----- 382
V + + ++ ++ + +
Sbjct: 363 PIGSGTVGAGNAVTVAGVTYQFDSAPKQGDQFSVNANTHRTQNVLDTLGQLRSALEKPLD 422
Query: 383 -----GSISSRIHLQEDFIKLMRD----------------------------AVEKGVGR 409
++ + + RD A +
Sbjct: 423 TPEAQAALKTATDSAISNLASARDRIDITRGSIGARGNSLDIQAQENESLGLANQSTQSA 482
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ D DMAS + +L+ Q + + A + ++ LSLF
Sbjct: 483 IGDTDMASATIQLTLQQAMLEASQLAFARISQ-----LSLF 518
>gi|332284026|ref|YP_004415937.1| flagellar hook-associated protein 3 [Pusillimonas sp. T7-7]
gi|330427979|gb|AEC19313.1| flagellar hook-associated protein 3 [Pusillimonas sp. T7-7]
Length = 412
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/423 (8%), Positives = 105/423 (24%), Gaps = 43/423 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + + +L + ++ SG R+ AD+ + A +
Sbjct: 3 ISSTLFFQTGLNSIHAQQSDLMHLYQQIGSGQRMVTPADDPLAAAQAINISQSQSLNQRF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
++ + S + I + ++ ++ +K ++ G D ++ + + ++ L
Sbjct: 63 AENRSVLSQNLGIEENTLNSVTTLLQDVKTRLIEAGNGTMSDADRATLSNVLANARTSLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + +G+ G+ + ++ D + + V D
Sbjct: 123 GLANATDGSGQYLFSGAQGNVKPFQEGANGIEYLGDQYQRNIQADQTRRIAGGDVGTDVF 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + T+ + + +
Sbjct: 183 NRAAPGSTGYLSRAEGANTGTAVVGSPAITDPRGEGVGYIYTIAFTSGADYTVSITDAQN 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + G + S S A+ ++ S +
Sbjct: 243 NLVSEYDGTGYVAGSTDHLDLQGGVQVAISGSPASGDKFVLEPVSATTDLNIFNTLDSI- 301
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ T+ + +
Sbjct: 302 ---------------------------------------IASLGDPTQSDAVNVAKFQNT 322
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + ID +G+ + I + + + ++ D D S +
Sbjct: 323 LGSAIQRIDVNYNNVLTVRASVGARMNEIDALDANGMQRALSYSNQLSKMEDVDYYSATA 382
Query: 421 RLS 423
+L
Sbjct: 383 QLQ 385
>gi|73745728|gb|AAZ81988.1| flagellin subunit FliC [Clostridium difficile]
gi|73745778|gb|AAZ82013.1| flagellin subunit FliC [Clostridium difficile]
Length = 138
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 48/124 (38%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
T+ T + + + +T + N D + A ++MVS +D
Sbjct: 15 NYGTNVAGTTNNNNEIKVALVNTSSIMSKAGITSSTIASLNVDGASGTDAAKQMVSSLDI 74
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+K + K+G+ +R+ ++ + + V R+ D D+ASE LS + Q
Sbjct: 75 ALKELNTSRAKLGAQQNRLESTQNNLNNTIENVTAAESRIRDTDVASEMVNLSKMNILVQ 134
Query: 431 LAVQ 434
+
Sbjct: 135 ASQS 138
>gi|296535169|ref|ZP_06897391.1| flagellin domain protein [Roseomonas cervicalis ATCC 49957]
gi|296264497|gb|EFH10900.1| flagellin domain protein [Roseomonas cervicalis ATCC 49957]
Length = 361
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 57/97 (58%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + ++ + + AA ++G+ S + Q + DA+E+G+G LVDAD
Sbjct: 265 VDAVMVDGVVLKTFTAVKESSNAAQNQLGNDSKFVSNQMTYNSARIDAMEEGLGSLVDAD 324
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+A ES RL+ALQTQQQLA ALS N++ +LSLFR
Sbjct: 325 LAKESARLTALQTQQQLATTALSTANSAPQVLLSLFR 361
Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/182 (20%), Positives = 76/182 (41%), Gaps = 4/182 (2%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S++TN A A Q L IN L+ Q +VS+G +VSDA D+ A +++AQ +++D L++
Sbjct: 4 SVITNSGAKVALQSLNKINQQLDTTQKKVSTGYKVSDAKDDGAAYAVAQKVRADVTGLNS 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVM----STIKNKITAGVERGTDSKSIQSEITQLQSQ 118
+D +G + + + + + S + K++ K + L Q
Sbjct: 64 ANDQLGGVNGLLTSTLKAVDTVSNTLATDVSNVLTKLSDSNLDAETRKQYTEQFKSLAKQ 123
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ + +S+NG L + A S + + T + + +
Sbjct: 124 MNTTLQDASYNGTRLLSSTATDPLTGNAYSGGSMAVTRNEKGQSYTVNESGATADQMSFT 183
Query: 179 SS 180
++
Sbjct: 184 AN 185
>gi|240145381|ref|ZP_04743982.1| flagellar hook-associated protein 3 [Roseburia intestinalis L1-82]
gi|257202502|gb|EEV00787.1| flagellar hook-associated protein 3 [Roseburia intestinalis L1-82]
gi|291539400|emb|CBL12511.1| flagellar hook-associated protein 3 [Roseburia intestinalis XB6B4]
Length = 533
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/262 (9%), Positives = 76/262 (29%), Gaps = 1/262 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA- 62
I N + S + N++ + ++++S ++ +D+ A ++S +
Sbjct: 5 ITNNIILHNTSININGNKGNVDTLNNQMTSQKKIQRPSDDPVTAIRALRLRSTLSEIDQY 64
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
I S +D+ + +S DV+ TI+ + G + + + ++ +TQL+ +
Sbjct: 65 YEKNIPDAESWLDVTETAISSMQDVIKTIRTQCEYGAQDSLTTDNRKTILTQLEKLRDKL 124
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ + + + + + + + +
Sbjct: 125 YSEGNADYAGRTVFTGYRTNKKLTFTEDEQKTSYEIDQKMSYADLQEHRYYGNDVTVPGN 184
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + ++ S+ T + + +G+ + + D
Sbjct: 185 QADVLDGTKIASPTQAAYNRIRLGYDSIDSLDVTDAAGTTTKTSANGSTVTISYNYTDTT 244
Query: 243 KGIATIPVPLPAAPAAPNTTSG 264
+
Sbjct: 245 GTTPVNKTGNMNVTVYDSYDKW 266
Score = 42.8 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 37/330 (11%), Positives = 89/330 (26%), Gaps = 2/330 (0%)
Query: 116 QSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
Q+ I G + G++T + A + + T ++ +
Sbjct: 199 QAAYNRIRLGYDSIDSLDVTDAAGTTTKTSANGSTVTISYNYTDTTGTTPVNKTGNMNVT 258
Query: 176 LLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST--KKFKLATTSGAWLK 233
+ DS E +++ I VL + + T S
Sbjct: 259 VYDSYDKWLEASTKTPKSYDIADGEAVLIRNTGEMVFSKTAADTLSTNKASLDISYTKTG 318
Query: 234 AANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATT 293
N + + + +
Sbjct: 319 FTNGELRPEYYYNCTNITDTNNKLKYEKYDKDGNQIYQDIDYVVAANQTLTVNTEASNVF 378
Query: 294 KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD 353
+ ++ D V + + V + ++ + + + +
Sbjct: 379 DHGLSRDVDELIDAVQRSLDAEQKVTDLNAMKKMQEYSSDDCQAKLEEWIAAAKKERDYA 438
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
N + + DT ++ A +GS + L ++ + ++ +E+ + D
Sbjct: 439 NDNMQKLYNSYIGNCDTYLQKVNLALTDVGSKGQSLALTKNRMSNEQETMEELKSKNEDR 498
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNST 443
+++ +A T Q ++QA S VN T
Sbjct: 499 ELSDIILEYTAAYTAYQSSLQAASKVNQVT 528
>gi|220932549|ref|YP_002509457.1| flagellar hook-associated protein 3 [Halothermothrix orenii H 168]
gi|219993859|gb|ACL70462.1| flagellar hook-associated protein 3 [Halothermothrix orenii H 168]
Length = 301
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 16/157 (10%), Positives = 43/157 (27%), Gaps = 3/157 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + L+ L+ ++++G + ++ + I+ S A
Sbjct: 3 ITNNIMVTNLKNYLQRGMKALDKYNKKLATGKEFTLPEEDPIATQRSMILHSALKANKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI---TAGVERGTDSKSIQSEITQLQSQLR 120
+ + ++ + DV+ + ++I EI +L L
Sbjct: 63 QRNVDHAQDWLLNTESALHDVNDVLQRAYQLAEHGANDTVSDEEREAIAQEIEELNQHLV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157
+A + + + +
Sbjct: 123 QLANTKVAGKYIFSGSATDTKAYVANYNSGTDTYTFT 159
Score = 49.7 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 20/247 (8%), Positives = 57/247 (23%)
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ + + + +
Sbjct: 31 ATGKEFTLPEEDPIATQRSMILHSALKANKQYQRNVDHAQDWLLNTESALHDVNDVLQRA 90
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ A+ A V A + + + +
Sbjct: 91 YQLAEHGANDTVSDEEREAIAQEIEELNQHLVQLANTKVAGKYIFSGSATDTKAYVANYN 150
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
S T + N + +++ + + + +
Sbjct: 151 SGTDTYTFTHYQGDNVSLTAEISPGVPVDYNISGEDVFGPNGELFNILENLRQNLKNDNR 210
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
A+E + ++ ++ IG+ ++R+ L ++ + + + + R DADMA
Sbjct: 211 DAIETRIGELEAEMDNIMKHFSIIGAKTNRLDLSKNRLSSEELNLNQLISRNEDADMAET 270
Query: 419 STRLSAL 425
L
Sbjct: 271 IMNLKMQ 277
>gi|238762347|ref|ZP_04623318.1| flagellin FlaA [Yersinia kristensenii ATCC 33638]
gi|238699332|gb|EEP92078.1| flagellin FlaA [Yersinia kristensenii ATCC 33638]
Length = 361
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/255 (9%), Positives = 63/255 (24%), Gaps = 3/255 (1%)
Query: 25 EVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKA 84
++S+GLR+ A D+AA IA + + + S+ ++ A ++ +
Sbjct: 3 NKSTSQLSTGLRILSAKDDAAGSQIAAGLNAAITGQNVALRNNSQSSAMLEAANGALAGS 62
Query: 85 IDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSS 141
+++ +K T D ++ +E L +L+ S+F T
Sbjct: 63 DGILNRMKELATQASNATNGVQDRAALNAEFASLGEELQSTLEKSTFGDGKLFATGGKLD 122
Query: 142 TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
+ ++ + T + ++T L + +
Sbjct: 123 GELVFQTGASAEDVIKIDISTQITDLRDTVSSAGTVGNTTATAGTIEKLLFDVEDTANTA 182
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
+ + +
Sbjct: 183 KAAVTAAQGAFDGAKATFDAAQKTFNAVGVAGQVAYDAAVVTWNTANGTYQGLVSDQAKA 242
Query: 262 TSGTSGSKSPSVAAS 276
+ K+
Sbjct: 243 DAAVEHLKTNDGRYK 257
Score = 54.0 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/360 (8%), Positives = 82/360 (22%)
Query: 91 IKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVI 150
+ + + + A A+
Sbjct: 2 YNKSTSQLSTGLRILSAKDDAAGSQIAAGLNAAITGQNVALRNNSQSSAMLEAANGALAG 61
Query: 151 GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
I + ++ + + ++ + L K L +
Sbjct: 62 SDGILNRMKELATQASNATNGVQDRAALNAEFASLGEELQSTLEKSTFGDGKLFATGGKL 121
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
+ + + + + A + +
Sbjct: 122 DGELVFQTGASAEDVIKIDISTQITDLRDTVSSAGTVGNTTATAGTIEKLLFDVEDTANT 181
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
A +A + A K + A V + T + +
Sbjct: 182 AKAAVTAAQGAFDGAKATFDAAQKTFNAVGVAGQVAYDAAVVTWNTANGTYQGLVSDQAK 241
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
++ + + N + + ++ + T I ++ + + +R+
Sbjct: 242 ADAAVEHLKTNDGRYKSGGLVGLDLNTADSAKVAITKLTTAINDYSSVTASLAAGINRLG 301
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D + MRD +++AD + ST + ++ALS + LF
Sbjct: 302 YSSDNLTNMRDGNMAAKDSIMNADAVAASTAQNTAMLLMNSGIKALSKNTQMGQMVAQLF 361
>gi|291520176|emb|CBK75397.1| Flagellin and related hook-associated proteins [Butyrivibrio
fibrisolvens 16/4]
Length = 546
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/326 (9%), Positives = 92/326 (28%), Gaps = 4/326 (1%)
Query: 6 TNHSAMS-ASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA-V 63
TN M+ AS + + +++S ++ +D+ + + + ++
Sbjct: 4 TNKMIMNNASSNINSTKEIVNTRNKQMTSQKKIDRPSDDPVVAVRSLRLSTTLSQVTQYY 63
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
S I +S +D+++ + +M+ + G +++ + ITQL++ + +
Sbjct: 64 SKNIPDATSWLDVSETSLINIRTLMTDCRTLSVKGTSDTYNAEDRSTMITQLEALQKQVF 123
Query: 124 R--GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ + +S ++ + R + ++ + + V +T
Sbjct: 124 AEGNADYAKRTVFTGYRTNSNLVFTENEKNTKYRINQTLSIEDHMEEHRYYDGVNAIPTT 183
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
L+ + + + + + S +
Sbjct: 184 AAEMVAPFLNPTDPAYTTINDMAQTNYYRVRLNYDLGNDTDTINKLSLKDGRGNTLADFS 243
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + SG + ++G + T +
Sbjct: 244 FFAAGAVEDDVETVVDTTTLASGGINLIVYKNETQWSQAQLGKKTVPDDTIIAIKETGEL 303
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDS 327
A + N + +D +
Sbjct: 304 ILGKQVAADLKNNNATIDIQYDKTGF 329
Score = 36.6 bits (82), Expect = 9.1, Method: Composition-based stats.
Identities = 33/341 (9%), Positives = 80/341 (23%), Gaps = 9/341 (2%)
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
I + + ++ + ++ + + +
Sbjct: 202 INDMAQTNYYRVRLNYDLGNDTDTINKLSLKDGRGNTLADFSFFAAGAVEDDVETVVDTT 261
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
+G + + L T + + ++ + QV D+ +
Sbjct: 262 TLASGGINLIVYKNETQWSQAQLGKKTVPDDTIIAIKETGELILGKQVAADLKNNNATID 321
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
F + D + +
Sbjct: 322 IQYDKTGFDEGELRPEYYYNCTKRLDPLDVNVPVTYTKFDENGKQIHFDIEYTVAANQTI 381
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ + I D V K H +D + + +E
Sbjct: 382 ---------VINTEASDVFNSDIQRDLTEMIDAVKKTIAAHDKLDELTRMKGETQYASEE 432
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ S I + A+ N + + + IDT + +G + L +
Sbjct: 433 YQNYISTWYDAIKKEADYFEDNLQKLFDTELGKIDTYYAKISLGITDLGCKKQSLDLTKK 492
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ R+ V+ D D++ +A T Q ++ A
Sbjct: 493 RVGDQRETVQSLQSTNDDLDLSQIIIDYTAAYTAYQASLTA 533
>gi|73745760|gb|AAZ82004.1| flagellin subunit FliC [Clostridium difficile]
Length = 138
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 47/121 (38%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T+ T + + + +T + N D + A ++MVS +D +K
Sbjct: 18 TNVAGTTNNNNEIKVALVNTSSIMSKAGITSSTIASLNVDGASGTDAAKQMVSSLDVALK 77
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ K+G+ R+ ++ + + V R+ D D+ASE LS + Q +
Sbjct: 78 ELNTSRAKLGAQQKRLESTQNNLNNTIENVTAAESRIRDTDVASEMVNLSKMNILVQASQ 137
Query: 434 Q 434
Sbjct: 138 S 138
>gi|207728365|ref|YP_002256759.1| flagellin (partial sequence n terminus) protein [Ralstonia
solanacearum MolK2]
gi|206591611|emb|CAQ57223.1| probable flagellin (partial sequence n terminus) protein [Ralstonia
solanacearum MolK2]
Length = 146
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 59/144 (40%), Gaps = 3/144 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ TN S++ Q L L+ R+S+GLRV+ A D++A ++ + + + + +
Sbjct: 3 LSLNTNISSLQTQQALSQSQSALQKSLQRLSTGLRVNSAQDDSAAYAASSSLTTTLNSQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
+S + A + + + + + ++ D ++ E QL +
Sbjct: 63 QGIQNANGANSYLQTADSYLGQVENNLQRMRQLAVESNNGGLSAADQTNLDKEYQQLATA 122
Query: 119 LRDIARGSSFNGENWLRTDLGSST 142
++I +++NG +
Sbjct: 123 NKNIETNANYNGNKLFDGSEAYTM 146
>gi|4760507|dbj|BAA77314.1| flagellin [Pseudomonas putida]
Length = 124
Score = 72.1 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 3/113 (2%)
Query: 44 AAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VE 100
AA I+ + + LS G S A+ M+ + ++M ++
Sbjct: 1 AAGLQISNRLTTQIKGLSVAVKNANDGISIAQTAEGAMATSGNIMQRMRELALQSANGSN 60
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
D S+Q E T L +L IA ++F G N L S+ + + S
Sbjct: 61 SDDDRASMQQEFTALSGELTRIANTTTFGGRNLLDGTFSGSSFQVGANSNESI 113
>gi|317153837|ref|YP_004121885.1| flagellar hook-associated protein 3 [Desulfovibrio aespoeensis
Aspo-2]
gi|316944088|gb|ADU63139.1| flagellar hook-associated protein 3 [Desulfovibrio aespoeensis
Aspo-2]
Length = 554
Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 16/246 (6%), Positives = 61/246 (24%), Gaps = 4/246 (1%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
L +L + + + +++ +D+ + + +L S+ I +
Sbjct: 15 NLNTSLTSLLDLNTQAQTQKKINKPSDDPTGMTRILDHRDTLRSLEQYSENISTAKGWLG 74
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+ + + +++ K + + Q+ +LR I +
Sbjct: 75 ASDEALRQISTLITRAKELAGQAATGTVSGDNRE----QVSYELRSIFEQMVGLANSEFE 130
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ + + + D+ + + +
Sbjct: 131 GKSLYAGQKVDGNAYEQIMWLTTNDTSFGNTDFTVLGSSDTTVLVQFYDTTGATAVGGNM 190
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+P + + + + F + + + + + + P +
Sbjct: 191 DLSDPNLGVRYSIDGGRSWQSDGAVSFAGGQANLSLPSSGTSVIFHSDATVKVNDPDDPS 250
Query: 256 PAAPNT 261
A
Sbjct: 251 VADGTW 256
Score = 54.7 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 41/123 (33%), Gaps = 3/123 (2%)
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
S + + D + + N + +++M+ +
Sbjct: 427 SSNGAPTMSITVQGSDEFSKNLFEVMGNLVAFAETNNQTGVQQMLENLTNAQSHIMNKLA 486
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL---AVQALS 437
+G +R+ + E+ + ++ E + + DAD++ T L Q + + +
Sbjct: 487 DVGGRENRLTVTENILTGLKFNEEALLSSIEDADVSELMTDLVQQQMVYEAVLRSTSMIM 546
Query: 438 IVN 440
+N
Sbjct: 547 QLN 549
>gi|163785038|ref|ZP_02179765.1| hypothetical protein HG1285_05495 [Hydrogenivirga sp. 128-5-R1-1]
gi|159879694|gb|EDP73471.1| hypothetical protein HG1285_05495 [Hydrogenivirga sp. 128-5-R1-1]
Length = 368
Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/369 (9%), Positives = 95/369 (25%), Gaps = 26/369 (7%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
L +++SSG ++ +DNA + + + +S + + + ++ A++ +
Sbjct: 21 NKLLKYTNQLSSGKKILQPSDNAIDSAKSLRLGKIIDDISTYNRNMDQVQAVLETAESTL 80
Query: 82 SKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSS 141
++V + I + G + + S + ++
Sbjct: 81 GNIVNVSQEARVHIIQVLNTGVMDAEDANILRD---------YFQSVRNYIIKQANVSVG 131
Query: 142 TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
+ I V + + P + ++ +T L + +
Sbjct: 132 NSRIFGGVNAQIDPFNTQGIYQGQTLETKVPISKGVELNTTFNGIDYLGTIKSGVWNDTN 191
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
++D++ + + + + G + L A +
Sbjct: 192 ADGNVDITEVSNKIGVVKALDDIIQIIDSGDIYKLHGYLSDMGYSNPNDALVGATESGTL 251
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
T T ++ + T+ K G + +
Sbjct: 252 TINYGSYTLNINYDGDTTTPNPSTLSELVNAINTDPTNKYVQAFVFQDKDGVYRLGLVAK 311
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
+ + ++ ++ D +AA +
Sbjct: 312 NDASIPITVSDSSGALSKRLG-----------------SVSSILETFDKGFNGVSAARSR 354
Query: 382 IGSISSRIH 390
IG+ S I
Sbjct: 355 IGTQMSVIE 363
>gi|86146148|ref|ZP_01064474.1| flagellar hook-associated protein [Vibrio sp. MED222]
gi|85836095|gb|EAQ54227.1| flagellar hook-associated protein [Vibrio sp. MED222]
Length = 396
Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/437 (11%), Positives = 111/437 (25%), Gaps = 59/437 (13%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T I + H+ S R + Q +++SG ++ A+D+ Q + + L
Sbjct: 3 TRISSFHNYQSVQNDFRRQENKVHHNQAQLASGKKLQSASDDPLATHYLQNIGQQSEQLK 62
Query: 62 AVSDAIGLGSSKVDIAK---AGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQ 118
DAI L ++++ + A D ++ G D + + EI +L +
Sbjct: 63 QYVDAITLIRNRLEHHEVMVANSEGFADEAKRTVMEMINGALSPEDRLAKKREIQELSNN 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L +A + G+ T S K F +D+ G V
Sbjct: 123 LLHLANTQD---------ESGNYTFSGTKPKSQPFFQDNEGNVSYQ-------------- 159
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ V +
Sbjct: 160 ----------------------GDDYQRKMRVATSFEMAMNDPGSKLFMEIDNPFGDYEP 197
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ + + + A ++T + + + + G +
Sbjct: 198 QYDLEPASELLLGRATNKADDSSTYKVTFVDMQTGKFAYQLEKDGEVVASEDFDPSKGVV 257
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ ++ T + + +
Sbjct: 258 YEGLNIQFKGQITKGDSITLEPRKTFSIFDTFKDTAEQAENPVSD-----------ASAT 306
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+ +M T A +G+ S + +QE + + ++ K D D +
Sbjct: 307 AKLHQMTEEFHAAFIHLTKARTDVGARLSTLDIQEQQHEDFKLSLAKAKSNFEDLDYSKA 366
Query: 419 STRLSALQTQQQLAVQA 435
+ Q + QA
Sbjct: 367 IIEFNENSRALQASQQA 383
>gi|315926992|gb|EFV06348.1| flagellin B [Campylobacter jejuni subsp. jejuni DFVF1099]
Length = 72
Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 31/72 (43%)
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
IGS+ +++ + + I + + V+ + D D A+ES S Q A+S
Sbjct: 1 ADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFAAESANFSKYNILAQSGSYAMSQA 60
Query: 440 NNSTARILSLFR 451
N +L L +
Sbjct: 61 NAVQQNVLKLLQ 72
>gi|163789662|ref|ZP_02184100.1| Flagellin-like protein [Carnobacterium sp. AT7]
gi|159875194|gb|EDP69260.1| Flagellin-like protein [Carnobacterium sp. AT7]
Length = 305
Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 46/134 (34%), Gaps = 2/134 (1%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ L N+ Q+++S+ VS +D+ S + + I
Sbjct: 13 LRNLSANTSNVMKYQNQLSTLKEVSKPSDDPLKVSKILDLNNSIIQNDQYKTTINDAIQW 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI--ARGSSFNGE 131
++ + +S A + M IK I + Q+ +++S+++ A ++F G
Sbjct: 73 TNVQDSALSSATESMQRIKTLIQYSANGTLSHEDRQANKAEIESEIQGTIDALNTNFGGR 132
Query: 132 NWLRTDLGSSTASI 145
+
Sbjct: 133 YVFAGMNTTEKPFS 146
Score = 44.3 bits (102), Expect = 0.035, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 35/80 (43%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
++ + ++S D +I+ + K GSI +R+ + + ++ + D D+
Sbjct: 213 DDTEGLSNLLSRADQEIENVVSNRSKTGSIFNRLTATLERNDSEKLNLKTMLSENQDIDL 272
Query: 416 ASESTRLSALQTQQQLAVQA 435
A + + + ++ Q A+
Sbjct: 273 AEKYMQFTMEKSAYQAALSM 292
>gi|218708811|ref|YP_002416432.1| flagellar hook-associated protein FlgL [Vibrio splendidus LGP32]
gi|218321830|emb|CAV17802.1| flagellar hook-associated protein FlgL [Vibrio splendidus LGP32]
Length = 396
Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/437 (11%), Positives = 110/437 (25%), Gaps = 59/437 (13%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T I + H+ S R + Q +++SG ++ A+D+ Q + + L
Sbjct: 3 TRISSFHNYQSVQNDFRRQENKVHHNQAQLASGKKLQSASDDPLATHYLQNIGQQSEQLK 62
Query: 62 AVSDAIGLGSSKVDIAK---AGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQ 118
DAI L ++++ + A D ++ G D + + EI +L +
Sbjct: 63 QYVDAITLIRNRLEHHEVMVANSEGFADEAKRTVMEMINGALSPEDRLAKKREIQELSNN 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L +A + G+ T S K F +D+ G V
Sbjct: 123 LLHLANTQD---------ESGNYTFSGTKPKSQPFFQDNEGNVSYQ-------------- 159
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ V +
Sbjct: 160 ----------------------GDDYQRKMRVATSFEMAMNDPGSKLFMEIDNPFGDYEP 197
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ + + + + +T + + + + G +
Sbjct: 198 QYDLEPASELLLGRATNKSEDGSTYKVTFVDMQTGKFAYQLEKDGEVVASEDFDPSKGVV 257
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ ++ T + + +
Sbjct: 258 YEGLNIQFKGQITKGDSITLEPRKTFSIFDTFKETAEQAENPVSD-----------ASAT 306
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+ +M T A +G+ S + +QE + + ++ K D D +
Sbjct: 307 AKLHQMTEEFHAAFIHLTKARTDVGARLSTLDIQEQQHEDFKLSLAKAKSNFEDLDYSKA 366
Query: 419 STRLSALQTQQQLAVQA 435
+ Q + QA
Sbjct: 367 IIEFNENSRALQASQQA 383
>gi|903606|gb|AAB03519.1| flagellin [Borrelia duttonii]
Length = 328
Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 32/93 (34%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ T +G+ +R+ + + + ++ ++
Sbjct: 235 SPVNVTTAVDANMSLTKIEDAIRMITDQRANLGAFPNRLESVKASTEYAIENLKASYAQI 294
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNST 443
DA M E S Q + ++ N
Sbjct: 295 KDATMTDEIVASSTNSILTQSXMAMIAQANQVP 327
Score = 64.8 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 42/129 (32%), Gaps = 3/129 (2%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
NL + +S G R++ A+D+ A +A+ + G S + G + +
Sbjct: 21 ANLSNTHETLSXGNRINRASDDGAGMGVAEKNTAQLGGXSXATRXPSGGITSLQTPDGKG 80
Query: 82 SKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ V + SIQ E L +++ I N + L
Sbjct: 81 AVGERVSVRLXELPAQSGXGTYSDGGRGSIQXEGGPLTDEIKRIPDQXQHNHMHMLSNRS 140
Query: 139 GSSTASIAK 147
+ A+
Sbjct: 141 AAEHVRTAE 149
>gi|288960387|ref|YP_003450727.1| flagellin domain-containing protein [Azospirillum sp. B510]
gi|288912695|dbj|BAI74183.1| flagellin domain-containing protein [Azospirillum sp. B510]
Length = 624
Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 52/327 (15%), Positives = 103/327 (31%)
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ S+ + ++ ++A + S + + T
Sbjct: 298 QTFSYTATSGDVATGQNAAKNVATQLKASIATAISSGTGRLNGKDVASATVGTSGTITLT 357
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ R+ + +S +SGTI + A + + + K
Sbjct: 358 GATTSGVVRDFTLTTGTTNALTKKISESFSSGTIVSFTVDRRLLEAANNQGNGVSTIEKK 417
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
I V G + A G + V A T S
Sbjct: 418 TNVQIQVTNSNGAQVTRDGMSDQGDGKLANGDQAFAFDSGTVHLDVDAKTIKQAASHNCS 477
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
N ++ + + D ++ + + + + + ++ +++
Sbjct: 478 ANIVTKQISDANSKNDITVQLNETNTNSITVNAVNLTTSGQGLKLDEAQNNWTDRADIDK 537
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
V+ +D +A+ + + + I +E+F K D + +G +L AD E L
Sbjct: 538 AVAGLDNAKATIRSASQSLSTNLNVITTRENFTKEFSDVLTEGASKLTLADQNEEGASLL 597
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLF 450
LQT+QQL ALS+ N S IL LF
Sbjct: 598 MLQTRQQLGTIALSLANQSQQSILRLF 624
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 94/290 (32%), Gaps = 7/290 (2%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+ +L+ + Q+ +S+G +V+ A D + A+ + G LS++ DA+G
Sbjct: 16 TNLLQLQSTQEQISKKQNILSTGNKVNTALDGPTAFFSAKGLNQRAGDLSSLKDAMGQSI 75
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKIT-------AGVERGTDSKSIQSEITQLQSQLRDIAR 124
S + A G++ ++ K T KS+ S+ L+ Q+ +A
Sbjct: 76 STIQAADKGLTAIDSMVDQAKGLTTAAYAALGNDAASIATRKSLASQFNTLRGQIDKLAA 135
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
S++ G+N + + S ++ A + I + + D + G
Sbjct: 136 DSNYGGKNLIAGNGLSMDSTSASRAAVNTIVGVDNARVTNVQAPDTYSIRIKGDGAVSGR 195
Query: 185 ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKG 244
+ +N ++ + ++ + S + T + + + +
Sbjct: 196 TQDINDAQNAHGLTGLKLSGTMSSTLGNFSNVQIEVRGANGRTRDFIVSDGSESRTISYF 255
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
+ + A + ++ S + T
Sbjct: 256 DNSQTMSSNLVSPAKSGSAQVSTVNVGGTVEEGDIFTVTVEGQTFSYTAT 305
>gi|73745726|gb|AAZ81987.1| flagellin subunit FliC [Clostridium difficile]
gi|73745758|gb|AAZ82003.1| flagellin subunit FliC [Clostridium difficile]
Length = 138
Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 48/121 (39%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T+ T + + + +T + N D + A ++MVS +D +K
Sbjct: 18 TNVAGTTNNNNEIKVALVNTSSIMSKAGITSSTIASLNVDGASGTDAAKQMVSSLDMALK 77
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ K+G+ +R+ ++ + + V R+ D D+ASE LS + Q +
Sbjct: 78 ELNTSRAKLGAQQNRLESTQNNLNNTIENVTAAESRIRDTDVASEMVNLSKMNILVQASQ 137
Query: 434 Q 434
Sbjct: 138 S 138
>gi|148980295|ref|ZP_01815982.1| flagellar hook-associated protein [Vibrionales bacterium SWAT-3]
gi|145961314|gb|EDK26624.1| flagellar hook-associated protein [Vibrionales bacterium SWAT-3]
Length = 294
Score = 71.7 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/208 (10%), Positives = 60/208 (28%), Gaps = 3/208 (1%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ L D N L V +++S+GLR++ +D+ + +K I S+
Sbjct: 13 QRSLMDNNIRLNKVFEQMSTGLRINHLSDDPIAAVRLEGLKKTVSDNQQYQRNIENVQSQ 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ + ++ + + + G I E+ L++++ + ++
Sbjct: 73 LTRYETNVNTLESLSQQVNELLLQGKNGTLDSESRAGIVLELKSLKTEMLNTLNQANEGS 132
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+ TD+ + A + D + S+
Sbjct: 133 YLFSGTDISNPAIDTAPPYTLNPNSDYRETKVGDNQYVPSNLTITDTIGSSAIFTDLDNA 192
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTIS 218
++ + + +
Sbjct: 193 ISELELATGGFTTALDNALNTNQALHQD 220
>gi|188583097|ref|YP_001926542.1| flagellin hook IN repeat protein [Methylobacterium populi BJ001]
gi|179346595|gb|ACB82007.1| flagellin hook IN repeat protein [Methylobacterium populi BJ001]
Length = 1562
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 57/378 (15%), Positives = 114/378 (30%)
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
+ +A ++ D T + S + Q+ + + +
Sbjct: 1185 LASTEASVAGISDPGQTSLISALGFKGGDSFSVNGQTVNLTATDTIGSLVQKVGAATNGA 1244
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
+ ++T + + S G T T ++ G
Sbjct: 1245 VTASYDATTNKFSFTAADSRTAVQLGDGSTATSKVSNLGFTATDFAAGAGQPSSQSALAG 1304
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
+ V+ + + A AT D G +I
Sbjct: 1305 KSLTVQVGSGTAMTTATVTFGTAPGQVSTLAQLNEALAPANAQATIDSLTGKISITTSND 1364
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+ + +G+ + ASA G + T N + S G
Sbjct: 1365 VGAQNLSIVANGTGNPFTTGTASANLGGDGLNARNNLVQTYNDLLKQMDQLASDAGFNGV 1424
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
D + + + ++ + + E A++++V I++
Sbjct: 1425 NLLSGDNLTINFNEKGTSQLKVQGSATSAASLGLSAVGQTNFQESSAIKKIVDQINSASS 1484
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ A +GS + + ++DF K + + ++ G L AD+ E+ AL T+ LA+
Sbjct: 1485 QLQSRAAALGSNLAVVQNRQDFTKQIINVLDTGAANLTSADLNEEAANSQALSTRNSLAI 1544
Query: 434 QALSIVNNSTARILSLFR 451
ALS+ N S IL L R
Sbjct: 1545 SALSLANQSQQGILQLLR 1562
Score = 64.4 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 50/116 (43%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+SI + + L+D L Q R+S+G +V+ A DN + A + S + LS
Sbjct: 3 SSITLSAATRQNLLSLQDTASLLATTQSRLSTGKKVNSALDNPINFFTANNLSSRSTELS 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQS 117
++ D I G + A G+SK + S +K+ + S + ++ S
Sbjct: 63 SLLDGISNGVQTIQAANTGLSKLQSLTSQLKSTAQQALAATNAFTSKAATVSTALS 118
>gi|15894912|ref|NP_348261.1| flagellin [Clostridium acetobutylicum ATCC 824]
gi|15024592|gb|AAK79601.1|AE007672_8 Flagellin [Clostridium acetobutylicum ATCC 824]
gi|325509049|gb|ADZ20685.1| Flagellin [Clostridium acetobutylicum EA 2018]
Length = 269
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 52/137 (37%), Gaps = 3/137 (2%)
Query: 19 DINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAK 78
I+ D++SSG ++ A+D+ + +I + + L + G S +
Sbjct: 18 SISTQRSKNADKMSSGSIMNKASDDCSGLAIYKNIHMRISGLEMANRNTQDGISIMQTID 77
Query: 79 AGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
G+ + IK + TD K IQ EI Q+++ + A+ S FNG L
Sbjct: 78 GGLQDTEKQLGRIKELAVRSLNGNLTDTDRKQIQLEINQIKNGIDSTAKDSEFNGIKILG 137
Query: 136 TDLGSSTASIAKSVIGS 152
D + +
Sbjct: 138 QDASIKIKVMDDPDVNF 154
Score = 50.9 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 30/95 (31%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + + +++ K G+ + + + + M + D +M
Sbjct: 174 TSIDSSNDALGQVNSAFDKINGYLVKNGAGQNNLQQISETLSNMSYNFNATESNINDTEM 233
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
AS + L Q S V + + LS+
Sbjct: 234 ASGQMEQTRLSMLQNATSAIFSQVTDISKESLSVL 268
>gi|4760521|dbj|BAA77321.1| flagellin [Pseudomonas putida]
Length = 208
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 49/162 (30%), Gaps = 3/162 (1%)
Query: 44 AAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT 103
AA IA M S L+ G S A+ M + +++ ++
Sbjct: 1 AAGLQIATRMTSQIRGLTMAIKNANDGISIAQTAEGAMQEQTNMLQRMRELALQARNDSN 60
Query: 104 ---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
D ++ E + S++ IA + NG+N L G T + + G
Sbjct: 61 SYKDRNALNGEYQAMLSEINRIAGNTELNGKNLLNGSAGEMTFQVGSNGGGGNQIKIKLD 120
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
V + + ++ D + + +
Sbjct: 121 VGMDSSATGALSALGQASATLSSASDTTAADYDIQFQTVITA 162
Score = 50.9 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 33/86 (38%)
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
S + ++ ++T A + + + +++ ID ++ +G+ +
Sbjct: 123 MDSSATGALSALGQASATLSSASDTTAADYDIQFQTVITAIDEALQNINTTRADLGAAQN 182
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDA 413
R+ + ++ + E GR+ D
Sbjct: 183 RLTSTINNLQNINGNAEAARGRVQDT 208
>gi|316932808|ref|YP_004107790.1| hypothetical protein Rpdx1_1435 [Rhodopseudomonas palustris DX-1]
gi|315600522|gb|ADU43057.1| protein of unknown function DUF1522 [Rhodopseudomonas palustris
DX-1]
Length = 887
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ A + ++ ++T + A GS S + ++++F K + + ++ G L AD
Sbjct: 793 DNAATNKTLAALNTASTTLRSQASSYGSNLSIVQIRQEFAKNLINVLQTGSSNLTLADTN 852
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV ALS+ N S +L L R
Sbjct: 853 EEAANSQALSTRQSIAVSALSLANQSQQSVLQLLR 887
Score = 64.4 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 46/110 (41%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M ++ + + L+ L Q+R++SG +V+ A DN + A + S +
Sbjct: 1 MADVVLSAAVRQNLLSLQSTADLLATTQNRLASGKKVNTALDNPTNFFTAAGLDSRASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS 110
+ + D IG G + A G++ ++ T K+ ++ + +
Sbjct: 61 NNLLDGIGNGVQILQAANTGITSLNKLIDTAKSIANQALQSNVGYSTKSN 110
>gi|4760525|dbj|BAA77323.1| flagellin [Pseudomonas putida]
Length = 200
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 56/179 (31%), Gaps = 3/179 (1%)
Query: 44 AAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVE 100
AA IA M S + G S A+ M + ++++ ++
Sbjct: 1 AAGLQIATRMTSQIRGQTMAIKNANDGISIAQTAEGAMQEQVNILQRMRELALQSRNDSN 60
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
+ S+ SE Q++ +L IA+ + NG+N L + T + G +
Sbjct: 61 DSDNRDSLNSEFAQMRDELTRIAQSTQLNGKNLLDGSASTMTFQVGSETGGINQISIDLT 120
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
+ D + + S + E + + + + ST
Sbjct: 121 GKYLASDLGITNAITIAGSDSATAETNFSAAMDAIDAAVKTIGEGRAALGAVQNRLTST 179
Score = 51.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 36/100 (36%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V +E+ ++ + N A +D+ + + ID +K
Sbjct: 101 MTFQVGSETGGINQISIDLTGKYLASDLGITNAITIAGSDSATAETNFSAAMDAIDAAVK 160
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+G++ +R+ + ++ + + + GR+ D
Sbjct: 161 TIGEGRAALGAVQNRLTSTINNLQNINENADAARGRVQDT 200
>gi|291534846|emb|CBL07958.1| flagellar hook-associated protein 3 [Roseburia intestinalis M50/1]
Length = 531
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/262 (8%), Positives = 76/262 (29%), Gaps = 1/262 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA- 62
I N + S + N++ + ++++S ++ +D+ A ++S +
Sbjct: 3 ITNNIILHNTSININGNKGNVDTLNNQMTSQKKIQRPSDDPVTAIRALRLRSTLSEIDQY 62
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
I S +D+ + ++ +V+ TI+ + G + + + ++ +TQL+ +
Sbjct: 63 YEKNIPDAESWLDVTETAITSMQEVIKTIRTQCEYGAQDSLTTDNRKTILTQLEKLRDKL 122
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ + + + + + + + +
Sbjct: 123 YSEGNADYAGRTVFTGYRTNKKLTFTEDEQKTSYEIDQKMSYADLQEHRYYGNDVTVPGN 182
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + ++ S+ T + + +G+ + + D
Sbjct: 183 QADVLDGTKIASPTQAAYNRIRLGYDSIDSLDVTDAAGTTTKTSANGSTVTISYNYTDTT 242
Query: 243 KGIATIPVPLPAAPAAPNTTSG 264
+
Sbjct: 243 GTTPVNKTGNMNVTVYDSYDKW 264
Score = 43.2 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 36/330 (10%), Positives = 88/330 (26%), Gaps = 2/330 (0%)
Query: 116 QSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
Q+ I G + G++T + A + + T ++ +
Sbjct: 197 QAAYNRIRLGYDSIDSLDVTDAAGTTTKTSANGSTVTISYNYTDTTGTTPVNKTGNMNVT 256
Query: 176 LLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST--KKFKLATTSGAWLK 233
+ DS E +++ I VL + + T +
Sbjct: 257 VYDSYDKWLEASTKTPKSYDIADGEAVLIRNTGEMVFSKTAADTLSTNKASLDIAYTKTG 316
Query: 234 AANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATT 293
N + + + +
Sbjct: 317 FTNGELRPEYYYNCTNITDTNNKLKYEKYDKDGNQIYQDIDYVVAANQTLTVNTEASNVF 376
Query: 294 KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD 353
+ ++ D V + + V + ++ + + + +
Sbjct: 377 DHGLSRDVDELIDAVQRSLDAEQKVTDLNAMKKMQEYSSDDCQAKLEEWIAAAEKERDYA 436
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
N + + DT + A +GS + L ++ + ++ +E+ + D
Sbjct: 437 NDNMQKLYNSYIGNCDTYLNKVNLALTDVGSKGQSLALTKNRMSNEQETMEELKSKNEDR 496
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNST 443
+++ +A T Q ++QA S VN T
Sbjct: 497 ELSDIILEYTAAYTAYQSSLQAASKVNQVT 526
>gi|312882652|ref|ZP_07742389.1| flagellar hook-associated protein FlgL [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369613|gb|EFP97128.1| flagellar hook-associated protein FlgL [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 397
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/422 (10%), Positives = 101/422 (23%), Gaps = 52/422 (12%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
LR + Q +++SG ++ A+D Q + L +DAIGL ++
Sbjct: 15 QNDLRRTESKVHHNQAQLASGKKLLKASDEPLATHYIQNIGQQKEQLRQYTDAIGLTRNR 74
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
++ + +S A + K + + + Q ++++IA F
Sbjct: 75 LEHEEVVISNAESYVDDAKRTVMEMINGALSPEDR----LAKQREIKEIANN--FLNLVN 128
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
++ + G+ + K F R+ + V DY L
Sbjct: 129 IQDETGNYIFAGTKPKNQPFFRNKDNDVSYAGDDYQRKMRISSSLVVPMNDPGSLLFMEI 188
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
+ + L ++ + + + + + V
Sbjct: 189 DNPFGDYKPLYNLQIESELLLEKATNSNPNDQSIYNVTFVEMPSGKFGYQLEKDGAVVQA 248
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+ +
Sbjct: 249 DT----------------------------------------------FDPSIGIQFGDV 262
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + + K S + + + ++
Sbjct: 263 SIQVKGQITKGDQITLEPRKTYSIFESFRESMEYAEGSVSDGSNTAQLHQVTEEFHNAFV 322
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +GS S + +QE + K D D A S + +
Sbjct: 323 HLNKARTDVGSRLSTLDIQEAQHDDFNMTLAKSKSIFEDLDYAEAIIEFSENSRALEASQ 382
Query: 434 QA 435
QA
Sbjct: 383 QA 384
>gi|301643530|ref|ZP_07243573.1| bacterial flagellin [Escherichia coli MS 146-1]
gi|301078081|gb|EFK92887.1| bacterial flagellin [Escherichia coli MS 146-1]
Length = 277
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/261 (12%), Positives = 78/261 (29%), Gaps = 3/261 (1%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
+R+++G R++ +AD+AA IA + + + + I ++ + A + + DV
Sbjct: 1 MERLATGNRINSSADDAAGKQIANRLTAQSSGMDVALSNINDATAMLQTADSMFDEMSDV 60
Query: 88 MSTIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ +K+ T ++Q E +L Q+ D+ + +++ G N S+T +
Sbjct: 61 LGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFGVSGTSNTGT 120
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ T++ T++ D S +
Sbjct: 121 DGLFQSAVTFQVGAESSDTMTVNISSQLNTLVTDLSAISNSFSADQADTTGTAGVSGGTE 180
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ T + + + L A+ + T +
Sbjct: 181 LTASGSANQMITSISTAMDDVSQIQSKLGASINRLNDTANNLTSMQDNTEVAIGNIMDTD 240
Query: 265 TSGSKSPSVAASATYIRMGNS 285
+ S
Sbjct: 241 YATEASNMTKQQVLMQTGITM 261
Score = 66.7 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ + D + A A + S +
Sbjct: 41 NDATAMLQTADSMFDEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQ 100
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ T + + + ++ TL +
Sbjct: 101 NTTYGGTNLFGVSGTSNTGTDGLFQSAVTFQVGAESSDTMTVNISSQLNTLVTDLSAISN 160
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
S T + + +M++ I T + + K+G+ +R++ +
Sbjct: 161 SFSADQADTTGTAGVSGGTELTASGSANQMITSISTAMDDVSQIQSKLGASINRLNDTAN 220
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ M+D E +G ++D D A+E++ ++ Q Q + L N+ ++ + SL +
Sbjct: 221 NLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVSSLLQ 277
>gi|207728366|ref|YP_002256760.1| flagellin (partial sequence c terminus) protein [Ralstonia
solanacearum MolK2]
gi|206591612|emb|CAQ57224.1| probable flagellin (partial sequence c terminus) protein [Ralstonia
solanacearum MolK2]
Length = 117
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 40/98 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ IDT + AA +G+ S + + + A+ L+D D
Sbjct: 20 VTSAANATAAQAAIDTDLTSLKAARASLGAQQSGLASTINTLTSNNTALSAAKSTLIDTD 79
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
A+E++ ++ QQ L+ N++ IL+L +G
Sbjct: 80 YAAETSNMTRQNILQQAGTAMLAQANSAPNSILNLLKG 117
>gi|149184214|ref|ZP_01862532.1| Flagellin, N-terminus [Erythrobacter sp. SD-21]
gi|148831534|gb|EDL49967.1| Flagellin, N-terminus [Erythrobacter sp. SD-21]
Length = 303
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 17/150 (11%), Positives = 51/150 (34%), Gaps = 3/150 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M ++ T +++++ + E +Q R+ +G R+ ++D+ + +++
Sbjct: 1 MINLSTGAFFERSTRQIGTLRSQAETLQQRIGTGERLERSSDDPVAAARLRMLARQERIG 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQS 117
+ L + + + + D++ ++ +I +EI L+
Sbjct: 61 DVDTRNSQLAEADLSLTDQALGSIADIVIRVRELAVQASSATLSDNQRSAIGTEIGSLRE 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAK 147
L ++ + G L
Sbjct: 121 NLVLLSNSRNIAGHALLGGKATGPAYVDGG 150
Score = 42.4 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 7/124 (5%)
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+ + V + A ++ +D ++ T A +G+ +
Sbjct: 182 FEFTTANGPTDLFAVLGGLAAALAAGGQTATEAGSAALADLDAGLEKVTTAQTVVGARLN 241
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS-IVNNSTARI 446
I L + ++ + + + + AD+A+ +RL T + + + + N
Sbjct: 242 WIDLMAERREITAERMAEERADVGGADIAATMSRLQETLTILEASQASFVRLAN------ 295
Query: 447 LSLF 450
LSLF
Sbjct: 296 LSLF 299
>gi|209884513|ref|YP_002288370.1| hypothetical protein OCAR_5373 [Oligotropha carboxidovorans OM5]
gi|209872709|gb|ACI92505.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 531
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + +++ +D + A +GS S + +++DF K + + ++ G L AD
Sbjct: 437 DNASANSVIANLDKASSTLRSQASALGSNLSIVQIRQDFSKNLINVLQTGSSNLTLADTN 496
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV AL++ N S +L L R
Sbjct: 497 EEAANSQALSTRQSIAVSALALANQSQQSVLQLLR 531
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/234 (13%), Positives = 74/234 (31%), Gaps = 1/234 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M++I+ + S L+ L Q+R+++G +V+ A DN + A + + +
Sbjct: 1 MSNIVLSASVRQNLLSLQSTADLLATTQNRLATGKKVNTALDNPTNYFTAASLDNRASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ-SQL 119
S + D IG G + A G++ ++ + K+ ++ S + + +
Sbjct: 61 SNLLDGIGNGVQVLQAANTGITSLQKLVDSAKSVANQALQAAVGYSSKSAISATITGATA 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
D+ +++ S + A + + T + V+
Sbjct: 121 EDLRGTPTYSDVAATAGSAIYSASGAAATTATVLSALTDATGGTTGTGLANNDTLVVNGK 180
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233
+ G L + D+ + + AT
Sbjct: 181 TITFQTGTGALTGSGDTWTMGIGTTVADLMTAIDTLQGGSATTSFATGQLTLHT 234
>gi|4760515|dbj|BAA77318.1| flagellin [Pseudomonas putida]
Length = 125
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 3/113 (2%)
Query: 44 AAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VE 100
AA I+ + + LS G S A+ M+ + ++M ++
Sbjct: 1 AAGLQISNRLTTQIKGLSVAVKNANDGISIAQTAEGAMATSGNIMQRMRELALQSANGSN 60
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
D S+Q E T L +L IA ++F G N L S+ + + S
Sbjct: 61 SDDDRASMQQEFTALSGELTRIANTTTFGGRNLLDGTFSGSSFQVGANSNESI 113
>gi|312142919|ref|YP_003994365.1| flagellin domain protein [Halanaerobium sp. 'sapolanicus']
gi|311903570|gb|ADQ14011.1| flagellin domain protein [Halanaerobium sp. 'sapolanicus']
Length = 236
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 410 LVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ DAD+A E +S Q Q L+ N I+ L
Sbjct: 195 IEDADIAKEMVSMSKQQILSQAGTAILAQANQIPQGIMQLI 235
>gi|4760519|dbj|BAA77320.1| flagellin [Pseudomonas putida]
Length = 202
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 37/114 (32%), Gaps = 3/114 (2%)
Query: 44 AAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVE 100
AA IA M S + S A+ M + +++ ++
Sbjct: 1 AAGLQIATRMTSQIRGQTMAIKNANDAISIAQTAEGAMQEQTNILQRMRELAVQSRNDSN 60
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
D +++ E + ++ IA + NG+N L G T + +
Sbjct: 61 STKDREALDKEFQSMLKEIDRIAASTQLNGKNLLDGTSGVMTFQVGSNTGSDNQ 114
Score = 50.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 22/54 (40%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+S ID ++ +G+ +R+ + ++ + + E GR+ D
Sbjct: 149 NYTAAMSAIDDALQAINTTRADLGAAQNRLTSTINNLQNINENAEAARGRVQDT 202
>gi|30721722|gb|AAP34192.1| FliC [Pseudomonas aeruginosa]
Length = 155
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 29/102 (28%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T S + + + + V ID IK
Sbjct: 54 TSAVSGVVIADTGSTGVGTAAGVAPSATAFAKTNDTVAKIDISTAKGAQSAVLVIDEAIK 113
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
A +G++ +R + +K + + V GR+ D D
Sbjct: 114 QIDAQRADLGAVQNRFDNTINNLKNIGENVSAARGRIEDTDF 155
>gi|90423001|ref|YP_531371.1| flagellin [Rhodopseudomonas palustris BisB18]
gi|90105015|gb|ABD87052.1| protein of unknown function DUF1522 [Rhodopseudomonas palustris
BisB18]
Length = 753
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 48/95 (50%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + + ++ ++ + A +GS S + +++DF K + + ++ G L AD
Sbjct: 659 DNNSANKTLAALNVASTALRSQASSLGSNLSIVQIRQDFAKNLINVLQTGSSNLTLADTN 718
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV AL++ N S +L L +
Sbjct: 719 EEAANSQALSTRQSIAVSALALANQSQQSVLKLLQ 753
Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 47/110 (42%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M++++ + S L+ L Q+R+SSG +V+ A DN + A + S +
Sbjct: 1 MSNVVLSASVRQNLLSLQSTADLLSTTQNRLSSGKKVNSALDNPTNFFTAAGLDSRASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS 110
+ + D IG G + A G++ ++ T K+ ++ +
Sbjct: 61 NNLLDGIGNGVQILQAASTGITSLNKLIDTAKSIANQALQTPVGYAPKSN 110
>gi|222834458|gb|EEE72935.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 16/189 (8%), Positives = 51/189 (26%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ + L VQ ++ +G R+ +D+ + A + + ++
Sbjct: 282 LASMNNQQSKLLYVQQQLGTGRRILTPSDDPVAATRALGVAQAQSVNGQYATTRKQANAS 341
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
+ + + + + I++ + S T LQ Q + ++ + N
Sbjct: 342 LGLEENTLQSVTTTIQNIQSLLVNAGNGTMSDTDRASLATALQGQYDQLMGLANADDGNG 401
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
G ++ + + G + + + ++ +
Sbjct: 402 NYLFAGLQANTVPFAKNAAGAAVYQGDNSHQLLQVDVARQMESGNTGAEVFMSVTTNAGY 461
Query: 194 HKIKVEPQV 202
Sbjct: 462 VLNGNAGNA 470
>gi|254994174|ref|ZP_05276364.1| flagellin [Listeria monocytogenes FSL J2-064]
Length = 93
Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 37/91 (40%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ +E ID I + +G+ SR+ + A + + DADMA+E
Sbjct: 1 SSQEATEAIDELINNISNGRALLGAGMSRLSYNVSNVNNQSIATKASASSIEDADMAAEM 60
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ ++ + Q ++ LS N + + L
Sbjct: 61 SEMTKYKILTQTSISMLSQANQTPQMLTQLI 91
>gi|114570836|ref|YP_757516.1| flagellin domain-containing protein [Maricaulis maris MCS10]
gi|114341298|gb|ABI66578.1| flagellin domain protein [Maricaulis maris MCS10]
Length = 282
Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ + A Q + + V DR+++GL+V A+DN W+ AQ+M+SDN +
Sbjct: 8 MASVNS------ALQHMSMLQSESAKVHDRIATGLKVGSASDNGTVWATAQVMRSDNESR 61
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQS 117
+ +I LG+ V+ A A D+M +++K+ A + D + S+ ++ +L +
Sbjct: 62 QSALTSIDLGTGVVETALAAAEGISDLMVEMQSKLVAATDTTLDEQSWRSLMTDFIELGN 121
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
Q +A +SFN N L + G + I K +
Sbjct: 122 QATRLAENASFNDLNLLESGGGDLSVLIGKDPSSTM 157
Score = 66.3 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 47/95 (49%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
V + + T+A ++G + +Q+ + D G+G LVDAD+
Sbjct: 188 ATQPTSADVVAFEASLVDVTSAVSRLGVGLRSLEIQKTLLVKQMDVTSAGIGNLVDADLG 247
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ES +L ALQ ++QL +QAL I N S IL+ F+
Sbjct: 248 RESAKLQALQVREQLGIQALEIANRSPRVILNFFQ 282
>gi|300936138|ref|ZP_07151077.1| bacterial flagellin [Escherichia coli MS 21-1]
gi|300458716|gb|EFK22209.1| bacterial flagellin [Escherichia coli MS 21-1]
Length = 277
Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/261 (12%), Positives = 79/261 (30%), Gaps = 3/261 (1%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
+R+++G R++ +AD+AA IA + + + + I ++ + A + + DV
Sbjct: 1 MERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFDEMSDV 60
Query: 88 MSTIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ +K+ T ++Q E +L Q+ D+ + +++ G N S+T +
Sbjct: 61 LGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFGVSGTSNTGT 120
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ T++ T++ D S+ +
Sbjct: 121 DGLFQSAVTFQVGAESSDTMTVNISSQLNTLVTDLSSISNSFSADQADTTGTAGVSGGTE 180
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ T + + + L A+ + T +
Sbjct: 181 LTASGSANQMITSISTAMDDVSQIQSKLGASINRLNDTANNLTSMQDNTEVAIGNIMDTD 240
Query: 265 TSGSKSPSVAASATYIRMGNS 285
+ S
Sbjct: 241 YATEASNMTKQQVLMQTGITM 261
Score = 67.1 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ + D + A A + S +
Sbjct: 41 NDATAMLQTADSMFDEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQ 100
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ T + + + ++ TL +
Sbjct: 101 NTTYGGTNLFGVSGTSNTGTDGLFQSAVTFQVGAESSDTMTVNISSQLNTLVTDLSSISN 160
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
S T + + +M++ I T + + K+G+ +R++ +
Sbjct: 161 SFSADQADTTGTAGVSGGTELTASGSANQMITSISTAMDDVSQIQSKLGASINRLNDTAN 220
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ M+D E +G ++D D A+E++ ++ Q Q + L N+ ++ + SL +
Sbjct: 221 NLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVSSLLQ 277
>gi|300817259|ref|ZP_07097477.1| bacterial flagellin [Escherichia coli MS 107-1]
gi|300899464|ref|ZP_07117712.1| bacterial flagellin [Escherichia coli MS 198-1]
gi|300356943|gb|EFJ72813.1| bacterial flagellin [Escherichia coli MS 198-1]
gi|300530235|gb|EFK51297.1| bacterial flagellin [Escherichia coli MS 107-1]
Length = 277
Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/261 (12%), Positives = 78/261 (29%), Gaps = 3/261 (1%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
+R+++G R++ +AD+AA IA + + + + I ++ + A + + DV
Sbjct: 1 MERLATGNRINSSADDAAGKQIANRLTAQSSGMGVALSNINDATAMLQTADSMFDEMSDV 60
Query: 88 MSTIKNKITAGVERGTDSK---SIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ +K+ T ++Q E +L Q+ D+ + +++ G N S+T +
Sbjct: 61 LGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQNTTYGGTNLFGVSGTSNTGT 120
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ T++ T++ D S +
Sbjct: 121 DGLFQSAVTFQVGAESSDTMTVNISSQLNTLVTDLSAISNSFSADQADTTGTAGVSGGTE 180
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
+ T + + + L A+ + T +
Sbjct: 181 LTASGSANQMITSISTAMDDVSQIQSKLGASINRLNDTANNLTSMQDNTEVAIGNIMDTD 240
Query: 265 TSGSKSPSVAASATYIRMGNS 285
+ S
Sbjct: 241 YATEASNMTKQQVLMQTGITM 261
Score = 67.1 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%)
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ + D + A A + S +
Sbjct: 41 NDATAMLQTADSMFDEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQQMSDMLQ 100
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+ T + + + ++ TL +
Sbjct: 101 NTTYGGTNLFGVSGTSNTGTDGLFQSAVTFQVGAESSDTMTVNISSQLNTLVTDLSAISN 160
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
S T + + +M++ I T + + K+G+ +R++ +
Sbjct: 161 SFSADQADTTGTAGVSGGTELTASGSANQMITSISTAMDDVSQIQSKLGASINRLNDTAN 220
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ M+D E +G ++D D A+E++ ++ Q Q + L N+ ++ + SL +
Sbjct: 221 NLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVSSLLQ 277
>gi|46934824|emb|CAF74789.1| flagellin gene flaA [Magnetospirillum gryphiswaldense MSR-1]
gi|144897698|emb|CAM74562.1| flagellin [Magnetospirillum gryphiswaldense MSR-1]
Length = 295
Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 51/96 (53%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
N + ++ +D+ I + A IG+ + + + DF K +A+++G +L AD+
Sbjct: 200 NSVSVFDAIIEKMDSAITTIRSNAKTIGTNVALLQTRSDFTKSYVNALKEGADKLSLADL 259
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E L ALQT+QQL +QALS +LSLFR
Sbjct: 260 NEEGANLVALQTRQQLGIQALSFAGQQEQGVLSLFR 295
Score = 62.5 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 64/173 (36%), Gaps = 1/173 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
S+ ++S S L + ++ R+S+GL+VS A D+A + ++ + L+
Sbjct: 4 SVTLSNSIRSNLLSLNQTSTMVQRTNSRLSTGLKVSSAIDDAVAYFQSKSLNDRASDLTT 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA-GVERGTDSKSIQSEITQLQSQLRD 121
D I G S + A + +M +K + + T+ + ++ L Q+ +
Sbjct: 64 RKDGIDQGISSLKSALTSLESQEKIMVQMKGLLLSAKSATNTERADLATQYQTLAKQVTN 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
+ +++ G N L + + T + + T
Sbjct: 124 LVNDANYQGLNLLNSTVAQLTVQFSDKTAAQLQVQGVDVRVTQLAGFTYGAAT 176
>gi|313200556|ref|YP_004039214.1| flagellar hook-associated protein 3 [Methylovorus sp. MP688]
gi|312439872|gb|ADQ83978.1| flagellar hook-associated protein 3 [Methylovorus sp. MP688]
Length = 301
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 65/196 (33%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN + K+ + +Q +VSSG R+ AD+ + A + S
Sbjct: 3 ISTNTIYQTGINKISALQSEQYKLQQQVSSGKRILTPADDPVGAARALTISQAQSINSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+D + S ++ ++ ++ D+M + K+ + S+ TQL + L+++
Sbjct: 63 ADNRAMASFNLNSIESTLTSVTDLMVSAKSTLVGAGNAVLSSEEKNYIATQLSNDLQELI 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N G + + + + Q+ + +
Sbjct: 123 GLANSKDGNGNYLFGGFKNTTQPYTATTTGATYNGDNGQMDMQVSDTRRMSTTENGPDVF 182
Query: 184 TERYGLLDRNHKIKVE 199
+ V+
Sbjct: 183 QAEGNDVFATLSNIVD 198
Score = 47.8 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 12/119 (10%), Positives = 34/119 (28%)
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + +++ + T + A+ + +D +
Sbjct: 173 STTENGPDVFQAEGNDVFATLSNIVDLLSNPATTSAALNTALASANTSLDKGLDNVLTVR 232
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
GS I ++ + + + D D A + ++ +T + A Q+
Sbjct: 233 ASTGSKLKEIDALDNNGDDRNLQYKAELSDIQDLDYAQALSDITKQKTILEAAQQSYVQ 291
>gi|73745730|gb|AAZ81989.1| flagellin subunit FliC [Clostridium difficile]
gi|73745734|gb|AAZ81991.1| flagellin subunit FliC [Clostridium difficile]
gi|73745740|gb|AAZ81994.1| flagellin subunit FliC [Clostridium difficile]
gi|73745742|gb|AAZ81995.1| flagellin subunit FliC [Clostridium difficile]
gi|73745748|gb|AAZ81998.1| flagellin subunit FliC [Clostridium difficile]
gi|73745750|gb|AAZ81999.1| flagellin subunit FliC [Clostridium difficile]
gi|73745756|gb|AAZ82002.1| flagellin subunit FliC [Clostridium difficile]
gi|73745772|gb|AAZ82010.1| flagellin subunit FliC [Clostridium difficile]
gi|73745776|gb|AAZ82012.1| flagellin subunit FliC [Clostridium difficile]
Length = 138
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 48/121 (39%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T+ + + + + +T + N D + A ++MVS +D +K
Sbjct: 18 TNVAGTSNNNNEIKVALVNTSSIMSKAGITSSTIASLNADGTSGTNAAKQMVSSLDVALK 77
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ K+G+ +R+ ++ + + V R+ D D+ASE LS + Q +
Sbjct: 78 ELNTSRAKLGAQQNRLESTQNNLNNTIENVTAAESRIRDTDVASEMVNLSKMNILVQASQ 137
Query: 434 Q 434
Sbjct: 138 S 138
>gi|27363698|ref|NP_759226.1| flagellar hook-associated protein FlgL [Vibrio vulnificus CMCP6]
gi|37679154|ref|NP_933763.1| flagellar hook-associated protein FlgL [Vibrio vulnificus YJ016]
gi|320157102|ref|YP_004189481.1| flagellar hook-associated protein FlgL [Vibrio vulnificus MO6-24/O]
gi|27359814|gb|AAO08753.1| flagellar hook-associated protein 3 [Vibrio vulnificus CMCP6]
gi|37197896|dbj|BAC93734.1| flagellar hook-associated protein FlgL [Vibrio vulnificus YJ016]
gi|319932414|gb|ADV87278.1| flagellar hook-associated protein FlgL [Vibrio vulnificus MO6-24/O]
Length = 397
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 48/423 (11%), Positives = 103/423 (24%), Gaps = 58/423 (13%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
LR + + Q +++SG ++ +D+ Q + + L DAI L ++
Sbjct: 15 QNDLRRMENKIHHNQAQLASGKKLLSPSDDPLATHYIQNIGQQSEQLKQYLDAIVLVRNR 74
Query: 74 VDIAK---AGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
++ + A + D ++ G D ++ + EI +L ++F
Sbjct: 75 LEQHEVNVANQEQFADEAKRTVMEMINGALSPEDRRAKRREIEEL---------ATNFLY 125
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+ + G+ T + K F RD +G V
Sbjct: 126 LANAQDESGNYTFAGTKPKSQPFFRDYDGTVTY--------------------------- 158
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
+ + ++ KL + +
Sbjct: 159 --------AGDDYQRKMRVSANLEMAMNDPGSKLFMDIPNPFGDYEPEYQLQNASELLLE 210
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
T + + + G+ I +
Sbjct: 211 KAVNEDYFDKATYRVTMVDMSNGRWGYQLEKDGSVVAADEFNPSTGIQYEDLTIQLKGQI 270
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ T E S S+ N + ++
Sbjct: 271 QKGDVIELKPRETFSIFDSFKNAEKYSEASVS-----------DANATAKLHQVTEEFHA 319
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
A IG+ S + +QE + ++ K D D + + Q
Sbjct: 320 AFIHLNKARTDIGARLSTLDIQEQQHEDFNLSLAKAKSNFEDLDYSKAIIEFNENSRALQ 379
Query: 431 LAV 433
+
Sbjct: 380 ASQ 382
>gi|240006898|gb|ACS38124.1| conserved hypothetical protein, putative flagellin protein
(fragment) [Methylobacterium extorquens AM1]
Length = 138
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 56/97 (57%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ ++ ++T I AT ++G+ + Q F+ + E+ +G LVDAD
Sbjct: 41 ASGAATLQAVIRDVETVIARATDTGARLGAGKLLVEGQRMFLDALVKTNERTIGALVDAD 100
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +E+TRL ALQ Q+ LA QAL+I N + IL+LF+
Sbjct: 101 IETEATRLKALQAQRDLAAQALNIANAAPQAILTLFQ 137
>gi|75675298|ref|YP_317719.1| hypothetical protein Nwi_1105 [Nitrobacter winogradskyi Nb-255]
gi|74420168|gb|ABA04367.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 536
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + +++ +D+ A +GS S + +++DF K + + ++ G L AD
Sbjct: 442 DNGSANSVIASLDSASITLRTQASTLGSNLSIVQIRQDFSKNLINVLQTGSSNLTLADTN 501
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV AL++ N S +L L R
Sbjct: 502 EEAANSQALATRQSIAVSALALANQSQQSVLQLLR 536
Score = 59.0 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 44/110 (40%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ + S L+ L Q R+++G V+ A DN + A + + +
Sbjct: 1 MSDIVLSASVRQNLLSLQSTADLLARTQHRLATGKNVNTALDNPTNYFTAAALDNRANDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS 110
S + D IG G + A G++ ++ T K+ ++ S
Sbjct: 61 SNLLDGIGNGVQVLQAANTGLTSLQKLVDTAKSIANQVLQSQVGYSQKSS 110
>gi|289811214|ref|ZP_06541843.1| flagellin [Salmonella enterica subsp. enterica serovar Typhi str.
AG3]
Length = 72
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN ++ L L +R+SSGLR++ A D+AA +IA ++ L+
Sbjct: 4 VINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQ 63
Query: 63 VSDAIGLGS 71
S G
Sbjct: 64 ASRNANDGI 72
>gi|86750909|ref|YP_487405.1| flagellin [Rhodopseudomonas palustris HaA2]
gi|86573937|gb|ABD08494.1| Protein of unknown function DUF1522 [Rhodopseudomonas palustris
HaA2]
Length = 886
Score = 70.9 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + + ++ ++T + A GS S + +++DF K + + ++ G L AD
Sbjct: 792 DNASTNKTLASLNTAATTLRSQASSYGSNLSIVQIRQDFAKNLINVLQTGSSNLTLADTN 851
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV AL++ N S +L L R
Sbjct: 852 EEAANSQALSTRQSIAVSALALANQSQQSVLQLLR 886
Score = 66.3 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/279 (12%), Positives = 81/279 (29%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ ++ + + L+ L Q+R++SG +V+ A DN + A + S +
Sbjct: 1 MSDVVLSAAVRQNLLSLQSTADLLSTTQNRLASGKKVNTALDNPTNFFTAAGLDSRASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + D I G + A G++ ++ T K+ ++ + + +
Sbjct: 61 NNLLDGISNGVQILQAANTGITSLNKLIDTAKSIANQALQSNVGYSTKSNVSATIAGATP 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
D RG+ +++ + + + G IT + +
Sbjct: 121 DDLRGTQTFASATATSNVVYDGTAGGTNGVSLTDTLGGGVGSITGTNITKAVAADATATG 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ +G I K T + A++ +
Sbjct: 181 GVLYTGTATATATSADLISSLTNGSTVTPTGPQAGDIIVVNGKNITFTTTGSATADSNGN 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
GI L A+ N + +
Sbjct: 241 YTIGINQPISALLASIDTINGNTSNPSVVDANGHIQLHT 279
>gi|157373200|ref|YP_001471800.1| flagellar hook-associated protein 3 [Shewanella sediminis HAW-EB3]
gi|157315574|gb|ABV34672.1| flagellar hook-associated protein 3 [Shewanella sediminis HAW-EB3]
Length = 305
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/193 (13%), Positives = 62/193 (32%), Gaps = 3/193 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + S L++ +L + + +S+G + +D+ + D A +
Sbjct: 3 VSTQNMYSSNLYNLQNTTSDLARLNEMMSTGKSLLRPSDDPIGSVKVIGSERDMAATNQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
I S+ A++ +S ++ S ++ A D + +E+ +L L
Sbjct: 63 LKNIESLSTSFGRAESNLSSMTELQSRMREITVAANNGSLSAEDRAAYAAEMNELLDALT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
D G +L + + + D + ++ P V
Sbjct: 123 DTINAKDEGGNYLFSGNLTDTPPISIDASGNYIYQGDASQREVQVSSSSWMPANVTAQEF 182
Query: 181 TDGTERYGLLDRN 193
+L++
Sbjct: 183 IFSNGSTDILNQT 195
>gi|295110885|emb|CBL27635.1| Flagellin and related hook-associated proteins [Synergistetes
bacterium SGP1]
Length = 1319
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 21/192 (10%), Positives = 65/192 (33%), Gaps = 3/192 (1%)
Query: 1 MTSILTNHSAMSAS-QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M S T+ + L+ N++ +Q ++++ + S+ ++N + S A ++S GA
Sbjct: 1 MYSRATSVGSYKTLLSSLQGNYRNIQNLQKQLATLKKYSNLSENPSAISRALELQSAIGA 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQL 119
+ + + A+ + + ++ I+ + + + Q+++
Sbjct: 61 NEDYKENGENAVALLKHAEGVLDQVLNAAKAIRTLVIQAGDAALSKSDREIIAKQIEANR 120
Query: 120 RDI--ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ I A + G+ + + R + +++ + +
Sbjct: 121 QTILDALNTKVAGQYLFGGTSTGEAPFVLNADGTLTYRGTDERIKYALSNVLTGDVSFTG 180
Query: 178 DSSTDGTERYGL 189
E+
Sbjct: 181 SEVLPNKEKAYF 192
Score = 42.0 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 36/330 (10%), Positives = 80/330 (24%), Gaps = 5/330 (1%)
Query: 110 SEITQLQSQLRDI-ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
SE ++ + + ++ + N+ LG I S D V + +
Sbjct: 983 SENDTVKDVMDRLRSQAKDWLYVNYFDAHLGQEGRQSGDYPILSIAAKDGSAVNVVDVKG 1042
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
+ + + L + G + ++ + E + T +
Sbjct: 1043 TIAKKHLGLSTGIQGEKDVSGMEWSV---GETEGSVFSITVAGYTHTIDMTAMRDVNGNG 1099
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
K AT + + L + ++ A M +
Sbjct: 1100 KMDAKDLVATINARMQDYDVKAELNDEGRLVLWSPRGYSIRAEVTKVKADGTPMTTAGDR 1159
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR 348
+ + + ++
Sbjct: 1160 TAEFFGGTASEVKTCYRGGYKLDDPANTRKPQGIFVQNTTNRSGANERKQNGYEMFGDVT 1219
Query: 349 HANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
A A N E M+ ID I + G++ +R D + + +
Sbjct: 1220 -AAVRAGNRTGLSEVMLPRIDAFIDNVLSVLSSNGAMQNRYKANMDRLTTENTLLTETHD 1278
Query: 409 RLVDADMASESTRLSALQTQQQLAVQALSI 438
L D A +T+L Q + ++
Sbjct: 1279 ELATVDPAEIATQLMMANYVYQSNLAVIAQ 1308
>gi|253998481|ref|YP_003050544.1| flagellar hook-associated protein FlgL [Methylovorus sp. SIP3-4]
gi|253985160|gb|ACT50017.1| flagellar hook-associated protein 3 [Methylovorus sp. SIP3-4]
Length = 301
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 65/196 (33%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN + K+ + +Q +VSSG R+ AD+ + A + S
Sbjct: 3 ISTNTIYQTGINKISALQSEQYKLQQQVSSGKRILTPADDPVGAARALTISQAQSINSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+D + S ++ ++ ++ D+M + K+ + S+ TQL + L+++
Sbjct: 63 ADNRAMASFNLNSIESTLTSVTDLMVSAKSTLVGAGNAVLSSEEKNYIATQLSNDLQELI 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N G + + + + Q+ + +
Sbjct: 123 GLANSKDGNGNYLFGGFKNTTQPYTATTTGATYNGDNGQMDMQVSDTRRMSTTENGPDVF 182
Query: 184 TERYGLLDRNHKIKVE 199
+ V+
Sbjct: 183 QAEGNDVFATLSNIVD 198
Score = 47.0 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 12/119 (10%), Positives = 34/119 (28%)
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + +++ + T + A+ + +D +
Sbjct: 173 STTENGPDVFQAEGNDVFATLSNIVDLLSNPATTSAALNTALASANTSLDKGMDNVLTVR 232
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
GS I ++ + + + D D A + ++ +T + A Q+
Sbjct: 233 ASTGSKLKEIDALDNNGDDRNLQYKAELSDIQDLDYAQALSDITKQKTILEAAQQSYVQ 291
>gi|83594190|ref|YP_427942.1| flagellin-like [Rhodospirillum rubrum ATCC 11170]
gi|83577104|gb|ABC23655.1| Flagellin-like [Rhodospirillum rubrum ATCC 11170]
Length = 289
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 59/135 (43%)
Query: 316 YYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCA 375
D + ++ S A+T ++ ++ ID+ +
Sbjct: 155 SASDRKLVIKGIASNVDGTSGISVSSAQNAAAGWADTTVSVYGGVIDNAINQIDSALTTV 214
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+A G+ +S + ++EDF + + +E G LV+AD+ ES + +L+T+QQL +
Sbjct: 215 RDSAQTFGTNASMLQIREDFTSTLINTLEGGAADLVNADLNKESANMLSLKTRQQLGTIS 274
Query: 436 LSIVNNSTARILSLF 450
LSI S +L LF
Sbjct: 275 LSIAQQSEQAVLRLF 289
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/222 (14%), Positives = 77/222 (34%), Gaps = 4/222 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
+I + S S L + QDR+S+G V+ A D+A + A+ + S L+
Sbjct: 4 NITLSSSTRSNLLALTRTTDLIGRTQDRLSTGKAVNSAIDDALSFFKARNLNSRATDLAT 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTI----KNKITAGVERGTDSKSIQSEITQLQSQ 118
+ + I G + A + DV+ + + T + S+ +L+SQ
Sbjct: 64 IKNGISEGIQVLKTATDALENVEDVLKQMKAIAASAKATASADSTTRAKLSSQFNELRSQ 123
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ + +++ G N +++ + T ++S S + + + +
Sbjct: 124 IDHLTNDANYGGVNLIKSGADTLTVKFSESPSASDRKLVIKGIASNVDGTSGISVSSAQN 183
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
++ + + Q+ + A +
Sbjct: 184 AAAGWADTTVSVYGGVIDNAINQIDSALTTVRDSAQTFGTNA 225
>gi|70729011|ref|YP_258745.1| flagellar hook-associated protein FlgL [Pseudomonas fluorescens
Pf-5]
gi|68343310|gb|AAY90916.1| flagellar hook-associated protein FlgL [Pseudomonas fluorescens
Pf-5]
Length = 522
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/365 (10%), Positives = 84/365 (23%), Gaps = 3/365 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ S++ + + + SS +RV AAD+ + + L
Sbjct: 3 ISTSQFYESSATNYQKNFSKVVQSSEEASSLVRVKTAADDPVGAARLLQLGQQASLLDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ + ++ M+ +V++ K + D ++ SE+ Q++ QL
Sbjct: 63 KTNTNSIKASLGQTESVMTSINNVLARAKELASGAGNAGYTDADRQANASELGQIEEQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ NG+ S D +Q+ D +
Sbjct: 123 SLMNSQDENGKYIFGGSKDDVPPFSRNSDGTYSYNGDQSSLQLPVGDTMMMAANSTGWDV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ +G +++ + +++
Sbjct: 183 FQQALNTSRSQVTMTAPAVDDGRISLSNGQVANNGAYNSQFRSGEPYTVSFVSGTQLKIV 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
G S + + T D
Sbjct: 243 DGSGNDVTAEASKGGVFGTAPNQTVSFRGVDLSLNVNLKSGDDANAVLPGHTFTLGSKPD 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ T + + + P N +A + K
Sbjct: 303 TFNVARSPGNPSMTQVSNTSITDPVAYNSTFPSGSAILKFTSATNFDLYAAPLTADSKPV 362
Query: 361 MEEMV 365
+V
Sbjct: 363 SSGVV 367
Score = 45.1 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 35/343 (10%), Positives = 80/343 (23%), Gaps = 1/343 (0%)
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
T Q + +SQ+ A + + ++ A ++ G
Sbjct: 170 TMMMAANSTGWDVFQQALNTSRSQVTMTAPAVDDGRISLSNGQVANNGAYNSQFRSGEPY 229
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
I + S V+ + ++ +
Sbjct: 230 TVSFVSGTQLKIVDGSGNDVTAEASKGGVFG-TAPNQTVSFRGVDLSLNVNLKSGDDANA 288
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ + + + T A + + S S +
Sbjct: 289 VLPGHTFTLGSKPDTFNVARSPGNPSMTQVSNTSITDPVAYNSTFPSGSAILKFTSATNF 348
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
+S + + T+ + + +
Sbjct: 349 DLYAAPLTADSKPVSSGVVGPGNVATAAGVSFTLTGAPSPAANDQFSVSVNTHETQNILD 408
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
S T + + ++ + + I + +G S + Q +
Sbjct: 409 TVSQLKNALNTPTAGNTLATQKQLADLASGMANLASGIDQLSIGISSVGGRGSALDTQTE 468
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+ + A K + D+D A TRL+ QT Q + A S
Sbjct: 469 INESLAAANTKTRSAISDSDPAEVMTRLTLQQTMLQASQLAFS 511
>gi|330875991|gb|EGH10140.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330967098|gb|EGH67358.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 530
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/361 (10%), Positives = 95/361 (26%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + + N+ + VSSG++++ A+D+ + + N L+
Sbjct: 3 ISTTQFYESTNTNYQRTYSNVLKTSEEVSSGIKLNTASDDPVGAARVLQLAQQNSMLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ IG ++ + ++ ++ +D M + + + ++ +L+ I
Sbjct: 63 ASNIGTINTNIVNSETALTSIVDTMQAAREVVVSAGNGAYTDSDRLAKAAELKQYQSQIL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ N GS +++ + +G + + +
Sbjct: 123 GLMNSQDANGQYIFAGSKSSAPPYAQNADGTYSYSGDQTSVNLAIGDGLVLPSNTTGHEA 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
E+ R + P + S + + T +
Sbjct: 183 FEQAVNTTRTSSTLLSPATDDGKVGLTGGQVTSTSAYNSGYQAGEPYTMTFLSGTQFKIT 242
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
V A+ A + + T ++ A T + ++ Y
Sbjct: 243 DATGTDVTTDASSAGKFNYASFADQTFTFRGVELTMNVNLSAAESATAATAATALTNRSY 302
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
++ + S S + + A +
Sbjct: 303 ELASTPDTVSASRSPGNTSAATISSSAVGNTTADRTAFNNTFPPNGAILKFTSATAYDLY 362
Query: 364 M 364
Sbjct: 363 A 363
Score = 39.0 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 56/455 (12%), Positives = 126/455 (27%), Gaps = 21/455 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRV-SSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I TN +++ L I ++ ++ V S+G +D A + + +S L
Sbjct: 68 TINTNI--VNSETALTSIVDTMQAAREVVVSAGNGAYTDSDRLAKAAELKQYQSQILGLM 125
Query: 62 AVSDAIGL---------GSSKVDIAKAGM----SKAIDVMSTIKNKITAGVERGTDSKSI 108
DA G A + ++ + G ++
Sbjct: 126 NSQDANGQYIFAGSKSSAPPYAQNADGTYSYSGDQTSVNLAIGDGLVLPSNTTGHEAFEQ 185
Query: 109 QSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
T+ S L A G + S+ S ++ + +G T
Sbjct: 186 AVNTTRTSSTLLSPATDDGKVGLTGGQVTSTSAYNSGYQAGEPYTMTFLSGTQFKITDAT 245
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
D T + + + + A+ + + +
Sbjct: 246 GTDVTTDASSAGKFNYASFADQTFTFRGVELTMNVNLSAAESATAATAATALTNRSYELA 305
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
+ + ATI A T + + ++ +
Sbjct: 306 STPDTVSASRSPGNTSAATISSSAVGNTTADRTAFNNTFPPNGAILKFTSATAYDLYASP 365
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR--KDLPKEIDSGYSMVTLNI 346
V +++K + + + + V T + I + + +
Sbjct: 366 VTSSSKPVSSGTLTGSTANASGVNFTVSGTPAAGDQFVVESGTHQTENILNTLTAAIKAL 425
Query: 347 TRHANTDAYNEKL---AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
+ + + + A+ + I + I A+ A G+ Q +L++
Sbjct: 426 STPVDGNLVASQKLDAALGSALGNIASSIDQASTARSAGGARQLAATAQGTTNELLKGNN 485
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
G V+AD+ +TRL+ +T + Q
Sbjct: 486 TVEQGTYVNADIVEATTRLTLQKTMLDASQQVFVQ 520
>gi|157959895|ref|YP_001499929.1| flagellar hook-associated protein 3 [Shewanella pealeana ATCC
700345]
gi|157844895|gb|ABV85394.1| flagellar hook-associated protein 3 [Shewanella pealeana ATCC
700345]
Length = 305
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/202 (10%), Positives = 59/202 (29%), Gaps = 4/202 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M + N A + Q L++ ++ + + +++G + +D+ + D A
Sbjct: 1 MRVSMHNLYA-NNLQSLQNSTVDIARLNEMMATGSSILRPSDDPIGAVKVMGNERDMAAT 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
SS A+ MS +++ + ++ + D + +E+ +L
Sbjct: 60 EQYLKNTESLSSSFGRAETYMSSMVELQNRMREITVSASNGSLSAEDRTAYAAELEELLE 119
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
D+ G + + + + D ++ T
Sbjct: 120 SFSDVLNAKDEGGNYLFSGNETDTPPIGKDAAGNYVYQGDTSHREVQTSSSSWMTANSTA 179
Query: 178 DSSTDGTERYGLLDRNHKIKVE 199
+L++
Sbjct: 180 ADFIFSNGSADILNQTKDFIDA 201
>gi|293605010|ref|ZP_06687406.1| flagellar hook-associated protein 3 [Achromobacter piechaudii ATCC
43553]
gi|292816615|gb|EFF75700.1| flagellar hook-associated protein 3 [Achromobacter piechaudii ATCC
43553]
Length = 420
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/432 (9%), Positives = 103/432 (23%), Gaps = 28/432 (6%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + + ++ + ++V SG + AD+ S++ + S
Sbjct: 3 LSTTMMYSNGLSGVLSQESDMNRLVEQVGSGRKFLTPADDPLSASLSIGVAQTKSMNSTY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + ++ ++ Q+ T L+S +
Sbjct: 63 GLNRDTAMTNLGQESNVLDSITTALQDVRTRVIQAGNGTFADSDRQALSTALKSARDALL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N G + S + +G TI + D D
Sbjct: 123 GLANSTDGNGQYLFSGYQGGVVPYSQDTNGKIVYSGATGERTIQVDQSRQLSTSDLGIDV 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
R + + S + + A N +
Sbjct: 183 FSRANPGSQAYVSTAANANTGTAQFSTVSVTPGSANIGKNFQIQFEADPATGNMGYRVTT 242
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
P+P + T ++ ++ + +
Sbjct: 243 TDPNANPPVPPVVTPTPPAAPTQYTEGAAIDFGGVSVVVKG------------------- 283
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+D +S + + N +LA
Sbjct: 284 -------TPANGDVIDVQSVQTADLDMFTTLDSLIKVLDSPIAGDEVALAKLNNELA--T 334
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ A +G+ + + + K + L D D + +++L+
Sbjct: 335 ANKKLSNNYDNVLTVAASVGARMNELEALDATGTKKGLTYSKTLSDLEDLDYFAGASQLA 394
Query: 424 ALQTQQQLAVQA 435
+ + A A
Sbjct: 395 MRKVALEAASSA 406
>gi|291526820|emb|CBK92406.1| Flagellin and related hook-associated proteins [Eubacterium rectale
M104/1]
Length = 510
Score = 70.5 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/375 (8%), Positives = 98/375 (26%), Gaps = 2/375 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + + ++ ++++ ++S A+++ + + + L
Sbjct: 3 ITNNMIMGNTKTNINSTKVLVDKYNTQMTTQKKISKASEDPVIAIRSLRLSTSLSHLDQY 62
Query: 64 SD-AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
D I SS +D+ + +S +++ I+ + G + + + QL + L +
Sbjct: 63 KDNNIPDASSWMDVTQTALSNMKSLLTDIRTQCVNGSTDTLTADVRNTILQQLTA-LSEQ 121
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
G T+S + + T +
Sbjct: 122 VYTEGNADYAGRTVFTGYRTSSKLTFQKDTKSTYQITQEFSAADLSEKRYYTNGVTVPNS 181
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ ++ + D +I K+ T + ++ +
Sbjct: 182 INAATPDCTTDVTEHSFQRIRLGYGNTTDDVKLSIDGKELTPGTDYTVYKSVSDFDPSKL 241
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
T + + + + ++ + +SD ++
Sbjct: 242 SADDTAYIQETGEFVFGKNVAASIKNNEKKLSVTYVKTGFDSSDARPEYYYNCKDITNAV 301
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
++ + + + + + +IT + +
Sbjct: 302 TLDAGGNVPHDAAGDIIYSDPSKVVDFKFSSQEIKYTVANSTDITVNTQAKDVMDTGIKR 361
Query: 363 EMVSFIDTQIKCATA 377
++ ID A
Sbjct: 362 DVDELIDVVQNAVNA 376
>gi|301168513|emb|CBW28103.1| putative flagellar hook-associated protein 3 [Bacteriovorax marinus
SJ]
Length = 332
Score = 70.5 bits (170), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/192 (13%), Positives = 60/192 (31%), Gaps = 3/192 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ + N S+ + + L LE +Q + ++ +S +DN A + S+
Sbjct: 1 MSRVSENSSSAALNFSLGKAKSKLEDLQMKGATLKDISRPSDNPISNVEALSITSNMSDN 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQS 117
+++ + + + D++ K + K+I +E+ QL++
Sbjct: 61 KQYQRNADYALLHLNVTEKSLEQLTDLLVKAKEIAISQSSDFYNADVRKNIANEVNQLRN 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
IA + + +A G + + L+ +
Sbjct: 121 LALSIANKRVGQKYIFSGYSTLTQPFDVAGKYNGDKGHTTVEVAKDFFLPLNLNGHEIFY 180
Query: 178 DSSTDGTERYGL 189
S +
Sbjct: 181 SSDDTSDKNIHP 192
>gi|182412214|ref|YP_001817280.1| flagellar hook-associated protein 3 [Opitutus terrae PB90-1]
gi|177839428|gb|ACB73680.1| flagellar hook-associated protein 3 [Opitutus terrae PB90-1]
Length = 294
Score = 70.2 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 65/185 (35%), Gaps = 2/185 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +N ++ ++++ ++ N +Q +V SG R+++ D+ A ++S+ L+
Sbjct: 3 IASNTASEVMLRQIQQLSANQSKLQQQVGSGRRITNPEDDPAAVGRVLTLQSEQRRLAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV--ERGTDSKSIQSEITQLQSQLRD 121
+ A +G+ + T G + E++Q+ Q
Sbjct: 63 EANANRALTLSQTAYSGLKGLKQISDRANELATLGTGAMSSDQMNAYAIEVSQMVEQALQ 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
A S N + TD+ + I + ++ I + T ++
Sbjct: 123 HANSQSGNDYVFAGTDVSNKPFEINTTTGLVEYGGNSDGAPIQLSEATTVVATTSGSTNE 182
Query: 182 DGTER 186
D +
Sbjct: 183 DIADM 187
>gi|291526375|emb|CBK91962.1| Flagellin and related hook-associated proteins [Eubacterium rectale
DSM 17629]
Length = 510
Score = 70.2 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/375 (8%), Positives = 98/375 (26%), Gaps = 2/375 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + + ++ ++++ ++S A+++ + + + L
Sbjct: 3 ITNNMIMGNTKTNINSTKVLVDKYNTQMTTQKKISKASEDPVIAIRSLRLSTSLSHLDQY 62
Query: 64 SD-AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
D I SS +D+ + +S +++ I+ + G + + + QL + L +
Sbjct: 63 KDNNIPDASSWMDVTQTALSNMKSLLTDIRTQCVNGSTDTLTADVRNTILQQLTA-LSEQ 121
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
G T+S + + T +
Sbjct: 122 VYTEGNADYAGRTVFTGYRTSSKLTFQKDTKSTYQITQEFSAADLSEKRYYTNGVTVPNS 181
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ ++ + D +I K+ T + ++ +
Sbjct: 182 INAATPDCTTDVTEHSFQRIRLGYGNTTDDVKLSIDGKELTQGTDYTVYKSVSDFDPSKL 241
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
T + + + + ++ + +SD ++
Sbjct: 242 SADDTAYIQETGEFVFGKNVAASIKNNEKKLSVTYVKTGFDSSDARPEYYYNCKDITNAV 301
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
++ + + + + + +IT + +
Sbjct: 302 TLDAGGNVPHDAAGDIIYSDPSKVVDFKFSSQEIKYTVANSTDITVNTQAKDVMDTGIKR 361
Query: 363 EMVSFIDTQIKCATA 377
++ ID A
Sbjct: 362 DVDELIDVVQNAVNA 376
>gi|91976844|ref|YP_569503.1| flagellin [Rhodopseudomonas palustris BisB5]
gi|91683300|gb|ABE39602.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 737
Score = 70.2 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 49/95 (51%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ +++S ++T + A +GS S + ++DF K + + ++ G L AD
Sbjct: 643 DNANTNKVLSSLNTASSTLRSQASALGSNLSIVQTRQDFSKNLINVLQTGSSNLTLADTN 702
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV ALS+ N+S +L L R
Sbjct: 703 EEAANSQALSTRQSIAVSALSLANSSQQSVLQLLR 737
Score = 64.8 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 46/101 (45%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ +++ L+ L Q R+SSG +V+ A DN + A + S + +
Sbjct: 1 MSGIVLSNAVRQNLSSLQATADLLATTQSRLSSGKKVNSALDNPTNFFTAASLDSRSSDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER 101
+ + D IG G + A G+S ++ + K+ ++
Sbjct: 61 NNLLDGIGNGIQIIQAANTGISSLTKLVDSAKSIANQALQS 101
>gi|46394808|gb|AAS91573.1| flagellin subunit E [Vibrio fischeri ES114]
Length = 80
Score = 70.2 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
++ TN SAM+A + L + +R+SSG +++ A D+AA I+ + +
Sbjct: 24 TVNTNVSAMTAQRYLNSATDGVNQSMERLSSGSKINSAKDDAAGLQISNRLNTQTRG 80
>gi|239817150|ref|YP_002946060.1| flagellar hook-associated protein FlgL [Variovorax paradoxus S110]
gi|239803727|gb|ACS20794.1| flagellar hook-associated protein 3 [Variovorax paradoxus S110]
Length = 403
Score = 70.2 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 48/434 (11%), Positives = 101/434 (23%), Gaps = 44/434 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + L L +Q ++++G + AAD+ + A + +
Sbjct: 3 ISTQSFYAQSMSSLGSQQQQLFRIQQQLAAGTKFLTAADDPVAAARALGVSQSMAESAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + A +M +K S T LQ L +
Sbjct: 63 ATSRSRAMLSLSQEETALKSATSIMQNMKTLAVQAGNGTLSDADRASLATTLQGNLDQLV 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ + N G + S + G + + + D
Sbjct: 123 NVANADDGNGQFLFAGFKSGSQPFVAGAAGGIQYMGDQGQRLMQVDVSRQMSTTDDGRSV 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + +V + +
Sbjct: 183 FQSVQGGAGYVSSAGAANTGSGVFGAVGVTDAGAANYGKDFVISFSGGNYTVATQETPPV 242
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
A+ AA + SG+ + R +D++
Sbjct: 243 VAASGAYVPGAAISFGGLQITMSGAPADGDTFQVATARNAGTDVF--------------- 287
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
I + + + + ++ + A+
Sbjct: 288 -----------------------------AAIGELVTALRQPLAGNGDSAKADLLNALST 318
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
I IGS + I + + + LVD D AS +
Sbjct: 319 FNVKITHAHDNVLTVMSSIGSRMNEIDALDTSGASRGLTDKAYLSELVDLDPASAISEFL 378
Query: 424 ALQTQQQLAVQALS 437
QT Q Q +
Sbjct: 379 QRQTSLQATQQTFA 392
>gi|194015752|ref|ZP_03054368.1| flagellar hook-associated protein 3 [Bacillus pumilus ATCC 7061]
gi|194013156|gb|EDW22722.1| flagellar hook-associated protein 3 [Bacillus pumilus ATCC 7061]
Length = 303
Score = 70.2 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 21/176 (11%), Positives = 65/176 (36%), Gaps = 4/176 (2%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
+ ++ + + L + ++ +G R + +D+ + + +
Sbjct: 7 MISQNSLRNISKSYEKLSKINEQAQTGRRFTKTSDDPVAAVKSLQYSTAMFRNDQYQKNL 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIAR 124
+ +D ++ +++ ID+MS +++K+ + + + EI Q++ Q+ D A
Sbjct: 67 NEAQNWIDTSETSVTEIIDIMSNVRDKVLDAANGTKQPEDLAAVGVEIGQMKKQIID-AM 125
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ G+ + + + +N + D T+ ++S+
Sbjct: 126 NTQMLGKFVFNGTNTNVKPVVENADGTFTFNFENYTDANSVKSNISDGITLNVNSN 181
Score = 46.7 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 21/181 (11%), Positives = 50/181 (27%)
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
AA + + ++ G + T + N T A
Sbjct: 108 AAVGVEIGQMKKQIIDAMNTQMLGKFVFNGTNTNVKPVVENADGTFTFNFENYTDANSVK 167
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
++ + + V +T N+ ++ + ID +
Sbjct: 168 SNISDGITLNVNSNPISAFGGQTASGQNVIEMLTDLENSLKNGTFANSDDALGSIDQFKE 227
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+A +G+ S+R+ L + + ++ D + L +T + A+
Sbjct: 228 VMSAERSDLGARSNRVDLVGSRLTSQFEVLKNAKSDNEDVESEKAIIDLLQQETVNRAAL 287
Query: 434 Q 434
Sbjct: 288 A 288
>gi|149911695|ref|ZP_01900303.1| putative flagellar synthesis; flagellar regulon;
hook-associatedprotein [Moritella sp. PE36]
gi|149805225|gb|EDM65242.1| putative flagellar synthesis; flagellar regulon;
hook-associatedprotein [Moritella sp. PE36]
Length = 411
Score = 70.2 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/423 (9%), Positives = 107/423 (25%), Gaps = 42/423 (9%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N + Q + L +++S + +AD+ A S + + + +
Sbjct: 6 NQIFTRSMQDMSKSQQRLNTAHTQITSLNKYKTSADSPADVSKSTYLNDEINKNTQYQKN 65
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KSIQSEITQLQSQLRDIA 123
+ S + + +A +S M + + +I +EI ++Q ++ ++
Sbjct: 66 SLMLKSTLGLEEATLSNIHTAMERGRVLTIRALNGSVGELDLNAIATEINEVQKEIFNLV 125
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ NG++ + + + N + I +
Sbjct: 126 NTKNANGDHIFSGSASEVQSYTWDANKAQYNFQGNEQDNKIQIASNVFIRNGDNGREVFE 185
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ L+ + + + + + + + +
Sbjct: 186 SAPARLIALSDNLVGNVSAAEVRIIDQGEYDNFHRDNYDYAMPANNIFKITVSPPTIPGN 245
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + +A SAT G+ DI +
Sbjct: 246 SDTYTITDSGNNVQQSGNFMSDNIIRFGGMAMSATGASPGSVDIIL-------------- 291
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
E + + + + +
Sbjct: 292 -------------------------APSINENILNTLEAFKKVLTDTSITKSEFQDGIAD 326
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
I + IG ++ I + + + ++ + L + D+A+ T L+
Sbjct: 327 AQLGIGNAKHAVMSVISSIGGRNNAIERITESNESFKLINQEAMAILTETDLAAAMTDLT 386
Query: 424 ALQ 426
Q
Sbjct: 387 KEQ 389
>gi|262404533|ref|ZP_06081088.1| flagellar hook-associated protein FlgL [Vibrio sp. RC586]
gi|262349565|gb|EEY98703.1| flagellar hook-associated protein FlgL [Vibrio sp. RC586]
Length = 397
Score = 70.2 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 45/430 (10%), Positives = 102/430 (23%), Gaps = 54/430 (12%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N+ A+ +R + Q +++SG ++ A+DN Q + L D
Sbjct: 9 HNYQAV--QNDIRRQESKVFNNQAQLASGKKLLSASDNPLATHYIQNVGQQEEQLRQYLD 66
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
AI L ++++ + +S + + K + + + + LQ
Sbjct: 67 AIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQE------MA 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S+F ++ + G+ + K F RD+ G V
Sbjct: 121 SNFLNLANVQDESGNYIFAGTKPKNQPFFRDNQGNVSYA--------------------- 159
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
D L G
Sbjct: 160 -------------------------GDDYQRKMKISNSLEIPFNNPGSKVFMEIPNPFGS 194
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
L + S + + + + S
Sbjct: 195 YEPNYTLQEGSELLLERAVNLNPDDTSAYRVTFVDMPDGKNGYQLERNGSVVQSGEFDPK 254
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + + + + + + ++V
Sbjct: 255 TGIQFAELNIQVKGQITKGDAIDLTPRDTYSVFDTFRDAIRYAEGSVSDASNTAKLHQIV 314
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
T IG+ + + +QE+ + + ++ K D D A +
Sbjct: 315 EEFHTAFIHLNKTRTDIGARLNTLDIQEEQHEDFKISLAKSKSTFEDLDYADAVIEFNEN 374
Query: 426 QTQQQLAVQA 435
+ + +A
Sbjct: 375 SRALEASQKA 384
>gi|186477705|ref|YP_001859175.1| flagellar hook-associated protein FlgL [Burkholderia phymatum
STM815]
gi|184194164|gb|ACC72129.1| flagellar hook-associated protein 3 [Burkholderia phymatum STM815]
Length = 406
Score = 70.2 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 49/434 (11%), Positives = 104/434 (23%), Gaps = 43/434 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ Q + D L + ++SSG+ ++ +DN + A + LS
Sbjct: 3 ISTSQYFGMNVQTMDDQQSTLAQLYQQLSSGVSLATPSDNPVGAAQAVQLSMQGATLSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + +S V++TI + + + TQLQ +
Sbjct: 63 ASNQNTALQALQSEDGSLSSVNTVLTTINTLLVRAGDGSLNDGDRGDIATQLQGIRSQLM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ + + + I + T + G
Sbjct: 123 GLANGTD---GSGNYLYAGYQASTPPFSVDASGAVQYNGDNGIQHVQVTGTRNIAIGDTG 179
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + V + + +
Sbjct: 180 RDVFLGISPAGSSPVTAGNSSNTGSGTIGNVSVSNPTDPTNQHKYTINFTSTTTYTITDV 239
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
AT P A T G + + S
Sbjct: 240 TAATTSAPQTYAAGQAITLGGGGQNVTISG------------------------------ 269
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
D+ S T ++ + + L + N A+
Sbjct: 270 ----------APNAGDSFSVTPAAQSSTDVFANLDKVIAALQTSVSGAGGQANLTNALGT 319
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ + + T+ +G I + + + L D+ S ++ +
Sbjct: 320 AMTQLHNTMNNVTSIQTSVGGREQEIEALQTVTQTNSLQTSSNLADLTQTDLTSTISKYT 379
Query: 424 ALQTQQQLAVQALS 437
Q Q A Q S
Sbjct: 380 MTQFSLQAAQQGFS 393
>gi|32473855|ref|NP_866849.1| flagellar hook-associated protein 3 [Rhodopirellula baltica SH 1]
gi|32444391|emb|CAD74390.1| probable flagellar hook-associated protein 3 [Rhodopirellula
baltica SH 1]
Length = 651
Score = 70.2 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 44/140 (31%), Gaps = 7/140 (5%)
Query: 4 ILTNHSAMSASQK-----LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNG 58
+ TN ++ + L ++ D++S+G RV +D+ A S A ++
Sbjct: 6 VATNRTSTPLQNQRLMFQLNSDQLAIQRQYDQLSTGRRVLSISDDPAAASRAIGLQRGVS 65
Query: 59 ALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQ 118
+ + A ++K + + + ++ ++ Q
Sbjct: 66 RTDQLVRNASAAEAFYQSADVTLNKVDTAIIEARGAAVEAAQSVLSDDQREALAMTIRQQ 125
Query: 119 LRDI--ARGSSFNGENWLRT 136
+ I A F L
Sbjct: 126 MEQIVSAGNGMFTDHQLLGG 145
Score = 37.4 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 30/68 (44%)
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ +D + +T G++G S + ++ ++ + +DAD+A + L A
Sbjct: 569 ARLDEDLDDSTRTRGRVGVWHSALQDSRTAVENENVLLQSQLSDAMDADLAVVISELQAR 628
Query: 426 QTQQQLAV 433
Q + ++
Sbjct: 629 QVALEASM 636
>gi|307945677|ref|ZP_07661013.1| flagellin domain-containing protein [Roseibium sp. TrichSKD4]
gi|307771550|gb|EFO30775.1| flagellin domain-containing protein [Roseibium sp. TrichSKD4]
Length = 387
Score = 70.2 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/279 (13%), Positives = 86/279 (30%), Gaps = 2/279 (0%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
+ S L+ + + VQ+R+++G +V+ A DN + A+ +++ LS + D
Sbjct: 9 SAVRSNLNALQATSQLMSTVQERLATGKKVNSALDNPNSFFTAKGLENRANDLSTLLDDQ 68
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT--DSKSIQSEITQLQSQLRDIARG 125
G + A G+S +++ K K ++ + + +E +L +Q+ D+A+
Sbjct: 69 GQAIQTLKAADKGISAISELVDAAKAKANQALQTSNIGEREQYATEYNELLTQIEDLAKD 128
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+ + G+N L + L + + +
Sbjct: 129 AGYKGKNLLGGTGNDLNVVFNEDGTSDLDITAIDYTDTANGPLSLSELSNSSGGTATFSL 188
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
+ V D S D +T + L +
Sbjct: 189 NNDGATGAPALTGGQLVTLDDAFSAGDTLTITNTAGEETKIEITDTLTVSQLETAIGNTS 248
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGN 284
+ +T KS + + ++
Sbjct: 249 TDTTASYASGTLTITSTDEAVQIKSDNASFNSGNTLQAG 287
Score = 67.1 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 50/94 (53%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+++ +++ + + + A G+ S + +EDF K M + + +G G+L AD
Sbjct: 294 ADSSIDTVLTSLKSAQDTLRSQASTFGTNLSIVQNREDFTKDMINTLSEGAGKLTLADTN 353
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
E L ALQTQQ LA +LS+ + ++ +L LF
Sbjct: 354 EEGANLLALQTQQSLASTSLSLASQASQNVLRLF 387
>gi|238028841|ref|YP_002913072.1| flagellar hook-associated protein FlgL [Burkholderia glumae BGR1]
gi|237878035|gb|ACR30368.1| Flagellar hook-associated protein 3 [Burkholderia glumae BGR1]
Length = 409
Score = 70.2 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 49/451 (10%), Positives = 107/451 (23%), Gaps = 50/451 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ + + + L + +V+SG + AAD+ + A + + + L+
Sbjct: 3 ISTSQFYTQNIELMNNQQSQLSELYQQVASGNTLLTAADDPLGAAQAVQLSASSATLAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLR 120
S S + + +S +V++ + G +D ++ +++ + L
Sbjct: 63 SSNQSSALSSLQLEDKTLSSVTNVLNAVIPSLSGAINGTLSDSDRSALAAQLQGQRDTLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G + G D G+ + D
Sbjct: 123 QLANTTDGTGNYLFAGLQSGNQPFTNSPSGGVMFSGDTGQRTVQLSDSVSVAIGDSGARV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G L ++ + F + T +
Sbjct: 183 FTSVPALGSLSVPASNPSNTGTGTIGVITGGTPGDPTNNHAFTVTFGGTTGAPTYTVTDN 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A +A + S + + +
Sbjct: 243 ATTPPTVGTAQTYTAGSAISIGSQSMIISGNPAPGDSFTLTPATQAGGDM---------- 292
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
A
Sbjct: 293 --------------------------------IGALDAAIAALKQPVGSGAAAGATLNNA 320
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ++ + + T +G + + + + L A+M + T
Sbjct: 321 LSTALTKMQNAVANVTTVQASVGGREQEVKSMQTITSTNSLQITNSLTDLTQANMPAAIT 380
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+L +Q A QA S V LSLF+
Sbjct: 381 QLLQVQNSLTAAQQAFSKVQG-----LSLFQ 406
>gi|325995396|gb|ADZ50801.1| Flagellin [Helicobacter pylori 2018]
Length = 105
Score = 70.2 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 49/100 (49%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +A+++ N +L +++SSGLR++ AAD+++ +IA ++S + L
Sbjct: 5 INTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQA 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT 103
V A M + I ++ TIK K ++ G
Sbjct: 65 IRNANDAIGMVQTADKAMDEQIKILDTIKTKAVKPLKTGK 104
>gi|288957558|ref|YP_003447899.1| flagellin [Azospirillum sp. B510]
gi|288909866|dbj|BAI71355.1| flagellin [Azospirillum sp. B510]
Length = 620
Score = 70.2 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 71/204 (34%)
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
I V G + A G + V A T S N
Sbjct: 417 QIQVTNSNGAQVTRDGMNDRGDGKLNGGEQAFTFDSGTVRLDVDAKTIKQAASHNCSANI 476
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
++ + + D + + S + +++ ++ +++ V+
Sbjct: 477 VTKQISDANTSNDITVQLNERNTNSITVTAVNLSTSGQGLKLDGAQNSWMDRADIDKAVA 536
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+D +A+ + + + I +E F K D + +G +L AD E L LQ
Sbjct: 537 GLDNAKSTIRSASQSLSTNLNIITTRETFTKEFSDVLTEGASKLTLADQNEEGASLLMLQ 596
Query: 427 TQQQLAVQALSIVNNSTARILSLF 450
T+QQL ALS+ N S IL LF
Sbjct: 597 TRQQLGTIALSLANQSQQSILRLF 620
Score = 63.6 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 1 MTSILTNHSAMSA-SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M +T +AM +L+ + Q+ +S+G +++ A D + A+ + G
Sbjct: 1 MAGNVTLTAAMRTNLLQLQGTQEQINKKQNILSTGNKINSALDGPTSFFAAKGLNQRAGD 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT-------AGVERGTDSKSIQSEI 112
LS++ DA+G S + A G++ ++ K T KS+ ++
Sbjct: 61 LSSLKDAMGQSISTIQAADKGLTAIDSLVDQAKGLTTAAYAALGNDAASIATRKSLATQF 120
Query: 113 TQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
L+ Q+ +A S+F G+N + + S ++ A
Sbjct: 121 NTLRDQIDKLAADSNFGGKNLINGNGMSMDSTSAS 155
>gi|305433256|ref|ZP_07402410.1| flagellin [Campylobacter coli JV20]
gi|304443683|gb|EFM36342.1| flagellin [Campylobacter coli JV20]
Length = 74
Score = 70.2 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 32/70 (45%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A++A L+ R+SSGLR++ AAD+A+ +IA ++S L
Sbjct: 5 INTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQA 64
Query: 64 SDAIGLGSSK 73
+
Sbjct: 65 INNGNDAIGI 74
>gi|87306350|ref|ZP_01088497.1| probable flagellar hook-associated protein 3 [Blastopirellula
marina DSM 3645]
gi|87290529|gb|EAQ82416.1| probable flagellar hook-associated protein 3 [Blastopirellula
marina DSM 3645]
Length = 1243
Score = 70.2 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 61/170 (35%), Gaps = 2/170 (1%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+L NL +Q+++S+G R+ +D+A ++S + +S + S
Sbjct: 22 LSQLAASQANLFSLQNQLSTGRRLLAPSDDAPAAIRGITLQSLIERKTQISVNLSTSQSY 81
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIAR--GSSFNGE 131
+ M+ A D+++ ++ V+ + + LQ+ L+ F G
Sbjct: 82 LAATDTAMAGAADLLAEMRGLAVTMVDSTATDTEVAAASQTLQNALQQFVDIGNRQFRGR 141
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
++T K + + + N + ID D ++
Sbjct: 142 FLFGGSNTTTTPFTIKDGLVQYNGNTNSLNSFSDIDLLFDTTVNGNEAFG 191
Score = 44.3 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 36/336 (10%), Positives = 92/336 (27%), Gaps = 8/336 (2%)
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ G++FN + ++ + + + T +
Sbjct: 910 QISANLPGTTFNNVQIEFVNSAAAGDQAIVNYDPNTKKLTIDVDPAATTANTVIAAINAE 969
Query: 178 DSSTDGTERYGLLDRNHK---IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ + T N + ++ + + DA ++ F +
Sbjct: 970 GTFSADTAMESDPTNNGEGLIVQTGVIASTNGGTPIADAEPAAASVSFAMPEDLNTAFTL 1029
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
+ A I A +P + + + T
Sbjct: 1030 ESLYPGTAHNDVRIVFNDTLASGSPTAVYNSGSKTLTLSIDAGVTTTEEIINAINLEGTF 1089
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA 354
+S + V + V T S V + +
Sbjct: 1090 HSQLDRSVDITNDGTGVVSATGTVGTTSGGTAEVMTGKDANPRETKSVFNTLIKLNEAIV 1149
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + + +V +DT + + + G++G+ S + L + ++ + + ++ D
Sbjct: 1150 TRDYVQISRLVDSLDTDLSRLSFSRGELGARSQNVDLMKTRLEDDMVELNANLSTEIEVD 1209
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
++ +A Q Q ++Q + + LSL
Sbjct: 1210 FVKAASDFAAQQASYQASLQTIGQIYQ-----LSLL 1240
>gi|4760523|dbj|BAA77322.1| flagellin [Pseudomonas putida]
Length = 201
Score = 70.2 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/193 (11%), Positives = 52/193 (26%), Gaps = 3/193 (1%)
Query: 44 AAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVE 100
AA IA M S + S A+ M + +++ ++
Sbjct: 1 AAGLQIATRMTSQIRGQTMAIKNANDAISIAQTAEGAMQEQTNILQRMRELAVQSRNDNN 60
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
D +++ E + ++ IA + NG+N L T + + +
Sbjct: 61 SADDREALNKEFQSMLKEIDRIAGSTQLNGKNLLDGSASDMTFQVGSNTGSDNQITISLS 120
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ T + + + + T I + + +++
Sbjct: 121 DAMNTTGALSGLDGMSITGTDSATAEAAFTAALSAIDDALNAINSTRADLGAVQNRLTST 180
Query: 221 KFKLATTSGAWLK 233
L +
Sbjct: 181 INNLQNINENAET 193
Score = 50.1 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 38/101 (37%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
T + L +++ ++ L+ TD+ + A +S ID +
Sbjct: 101 MTFQVGSNTGSDNQITISLSDAMNTTGALSGLDGMSITGTDSATAEAAFTAALSAIDDAL 160
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ +G++ +R+ + ++ + + E GR+ D
Sbjct: 161 NAINSTRADLGAVQNRLTSTINNLQNINENAETARGRVQDT 201
>gi|294339835|emb|CAZ88198.1| putative flagellin FlgL [Thiomonas sp. 3As]
Length = 417
Score = 70.2 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/448 (9%), Positives = 122/448 (27%), Gaps = 35/448 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ ++ + + L + ++S+G + + +D + + L+
Sbjct: 3 ISTSQFYAASLTGILNQQNTLNTLSQQLSTGSTLVNPSDQPVAAAQNVALTGQINRLAGY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + A + ++S + S+ +Q+ +Q ++ +A
Sbjct: 63 AQNGQNAQNSLQLESATLQSVTTLVSQARQLAVQMNNGTVSSQDLQNAAATMQGYVQQLA 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ ++ GS + + + G + + T + D
Sbjct: 123 QYANTQDGQGNYLFAGSKSGAQPFVIQADGSVQYQGDGGQNQLALGPNLNTAIGDPGNAL 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + T ++ + + + +
Sbjct: 183 FMNARAGNGTFSVNAASSNTGGATAGPGTVNNTALAQQTLQVDGTQYQISFSGSGGSMTY 242
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+A+ +A + + ++
Sbjct: 243 SVASGNGGAFSASPVASGS------------------------------FTPGMSISLPP 272
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
N+ V +S T+ + + + A+ ++
Sbjct: 273 GNTPAITVPIVGTPSSGDSFTIGAAAPQSLFQTFQSLAQAFSASAQASGSNALRAQSISN 332
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ +D +A IGS ++ + + ++ +L + T
Sbjct: 333 ALASLDQNQTNLLSAQASIGSRLQQVQAVQTQNSSLTLQLQTQQTQLTSINYPQVITEYQ 392
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
+ T Q A +A + V LSLF+
Sbjct: 393 SSLTALQAAQKAFTQVQG-----LSLFQ 415
>gi|91776316|ref|YP_546072.1| flagellar hook-associated protein FlgL [Methylobacillus flagellatus
KT]
gi|91710303|gb|ABE50231.1| flagellin-like protein [Methylobacillus flagellatus KT]
Length = 304
Score = 70.2 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 19/196 (9%), Positives = 57/196 (29%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN + +L + + + + ++SS R+ AD+ + + +++ +
Sbjct: 3 ISTNTLYQNGLSRLSQLQVDQDRLMQQISSKKRILTPADDPVGAARSLELQNSQRVNTQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ ++ + + D++ K ++ D LQ+ L +
Sbjct: 63 ERNRMFAENSMNAIEGNLQGVTDLLIAAKARLAEAGNASYDDVQRSYIAIDLQNDLEALV 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ + G ST + ++ + V + +
Sbjct: 123 ALANAQDGSGNYLYAGYSTDTAPYTLNAGGATYNGDNQVRQLQVSANRQLPVAENGPSVF 182
Query: 184 TERYGLLDRNHKIKVE 199
+ +
Sbjct: 183 QANGNDVFAALATITD 198
Score = 43.6 bits (100), Expect = 0.059, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 23/78 (29%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ + + + + GS I K + L D D A
Sbjct: 214 QDGLAAASDALQGTLDNVLTVRARNGSALKEIEALNSDGSSRDLQYAKSLSELQDLDYAK 273
Query: 418 ESTRLSALQTQQQLAVQA 435
+ L+ QT + A +A
Sbjct: 274 ALSDLAKQQTVLEAAQKA 291
>gi|73745736|gb|AAZ81992.1| flagellin subunit FliC [Clostridium difficile]
gi|73745744|gb|AAZ81996.1| flagellin subunit FliC [Clostridium difficile]
gi|73745774|gb|AAZ82011.1| flagellin subunit FliC [Clostridium difficile]
Length = 138
Score = 70.2 bits (169), Expect = 8e-10, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 45/123 (36%)
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
T+ + + + + + +T A + MVS +D
Sbjct: 16 YGTNVSGTSNNNNEIKIQLVNTASIMASAGITTASIGSMKAGGTTGTDAAKTMVSSLDAA 75
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+K ++ K+G+ +R+ ++ + + V R+ D D+ASE LS + Q
Sbjct: 76 LKSLNSSRAKLGAQQNRLESTQNNLNNTLENVTAAESRIRDTDVASEMVNLSKMNILVQA 135
Query: 432 AVQ 434
+
Sbjct: 136 SQS 138
>gi|154252993|ref|YP_001413817.1| putative flagellin protein, C-terminus [Parvibaculum
lavamentivorans DS-1]
gi|154156943|gb|ABS64160.1| putative flagellin protein, C-terminus [Parvibaculum
lavamentivorans DS-1]
Length = 375
Score = 70.2 bits (169), Expect = 8e-10, Method: Composition-based stats.
Identities = 43/260 (16%), Positives = 86/260 (33%)
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
+ ++ TI+ + + + + A A +
Sbjct: 116 ADTDYSASGASATFTVALGDASADTITLDQDYGSLAAMVSDINDQLSAASAGVTAEVSGT 175
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
A +G+ S ++ + +
Sbjct: 176 GVTFKAVSGEDITIAGADSGDFGSTLSSDNGETLTEARATYVTDFNGLRDQIDQIANDAS 235
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
N + ++ T++ +D ++D +T+ + ++ +E V+ ++T
Sbjct: 236 FNGINLLKGDTLTVNFNEDSTSKLDITGVTMTVGDDLGIDEADFSTNADIETAVAGLNTA 295
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
A A G+ S + ++DF M +E G G L AD E+ L ALQT+Q L
Sbjct: 296 TATLRAQASTFGANLSVVQNRQDFTSNMISVLETGSGNLTLADTNEEAANLLALQTRQSL 355
Query: 432 AVQALSIVNNSTARILSLFR 451
A +LS+ + +LSL R
Sbjct: 356 AQTSLSLATQAEQSVLSLLR 375
Score = 62.1 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/288 (12%), Positives = 87/288 (30%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I N + + + L+ + Q+R++SGL+VS A DN + A + + L
Sbjct: 1 MGDITINSAVRTNLETLQSTAKMMAQTQNRLASGLKVSSALDNPQSFFTAAGLNARASDL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
SA+ D++ LG + A G+ ++ K+ ++ + ++ +
Sbjct: 61 SALQDSMSLGVQTLKAADEGIKSIQKLVDQAKSVANQALQAKATTTTLTTTAAPDADTDY 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ S+ + T + + + D N ++ + + +
Sbjct: 121 SASGASATFTVALGDASADTITLDQDYGSLAAMVSDINDQLSAASAGVTAEVSGTGVTFK 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
E + + + + + ++ A+ +
Sbjct: 181 AVSGEDITIAGADSGDFGSTLSSDNGETLTEARATYVTDFNGLRDQIDQIANDASFNGIN 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
KG + + + T T A + + +
Sbjct: 241 LLKGDTLTVNFNEDSTSKLDITGVTMTVGDDLGIDEADFSTNADIETA 288
>gi|209545550|ref|YP_002277779.1| flagellin domain-containing protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533227|gb|ACI53164.1| flagellin domain protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 327
Score = 69.8 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 52/275 (18%), Positives = 94/275 (34%), Gaps = 3/275 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN S M A Q L +L ++ VS+G V+ AAD A + IAQ M + +
Sbjct: 3 LSINTNTSEMIALQTLDATQTSLSKTENAVSTGKSVATAADGPAAFGIAQQMSGNIAGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKS---IQSEITQLQSQ 118
AV+ + + V ++ I ++ ++ IT S +EIT +Q
Sbjct: 63 AVNSGLSFAAQVVSGTSDAANQIITLLQGLQGAITNLGNDSGSPTSLGQDATEITGYLAQ 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IAR ++FNG N L ++++ + + +
Sbjct: 123 IDTIARNATFNGVNLLAGASTDGRGITSQTLNYVTGLQGDTQSVSGFNSTIAAAIGSGVA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
T + + + + +V+ + ++ + AA
Sbjct: 183 GVTVSGSATASMSEALGLAMGGSAGANATANVFVTYSGGTGSLSTAFGSTVSDQVAAMIK 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
Q A V A+ S T+ + S
Sbjct: 243 QVQVAITAMTNVTSTLGNASNLIASMTTYGTTVSD 277
Score = 63.6 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 56/121 (46%)
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
+ + + + + M+ + I T +G+ S+ I
Sbjct: 207 GANATANVFVTYSGGTGSLSTAFGSTVSDQVAAMIKQVQVAITAMTNVTSTLGNASNLIA 266
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + D + GVG L DA+MA+ES +L++LQT+Q LA+++L+I N + IL LF
Sbjct: 267 SMTTYGTTVSDDLTAGVGALTDANMAAESAQLTSLQTKQSLAIKSLTIANGQSQNILQLF 326
Query: 451 R 451
+
Sbjct: 327 Q 327
>gi|91224192|ref|ZP_01259455.1| flagellar hook-associated protein L [Vibrio alginolyticus 12G01]
gi|269968151|ref|ZP_06182184.1| flagellar hook-associated protein 3 [Vibrio alginolyticus 40B]
gi|91191103|gb|EAS77369.1| flagellar hook-associated protein L [Vibrio alginolyticus 12G01]
gi|269827219|gb|EEZ81520.1| flagellar hook-associated protein 3 [Vibrio alginolyticus 40B]
Length = 299
Score = 69.8 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 52/143 (36%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + L+ + L ++S+G R++ +D+ + + A++
Sbjct: 3 ISDNQFSQMMLHSLQSNSAGLGEALQQMSTGKRLTKLSDDPMASIKLLNLDRETSAIAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ I + + + + + + ++++ G +S IT+L+S I
Sbjct: 63 KNNIENVKTTLSSQETHLDSIKESLKSMRDIALWGANGSLTDESRGGMITELKSYRDSIE 122
Query: 124 RGSSFNGENWLRTDLGSSTASIA 146
+ E G+ T + A
Sbjct: 123 SSFNAQDEEGHYLFSGTKTDTAA 145
>gi|71733470|ref|YP_275554.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|289627771|ref|ZP_06460725.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289651638|ref|ZP_06482981.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
aesculi str. 2250]
gi|298487848|ref|ZP_07005888.1| Flagellar hook-associated protein flgL [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|71554023|gb|AAZ33234.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298157573|gb|EFH98653.1| Flagellar hook-associated protein flgL [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320325101|gb|EFW81170.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
glycinea str. B076]
gi|320329360|gb|EFW85353.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330866431|gb|EGH01140.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330986476|gb|EGH84579.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 530
Score = 69.8 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/361 (10%), Positives = 96/361 (26%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + + N+ + VSSG++++ A+D+ + + N L+
Sbjct: 3 ISTTQFYESTNTNYQRTYSNVLKTSEEVSSGIKLNTASDDPVGAARVLQLAQQNSMLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ IG ++ + ++ ++ +D M T + I + ++ +L+ +
Sbjct: 63 ASNIGTINTNIVNSETALTSIVDTMQTAREVIVSAGNGAYTDSDRLAKAAELKQYQSQLL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ N GS +++ + +G + + +
Sbjct: 123 GLMNSQDSNGQYIFAGSKSSAPPYAQNADGTYSYSGDQTSVNLAIGDGLVLPSNTTGYEA 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
E+ R + P + S + + T +
Sbjct: 183 FEQAVNTTRTSSTLLSPATDDGKVGLTGGQVTSTSAYNSGYQAGEPYTMTFLSGTQFKIT 242
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ V A+ A + + T ++ T + ++ Y
Sbjct: 243 DASGTDVTTDASTAGKFSYGSFADQTFTFRGVELTMNINLSAAESATPATAATALTNRSY 302
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
++ + S S + + A +
Sbjct: 303 ELASTPDTVSASRSPGNTSAATISSSAVGNTTADRTAFNNTFPPNGAILKFTSATAYDLY 362
Query: 364 M 364
Sbjct: 363 A 363
Score = 40.1 bits (91), Expect = 0.78, Method: Composition-based stats.
Identities = 54/456 (11%), Positives = 129/456 (28%), Gaps = 23/456 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRV-SSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I TN +++ L I ++ ++ + S+G +D A + + +S L
Sbjct: 68 TINTNI--VNSETALTSIVDTMQTAREVIVSAGNGAYTDSDRLAKAAELKQYQSQLLGLM 125
Query: 62 AVSDAIGL---------GSSKVDIAKAGMS---KAIDVMSTIKNKITAGVERGTDSKSIQ 109
D+ G A S V I + + Q
Sbjct: 126 NSQDSNGQYIFAGSKSSAPPYAQNADGTYSYSGDQTSVNLAIGDGLVLPSNTTGYEAFEQ 185
Query: 110 SEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
+ T S ++ + + S++A + G I
Sbjct: 186 AVNTTRTSS-TLLSPATDDGKVGLTGGQVTSTSAYNSGYQAGEPYTMTFLSGTQFKITDA 244
Query: 170 LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT-- 227
+ S+ D+ + + + A+ + +
Sbjct: 245 SGTDVTTDASTAGKFSYGSFADQTFTFRGVELTMNINLSAAESATPATAATALTNRSYEL 304
Query: 228 --SGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
+ + A+ + + + + + + + SAT + S
Sbjct: 305 ASTPDTVSASRSPGNTSAATISSSAVGNTTADRTAFNNTFPPNGAILKFTSATAYDLYAS 364
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
+ + +S T N++ + + ++S + I + +
Sbjct: 365 PVTSSSKPVSSGTLTGSTANASGVNFTVSGTPAAGDQFVVESGTHQTENILNTLTAAIKA 424
Query: 346 ITRHANTDAYNEKL---AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
++ + + + A+ + I + I A+ A G+ Q L++
Sbjct: 425 LSTPTDGNLVASQKLDAALGSALGNIASSIDQASTARSAGGARQLAATAQGTTNDLLKGN 484
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
G V+AD+ +TRL+ +T + Q
Sbjct: 485 NTVEQGTYVNADIVEATTRLTLQKTMLDASQQVFVQ 520
>gi|311031934|ref|ZP_07710024.1| flagellin domain protein [Bacillus sp. m3-13]
Length = 466
Score = 69.8 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 28/63 (44%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ K + + + ID I ++ GK+G++ +R+ + + + + R+ D
Sbjct: 401 NISNKESASKSIEVIDNAISKVSSERGKLGAVQNRLEHTINNLGTSSENLTAAESRIRDV 460
Query: 414 DMA 416
D A
Sbjct: 461 DYA 463
Score = 54.0 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/307 (8%), Positives = 81/307 (26%), Gaps = 8/307 (2%)
Query: 73 KVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFN 129
+ A+ +++ D++ ++ +D ++Q E+ QL S++ I + FN
Sbjct: 1 MIQTAEGALNETHDILQRMRELANQSSNGTATDSDRTAMQDELNQLTSEVNRIGNTTEFN 60
Query: 130 GENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGL 189
+ L +GSS + + + I + V + T + + + +
Sbjct: 61 TQKLLNGGVGSSDGAKITNATSAEIAEGTAWVA-----ADITGATASIKVNGTTFDISDV 115
Query: 190 LDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIP 249
+++ + + +++ KL+ + F A+
Sbjct: 116 VNQTWSSDYKGTGGAGTANDFVNELKNVTSGGVKLSEVVDITNNGGSIEFSVKSQGASSS 175
Query: 250 VPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
+ + A G + + + + T
Sbjct: 176 IEVSTASDPSAVMLGFADAAATGTLGEVKGDPTTMERHGIEFAGTLDTADVAFSKGDTFE 235
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
V + + + + + + + D
Sbjct: 236 ITVGNESAVTVTLNEGAYKTNTGADDNEKQAAMENLVKDINAALQEAGISDKVTASLSKD 295
Query: 370 TQIKCAT 376
++ +
Sbjct: 296 NTLQFVS 302
>gi|89514744|gb|ABD75261.1| flagellin chain A [Sinorhizobium xinjiangense]
Length = 169
Score = 69.8 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/97 (40%), Positives = 62/97 (63%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+++ + + + + A +G++ +RI LQE+F+ + D+++KG+GRLVDA+
Sbjct: 73 ITGSHSLDGYIDGVQSMLSSVIDGAATLGAVQTRIDLQEEFVAALSDSIDKGIGRLVDAN 132
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
M STRL ALQ QQQL +QALSI N + + +L LFR
Sbjct: 133 MNEVSTRLKALQAQQQLTLQALSIANENPSLLLQLFR 169
>gi|73745752|gb|AAZ82000.1| flagellin subunit FliC [Clostridium difficile]
gi|73745754|gb|AAZ82001.1| flagellin subunit FliC [Clostridium difficile]
gi|73745762|gb|AAZ82005.1| flagellin subunit FliC [Clostridium difficile]
gi|73745764|gb|AAZ82006.1| flagellin subunit FliC [Clostridium difficile]
gi|73745766|gb|AAZ82007.1| flagellin subunit FliC [Clostridium difficile]
gi|73745768|gb|AAZ82008.1| flagellin subunit FliC [Clostridium difficile]
gi|73745770|gb|AAZ82009.1| flagellin subunit FliC [Clostridium difficile]
gi|73745781|gb|AAZ82014.1| flagellin subunit FliC [Clostridium difficile]
Length = 138
Score = 69.8 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 46/123 (37%)
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
T+ + + + + + +T + A + MVS +D
Sbjct: 16 YGTNVSGTSNNNNEIKIQLVNTASIMASAGITTTSIGSMKAGGTSGTDAAKTMVSSLDVA 75
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+K ++ K+G+ +R+ ++ + + V R+ D D+ASE LS + Q
Sbjct: 76 LKSLNSSRAKLGAQQNRLESTQNNLNNTLENVTAAESRIRDTDVASEMVNLSKMNILVQA 135
Query: 432 AVQ 434
+
Sbjct: 136 SQS 138
>gi|145297461|ref|YP_001140302.1| lateral flagellar hook-associated protein, LfgL [Aeromonas
salmonicida subsp. salmonicida A449]
gi|74101665|gb|AAZ99755.1| FlgLL [Aeromonas hydrophila]
gi|142850233|gb|ABO88554.1| lateral flagellar hook-associated protein, LfgL [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 299
Score = 69.8 bits (168), Expect = 9e-10, Method: Composition-based stats.
Identities = 23/188 (12%), Positives = 59/188 (31%), Gaps = 3/188 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN +S L+ + ++S+ R+ +D+ +K + A+
Sbjct: 3 ISTNQIQLSMLDNLQHGFGEYARLDRQISANKRILQPSDDPVGSVRLLGLKKEQVAMEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
I S++ + + +++ ++ D +++ SE L+ L
Sbjct: 63 QKNIANAKSQLSQGEQQLETMTNMLMRLRELTQTAATGSLSEDDRRAVASETAVLKDGLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
D+A + +G + + A + + D +++ D
Sbjct: 123 DLANARNESGSSLFAGSQVNQIAIVKTPSGDYQYQGDALTREVSIAKGVTVGLNQTADQL 182
Query: 181 TDGTERYG 188
+
Sbjct: 183 FIQNGDFF 190
>gi|327542209|gb|EGF28700.1| flagellar hook-associated protein 3 [Rhodopirellula baltica WH47]
Length = 651
Score = 69.8 bits (168), Expect = 9e-10, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 44/140 (31%), Gaps = 7/140 (5%)
Query: 4 ILTNHSAMSASQK-----LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNG 58
+ TN ++ + L ++ D++S+G RV +D+ A S A ++
Sbjct: 6 VATNRTSTPLQNQRLMFQLNSDQLAIQRQYDQLSTGRRVLSISDDPAAASRAIGLQRGVS 65
Query: 59 ALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQ 118
+ + A ++K + + + ++ ++ Q
Sbjct: 66 RTDQLVRNASAAEAFYQSADVTLNKVDTAIIEARGAAVEAAQSVLSDDQREALAMTIRQQ 125
Query: 119 LRDI--ARGSSFNGENWLRT 136
+ I A F L
Sbjct: 126 MEQIVSAGNGMFTDHQLLGG 145
Score = 37.0 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 30/68 (44%)
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ +D + +T G++G S + ++ ++ + +DAD+A + L A
Sbjct: 569 ARLDEDLDDSTRTRGRVGVWHSALQDSRTAVENENVLLQSQLSDAMDADLAVVISELQAR 628
Query: 426 QTQQQLAV 433
Q + ++
Sbjct: 629 QVALEASM 636
>gi|49205099|dbj|BAC75963.2| putative flagellar hook-associated protein FlgL [Pseudomonas
syringae pv. tabaci]
Length = 530
Score = 69.8 bits (168), Expect = 9e-10, Method: Composition-based stats.
Identities = 37/361 (10%), Positives = 96/361 (26%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + + N+ + VSSG++++ A+D+ + + N L+
Sbjct: 3 ISTTQFYESTNTNYQRTYSNVLKTSEEVSSGIKLNTASDDPVGAARVLQLAQQNSMLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ IG ++ + ++ ++ +D M T + I + ++ +L+ +
Sbjct: 63 ASNIGTINTNIVNSETALTSIVDTMQTAREVIVSAGNGAYTDSDRLAKAAELKQYQSQLL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ N GS +++ + +G + + +
Sbjct: 123 GLMNSQDSNGQYIFAGSMSSAPPYAQNADGTYSYSGDQTSVNLAIGDGLVLPSNTTGYEA 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
E+ R + P + S + + T +
Sbjct: 183 FEQAVNTTRTSSTLLSPATDDGKVGLTGGQVTSTSAYNSGYQAGEPYTMTFLSGTQFKIT 242
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ V A+ A + + T ++ T + ++ Y
Sbjct: 243 DASGTDVTTDASTAGKFSYGSFADQTFTFRGVELTMNINLSAAESATPATAATALTNRSY 302
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
++ + S S + + A +
Sbjct: 303 ELASTPDTVSASRSPGNTSAATISSSAVGNTTADRTAFNNTFPPNGAILKFTSATAYDLY 362
Query: 364 M 364
Sbjct: 363 A 363
Score = 40.5 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 53/456 (11%), Positives = 129/456 (28%), Gaps = 23/456 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRV-SSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I TN +++ L I ++ ++ + S+G +D A + + +S L
Sbjct: 68 TINTNI--VNSETALTSIVDTMQTAREVIVSAGNGAYTDSDRLAKAAELKQYQSQLLGLM 125
Query: 62 AVSDA---------IGLGSSKVDIAKAGMS---KAIDVMSTIKNKITAGVERGTDSKSIQ 109
D+ + A S V I + + Q
Sbjct: 126 NSQDSNGQYIFAGSMSSAPPYAQNADGTYSYSGDQTSVNLAIGDGLVLPSNTTGYEAFEQ 185
Query: 110 SEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
+ T S ++ + + S++A + G I
Sbjct: 186 AVNTTRTSS-TLLSPATDDGKVGLTGGQVTSTSAYNSGYQAGEPYTMTFLSGTQFKITDA 244
Query: 170 LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT-- 227
+ S+ D+ + + + A+ + +
Sbjct: 245 SGTDVTTDASTAGKFSYGSFADQTFTFRGVELTMNINLSAAESATPATAATALTNRSYEL 304
Query: 228 --SGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
+ + A+ + + + + + + + SAT + S
Sbjct: 305 ASTPDTVSASRSPGNTSAATISSSAVGNTTADRTAFNNTFPPNGAILKFTSATAYDLYAS 364
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
+ + +S T N++ + + ++S + I + +
Sbjct: 365 PVTSSSKPVSSGTLTGSTANASGVNFTVSGTPAAGDQFVVESGTHQTENILNTLTAAIKA 424
Query: 346 ITRHANTDAYNEKL---AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
++ + + + A+ + I + I A+ A G+ Q L++
Sbjct: 425 LSTPTDGNLVASQKLDAALGSALGNIASSIDQASTARSAGGARQLAATAQGTTNDLLKGN 484
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
G V+AD+ +TRL+ +T + Q
Sbjct: 485 NTVEQGTYVNADIVEATTRLTLQKTMLDASQQVFVQ 520
>gi|39936976|ref|NP_949252.1| flagellin [Rhodopseudomonas palustris CGA009]
gi|39650833|emb|CAE29356.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
Length = 886
Score = 69.8 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ A + ++ ++T + A GS S + ++++F K + + ++ G L AD
Sbjct: 792 DNAATNKTLAALNTASTTLRSQASSYGSNLSIVQIRQNFAKSLINVLQTGSANLTLADTN 851
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV ALS+ N S +L L R
Sbjct: 852 EEAANSQALSTRQSIAVSALSLANQSQQSVLQLLR 886
Score = 66.7 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/274 (12%), Positives = 80/274 (29%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M ++ + + L+ L Q+R++SG +V+ A DN + A + S +
Sbjct: 1 MADVVLSAAVRQNLLSLQSTADLLATTQNRLASGKKVNTALDNPTNFFTAAGLDSRASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + D IG G + A G++ ++ T K+ ++ + + +
Sbjct: 61 NNLLDGIGNGVQILQAANTGITSLNKLIDTAKSIANQALQSNVGYSTKSNVAATIAGATP 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ RG+ +++ + S + G + + T +
Sbjct: 121 NDLRGTQTFASAIATSNVIYDGTAGGTSGVSLTDTLGGGIGSLVGTAVTKNVPTDATSTG 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ +G + K T + ++ +
Sbjct: 181 AVLYTGTATATATGTDLISSLTNGSTTTPTGPQAGDVLVVDGKTITFTATGTPTVDSNGN 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
G+ L A N + + S
Sbjct: 241 YTIGVNQPINALLATVDTINGNTSNPSVVNSSGH 274
>gi|167835121|ref|ZP_02462004.1| flagellar hook-associated protein FlgL [Burkholderia thailandensis
MSMB43]
Length = 410
Score = 69.8 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 56/451 (12%), Positives = 114/451 (25%), Gaps = 50/451 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I ++ + D + + +VSSG+ ++ ADN + A + + + LS
Sbjct: 3 ISSSQLYSLNVDMMNDQQAQIAQLYQQVSSGVSLTTPADNPIAAAQAVQLSATSATLSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMS---TIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + + + ++ DV++ G +D ++ ++I + L
Sbjct: 63 TQNQTIVQTALQTEDTTLTSVNDVLNAAYQAIMHAGDGGLSDSDRAALAAQIQGSRDHLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G ++ K G D G + D P+ S
Sbjct: 123 TLANTADGAGNYLFAGFQPTTQPFSNKPGGGVTYAGDYGARTVQIADTRTVPQGDNGASV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G L VS+ + S +T +F +
Sbjct: 183 FMSVPFLGSLPVPAAGASNTGTGTIGAVSITNPSDPTNTHQFTI---------------- 226
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ T + + I +G + V T T
Sbjct: 227 -----TFGGTAAAPTYTVTDNTVTSPTPPVAQPYSPGEGIDLGGQTVAVSGTPAAGDTFT 281
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
V T V T
Sbjct: 282 VTPAPQAGTDVFATLDTVIAALKTPVGNSPTAS---------------------TALTNT 320
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
M + + + +G + + + L D ++ + +
Sbjct: 321 MATASTKLMNTMTNVLTVQASVGGRLQEVKAMQAVTTTNSLQTTNSLSNLTDTNLPAAIS 380
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ LQ A +A + LSLF+
Sbjct: 381 QFLQLQNSLSAAQKAFVQ-----MQNLSLFQ 406
>gi|58039799|ref|YP_191763.1| hypothetical protein GOX1355 [Gluconobacter oxydans 621H]
gi|58002213|gb|AAW61107.1| Hypothetical protein GOX1355 [Gluconobacter oxydans 621H]
Length = 792
Score = 69.8 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 62/373 (16%), Positives = 108/373 (28%), Gaps = 9/373 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ N + +S Q L L + VS+G VS A+DN A +SIA M++ + AL
Sbjct: 1 MLSVN-NAAVLSGLQALSQATTALNKAETAVSTGKSVSTASDNPAIYSIANTMQAQSSAL 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ +S + + V A A + + ++++ I+ G G D+ +I ++I+Q +Q+
Sbjct: 60 TGISQGLNVLGQVVQTASAQGTLINNALTSLAANISEGQNTGIDTSTINTQISQTLTQID 119
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A ++FNG N L L S S L + +D +
Sbjct: 120 SMASSATFNGVNLLAGALVSGVNYNTASTSLDVYGGTLKIAGNNATSAGLGLSGLNVDQA 179
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ L + A +
Sbjct: 180 GVTIPFDPESLVIAGPQTTTLTL--------HNIAQATGTGTAQDPAVQYQFVAEESDTG 231
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + A S + ++ V+ T NS +
Sbjct: 232 ANNPGTSTLATINTAIGGGADLQWDPSSGDLTSGSNTVITSQYTDPNGVKFYTLNSGEAI 291
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
S V D P I S S +
Sbjct: 292 QVSQGSNGNPVYTVSSTFDALGNPTAQSVITPVTITSAGSGKMDDEAISDTFMTAISGQG 351
Query: 361 MEEMVSFIDTQIK 373
S D +
Sbjct: 352 FHVDRSSTDGALT 364
Score = 61.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/337 (14%), Positives = 94/337 (27%), Gaps = 6/337 (1%)
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
IA FN G + G + ++ TV +
Sbjct: 456 IATRMDFNTNGTAAGKDGYQLVLNQTTSDGKLSSSQTIAGSLQSLVDSTPTMTVDATTGI 515
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ + + + + + ++S + +
Sbjct: 516 PAPSKIISQSGGSTVFAISTTSTGVPMYISLEKDGTTGNLTYTVSSSSDFPQGETQNIVA 575
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ P + T S S A+S+ + + +
Sbjct: 576 VSVTPDMTSPSTYQDSLFTPIVDTLTSLGISTASSSIDSGTLSIVASGSNIAGSLPSGTV 635
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL-- 359
N T V + + + + +
Sbjct: 636 TADNGTPVWATPAAPSVFSNIQHPYDSTLDTYLSVYQSVPANSFLLAADSRNFSGSTITG 695
Query: 360 ----AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + + I T+ +G + I +DA+ G+ L DAD+
Sbjct: 696 QQVSGYQVAIGAVTAAISKMTSINANLGDSTDLISQLTKNTAAQQDAITTGISALTDADL 755
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
A +S L + QT+QQLAVQ+LSI++ ++ IL LF+G
Sbjct: 756 AKQSVLLLSAQTKQQLAVQSLSIMDGQSSMILKLFQG 792
>gi|87308306|ref|ZP_01090447.1| hag; flagellin [Blastopirellula marina DSM 3645]
gi|87288863|gb|EAQ80756.1| hag; flagellin [Blastopirellula marina DSM 3645]
Length = 288
Score = 69.8 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 47/118 (39%), Gaps = 3/118 (2%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
+ + + ++ R+S+G R++ +D+ A A ++KS A+ +
Sbjct: 12 LIVATAVNRNLNSMLGALQRLSTGQRINRGSDDPAALIAANMIKSQIATREALQRSTLRV 71
Query: 71 SSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
S V +A +G+++ + S I+ + + ++Q EI + +
Sbjct: 72 SGLVAVADSGLAEVSRLTSEIRGNLLTAASSTTTDAERAALQLEIDGAIDAIDRVGES 129
>gi|261253607|ref|ZP_05946180.1| flagellar hook-associated protein FlgL [Vibrio orientalis CIP
102891]
gi|260936998|gb|EEX92987.1| flagellar hook-associated protein FlgL [Vibrio orientalis CIP
102891]
Length = 397
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/425 (11%), Positives = 108/425 (25%), Gaps = 58/425 (13%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
LR + Q +++SG ++ A+D+ Q + L +DAI L ++
Sbjct: 15 QNDLRRSEAKVHHNQAQLASGKKLMKASDDPLATHYIQNIGQQKEQLRQYTDAIVLTRNR 74
Query: 74 VDIAK---AGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
++ + + + D ++ G D + + EI +L ++F
Sbjct: 75 LEHHEVIISNAEEFTDDAKRTVMEMINGSLSPEDRLAKRREIEEL---------ANNFLN 125
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
++ + G+ + K F RD +G V
Sbjct: 126 LVNVQDESGNYIFAGTKPKNQPFFRDKDGDVTY--------------------------- 158
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
D S ++ + + +++ +
Sbjct: 159 ------------AGDDYQRKMKISNSLEMPINNPGSKLFMEIDNPFGSYEPQYNLKEASE 206
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
L N + + Y D V + + T+
Sbjct: 207 LLLERAINTNPDDQSEYKVTFVDMPDGKYGYQLERDGSVVKADVFNPAEGIKFEELTIQV 266
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
G + D+ ++ + ++
Sbjct: 267 KGQLTKGDEITLDRRDTYSIFDTFKEAMNLSSGSVSDSSNTAKLHQITQEFHAAFIHLNK 326
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+G+ S + +QE+ + + + K D D A + Q
Sbjct: 327 A-------RTDVGARLSTLDIQEEQHEDFKMTLAKSKSNFEDLDYADAIIEFNENSRALQ 379
Query: 431 LAVQA 435
+ QA
Sbjct: 380 ASQQA 384
>gi|115523544|ref|YP_780455.1| flagellin [Rhodopseudomonas palustris BisA53]
gi|115517491|gb|ABJ05475.1| protein of unknown function DUF1522 [Rhodopseudomonas palustris
BisA53]
Length = 885
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 51/111 (45%)
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
L ++ + + A + ++ ++T + A GS S + +++DF K +
Sbjct: 775 AAQLGLSTLVEGFDFIDNAATNKTMAALNTASTSLRSQASAYGSNLSIVQIRQDFSKNLI 834
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
++ G L AD E+ AL T+Q +AV AL++ N S +L L +
Sbjct: 835 SVLQTGSSNLTLADTNEEAANSQALSTRQSIAVSALALANQSQQSVLKLLQ 885
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 49/115 (42%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M++++ + S L+ L Q+R++SG +V+ A DN + A + S + +
Sbjct: 1 MSNVVLSASVRQNLLSLQSTADLLATTQNRLASGKKVNSALDNPTNFFTAAGLDSRSSDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL 115
+ + D I G + A G++ ++ T K+ + ++ + +
Sbjct: 61 NNLLDGISNGVQILQAANTGITSLNKLIDTAKSIASQALQSNVGYTKKSNVAATI 115
>gi|192292804|ref|YP_001993409.1| flagellin [Rhodopseudomonas palustris TIE-1]
gi|192286553|gb|ACF02934.1| protein of unknown function DUF1522 [Rhodopseudomonas palustris
TIE-1]
Length = 886
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ A + ++ ++T + A GS S + ++++F K + + ++ G L AD
Sbjct: 792 DNAATNKTLAALNTASTTLRSQASSYGSNLSIVQIRQNFAKSLINVLQTGSANLTLADTN 851
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV ALS+ N S +L L R
Sbjct: 852 EEAANSQALSTRQSIAVSALSLANQSQQSVLQLLR 886
Score = 66.7 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/274 (12%), Positives = 81/274 (29%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M ++ + + L+ L Q+R++SG +V+ A DN + A + S +
Sbjct: 1 MADVVLSAAVRQNLLSLQSTADLLATTQNRLASGKKVNTALDNPTNFFTAAGLDSRASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + D IG G + A G++ ++ T K+ ++ + + +
Sbjct: 61 NNLLDGIGNGVQILQAANTGITSLNKLIDTAKSIANQALQSNVGYSTKSNVAATIAGATP 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ RG+ +++ + S + G + + T +
Sbjct: 121 NDLRGTQTFASAIATSNVIYDGTAGGTSGVSLTDTLGGGIGSLVGTAVTKNVPTDATSTG 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + +G + K T + ++ +
Sbjct: 181 SVLYTGTATATATGTDLISSLTNGSTTTPTGPQAGDVLVVDGKTITFTATGTPTIDSNGN 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
G+ L A N + + S
Sbjct: 241 YTIGVNQPINALLATVDTINGNTSNPSVVNSSGH 274
>gi|163783193|ref|ZP_02178187.1| flagellar hook associated protein FlgL [Hydrogenivirga sp.
128-5-R1-1]
gi|159881527|gb|EDP75037.1| flagellar hook associated protein FlgL [Hydrogenivirga sp.
128-5-R1-1]
Length = 481
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/459 (7%), Positives = 90/459 (19%), Gaps = 34/459 (7%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N Q+ I + +++G R+ + +D+ +K D LS S
Sbjct: 6 NLLFTIFQQQDERIRKEIARKTIEIATGKRIHNLSDDPVATFNVLSLKKDIAQLSQFSKN 65
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE----RGTDSKSIQSEITQLQSQLRDI 122
+ + K + + K L L
Sbjct: 66 RLFSDVNLSYIDFTLDKMSTKIKYLYTKAVQAKNELNTTDALRAVGVEFGEALSFLLDRA 125
Query: 123 --------------ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
F + + I ++ +
Sbjct: 126 NEKVGENYIFSGSALTTKPFTNSFVYQGSQETFNVQIDETNFVEVFSAGSSVFSANVYQM 185
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK----------------DIDVSVYD 212
+ + G + + V
Sbjct: 186 DTLFSSPDTAFTVSGIMNVNYNSTTVSLDYGRGIWYLAGKVSDQNVPLSSYGFDGDLVLY 245
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
+ + T + S +
Sbjct: 246 DNSMNEVARITNYGQYSLNDLVTQINTAFGGENITASIVTNPDGTYTLRVSDGDSPANNF 305
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ ++ + N+ D V T + +T S
Sbjct: 306 IEDTSGNVLESNNLQNFVKIFNGISPGDVNAFVHQVPNGQYTLRLAPEDVSTTLSVSFSG 365
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + + + I + + GSI S++ Q
Sbjct: 366 TALGNFSTPNIFQLINEVKDKLSGGLAPDDSDLLAIQRAYDKVVSERSRFGSILSQVKDQ 425
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ + D + K + +++ + +T +
Sbjct: 426 QPVQENRMDVLRKQKSDTEEVELSESIMEYTRYRTAYEA 464
>gi|92116892|ref|YP_576621.1| hypothetical protein Nham_1337 [Nitrobacter hamburgensis X14]
gi|91799786|gb|ABE62161.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 537
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + +++ +D A A +G+ S + +++DF K + + ++ G L AD
Sbjct: 443 DNGSANSVIANLDKASSTLRAQASTLGANLSIVQIRQDFSKNLINVLQTGSSNLTLADTN 502
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV AL++ N S +L L R
Sbjct: 503 EEAANSQALATRQSIAVSALALANQSQQSVLQLLR 537
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 47/110 (42%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ + S L+ L Q+R+++G +V+ A DN + A + + +
Sbjct: 1 MSDIVLSTSVRQNLLSLQSTADLLATTQNRLATGKKVNTALDNPTNYFTAAALDNRAHDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS 110
+++ D IG G + A G++ ++ T K+ ++ S
Sbjct: 61 NSLLDGIGNGVQVLQAANTGLTSLQKLVDTAKSVANQVLQSQAGYSQKSS 110
>gi|332525059|ref|ZP_08401239.1| flagellin-related hook-associated protein [Rubrivivax
benzoatilyticus JA2]
gi|332108348|gb|EGJ09572.1| flagellin-related hook-associated protein [Rubrivivax
benzoatilyticus JA2]
Length = 308
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 54/140 (38%), Gaps = 3/140 (2%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
++ + L+ L QDR++SG RV A+D+ + A+ + A A+
Sbjct: 11 TSIKNLQKRQEGLSDAQDRLTSGKRVVTASDDPVAAARAERALAAMVRSEANQRALEASR 70
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSF 128
+ + A++ + A D++ + + G + +++ + +++QL +A
Sbjct: 71 NVMLQAESALGNAGDLLQQARELVVQGGNGSYGASNRETLADALRGIRAQLLGVANRGDG 130
Query: 129 NGENWLRTDLGSSTASIAKS 148
G S +
Sbjct: 131 AGGYVFAGQGADSPPFVDTP 150
Score = 45.5 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 5/87 (5%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ ID + + G +R + E I + A + D DM +
Sbjct: 223 LADIDAVMNNVLTSRAAAGEALNRTDMVESRIAESKLAAKTERSNAEDLDMVQAISDFQN 282
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
QT A++ S+V SLF+
Sbjct: 283 RQTGYDAALKTYSLVQRQ-----SLFQ 304
>gi|296445178|ref|ZP_06887138.1| flagellin domain protein [Methylosinus trichosporium OB3b]
gi|296257352|gb|EFH04419.1| flagellin domain protein [Methylosinus trichosporium OB3b]
Length = 303
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 58/162 (35%), Positives = 87/162 (53%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M SILTN SA++A Q LR NL Q +S+GL+VS AADNA+ W AQ M+SD G L
Sbjct: 1 MASILTNSSAITALQSLRSTQQNLATTQKEISTGLKVSSAADNASTWGNAQTMQSDRGVL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S +SD++ + SS +++A A ++ AI V++ IK ++ + G D+ I + + L QL
Sbjct: 61 STISDSLSVSSSVLNVASAAVTNAISVINNIKTQVAQAAQPGADTSKIGTTLAGLSDQLS 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
I ++FNG N S + + S +
Sbjct: 121 SIVTSANFNGLNLTDGSASSYSFIASYSESHGTAASSLNTID 162
Score = 59.0 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/115 (38%), Positives = 61/115 (53%)
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ A+ + +S D I T A KIG+ + + Q FI
Sbjct: 189 QATGSSAATDFTALSETDVGSATAIADTLSNADKVIADLTTYAAKIGATQTSVDAQGAFI 248
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
K + D++ +GVG L+DADM STRL ALQTQQQL VQ+LSI N ++ +IL LF+
Sbjct: 249 KTLNDSLGEGVGSLIDADMNEASTRLQALQTQQQLGVQSLSIANQNSQQILRLFQ 303
>gi|9843801|emb|CAC03723.1| flagellin [Pseudomonas fragi]
Length = 503
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 49/161 (30%), Gaps = 1/161 (0%)
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
S S + G+S + ++ ++ T N+ + + +
Sbjct: 329 NDTSVSFNGVGVKFKKGDSMDTIVSSINSASTGVTASKNADNTLKLFSTKDITIAGGSCR 388
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
D+ + + + + + + I+ +G++
Sbjct: 389 YWPTSLGLTDTARITTANTVETTVSDLSVLTDEGARQTIQALTGTIQQIDTQRSALGAVQ 448
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+R ++ + GR+ D D ASE+ L+ QT
Sbjct: 449 NRFDSTVSNLQ-ASENSTAARGRVQDTDFASEAAELTKQQT 488
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 34/100 (34%), Gaps = 3/100 (3%)
Query: 57 NGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEIT 113
++ GSS A+ M ++ +++ ++ D S+Q E T
Sbjct: 11 VKGMAVTIANANNGSSIAQTAEGAMQESTNILQRLRELALQSANGDKSADDRASLQQEFT 70
Query: 114 QLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+L I+ ++F N L + + + +
Sbjct: 71 AKVGELTRISSTTTFGSRNLLDGSFQNQSFQVGADANQTI 110
>gi|258621056|ref|ZP_05716090.1| Flagellar hook-associated protein 3 [Vibrio mimicus VM573]
gi|262166275|ref|ZP_06034012.1| flagellar hook-associated protein FlgL [Vibrio mimicus VM223]
gi|262170832|ref|ZP_06038510.1| flagellar hook-associated protein FlgL [Vibrio mimicus MB-451]
gi|258586444|gb|EEW11159.1| Flagellar hook-associated protein 3 [Vibrio mimicus VM573]
gi|261891908|gb|EEY37894.1| flagellar hook-associated protein FlgL [Vibrio mimicus MB-451]
gi|262025991|gb|EEY44659.1| flagellar hook-associated protein FlgL [Vibrio mimicus VM223]
Length = 397
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/430 (10%), Positives = 101/430 (23%), Gaps = 54/430 (12%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N+ A+ +R + Q +++SG ++ A+DN Q + L D
Sbjct: 9 HNYQAV--QNDIRRQESKVFNNQAQLASGKKLLSASDNPLATHYIQNVGQQEEQLRQYLD 66
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
AI L ++++ + +S + + K + + + + LQ
Sbjct: 67 AIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQE------MA 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S+F ++ + G+ + K F RD+ G V
Sbjct: 121 SNFLNLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYA--------------------- 159
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
D L G
Sbjct: 160 -------------------------GDDYQRKMKISNSLEIPFNNPGSKVFMEIPNPYGS 194
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
L + S + + + + +
Sbjct: 195 YEPNYTLQEGSELLLERAVNLNPDDTSSYRITFVDMPDGKNGYQLERNGSVVQAGEFDPK 254
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + + + + + + ++V
Sbjct: 255 TGIQFEELNIQVKGQITKGDAIDLTPRDTFSVFDTFRDAIRYAEGSVSDASNTAKLHQLV 314
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
T IG+ S + +QE+ + + ++ K D D A +
Sbjct: 315 EEFHTAFIHLNKTRTDIGARLSTLDIQEEQHEDFKISLAKSKSTFEDLDYAEAVIEFNEN 374
Query: 426 QTQQQLAVQA 435
+ +A
Sbjct: 375 SRALDASQKA 384
>gi|87242502|gb|ABD33790.1| flagellin [Bacillus weihenstephanensis]
Length = 316
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/312 (9%), Positives = 85/312 (27%), Gaps = 5/312 (1%)
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+A ++ +G + +RT + + + + + + T + +
Sbjct: 10 VAANNTQDGMSLIRTADSAMNSVSNILLRMRDLANQSANGTNTDKNQAALDKEFSALKQQ 69
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ K+ I + + +T L +
Sbjct: 70 IDYISTNTEFNDKKLLDGSNKTISIQTLDNADTNKQMNIQLANVSTKELKLDNLDIEGTT 129
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A A T +G + S + ++ V +
Sbjct: 130 TANLKMTDEDIKALGTAHTDTKTAAGKLAAIDTKSVVAKDLTDAVANVASFKAGFDKVKG 189
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ V + D + + + T + +
Sbjct: 190 FLDSKEVETIEKALEKFDAVGGQTLDNAKAIGDALTTDTSKFAKDTAYKKETSDAS---- 245
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ ID ++ + +G+ +R+ + +K ++ ++ DADMA E +
Sbjct: 246 -NAIASIDAALESIASNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSE 304
Query: 422 LSALQTQQQLAV 433
++ + + +
Sbjct: 305 MTKFKILNEAGI 316
Score = 61.7 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 14/154 (9%), Positives = 46/154 (29%), Gaps = 3/154 (1%)
Query: 53 MKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQ 109
M++ L ++ G S + A + M+ +++ +++ + ++
Sbjct: 1 MRARENGLGVAANNTQDGMSLIRTADSAMNSVSNILLRMRDLANQSANGTNTDKNQAALD 60
Query: 110 SEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
E + L+ Q+ I+ + FN + L + + + + + T
Sbjct: 61 KEFSALKQQIDYISTNTEFNDKKLLDGSNKTISIQTLDNADTNKQMNIQLANVSTKELKL 120
Query: 170 LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
+ + ++ +
Sbjct: 121 DNLDIEGTTTANLKMTDEDIKALGTAHTDTKTAA 154
>gi|326796372|ref|YP_004314192.1| flagellin domain protein [Marinomonas mediterranea MMB-1]
gi|326547136|gb|ADZ92356.1| flagellin domain protein [Marinomonas mediterranea MMB-1]
Length = 270
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 68/178 (38%), Gaps = 3/178 (1%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
GLR++ A+D+AA +IA + S G S IA++G+ + +++++
Sbjct: 30 GLRINSASDDAAGLAIANRLTSQIDGNGQAVANSVSGISATQIAQSGLESVTNDLTSLRE 89
Query: 94 KITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVI 150
+D +++Q + +L + ++D +SF G + L D A +
Sbjct: 90 LAVQAGNGIYSDSDRQALQQQADELIANIQDTIDQTSFAGTDLLSEDGSIDFQVGADADS 149
Query: 151 GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ ++ +T + T T T +D ++ + ++
Sbjct: 150 TLGVTTNDLANTLTGTGLFSLDITDQSSLDTALTAIDDSIDSVSSLQADYGATENAFT 207
Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 40/98 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +++ ++ ID I ++ G+ + + D + ++ R+ D D
Sbjct: 172 ITDQSSLDTALTAIDDSIDSVSSLQADYGATENAFTSRVDSLLAAQENESAARSRIQDTD 231
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
A+ + A ++Q +V + N R LSL G
Sbjct: 232 YAAAVSEQIAASIREQSSVSVQAQANADAGRSLSLLLG 269
>gi|157693941|ref|YP_001488403.1| flagellar hook-associated protein FlgL [Bacillus pumilus SAFR-032]
gi|157682699|gb|ABV63843.1| flagellar hook-associated protein 3 [Bacillus pumilus SAFR-032]
Length = 303
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/176 (11%), Positives = 66/176 (37%), Gaps = 4/176 (2%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
+ ++ + + L + ++ +G R + +D+ + + + +
Sbjct: 7 MISQNSLRNISKSYEKLSKINEQAQTGRRFTKTSDDPVAAVKSLQYSTAMFRNEQYQNNL 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQSQLRDIAR 124
+ +D ++ +++ ID+MS +++K+ + + + EI Q++ Q+ D A
Sbjct: 67 NEAQNWIDTSETSVTEIIDIMSNVRDKVLDAANGTKQPEDLAAIGVEIGQMKKQIID-AM 125
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ G+ + + + +N + D T+ ++S+
Sbjct: 126 NTQMLGKFVFNGTNTNVKPVVENADGTFTFNFENYTDANSVKSNISDGITLNVNSN 181
Score = 45.1 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 21/181 (11%), Positives = 49/181 (27%)
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
AA + + ++ G + T + N T A
Sbjct: 108 AAIGVEIGQMKKQIIDAMNTQMLGKFVFNGTNTNVKPVVENADGTFTFNFENYTDANSVK 167
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
++ + + V +T N+ ++ + ID +
Sbjct: 168 SNISDGITLNVNSNPISAFGGQSASGQNVIEMLTDLENSLKNGTFANSDDALGSIDQFKE 227
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+A +G+ S+R+ L + ++ D + L +T + A+
Sbjct: 228 VMSAERSDLGARSNRVDLVGSRLTSQFQVLKDAKSNNEDVESEKAILDLLQQETVNRAAL 287
Query: 434 Q 434
Sbjct: 288 A 288
>gi|51246542|ref|YP_066426.1| flagellar hook-associated protein 3 (FlgL) [Desulfotalea
psychrophila LSv54]
gi|50877579|emb|CAG37419.1| related to flagellar hook-associated protein 3 (FlgL) [Desulfotalea
psychrophila LSv54]
Length = 757
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/206 (11%), Positives = 59/206 (28%), Gaps = 4/206 (1%)
Query: 6 TNHS-AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN S + +L+ + + SSG++ + A+DN A +S
Sbjct: 4 TNSSTYRQLLTNINRNQKSLQNLYLQNSSGIKFNRASDNPAAILPVLSSRSQITLNERFL 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQ---SEITQLQSQLRD 121
+G + ++ + +V+ +K + K + E+ +L+ Q+ D
Sbjct: 64 STLGSSADQMASTDTSLGAMENVLQRVKEISVNTINASLSQKDLNVFADEVGELKKQMLD 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
A + + + S + + + ++ +
Sbjct: 124 TANAQVDGQYIFSGYSVTDAPFVANPDYEDSRYDEGDRSTWPIIYKGDNNRASLEVAEGE 183
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDID 207
+ I+ +
Sbjct: 184 YLDISITGNELFSGIENSNWESPNQP 209
>gi|169831933|ref|YP_001717915.1| flagellar hook-associated protein 3 [Candidatus Desulforudis
audaxviator MP104C]
gi|169638777|gb|ACA60283.1| flagellar hook-associated protein 3 [Candidatus Desulforudis
audaxviator MP104C]
Length = 310
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 19/155 (12%), Positives = 59/155 (38%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ + + + VQ++++SG R++ +++ A S +++ +
Sbjct: 3 ISTHLFYKNLLSSIHREHLGAARVQEQIASGRRINRLSEDPAALSQVLSLRTATSEIRDY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+I L S+++ A+ +++A VM + G +++ ++ + +
Sbjct: 63 VLSIDLQRSRLNRAEEALAQATQVMQDARVMAVQGATGTYSPSDLKNLAFEVDRMITALV 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN 158
++ + L T + ++ +
Sbjct: 123 GFANASRGGVKPEGLFERTVVDGQEMVVYTPPEVW 157
Score = 45.1 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 15/152 (9%), Positives = 48/152 (31%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
++ V + + G V + +D + +
Sbjct: 144 DGQEMVVYTPPEVWLEQVTGEGWGRVLTLNKLVETIDPGQVFQVEAMKDEGGNPVLRATM 203
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + E+ + ++ ++ I G +GS ++ + I++ +
Sbjct: 204 FDALFDLRDRLMAGEQSGVAGLIGVLEGHIDTLLQGRGDLGSRGYQLEKLQAQIQIQNEQ 263
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ + + ++ D D+A R++ + Q +
Sbjct: 264 LTEVLSKIGDTDVAEAVIRINRHELVLQATLS 295
>gi|310659649|ref|YP_003937370.1| flagellin and related hook-associated proteins [Clostridium
sticklandii DSM 519]
gi|308826427|emb|CBH22465.1| Flagellin and related hook-associated proteins [Clostridium
sticklandii]
Length = 304
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 41/114 (35%), Gaps = 5/114 (4%)
Query: 8 HSAMSASQKLRDINYNLEVVQDR----VSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
++M + +RD N NL + +SS + +D+ + ++SD
Sbjct: 4 TNSMMIMRTMRDQNTNLSK-MSKWNHDLSSLTNLHRPSDDPIRVARTLRLESDINMSLEY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQS 117
+ I S ++ + M++ V I+ G + Q +++
Sbjct: 63 KENIQAAKSWLEKTETAMNEITSVYQRIRELGVQGANGILKEEDTQKVAQEIKE 116
Score = 42.4 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 10/83 (12%), Positives = 34/83 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
++ +D Q+K G++G+ + I + + + + +++ + + D D
Sbjct: 210 TANHEDASASLADMDNQLKTLLQVRGEVGAKVNMIDIMSERMTDVSINLKELLSKTKDTD 269
Query: 415 MASESTRLSALQTQQQLAVQALS 437
+A +L + + ++ +
Sbjct: 270 VAETQIQLITAEAVYKASLSVTA 292
>gi|261211315|ref|ZP_05925603.1| flagellar hook-associated protein FlgL [Vibrio sp. RC341]
gi|260839270|gb|EEX65896.1| flagellar hook-associated protein FlgL [Vibrio sp. RC341]
Length = 397
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/430 (10%), Positives = 103/430 (23%), Gaps = 54/430 (12%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N+ A+ +R + Q +++SG ++ A+DN Q + L D
Sbjct: 9 HNYQAV--QNDIRRQESKVFNNQAQLASGKKLLSASDNPLATHYIQNVGQQEEQLRQYLD 66
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
AI L ++++ + +S + + K + + + + LQ
Sbjct: 67 AIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQE------MA 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
S+F ++ + G+ + K F RD+ G V
Sbjct: 121 SNFLNLANVQDESGNYIFAGTKPKNQPFFRDNQGNVSYA--------------------- 159
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
D L G
Sbjct: 160 -------------------------GDDYQRKMKISNSLEIPFNNPGSKVFMEIPNPFGS 194
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
L + + ++ + + + +
Sbjct: 195 YEPNYALQEGSELLLERAVNLNPDDTAAYRVTFVDMPDGNNGYQLERNGSVVQAGEFDPK 254
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + + + + + + ++V
Sbjct: 255 TGIQFNELNIQVKGQITKGDAIDLTPRDTYSVFDTFRDAIRYAEGSVSDASNTAKLHQIV 314
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
T IG+ + + +QE+ + + ++ K D D A +
Sbjct: 315 EEFHTAFIHLNKTRTDIGARLNTLDIQEEQHEDFKISLAKSKSTFEDLDYADAVIEFNEN 374
Query: 426 QTQQQLAVQA 435
+ + +A
Sbjct: 375 SRALEASQKA 384
>gi|226326176|ref|ZP_03801694.1| hypothetical protein PROPEN_00018 [Proteus penneri ATCC 35198]
gi|225205422|gb|EEG87776.1| hypothetical protein PROPEN_00018 [Proteus penneri ATCC 35198]
Length = 80
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 32/70 (45%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
I TN+ ++ L L R+SSGLR++ A D+AA +IA S+ L+
Sbjct: 11 VINTNYLSLVTQNNLNRSQSALGNAIQRLSSGLRINSAKDDAAGQAIANRFTSNVKGLTQ 70
Query: 63 VSDAIGLGSS 72
+ G S
Sbjct: 71 AARNANDGIS 80
>gi|297538903|ref|YP_003674672.1| flagellar hook-associated protein 3 [Methylotenera sp. 301]
gi|297258250|gb|ADI30095.1| flagellar hook-associated protein 3 [Methylotenera sp. 301]
Length = 304
Score = 69.4 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/205 (9%), Positives = 63/205 (30%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN + ++ +I + +Q+++S+G R+S +D+ + A + + +
Sbjct: 3 ISTNTIYQAGISRISNIQSDQAKLQEQISTGRRISSPSDDPVGAARALEISAAQSGNAKF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+D K++ ++ ++ ++ + ++ + ++L+ L +
Sbjct: 63 ADTRQTAQLKLNTLESNLTSITSLLVSTQSTLVGAGNATLSDTERGFMASELKGSLDALI 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ + G T+++ S Q +
Sbjct: 123 GLANTQDASGNYLYAGYKTSTVPFVATASGANYAGDSNQQLLQVDTQRQMAINATGDNVF 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDV 208
+ V +
Sbjct: 183 QAGGNDVFATLSNLVTLLNTPITNA 207
Score = 49.7 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 39/135 (28%), Gaps = 5/135 (3%)
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
++ + + LN + + + +
Sbjct: 173 AINATGDNVFQAGGNDVFATLSNLVTLLNTPITNAASQAAYNAGLSTAIGSLKGSVDNVL 232
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
IG+ + I + K + L D D AS + L+ QT + A ++
Sbjct: 233 NVRADIGAKLNEIDNLDTAGSDRALQYSKSLSDLQDTDYASALSDLAKQQTIMEAAQKSF 292
Query: 437 SIVNNSTARILSLFR 451
+ + LSLF+
Sbjct: 293 VQITS-----LSLFK 302
>gi|288958565|ref|YP_003448906.1| flagellin domain protein [Azospirillum sp. B510]
gi|288910873|dbj|BAI72362.1| flagellin domain protein [Azospirillum sp. B510]
Length = 621
Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 55/327 (16%), Positives = 103/327 (31%)
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ S+ + ++ ++A + S + + T
Sbjct: 295 QTFSYTATSGDVATGQNAAKNVANQLKASISTAISSASGRLNGKSVATATVGTSGTITLT 354
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ R+ + +S ASGT+ + A + + + K
Sbjct: 355 GATTAGVVRDFTLTSSTTNALTKKISESFASGTVVSFTVDRRLLEAANNQGNGVSVIEKK 414
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ V G S A G + V A T S
Sbjct: 415 VDIQVQVTNSNGAQVTRDGKSDRGDGKLSGGEQAFTFDSGTVRLDVNAKTIKQAASANCS 474
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
N ++ + + D ++ + S + A + + ++ +++
Sbjct: 475 ANIVTKQISDANSKNDITVQLNETNTNSITVNAVNLSTSGQGLKLDAAQNNWTDRADIDK 534
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
V+ +D +A+ + + S I +E F K D + +G +L AD E L
Sbjct: 535 AVAGLDNAKATIRSASQSLSTNLSVITTRESFTKEFSDVLTEGANKLTLADQNEEGASLL 594
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLF 450
LQT+QQL ALS+ N S IL LF
Sbjct: 595 MLQTRQQLGTIALSLANQSQQSILRLF 621
Score = 59.0 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 85/248 (34%), Gaps = 7/248 (2%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+ +L+ + + Q+ +++G +++ A D + A+ + G LS++ DA+G
Sbjct: 13 TNLLQLQGVQKMIAQKQNTLATGNKINSALDGPTDFFAAKGLTQRAGDLSSLKDAMGQSI 72
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKIT-------AGVERGTDSKSIQSEITQLQSQLRDIAR 124
S + A G++K D++ K T K++ + L+ Q+ +A
Sbjct: 73 STIKAADKGLTKIGDLVDQAKGLTTAAYAALGNDAASIATRKALAGQFNTLRDQIDKLAA 132
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
S + G+N + + S ++ A + I + I S +G
Sbjct: 133 DSQYGGKNLINGNGLSLDSTSASRAAVNTITGVSNARVTNVISADTYAIRFKGTGSIEGK 192
Query: 185 ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKG 244
+N ++ + + + + + + + + +
Sbjct: 193 TDDINKAQNSHGLTGLKLSGTMSSTTGNFADVQIEVRGANGRSRDFIVSDGKESRTISYF 252
Query: 245 IATIPVPL 252
+ +
Sbjct: 253 DNSQTIDT 260
>gi|238916200|ref|YP_002929717.1| flagellar hook-associated protein 3 FlgL [Eubacterium eligens ATCC
27750]
gi|238871560|gb|ACR71270.1| flagellar hook-associated protein 3 FlgL [Eubacterium eligens ATCC
27750]
Length = 518
Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/379 (7%), Positives = 92/379 (24%), Gaps = 3/379 (0%)
Query: 6 TNHSAMSAS-QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN +++S ++ + + +S+ ++S +D+ A ++S ++
Sbjct: 4 TNQMMINSSISNIQVNKNQINTLSTELSTQKKISKPSDDPIIAIRALRLRSSLDEVTQYL 63
Query: 65 -DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I SS + + + ++ ++ + G + L +
Sbjct: 64 GKNIPDASSWLSVTHDALDESNSIIKDLYKYCVQGSTDSYSESERNTLAESLNKLVEAYY 123
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ + G +T + ++ + + L +T ++ ++
Sbjct: 124 EQGNVDYAG-RYVFTGHATDRPLTYQSDADAKNVDYSITQNFTREDLSTKTAYTNAYSND 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + ++ ++ + + NA
Sbjct: 183 DILNLTVKTDANGNIITPNIQSVNRIQLAYDEINGGTFTLGMGNNNSANVTINADGTVTM 242
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ A + + P I + + + +
Sbjct: 243 NGSLTADITQADGSVVQNQVSVVTTSDPDYIPGDNEIAINATTGELLLGQNVYQSVYQNN 302
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
S + N + D + + S I + N +
Sbjct: 303 EFSVTYEKSNFIKGDIDPTMYFDCVDNNTGVVYDKKSEDIEYIVNFSQKLKVNTEADEAF 362
Query: 364 MVSFIDTQIKCATAAAGKI 382
+ +
Sbjct: 363 NIYLGRNVNDLVNTVQNVL 381
Score = 49.7 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 37/361 (10%), Positives = 89/361 (24%), Gaps = 5/361 (1%)
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+K+ + L + + + + G
Sbjct: 160 ITQNFTREDLSTKTAYTNAYSNDDILNLTVKTDANGNIITPNIQSVNRIQLAYDEINGGT 219
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
G + D + S T + +++ V D +
Sbjct: 220 FTLGMGNNNSANVTINADGTVTMNGSLTADITQADGSVVQNQVSVVTTSDPDYIPGDNEI 279
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA---PAAPNTTSGTSGSKS 270
+ +T + L + N + I + N T KS
Sbjct: 280 AINATTGELLLGQNVYQSVYQNNEFSVTYEKSNFIKGDIDPTMYFDCVDNNTGVVYDKKS 339
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ + + + + + +TV V + + + +
Sbjct: 340 EDIEYIVNFSQKLKVNTEADEAFNIYLGRNVNDLVNTVQNVLDIDAQISKVESMQKDSQY 399
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
+ +T+ + K A E + + + + A +G+ R+
Sbjct: 400 SDDASQEKLKTIMEGLTKQRDFAKSEMKNAFEAGIGQMQGYMDQVSNAKADVGNRQIRLD 459
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
L + + + + D D+ ++ + Q A+ A S V +L
Sbjct: 460 LTKTRLTEQKTNFTDLKSQNEDIDLEEIVVTYTSAELVYQAALSAASKV--VQQSLLDFL 517
Query: 451 R 451
R
Sbjct: 518 R 518
>gi|27380954|ref|NP_772483.1| flagellin [Bradyrhizobium japonicum USDA 110]
gi|27354120|dbj|BAC51108.1| bll5843 [Bradyrhizobium japonicum USDA 110]
Length = 763
Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 51/105 (48%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ N + + A ++++ ++ + +GS S + +++DF K + + ++ G
Sbjct: 659 SNLVNGVDFIDNGATNKVLTSLNAASSTLRSEGSALGSNLSIVQVRQDFSKNLINVLQTG 718
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L AD E+ AL T+Q +AV ALS+ N S +L L R
Sbjct: 719 SSNLTLADTNEEAANSQALSTRQSIAVSALSLANQSQQSVLQLLR 763
Score = 67.1 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/253 (14%), Positives = 77/253 (30%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M++I+ + S L+ L Q+R+S+G +V+ A DN + AQ + + +
Sbjct: 1 MSNIVLSASVRQNLLSLQSTADLLATTQERLSTGKKVNTALDNPTNFFTAQGLDNRASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S + D I G + A G++ ++ + K+ ++ + + T +
Sbjct: 61 SNLLDGINNGVQVLQAANTGITSLQKLIDSAKSIANQALQTTVGYSTKSNVSTTIPGATP 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
RG++ +++ + A+ + + +
Sbjct: 121 ADLRGTTSYASATANSNVLYTGAAGGVTPVTGTAALGASLGSNAGSAVGFAATAADGTTV 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
GT + P I V+ + T G AT
Sbjct: 181 LSGTATLLGTTASTTFGAPPADGDTITVNGKTITFRTGIPPTTQPTGWGLDASGHIATDG 240
Query: 241 QAKGIATIPVPLP 253
I +
Sbjct: 241 NGNSIVYEGTAVA 253
>gi|224825171|ref|ZP_03698277.1| flagellar hook-associated protein 3 [Lutiella nitroferrum 2002]
gi|224602842|gb|EEG09019.1| flagellar hook-associated protein 3 [Lutiella nitroferrum 2002]
Length = 304
Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 58/159 (36%), Gaps = 3/159 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ ++ Y L +Q+++S+ RV +D+ + + G
Sbjct: 3 ISTSMVFTQGYTGIQGNQYTLNKLQEQLSTQKRVVVPSDDPVASAQMLEVSQSEGRNLQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKS---IQSEITQLQSQLR 120
S + I++ ++ A +++++K G + IQ+++ + +QL
Sbjct: 63 VKNGDAVESSLAISETSLNSANGLLASLKELAIQAGNGGLATTQLKMIQTDVKERFNQLV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
A S G + S +A S + D G
Sbjct: 123 SYANTSDSRGNYLYGGNAIDSPPFVADSSLNVTYTGDTG 161
Score = 40.1 bits (91), Expect = 0.85, Method: Composition-based stats.
Identities = 27/210 (12%), Positives = 55/210 (26%), Gaps = 5/210 (2%)
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
QA L S + + + Y+ GN+ +S+
Sbjct: 96 QAGNGGLATTQLKMIQTDVKERFNQLVSYANTSDSRGNYLYGGNAIDSPPFVADSSLNVT 155
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ V + + ++ + N
Sbjct: 156 YTGDTGRRDVQISAERQVPITEVGSAVYGNASSDTAVFDTVRDFYNLLGQDPKPANFSTQ 215
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ++S +D + IGS S + + + + + L D D+ +
Sbjct: 216 LSSILSGLDAAQVNLSTVQASIGSRRSENETLQSVGQDLDVQYKTRLSNLDDLDLPKTIS 275
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ Q A+Q S + LSLF
Sbjct: 276 DFT----LAQSALQ-YSQLTFQKVSGLSLF 300
>gi|237653576|ref|YP_002889890.1| flagellar hook-associated protein FlgL [Thauera sp. MZ1T]
gi|237624823|gb|ACR01513.1| flagellar hook-associated protein 3 [Thauera sp. MZ1T]
Length = 302
Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/170 (13%), Positives = 52/170 (30%), Gaps = 3/170 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN L+ + L ++++G ++ +D+ + A +
Sbjct: 3 VSTNMIYDQGVIALQKQSAALLHTGQQIATGRKILTPSDDPVASARALDVSQSKSVNQQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR--- 120
G + + + A +++ + ++ A QS + L+SQ
Sbjct: 63 ITNQGYADDALKLVDGQLDGAGEIIQYARERVLAAGNPALSPSDRQSIASDLRSQFDAML 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL 170
IA NG+ ++ G+ D G T+
Sbjct: 123 AIANTRDANGDYLFAGYRSNTPPFEKTVTAGTLGSDYKGDQGSRTMQVSS 172
Score = 48.2 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 27/76 (35%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A+ + +D + +IGS + + + + L D D
Sbjct: 213 AVSTALGGLDDSLDRTLTVRAQIGSQQVEVEQLGFIGSDLDLQYQTTLSNLQDLDYNEAI 272
Query: 420 TRLSALQTQQQLAVQA 435
+RL+ +T + A Q+
Sbjct: 273 SRLTQQRTFLEAAQQS 288
>gi|328543147|ref|YP_004303256.1| Bacterial flagellin N-terminus domain protein [polymorphum gilvum
SL003B-26A1]
gi|326412893|gb|ADZ69956.1| Bacterial flagellin N-terminus domain protein [Polymorphum gilvum
SL003B-26A1]
Length = 386
Score = 69.0 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+++ + + + L+ + + VQ+R+S+G +V+ A DN + A+ +++ L
Sbjct: 1 MSNVTLSSAVRTNLNALQATSQMMSSVQERLSTGKKVNSALDNPNSFFTAKGLENRASDL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD--SKSIQSEITQLQSQ 118
S + D +G + A G+S D++ K K + E +L +Q
Sbjct: 61 STLLDDMGQSVQTLKAADKGISAISDLVDAAKAKANQAAQTSNQKERAQYTKEFNELLTQ 120
Query: 119 LRDIARGSSFNGENWLRTDL 138
+ D+A+ + + G+N L
Sbjct: 121 IEDVAKDAGYKGKNLLGGTG 140
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 56/136 (41%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
T K + ++ T +A + + + ++S +
Sbjct: 251 TDLTGGALTVTSDFKLSVSSSSTAFNSNAALTTNNATESGFAKDSDINAVLSKLQKAQDT 310
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ A G+ S + ++DF K M + +++G G+L AD E L ALQTQQ LA
Sbjct: 311 LRSQASTFGTNLSIVQNRQDFTKAMINTLQEGAGKLTLADTNEEGANLLALQTQQSLAST 370
Query: 435 ALSIVNNSTARILSLF 450
ALS+ + +L LF
Sbjct: 371 ALSLAAQADQNVLRLF 386
>gi|37927279|pdb|1ORY|B Chain B, Flagellar Export Chaperone In Complex With Its Cognate
Binding Partner
Length = 55
Score = 69.0 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 21/53 (39%)
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+D + + + D A E T + Q + Q V L+ N +L L R
Sbjct: 3 AKDNTDNAESIIRNVDFAKEMTEFTKYQIRMQSGVAMLAQANALPQLVLQLLR 55
>gi|23007578|ref|ZP_00049388.1| COG1344: Flagellin and related hook-associated proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 242
Score = 69.0 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 47/94 (50%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
++ ++ + + +A+ GS S + ++DF K + + ++ G L +AD+
Sbjct: 149 DTDIKTTLTGLSSASDTLRSASSTFGSNLSVVQNRQDFTKRLINILDTGASNLTNADLNE 208
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q L + ALS+ N + IL L R
Sbjct: 209 EAANSQALSTRQSLGISALSLANQAQQGILQLLR 242
>gi|4760477|dbj|BAA77300.1| flagellin [Pseudomonas putida]
Length = 115
Score = 69.0 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 3/114 (2%)
Query: 44 AAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE--- 100
AA IA + S L G S A+ M + D++ ++ +
Sbjct: 1 AAGLQIANRLTSQINGLGQAVKNANDGISIAQTAEGAMQASTDILQKMRTLALSSATGSL 60
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
D KS E L ++L I+ ++F G+ L G+ + + +
Sbjct: 61 SADDRKSNNDEYQALTAELNRISETTTFGGQKLLDGSYGTKAIQVGANANETIN 114
>gi|330818577|ref|YP_004362282.1| flagellar hook-associated protein FlgL [Burkholderia gladioli BSR3]
gi|327370970|gb|AEA62326.1| flagellar hook-associated protein FlgL [Burkholderia gladioli BSR3]
Length = 409
Score = 69.0 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/451 (13%), Positives = 118/451 (26%), Gaps = 50/451 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ + + + + + +V+SG + ADN + A + + + LS
Sbjct: 3 IATSQFYTQNIELMNNQESQISTLYQQVASGNLLQTPADNPLGAAQAVQLSATSATLSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTI---KNKITAGVERGTDSKSIQSEITQLQSQLR 120
S S + + + +S +++I + G +D ++ S++ + L
Sbjct: 63 SANQNTALSALGLEDSTLSSVTGTLNSIVSRLSSAINGTMSDSDRAALASQLQGQRDTLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G GSS G D G+ + D + +
Sbjct: 123 SLANTTDGAGNYIFAGFQGSSQPFTNSPAGGVTFSGDTGQRNVQISDTLSVAQGDSGVNV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G L
Sbjct: 183 FLSVPSTGSLPVPTGAAGNTGTG------------------------------------- 205
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
V N + T S A + T + A S
Sbjct: 206 -----TIGAVTAGKPGDPTNNHAYTITFGGTSTAPTYTVTDNSTTPPTTGAAQAYQAGSA 260
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ ++ G+ + T + + +
Sbjct: 261 IQVGSQSLVISGSPNAGDSFSLTPAPAAGADIFGALDAAIAALKAPVGSDGAATASFVNS 320
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
M ++ ++ + T +G + + + + L ADM + T
Sbjct: 321 MSTALTKVNNSLANITTVQASVGGRETEVKAMQTITSSNALVATNSLSDLQQADMPTAIT 380
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+L +Q A +A S V N LSLF+
Sbjct: 381 QLLQVQNALTAAQKAFSQVQN-----LSLFQ 406
>gi|153825353|ref|ZP_01978020.1| flagellar hook-associated protein FlgL [Vibrio cholerae MZO-2]
gi|149741037|gb|EDM55106.1| flagellar hook-associated protein FlgL [Vibrio cholerae MZO-2]
Length = 397
Score = 69.0 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/430 (10%), Positives = 102/430 (23%), Gaps = 54/430 (12%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N+ A+ +R + Q +++SG ++ A+DN Q + L D
Sbjct: 9 HNYQAV--QNDIRRQESKVFNNQAQLASGKKLLSASDNPLATHYIQNVGQQEEQLRQYLD 66
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
AI L ++++ + +S + + K + + + + LQ
Sbjct: 67 AIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQE------MA 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
++F ++ + G+ + K F RD+ G V
Sbjct: 121 NNFINLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYA--------------------- 159
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
D L G
Sbjct: 160 -------------------------GDDYQRKMKISNSLEIPFNNPGSKVFMEIPNPFGS 194
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
L + + + + + + +
Sbjct: 195 YEPNYALQEGSELLLERAVNLNPDDTASYRVTFVDMPEGKNGYQLERNGSVVQAGEFDAK 254
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + S + + + + ++V
Sbjct: 255 TGIQFEELNIQVKGQISKGDAIELRPRTTFSVFDTFRDAIRYAEGSVSDASNTAKLHQLV 314
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
T IG+ S + +QE+ + + ++ K D D A +
Sbjct: 315 EEFHTAFIHLNKTRTDIGARLSTLDIQEEQHEDFKISLAKSKSTFEDLDYAEAVIEFNEN 374
Query: 426 QTQQQLAVQA 435
+ + +A
Sbjct: 375 SRALEASQKA 384
>gi|253702424|ref|YP_003023613.1| flagellar hook-associated protein 3 [Geobacter sp. M21]
gi|251777274|gb|ACT19855.1| flagellar hook-associated protein 3 [Geobacter sp. M21]
Length = 306
Score = 69.0 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 55/149 (36%), Gaps = 3/149 (2%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
+A +A L+ +++ +Q++V+SG ++ +D+ ++ A S I
Sbjct: 7 MTAENALYNLQKGRSSIDSLQEQVASGFNINRPSDDPLSARQLLDLQEQIAAGDQYSSNI 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKI---TAGVERGTDSKSIQSEITQLQSQLRDIAR 124
+D+ ++ ++ +K +G + T + +TQL+SQL D+
Sbjct: 67 TKADLLLDVTSTALTSMAGLLQQVKKIAGDMVSGTQDATTVSGAVTNLTQLKSQLIDMGN 126
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+ + ++
Sbjct: 127 TRVGDQYVFAGFKNSPPFDTLGNFSGTDD 155
>gi|299131800|ref|ZP_07024995.1| conserved hypothetical protein [Afipia sp. 1NLS2]
gi|298591937|gb|EFI52137.1| conserved hypothetical protein [Afipia sp. 1NLS2]
Length = 539
Score = 69.0 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 47/95 (49%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + ++S +D A +GS S + +++DF K + + ++ G L AD
Sbjct: 445 DNSSANSVISSLDKASSTLRTEASALGSNLSIVQIRQDFSKNLINVLQTGSSNLTLADTN 504
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV AL++ N S +L L R
Sbjct: 505 EEAANSQALSTRQSIAVSALALANQSQQSVLQLLR 539
Score = 59.0 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 48/116 (41%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ + S L+ L Q+R+++G +V+ A DN + A + + +
Sbjct: 1 MSDIVLSASVRQNLLSLQSTADLLSTTQNRLATGKKVNTALDNPTNYFTAASLDNRASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ 116
S + D IG G + A G++ ++ + K+ ++ + S +
Sbjct: 61 SNLLDGIGNGVQVLQAANTGITSLQKLVDSAKSVANQALQATVGYSTKSSISATIT 116
>gi|317152828|ref|YP_004120876.1| flagellar hook-associated protein 3 [Desulfovibrio aespoeensis
Aspo-2]
gi|316943079|gb|ADU62130.1| flagellar hook-associated protein 3 [Desulfovibrio aespoeensis
Aspo-2]
Length = 397
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/434 (9%), Positives = 108/434 (24%), Gaps = 50/434 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + ++ ++ + SS +++ +D+ ++ + LS
Sbjct: 3 ISTPQIFSQSLNQINSSLIDVAKLNSINSSQKKLNSPSDDPFGMGTVIELRGYDKTLSGY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + +A + +A ++++ + + + +Q ++ S L +
Sbjct: 63 VNNCKTAAESLSLADDILLQASEIITAAREQAEQAASETYTAAQLQMMADEMASYLDSLM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ +
Sbjct: 123 TM--------------------------------------------ANTQMGTDSIFGGD 138
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + + L + + + +L T ++
Sbjct: 139 SLDSTAYEMGLGVTMTNDSLSNASFVSIEGELDSAVVSVRLGTDGVIGTDEIEYSYSTDG 198
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
G L A + S + + A G I +A +
Sbjct: 199 GETWTSATLAAGDTVLDLGSCQVELAAGTAVTEADGDGEGTEFIVRKAAVYTGSDTAMTV 258
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
S + V T G + I+ +
Sbjct: 259 AISGSSTVAMTTVGSSVFGGV------DQSGAGYGEPNLFETISNCIAFMETGNHAGVAA 312
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ + + + AA IG+ +++ + I +R + R+ DAD A L
Sbjct: 313 CLDELRSAQESLEAANANIGARENKVTYTSEAISQVRTITGNSISRVEDADAAQILVELE 372
Query: 424 ALQTQQQLAVQALS 437
+ + + +
Sbjct: 373 QANYVYEAVLTSSA 386
>gi|326796590|ref|YP_004314410.1| flagellar hook-associated protein 3 [Marinomonas mediterranea
MMB-1]
gi|326547354|gb|ADZ92574.1| flagellar hook-associated protein 3 [Marinomonas mediterranea
MMB-1]
Length = 404
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/427 (10%), Positives = 102/427 (23%), Gaps = 43/427 (10%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
+Q L N + +++S + +D+ +++N +
Sbjct: 7 MMYTQTAQSLAKANERYMNINEKISEESSIVRPSDDPNGAGQVLNYQAENARNDQYEKTM 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSS 127
L + +D + + M + D ++S +L + +A +
Sbjct: 67 TLAKNALDYEEVSLDSLNTSMDRANRLLIQAQNSANDDVDLESIAEELSLIVDSMADLMN 126
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
N GS +AS S G+ G + D+ +
Sbjct: 127 SKDANGNYIFSGSDSASPTMSKNGAGEYVYGGNETQNYAQIADGVSIPVNDTGKKVFQDV 186
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ V DA + T + + T
Sbjct: 187 WTRNTFTATVTAGGATLTSLVDDQDAYDKFVDDNYDAITPANNTYTLSTTAGAPNSYSFT 246
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
+ + SA D
Sbjct: 247 DVNGNVVDSGTYEDGNAINVMGMSFTMDSAGSTVSVTLDT-------------------- 286
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
++ T+++ + +N + A+ + +
Sbjct: 287 -----------------------PTRDNVLNELNNTISVLKDSNATSAERTAALRDATTS 323
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
I + A ++GS + I +E +I + + + D++ +T L + T
Sbjct: 324 IKNTQETVGTALSEVGSRINTISAREGYISSKETSNTLAMNEIAGIDLSEAATELQSANT 383
Query: 428 QQQLAVQ 434
Sbjct: 384 AVSATQS 390
>gi|253702669|ref|YP_003023858.1| flagellin domain protein [Geobacter sp. M21]
gi|251777519|gb|ACT20100.1| flagellin domain protein [Geobacter sp. M21]
Length = 547
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 2/124 (1%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDI 76
L Q+R++SG RV+ + D+ + + A +K+ LS V D I V
Sbjct: 19 LTKTAKLTNRTQERLASGKRVNSSLDDPSNFFAAMELKNYADDLSLVHDNINNTIQTVKA 78
Query: 77 AKAGMSKAIDVMSTIKNK--ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
A G+S +++ +K+ QL SQ+ + SS+NG N +
Sbjct: 79 ASNGISAVSTLIAGMKSLVDAARITSDPAAKAKFARSYDQLYSQINSVVSDSSYNGGNLI 138
Query: 135 RTDL 138
+
Sbjct: 139 SDND 142
Score = 60.5 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ 434
+ GS S+ + ++ + + V G L ADM E+ + LQT+Q L+
Sbjct: 472 LRTESANFGSGSTILVTRDTLASEIANIVRTGSDNLTAADMNEEAANMLMLQTRQSLSTT 531
Query: 435 ALSIVNNSTARILSLF 450
+LSI + S+ +L LF
Sbjct: 532 SLSIASQSSQIVLKLF 547
>gi|257484938|ref|ZP_05638979.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 255
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/253 (11%), Positives = 76/253 (30%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + + N+ + VSSG++++ A+D+ + + N L+
Sbjct: 3 ISTTQFYESTNTNYQRTYSNVLKTSEEVSSGIKLNTASDDPVGAARVLQLAQQNSMLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ IG ++ + ++ ++ +D M T + I + ++ +L+ +
Sbjct: 63 ASNIGTINTNIVNSETALTSIVDTMQTAREVIVSAGNGAYTDSDRLAKAAELKQYQSQLL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ N GS +++ + +G + + +
Sbjct: 123 GLMNSQDSNGQYIFAGSKSSAPPYAQNADGTYSYSGDQTSVNLAIGDGLVLPSNTTGYEA 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
E+ R + P + S + + T +
Sbjct: 183 FEQAVNTTRTSSTLLSPATDDGKVGLTGGQVTSTSAYNSGYQAGEPYTMTFLSGTQFKIT 242
Query: 244 GIATIPVPLPAAP 256
+ V A+
Sbjct: 243 DASGTDVTTDAST 255
>gi|149189843|ref|ZP_01868123.1| flagellar hook-associated protein L [Vibrio shilonii AK1]
gi|148836329|gb|EDL53286.1| flagellar hook-associated protein L [Vibrio shilonii AK1]
Length = 299
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 51/143 (35%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + Q L+ N L V ++++G R++ +D+ + + A++
Sbjct: 3 ISDTQFSQMMLQSLQTNNAGLGKVLQQMATGDRLTKLSDDPMASIQLLNLDREGSAINQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + + +++ + G + IT+L+S I
Sbjct: 63 QRNIANVKTTLSSQEVYLDSVNESLKSMRELVLWGSNGTLTDEDRDGMITELESLRDSIE 122
Query: 124 RGSSFNGENWLRTDLGSSTASIA 146
+ E G+ T + A
Sbjct: 123 SSFNAQDEEGHYLFSGTKTDTPA 145
>gi|302671034|ref|YP_003830994.1| flagellin FliC5 [Butyrivibrio proteoclasticus B316]
gi|302395507|gb|ADL34412.1| flagellin FliC5 [Butyrivibrio proteoclasticus B316]
Length = 254
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 66/185 (35%), Gaps = 3/185 (1%)
Query: 31 VSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMST 90
++SG ++ A+++A+ +I + KS L A S+ + S ++I +S D + +
Sbjct: 19 IASGGTINKASEDASGLAIQEKTKSQVNGLDAGSENLTSAKSALNIQDGALSGVEDYLQS 78
Query: 91 IKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
IK + D +SIQ++I + + D+A +++N +N D AS
Sbjct: 79 IKELSVKAMNGTLSQDDKESIQTQIKEYLKGINDLAESTTYNEKNLTNNDGSLKVASDGN 138
Query: 148 SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
S + + +Y + + + + +
Sbjct: 139 GSTESVATHNATTDALGISEYDVTGNFDMSVIDKAIEKVSSQRAETGAQTNGVESALTYN 198
Query: 208 VSVYD 212
Sbjct: 199 SHAAM 203
>gi|149194322|ref|ZP_01871419.1| flagellar hook-associated protein L [Caminibacter mediatlanticus
TB-2]
gi|149135497|gb|EDM23976.1| flagellar hook-associated protein L [Caminibacter mediatlanticus
TB-2]
Length = 846
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/379 (7%), Positives = 90/379 (23%), Gaps = 7/379 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M+ L L Q +S+G ++ + DN+ ++ + ++ + + +
Sbjct: 1 MNNQTTL----SELNKTQTELSTGKKIQNLYDNSTIYNNYLKLDTEINTFTQIKSSANFA 56
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR---DIARGSS 127
+ + ++ + ++ K K+ D S ++ +++L+ +L D+A S
Sbjct: 57 LNFARESDTTLNDIVSTLTNFKTKLINAANDTNDITSREAIVSELKGELNHLKDLANSSI 116
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
+ + + G+ +Y + + L D +
Sbjct: 117 NGKYIFSGSAFNIKPIDDDFNYQGNDKYVKAFLGSGIEREYNIPGSELFLGRDNDYKKTM 176
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ + + + + + + +
Sbjct: 177 TVNIPQYNKMKANPEFVVMGADGKLYIDKNNPNTYSQDVAVNEPINVNSKIRELTGVEDI 236
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
++ + + + + +
Sbjct: 237 DNGNGTYTSGTSYFYIKGRRPDGTTINTKFSLSNDDSVSDLLNKIGEIYGNTVTNKVVDV 296
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
D S + S + S+ L + +
Sbjct: 297 SLNDIGEIQITDLNSGKMISDFFMVASNKDEASVEDLVKNGDYIVEFQKSYYPSAPSLDT 356
Query: 368 IDTQIKCATAAAGKIGSIS 386
I + K G+
Sbjct: 357 ITSNNSNFDNRVFKFGAYY 375
Score = 58.2 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/321 (10%), Positives = 82/321 (25%)
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I S +++ +I +++ + + D +
Sbjct: 517 NTILGNYSNIEKDYKIILKDGEKIIENNPNAQQYITNNSVIMDVMGSDTSPQTLDIKFRD 576
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + ++ +
Sbjct: 577 INGELKTASITLDDNGSYFTINGNSYHIYDTNGNISPAHDIIKTTTELDPTTCEICTKEN 636
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + N S +A D R K+
Sbjct: 637 LNKGMTFKQLGDVISMLVTNNLPLTDDASSYNEAVKNAKKEVETGIDDKGRFYLKDLSNF 696
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
S K N ++ + T + D + + S V +
Sbjct: 697 KTKIDLSISNKDSNIYFQANNSLTIDSPQVDFFETLQKAISSVENGENFANANSNNPRDI 756
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ + ID + + KIG++S+ + + +++ VE +D D+ S
Sbjct: 757 GIQGAIKAIDHVLDRVRRSHAKIGAVSNEFDMTIQRVDMLKVNVETLQSENIDTDIGEAS 816
Query: 420 TRLSALQTQQQLAVQALSIVN 440
+L++LQ Q + +++ +N
Sbjct: 817 MKLNSLQLSYQALLASIAKIN 837
>gi|2443634|gb|AAC33159.1| hook associated protein [Vibrio cholerae]
Length = 397
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/430 (10%), Positives = 102/430 (23%), Gaps = 54/430 (12%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N+ A+ +R + Q +++SG ++ A+DN Q + L D
Sbjct: 9 HNYQAV--QNDIRRQESEVFNNQAQLASGKKLLSASDNPLATHYIQNVGQQEEQLRQYLD 66
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
AI L ++++ + +S + + K + + + + LQ
Sbjct: 67 AIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQE------MA 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
++F ++ + G+ + K F RD+ G V
Sbjct: 121 NNFINLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYA--------------------- 159
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
D L G
Sbjct: 160 -------------------------GDDYQRKMKISNSLEIPFNNPGSKVFMEIPNPFGS 194
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
L + + + + + + +
Sbjct: 195 YEPNYALQEGSELLLERAVNLNPDDTASYRVTFVDMPEGKNGYQLERNGSVVQAGEFDAK 254
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + S + + + + ++V
Sbjct: 255 TGIQFEELNIQVKGQISKGDAIELTPRTTFSVFDTFRDAIRYAEGSVSDASNTAKLHQLV 314
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
T IG+ S + +QE+ + + ++ K D D A +
Sbjct: 315 EEFHTAFIHLNKTRTDIGARLSTLDIQEEQHEDFKISLAKSKSTFEDLDYAEAVIEFNEN 374
Query: 426 QTQQQLAVQA 435
+ + +A
Sbjct: 375 SRALEASQKA 384
>gi|307945675|ref|ZP_07661011.1| flagellin [Roseibium sp. TrichSKD4]
gi|307771548|gb|EFO30773.1| flagellin [Roseibium sp. TrichSKD4]
Length = 388
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/222 (16%), Positives = 79/222 (35%), Gaps = 2/222 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT I + S L+ + + VQ+++++G +V+ A DN + A+ +++ L
Sbjct: 1 MTDIAITSAVRSNLNALQSASSLISGVQEKLATGKKVNSALDNPNSFFTAKGLENRANDL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG--TDSKSIQSEITQLQSQ 118
+ + D G + A G+ +++ K K ++ ++ + E +L +Q
Sbjct: 61 ATLLDDQGQSIQTLKAADKGIGAIGELVDAAKAKANQALQTSSISEREQFSKEYNELLTQ 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ DIA+ SS+ G+N L + + + +
Sbjct: 121 IEDIAKDSSYKGKNLLGGTGNDLNVTFNEDGSSDLDISAVDYTDTSNAKGLNLSDLNSST 180
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
T+ Q++ D + TI+
Sbjct: 181 GGTNSISLNNDGATGDPALTGSQLVTLDDAFSAGDTLTITNT 222
Score = 49.0 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 61/396 (15%), Positives = 130/396 (32%), Gaps = 10/396 (2%)
Query: 55 SDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQ 114
+D SAV + + A + +S + ++T K +A + + E
Sbjct: 2 TDIAITSAVRSNLN----ALQSASSLISGVQEKLATGKKVNSALDNPNSFFTAKGLENRA 57
Query: 115 LQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
D+A G++ ++ + N +Q ++I
Sbjct: 58 -----NDLATLLDDQGQSIQTLKAADKGIGAIGELVDAAKAKANQALQTSSISEREQFSK 112
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ T + K + D++V+ + + T +
Sbjct: 113 EYNELLTQIEDIAKDSSYKGKNLLGG-TGNDLNVTFNEDGSSDLDISAVDYTDTSNAKGL 171
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
+ + + G +G+ ++ + + N+ T
Sbjct: 172 NLSDLNSSTGGTNSISLNNDGATGDPALTGSQLVTLDDAFSAGDTLTITNTAGEETTFTI 231
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA 354
T+ + +T V + + + S + + + N + +
Sbjct: 232 TETTTVTELNTAISNSSTDTSSSVGSGAINITSSDNAVQIKSDNSAFNGGNTLQVGTLGS 291
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ +E +S + + A A G+ S + +EDF K + + +E+G G+L AD
Sbjct: 292 FGSDSDIESTLSSLKSAQDTLRAQASTFGTNLSIVQNREDFTKALINTLEEGAGKLTLAD 351
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
E L ALQTQQQLA +LS+ + ++ +L L
Sbjct: 352 TNQEGANLLALQTQQQLASTSLSLASQASQNVLRLI 387
>gi|34497950|ref|NP_902165.1| flagellin [Chromobacterium violaceum ATCC 12472]
gi|34103805|gb|AAQ60166.1| flagellin [Chromobacterium violaceum ATCC 12472]
Length = 285
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 74/203 (36%), Gaps = 3/203 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ +L + + ++SSG ++ AADNAA +IAQ +++ +
Sbjct: 3 LTVNTNLASLAGQYQLNKTHNATKQTLAQLSSGSMLNSAADNAANLAIAQQLQAQINGSN 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
+ G S + A + +S+ D I++ ++ +++Q ++ QL
Sbjct: 63 QAINNTNDGVSMLQTADSALSQLQDNTQQIQDLAIQAGNGALNASNRQALQQQVDQLTQS 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
I + + FNG L S+ + I + L+ L
Sbjct: 123 NSQIIQSTQFNGTQLLNNSNASTFQVGPNGTASNQISVPGIDLTGAPASGGLNSYNANLA 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQ 201
++ +
Sbjct: 183 ATKTIDITTQANALAAQQSATSD 205
Score = 54.7 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/180 (12%), Positives = 51/180 (28%)
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ A ++ +++ + N++ A + D
Sbjct: 105 NASNRQALQQQVDQLTQSNSQIIQSTQFNGTQLLNNSNASTFQVGPNGTASNQISVPGID 164
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
L SG T + + + + +G++S+
Sbjct: 165 LTGAPASGGLNSYNANLAATKTIDITTQANALAAQQSATSDLNTIGSQRATLGAVSNSFD 224
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ ++ R+ D D A+ + RL+A Q + A + N + LSL
Sbjct: 225 AVVNNLQNSSLNTAAAQSRISDTDFAAATARLTAQQILGRTAAATQAQANIAPQAALSLL 284
>gi|225166339|ref|ZP_03728022.1| flagellin domain protein [Opitutaceae bacterium TAV2]
gi|224799419|gb|EEG17965.1| flagellin domain protein [Opitutaceae bacterium TAV2]
Length = 291
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 6/128 (4%)
Query: 6 TNHSAMSA---SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
TN A ++ L L+ R+ SG R+ AD+ A A S L+A
Sbjct: 2 TNTLASNSRVLLSSLNRNQTTLDRHLARLGSGTRLLTPADDPAGTRTAAKADSQRARLAA 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQL 119
+ I G+S++ + ++ D ++ + T D + E QLQ QL
Sbjct: 62 ATINIQNGTSRLQTTDSYLTSLGDTLTRMSELATYARNEVLSPDDVDLYRREFVQLQEQL 121
Query: 120 RDIARGSS 127
R + G+
Sbjct: 122 RTVIGGTQ 129
Score = 67.1 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 37/91 (40%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ + + T +G+ SR+ D I A+E R+ D D+A+ +
Sbjct: 198 TAPDAIATLQDALSQITTGLIAVGATQSRLSHASDTINSTDAALESQTSRIRDVDIAAST 257
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLF 450
T L Q Q LS + ++LSL
Sbjct: 258 TALVRQQVLTQSHTSMLSQTREMSTKLLSLL 288
>gi|15642189|ref|NP_231821.1| flagellar hook-associated protein FlgL [Vibrio cholerae O1 biovar
El Tor str. N16961]
gi|121726564|ref|ZP_01679813.1| flagellar hook-associated protein FlgL [Vibrio cholerae V52]
gi|147674282|ref|YP_001217707.1| flagellar hook-associated protein FlgL [Vibrio cholerae O395]
gi|153213628|ref|ZP_01948901.1| flagellar hook-associated protein FlgL [Vibrio cholerae 1587]
gi|153817065|ref|ZP_01969732.1| flagellar hook-associated protein FlgL [Vibrio cholerae NCTC 8457]
gi|153820859|ref|ZP_01973526.1| flagellar hook-associated protein FlgL [Vibrio cholerae B33]
gi|153829327|ref|ZP_01981994.1| flagellar hook-associated protein FlgL [Vibrio cholerae 623-39]
gi|227082314|ref|YP_002810865.1| flagellar hook-associated protein FlgL [Vibrio cholerae M66-2]
gi|229507733|ref|ZP_04397238.1| flagellar hook-associated protein FlgL [Vibrio cholerae BX 330286]
gi|229512072|ref|ZP_04401551.1| flagellar hook-associated protein FlgL [Vibrio cholerae B33]
gi|229513834|ref|ZP_04403296.1| flagellar hook-associated protein FlgL [Vibrio cholerae TMA 21]
gi|229519208|ref|ZP_04408651.1| flagellar hook-associated protein FlgL [Vibrio cholerae RC9]
gi|229522139|ref|ZP_04411556.1| flagellar hook-associated protein FlgL [Vibrio cholerae TM
11079-80]
gi|229528805|ref|ZP_04418195.1| flagellar hook-associated protein FlgL [Vibrio cholerae 12129(1)]
gi|229607237|ref|YP_002877885.1| flagellar hook-associated protein FlgL [Vibrio cholerae MJ-1236]
gi|254286495|ref|ZP_04961452.1| flagellar hook-associated protein FlgL [Vibrio cholerae AM-19226]
gi|254849319|ref|ZP_05238669.1| flagellar hook-associated protein FlgL [Vibrio cholerae MO10]
gi|255747111|ref|ZP_05421056.1| flagellar hook-associated protein FlgL [Vibrio cholera CIRS 101]
gi|262161345|ref|ZP_06030455.1| flagellar hook-associated protein FlgL [Vibrio cholerae INDRE 91/1]
gi|262167784|ref|ZP_06035486.1| flagellar hook-associated protein FlgL [Vibrio cholerae RC27]
gi|262191682|ref|ZP_06049858.1| flagellar hook-associated protein FlgL [Vibrio cholerae CT 5369-93]
gi|298500432|ref|ZP_07010237.1| flagellar hook-associated protein 3 [Vibrio cholerae MAK 757]
gi|9656745|gb|AAF95335.1| flagellar hook-associated protein FlgL [Vibrio cholerae O1 biovar
El Tor str. N16961]
gi|121631017|gb|EAX63396.1| flagellar hook-associated protein FlgL [Vibrio cholerae V52]
gi|124115827|gb|EAY34647.1| flagellar hook-associated protein FlgL [Vibrio cholerae 1587]
gi|126512333|gb|EAZ74927.1| flagellar hook-associated protein FlgL [Vibrio cholerae NCTC 8457]
gi|126521651|gb|EAZ78874.1| flagellar hook-associated protein FlgL [Vibrio cholerae B33]
gi|146316165|gb|ABQ20704.1| flagellar hook-associated protein FlgL [Vibrio cholerae O395]
gi|148875168|gb|EDL73303.1| flagellar hook-associated protein FlgL [Vibrio cholerae 623-39]
gi|150423444|gb|EDN15388.1| flagellar hook-associated protein FlgL [Vibrio cholerae AM-19226]
gi|227010202|gb|ACP06414.1| flagellar hook-associated protein FlgL [Vibrio cholerae M66-2]
gi|227014086|gb|ACP10296.1| flagellar hook-associated protein FlgL [Vibrio cholerae O395]
gi|229332579|gb|EEN98065.1| flagellar hook-associated protein FlgL [Vibrio cholerae 12129(1)]
gi|229341064|gb|EEO06069.1| flagellar hook-associated protein FlgL [Vibrio cholerae TM
11079-80]
gi|229343897|gb|EEO08872.1| flagellar hook-associated protein FlgL [Vibrio cholerae RC9]
gi|229349015|gb|EEO13972.1| flagellar hook-associated protein FlgL [Vibrio cholerae TMA 21]
gi|229352037|gb|EEO16978.1| flagellar hook-associated protein FlgL [Vibrio cholerae B33]
gi|229355238|gb|EEO20159.1| flagellar hook-associated protein FlgL [Vibrio cholerae BX 330286]
gi|229369892|gb|ACQ60315.1| flagellar hook-associated protein FlgL [Vibrio cholerae MJ-1236]
gi|254845024|gb|EET23438.1| flagellar hook-associated protein FlgL [Vibrio cholerae MO10]
gi|255735513|gb|EET90913.1| flagellar hook-associated protein FlgL [Vibrio cholera CIRS 101]
gi|262023849|gb|EEY42548.1| flagellar hook-associated protein FlgL [Vibrio cholerae RC27]
gi|262028656|gb|EEY47310.1| flagellar hook-associated protein FlgL [Vibrio cholerae INDRE 91/1]
gi|262032421|gb|EEY50983.1| flagellar hook-associated protein FlgL [Vibrio cholerae CT 5369-93]
gi|297541125|gb|EFH77179.1| flagellar hook-associated protein 3 [Vibrio cholerae MAK 757]
Length = 397
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/430 (10%), Positives = 102/430 (23%), Gaps = 54/430 (12%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N+ A+ +R + Q +++SG ++ A+DN Q + L D
Sbjct: 9 HNYQAV--QNDIRRQESKVFNNQAQLASGKKLLSASDNPLATHYIQNVGQQEEQLRQYLD 66
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
AI L ++++ + +S + + K + + + + LQ
Sbjct: 67 AIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQE------MA 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
++F ++ + G+ + K F RD+ G V
Sbjct: 121 NNFINLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYA--------------------- 159
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
D L G
Sbjct: 160 -------------------------GDDYQRKMKISNSLEIPFNNPGSKVFMEIPNPFGS 194
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
L + + + + + + +
Sbjct: 195 YEPNYALQEGSELLLERAVNLNPDDTASYRVTFVDMPEGKNGYQLERNGSVVQAGEFDAK 254
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + S + + + + ++V
Sbjct: 255 TGIQFEELNIQVKGQISKGDAIELTPRTTFSVFDTFRDAIRYAEGSVSDASNTAKLHQLV 314
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
T IG+ S + +QE+ + + ++ K D D A +
Sbjct: 315 EEFHTAFIHLNKTRTDIGARLSTLDIQEEQHEDFKISLAKSKSTFEDLDYAEAVIEFNEN 374
Query: 426 QTQQQLAVQA 435
+ + +A
Sbjct: 375 SRALEASQKA 384
>gi|68303927|gb|AAY89649.1| flagellin [uncultured Borrelia sp.]
gi|86451124|gb|AAY89651.1| flagellin [uncultured Borrelia sp.]
Length = 254
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 3/106 (2%)
Query: 45 AYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT- 103
A +A + S LS S + + + +++ V+ +K
Sbjct: 1 AGMGVAGKLNSQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYS 60
Query: 104 --DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
D SIQ EI QL ++ IA + +N + L + A+
Sbjct: 61 DSDRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSAAQNVKTAE 106
Score = 47.8 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 23/63 (36%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + +S I+ I+ T +G+ +R+ + + ++ ++
Sbjct: 192 SPINVTTAIDANMSLSKIEDAIRMVTDQRANLGAFQNRLESVKASTDYAIENLKASYAQI 251
Query: 411 VDA 413
DA
Sbjct: 252 KDA 254
>gi|50954395|ref|YP_061683.1| flagellar hook-associated protein 3 [Leifsonia xyli subsp. xyli
str. CTCB07]
gi|50950877|gb|AAT88578.1| flagellar hook-associated protein 3 [Leifsonia xyli subsp. xyli
str. CTCB07]
Length = 290
Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Query: 1 MTSILTNHSAM-SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
MT +T+ + + + + L+ ++ + + G++++ +D+ A + ++
Sbjct: 1 MTMRVTSTAQLLTTQRNLQAAKASMNDLYQEGTRGVKIAKPSDDPAGVANLLTVRKQLSQ 60
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQL 119
+ + + G + + ++ + DV+S I++ + GT S + Q I + QL
Sbjct: 61 NAQHTSNVDDGIGWMKTVDSALTGSADVISKIRDLVVQAANTGTSSPANQDSIVKSIEQL 120
Query: 120 RD 121
+
Sbjct: 121 KQ 122
Score = 49.7 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 28/219 (12%), Positives = 53/219 (24%), Gaps = 5/219 (2%)
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
T + +A V A + + S KS
Sbjct: 65 TSNVDDGIGWMKTVDSALTGSADVISKIRDLVVQAANTGTSSPANQDSIVKSIEQLKQNL 124
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
+ S S S + G
Sbjct: 125 LALANTQYLGRSVFAGTSDADTAFDVKSYAFNGTPGAEVSRRVSPSATIPVSADGAAVFG 184
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
++ + ++ ID+ + + A IG+ +++ +
Sbjct: 185 TGSGSVFSLIDGIATKIAADRNVGSELAAIDSALNTISGAQAAIGTNFAQLQ-----LGT 239
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+E+ R+ DAD A RL+A Q Q A+ +
Sbjct: 240 DATTLEEARSRIEDADPADVVLRLNAQQVSYQTALAVAA 278
>gi|152965587|ref|YP_001361371.1| flagellar hook-associated protein 3 [Kineococcus radiotolerans
SRS30216]
gi|151360104|gb|ABS03107.1| flagellar hook-associated protein 3 [Kineococcus radiotolerans
SRS30216]
Length = 302
Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 17/151 (11%), Positives = 48/151 (31%), Gaps = 3/151 (1%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A +A L++ + +Q++++SG + ++++ + A + + +
Sbjct: 11 ATNALTNLQNTQTRMAKLQEQITSGNSLPKGSEDSVRAAAALRLNDQIAVNTENGRNLDE 70
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLRDIARGS 126
+ + + + + ++ D K+I +EIT L+ + A
Sbjct: 71 ARAWMVTQEPALESTTKALQKVRELTVRASNGTFDATARKAIAAEITALKETILGDANTQ 130
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157
+ T G+
Sbjct: 131 YQGRAVFAGTSAGTVAYDATTYASNDDTNTT 161
Score = 45.1 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 33/119 (27%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ + + +S ID +I AT A
Sbjct: 172 TVSPGVHMQVNISGNSVYGSGNDSLFAELDTLAQKITDGDPTAAASLSTIDGRITKATNA 231
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
IG+ ++++ E+ +E + + D A + Q A+Q +
Sbjct: 232 MATIGARTNQLDHAEEVNANQLAYLEAQLNDVQGVDPAKAYVEFTQQNVAYQAALQVTA 290
>gi|229524185|ref|ZP_04413590.1| flagellar hook-associated protein FlgL [Vibrio cholerae bv.
albensis VL426]
gi|229337766|gb|EEO02783.1| flagellar hook-associated protein FlgL [Vibrio cholerae bv.
albensis VL426]
Length = 397
Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/430 (10%), Positives = 102/430 (23%), Gaps = 54/430 (12%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N+ A+ +R + Q +++SG ++ A+DN Q + L D
Sbjct: 9 HNYQAV--QNDIRRQESKVFNNQAQLASGKKLLSASDNPLATHYIQNVGQQEEQLRQYLD 66
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
AI L ++++ + +S + + K + + + + LQ
Sbjct: 67 AIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQE------MA 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
++F ++ + G+ + K F RD+ G V
Sbjct: 121 NNFINLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYA--------------------- 159
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
D L G
Sbjct: 160 -------------------------GDDYQRKMKISNSLEIPFNNPGSKVFMEIPNPFGS 194
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
L + + + + + + +
Sbjct: 195 YEPNYALQEGSELLLERAVNLNPDDTASYRVTFVDMPEGKNGYQLERNGSVVQAGEFDAK 254
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + S + + + + ++V
Sbjct: 255 TGIQFEELNIQVKGQISKGDAIELTPRTTFSVFDTFRDAIRYAEGSVSDASNTAKLHQLV 314
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
T IG+ S + +QE+ + + ++ K D D A +
Sbjct: 315 EEFHTAFIHLNKTRTDIGARLSTLDIQEEQHEDFKISLAKSKSTFEDLDYAEAVIEFNEN 374
Query: 426 QTQQQLAVQA 435
+ + +A
Sbjct: 375 SRALEASQKA 384
>gi|255654321|ref|ZP_05399730.1| flagellar hook-associated protein [Clostridium difficile QCD-23m63]
gi|296452610|ref|ZP_06894304.1| flagellar hook-associated protein 3 [Clostridium difficile NAP08]
gi|296880978|ref|ZP_06904924.1| flagellar hook-associated protein 3 [Clostridium difficile NAP07]
gi|296258571|gb|EFH05472.1| flagellar hook-associated protein 3 [Clostridium difficile NAP08]
gi|296427999|gb|EFH13900.1| flagellar hook-associated protein 3 [Clostridium difficile NAP07]
Length = 310
Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/159 (11%), Positives = 54/159 (33%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + S L+D L+ V +V++ ++ +DN KS+ +
Sbjct: 3 VSTGMMSSSYLNSLQDNLQRLDKVNRQVNTTKEINKLSDNPYKAIKILNSKSEIKTMEIY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + ++ + + ++S IK + A + +++ + ++++IA
Sbjct: 63 VENCKDTGNWLETTDTALDQLGKLLSDIKKTLVASGDGAYSDDELKTLSNETNEKIKEIA 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
+ E ++ + V +
Sbjct: 123 NALNATHEGKYIFSGSNTGIPPVECVDNADGSVSLKFNS 161
>gi|86451120|gb|AAY89652.1| flagellin [uncultured Borrelia sp.]
Length = 254
Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 3/106 (2%)
Query: 45 AYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT- 103
A +A + S LS S + + + +++ V+ +K
Sbjct: 1 AGMGVAGKLNSQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYS 60
Query: 104 --DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
D SIQ EI QL ++ IA + +N + L + A+
Sbjct: 61 DSDRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSAAQNVKTAE 106
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 23/63 (36%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + +S I+ I+ T +G+ +R+ + + ++ ++
Sbjct: 192 SPINVTTAIDANMSLSKIEDAIRMITDQRANLGAFQNRLESVKASTDYAIENLKASYAQI 251
Query: 411 VDA 413
DA
Sbjct: 252 KDA 254
>gi|23092322|gb|AAN08647.1| FlgL [Aeromonas hydrophila]
Length = 402
Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/381 (10%), Positives = 97/381 (25%), Gaps = 4/381 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN L + N L +++ SG + + ++ + S + +
Sbjct: 3 ITTNMVYNRNISSLNNANERLSTAYEQLQSGDKFKTSGEDPSGMSQKMALTKEIDLFKQY 62
Query: 64 SDAIGLGSSKV---DIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
L + + + ++ A+ T+ K D K+I SE+ LQ Q+
Sbjct: 63 GVNGSLLENSLGHEETVLTALNTAMTSAQTLIQKANDSAVGSDDRKAIASELEGLQKQMF 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY-YLDPETVLLDS 179
D+ + GE + + + + + D G+ I + +
Sbjct: 123 DLMNSKNSQGEFIFGGNQSKTQPFVQDASGNYLFQGDTGQRNIQVSPTVQIAANDSGFNL 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
R + I+V + D + TT+
Sbjct: 183 FEIVPTRRTSSAGSANIQVGVADQGNFDSFYRNNYDPALASNQYTVTTAAGAPDTYEIRD 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + + N+ + + ++
Sbjct: 243 GGGALLQSGDYVAGNKIPFNGLELTLDLPAGGAAQNFVLDSPQNNNILDGMSDFITALRD 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
+ KV + ++ +D + V + + +
Sbjct: 303 PNISAHDFQVKVADATSHMKNARLNVDQGLGEIGGRMNSLEQVLGSNEGLSTLNHQARAK 362
Query: 360 AMEEMVSFIDTQIKCATAAAG 380
E + + + AA
Sbjct: 363 VSEADLYEVIAALSKEDAALS 383
>gi|78485843|ref|YP_391768.1| flagellin-like [Thiomicrospira crunogena XCL-2]
gi|78364129|gb|ABB42094.1| Flagellin [Thiomicrospira crunogena XCL-2]
Length = 264
Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/254 (11%), Positives = 71/254 (27%), Gaps = 3/254 (1%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
+++A+ +L V ++SG R++++AD+A+ +I + + +
Sbjct: 5 SLNATNASSPYMNDLFKVNQSLTSGSRINNSADDASGQAIVTSLTTKIKDQDIGVQNANV 64
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGS 126
G + + A + + + + E Q + A +
Sbjct: 65 GINLLQTADGASNSITQQLQRLSELSLQAQNGTYSDAQRAMLDQEFQQGLKSINQFAEST 124
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
SFN L D + ++ + D + + T + ++
Sbjct: 125 SFNDIKLLNADTPTVDIALGPDNASTLQLPDLTVANLGLTGTDISTSTNAEAVQSKISDV 184
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
GL+ + Q + S + + Q A
Sbjct: 185 LGLISDSRAQLGSQQNGLVSAANNLMNQNVNSQSTRSQINDTDYAKAVTDQARQQVLNNA 244
Query: 247 TIPVPLPAAPAAPN 260
++ + N
Sbjct: 245 SVAMLAQRNQNYGN 258
Score = 67.5 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 21/170 (12%), Positives = 43/170 (25%)
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
+ G RA N + T P +
Sbjct: 94 QNGTYSDAQRAMLDQEFQQGLKSINQFAESTSFNDIKLLNADTPTVDIALGPDNASTLQL 153
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
+ E + S I + + + ++GS + + + +
Sbjct: 154 PDLTVANLGLTGTDISTSTNAEAVQSKISDVLGLISDSRAQLGSQQNGLVSAANNLMNQN 213
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ ++ D D A T + Q +V L+ N + +L L
Sbjct: 214 VNSQSTRSQINDTDYAKAVTDQARQQVLNNASVAMLAQRNQNYGNVLPLL 263
>gi|328948263|ref|YP_004365600.1| flagellar hook-associated protein 3 [Treponema succinifaciens DSM
2489]
gi|328448587|gb|AEB14303.1| flagellar hook-associated protein 3 [Treponema succinifaciens DSM
2489]
Length = 415
Score = 68.2 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/437 (11%), Positives = 119/437 (27%), Gaps = 40/437 (9%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I + + +LR N + ++ + R+ D+ +S G +
Sbjct: 1 MHRISSQFNNTDTQYQLRKQEVNQAIKNRQIGTQSRIGSLRDDPIAAGHLVRYQSYLGRV 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQS 117
+ + ++++ + +++ + +M ++ G G D K++ E+ +L
Sbjct: 61 NQFEKNAQTLADQMNVREGYINQNLQIMHRVRELAITGANGTYTGDDLKNMAVEVNELLK 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
++ A +G A + + + ++ V
Sbjct: 121 EMIQNANAVGPDGNTLFAGTRTKGAAFDVVMGNIPGSDEALIEKVNYKGNNGINKIEVDE 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
++ T A +
Sbjct: 181 NAYLQIDN-------------------------------------SGTKTFWAEPQHLIG 203
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
D A + A SG + + ++ + D + + ++
Sbjct: 204 QRDLTSWQALEDSVINIDGADITIKSGDNVYAVAAKINNSGIAVKASIDPVSQGLSLSTT 263
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
S + ++ S + SG S+ I + ++
Sbjct: 264 DSHQVWMEDKTGSALADMGMIEDSSQFPPYNVNTSAVKVSGGSLFDAVIALRDSMLKGDQ 323
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ +D I T K GS R + K + V + V R D D+
Sbjct: 324 ESIGSRVIGTLDYGINNLTTRLAKSGSDYERAMNNVERSKTNKVNVSQLVSREGDIDLTE 383
Query: 418 ESTRLSALQTQQQLAVQ 434
T L ++ Q +
Sbjct: 384 AITDLKMMEYVNQATMS 400
>gi|291288371|ref|YP_003505187.1| flagellin domain protein [Denitrovibrio acetiphilus DSM 12809]
gi|290885531|gb|ADD69231.1| flagellin domain protein [Denitrovibrio acetiphilus DSM 12809]
Length = 1284
Score = 68.2 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/377 (12%), Positives = 105/377 (27%), Gaps = 9/377 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N M + L ++V++G + + D+ + A M+ +
Sbjct: 3 ITYNFMTMKYLHGVNSSLNTLVRSSEQVTAGRNLLNPEDDPTNYLTAFNMQRTIDDATQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIK-NKITAGVERGTD---SKSIQSEITQLQSQL 119
+ + + + A ++S K AG D K++ E+ + +L
Sbjct: 63 NRNANNALIWLKNEDSILQTASSILSRAKDELAVAGKNDSQDADSRKALAGEVMNIYEEL 122
Query: 120 RDIARG-----SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
D+A F G S + V + + +
Sbjct: 123 LDLANSKYLDRYIFGGYETEEAPFTSGDRQVTSVVSSMDDGEAFSSRLYSDMPDLAKGSY 182
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ + G R ++D N+K + D + + F+
Sbjct: 183 TVKATVVGGVVRVTMMDANNKQVLLDSNGSDESTENGNLTTDTLVTGFQAGQVISTGRGV 242
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
+ D ++ + L P G G+ + + + + + T +
Sbjct: 243 SIKLPDDMGEGDSLTMSLYYTPGDDVEYVGDDGAINSKIGDNQNVQINISGEDIFMETFR 302
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA 354
+ + P +N +D + + +GY + T + N D
Sbjct: 303 TILGTMPNTSNGLTISETTKFSKIDGANVSSSDSISFTGTDHNGYRIGTARVASPKNVDL 362
Query: 355 YNEKLAMEEMVSFIDTQ 371
E+ I+
Sbjct: 363 DMTNTTAEQRTLSINYA 379
Score = 39.7 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 40/373 (10%), Positives = 80/373 (21%), Gaps = 26/373 (6%)
Query: 92 KNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSST---ASIAKS 148
T + +QL + + + T T S+
Sbjct: 902 NELTVHYNNTETAFMFSGVDSKSSGTQLPSLELKEDSVLDVYYETGGAWGTATPISVTIP 961
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+D L + S + G + NH + ++ D
Sbjct: 962 AGIYADNTALLAEINNQLDTALVADGFAAGSMSAVLGDDGTIKINHDATFDDIIVSGDDN 1021
Query: 209 SVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGS 268
+++ + T L N
Sbjct: 1022 GELGFYSLVTSNTIETKTNPTLDLSEKNIGERTLTFYTDDGSGNYTETNIVVDAENYQSL 1081
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ G + T + S + V + D
Sbjct: 1082 DDLVDNINEKLTDAGLAPDVSCGTMNETQLSFSFGGAYSSMHVSGDYEGTLGIEKGGDIA 1141
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM--------------------VSFI 368
K D + T + + + + +
Sbjct: 1142 KMKVTGSDGSLISSYIIDTANEKYYVADGVYHHYDAGTLAATDSYTVGVGSGIDYEMKVM 1201
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA---DMASESTRLSAL 425
+T A +G+ +R F + + A EK + D A+ +T +
Sbjct: 1202 ETAESQIHTALTIVGNRENRAESAVTFNESLITASEKLKAEYTGSTTMDQAAAATNYTVA 1261
Query: 426 QTQQQLAVQALSI 438
QT Q A+ A +
Sbjct: 1262 QTVYQSALAATAQ 1274
>gi|330892702|gb|EGH25363.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
mori str. 301020]
Length = 211
Score = 68.2 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 68/202 (33%), Gaps = 3/202 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + + N+ + VSSG++++ A+D+ + + N L+
Sbjct: 3 ISTTQFYESTNTNYQRTYSNVLKTSEEVSSGIKLNTASDDPVGAARVLQLAQQNSMLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ IG ++ + ++ ++ +D M T + I + +D + +E+ Q QSQL
Sbjct: 63 ASNIGTINTNIVNSETALTSIVDTMQTAREVIVSAGNGAYTDSDRLAKAAELKQYQSQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ NG+ S+ + D V + D + P +
Sbjct: 123 GLMNSQDSNGQYIFAGSKSSAPPYAQNADGTYSYSGDQTSVNLAIGDGLVLPSNTTGYEA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQV 202
+
Sbjct: 183 FEQAVNTTRTSSTLLSPATDDG 204
>gi|86451122|gb|AAY89650.1| flagellin [uncultured Borrelia sp.]
Length = 254
Score = 68.2 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 3/106 (2%)
Query: 45 AYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT- 103
A +A + S LS S + + + +++ V+ +K
Sbjct: 1 AGMGVAGKLNSQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYS 60
Query: 104 --DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
D SIQ EI QL ++ IA + +N + L + A+
Sbjct: 61 DSDRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSAAQNVKTAE 106
Score = 45.5 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 23/63 (36%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + +S I+ I+ T +G+ +R+ + + ++ ++
Sbjct: 192 SPINVTTAIDANMSLSKIEDAIRMXTDQRANLGAFQNRLESVKASTDYAIENLKASYAQI 251
Query: 411 VDA 413
DA
Sbjct: 252 KDA 254
>gi|75675297|ref|YP_317718.1| hypothetical protein Nwi_1104 [Nitrobacter winogradskyi Nb-255]
gi|74420167|gb|ABA04366.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 523
Score = 68.2 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/260 (14%), Positives = 79/260 (30%)
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
+ I + + A + + N+
Sbjct: 264 KTLTIGATDGGTATSITFGTGTGQINTLDQLNTALAANNLTASINSAGAITFTTTNDHAS 323
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ T+ + + + +A N+ + I
Sbjct: 324 ATIGAFGGDATTDPNTFGAMTASAPVEDANAQNTRATLIGQYNQVIDQIRTTAQDASFNG 383
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
N + ++ K + L ++ A + + + ++ ++T
Sbjct: 384 INLLNGDQLKLVFNETGKSTLTIQGVTFDPAGLGLSSLAKGTDFLDNASTNAVLDSLNTA 443
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ A GS S + +++DF K + + ++ G L AD E+ AL T+Q +
Sbjct: 444 SSTLRSQASTFGSNLSIVQIRQDFSKNLINVLQTGSANLTLADTNEEAANSQALATRQSI 503
Query: 432 AVQALSIVNNSTARILSLFR 451
AV AL++ N S +L L R
Sbjct: 504 AVSALALANQSQQSVLQLLR 523
Score = 63.6 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 43/379 (11%), Positives = 101/379 (26%), Gaps = 3/379 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ + S L+ L Q R+++G +V+ A DN + A + + +
Sbjct: 1 MSDIVLSASVRQNLLSLQSTAELLSTTQTRLATGKKVNSALDNPTNFFTAAGLDARASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + D+IG G + A G++ ++ T K+ ++ + + T
Sbjct: 61 NNLLDSIGNGVQVLQAANTGITSLQKLVDTAKSIANQALQATSGYSTKSQATTAAI---T 117
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + + + S+ + L + + D+
Sbjct: 118 GATADNLLGPGGAPTDAAATPGSVVNNSLTVPAPITAATTLSGGVNTDSLATDFIAGDTI 177
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ DV S T T + A++ T
Sbjct: 178 VVNGTTINFVASGATGNDLNITDTVGDVLARIDSITGGTSTISGGAITLHTGTASDLTIS 237
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ A + + + T + + T + + +
Sbjct: 238 GSGLAKLGLTAGTTARTPGAPAALDGKTLTIGATDGGTATSITFGTGTGQINTLDQLNTA 297
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
N T + T + + + +T A + N +
Sbjct: 298 LAANNLTASINSAGAITFTTTNDHASATIGAFGGDATTDPNTFGAMTASAPVEDANAQNT 357
Query: 361 MEEMVSFIDTQIKCATAAA 379
++ + I A
Sbjct: 358 RATLIGQYNQVIDQIRTTA 376
>gi|311992307|gb|ADQ26727.1| flagellar hook-filament junction protein at filament [Aeromonas
hydrophila]
Length = 401
Score = 68.2 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/387 (10%), Positives = 99/387 (25%), Gaps = 7/387 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN L N L +++ +G + A ++ + S + +
Sbjct: 2 ITTNMVYDRNISSLNGANERLSTAYEQLMTGNKFKTAGEDPSGMSQKLALTKEIDLFKQY 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
L + + + ++ M++ + I D K+I SE+ LQ Q+
Sbjct: 62 GVNGSLLENSLGHEETVLTALNTAMTSAQTLIQKSNNSAMDLEERKAIASELEGLQKQMF 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY-YLDPETVLLDS 179
D+ + GE + + I + + D G+ I + +
Sbjct: 122 DLMNSKNSQGEYIFGGNQSKTQPFIKDASGNYVFQGDTGQRNIQVSPTVQIPANDSGFNL 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
R + I+V + D + + T
Sbjct: 182 FEIVPTRRTSSAGSANIQVGVADQGNFDSFYRNNYDSSLASNQYTVNTIAGTPDTYEIRD 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + S + N+ + + ++
Sbjct: 242 GGGALLQSGDYVAGNKIPFNGLELTLSLPAGGAAQNFVLDPPQNNNILDGMSDFITALRD 301
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
++ KV + ++ +D +G V + + +
Sbjct: 302 PNITPDTFQLKVADATAHMKNARQNMDQGLGEIGGRMNGLEQVMGSNEGLSTLNQQARAK 361
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSIS 386
E + + I + + +
Sbjct: 362 VSEADLYEV---IATLSKEDAALSATQ 385
>gi|254973893|ref|ZP_05270365.1| flagellar hook-associated protein [Clostridium difficile QCD-66c26]
gi|255091278|ref|ZP_05320756.1| flagellar hook-associated protein [Clostridium difficile CIP
107932]
gi|255312937|ref|ZP_05354520.1| flagellar hook-associated protein [Clostridium difficile QCD-76w55]
gi|255515696|ref|ZP_05383372.1| flagellar hook-associated protein [Clostridium difficile QCD-97b34]
gi|255648790|ref|ZP_05395692.1| flagellar hook-associated protein [Clostridium difficile QCD-37x79]
gi|260682010|ref|YP_003213295.1| flagellar hook-associated protein [Clostridium difficile CD196]
gi|260685608|ref|YP_003216741.1| flagellar hook-associated protein [Clostridium difficile R20291]
gi|306518907|ref|ZP_07405254.1| flagellar hook-associated protein [Clostridium difficile QCD-32g58]
gi|260208173|emb|CBA60495.1| flagellar hook-associated protein [Clostridium difficile CD196]
gi|260211624|emb|CBE01863.1| flagellar hook-associated protein [Clostridium difficile R20291]
Length = 310
Score = 68.2 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/175 (10%), Positives = 60/175 (34%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + + L+D L+ V +V++ ++ +DN KS+ +
Sbjct: 3 VSTGMMSSNYLNSLQDNLQRLDKVNRQVNTTKEINKLSDNPYKAIKILNSKSEIKTMETY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + ++ + + ++S IK + A + +++ + ++++IA
Sbjct: 63 VENCKDTGNWLETTDTALDQLGKLLSDIKKTLVASGDGAYSDDELKTLSNETNEKMKEIA 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ E ++ + + + ++ D ++ +
Sbjct: 123 NALNATHEGKYIFSGSNTGVPPVECIDNADGSVSLKFNSSLNLNKLNDSLSMDIA 177
>gi|4760481|dbj|BAA77302.1| flagellin [Pseudomonas fluorescens]
Length = 176
Score = 68.2 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 3/114 (2%)
Query: 44 AAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE--- 100
AA IA M S L G S A+ M + D++ ++ +
Sbjct: 1 AAGLGIATRMTSQINGLGQAVKNANDGISIAQTAEGAMQASTDILQKMRTLALSSATGSL 60
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
D KS E L S+L I++ ++F G+ L G+ + + +
Sbjct: 61 STDDRKSNNDEYQALTSELTRISQTTTFGGQKLLDGSYGTKAIQVGANANETIN 114
>gi|146343758|ref|YP_001208806.1| hypothetical protein BRADO7005 [Bradyrhizobium sp. ORS278]
gi|146196564|emb|CAL80591.1| conserved hypothetical protein; putative flagellin C-ter domain
[Bradyrhizobium sp. ORS278]
Length = 523
Score = 68.2 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 71/517 (13%), Positives = 137/517 (26%), Gaps = 68/517 (13%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ + S L+ L Q+ +S+G +V+ A DN + AQ + + +
Sbjct: 9 MSGIVLSASVRQNLLSLQSTAQLLATTQNNLSTGKKVNSALDNPTNFFTAQGLDNRASDI 68
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQS--- 117
S + D IG G + A G++ ++ + K+ ++ + S + S
Sbjct: 69 SNLLDGIGNGVQVLQAANTGITSLQKLVDSAKSIANQVLQSAVGYSTKSSVTSAALSGAT 128
Query: 118 -----------------QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
Q + T SS G + +
Sbjct: 129 ATDLLGSSSTAVTGSVVQNDATTSSAITGSTKLSGTSGSSSNDLATGITSGETLVVNGTT 188
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
T + D+ ++ + + SG+ T
Sbjct: 189 FTFVTGTSSSGTNIGIGDTVSNLLSTIQTATGVTGSVSAGAITLTPPAAGLTLSGSSGTL 248
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ G L T G + + + + + + +
Sbjct: 249 AKLGLSAVGDGLSGQTLTVGATAGGTATSITFGLGTGQVKSLNDLNAKLAANNLQATVDS 308
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
G I ++ G T + ++ N + + +
Sbjct: 309 STGKITITTTNDAASATIGTIGGTAAASSQSFNGLTAAAPVADSTAQTQRANLVSQYNNV 368
Query: 341 MVTLNITRHANTD------AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ +N T ++ + I T + +G S + D
Sbjct: 369 LAQINTTAADSSFNGINLLNGDTLKLTFNETGKSTLSITGVTFNSAGLG--LSTLTSGTD 426
Query: 395 FIKLMRDA-----VEKGVGRLVD-----------------------------------AD 414
F+ + L D AD
Sbjct: 427 FLDNNSANKVIKVLNTASSTLRDEASTLGSNLSVVQVRQDFNKNLINVLQTGSSNLTLAD 486
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV ALS+ N S A +L L R
Sbjct: 487 TNEEAANSQALSTRQSIAVSALSLANQSQASVLQLLR 523
>gi|297580836|ref|ZP_06942761.1| flagellar hook-associated protein FlgL [Vibrio cholerae RC385]
gi|297534662|gb|EFH73498.1| flagellar hook-associated protein FlgL [Vibrio cholerae RC385]
Length = 397
Score = 68.2 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/430 (10%), Positives = 103/430 (23%), Gaps = 54/430 (12%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N+ A+ +R + Q +++SG ++ A+DN Q + L D
Sbjct: 9 HNYQAV--QNDIRRQESKVFNNQAQLASGKKLLSASDNPLATHYIQNVGQQEEQLRQYLD 66
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
AI L ++++ + +S + + K + + + + LQ
Sbjct: 67 AIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQE------MA 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
++F ++ + G+ + K F RD+ G V
Sbjct: 121 NNFINLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYA--------------------- 159
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
D L G
Sbjct: 160 -------------------------GDDYQRKMKISNSLEIPFNNPGSKVFMEIPNPFGS 194
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
L + S + + + + + +
Sbjct: 195 YEPNYALQEGSELLLERAVNLNSDDTASYRVTFVDMPEGKNGYQLERNGSVVQAGEFDAK 254
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + S + + + + ++V
Sbjct: 255 TGIQFEELNIQVKGQISKGDTIELTPRTTFSVFDTFRDAIRYAEGSVSDASNTAKLHQLV 314
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
T IG+ S + +QE+ + + ++ K D D A +
Sbjct: 315 EEFHTAFIHLNKTRTDIGARLSTLDIQEEQHEDFKISLAKSKSTFEDLDYAEAVIEFNEN 374
Query: 426 QTQQQLAVQA 435
+ + +A
Sbjct: 375 SRALEASQKA 384
>gi|330972422|gb|EGH72488.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
aceris str. M302273PT]
Length = 530
Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/344 (11%), Positives = 93/344 (27%), Gaps = 3/344 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + + NL + VSSG++++ A D+ + + N L+
Sbjct: 3 ISTTQFFESTNTNYQRNYSNLNKTSEEVSSGIKLNTAGDDPVGAARVLQLTQQNSMLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
IG ++ + ++ ID M + +I + +D + S + Q QSQ+
Sbjct: 63 ETNIGTINTNAVTTETTLTSIIDTMQAAREQIVSAGSGAFTDSDRLAKASALKQYQSQIL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ NG+ S+ + + D V + D + +
Sbjct: 123 GLMNSQDPNGQYIFSGSKASTPPYSLNADGSYSYKGDQTSVNLAVGDGLVMASNTSGFEA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + ++ T + + +L
Sbjct: 183 FEQSVNTTRTSATLLSPATDDGKIGLSSGLVTSTPTYNASYQAGEPYTLTFLSGTQFKIT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A G + + + + + + A + S
Sbjct: 243 DASGTDVSSDTSSGGKFSHGSFDAQTFTFRGVEMTLNVNLPAADRVSDATADAALANRSY 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTL 344
+ + T + + + + + +
Sbjct: 303 QLASTPDSVSTSRSAGNTSTATVSSSVVGNTAADRTAFNNTFPT 346
Score = 44.3 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 59/466 (12%), Positives = 121/466 (25%), Gaps = 28/466 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRV-SSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I TN A++ L I ++ ++++ S+G +D A S + +S L
Sbjct: 68 TINTN--AVTTETTLTSIIDTMQAAREQIVSAGSGAFTDSDRLAKASALKQYQSQILGLM 125
Query: 62 AVSDAIGLGS---SKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQ 118
D G SK ++ + + + Q
Sbjct: 126 NSQDPNGQYIFSGSKASTPPYSLNADGSYSYKGDQTSVNLAVGDGLVMASNTSGFEAFEQ 185
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ + TD G S + T+ + + + D
Sbjct: 186 --SVNTTRTSATLLSPATDDGKIGLSSGLVTSTPTYNASYQAGEPYTLTFLSGTQFKITD 243
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+S + + T+ A L +
Sbjct: 244 ASGTDVSSDTSSGGKFSHGSFDAQTFTFRGVEMTLNVNLPAADRVSDATADAALANRSYQ 303
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ A ++S + + A + T+ G + T +
Sbjct: 304 LASTPDSVSTSRSAGNTSTATVSSSVVGNTAADRTAFNNTFPTDGAILKFTSPTDYDLYA 363
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY--- 355
+ ++ V+ T + + T NT
Sbjct: 364 APLTSSSKPVSSGTMTGSTANASGVNFNISGTPAAGDQFIVESGTHQTENILNTLTAAIK 423
Query: 356 --------------NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
N A+ + + + I+ A+ A G+ Q L++
Sbjct: 424 ALSTPTDGNLVASQNMTAALNSALGNMSSAIEQASTARSNGGARQLAATAQGTTNDLLKG 483
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQ---ALSIVNNSTA 444
G V+AD+ +TRL+ +T + Q LS +N +
Sbjct: 484 NNTTEQGTYVNADIVEATTRLTLQKTMLDASQQVFTMLSKLNLFSQ 529
>gi|323498413|ref|ZP_08103409.1| flagellar hook-associated protein FlgL [Vibrio sinaloensis DSM
21326]
gi|323316486|gb|EGA69501.1| flagellar hook-associated protein FlgL [Vibrio sinaloensis DSM
21326]
Length = 397
Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 48/422 (11%), Positives = 109/422 (25%), Gaps = 52/422 (12%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
LR + Q +++SG ++ A+D+ Q + L SDAI L ++
Sbjct: 15 QNDLRRQESKVHHNQAQLASGKKLMKASDDPLATHYIQNIGQQKEQLRQYSDAIVLTRNR 74
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
++ + +S A + K + + + + ++ +I+ F
Sbjct: 75 LEHHEVIISNAEEFADEAKRTVMEMINGALSPEDR----FAKRREIEEISNN--FLNLVN 128
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
++ + G+ + K F R D++
Sbjct: 129 VQDESGNYIFAGTKPKNQPFFR-----------------------------------DKD 153
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
+ + I+ KL + +D + +
Sbjct: 154 ADVVYAGDDYQRKMKISNSLEMPINDPGSKLFMEIDNPFGDFSPKYDLKEASELLLERAI 213
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+T + P R G+ I +
Sbjct: 214 NLNPDDQSTYKVTFVDMPEGKYGYQLERDGSVVQADTFDPSKGIKYEDVTIQVKGQITKG 273
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
++ + T S S+ + T + ++
Sbjct: 274 DAIELEPQRTYSIFETFKEAMALSEGSVSDSSNTAQLHQI----TQEFHAAFIHLNKA-- 327
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ S + +QE+ + + + K D D A+ + Q +
Sbjct: 328 -----RTDVGARLSTLDIQEEQHEDFKMTLAKSQSNFEDLDYAAAIIEFNENSRALQASQ 382
Query: 434 QA 435
QA
Sbjct: 383 QA 384
>gi|30721716|gb|AAP34189.1| FliC [Pseudomonas aeruginosa]
Length = 154
Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 29/101 (28%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T S + + + + V ID IK
Sbjct: 54 TSAVSGVVIADTGSTGVGTAAGVTPSATAFAKTNDTVAKIDISTAKGAQSAVLVIDEAIK 113
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
A +G++ +R + +K + + V GR+ D D
Sbjct: 114 QIDAQRADLGAVQNRFDNTINNLKNIGENVSVARGRIEDTD 154
>gi|13177575|gb|AAG61259.1| flagellin protein [Borrelia sp. LB-2001]
Length = 253
Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 3/106 (2%)
Query: 45 AYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT- 103
A +A + S LS S + + + +++ V+ +K
Sbjct: 1 AGMGVAGKLNSQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYS 60
Query: 104 --DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
D SIQ EI QL ++ IA + +N + L + A+
Sbjct: 61 DSDRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSAAQNVKTAE 106
Score = 47.8 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 14/131 (10%), Positives = 34/131 (25%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G W + + N A V N ++ +
Sbjct: 123 GTQASWTLRVHVGANQDEAIAVNIYAANVANLFNGEGAQAAPAQEGAQQEGVQAAPAPAA 182
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + +S I+ I+ T +G+ +R+ + +
Sbjct: 183 APVQGGVNSPINVTTAIDANMSLSKIEDAIRMVTDQRANLGAFQNRLESVKASTDYAIEN 242
Query: 403 VEKGVGRLVDA 413
++ ++ DA
Sbjct: 243 LKASYAQIKDA 253
>gi|183179572|ref|ZP_02957783.1| flagellar hook-associated protein FlgL [Vibrio cholerae MZO-3]
gi|183012983|gb|EDT88283.1| flagellar hook-associated protein FlgL [Vibrio cholerae MZO-3]
Length = 397
Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/430 (10%), Positives = 102/430 (23%), Gaps = 54/430 (12%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N+ A+ +R + Q +++SG ++ A+DN Q + L D
Sbjct: 9 HNYQAV--QNDIRRQESKVFNNQAQLASGKKLLSASDNPLATHYIQNVGQQEEQLRQYLD 66
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
AI L ++++ + ++ + + K + + + + LQ
Sbjct: 67 AIVLVRNRLEHQEVIIANTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQE------MA 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
++F ++ + G+ + K F RD+ G V
Sbjct: 121 NNFINLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYA--------------------- 159
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
D L G
Sbjct: 160 -------------------------GDDYQRKMKISNSLEIPFNNPGSKVFMEIPNPFGS 194
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
L + + + + + + +
Sbjct: 195 YEPNYALQEGSELLLERAVNLNPDDTASYRVTFVDMPEGKNGYQLERNGSVVQAGEFDAK 254
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + S + + + + ++V
Sbjct: 255 TGIQFEELNIQVKGQISKGDAIELTPRTTFSVFDTFRDAIRYAEGSVSDASNTAKLHQLV 314
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
T IG+ S + +QE+ + + ++ K D D A +
Sbjct: 315 EEFHTAFIHLNKTRTDIGARLSTLDIQEEQHEDFKISLAKSKSTFEDLDYAEAVIEFNEN 374
Query: 426 QTQQQLAVQA 435
+ + +A
Sbjct: 375 SRALEASQKA 384
>gi|302185575|ref|ZP_07262248.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
syringae 642]
Length = 530
Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/254 (13%), Positives = 70/254 (27%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + NL + VSSG++++ A+D+ S + N L+
Sbjct: 3 ISTTQFYEATNANYQRNYSNLNKTSEEVSSGIKLNTASDDPVGASRVLQLTQQNSMLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
IG ++ V + ++ +D M + +I + ++ L+ I
Sbjct: 63 EANIGTINTNVVNTETALTSIVDTMQAAREEIVSASNGALTDSDRLAKAAALKQYQSQIL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ N GS ++ S G + + +
Sbjct: 123 GLMNSQDPNGQYIFAGSKASTPPYSQNADGSYSYKGDQTSVNLAVGNGLVMASNTTGFEA 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
E+ R V P + T L + T +
Sbjct: 183 FEQAVNATRTSSTLVSPATDDGKIGLSGGLVTSTPTYNSNYQGGEPYTLTFLSGTQFKIT 242
Query: 244 GIATIPVPLPAAPA 257
V A+
Sbjct: 243 DATGTDVSSEASSG 256
Score = 37.4 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 50/464 (10%), Positives = 121/464 (26%), Gaps = 24/464 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLR-VSDAADNAAYWSIAQIMKSDNGAL- 60
+I TN ++ L I ++ ++ + S +D A + + +S L
Sbjct: 68 TINTNV--VNTETALTSIVDTMQAAREEIVSASNGALTDSDRLAKAAALKQYQSQILGLM 125
Query: 61 ------SAVSDAIGLGSS--KVDIAKAGM----SKAIDVMSTIKNKITAGVERGTDSKSI 108
A S+ A + ++ + A G ++
Sbjct: 126 NSQDPNGQYIFAGSKASTPPYSQNADGSYSYKGDQTSVNLAVGNGLVMASNTTGFEAFEQ 185
Query: 109 QSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
T+ S L A G + + S + + +G T
Sbjct: 186 AVNATRTSSTLVSPATDDGKIGLSGGLVTSTPTYNSNYQGGEPYTLTFLSGTQFKITDAT 245
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
D + + + + ++ + + +
Sbjct: 246 GTDVSSEASSGGKFSNGSFDAQTFTFRGVELTLNVNLTAADKATSATADAALANRTYQLA 305
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
+ + AT+ + AA T + ++ +
Sbjct: 306 STPDSVSTSRSAGNTSTATVSSSVVGNSAADRTAFNNTFPTDGAILKFTSPTDYELYAAP 365
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL-----DSRKDLPKEIDSGYSMVT 343
V +++K + + + + V + + +
Sbjct: 366 VTSSSKPVSSGTMSGSTANASGVNFNISGTPAAGDQFLVESGTHQTENILNTLTAAIKAL 425
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
+ +M + + + I+ A+ A G+ Q +++
Sbjct: 426 STPADGNLVASQKLSASMTSALGNMSSSIEQASTARSNGGARQLAATAQGTTNDMLKGNN 485
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLAVQ---ALSIVNNSTA 444
G V+AD+ +TRL+ +T + Q LS +N +
Sbjct: 486 TVEQGTYVNADIVEATTRLTLQKTMLDASQQVFTMLSKLNLFSQ 529
>gi|167013356|pdb|2ZBI|A Chain A, Crysatl Structure Of A Bacterial Cell-Surface Flagellin
gi|167013357|pdb|2ZBI|B Chain B, Crysatl Structure Of A Bacterial Cell-Surface Flagellin
Length = 292
Score = 67.8 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 52/147 (35%), Gaps = 3/147 (2%)
Query: 54 KSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQS 110
+ L+ G S A+ + + + + I+ TD ++Q+
Sbjct: 1 TAQIKGLTQAQRNANDGISLAQTAEGALGEISNNLQRIRELAVQASNGTNTQTDRDALQA 60
Query: 111 EITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL 170
E+TQLQS+++ +A +SFNG+ L I + + Q ++ L
Sbjct: 61 EVTQLQSEIQRVAEQTSFNGQKLLDGSFNGVQFQIGANAGETIGVSKIXNAQTASLGGSL 120
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIK 197
T +D++ + I
Sbjct: 121 TRTTSTIDATDLTKYDTAXAAGDLTIN 147
Score = 47.8 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 23/283 (8%), Positives = 62/283 (21%)
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G S A A+ +G + ++ D+
Sbjct: 3 QIKGLTQAQRNANDGISLAQTAEGALGEISNNLQRIRELAVQASNGTNTQTDRDALQAEV 62
Query: 185 ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKG 244
+ + + K +D S I + S +
Sbjct: 63 TQLQSEIQRVAEQTSFNGQKLLDGSFNGVQFQIGANAGETIGVSKIXNAQTASLGGSLTR 122
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
+ +G V + +
Sbjct: 123 TTSTIDATDLTKYDTAXAAGDLTINGVDVGKIDAASTAQERAAQLTEAINRVSSQTNVGA 182
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
+ T + + + + T T N+ + ++
Sbjct: 183 SYDKTTGQVTLTSNAAIAVAGAANDATVAGWANNATTGTATTTTGINSLTVSSFTNAQQT 242
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
++ ID +K A +G++ +R ++ + + +
Sbjct: 243 ITQIDNALKDINTARADLGAVQNRFTSTVANLQSXTENLSSAL 285
>gi|189426323|ref|YP_001953500.1| flagellar hook-associated protein 3 [Geobacter lovleyi SZ]
gi|189422582|gb|ACD96980.1| flagellar hook-associated protein 3 [Geobacter lovleyi SZ]
Length = 299
Score = 67.8 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 18/200 (9%), Positives = 66/200 (33%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N ++ ++ L++ L+ + ++++SG + +D+ A
Sbjct: 3 ITPNITSQNSLYNLQNSRTLLDQINEKIASGKNYNRPSDDPIAARQLVNFADQLRAGEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
S + ++ + + + + +S IK + + + ++QL++ + +
Sbjct: 63 SSNMTKANTWLKVTETALEGMSATLSEIKKLTSTLTNGTDITAVRDNAVSQLKTYKQQLI 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ ++ + ++ + D + +++ T T
Sbjct: 123 DYGNTQLDDRYVFAGTDNASTAPFNGSTFSGNDTSIDIELNTSSTQAINITGGRVLKGTN 182
Query: 184 TERYGLLDRNHKIKVEPQVL 203
Y + +++ +
Sbjct: 183 GVPYQYGSTDILTELDNLIT 202
>gi|146335608|gb|ABQ23407.1| FlgL [Pseudomonas syringae pv. averrhoi]
Length = 530
Score = 67.8 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/361 (10%), Positives = 96/361 (26%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + + N+ + VSSG++++ A+D+ + + N L+
Sbjct: 3 ISTTQFYESTNTNYQRTYSNVLKTSEEVSSGIKLNTASDDPVGAARVLQLAQHNSMLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ IG ++ + ++ ++ +D M T + I + ++ +L+ +
Sbjct: 63 ASNIGTINTNIVNSETALTSIVDTMQTAREVIVSAGNGAYTDSDRLAKAAELKQYQSQLL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ N GS +++ + NG + + +
Sbjct: 123 GLMNSQDSNGQYIFAGSKSSAPPYAQNADGTYSYNGDQTSVNLAIGDGLALPSNTTGYEA 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
E+ R + P + S + + T +
Sbjct: 183 FEQAANTTRTSSTLLSPATDDGKVGLTGGQVTSTSAYNSGYQAGEPYTMTFLSGTQFKIT 242
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ V A+ A + + T ++ T + ++ Y
Sbjct: 243 DASGTDVTTDASTAGKFSYGSFADQTFTFRGVELTMNINLSAAESATPATAATALTNRSY 302
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
++ + S S + + A +
Sbjct: 303 ELASTPDTVSASRSPGNTSAATISSSAVGNTTADRTAFNNTFPPNGAILKFTSATAYDLY 362
Query: 364 M 364
Sbjct: 363 A 363
Score = 40.9 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 53/455 (11%), Positives = 120/455 (26%), Gaps = 21/455 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRV-SSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I TN +++ L I ++ ++ + S+G +D A + + +S L
Sbjct: 68 TINTNI--VNSETALTSIVDTMQTAREVIVSAGNGAYTDSDRLAKAAELKQYQSQLLGLM 125
Query: 62 AVSDAIGL---------GSSKVDIAKAGM----SKAIDVMSTIKNKITAGVERGTDSKSI 108
D+ G A + ++ G ++
Sbjct: 126 NSQDSNGQYIFAGSKSSAPPYAQNADGTYSYNGDQTSVNLAIGDGLALPSNTTGYEAFEQ 185
Query: 109 QSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
+ T+ S L A G + S+ S ++ + +G T
Sbjct: 186 AANTTRTSSTLLSPATDDGKVGLTGGQVTSTSAYNSGYQAGEPYTMTFLSGTQFKITDAS 245
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
D T + + + + + + + +
Sbjct: 246 GTDVTTDASTAGKFSYGSFADQTFTFRGVELTMNINLSAAESATPATAATALTNRSYELA 305
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
+ + ATI A T + + ++ +
Sbjct: 306 STPDTVSASRSPGNTSAATISSSAVGNTTADRTAFNNTFPPNGAILKFTSATAYDLYASP 365
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL-----DSRKDLPKEIDSGYSMVT 343
V +++K + + + + V T + + +
Sbjct: 366 VTSSSKPVSSGTLTGSTANASGVNFTVSGTPAAGDQFVVESGTHQTENILNTLTAAIKAL 425
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
T + A+ + I + I A+ A G+ Q L++
Sbjct: 426 STPTDGNLVASQKLDAALGSALGNIASSIDQASTARSAGGARQLAATAQGTTNDLLKGNN 485
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
G V+AD+ +TRL+ +T + Q
Sbjct: 486 TVEQGTYVNADIVEATTRLTLQKTMLDASQQVFVQ 520
>gi|330943215|gb|EGH45622.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
pisi str. 1704B]
Length = 465
Score = 67.8 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/344 (11%), Positives = 93/344 (27%), Gaps = 3/344 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + + NL + VSSG++++ A D+ + + N L+
Sbjct: 3 ISTTQFFESTNTNYQRNYSNLNKTSEEVSSGIKLNTAGDDPVGAARVLQLAQQNSMLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
IG ++ + ++ ID M + +I + +D + S + Q QSQ+
Sbjct: 63 ETNIGTINTNAVTTETTLTSIIDTMQAAREQIVSAGSGAFTDSDRLAKASALKQYQSQIL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ NG+ S+ + + D V + D + +
Sbjct: 123 GLMNSQDPNGQYIFSGSKASTPPYSLNADGSYSYKGDQTSVNLAVGDGLVMASNTTGFEA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + ++ T + + +L
Sbjct: 183 FEQSVNTTRTSATLLSPATDDGKIGLSSGLVTSTPTYNASYQGGEPYTLTFLSGTQFKIT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A G + + + + + + A + S
Sbjct: 243 DASGTDVSSDTSSGGKFSHGSFDAQTFTFRGVEMTLNVNLPAADRVSDATADAALANRSY 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTL 344
+ + T + + + + + +
Sbjct: 303 QLASTPDSVSTSRSAGNTSTATVSSSVVGNTAADRTAFNNTFPT 346
>gi|126697803|ref|YP_001086700.1| flagellar hook-associated protein [Clostridium difficile 630]
gi|115249240|emb|CAJ67053.1| Flagellar hook-associated protein FlgL (or HAP3) [Clostridium
difficile]
Length = 310
Score = 67.8 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 17/159 (10%), Positives = 53/159 (33%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + S L+D L+ V ++++ ++ +DN KS+ +
Sbjct: 3 VSTGMMSSSYLNSLQDNLQRLDKVNRQINTTKEINKLSDNPYKAIKILNSKSEIKTMETY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + ++ + + ++++ IK + + I++ ++++IA
Sbjct: 63 IENCKDTADWLETTDTSLDQLGNLLADIKKGLVSSGNGSYSDDEIKTISNSTNEKMKEIA 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
+ E ++ + V +
Sbjct: 123 NALNATHEGKYIFSGSNTGTPPVECVENADGSVSLKFNT 161
>gi|117620800|ref|YP_857336.1| flagellar hook-associated protein FlgL [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117562207|gb|ABK39155.1| flagellar hook-associated protein 3 [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 402
Score = 67.5 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/387 (10%), Positives = 97/387 (25%), Gaps = 7/387 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN L N L +++ +G + A ++ + S + +
Sbjct: 3 ITTNMVYDRNISSLNGANERLSTAYEQLMTGNKFKTAGEDPSGMSQKLALTKEIDLFKQY 62
Query: 64 SDAIGLGSSKV---DIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
L + + + ++ A+ T+ K D ++I SE+ LQ Q+
Sbjct: 63 GVNGSLLENSLGHEETVLTALNTAMTSAQTLIQKANDSAVGYEDRQAIASELEGLQKQMF 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY-YLDPETVLLDS 179
D+ + GE + + I + + D G+ I + +
Sbjct: 123 DLMNSKNSQGEYIFGGNQSKTQPFIQDASGNYVFQGDTGQRNIQVSPTVQIAANDSGFNL 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
R + I+V D + T
Sbjct: 183 FEIVPTRRTSSAGSANIQVGVADQGHFDSFYRNNYDPSLASNQYTVNTIAGTPDTYEIRD 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ + S + N+ + + ++
Sbjct: 243 GGGALLQSGDYVAGNKIPFNGLELTLSLPAGGAAQNFVLDPPQNNNILDGMSDFITALRD 302
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
++ KV + ++ +D +G V + + +
Sbjct: 303 PNITPDTFQLKVADATAHMKNARLNVDQGLGEIGGRMNGLEQVMGSNEGLSTLNQQARAK 362
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSIS 386
E + + I + + +
Sbjct: 363 VSEADLYEV---IATLSKEDAALSATQ 386
>gi|149191160|ref|ZP_01869418.1| flagellar hook-associated protein [Vibrio shilonii AK1]
gi|148834998|gb|EDL51977.1| flagellar hook-associated protein [Vibrio shilonii AK1]
Length = 294
Score = 67.5 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 20/208 (9%), Positives = 60/208 (28%), Gaps = 3/208 (1%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ L D N L V +++S+GL+++ +D+ + +K I S+
Sbjct: 13 QRSLMDNNIRLNKVFEQMSTGLKLNHLSDDPIAAVRLEGLKKTVSDNQQYQRNIENVQSQ 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ + ++ ++ + + G I E+ L++++ ++
Sbjct: 73 LTRYETNVNTLEELSQQVNELLLQGKNGTLDAQSRAGIVLELKSLKTEMLTTLNQANEGS 132
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+ TD+ + S + D + + +
Sbjct: 133 YLFSGTDITNQAISTTPPYTLNSNSDYRETKVGDDQYVPSNLTITDIIGTNAIFTDLDNA 192
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTIS 218
++ + + +
Sbjct: 193 IAELEVPTAGFTPALDSALDTNQALHQN 220
>gi|91976149|ref|YP_568808.1| flagellin [Rhodopseudomonas palustris BisB5]
gi|91682605|gb|ABE38907.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 762
Score = 67.5 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 72/207 (34%)
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
L ++ + +S S +A N+ + + +
Sbjct: 556 NDFASHTLGSSDGGAIGGTLSSTLTFSSASAPVADTNAQNTRAGLVKQYNDIMDQIKTTA 615
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
N + ++ K Y+ L ++ + + + A +
Sbjct: 616 QDASFNGVNLLDGDTLKLVFNETGKSTISIQGVSYNPTGLGLSTLTSGTDFIDNDATNSV 675
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ + T + A GS S + ++DF K + + ++ G L AD E+ A
Sbjct: 676 LAKLSTASTTLRSQASAFGSNLSIVQARQDFSKNLINVLQTGSSNLTLADTNEEAANSQA 735
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
L T+Q +AV ALS+ N S +L L R
Sbjct: 736 LSTRQSIAVSALSLANQSQQGVLQLLR 762
Score = 62.5 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 46/101 (45%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ +++ L+ L Q R+SSG +V+ A DN + A + + + +
Sbjct: 1 MSGIVLSNAVRQNLSSLQATADLLATTQSRLSSGKKVNSALDNPTNFFTASGLDARSSDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER 101
+ + D IG G + A G++ ++ + K+ ++
Sbjct: 61 NNLLDGIGNGVQILQAANTGITSLTKLVDSAKSIANQALQT 101
>gi|330501144|ref|YP_004378013.1| flagellar hook-associated protein FlgL [Pseudomonas mendocina
NK-01]
gi|328915430|gb|AEB56261.1| flagellar hook-associated protein FlgL [Pseudomonas mendocina
NK-01]
Length = 305
Score = 67.5 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 20/182 (10%), Positives = 58/182 (31%), Gaps = 3/182 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I + + + L + ++++ R+ +D+ ++ + +L
Sbjct: 1 MMRITNSQITSMMHNSMNASSAELGKLMQQMATNKRLLLPSDDPIASVRVLRVQREESSL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQS 117
I S + +A + D M +++ G D ++ E++ ++
Sbjct: 61 EQFRKNIANVSGSLSTQEANLKSTSDAMLNVRDLLLWAANGSNTSEDLSAMAGELSIIED 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ A G L + A + ++ N K + + + + +
Sbjct: 121 TIFSFANVRDEEGRYLFSGTLSDTPALAFDTATQTYSVTGNDKHRQAAVANGVLVDENVT 180
Query: 178 DS 179
+
Sbjct: 181 AA 182
>gi|238752856|ref|ZP_04614321.1| Bacterial flagellin N-terminus domain protein [Yersinia rohdei
ATCC 43380]
gi|238708895|gb|EEQ01148.1| Bacterial flagellin N-terminus domain protein [Yersinia rohdei
ATCC 43380]
Length = 91
Score = 67.5 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 44/88 (50%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI TN S+MSA + N + V R+++G R++ A+D+AA IA + S ++
Sbjct: 4 SIFTNASSMSAINSMNRANASQTVSAMRMTTGKRINSASDDAAGMQIASRLNSQVRGMNV 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMST 90
I S + A+ ++ ++++
Sbjct: 64 AMRNISDTKSMLKTAEGAFVESDNILNR 91
>gi|162147440|ref|YP_001601901.1| flagellin C [Gluconacetobacter diazotrophicus PAl 5]
gi|161786017|emb|CAP55599.1| putative flagellin C [Gluconacetobacter diazotrophicus PAl 5]
Length = 328
Score = 67.5 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 52/275 (18%), Positives = 94/275 (34%), Gaps = 3/275 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
SI TN S M A Q L +L ++ VS+G V+ AAD A + IAQ M + +
Sbjct: 3 LSINTNTSEMIALQTLDATQTSLSNTENAVSTGKSVATAADGPAAFGIAQQMSGNIAGQT 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKS---IQSEITQLQSQ 118
AV+ + + V ++ I ++ ++++ +T S +EIT +Q
Sbjct: 63 AVNSGLSFAAQVVSGTSDAANQIITLLQSVQHAVTNLGNDSGSPTSLGQDATEITGYLAQ 122
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ IAR ++FNG N L + ++++ + + +
Sbjct: 123 IDTIARNATFNGVNLLAGSTTDGSGITSQTLNYVTGLQGDTQSVSGFNSMISKDMSGATS 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ T L ++ VS SGT + + A A
Sbjct: 183 TGTASLSLSEALGLAVGGSAGGNATANVFVSFNPTSGTGAFTGTFGNSAGIASTGVAMMI 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
I + A N + + +
Sbjct: 243 TQVQDAITAMTNVTSTLGNASNLIASMTTYGTTVS 277
Score = 63.6 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 59/132 (44%)
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + + T T A + M++ + I T
Sbjct: 197 AVGGSAGGNATANVFVSFNPTSGTGAFTGTFGNSAGIASTGVAMMITQVQDAITAMTNVT 256
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G+ S+ I + + D + GVG L DA+MA+ES +L++LQT+Q LA+++L+I
Sbjct: 257 STLGNASNLIASMTTYGTTVSDDLTAGVGALTDANMAAESAQLTSLQTKQSLAIKSLTIA 316
Query: 440 NNSTARILSLFR 451
N + IL LF+
Sbjct: 317 NGQSQNILQLFQ 328
>gi|197120115|ref|YP_002140542.1| flagellar hook-filament junction protein FlgL [Geobacter
bemidjiensis Bem]
gi|197089475|gb|ACH40746.1| flagellar hook-filament junction protein FlgL [Geobacter
bemidjiensis Bem]
Length = 306
Score = 67.5 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 56/149 (37%), Gaps = 3/149 (2%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
+A +A L+ +++ +Q++V+SGL ++ +D+ ++ A S I
Sbjct: 7 MTAENALYNLQKGRSSIDTLQEQVASGLNINKPSDDPLSSRQLLDLQEQINAGEQYSSNI 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKI---TAGVERGTDSKSIQSEITQLQSQLRDIAR 124
+++ ++ ++ +K +G + T + +TQL+SQL D+
Sbjct: 67 TKAGLLLNVTSTALTSMSGLLQQVKKIAGDMVSGTQDPTSVSGAVTNLTQLKSQLIDMGN 126
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+ + ++
Sbjct: 127 TRVGDQYVFAGFKNSPPFDNLGNFSGTDD 155
>gi|254225808|ref|ZP_04919413.1| flagellar hook-associated protein FlgL [Vibrio cholerae V51]
gi|125621714|gb|EAZ50043.1| flagellar hook-associated protein FlgL [Vibrio cholerae V51]
Length = 397
Score = 67.1 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 45/430 (10%), Positives = 102/430 (23%), Gaps = 54/430 (12%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N+ A+ +R + Q +++SG ++ A+DN Q + L D
Sbjct: 9 HNYQAV--QNDIRRQESKVFNNQAQLASGKKLLSASDNPLATHYIQNVGQQEEQLRQYLD 66
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
AI L ++++ + +S + + K + + + + LQ
Sbjct: 67 AIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQE------MA 120
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
++F ++ + G+ + K F RD+ G V
Sbjct: 121 NNFINLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYA--------------------- 159
Query: 186 RYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGI 245
D L G
Sbjct: 160 -------------------------GDDYQRKMKISNSLEIPFNNPGSKVFMEIPNPFGS 194
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
L + S + + + + +
Sbjct: 195 YEPNYALQEGSELLLERAVNLNPDDTSSYRVTFVDMPEGKNGYQLERNGSVVQAGEFDAK 254
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
+ + S + + + + ++V
Sbjct: 255 TGIQFEELNIQLKGQISKGDAIELTPRTTFSVFDTFRDAIRYAEGSVSDASNTAKLHQLV 314
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
T IG+ S + +QE+ + + ++ K D D A +
Sbjct: 315 EEFHTAFIHLNKTRTDIGARLSTLDIQEEQHEDFKISLAKSKSTFEDLDYAEAVIDFNEN 374
Query: 426 QTQQQLAVQA 435
+ + +A
Sbjct: 375 SRALEASQKA 384
>gi|85715034|ref|ZP_01046019.1| hypothetical protein NB311A_11697 [Nitrobacter sp. Nb-311A]
gi|85698231|gb|EAQ36103.1| hypothetical protein NB311A_11697 [Nitrobacter sp. Nb-311A]
Length = 524
Score = 67.1 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/310 (12%), Positives = 88/310 (28%)
Query: 142 TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
T + G + L + ++ L + I
Sbjct: 215 TGGTSSVSGGQITLGTGTTEDLVISGSGLAKIGLTAGTTALTPGTTALSGKTLTIGATAD 274
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
A + + A + + N+ +
Sbjct: 275 GTATSVTFGTGAGQINTLDQLNTALAANNLTASINSAGAITFTTTNDYASATIGAFGGDA 334
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
T+ + + + +A N+ + + N +
Sbjct: 335 TTDPNTFGAMTASAPVEDANAQNTRATLIGQYNQVVDQIRTTAQDASFNGINLLNGDQLK 394
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
++ K + L + + + + +++ ++T + A
Sbjct: 395 LVFNETGKSTLTIQGVTFDPAGLGLASLVKGTDFLDNASTNKILDSLNTASSTLRSQAST 454
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
GS S + +++DF K + + ++ G L AD E+ AL T+Q +AV AL++ N
Sbjct: 455 FGSNLSIVQIRQDFSKNLINVLQTGSANLTLADTNEEAANSQALATRQSIAVSALALANQ 514
Query: 442 STARILSLFR 451
S +L L R
Sbjct: 515 SQQSVLQLLR 524
Score = 61.7 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/379 (11%), Positives = 102/379 (26%), Gaps = 2/379 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ + S L+ L Q R+++G +V+ A DN + A + S +
Sbjct: 1 MSDIVLSASVRQNLLSLQSTAELLSTTQTRLATGKKVNSALDNPTNFFTAAGLDSRASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + D+IG G + A G++ ++ T K+ ++ + + T +
Sbjct: 61 NNLLDSIGNGVQVLQAANTGITSLQKLVDTAKSIANQALQATSGYSTKSQATTAAIT--G 118
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A + S + + I + +
Sbjct: 119 ATADNLLGTAGAPTANSVTGSVVQNDDTDGAANITGATLLSGTPGSGSNNLASGFTISDT 178
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + D+D +
Sbjct: 179 IVVNGTTISFVASGATGDQLNITDDVDTLLAKIDSITGGTSSVSGGQITLGTGTTEDLVI 238
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
G+A I + P TT+ + + + A T + + T + + +
Sbjct: 239 SGSGLAKIGLTAGTTALTPGTTALSGKTLTIGATADGTATSVTFGTGAGQINTLDQLNTA 298
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
N T + T + + + +T A + N +
Sbjct: 299 LAANNLTASINSAGAITFTTTNDYASATIGAFGGDATTDPNTFGAMTASAPVEDANAQNT 358
Query: 361 MEEMVSFIDTQIKCATAAA 379
++ + + A
Sbjct: 359 RATLIGQYNQVVDQIRTTA 377
>gi|296135665|ref|YP_003642907.1| flagellar hook-associated protein 3 [Thiomonas intermedia K12]
gi|295795787|gb|ADG30577.1| flagellar hook-associated protein 3 [Thiomonas intermedia K12]
Length = 417
Score = 67.1 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/448 (9%), Positives = 121/448 (27%), Gaps = 35/448 (7%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ ++ + + L + ++S+G + + +D + + L+
Sbjct: 3 ISTSQFYAASLTGILNQQNTLGTLSQQLSTGSTLVNPSDQPVAAAQNVALTGQIDRLAGY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + A + ++S + S+ +Q+ +Q ++ +A
Sbjct: 63 AQNGQNAQNSLQLESATVQSVTTLVSQARQLAVQMNNGTVSSQDLQNAAATMQGYVQQLA 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ ++ GS + + + G + + T + D
Sbjct: 123 QYANTQDGQGNYLFAGSKSGAQPFVIQADGSVQYQGDGGQNQLALGPNLNTAIGDPGNAL 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + + T ++ + + + +
Sbjct: 183 FMNARAGNGTFSVNAASSNTGGATAGPGTVNNTALAQQTLQVDGTQYQISFSGSGGSMTY 242
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+A+ +A + + S S
Sbjct: 243 SVASGTGGAFSASPVASGSFTPGMSISL------------------------------PP 272
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
++ V +S T+ + + + + ++
Sbjct: 273 GSNPAITVPIVGTPSSGDSFTIGAAAPQSLFQTFQSLAQAFSASAQTSGSNALRAQSISN 332
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ +D +A IGS ++ + + ++ +L + T
Sbjct: 333 ALASLDQNQTNLLSAQASIGSRLQQVQAVQTQNASLTLQLQTQQTQLTSINYPQVITEYQ 392
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
+ T Q A +A + V LSLF+
Sbjct: 393 SSLTALQAAQKAFTQVQG-----LSLFQ 415
>gi|296271933|ref|YP_003654564.1| flagellin domain-containing protein [Arcobacter nitrofigilis DSM
7299]
gi|296096108|gb|ADG92058.1| flagellin domain protein [Arcobacter nitrofigilis DSM 7299]
Length = 279
Score = 67.1 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/175 (13%), Positives = 61/175 (34%), Gaps = 3/175 (1%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDV 87
+++++ ++ A+D+ A +I+ + + L+ I S + I + + + D+
Sbjct: 26 LEKIATNKELTKASDDPALLAISDQLNYEQSGLTQGVQNINSALSYLQIGDSALGEQSDI 85
Query: 88 MSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
++TI+ K I+++I++L Q +IA +S+ + L+ + S
Sbjct: 86 LNTIREKTLQAATDTTSDDQRNIIRNDISKLLEQFDNIASSTSYGDNSILQKNQDDKGES 145
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
D+ + + L T +
Sbjct: 146 NTFDAQTGTDSQDSTSLNPLQSNTQGLGLDGFLQDGTFSADDARTFLDTIDQASA 200
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/203 (13%), Positives = 51/203 (25%), Gaps = 1/203 (0%)
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
L NT + + + + N + N +S NS +
Sbjct: 76 DSALGEQSDILNTIREKTLQAATDTTSDDQRNIIRNDISKLLEQFDNIASSTSYGDNSIL 135
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
K + +T + ++ S D + I
Sbjct: 136 QKNQDDKGESNTFDAQTGTDSQDSTSLNPLQSNTQGLGLDGFLQDGTFSADDARTFLDTI 195
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
D IGS + ++ + + + + D A E + S
Sbjct: 196 DQASAKLQDFRSDIGSTAQQLESSYTSMSAQVVNNSSALSTISNVDFAKEVSSFSKQNIL 255
Query: 429 QQLAVQALSIVNN-STARILSLF 450
Q+ S NN + +L L
Sbjct: 256 AQIGSFGQSQANNINQQSVLRLL 278
>gi|255099396|ref|ZP_05328373.1| flagellar hook-associated protein [Clostridium difficile QCD-63q42]
gi|255305253|ref|ZP_05349425.1| flagellar hook-associated protein [Clostridium difficile ATCC
43255]
Length = 310
Score = 67.1 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 19/175 (10%), Positives = 60/175 (34%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + S L+D L+ V +V++ ++ +DN KS+ +
Sbjct: 3 VSTGMMSSSYLNSLQDNLQRLDKVNRQVNTTKEINKLSDNPYKAIKILNSKSEIKTMETY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + ++ + + ++S IK + A + +++ + ++++IA
Sbjct: 63 VENCKDTGNWLETTDTALDQLGKLLSDIKKTLVASGDGAYSDDELKTLSNETNEKMKEIA 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ E ++ + + + ++ D ++ +
Sbjct: 123 NALNATHEGKYIFSGSNTGVPPVECIDNADGSVSLKFNSSLNLNKLNDSLSMDIA 177
>gi|39935366|ref|NP_947642.1| flagellin [Rhodopseudomonas palustris CGA009]
gi|39649218|emb|CAE27738.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
Length = 935
Score = 67.1 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ A +++ + T + A GS S + ++DF K + + ++ G L AD
Sbjct: 841 DNNATNAVLTKLSTASTTLRSQASAFGSNLSVVQARQDFSKSLINVLQTGSANLTLADTN 900
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV ALS+ N S +L L R
Sbjct: 901 EEAANSQALSTRQSIAVSALSLANQSQQGVLQLLR 935
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 89/272 (32%), Gaps = 1/272 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ +++ L+ L Q R+SSG +V+ A DN + A + S +
Sbjct: 44 MSGIVLSNAVRQNLSSLQATADLLATTQSRLSSGKKVNTALDNPTNFFTAASLDSRASDI 103
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ-SQL 119
+ + D IG G + A G++ ++ + K+ ++ S + + +
Sbjct: 104 NNLLDGIGNGVQILQAANTGITSLNKLVDSAKSIANQALQTVAGYASKSNVSATISGATA 163
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
D+ SF+ + TA A + + + + +
Sbjct: 164 DDLRGTQSFSNAVASSNVVFDGTAGGASTASATDLLGGIAVSIAASAAVTVVGAADNTGL 223
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ T K+ + ASG T K T + A A++
Sbjct: 224 GSALTIGTSGGSATGASKISDLTNGVTATATGPASGDAITVNGKTITFTTAGTAKADSEG 283
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
+ G+ L A N + + + +
Sbjct: 284 NYTIGLDQDLTALTKTIDAMNNNTTNASAVTA 315
>gi|212637792|ref|YP_002314317.1| flagellin [Shewanella piezotolerans WP3]
gi|212559276|gb|ACJ31730.1| Flagellin [Shewanella piezotolerans WP3]
Length = 305
Score = 67.1 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 21/172 (12%), Positives = 53/172 (30%), Gaps = 3/172 (1%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+ Q L++ ++ + +++G + +D+ + D A + S
Sbjct: 11 NNLQSLQNSTADISKLNQMMATGKSILRPSDDPIGSVKVIGGQRDLAATNQYIKNTESLS 70
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSF 128
+ A+ MS +++ + ++ A D + +E+ +L D
Sbjct: 71 TSFSRAETYMSSMVELQTRMREITVAANNGSLSPEDRAAYAAEMEELLEAFTDTVNAKDE 130
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
G +L + + + DN ++ T V
Sbjct: 131 GGNYLFSGNLTDTAPISKDASGNYLYQGDNNHREVQTSGSSWMTANVTASEF 182
Score = 37.4 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
A +M++ +D + ++A IG + I L + + E+ +G D
Sbjct: 213 TFSQAATDMLTSLDDTLTSISSAITDIGGKQNTISLIQTSHEERVLFNEEVIGETEGLDY 272
Query: 416 ASESTR----LSALQTQQQLAVQA 435
A + L+AL+ QQ VQ
Sbjct: 273 AQATAEFNLKLTALKVTQQTFVQV 296
>gi|330961206|gb|EGH61466.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 530
Score = 66.7 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/344 (11%), Positives = 99/344 (28%), Gaps = 3/344 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + NL + VSSG++++ A+D+ S + N L+
Sbjct: 3 ISTTQFYEATNTNYQRNYANLNKTSEEVSSGIKLNTASDDPVGASRVLQLAQQNSMLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ IG ++ V + ++ ID M + + +I GV ++ + + Q Q QL
Sbjct: 63 AANIGTINTNVVSTETALTSIIDTMQSAREEIISASNGVNTDSERLTKAESLKQYQGQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ NG+ L S+ + + D + + D + +
Sbjct: 123 ALMNSKDANGQYILAGSKSSTPPYSLNADGFYSYKGDQTSINLAVGDGLVMASNTTGYEA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + ++ T ++ + +L
Sbjct: 183 FEQSVNSTRASATLISPATDDGKIGLSAGQVTSTPTYNSSYQAGEPYTLTFLSGTQFKIT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ G A +T + + + + A + S
Sbjct: 243 DSTGTDVSSDASSAGKFGNSTFEAQTFTFRGVEMTLNVNLPAADRVSEATADAALTNRSY 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTL 344
+ + T + + + + + + +
Sbjct: 303 QLSSTPDSVSTSRSAGNTSTANVSSSTVGNTAADRTAFNNTFPT 346
Score = 38.6 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 39/345 (11%), Positives = 90/345 (26%), Gaps = 7/345 (2%)
Query: 98 GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157
T ++ + + ++ I+ + + S+ + G
Sbjct: 173 MASNTTGYEAFEQSVNSTRASATLISPATDDGKIGLSAGQVTSTPTYNSSYQAGEPYTLT 232
Query: 158 NGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI 217
I + SS + + L + S
Sbjct: 233 FLSGTQFKITDSTGTDVSSDASSAGKFGNSTFEAQTFTFRGVEMTLNVNLPAADRVSEAT 292
Query: 218 STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASA 277
+ + + + +T A +T V + + + A
Sbjct: 293 ADAALTNRSYQLSSTPDSVSTSRSAGNTSTANVSSSTVGNTAADRTAFNNTFPTGGAILK 352
Query: 278 TYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
T+ + S + ST G + T + + +
Sbjct: 353 FTSATDYDLFASPLTSSSKPVSSGTMSGSTANASGVNFNFSGTPAAGDQFIVESGTHQNE 412
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ-------IKCATAAAGKIGSISSRIH 390
+ +T + +A ++M + +D+ I A+ A G+
Sbjct: 413 NILNTLTAAIKALSTPVDGDLVATQKMKASLDSALGNITSGIAQASTARANGGARQLAAS 472
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
Q +L++ G V+AD+ +TRL+ +T + Q
Sbjct: 473 AQGTTNELLKANNTIEQGTYVNADIVEATTRLTLQKTMLDASQQV 517
>gi|268317788|ref|YP_003291507.1| flagellar hook-associated protein 3 [Rhodothermus marinus DSM 4252]
gi|262335322|gb|ACY49119.1| flagellar hook-associated protein 3 [Rhodothermus marinus DSM 4252]
Length = 310
Score = 66.7 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 24/195 (12%), Positives = 72/195 (36%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
+ A +++++ L +Q+++++G RV+ +D+ ++ +Q ++ + +G
Sbjct: 17 LLAERQIQERRLELARLQEQMATGRRVNRPSDDPGTYTRSQALRRLAQRYDQHERTLTIG 76
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ + + +S +D+ ++ + + + L+ +L+ + +
Sbjct: 77 RAWLTATEDALSTLVDLFNSAYEEGVRMATDTASTADRATTADVLEQRLQAVLDQLNARH 136
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+T + G+ + + N + + I L L + + G
Sbjct: 137 NGEYLFAGTRTTMQPFQLSGGTVVYNGNDQTRQLEIAPGLQIAVNLTGNDVWEVDENGDG 196
Query: 191 DRNHKIKVEPQVLKD 205
+ I Q L D
Sbjct: 197 VTDFTITEAWQDLID 211
Score = 49.0 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/195 (12%), Positives = 55/195 (28%), Gaps = 1/195 (0%)
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
T A A + + + Y+ G G
Sbjct: 104 MATDTASTADRATTADVLEQRLQAVLDQLNARHNGEYLFAGTRTTMQPFQLSGGTVVYNG 163
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
+ ++ + D + + +++ A + ++
Sbjct: 164 NDQTRQLEIAPGLQIAVNLTGNDVWEVDENGDGVTDFTITEAWQDLIDALRADDTAQ-IQ 222
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
++ ++T ++G S R+ + E ++ R +E L DAD A + +L
Sbjct: 223 NAMARVETARDHLLDRIAQVGETSRRLSMAETELQDARLRLESQRSDLEDADFAEIAVKL 282
Query: 423 SALQTQQQLAVQALS 437
Q + +Q S
Sbjct: 283 QRHQLSLEATLQVTS 297
>gi|218135313|ref|ZP_03464117.1| hypothetical protein BACPEC_03218 [Bacteroides pectinophilus ATCC
43243]
gi|217990698|gb|EEC56709.1| hypothetical protein BACPEC_03218 [Bacteroides pectinophilus ATCC
43243]
Length = 325
Score = 66.7 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 13/114 (11%), Positives = 44/114 (38%), Gaps = 2/114 (1%)
Query: 6 TNHSAMS-ASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN ++ + + L + ++S+ +++ +++ A ++S ++
Sbjct: 4 TNTMMINNSLANIAVNKNQLSTLDTQMSTKKKINRPSEDPIIAIRALRLRSSLNEVTQYL 63
Query: 65 -DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQS 117
I +S + + + + + +V+S + G ++ + LQ+
Sbjct: 64 EKNIPDANSWMKVIQGALEEGENVVSDLYKNCNQGATDSYSTEQRATLADDLQN 117
>gi|148266108|ref|YP_001232814.1| flagellar hook-associated protein 3 [Geobacter uraniireducens Rf4]
gi|146399608|gb|ABQ28241.1| flagellar hook-associated protein 3 [Geobacter uraniireducens Rf4]
Length = 298
Score = 66.7 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 56/154 (36%), Gaps = 3/154 (1%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N +A L+ I E +Q + S+G ++S D+ +KS A +
Sbjct: 6 NTTANLVLNNLQVIRERQEQLQQQSSTGAKISAPGDDPVNTQQILHLKSLTAAGEQYARN 65
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRDIA 123
I G+S + +A + M+ DV+S K A + +E+ QL+ Q+ +
Sbjct: 66 ITNGTSLLTMADSAMAGMGDVLSRAKELAVAMSSDTNNADSRTAAVNELQQLKGQIITLG 125
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157
+ + A + G+ +
Sbjct: 126 NTQLNGKYIFGGFKNDTPPFDAAGNFTGTNDDIN 159
Score = 53.2 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 29/74 (39%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
A++ + +D+ + AA +G+ +R+ + ++ K + + D
Sbjct: 203 NAGSTSAVQAELPNLDSAMSQVLAARSDVGARMNRLDGSSQVNDNTKLSLTKILSNIQDV 262
Query: 414 DMASESTRLSALQT 427
D + LS QT
Sbjct: 263 DYMQVISDLSKQQT 276
>gi|225166311|ref|ZP_03728000.1| Flagellin and related hook-associated protein-like protein
[Opitutaceae bacterium TAV2]
gi|224799448|gb|EEG17988.1| Flagellin and related hook-associated protein-like protein
[Opitutaceae bacterium TAV2]
Length = 311
Score = 66.7 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/192 (13%), Positives = 56/192 (29%), Gaps = 2/192 (1%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+L ++ +Q++V++G RV+ D+ A + + ++ + +
Sbjct: 15 QLTRLSERQTRLQNQVATGQRVTVPGDDPAAVGRILSNQMEQRQVAQYQNNASKALEYSE 74
Query: 76 IAKAGMSKAIDVMSTIKNKIT--AGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
+ +S + T AG + E+ QL Q D+A
Sbjct: 75 ATYSTLSDLKGISDRAGELATLGAGATSTDAMTAYAVELDQLIQQALDLANTRFSGDYLL 134
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
T + ++A G+ G TI + L+R
Sbjct: 135 SGTATDTQPFTLATDADGNTTITYEGNTDQRTIALSETSHLAPGTTGDTNHAIATFLNRL 194
Query: 194 HKIKVEPQVLKD 205
++
Sbjct: 195 IDLRDTLNTGDT 206
>gi|207110926|ref|ZP_03245088.1| flagellin A [Helicobacter pylori HPKX_438_CA4C1]
Length = 75
Score = 66.7 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 35/69 (50%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
L+ +R+SSGLR++ AAD+A+ ++A ++S +L G + +A
Sbjct: 7 TQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASSLGQAIANTNDGMGIIQVADK 66
Query: 80 GMSKAIDVM 88
M + + ++
Sbjct: 67 AMDEQLKIL 75
>gi|224373380|ref|YP_002607752.1| flagellar hook-associated protein FlgL [Nautilia profundicola AmH]
gi|223589952|gb|ACM93688.1| flagellin family protein [Nautilia profundicola AmH]
Length = 881
Score = 66.7 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/416 (8%), Positives = 105/416 (25%), Gaps = 12/416 (2%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N+ ++ + L L VQ ++S+G+++ + ++ ++ + + + + + +
Sbjct: 21 NNFILNQQRTL----SELNKVQTQISTGVKIQNMYEDPVVYTKYLKLNEEMNSFTQIKTS 76
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + ++ + + + K K T +I SE+ L+D+A
Sbjct: 77 ASFAQTFANETDTVLNDFVSTLGSFKTNLLKAANDTNDETSRSAIVSELEGELQHLKDLA 136
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
S + + + + G+ + +Y +D T+ L D
Sbjct: 137 NTSIDGKYLFSGSKFSTKPINDNFDYQGNADKVKAFLGAGVEREYNIDGVTLFLGRDNDY 196
Query: 184 TERYGLLDRNHKIKVEPQ-----VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
++ + + + +
Sbjct: 197 SKHISTNVVQYDKMKANPQFVVRGSDGKLYIDKSIKEHGKVADSQENPVNEPITGDSQIR 256
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
P + + + + N + + +
Sbjct: 257 MLTGVEDIYDPNTDTYSDGTSYFYIKGKKANGDLINEKISLKNSDNVNDLLEKIGEIYGN 316
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ D ++ + + + S+ L +
Sbjct: 317 TPTTKMVDVSLNDMGQIQIKDIQTGKMLTDFYMVASDKDEPSVEDLVKNGDYIVEFQKSD 376
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+S I + K GS + + D + G + D D
Sbjct: 377 FNAIRNLSAIQSNNDYFDNRISKFGSKFKTLDTKRDALPSDTLFNVLGEQGVRDID 432
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/374 (11%), Positives = 105/374 (28%), Gaps = 7/374 (1%)
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSS---- 127
S + I + + + +K A ++ K+ + + ++D
Sbjct: 502 SNLKININAFDSSDNSLQVFASKDVANFQKIYMDKNGNEINSNVSQIIKDYKITYKDGQK 561
Query: 128 -FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
+T + + ++ K + + T+ DG
Sbjct: 562 IVEKNPLAQTYATDNASIADTMGTDEMPQEIKIKFRDKNGELKTAVITLRDTPDADGHLS 621
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+D N+ + + DI + T +
Sbjct: 622 NFWIDTNNDGVRDSNEVYDIYEPDGSLTPAHDTITTTTQMDPDTCKVCQKEVLQKGMTYK 681
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
+ + + S T+ + ++ A+ + G D NS +
Sbjct: 682 QLGDVVSMLTSGNLPASNTADDYNNAINAAKEQVVTGMDDKGKFYLKDNSNNPTNIDLSI 741
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ + N + +++ ++ +
Sbjct: 742 YTDNNSLYFQANNAVTIDEPQVDFFDT--LQKAIDAVKNGNNYPDSEKNPRSFGIQGAIE 799
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
ID + KIG++S+ L + ++ V++ +D D+ + RL++LQ
Sbjct: 800 AIDHLTDHVRRSHAKIGAVSNEFGLTIERTDMLTLNVQQLQSDNIDTDLGEATMRLNSLQ 859
Query: 427 TQQQLAVQALSIVN 440
T Q + +++ VN
Sbjct: 860 TSYQALLASIAKVN 873
>gi|294508670|ref|YP_003572729.1| flagellar hook-associated protein FlgL [Salinibacter ruber M8]
gi|294344999|emb|CBH25777.1| flagellar hook-associated protein FlgL [Salinibacter ruber M8]
Length = 320
Score = 66.3 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/205 (11%), Positives = 72/205 (35%), Gaps = 6/205 (2%)
Query: 3 SILTNHS--AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
SI TN S + S ++ + ++ +++++SSG R++ +D+ + ++ A+ MK+ L
Sbjct: 5 SIATNSSVYSGVISDEVPRLQRDISRLREQISSGKRINRPSDDPSSFATAERMKTLGNQL 64
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQS 117
+ ++I + VD + + D+ + + + D +I +E+ ++
Sbjct: 65 ARREESIASARTFVDRTQQELDGLADLFTRAREDGVRAADDTRSADDRAAIANELRSIKG 124
Query: 118 Q-LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+ + + + + + I + + +
Sbjct: 125 EVVDRMNSTQDGEYIFAGNRTDTQPFGADGSANDAAPINGSLDALDGDRTRPIGKNQDLT 184
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQ 201
++ +Y +
Sbjct: 185 VNVDGKALAQYDTTAGGDPETITGA 209
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 33/81 (40%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ ++ + + + G+I R+ ++ ++ + D D+A+ + L
Sbjct: 235 TALGEVEDALDHVISKGSEAGAIGRRLSTAQEQVEAASLEANERRSDAEDTDLATAISEL 294
Query: 423 SALQTQQQLAVQALSIVNNST 443
QTQ Q A QA S ++
Sbjct: 295 QQRQTQLQAAFQATSSSQQTS 315
>gi|152975170|ref|YP_001374687.1| flagellin [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152023922|gb|ABS21692.1| flagellin [Bacillus cytotoxicus NVH 391-98]
Length = 267
Score = 66.3 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 43/107 (40%)
Query: 345 NITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVE 404
+ + +T + + + ++ I+ ++ + IG I R+ D + +
Sbjct: 160 HQKINDSTSSTPTNITVSTAIANIELALQTLSRYQENIGIIIKRLQSDVDCLTNHATTMI 219
Query: 405 KGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ DA++ E ++ + ++ + +S N IL+L +
Sbjct: 220 TASSRMEDANIVQEMSKCVKDRLLTEITLSTISQANQVPQMILTLLQ 266
Score = 50.5 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/179 (11%), Positives = 51/179 (28%), Gaps = 6/179 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN Q L + ++ R++ A+N +A M +
Sbjct: 3 IGTNI---QVLQMLNQNETYGNQTAEHSTTRKRMNHTANNDNELVLATRMHVREQQVHIA 59
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI---TAGVERGTDSKSIQSEITQLQSQLR 120
S + + ++ +++ +G+ + ++ E +L Q+
Sbjct: 60 IRNNENAISLLRRMDTSLQTINRILIRMRDIAVHTVSGINSSVNQNALDKEFQELIKQIG 119
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
I +SF+ + + + K Q P + + +
Sbjct: 120 YINDTNSFHDIPFFKYGDKLENVVHILRKTVNLSSSSLRKHQKINDSTSSTPTNITVST 178
>gi|330953733|gb|EGH53993.1| flagellar hook-associated protein FlgL [Pseudomonas syringae Cit 7]
Length = 530
Score = 66.3 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/344 (11%), Positives = 94/344 (27%), Gaps = 3/344 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + + NL + VSSG++++ A D+ + + N L+
Sbjct: 3 ISTTQFFESTNTNYQRNYSNLNKTSEEVSSGIKLNTAGDDPVGAARVLQLAQQNSMLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
IG ++ + ++ ID M + +I + +D + S + Q QSQ+
Sbjct: 63 ETNIGTINTNAVTTETTLTSIIDTMQAAREQIVSAGSGAFTDSDRLAKASALKQYQSQIL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ NG+ S+ + + D V + D + +
Sbjct: 123 GLMNSQDPNGQYIFSGSKASTPPYSLNADGSYSYKGDQTSVNLAVGDGLVMASNTTGFEA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + ++ T ++ + +L
Sbjct: 183 FEQSVNTTRTSATLLSPATDDGKIGLSSGLVTSTPTYNSSYQGGEPYTLTFLSGTQFKIT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A G + + + + + + A + S
Sbjct: 243 DASGTDVSSDTSTGGKFSHGSFDAQTFTFRGVEMTLNVNLPAADRVSDATADAALANRSY 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTL 344
+ + T + + + + + +
Sbjct: 303 QLASTPDSVSTSRSAGNTSTATVSSSVVGNTAADRTAFNNTFPT 346
Score = 44.7 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 59/466 (12%), Positives = 120/466 (25%), Gaps = 28/466 (6%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRV-SSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I TN A++ L I ++ ++++ S+G +D A S + +S L
Sbjct: 68 TINTN--AVTTETTLTSIIDTMQAAREQIVSAGSGAFTDSDRLAKASALKQYQSQILGLM 125
Query: 62 AVSDAIGLGS---SKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQ 118
D G SK ++ + + + Q
Sbjct: 126 NSQDPNGQYIFSGSKASTPPYSLNADGSYSYKGDQTSVNLAVGDGLVMASNTTGFEAFEQ 185
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ + TD G S + T+ + + + D
Sbjct: 186 --SVNTTRTSATLLSPATDDGKIGLSSGLVTSTPTYNSSYQGGEPYTLTFLSGTQFKITD 243
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+S + + T+ A L +
Sbjct: 244 ASGTDVSSDTSTGGKFSHGSFDAQTFTFRGVEMTLNVNLPAADRVSDATADAALANRSYQ 303
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ A ++S + + A + T+ G + T
Sbjct: 304 LASTPDSVSTSRSAGNTSTATVSSSVVGNTAADRTAFNNTFPTDGAILKFTSPTDYELYA 363
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY--- 355
+ ++ V+ T + + T NT
Sbjct: 364 APLTTSSKPVSSGTMTGSTANASGVNFNISGTPAAGDQFIVESGTHQTENILNTLTAAIK 423
Query: 356 --------------NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
N A+ + + + I+ A+ A G+ Q L++
Sbjct: 424 ALSTPTDGNLVASQNMTAALNSALGNMSSAIEQASTARSSGGARQLAATAQGTTNDLLKG 483
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQ---ALSIVNNSTA 444
G V+AD+ +TRL+ +T + Q LS +N +
Sbjct: 484 NNTTEQGTYVNADIVEATTRLTLQKTMLDASQQVFTMLSKLNLFSQ 529
>gi|322805110|emb|CBZ02670.1| hypothetical protein H04402_00858 [Clostridium botulinum H04402
065]
Length = 336
Score = 66.3 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/303 (7%), Positives = 85/303 (28%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
++S+ +V+ AAD+ + + + + + I G S + + + ++ ++ +
Sbjct: 2 KLSTNKKVNIAADSPSEIERINRINTSVRSRNIAVRNIQEGISLLQVKENAVNDLKEMGT 61
Query: 90 TIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSV 149
+K + ++ + +S L ++ N G +
Sbjct: 62 RLKELSLIYKNNTLNEDDKKNIEYEAKSLLDNMYFTIKNTKFNGKNLFTGEKLNIQGSTY 121
Query: 150 IGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
D + +I + + + ++ + + ++ +++
Sbjct: 122 NTDIKLMDFKVPKEDSIFIGNNKSSNESHTIKISDTEIDVILKKYNLEKANKIIFYESEM 181
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
V + + + + +
Sbjct: 182 VDKHNIKTVFTSKYGYKNNANIDIVNVSNNVNKMFSINGTINDNSEVKGYLQEEDNKLIG 241
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ ++ I++ + T NSI + N+ + + + S + K
Sbjct: 242 NININDKEYNIQLETTMEDALKTNLNSIKTTIINKNNHTFRGNTSIVDIQDNSGMTYTSK 301
Query: 330 DLP 332
++
Sbjct: 302 EIT 304
>gi|93518733|gb|ABD64504.1| flagellin [Bacillus thuringiensis serovar pakistani]
Length = 195
Score = 66.3 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 19/195 (9%), Positives = 55/195 (28%)
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+A G+ A + T + + + + +
Sbjct: 1 MHARASGMRVAIRNNEDAISMLRTAEAALQTVANILQRMRDLAVQSANGTNSNKNRDSLN 60
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
T T + + + L + ++ + + +
Sbjct: 61 KEFQSLTEQICYIGETTEFNDLSVFDGQNRPVTLDDIGHTVNVTKHISPSPTQHDINIST 120
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ + I+ ++ + +G++ +R+ + + A+ R+ DADMA
Sbjct: 121 EQEARAAIRKIEEALQNVSLHRADLGAMINRLQFNIENLNSQSMALTDAAPRIEDADMAQ 180
Query: 418 ESTRLSALQTQQQLA 432
E + + ++A
Sbjct: 181 EMSDFLKFKLLTEVA 195
Score = 60.1 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 13/120 (10%), Positives = 30/120 (25%), Gaps = 3/120 (2%)
Query: 53 MKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQ 109
M + + S + A+A + +++ +++ + S+
Sbjct: 1 MHARASGMRVAIRNNEDAISMLRTAEAALQTVANILQRMRDLAVQSANGTNSNKNRDSLN 60
Query: 110 SEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
E L Q+ I + FN + T + Q
Sbjct: 61 KEFQSLTEQICYIGETTEFNDLSVFDGQNRPVTLDDIGHTVNVTKHISPSPTQHDINIST 120
>gi|150020517|ref|YP_001305871.1| flagellin domain-containing protein [Thermosipho melanesiensis
BI429]
gi|149793038|gb|ABR30486.1| flagellin domain protein [Thermosipho melanesiensis BI429]
Length = 266
Score = 66.3 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 22/188 (11%), Positives = 56/188 (29%), Gaps = 3/188 (1%)
Query: 43 NAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG 102
+ A +I + M+S V + I G ++ A + +S D + ++
Sbjct: 39 DIAGAAIYERMRSQIERYGKVIENIYTGVDMLNTADSALSSIYDNLQRMRELAVQASNGT 98
Query: 103 ---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
+ ++ E QL Q++ + + FN + L + + + + I N
Sbjct: 99 LTENERAALNEEYNQLLEQIKTTVKNTEFNNKQLLTGNFENIEIQVNPNGKSQNISIPNV 158
Query: 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
+ I+ ++ + + + + V A+ +
Sbjct: 159 QTDALNIEDTNILTIENAHTAIERLDNAINTISETRSNIGANVNALKQYGAVAANAFENI 218
Query: 220 KKFKLATT 227
Sbjct: 219 TSSTSNIH 226
Score = 57.4 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 13/139 (9%), Positives = 36/139 (25%)
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
N + ++ + + + + + + +D
Sbjct: 127 FNNKQLLTGNFENIEIQVNPNGKSQNISIPNVQTDALNIEDTNILTIENAHTAIERLDNA 186
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I + IG+ + + + + + D D+A ++ Q
Sbjct: 187 INTISETRSNIGANVNALKQYGAVAANAFENITSSTSNIHDTDIAKTLLEITKNNILSQT 246
Query: 432 AVQALSIVNNSTARILSLF 450
+ + N S +L L
Sbjct: 247 LLSLSTQSNISAWSVLRLL 265
>gi|218457910|ref|ZP_03498001.1| flagellin C protein [Rhizobium etli Kim 5]
Length = 116
Score = 66.3 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/115 (43%), Positives = 72/115 (62%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI S +A LRDIN N+ V Q+ +++G+RV+ AADNA YWSIA ++DN A+SA
Sbjct: 2 SIYQRVSIDAALHVLRDINRNMTVTQNHITTGMRVAKAADNAVYWSIATTARTDNKAVSA 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQS 117
+ DA+G+ ++ + A G+ +DV+S IK K+ A E G D I E+ QLQ
Sbjct: 62 IQDALGMAAATMGTAYTGVQNVVDVVSEIKAKLVAATEDGVDKTKINEELKQLQE 116
>gi|220926682|ref|YP_002501984.1| hypothetical protein Mnod_6936 [Methylobacterium nodulans ORS 2060]
gi|219951289|gb|ACL61681.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 620
Score = 66.3 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 57/138 (41%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
DT + + + + + E A+ ++++ I+T +
Sbjct: 483 NLLAGDTLKINFNEKSTSSLSVTGTNVSAANLGLSAVGQNNFLETNAINKVLTTINTAVS 542
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G+ + + +++F K + + ++ G L +AD+ E+ AL T+ L +
Sbjct: 543 TLKNQASSLGANLAVVQNRQEFTKQIINVLDTGAANLTNADLNEEAANSQALATRNSLGI 602
Query: 434 QALSIVNNSTARILSLFR 451
ALS+ N + +L L R
Sbjct: 603 SALSLANQAQQGVLQLLR 620
Score = 64.4 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 50/117 (42%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SI + + L+D L Q+R+++G +V+ A DN + A + + + L
Sbjct: 1 MSSITLSAATRQNLLSLQDTASLLATTQNRLATGKKVNTALDNPTNFFTADGLTARSSGL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQS 117
+A+ D + G + A G++K + +K+ + + S + S
Sbjct: 61 TALLDGVSNGIQTIQAANTGITKLQGLTDQLKSVAQQALASANAFTAKASIASIALS 117
>gi|145845965|gb|ABP96972.1| flagellin [Cronobacter sakazakii]
Length = 188
Score = 66.3 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 3/100 (3%)
Query: 51 QIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKS 107
M S ++ + G S V A+ +++ + I+ TD S
Sbjct: 1 NRMTSQVKGMTQAARNANDGISLVQTAEGNLNEINTNLQRIRELAVQAANDTNGTTDLAS 60
Query: 108 IQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
I +EITQ S++ IA ++FNG+ L +
Sbjct: 61 INTEITQRLSEIDRIAGSANFNGKKLLDGSATDFNIQVGA 100
>gi|218461115|ref|ZP_03501206.1| flagellin C protein [Rhizobium etli Kim 5]
Length = 215
Score = 66.3 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 57/97 (58%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + EM+S +D + T G++ RI LQ DF + D + G+GRLVDAD
Sbjct: 117 ATTQGQIGEMISVVDAALTQLTTVGSAFGALEKRIELQNDFAAKLHDNITAGIGRLVDAD 176
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
M E+++L ALQTQQQL +Q+L+I N + + LF+
Sbjct: 177 MEEEASKLKALQTQQQLGLQSLNIANATYDTVRQLFQ 213
>gi|331011050|gb|EGH91106.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 215
Score = 66.3 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 68/201 (33%), Gaps = 3/201 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + + N+ + VSSG++++ A+D+ + + N L+
Sbjct: 3 ISTTQFYESTNTNYQRTYSNVLKTSEEVSSGIKLNTASDDPVGAARVLQLAQQNSMLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ IG ++ + ++ ++ +D M T + I + +D + +E+ Q QSQL
Sbjct: 63 ASNIGTINTNIVNSETALTSIVDTMQTAREVIVSAGNGAYTDSDRLAKAAELKQYQSQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ NG+ S+ + D V + D + P +
Sbjct: 123 GLMNSQDSNGQYIFAGSKSSAPPYAQNADGTYSYSGDQTSVNLAIGDGLVLPSNTTGYEA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQ 201
+
Sbjct: 183 FEQAVNTTRTSSTLLSPATDD 203
>gi|27380957|ref|NP_772486.1| flagellin [Bradyrhizobium japonicum USDA 110]
gi|27354123|dbj|BAC51111.1| bll5846 [Bradyrhizobium japonicum USDA 110]
Length = 757
Score = 66.3 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 50/95 (52%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ A +++S ++ + A +GS S + +++DF K + + ++ G L AD
Sbjct: 663 DNAATNKVLSNLNAASSTLRSEASSLGSNLSVVQVRQDFNKSLINVLQTGSSNLTLADTN 722
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+E+ AL T+Q +AV ALS+ N S +L L R
Sbjct: 723 TEAANSQALSTRQSIAVSALSLANQSQQSVLQLLR 757
Score = 60.5 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 46/110 (41%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ + S L+ L Q+R+S+G V+ A DN + AQ + + +
Sbjct: 1 MSGIVLSASVRQNLLSLQSTADLLATTQNRLSTGKSVNSALDNPTNFFTAQSLDNRASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS 110
+ + D I G + A G++ ++ + K+ ++ + +
Sbjct: 61 NNLLDGIANGVQVLQAANTGITSLQKLIDSAKSIANQALQTTVGYSTKSN 110
>gi|22676860|gb|AAL99375.1| flagellin [Borrelia burgdorferi]
gi|22676862|gb|AAL99376.1| flagellin [Borrelia burgdorferi]
Length = 207
Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/199 (10%), Positives = 54/199 (27%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + A T+ G + + A+ S N +
Sbjct: 9 QYNQMHMLSNKSAAQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 68
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T T + + + +
Sbjct: 69 IYAANVANLFSGEGAQTAQATPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 128
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E +
Sbjct: 129 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAAT 188
Query: 424 ALQTQQQLAVQALSIVNNS 442
Q A+ ++ N
Sbjct: 189 TNSILTQSAMAMIAQANQV 207
>gi|82702460|ref|YP_412026.1| flagellar hook-associated protein FlgL [Nitrosospira multiformis
ATCC 25196]
gi|82410525|gb|ABB74634.1| Flagellin-like protein [Nitrosospira multiformis ATCC 25196]
Length = 311
Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 17/147 (11%), Positives = 49/147 (33%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ +N S + + +++S+G V + N A + A + + A S
Sbjct: 3 VSSNTSYEAGLAAIHRQQSAQMKTFEQISTGRSVLTPSANPAAYVRALDVAEADSANSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ G + + + + + ++ + A + ++I +E+ +L
Sbjct: 63 ALNRQNGMASLSMLEDTLGGITALLQRAQELTVAAGNGTLNDSGRETIATELRTSLGELL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
++ +G+ S+
Sbjct: 123 GLSNRKDASGQYLFSGYQSSTKPFEDT 149
Score = 39.7 bits (90), Expect = 0.94, Method: Composition-based stats.
Identities = 8/78 (10%), Positives = 24/78 (30%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ + + +G+ I + + + ++ + L D D
Sbjct: 220 ATGLGSAQVNLSNALDNVLKVQASVGTRMKEIDALNERGEDLNIQYKQQLSELRDVDYVE 279
Query: 418 ESTRLSALQTQQQLAVQA 435
+ L+ +T + +A
Sbjct: 280 AISDLTQQRTYLEATQKA 297
>gi|27380955|ref|NP_772484.1| flagellin [Bradyrhizobium japonicum USDA 110]
gi|27354121|dbj|BAC51109.1| bll5844 [Bradyrhizobium japonicum USDA 110]
Length = 757
Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ A +++ ++ + A +GS S + +++DF K + + ++ G L AD
Sbjct: 663 DNAAANRVLTNLNAASSTLRSEASSLGSNLSVVQIRQDFNKNLINVLQTGSSNLTLADTN 722
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV ALS+ N S +L L R
Sbjct: 723 VEAANSQALSTRQSIAVSALSLANQSQQSVLQLLR 757
Score = 61.7 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 47/110 (42%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ + S L+ L Q+R+S+G V+ A DN + AQ + + +
Sbjct: 1 MSGIVLSASVRQNLLSLQSTADLLATTQNRLSTGKSVNSALDNPTNFFTAQSLDNRASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS 110
+ + D+I G + A G++ ++ + K+ ++ + +
Sbjct: 61 NNLLDSIANGVQVLQAANTGLTSLQKLIDSAKSIANQALQTTVGYSTKSN 110
>gi|294084411|ref|YP_003551169.1| flagellin, N-terminal [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663984|gb|ADE39085.1| Flagellin, N-terminal [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 300
Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 59/164 (35%), Gaps = 3/164 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + I ++ Q R++SG ++ ++D+ + K L
Sbjct: 3 ISTKTFNAQSLAGFHKITGQIQEAQMRIASGKKILRSSDSPIAATNISAAKEQKVLLDRF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLR 120
S + ++ + + +A+ VM+ I V D +SI++EI +L+ +
Sbjct: 63 SSNLDRAQYRLALTDQTLGQAVTVMTRIFELSIQAVNDTYSSADRQSIKAEIGELKKGMV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQIT 164
++A G++ +S A D G +
Sbjct: 123 ELANKKDLTGQSLFAGYKVNSNAFEIDKDGVVQFVGDRGTHDVQ 166
Score = 46.7 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ I I+ T IG+ S+ +Q D + + + + + L DAD+AS T + +
Sbjct: 216 LDDISKAIEHITRQQTLIGAQLSKADMQADALGQRKLLLNENISDLEDADIASIVTEMQS 275
Query: 425 LQTQQQLAVQA 435
+ T + A QA
Sbjct: 276 MITSRDAAQQA 286
>gi|146341920|ref|YP_001206968.1| putative flagellin protein, C-terminus [Bradyrhizobium sp. ORS278]
gi|146194726|emb|CAL78751.1| Putative flagellin protein, C-terminus [Bradyrhizobium sp. ORS278]
Length = 524
Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/325 (15%), Positives = 104/325 (32%)
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
D + ++ SV G I G Q T+ + L S
Sbjct: 200 DTVNNLLAAIDSVTGASATPSSVSGGKIVIATGTAQDLTLGGTALAKLGLGSVSPVSRNP 259
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
L + I + AS + + A + + + T
Sbjct: 260 PALTGQTLTIASTGGGVATNITFGTGASQISTLAQLNTALAANNLQASLSTTGQLTILTT 319
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
A ++T+ + + + + + A N +
Sbjct: 320 NEAASSTIGTVAGSSTAASQAFNGVTASTPVADTNSQTTRAGLIAQYNNVLAQINTTAQD 379
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
N + T ++ + ++ L ++ + + + ++++
Sbjct: 380 ASFNGINLLNGDTLKLTFNETGRSTLNITGVTFNSTGLGLSSLVVGTDFLDSNSANKVLT 439
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+++ + A +GS S + +++DF K + + ++ G L AD E+ AL
Sbjct: 440 TLNSASTAIRSEASSLGSNLSIVQIRQDFNKNLINVLQTGSSNLTLADTNEEAANSQALS 499
Query: 427 TQQQLAVQALSIVNNSTARILSLFR 451
T+Q +AV AL++ N S A +L L R
Sbjct: 500 TRQSIAVSALALANQSQASVLQLLR 524
Score = 54.0 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 52/114 (45%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ + S L++ L Q+ +++G +V+ A DN + AQ + + +
Sbjct: 1 MSGIVLSASVRQNLLALQNTASLLATTQNNLATGNKVNTALDNPTEFFTAQSLNNRASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQ 114
+ + D+IG G + A G++ ++ + K+ + ++ T + S +
Sbjct: 61 ANLLDSIGNGVQVLQAANTGLTSLQKLVDSAKSIASQVLQAPTGYTTKSSITSA 114
>gi|89214340|gb|ABD64482.1| flagellin [Bacillus thuringiensis serovar huazhongensis]
Length = 195
Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/195 (9%), Positives = 54/195 (27%)
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+A G+ A + T + + + + A +
Sbjct: 1 MHARASGMRAAIRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSANGTNSNANRHSLN 60
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
T T + + + L + + + + +
Sbjct: 61 KEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDDIGHTVNMTKHIPPSPTQHDIKIST 120
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ + I+ ++ + +G++ +R+ + + A+ + DADMA
Sbjct: 121 EQEARAAILKIEEALQSVSFHRADLGAMINRLQFNIENLNNQSMALTDAASLIEDADMAQ 180
Query: 418 ESTRLSALQTQQQLA 432
E + + ++A
Sbjct: 181 EMSDFLKFKLLTEVA 195
Score = 59.8 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 31/120 (25%), Gaps = 3/120 (2%)
Query: 53 MKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQ 109
M + + A S + A+A + +++ +++ + S+
Sbjct: 1 MHARASGMRAAIRNNEDAISMLRTAEAALQTVTNILQRMRDLAVQSANGTNSNANRHSLN 60
Query: 110 SEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
E L Q+ I + FN + T + Q
Sbjct: 61 KEFQSLTEQIGYIGETTEFNDLSVFDGQNRPITLDDIGHTVNMTKHIPPSPTQHDIKIST 120
>gi|302874577|ref|YP_003843210.1| flagellar hook-associated protein 3 [Clostridium cellulovorans
743B]
gi|307690812|ref|ZP_07633258.1| flagellar hook-associated protein 3 [Clostridium cellulovorans
743B]
gi|302577434|gb|ADL51446.1| flagellar hook-associated protein 3 [Clostridium cellulovorans
743B]
Length = 321
Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/295 (13%), Positives = 81/295 (27%), Gaps = 2/295 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + L + N+ VQ+++S+G + S +DN + + + SD +
Sbjct: 3 ITNKMMSNKYLFNLNNNLNNMTKVQNQLSTGKQFSKPSDNPLKVAKSMQIDSDISSNEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I ++ +D+ ++ DV+ + + K+ + S + +L ++ A
Sbjct: 63 KANIQGTTNYLDVVDTTLATLNDVLVSFEEKLVSAGNAAYGSDERNAINQELNEKVAHFA 122
Query: 124 R--GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ +SF G G+ T T +
Sbjct: 123 QALNTSFQGTYVFGGTRGTDKPVKTVVDANGQYTIQYANSDGTDNPITATEMTQVSSKYK 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ ++ N +V D I L N T Q
Sbjct: 183 VEVSQGVTMEYNTTAPEILNFNGGTTNNVMDLFKNILNNLNSSDPADINKLTTENLTDIQ 242
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
A + S S +K ++ + D+
Sbjct: 243 AAHNNILKARSTVGAMQNRMDSALSKNKDETLNLKEILSSNEDVDVAETTMQYAM 297
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/189 (12%), Positives = 58/189 (30%)
Query: 246 ATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTN 305
A L + GT G+ P + T ++ +
Sbjct: 119 AHFAQALNTSFQGTYVFGGTRGTDKPVKTVVDANGQYTIQYANSDGTDNPITATEMTQVS 178
Query: 306 STVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMV 365
S + ++ +T + ++ + + ++D + E +
Sbjct: 179 SKYKVEVSQGVTMEYNTTAPEILNFNGGTTNNVMDLFKNILNNLNSSDPADINKLTTENL 238
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ I A +G++ +R+ K +++ + D D+A + + + L
Sbjct: 239 TDIQAAHNNILKARSTVGAMQNRMDSALSKNKDETLNLKEILSSNEDVDVAETTMQYAML 298
Query: 426 QTQQQLAVQ 434
QT A+Q
Sbjct: 299 QTTYIAALQ 307
>gi|88858113|ref|ZP_01132755.1| Flagellin, C-terminal:Flagellin, N-terminal [Pseudoalteromonas
tunicata D2]
gi|88819730|gb|EAR29543.1| Flagellin, C-terminal:Flagellin, N-terminal [Pseudoalteromonas
tunicata D2]
Length = 251
Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 51/127 (40%), Gaps = 3/127 (2%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
L + Q ++SSG +++ A D+AA ++ + + L + S
Sbjct: 10 THLTTQLDKVTSSQQKISSGFKINAAKDDAAGLQLSNRLLTQLNNLDNQARNTNDVISYY 69
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLRDIARGSSFNGE 131
+A++G S +V I A D +I EI+ L Q+ I+ ++F G+
Sbjct: 70 QVAQSGFSGLTEVAGRINELSIAAGNGSLDAAGRAAIAQEISGLGEQISLISAQTTFGGQ 129
Query: 132 NWLRTDL 138
+D
Sbjct: 130 PIFSSDS 136
Score = 42.8 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 12/131 (9%), Positives = 44/131 (33%)
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ TT + + ++ ++ + + ++ + + +A+
Sbjct: 121 SAQTTFGGQPIFSSDSQLVGNLGFDPSAQNFTNSDLSSASGAQSVIMQSEQYLTNLNSAS 180
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ + + A + + D D A++ + + Q + A+ +
Sbjct: 181 AAVGALQQQQLSDLSVQSSQKIANSTSLSAIKDTDFAAQISEYLKNKMQVEAAMSLKAQA 240
Query: 440 NNSTARILSLF 450
N ++ + L
Sbjct: 241 NLTSDVVKHLL 251
>gi|148259128|ref|YP_001233255.1| flagellin domain-containing protein [Acidiphilium cryptum JF-5]
gi|326402281|ref|YP_004282362.1| flagellin [Acidiphilium multivorum AIU301]
gi|146400809|gb|ABQ29336.1| flagellin domain protein [Acidiphilium cryptum JF-5]
gi|325049142|dbj|BAJ79480.1| flagellin [Acidiphilium multivorum AIU301]
Length = 294
Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 62/121 (51%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+SI+TN +AM + L IN +L VQ+++S+G VS A DN A +++AQ ++++ L+
Sbjct: 6 SSIITNSAAMVGVETLNSINTSLNNVQNQISTGYSVSSAVDNGAAFAVAQSVRTNMAGLT 65
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
A + +G + ++ ++M ++ + + + Q SQL++
Sbjct: 66 AANQQLGDTQGLLATTNTALTNISNLMQSMDATLVNLSSSTISTSQKSQYVAQFSSQLQN 125
Query: 122 I 122
+
Sbjct: 126 L 126
Score = 44.3 bits (102), Expect = 0.039, Method: Composition-based stats.
Identities = 44/292 (15%), Positives = 85/292 (29%)
Query: 159 GKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
G V + L+S ++
Sbjct: 3 GVVSSIITNSAAMVGVETLNSINTSLNNVQNQISTGYSVSSAVDNGAAFAVAQSVRTNMA 62
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
A + ++T TS S+
Sbjct: 63 GLTAANQQLGDTQGLLATTNTALTNISNLMQSMDATLVNLSSSTISTSQKSQYVAQFSSQ 122
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
+ K I + G S+ + + V ++++ +
Sbjct: 123 LQNLQYYIKGASYNGKALIGASSGTLASSSSSFTSKALQVSSDASGGQIKIAAQSMTTVY 182
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
++ + + + TQ+ + G++++++ Q + +
Sbjct: 183 LALSKIGTSLGTASAGSTTITNWMTAGGTFSTQVSNVGSYLNTYGNLTNQVDAQITYNQN 242
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
DA+ G+G LVDA+MA+ES +L +LQ QQQLA ALSI N + + L
Sbjct: 243 KMDALSNGLGALVDANMAAESAKLQSLQIQQQLATSALSIANQQPSILTKLI 294
>gi|27380956|ref|NP_772485.1| flagellin [Bradyrhizobium japonicum USDA 110]
gi|27354122|dbj|BAC51110.1| bll5845 [Bradyrhizobium japonicum USDA 110]
Length = 757
Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 50/95 (52%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ A ++++ +++ + A +GS + + +++DF K + + ++ G L AD
Sbjct: 663 DNAATNKVLTNLNSASSTLRSEASSLGSNLTIVQVRQDFNKNLINVLQTGSSNLTLADTN 722
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV ALS+ N S +L L R
Sbjct: 723 VEAANSQALSTRQSIAVSALSLANQSQQSVLQLLR 757
Score = 60.1 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 45/110 (40%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ + S L+ L Q R+S+G V+ A DN + AQ + + +
Sbjct: 1 MSGIVLSSSVRQNLLSLQSTADLLATTQSRLSTGKSVNSALDNPTNFFTAQSLDNRASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS 110
+ + D I G + A G++ ++ + K+ ++ + +
Sbjct: 61 NNLLDGIANGVQVLQAANTGITSLQKLIDSAKSIANQALQTTVGYSTKSN 110
>gi|238751790|ref|ZP_04613278.1| Flagellin 1 [Yersinia rohdei ATCC 43380]
gi|238710061|gb|EEQ02291.1| Flagellin 1 [Yersinia rohdei ATCC 43380]
Length = 63
Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SAV 63
+
Sbjct: 61 TVA 63
>gi|154250226|ref|YP_001411051.1| flagellin domain-containing protein [Fervidobacterium nodosum
Rt17-B1]
gi|154154162|gb|ABS61394.1| flagellin domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 267
Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 36/95 (37%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
N + + ID I + IGS+++R+ + + V L DM
Sbjct: 172 NSTENAQNALKAIDQAISNVSTTRNYIGSVNNRLESAARNLSETMINLTSSVSILTGTDM 231
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A + Q Q + + LS N +++ +L L
Sbjct: 232 ARTTMEWIRTQLQSRATIGVLSQSNVNSSNVLRLL 266
Score = 53.6 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 16/212 (7%), Positives = 66/212 (31%), Gaps = 3/212 (1%)
Query: 49 IAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDS 105
IA+ ++S + ++ A+ G+ + ++ ++
Sbjct: 45 IAERIRSQVNGYREAMVSTYNTIGMMNTAEGGLQSISSNLQRMRELAIQASNGTLSDSER 104
Query: 106 KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT 165
++Q E TQL + + + +N + L ++ + + + + +
Sbjct: 105 SALQKEFTQLSQGINKVVEQTKYNNQRVLGGEIRNMQVQLGPNEGQNMKVTLPSMDIKSL 164
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
++ + + + + + V ++ + + S T+ ++
Sbjct: 165 GLESVNLNSTENAQNALKAIDQAISNVSTTRNYIGSVNNRLESAARNLSETMINLTSSVS 224
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+G + + + + + + + +
Sbjct: 225 ILTGTDMARTTMEWIRTQLQSRATIGVLSQSN 256
>gi|266621928|ref|ZP_06114863.1| putative FgL, flagellar protein [Clostridium hathewayi DSM 13479]
gi|288866401|gb|EFC98699.1| putative FgL, flagellar protein [Clostridium hathewayi DSM 13479]
Length = 327
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/167 (10%), Positives = 55/167 (32%), Gaps = 2/167 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N ++ L+ NL +++S + + +++ A + A ++
Sbjct: 3 ITENMMTAMYNRNLQRNVANLASSNLKLTSQRQYNHVSEDPAAAAKAFTVRDQIARSEEH 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG--VERGTDSKSIQSEITQLQSQLRD 121
+ + ++D A + ++ ++ T+ K T + +I E+ L+ ++
Sbjct: 63 INTVKNAVGELDTADSNIATINSILETVFEKATRAGGASSQDNLDAIAEELGGLKEEILQ 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
+ + + G + ++ F +
Sbjct: 123 TMNARYGDKFLFSGSANGEAPFTLDAEGNLLFNGKAVDAYKPDDPAT 169
>gi|4760527|dbj|BAA77324.1| flagellin [Pseudomonas putida]
gi|4760529|dbj|BAA77325.1| flagellin [Pseudomonas putida]
Length = 200
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 53/179 (29%), Gaps = 3/179 (1%)
Query: 44 AAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVE 100
AA IA M S + G S A+ M + +++ ++
Sbjct: 1 AAGLQIATRMTSQIRGQTMAIKNANDGISIAQTAEGAMQEQTNILQRMRELAVQSRNDSN 60
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
D ++ E + S+L IA + NG+N L T + + + +
Sbjct: 61 STNDRVALDKEFQSMASELTRIANSTQLNGKNLLDGSASVMTFQVGSNTGSANQITIDLS 120
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
+ T D + + S T E + + + + ST
Sbjct: 121 AKFTASDLGVTSSINIQGSDTTTAEANFSAAVSAIDAALQTINSNRADLGATQNRLTST 179
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 36/100 (36%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ V + + + + + + + +D + VS ID ++
Sbjct: 101 MTFQVGSNTGSANQITIDLSAKFTASDLGVTSSINIQGSDTTTAEANFSAAVSAIDAALQ 160
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ +G+ +R+ + ++ + + E GR+ DA
Sbjct: 161 TINSNRADLGATQNRLTSTINNLQNINEYAEAARGRVQDA 200
>gi|83814195|ref|YP_446734.1| flagellar hook-associated protein 3 [Salinibacter ruber DSM 13855]
gi|83755589|gb|ABC43702.1| flagellar hook-associated protein 3 [Salinibacter ruber DSM 13855]
Length = 319
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 62/150 (41%), Gaps = 5/150 (3%)
Query: 3 SILTNHS--AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
SI TN S + S ++ + ++ +++++SSG R++ +D+ + ++ A+ MK+ L
Sbjct: 5 SIATNSSVYSGVISDEVPRLQRDISRLREQISSGKRINRPSDDPSSFATAERMKTLGNQL 64
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQS 117
+ ++I + VD + + D+ + + + D +I E+ ++
Sbjct: 65 ARREESIASARTFVDRTQQELDGLADLFTKAREDGVRAADDTRSADDRAAIAEELRSIKG 124
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAK 147
++ D + + +
Sbjct: 125 EVVDRMNSTQGGEYIFAGNRTDTQPFGADG 154
Score = 53.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 33/81 (40%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ ++ + + + G+I R+ ++ ++ + D D+A+ + L
Sbjct: 234 TALGEVEDALDHVISKGSEAGAIGRRLSTAQEQVEAASLEANERRSDAEDTDLATAISEL 293
Query: 423 SALQTQQQLAVQALSIVNNST 443
QTQ Q A QA S ++
Sbjct: 294 QQRQTQLQAAFQATSSSQQTS 314
>gi|4760487|dbj|BAA77304.1| flagellin [Pseudomonas putida]
Length = 165
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/163 (14%), Positives = 49/163 (30%), Gaps = 3/163 (1%)
Query: 44 AAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE--- 100
AA IA + S L + G S A+ M + D++ ++ +
Sbjct: 1 AAGLQIANRLTSQINGLGQAVKNVNDGISIAQTAEGAMQASTDILQKMRTLALSSATGSL 60
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
D KS E L S+L I++ ++F G+ L G+ + + + +
Sbjct: 61 SNDDRKSNNDEYQALTSELTRISQTTTFGGQKLLDGSFGTKAIQVGANANETINVSLDNV 120
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
+ + +S + +
Sbjct: 121 AANQIGSQQVKSSAIAPSASGLAAGAMTVTGNGQSTAISYNAG 163
>gi|28869149|ref|NP_791768.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
tomato str. DC3000]
gi|28852389|gb|AAO55463.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 530
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/361 (10%), Positives = 95/361 (26%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + + N+ D V+SG++++ A+D+ + + N L+
Sbjct: 3 ISTTQFFESTNANYQRNYANVIKTGDEVTSGIKLNTASDDPVGAARVLQLAQQNSMLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ IG ++ + ++ ++ +D M + + + ++ +L+ I
Sbjct: 63 ASNIGTINTNIVNSETALTSIVDTMQAAREVVVSAGNGAYTDSDRLAKAAELKQYQSQIL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ N GS +++ + +G + + +
Sbjct: 123 GLMNSQDANGQYIFAGSKSSAPPYAQNADGTYSYSGDQTSVNLAIGDGLVLPSNTTGHEA 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
E+ R + P + S + + T +
Sbjct: 183 FEQAVNTTRTSSTLLSPATDDGKVGLTGGQVKSTSAYNAGYQAGEPYTMTFLSGTQFKIT 242
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
V A+ A + S T ++ A T + ++ Y
Sbjct: 243 DATGTDVTTDASSAGKFNYASFSDQTFTFRGVELTMNVNLSAAESATAATAATALTNRSY 302
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
++ + S S + + A +
Sbjct: 303 ELASTPDTVSASRSPGNTSAATISSSAVGNTTADRTAFNNTFPPNGAILKFTSATAYDLY 362
Query: 364 M 364
Sbjct: 363 A 363
Score = 39.0 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 55/455 (12%), Positives = 122/455 (26%), Gaps = 21/455 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRV-SSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I TN +++ L I ++ ++ V S+G +D A + + +S L
Sbjct: 68 TINTNI--VNSETALTSIVDTMQAAREVVVSAGNGAYTDSDRLAKAAELKQYQSQILGLM 125
Query: 62 AVSDAIGL---------GSSKVDIAKAGM----SKAIDVMSTIKNKITAGVERGTDSKSI 108
DA G A + ++ + G ++
Sbjct: 126 NSQDANGQYIFAGSKSSAPPYAQNADGTYSYSGDQTSVNLAIGDGLVLPSNTTGHEAFEQ 185
Query: 109 QSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
T+ S L A G + S+ + ++ + +G T
Sbjct: 186 AVNTTRTSSTLLSPATDDGKVGLTGGQVKSTSAYNAGYQAGEPYTMTFLSGTQFKITDAT 245
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
D T + + + + A+ + + +
Sbjct: 246 GTDVTTDASSAGKFNYASFSDQTFTFRGVELTMNVNLSAAESATAATAATALTNRSYELA 305
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
+ + ATI A T + + ++ +
Sbjct: 306 STPDTVSASRSPGNTSAATISSSAVGNTTADRTAFNNTFPPNGAILKFTSATAYDLYASP 365
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL-----DSRKDLPKEIDSGYSMVT 343
V +++K + + + + V T + + +
Sbjct: 366 VTSSSKPVSSGTLTGSTANASGVNFTVSGTPAAGDQFVVESGTHQTENILNTLTAAIKAL 425
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
T + A+ + I + I A+ A G+ Q +L++
Sbjct: 426 STPTDGNLVASQKLDAALGSALGNISSSIDQASTARSAGGARQLAATAQGTTNELLKGNN 485
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
G V+AD+ +TRL+ +T + Q
Sbjct: 486 TVEQGTYVNADIVEATTRLTLQKTMLDASQQVFVQ 520
>gi|260767930|ref|ZP_05876864.1| flagellar hook-associated protein FlgL [Vibrio furnissii CIP
102972]
gi|260615960|gb|EEX41145.1| flagellar hook-associated protein FlgL [Vibrio furnissii CIP
102972]
gi|315179633|gb|ADT86547.1| flagellar hook-associated protein L [Vibrio furnissii NCTC 11218]
Length = 299
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 55/143 (38%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + Q L+ N L V ++S+G R++ +D+ + + A+
Sbjct: 3 ISDTQFSQMMLQSLQLNNAGLGKVMQQMSTGDRLTKLSDDPMASIKLLNLDREGSAIEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + + +I+ ++ G + + +T+L+S IA
Sbjct: 63 QANIANVKTTLSSQEVYLDSVNESLKSIRERVLWGANGTMTTDDREGIVTELKSLRDSIA 122
Query: 124 RGSSFNGENWLRTDLGSSTASIA 146
+ E G++T++ A
Sbjct: 123 SSFNAQDEEGHFLFSGTATSTAA 145
>gi|86750923|ref|YP_487419.1| flagellin [Rhodopseudomonas palustris HaA2]
gi|86573951|gb|ABD08508.1| Protein of unknown function DUF1522 [Rhodopseudomonas palustris
HaA2]
Length = 888
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 49/105 (46%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ A+ + + A +++ + + + GS S + ++DF K + + ++ G
Sbjct: 784 STLASGTDFIDNNATNSVLTKLSAASTALRSQSSAFGSNLSIVQARQDFSKSLINVLQTG 843
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L AD E+ AL T+Q +AV ALS+ N S +L L R
Sbjct: 844 SSNLTLADTNEEAANSQALTTRQSIAVSALSLANQSQQSVLQLLR 888
Score = 63.2 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 47/110 (42%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ +++ L+ L Q R+SSG +V+ A DN + A + + +
Sbjct: 1 MSGIVLSNAVRQNLSSLQATADLLATTQSRLSSGKKVNSALDNPTNFFTAASLDARASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS 110
+ + D I G + A G++ ++ + K+ ++ + + +
Sbjct: 61 NNLLDGISSGVQILQAANTGITSLTKLVDSAKSIANQALQTTSGYATKSN 110
>gi|39936990|ref|NP_949266.1| flagellin [Rhodopseudomonas palustris CGA009]
gi|192292818|ref|YP_001993423.1| flagellin [Rhodopseudomonas palustris TIE-1]
gi|39650847|emb|CAE29370.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
gi|192286567|gb|ACF02948.1| protein of unknown function DUF1522 [Rhodopseudomonas palustris
TIE-1]
Length = 888
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 50/105 (47%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ ++ + + A ++S + T + A GS S + ++DF K + + ++ G
Sbjct: 784 SNLSSGVDFIDNNATNAVLSKLSTASTALRSQASAFGSNLSIVQARQDFSKSLINVLQTG 843
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L AD E+ AL T+Q +AV ALS+ N S +L L R
Sbjct: 844 SSNLTLADTNEEAANSQALTTRQSIAVSALSLANQSQQGVLQLLR 888
Score = 63.2 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 38/272 (13%), Positives = 87/272 (31%), Gaps = 1/272 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ +++ L+ L Q R+SSG +V+ A DN + A + S +
Sbjct: 1 MSGIVLSNAVRQNLSSLQATADLLATTQSRLSSGKKVNTALDNPTNFFTAASLDSRASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ-SQL 119
+ + D IG G + A G++ ++ + K+ ++ + + + + +
Sbjct: 61 NNLLDGIGNGVQILQAANTGITSLNKLVDSAKSIANQALQTTSGYATKSNVSATISGATA 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
D+ S++ + TA + + G+
Sbjct: 121 DDLRGTQSYSNAVATGNVIFDGTAGGSTAASGTDTLGGAIVSIAAGTAVTALGAADNTAL 180
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ + + + A+G T K T + A + ++
Sbjct: 181 GSVLSVGTAAATAGGSNLISDLTNGSTTTATGPAAGDSITVNGKTITFTTAGAASKDSNG 240
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
+ G+ L N +G S + +
Sbjct: 241 NYTIGLDQTLTKLANTIDDINGNTGHSSTITA 272
>gi|331017017|gb|EGH97073.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 530
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/361 (10%), Positives = 95/361 (26%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + + N+ D V+SG++++ A+D+ + + N L+
Sbjct: 3 ISTTQFFESTNANYQRNYANVIKTGDEVTSGIKLNTASDDPVGAARVLQLAQQNSMLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ IG ++ + ++ ++ +D M + + + ++ +L+ I
Sbjct: 63 ASNIGTINTNIVNSETALTSIVDTMQAAREVVVSAGNGAYTDSDRLAKAAELKQYQSQIL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ N GS +++ + +G + + +
Sbjct: 123 GLMNSQDANGQYIFAGSKSSAPPYAQNADGTYSYSGDQTSVNLAIGDGLVLPSNTTGHEA 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
E+ R + P + S + + T +
Sbjct: 183 FEQAVNTTRTSSTLLSPATDDGKVGLTGGEVKSTSAYNAGYQAGEPYTMTFLSGTQFKIT 242
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
V A+ A + S T ++ A T + ++ Y
Sbjct: 243 DATGTDVTTDASSAGKFNYASFSDQTFTFRGVELTMNVNLSAAESATAATAATALTNRSY 302
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
++ + S S + + A +
Sbjct: 303 ELASTPDTVSASRSPGNTSAATISSSAVGNTTADRTAFNNTFPPNGAILKFTSATAYDLY 362
Query: 364 M 364
Sbjct: 363 A 363
Score = 39.3 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 55/455 (12%), Positives = 121/455 (26%), Gaps = 21/455 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRV-SSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I TN +++ L I ++ ++ V S+G +D A + + +S L
Sbjct: 68 TINTNI--VNSETALTSIVDTMQAAREVVVSAGNGAYTDSDRLAKAAELKQYQSQILGLM 125
Query: 62 AVSDAIGL---------GSSKVDIAKAGM----SKAIDVMSTIKNKITAGVERGTDSKSI 108
DA G A + ++ + G ++
Sbjct: 126 NSQDANGQYIFAGSKSSAPPYAQNADGTYSYSGDQTSVNLAIGDGLVLPSNTTGHEAFEQ 185
Query: 109 QSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
T+ S L A G S+ + ++ + +G T
Sbjct: 186 AVNTTRTSSTLLSPATDDGKVGLTGGEVKSTSAYNAGYQAGEPYTMTFLSGTQFKITDAT 245
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
D T + + + + A+ + + +
Sbjct: 246 GTDVTTDASSAGKFNYASFSDQTFTFRGVELTMNVNLSAAESATAATAATALTNRSYELA 305
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
+ + ATI A T + + ++ +
Sbjct: 306 STPDTVSASRSPGNTSAATISSSAVGNTTADRTAFNNTFPPNGAILKFTSATAYDLYASP 365
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL-----DSRKDLPKEIDSGYSMVT 343
V +++K + + + + V T + + +
Sbjct: 366 VTSSSKPVSSGTLTGSTANASGVNFTVSGTPAAGDQFVVESGTHQTENILNTLTAAIKAL 425
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
T + A+ + I + I A+ A G+ Q +L++
Sbjct: 426 STPTDGNLVASQKLDAALGSALGNISSSIDQASTARSAGGARQLAATAQGTTNELLKGNN 485
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
G V+AD+ +TRL+ +T + Q
Sbjct: 486 TVEQGTYVNADIVEATTRLTLQKTMLDASQQVFVQ 520
>gi|240006897|gb|ACS38123.1| conserved hypothetical protein, putative flagellin protein
(fragment) [Methylobacterium extorquens AM1]
Length = 413
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+SI + + L+D Q R+++G +V+ A DN + AQ + + ALS
Sbjct: 32 SSITLSAATRQNLLSLQDTAGLAATNQGRLATGRKVNSALDNPVNYFTAQSLSDRSSALS 91
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG 102
+ D I G + A G SK D++ ++++ I
Sbjct: 92 GLLDGISNGIQTIQAANTGASKIADLVKSLQSTIAQAQSDA 132
>gi|238753235|ref|ZP_04614654.1| Flagellin 1 [Yersinia rohdei ATCC 43380]
gi|238708547|gb|EEQ00846.1| Flagellin 1 [Yersinia rohdei ATCC 43380]
Length = 62
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ L +L +R+SSGLR++ A D+AA +IA S+ L
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNINGL 60
Query: 61 SA 62
+
Sbjct: 61 TV 62
>gi|307731355|ref|YP_003908579.1| flagellar hook-associated protein 3 [Burkholderia sp. CCGE1003]
gi|307585890|gb|ADN59288.1| flagellar hook-associated protein 3 [Burkholderia sp. CCGE1003]
Length = 407
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/335 (13%), Positives = 100/335 (29%), Gaps = 3/335 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + D L + ++SSG+ +S +DN + A + S +L+
Sbjct: 3 ISSTQYFTMNVATMSDQQAQLSQLYAQISSGVSLSTPSDNPLGAAQAVQLSSTATSLAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ + + + + + +V+ +I + G D SI +E+ L+SQL
Sbjct: 63 TSNQNTALASLQLEDSTLGSVNNVLQSIHTLVLRAGDGSLNNGDRGSIATELQSLRSQLM 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G S+ S D G + + ++ S
Sbjct: 123 TLANATDPQGNYLFAGYQSSAQPYNTNSAGVVTYSGDTGTPAVQITNSHVVQTGDNGISI 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G VS+ + + + + + TS +
Sbjct: 183 FGSVAPIGTSAVPAATAGNTGTGVISTVSLNNPTDPTNADTYSINFTSSTTYTVSQTDPA 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ P A A + S +P+ S + + V A I++
Sbjct: 243 TGTVTTSGPQAFTAGSAITLGGQSVTISGAPNAGDSFSVTPATQGSMDVFANLSQLISTL 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
+ + V + + ++ ++
Sbjct: 303 QSPISGGASTASFQSALVTSMTQLENTMNNVVTAQ 337
>gi|34498333|ref|NP_902548.1| flagellar hook-associated protein 3 [Chromobacterium violaceum ATCC
12472]
gi|34104187|gb|AAQ60546.1| flagellar hook-associated protein 3 [Chromobacterium violaceum ATCC
12472]
Length = 309
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/200 (13%), Positives = 66/200 (33%), Gaps = 3/200 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +N S + + +L + ++ +G RV AD+ + +++ S +G +
Sbjct: 3 ISSNTLYQSGVNNMSALQSDLLQLNMQIDTGKRVVTPADDPVAAARIELLNSSSGQNTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
SS + ++ + + +++M +K++ T + +Q + + S+L
Sbjct: 63 GKNTQAVSSWLSLSDSTLQNVVNLMGAMKSQAIYANNSSLSPTQLQQLQKTVAEGISELT 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A + NG + ++ + NG ++ + D
Sbjct: 123 GYANATDGNGNFLFSGNAVTTAPFSVNMNASPPVTTYNGDNGQRSVQVSASRTMTISDPG 182
Query: 181 TDGTERYGLLDRNHKIKVEP 200
G +
Sbjct: 183 NVVFGIPGGSPTATFDALAN 202
Score = 44.0 bits (101), Expect = 0.055, Method: Composition-based stats.
Identities = 25/187 (13%), Positives = 57/187 (30%), Gaps = 5/187 (2%)
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
G + + + + + + V +T+ G +V + ++
Sbjct: 123 GYANATDGNGNFLFSGNAVTTAPFSVNMNASPPVTTYNGDNGQRSVQVSASRTMTISDPG 182
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
+ + ++ L N N + +++ I + + A +G
Sbjct: 183 NVVFGIPGGSPTATFDALANLYDLLGQNPKPANFPSQISTIINQISNATQQLSIAQASVG 242
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
S + + +G L + DMA + + QT Q + + V+
Sbjct: 243 SREQENETLQGMSGSLDLQYNSAIGDLQNVDMAKAISNFTLTQTSLQYTQKTYAQVSQ-- 300
Query: 444 ARILSLF 450
LSLF
Sbjct: 301 ---LSLF 304
>gi|90422999|ref|YP_531369.1| flagellin [Rhodopseudomonas palustris BisB18]
gi|90105013|gb|ABD87050.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 735
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 84/283 (29%), Gaps = 4/283 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I + S L+ L Q R+S+G +V+ A DN + A + + +
Sbjct: 1 MSGITLSSSVRQNLLSLQSTAELLSSTQSRLSTGKKVNSALDNPTNFFTASGLDARASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER----GTDSKSIQSEITQLQ 116
+ + D IG G + A G++ ++ + K+ ++ + S +
Sbjct: 61 NNLLDGIGNGVQILQAANTGITSLQKLVDSAKSIANQALQTVAGYTSKSSVSTTIGGATA 120
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
LR A S+ + ++ D ++ I+ + + +T + +
Sbjct: 121 DDLRGTATYSNGSAQSLALQDGQAAAGVISGATLLGGTAATKTGATVTGLATTTLLSALG 180
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
+ G + + + ++ K +
Sbjct: 181 TNKPVAGNSLTVNGHTVTFANGDAPASTTLPAGSGVNNQLVTDGKGNSTVYLNSGTVQDV 240
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
A N++ + + ++ S +
Sbjct: 241 MNAIDLASGVQNATITGGAATVANSSGANASIAANALVFSTST 283
Score = 62.1 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ A +GS S + ++DF K + + ++ G L AD E+ AL T+Q +AV A
Sbjct: 660 RSQASALGSNLSIVQTRQDFSKSLINVLQTGSSNLTLADTNEEAANSQALSTRQSIAVSA 719
Query: 436 LSIVNNSTARILSLFR 451
LS+ N+S +L L R
Sbjct: 720 LSLANSSQQGVLQLLR 735
>gi|167561215|ref|ZP_02354131.1| flagellar hook-associated protein FlgL [Burkholderia oklahomensis
EO147]
gi|167568433|ref|ZP_02361307.1| flagellar hook-associated protein FlgL [Burkholderia oklahomensis
C6786]
Length = 410
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/451 (11%), Positives = 116/451 (25%), Gaps = 50/451 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I ++ + D + + +VSSG+ ++ ADN + A + + + L+
Sbjct: 3 ISSSQLYSLNVNMMNDQQAQIAQLYQQVSSGVSLTTPADNPLAAAQAVQLSATSATLAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMS---TIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + + + ++ DV++ G +D ++ ++I + L
Sbjct: 63 TSNQSVVQTALQTESTTLTSVNDVLNAAYQALMHAGDGGLSDSDRAALAAQIQGSRDHLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G ++ K G D G + D + S
Sbjct: 123 TLANTADGAGNYLFSGFQPTTQPFSNKPGGGVTYAGDYGARTVQIADTRTISQGDNGASV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G L VS+ + S +T +F +
Sbjct: 183 FTSVPFLGSLPVPAAGASNTGTGTIGAVSITNPSDPTNTHQFTI---------------- 226
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A + T + + ++ I +G + V + T
Sbjct: 227 -----AFGGTAAAPTYTVTDNTVAPPTTTAAQPYSAGVGINLGGQTVAVSGSPAAGDTFT 281
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
V T V +
Sbjct: 282 VTPAPQAGTDVFATLDTVIAALKSPVGNSQTAS---------------------TALTNT 320
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
M + + + +G + + + L D ++ + +
Sbjct: 321 MATASTKLMNTMTNVLTVQASVGGRLQEVKAMQSVTTTNSLQTTNSLSNLTDTNLPAAIS 380
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ LQ A +A + LSLF+
Sbjct: 381 QFLQLQNSLSAAQKAFVQ-----MQNLSLFQ 406
>gi|316932793|ref|YP_004107775.1| hypothetical protein Rpdx1_1420 [Rhodopseudomonas palustris DX-1]
gi|315600507|gb|ADU43042.1| protein of unknown function DUF1522 [Rhodopseudomonas palustris
DX-1]
Length = 892
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 44/95 (46%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ A ++ + T + A GS S + ++DF K + ++ G L AD
Sbjct: 798 DNKATNAVLDKLSTASTSLRSQASAFGSNLSIVQARQDFSKNLIAVLQTGSSNLTLADTN 857
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV ALS+ N S +L L R
Sbjct: 858 EEAANSQALTTRQSIAVSALSLANQSQQSVLQLLR 892
Score = 62.8 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/364 (14%), Positives = 107/364 (29%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ +++ L+ L Q R+SSG +V+ A DN + A + S +
Sbjct: 1 MSGIVLSNAVRQNLSSLQATADLLATTQSRLSSGKKVNTALDNPTNFFTATSLDSRASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + D IG G + A G++ ++ + K+ ++ + + + +
Sbjct: 61 NNLLDGIGNGVQILQAANTGITSLNKLVDSAKSIANQALQTTSGYSTKSNVSATISGATA 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
D RG+ +++ + + S V I + +D+S
Sbjct: 121 DDLRGTQSFSNAVATSNVIFDGTAGGTTAASSTDTLGGAIVSIASDPSTPVVVAAAVDNS 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G+ + T A +
Sbjct: 181 AAGSALTVGTAGATAAGTNLISELTNGATSTATGPASGDSITVNGKTITFTTAGAASKDS 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ I + + +T + SG S A + T NS + + + ++ +
Sbjct: 241 EGNYTIGIDQTVNSLLDTIDTINNNSGLTSTVTAGAITLHTGTNSPLTIGDNSGGTVLTK 300
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
G T T+ STT + S L + T +
Sbjct: 301 LGLTAQTINTTAAATSTQQISSTTQLFNTNGGLTSTSISDGTQLTVNGKTITFKTADAPQ 360
Query: 361 MEEM 364
+
Sbjct: 361 GNNI 364
>gi|28974951|gb|AAO61412.1| flagellin [Ralstonia solanacearum]
Length = 240
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 67/176 (38%), Gaps = 3/176 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ +N S++ Q L L+ R+S+G+RV+ A D+AA ++ + + + + +
Sbjct: 1 LSLNSNISSLQTQQALSQSQSALQKSLQRLSTGMRVNSAQDDAAAYAASSSLTTTLNSQT 60
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
+S + A + + + + + ++ D ++ E QL +
Sbjct: 61 QGIQNANGANSYLQTADSYLGQVENNLQRMRQLAVEANNGGLSAADQTNLDKEYQQLATA 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
++I +++NG + S+T ++ N + +
Sbjct: 121 NKNIETNANYNGNKLFDGSVASTTFQYGQNAATDVATVTNVDMSAYGTLAGTSVTS 176
Score = 41.7 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 36/108 (33%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + + V ++ + + IDT +
Sbjct: 133 NKLFDGSVASTTFQYGQNAATDVATVTNVDMSAYGTLAGTSVTSVANATAAQAAIDTDLT 192
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
AA +G+ S + + + A+ LVD D ASE++
Sbjct: 193 SLKAARASLGAQQSGLASTINTLTSNNTALSAAKSTLVDTDYASETSN 240
>gi|168333688|ref|ZP_02691943.1| flagellin protein FliA(A) [Epulopiscium sp. 'N.t. morphotype B']
Length = 255
Score = 65.5 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 3/182 (1%)
Query: 31 VSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMST 90
+S+G +V++AADN A +IA M S L+A S+ I S+ ++A +S + +S
Sbjct: 38 LSTGKKVNEAADNPAVMAIATKMVSAYIGLNAQSNNIESEMSRSNVADGALSDSQATLSR 97
Query: 91 IKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
+ D IQ E+ QL QL I++ + FN + + +
Sbjct: 98 MNELALQANNGILTDEDRSYIQMEMDQLGEQLGSISKNTEFNTKAVFDEEGIDFSEDTLG 157
Query: 148 SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
S + + + + + +
Sbjct: 158 SFSVDVTDPNALSQIRGMSSAVSSMQAEVGADYNANESEVRSNNITAENTMAAVSQMQDT 217
Query: 208 VS 209
Sbjct: 218 DY 219
Score = 42.8 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 11/118 (9%), Positives = 32/118 (27%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+D L S + +++ + +S I
Sbjct: 117 YIQMEMDQLGEQLGSISKNTEFNTKAVFDEEGIDFSEDTLGSFSVDVTDPNALSQIRGMS 176
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
++ ++G+ + + + + V ++ D D A ++ + Q
Sbjct: 177 SAVSSMQAEVGADYNANESEVRSNNITAENTMAAVSQMQDTDYAESTSAILKNNLLDQ 234
>gi|167626162|ref|YP_001676456.1| flagellar hook-associated protein 3 [Shewanella halifaxensis
HAW-EB4]
gi|167356184|gb|ABZ78797.1| flagellar hook-associated protein 3 [Shewanella halifaxensis
HAW-EB4]
Length = 305
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/191 (9%), Positives = 56/191 (29%), Gaps = 3/191 (1%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+ Q L++ +++ + + +S+G + +D+ + D A + S
Sbjct: 11 NNLQSLQNSTFDIAKLNEMMSTGSSILRPSDDPIGAVKVIGNERDMAATNQYIKNTESLS 70
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSF 128
+ ++ MS +++ ++ + D + +E+ +L D
Sbjct: 71 TSFSRSETYMSSMVELQGRMREITVSANNGSLSPEDRAAYAAEMNELLEAFADTLNAKDE 130
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
+G + + + + D ++ T
Sbjct: 131 SGNYLFSGNKTDTPPIGKDADGNYVYQGDTNTREVQTSGSSWMTANSTAADFIFSNGSTD 190
Query: 189 LLDRNHKIKVE 199
+L++
Sbjct: 191 ILNQTKDFIAA 201
>gi|192290923|ref|YP_001991528.1| flagellin [Rhodopseudomonas palustris TIE-1]
gi|192284672|gb|ACF01053.1| protein of unknown function DUF1522 [Rhodopseudomonas palustris
TIE-1]
Length = 892
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ A +++ + T + A GS S + ++DF K + + ++ G L AD
Sbjct: 798 DNNATNAVLTKLSTASTTLRSQASAFGSNLSVVQARQDFSKSLINVLQTGSANLTLADTN 857
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV ALS+ N S +L L R
Sbjct: 858 EEAANSQALSTRQSIAVSALSLANQSQQGVLQLLR 892
Score = 63.6 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 89/272 (32%), Gaps = 1/272 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ +++ L+ L Q R+SSG +V+ A DN + A + S +
Sbjct: 1 MSGIVLSNAVRQNLSSLQATADLLATTQSRLSSGKKVNTALDNPTNFFTAASLDSRASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ-SQL 119
+ + D IG G + A G++ ++ + K+ ++ S + + +
Sbjct: 61 NNLLDGIGNGVQILQAANTGITSLNKLVDSAKSIANQALQTVAGYASKSNVSATISGATA 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
D+ SF+ + TA A + + + + +
Sbjct: 121 DDLRGTQSFSNAVASSNVVFDGTAGGASTASATDLLGGIAVSIAASAAVTVVGAADNTGL 180
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ T K+ + ASG T K T + A A++
Sbjct: 181 GSALTIGTSGGSATGASKISDLTNGVTATATGPASGDAITVNGKTITFTTAGTAKADSEG 240
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
+ G+ L A N + + + +
Sbjct: 241 NYTIGLDQDLTALTKTIDAMNNNTTNASAVTA 272
>gi|213967574|ref|ZP_03395722.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
tomato T1]
gi|301385721|ref|ZP_07234139.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
tomato Max13]
gi|302060066|ref|ZP_07251607.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
tomato K40]
gi|302134825|ref|ZP_07260815.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|213927875|gb|EEB61422.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
tomato T1]
Length = 530
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/361 (10%), Positives = 96/361 (26%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + + N+ D V+SG++++ A+D+ + + N L+
Sbjct: 3 ISTTQFFESTNANYQRNYANVIKTGDEVTSGIKLNTASDDPVGAARVLQLAQQNSMLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ IG ++ + ++ ++ +D M + + + ++ +L+ I
Sbjct: 63 ASNIGTINTNIVNSETALTSIVDTMQAAREVVVSAGNGAYTDSDRLAKAAELKQYQSQIL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ N GS +++ + +G + + +
Sbjct: 123 GLMNSQDANGQYIFAGSKSSAPPYAQNADGTYSYSGDQTSVNLAIGDGLVLPSNTTGHEA 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
E+ R + P + S + + + T +
Sbjct: 183 FEQAVNTTRTSSTLLSPATDDGKVGLTGGQVTSTSAYNSGYQSGEPYTMTFLSGTQFKIT 242
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
V A+ A + + T ++ A T + ++ Y
Sbjct: 243 DATGTDVTTDASSAGKFNYASFADQTFTFRGVELTMNVNLSAAESATAATAATALTNRSY 302
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
++ + S S + + A +
Sbjct: 303 ELASTPDTVSASRSPGNTSAATISSSAVGNTTADRTAFNNTFPPNGAILKFTSATAYDLY 362
Query: 364 M 364
Sbjct: 363 A 363
Score = 39.7 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 57/455 (12%), Positives = 122/455 (26%), Gaps = 21/455 (4%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRV-SSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+I TN +++ L I ++ ++ V S+G +D A + + +S L
Sbjct: 68 TINTNI--VNSETALTSIVDTMQAAREVVVSAGNGAYTDSDRLAKAAELKQYQSQILGLM 125
Query: 62 AVSDAIGL---------GSSKVDIAKAGM----SKAIDVMSTIKNKITAGVERGTDSKSI 108
DA G A + ++ + G ++
Sbjct: 126 NSQDANGQYIFAGSKSSAPPYAQNADGTYSYSGDQTSVNLAIGDGLVLPSNTTGHEAFEQ 185
Query: 109 QSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
T+ S L A G + S+ S +S + +G T
Sbjct: 186 AVNTTRTSSTLLSPATDDGKVGLTGGQVTSTSAYNSGYQSGEPYTMTFLSGTQFKITDAT 245
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
D T + + + + A+ + + +
Sbjct: 246 GTDVTTDASSAGKFNYASFADQTFTFRGVELTMNVNLSAAESATAATAATALTNRSYELA 305
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
+ + ATI A T + + ++ +
Sbjct: 306 STPDTVSASRSPGNTSAATISSSAVGNTTADRTAFNNTFPPNGAILKFTSATAYDLYASP 365
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL-----DSRKDLPKEIDSGYSMVT 343
V +++K + + + + V T + + +
Sbjct: 366 VTSSSKPVSSGTLTGSTANASGVNFTVSGTPAAGDQFVVESGTHQTENILNTLTAAIKAL 425
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
T + A+ + I + I A+ A G+ Q +L++
Sbjct: 426 STPTDGNLVASQKLDAALGSALGNISSSIDQASTARSAGGARQLAATAQGTTNELLKGNN 485
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
G V+AD+ +TRL+ +T + Q
Sbjct: 486 TVEQGTYVNADIVEATTRLTLQKTMLDASQQVFVQ 520
>gi|82940576|emb|CAJ44299.1| putative Flagellin protein [Rhizobium leguminosarum bv. viciae]
Length = 73
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/72 (65%), Positives = 56/72 (77%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN++AM+A Q LR IN L+ Q VSSG RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNNAAMAALQTLRGINQGLQETQAHVSSGYRVGKASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSS 72
SAVSDA+GLG++
Sbjct: 61 SAVSDALGLGAA 72
>gi|152980733|ref|YP_001353118.1| FlgL flagellar hook-associated proteins 3 [Janthinobacterium sp.
Marseille]
gi|151280810|gb|ABR89220.1| FlgL flagellar hook-associated proteins 3 [Janthinobacterium sp.
Marseille]
Length = 404
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/430 (11%), Positives = 111/430 (25%), Gaps = 44/430 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S K+ D+ + Q +++SGLR+ AD+ + A + +
Sbjct: 3 ISTNTIFEMGSGKIGDMTLAMFKTQQQIASGLRILSPADDPVAAAAALGIDQAISINNQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ S + ++ + ++ +IK + D Q+ +TQL++ ++
Sbjct: 63 ATNRANAKSALSEEESVLQSVTTLLQSIKTSVVGSGNASMDDSQRQAYVTQLRNNFEELL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ G N G + + + Q + S+
Sbjct: 123 GLANTRGANGDYLFGGYQVGNKPFTESAGGAVYSGDQGQRMLQVGAARQLSSSDSGSSIF 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
R + + ++ T T S A Q
Sbjct: 183 EGGMTGNGRFQTSASNANTGSGLISTGSVTDLSLLTGAKYDITFSIDAAGATTYLVTQTP 242
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
AT P P T G +
Sbjct: 243 PPATPATPQPYVSGQAITFDGMTFDVKGV------------------------------- 271
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ ++ +++ + + L+ + +
Sbjct: 272 -------------PANGDTFSIEPSTNQSIFTTITDLLNVLSTSTTGEGGKTRLTNGLSI 318
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ ID + + +G+ I ++ + + +L + D +R +
Sbjct: 319 ANNNIDNALANISKVRTTVGTRLQEIDNLDNVGSNLTLQYTDTLKQLQEIDPIEAYSRFT 378
Query: 424 ALQTQQQLAV 433
Q A
Sbjct: 379 QQQFALDAAQ 388
>gi|316934927|ref|YP_004109909.1| hypothetical protein Rpdx1_3607 [Rhodopseudomonas palustris DX-1]
gi|315602641|gb|ADU45176.1| protein of unknown function DUF1522 [Rhodopseudomonas palustris
DX-1]
Length = 891
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ A +++ + + A GS S + ++DF K + + ++ G L AD
Sbjct: 797 DNNATNAVLTKLSAASTTLRSQASAFGSNLSVVQARQDFSKSLINVLQTGSANLTLADTN 856
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV ALS+ N S +L L R
Sbjct: 857 EEAANSQALSTRQSIAVSALSLANQSQQGVLQLLR 891
Score = 62.8 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 87/272 (31%), Gaps = 1/272 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ +++ L+ L Q R+SSG +V+ A DN + A + S +
Sbjct: 1 MSGIVLSNAVRQNLSSLQATADLLATTQSRLSSGKKVNTALDNPTNFFTAASLDSRASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER-GTDSKSIQSEITQLQSQL 119
+ + D IG G + A G++ ++ + K+ ++ + T +
Sbjct: 61 NNLLDGIGNGVQILQAANTGITSLNKLVDSAKSIANQALQTVAGYATKSNVSATISGATA 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
D+ SF+ + +A A + GS +
Sbjct: 121 DDLRGTQSFSNAVASSNVVFDGSAGGATTASGSDLLGGVAVSIAAATAVTALGAADNTAL 180
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ T K+ + A+G T K T + A A++
Sbjct: 181 GSALTVGTASGAATGTSKISDLTNGLTATATGPAAGDAITVNGKTITFTTAGAAKADSEG 240
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
+ G+ L A N + + + +
Sbjct: 241 NYTIGLDQDLTALTKTIDAMNNNTTNASTVTG 272
>gi|92116891|ref|YP_576620.1| hypothetical protein Nham_1336 [Nitrobacter hamburgensis X14]
gi|91799785|gb|ABE62160.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 528
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 46/95 (48%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + +++ + + A GS S + +++DF K + + ++ G L AD
Sbjct: 434 DNASTNKVLDTLSNASSSLRSQASAFGSNLSVVQIRQDFNKNLINVLQTGSSNLTLADTN 493
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV AL++ N S +L L R
Sbjct: 494 EEAANSQALSTRQSIAVSALALANQSNQSVLQLLR 528
Score = 58.2 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 50/110 (45%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ + S L+ L Q+R+++G +V+ A DN + AQ + + G +
Sbjct: 1 MSGIVLSASVRQNLLSLQSTADLLSTTQNRLATGNKVNSALDNPTNFFTAQGLDNRAGDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS 110
+ + D+IG G + A G++ ++ T K+ ++ + S
Sbjct: 61 NNLLDSIGNGVQVLQAANTGITSLQKLVDTAKSIANQALQTPSGYSQKSS 110
>gi|90423516|ref|YP_531886.1| hypothetical protein RPC_2012 [Rhodopseudomonas palustris BisB18]
gi|90105530|gb|ABD87567.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 572
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 45/99 (45%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ ++ S + + A GS + + +++F K M + ++KG L A
Sbjct: 474 NFASNEEIKTATSQLTNAASTLRSQASTFGSNLTVVQNRQNFTKHMMNILDKGASDLTRA 533
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
D+ E+ AL + L++ ALS+ N S IL L RG
Sbjct: 534 DLNEETANQQALSLRNSLSISALSLANQSQQSILQLLRG 572
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 40/96 (41%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I + + L+D L Q R+S+ +V+ A DN + AQ + + + L
Sbjct: 3 SDITLSSATRQNLLSLQDTAELLATTQSRLSTQKKVNSALDNPVNYFAAQGLSARSADLL 62
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA 97
+ D I G V A G+++ ++ K+
Sbjct: 63 NLMDGIANGVQTVQAANQGITRIQGLIDAAKSAAQQ 98
>gi|213022452|ref|ZP_03336899.1| flagellin [Salmonella enterica subsp. enterica serovar Typhi str.
404ty]
Length = 45
Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
R+ D+D A+E + +S Q QQ L+ N +LSL R
Sbjct: 1 RSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR 45
>gi|315301956|ref|ZP_07872953.1| flagellar hook-associated protein 3 [Listeria ivanovii FSL F6-596]
gi|313629674|gb|EFR97810.1| flagellar hook-associated protein 3 [Listeria ivanovii FSL F6-596]
Length = 215
Score = 64.8 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 56/188 (29%), Gaps = 3/188 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A + +L +++ NL Q +VSSG + + N + L+
Sbjct: 3 ISTNQQANTIINQLNNVSGNLAKYQLQVSSGKKYESMSQNPGATAQILSYNHVLSQLNRE 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLR 120
+ S ++ A+ +S M+ + + + +D ++ EI L L
Sbjct: 63 KTDVTEAKSLLNTAETSLSSMTTSMNRVNALVLQAINGTSDKNNMSQSAEEIKGLLGVLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + + + K+ D +
Sbjct: 123 SVANAEDDGRYVFSGSSTSVKPFTTDKTTGEIIYNGTTENKNFRVTDTLEVEVFHDGSAM 182
Query: 181 TDGTERYG 188
TD
Sbjct: 183 TDVFNNIQ 190
>gi|255018231|ref|ZP_05290357.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL
F2-515]
Length = 226
Score = 64.8 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 67/221 (30%), Gaps = 3/221 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN A S +L +++ NL Q +VSSG + ++N + L
Sbjct: 1 MMRISTNQQASSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQS 117
+ + S ++ A+ +S M+ + + + +D ++ EI L
Sbjct: 61 NREKTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTSDKDNMSQSAEEIKGLLD 120
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
L +A + + + K+ + D
Sbjct: 121 VLISVANSEDDGRYVFSGSSTSVKPFTTDKTTGEIIYSGTTENKKFRVTDTLEVEVFHDG 180
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+ TD + K + + + + + +
Sbjct: 181 SAMTDVFNNIQKIVDAMKTGDKDALSALQETNSKNIEIITN 221
>gi|170738884|ref|YP_001767539.1| flagellin hook IN repeat-containing protein [Methylobacterium sp.
4-46]
gi|168193158|gb|ACA15105.1| flagellin hook IN repeat protein [Methylobacterium sp. 4-46]
Length = 693
Score = 64.8 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 79/204 (38%)
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
I + T+ +G+ S +SA G + +T N++ + +
Sbjct: 490 ITTANDSGTDDLKITASGTGNPFNSGTSSAVIGGDGLTARNGLVSTFNNLLTQIDQLAAD 549
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
G DT + + + + T + + E A+ +++
Sbjct: 550 SGYNGVNLLAGDTLKISFNEKNTSTLSVQGSTVSYTQLGLSVLSQSDFQENSAINKVIKS 609
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
I+T + A +G+ + + ++DF K M + ++ G L +AD+ E+ AL T
Sbjct: 610 INTAASSLKSQASSLGANLAVVQNRQDFTKQMINVLDTGAANLTNADLNEEAANSQALST 669
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
+ L + ALS+ N + +L L R
Sbjct: 670 RNSLGISALSLANQAQQSVLQLLR 693
Score = 58.2 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 51/117 (43%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SI + + L+D L Q+R+++ +V+ A DN + A + S + AL
Sbjct: 1 MSSITLSAATRQNLLSLQDTASLLATTQNRLATSKKVNTALDNPTNFFTADGLSSRSTAL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQS 117
S++ D++ G + A G++K + +K+ + + ++ +
Sbjct: 61 SSLLDSVSNGIQTIQAANTGLTKVQTLTDQLKSVAQQALASANSFSVKATSVSTALT 117
>gi|261341487|ref|ZP_05969345.1| flagellar hook-associated protein 3 [Enterobacter cancerogenus ATCC
35316]
gi|288316283|gb|EFC55221.1| flagellar hook-associated protein 3 [Enterobacter cancerogenus ATCC
35316]
Length = 305
Score = 64.8 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 62/174 (35%), Gaps = 2/174 (1%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N AM A L + + +++++ R++ +D+ + + + A+
Sbjct: 8 NSDAMMAQ--LGVNGTRMSKLMEQMATQKRINVPSDDPVAATRLVQLNREQSAIKQYQSN 65
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGS 126
I S + +A ++ + + ++ +K+ A S+ ++ +L S L +
Sbjct: 66 ITGLSGSLSGQEAHVTAMSNQLLSMNDKLLAAANGTHSSEDMKGFGAELSSMLDSLVASI 125
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ E+ G+ T + + + T + V +++
Sbjct: 126 NAQNESGGYLFSGTKTDTKPVVWDETQGKYVYQGNNGTRETTVANGVNVTENTN 179
>gi|296282272|ref|ZP_06860270.1| flagellar hook-associated protein FlgL [Citromicrobium
bathyomarinum JL354]
Length = 306
Score = 64.8 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 17/141 (12%), Positives = 52/141 (36%), Gaps = 3/141 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ T ++ ++ + E +Q ++ +G R+ ++D+ + +++ +
Sbjct: 1 MISLSTGAFYERSATQIGSLRSRAESLQKQIGTGERLERSSDDPVAAARLRMLDREERVT 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQS 117
+ + + + + + ++S + SI +E+ L+
Sbjct: 61 AVDTRNADQAENNMRFTDEALGQIATMISRARELALHAANATTSDDQRASIATELDGLRE 120
Query: 118 QLRDIARGSSFNGENWLRTDL 138
L +A G + +G +
Sbjct: 121 SLLGLANGRNASGHSLFGGQA 141
>gi|289433984|ref|YP_003463856.1| flagellar hook-associated protein FlgL, putative [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|289170228|emb|CBH26768.1| flagellar hook-associated protein FlgL, putative [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|313634356|gb|EFS00953.1| flagellar hook-associated protein 3 [Listeria seeligeri FSL N1-067]
gi|313639050|gb|EFS04038.1| flagellar hook-associated protein 3 [Listeria seeligeri FSL S4-171]
Length = 291
Score = 64.8 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/218 (13%), Positives = 65/218 (29%), Gaps = 3/218 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A + +L +++ NL Q +VSSG + + N + L+
Sbjct: 3 ISTNQQANTIINQLNNVSGNLAKYQLQVSSGKKYESMSQNPGATAQILSYNHVLSQLNRE 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLR 120
+ S ++ A+ +S M+ + + + +D ++ EI L L
Sbjct: 63 KTDVTEAKSLLNTAETSLSSMTTSMNRVNALVLQAINGTSDKNNMSQSAEEIKGLLGVLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + + + K+ D +
Sbjct: 123 SVANAEDDGRYVFSGSSTSVKPFTTDKTTGEIIYNGTTENKNFRVTDTLEVEVFHDGSAM 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
TD + K + + +++ + +
Sbjct: 183 TDVFNNIQKIVDAMKTGDKDALSGLQEINSQNIEIITN 220
>gi|322421654|ref|YP_004200877.1| flagellar hook-associated protein 3 [Geobacter sp. M18]
gi|320128041|gb|ADW15601.1| flagellar hook-associated protein 3 [Geobacter sp. M18]
Length = 306
Score = 64.8 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 55/148 (37%), Gaps = 3/148 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +A +A L+ ++ +Q++++SG ++ +D+ ++ +
Sbjct: 3 ITPGMTAENAIYNLQLGRSAIDQLQEQIASGYNINRPSDDPLTTRQLLDLQDQIDSGEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI---TAGVERGTDSKSIQSEITQLQSQLR 120
S I + +++ ++ D+M +K G + S S +TQL+SQL
Sbjct: 63 SSNITKAETLLNVTNTALTSMADLMQQVKKIAGDMVTGTLDASSISSAVSNLTQLKSQLV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKS 148
D+ + + +
Sbjct: 123 DMGNTRLGDQYVFAGYKTSQPFDAAGAF 150
>gi|115526488|ref|YP_783399.1| flagellin [Rhodopseudomonas palustris BisA53]
gi|115520435|gb|ABJ08419.1| protein of unknown function DUF1522 [Rhodopseudomonas palustris
BisA53]
Length = 917
Score = 64.8 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 90/272 (33%), Gaps = 1/272 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ +++ L+ L Q R+SSG +V+ A DN + A + S + +
Sbjct: 23 MSGIVLSNAVRQNLSSLQATAELLATTQSRLSSGKKVNSALDNPTNFFTAASLDSRSSDI 82
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER-GTDSKSIQSEITQLQSQL 119
+ + D IG G + A G++ ++ + K+ ++ + T +
Sbjct: 83 NNLLDGIGNGVQILQSANTGITSLNKLVDSAKSIANQALQTVAGYATKSNVSATISGATA 142
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
D+ SF+ + ++ A + GS + + +
Sbjct: 143 DDLRGTQSFSNAVASSNVVFDGSSGGATTASGSDLLGGVAVSIAASAAKTVVGAADNTAL 202
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ T + K+ + ASG T K T + A + A++
Sbjct: 203 GSALTVGTASGAATNTSKISELTNGLTATATGPASGDAITVNGKTITFTTAGVAKADSEG 262
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
+ G+ L A N + +
Sbjct: 263 NYTIGLDQDLAALTKTIDAMNNNTTNPSIVTG 294
Score = 64.0 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 46/105 (43%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ A+ + + A ++ + + A GS S + ++DF K + ++ G
Sbjct: 813 SNLASGVDFIDNKATNAVLDKLSAASTTLRSQASAFGSNLSVVQARQDFSKSLISVLQTG 872
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
L AD E+ AL T+Q +AV AL + N S +L L R
Sbjct: 873 SANLTLADTNEEAANSQALSTRQSIAVSALGLANQSQQGVLQLLR 917
>gi|160939639|ref|ZP_02086987.1| hypothetical protein CLOBOL_04531 [Clostridium bolteae ATCC
BAA-613]
gi|158437430|gb|EDP15194.1| hypothetical protein CLOBOL_04531 [Clostridium bolteae ATCC
BAA-613]
Length = 327
Score = 64.4 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/202 (12%), Positives = 62/202 (30%), Gaps = 2/202 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + ++ L+ +L ++SS + + +++ A S A ++
Sbjct: 3 ITENMMTSTYNRNLQRNISDLASSNLKLSSKRQYNHVSEDPATASKAFAIRDQIARSEEH 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG--VERGTDSKSIQSEITQLQSQLRD 121
+ ++D A + + ++ T+ K T +I E+ L+ ++
Sbjct: 63 ISVVKNARGELDTADSNIVTLNSILETVYEKATKAGGASSQDSMDAIAEELGGLKEEILQ 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ + + + ++ F D Y D +
Sbjct: 123 TMNAKYGDKFLFSGSSNSEAPFTVDGDGNLLFNGKPVDAYDKNDPDTYFDENKPVYLDIG 182
Query: 182 DGTERYGLLDRNHKIKVEPQVL 203
GT G IK+ +
Sbjct: 183 FGTYASGTNTAKTGIKISTSGV 204
>gi|167628880|ref|YP_001679379.1| flagellar hook-associated protein 3, putative [Heliobacterium
modesticaldum Ice1]
gi|167591620|gb|ABZ83368.1| flagellar hook-associated protein 3, putative [Heliobacterium
modesticaldum Ice1]
Length = 309
Score = 64.4 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/242 (11%), Positives = 68/242 (28%), Gaps = 7/242 (2%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
L D+ ++ Q ++S+G + D +S ++ +
Sbjct: 13 LTGLYDVAGKMDKTQFQLSTGRQYRLPEDAPMENVQIMTHRSTLVQVNKYMKNTSEIQTW 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
++ + + +S+ +V+ ++ I T +++ ++ +I+ +
Sbjct: 73 LENSDSALSEVNNVLQRVRELILQADNGTTTTEAKKATA-------DEISELNDHLKNVS 125
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
T G + + +D NG + + ++ E ++ + RN
Sbjct: 126 NTTIAGRYIFAGTNTDRPPCAKDTNGYWKWNGNNGDINVEIDAKAVVAMNSKGTNVFVRN 185
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
V + T K T A F V
Sbjct: 186 DFNWPGSPVPEPEKNLFNFLDSLTKTLKDANTTEDLDTYLAITDKFLDGVNEERASVGAR 245
Query: 254 AA 255
A
Sbjct: 246 AN 247
Score = 54.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 12/109 (11%), Positives = 34/109 (31%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ D + ++ + N ++ ++ D +
Sbjct: 174 MNSKGTNVFVRNDFNWPGSPVPEPEKNLFNFLDSLTKTLKDANTTEDLDTYLAITDKFLD 233
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+G+ ++RI + ++ + + + + DADMA T +
Sbjct: 234 GVNEERASVGARANRIDFTKSRLEEFQLHITEALSDREDADMAQVYTNM 282
>gi|170739025|ref|YP_001767680.1| flagellin hook IN repeat-containing protein [Methylobacterium sp.
4-46]
gi|168193299|gb|ACA15246.1| flagellin hook IN repeat protein [Methylobacterium sp. 4-46]
Length = 692
Score = 64.4 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 80/204 (39%)
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
I + T+ +G+ S +SA G + +T N++ + +
Sbjct: 489 ITTANDSGTDDLKITASGTGNPFNSGTSSAVIGGDGLTARNGLVSTFNNLLTQIDQLAAD 548
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
G DT + + + + T + + E A+ +++
Sbjct: 549 SGYNGVNLLAGDTLKISFNEKNTSTLSVQGSTVSYTQLGLNVLSQSDFQENSAINKVIKS 608
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
I+T + A +G+ + + ++DF K M + ++ G L +AD+ E+ ALQT
Sbjct: 609 INTAASSLKSQASSLGANLAVVQNRQDFTKQMINVLDTGAANLTNADLHEEAVNSQALQT 668
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
+ L V ALS+ N + +L L R
Sbjct: 669 RNSLGVSALSLANQAQQSVLQLLR 692
Score = 55.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 48/114 (42%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + ++D L Q+R+++G +V+ A DN + A + S + ALS++
Sbjct: 3 ITLTAATRQNLLSMQDTASLLATTQNRLATGKKVNTALDNPTNFFTADGLSSRSTALSSL 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQS 117
D++ G + A G++K + +K+ + + ++ +
Sbjct: 63 LDSVSNGIQTIQAANTGLTKVQTLTDQLKSVAQQALASANSFSVKATSVSTALT 116
>gi|22676856|gb|AAL99373.1| flagellin [Borrelia burgdorferi]
gi|22676858|gb|AAL99374.1| flagellin [Borrelia burgdorferi]
Length = 205
Score = 64.4 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/160 (11%), Positives = 43/160 (26%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G W + + N A V N ++ +
Sbjct: 46 GAQASWTLRVHVGANQDEAIAVNIYSANVANLFNGEGAQAAPAQEGAQQEGVQAAPAPAA 105
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + +S I+ I+ + +G+ +R+ + +
Sbjct: 106 APVQGGVNSPINVTTAIDANMSLSKIEDAIRMVSDQRANLGAFQNRLESVKSSTDYAIEN 165
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNS 442
++ ++ DA M E + Q A+ ++ N
Sbjct: 166 LKASYAQIKDAIMTDEIVASTTNSILTQSAMAMIAQANQV 205
>gi|254227990|ref|ZP_04921420.1| flagellar hook-associated protein 3 [Vibrio sp. Ex25]
gi|262396028|ref|YP_003287881.1| flagellar hook-associated protein FlgL [Vibrio sp. Ex25]
gi|151939486|gb|EDN58314.1| flagellar hook-associated protein 3 [Vibrio sp. Ex25]
gi|262339622|gb|ACY53416.1| flagellar hook-associated protein FlgL [Vibrio sp. Ex25]
Length = 299
Score = 64.4 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 54/143 (37%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + Q L+ N L V ++++G R++ +D+ + +N A++
Sbjct: 3 ISDNQFSQMMLQSLQGNNAGLGHVLQQMTTGERLTKLSDDPMASIKLLNLDRENSAIAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ I + + + + + + ++++ G + IT+L+S I
Sbjct: 63 QNNIANVKTTLSSQETHLDSVKESLMSMRDIALWGANGSLTDQDRTGMITELKSYRDSIE 122
Query: 124 RGSSFNGENWLRTDLGSSTASIA 146
+ E G+ T + A
Sbjct: 123 SSFNAQDEEGHYLFSGTKTDTPA 145
>gi|95929884|ref|ZP_01312625.1| flagellin-like [Desulfuromonas acetoxidans DSM 684]
gi|95134180|gb|EAT15838.1| flagellin-like [Desulfuromonas acetoxidans DSM 684]
Length = 641
Score = 64.4 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 12/99 (12%), Positives = 39/99 (39%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDI 76
L IN LE ++ + ++G +++ +D+ A ++ A ++ ++D
Sbjct: 16 LNSINNQLENLRTQEATGKKLNRPSDDPAAIRPVLSARTQIRASERFISSMETSLDRLDN 75
Query: 77 AKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL 115
+ + +A +++ K + +++ +
Sbjct: 76 LDSYLDQAENLLVNAKETTINAINASMSDADMETLADSI 114
Score = 40.1 bits (91), Expect = 0.67, Method: Composition-based stats.
Identities = 24/277 (8%), Positives = 83/277 (29%)
Query: 159 GKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+ + DGT + + N I + + + + T +
Sbjct: 352 SYTTLNGTAMSGPTTGGGDLTIGDGTTQIDVAASNSAIDLATNLETAATAAGLTVTATAA 411
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
+ + A + + ++ A + + + + + AA T
Sbjct: 412 DSTSGSDLFAWTDVTATDPPYSLTVEGISLFAADADGVTAADVDAAVAANAAAFAAAGVT 471
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
+ + ++ + + G
Sbjct: 472 VSGSATGGDLAFSRVDGDNLDIVQDAGGAAVGFTDISNDGSGDTYYGEVTITSGADFTIG 531
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ ++++ E ++++++ ++T ++ +G+ ++RI +D ++
Sbjct: 532 GANPSVSLLPDGAPLQLREVPDLQDLLARLETSADGVRSSRSLMGNNAARIETSKDHMEG 591
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ +++ + R D D+ T ++ +T + A+
Sbjct: 592 VLIDLQQILSRYEDVDLIDVITEITQTETALEAALSV 628
>gi|240147521|ref|ZP_04746122.1| flagellin [Roseburia intestinalis L1-82]
gi|257200268|gb|EEU98552.1| flagellin [Roseburia intestinalis L1-82]
Length = 61
Score = 64.4 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 22/55 (40%)
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
I +R+ + ++ R+ D DMA E TR S QQ A L+
Sbjct: 4 IQNRLEYTVKVDDNTSENLQSAESRIRDTDMADEMTRFSKESILQQAATSMLAQA 58
>gi|156976148|ref|YP_001447054.1| flagellar hook-associated protein FlgL [Vibrio harveyi ATCC
BAA-1116]
gi|156527742|gb|ABU72827.1| hypothetical protein VIBHAR_04919 [Vibrio harveyi ATCC BAA-1116]
Length = 299
Score = 64.4 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 53/143 (37%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + Q L+ N L V ++++G R++ +D+ ++ +N A+
Sbjct: 3 ISDSQFSQMMLQSLQTNNAGLGHVLQQMATGDRLTKLSDDPIASIKLLNLERENSAIGQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + + ++++ + G + I +L+S I
Sbjct: 63 QSNIANLKTTLSAQETHLDSVNESLKSVRDLVLWGANGTLTDEDRSGMIIELKSYRDSIE 122
Query: 124 RGSSFNGENWLRTDLGSSTASIA 146
+ E G+ T + A
Sbjct: 123 SSFNAQDEEGHYLFSGTQTDTPA 145
>gi|296127805|ref|YP_003635057.1| flagellin domain protein [Brachyspira murdochii DSM 12563]
gi|296019621|gb|ADG72858.1| flagellin domain protein [Brachyspira murdochii DSM 12563]
Length = 267
Score = 64.0 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 34/106 (32%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ + + + + I IK +G+ +R + + +
Sbjct: 162 KNEFNSYISISSVSNANKSIGIIYEAIKHVIKQRSDLGAYQNRFDEYTHGLMTYYENMVS 221
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +D D+A S + + Q A+ + NN L L +
Sbjct: 222 YGSKKMDKDIAEASIYETISSIKSQAALAMIVHSNNMPQNALILLQ 267
Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 3/99 (3%)
Query: 56 DNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEI 112
L G S V A + + + ++ I+ TD +Q+E+
Sbjct: 40 QARYLMRAEKNTQDGISFVQTADGYIEETMSILQRIRELSIKASNGVYSNTDRLYMQTEV 99
Query: 113 TQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
+ L ++ IA S FN +S + A I
Sbjct: 100 SSLIDEIDKIASQSQFNTLKIFTGRFANSENASASMWIH 138
>gi|319790355|ref|YP_004151988.1| flagellar hook-associated protein 3 [Thermovibrio ammonificans
HB-1]
gi|317114857|gb|ADU97347.1| flagellar hook-associated protein 3 [Thermovibrio ammonificans
HB-1]
Length = 312
Score = 64.0 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 39/116 (33%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+ +SSG + +D+ ++ + L + I L + +D A++ ++ + +
Sbjct: 28 EELSSGKSILRPSDSPVDYARLLRLDRFVENLDRFNRNIDLVKANMDTAESALASTVQTL 87
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+ KI + G + + ++D G T S
Sbjct: 88 EAARVKIIQILNTGALNGEDAKTLADYFESVKDYVIQMGNEKVGDAYLFGGVKTQS 143
Score = 44.0 bits (101), Expect = 0.055, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 27/75 (36%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ +++ D + +G+ + + + + + ++ ++ DAD A
Sbjct: 220 DGPQTMKLLDAFDAGLSKIMEYRSILGTQVALVDDLKTQNEAVALHAKELRSKIGDADFA 279
Query: 417 SESTRLSALQTQQQL 431
S + +T Q
Sbjct: 280 SVISDYDKAKTAYQA 294
>gi|107023945|ref|YP_622272.1| flagellar hook-associated protein FlgL [Burkholderia cenocepacia AU
1054]
gi|116691032|ref|YP_836655.1| flagellar hook-associated protein FlgL [Burkholderia cenocepacia
HI2424]
gi|254246971|ref|ZP_04940292.1| Flagellin [Burkholderia cenocepacia PC184]
gi|105894134|gb|ABF77299.1| Flagellar hook-associated protein 3 [Burkholderia cenocepacia AU
1054]
gi|116649121|gb|ABK09762.1| flagellar hook-associated protein 3 [Burkholderia cenocepacia
HI2424]
gi|124871747|gb|EAY63463.1| Flagellin [Burkholderia cenocepacia PC184]
Length = 411
Score = 64.0 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 61/179 (34%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T ++ D L + ++SSG+ ++ ADN + A + + LS
Sbjct: 3 ISTAQFYQMNVAQMSDQQAQLSQLYQQISSGVSLATPADNPLGAAQAVQLSMTSATLSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ S + + +++++I + + +D ++ +++ + QL
Sbjct: 63 ASNQNAALSSLQKEDQTLISVNNLLNSIHTVVIQAGDGSLSDSDRSALSTQLQGYRDQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + +G ++ G D G Q+ D + +
Sbjct: 123 TLANSTDGSGNYLFAGFQSATAPFSNAPGGGVTYSGDTGSRQVQIADTRSIAQGDNGAN 181
>gi|312884827|ref|ZP_07744519.1| flagellar hook-associated protein FlgL [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367479|gb|EFP95039.1| flagellar hook-associated protein FlgL [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 298
Score = 64.0 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 52/146 (35%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
+ + L+ N L ++S+G R++ +D+ + ++ AL+ I
Sbjct: 9 SQMMLRSLQVNNAGLAKAMQQMSTGERLTKLSDDPMASIQLLNLGRESAALAQYKSNIAN 68
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFN 129
+ + + + D + + +K+ G + I +++S + +
Sbjct: 69 VKTALSNQEVHLDSVNDSLQNLNDKVLWGANGTLTDGDRAAIIIEIESLRDSVVSSLNAQ 128
Query: 130 GENWLRTDLGSSTASIAKSVIGSFIR 155
E G+ T S++ S +
Sbjct: 129 DEGGRYLFSGTKTDSVSISNVSGTFT 154
>gi|206558977|ref|YP_002229737.1| flagellar hook-associated protein FlgL [Burkholderia cenocepacia
J2315]
gi|198035014|emb|CAR50886.1| flagellar hook-associated protein 3 (HAP3) [Burkholderia
cenocepacia J2315]
Length = 411
Score = 64.0 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 58/179 (32%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T ++ D L + ++SSG+ ++ ADN + A + + LS
Sbjct: 3 ISTAQFYQMNVAQMSDQQAQLSQLYQQISSGVSLATPADNPLGAAQAVQLSMTSATLSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ---SQLR 120
+ S + + +++++I + + + + TQLQ QL
Sbjct: 63 AANQNAALSSLQKEDQTLISVNNLLNSIHTVVIQAGDGSLSDSNRSALSTQLQGYRDQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + G ++ G D G ++ D + +
Sbjct: 123 TLANSTDGAGNYLFAGFKTATAPFSNAPGGGVTYSGDTGSREVQIADTRSIAQGDNGAN 181
>gi|291518844|emb|CBK74065.1| Flagellin and related hook-associated proteins [Butyrivibrio
fibrisolvens 16/4]
Length = 271
Score = 64.0 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/227 (14%), Positives = 70/227 (30%), Gaps = 3/227 (1%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+ + + + ++SG +++ AAD+AA SI++ + + +L A S+ I G
Sbjct: 14 NTTNHMNVTEAKHKKAGKELASGKKINTAADDAAALSISKKLMKEASSLKAGSNNISYGI 73
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSF 128
IA + ++ D + I+ + +D +Q+ Q + + +
Sbjct: 74 DATRIADSALANVTDSLGDIQQNTVRAMNGLYSESDRNILQNANKQSVETINTTINQAKY 133
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
N +N L G D + + + D
Sbjct: 134 NEKNLLDGTTGDINIYTGAGSSTIKEADAKAAMAELENFDISGNPDSISTDALDKAYSSI 193
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
R+ E + D + + + K T +
Sbjct: 194 NSMRSKIGAEENGLSAAFDANNITEMNLTAAQSRKEDTEYNDAVSRY 240
Score = 41.3 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 1/87 (1%)
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+D + KIG+ + + D + + R D + +R A
Sbjct: 184 DALDKAYSSINSMRSKIGAEENGLSAAFDANNITEMNLTAAQSRKEDTEYNDAVSRYKAS 243
Query: 426 QTQQQLAVQAL-SIVNNSTARILSLFR 451
AL + +N+ + LF+
Sbjct: 244 GVVGAAQNMALKNQMNSQENLVNKLFQ 270
>gi|305431608|ref|ZP_07400780.1| flagellin subunit protein FlaB [Campylobacter coli JV20]
gi|304445331|gb|EFM37972.1| flagellin subunit protein FlaB [Campylobacter coli JV20]
Length = 63
Score = 64.0 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 25/63 (39%)
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + I + + V+ + D D A+ES S Q A+S N +L
Sbjct: 1 LQVTINNITVTQVNVKAAESTIRDVDFAAESANFSKYNILAQSGSYAMSQANAVQQNVLK 60
Query: 449 LFR 451
L +
Sbjct: 61 LLQ 63
>gi|23008927|ref|ZP_00050167.1| hypothetical protein Magn03003916 [Magnetospirillum magnetotacticum
MS-1]
Length = 51
Score = 64.0 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+G LVDAD+ EST+L ALQTQQQLAVQALSI N+ + +LSLFR
Sbjct: 7 IGILVDADIEEESTKLKALQTQQQLAVQALSIANSGSQNVLSLFR 51
>gi|115523542|ref|YP_780453.1| flagellin [Rhodopseudomonas palustris BisA53]
gi|115517489|gb|ABJ05473.1| protein of unknown function DUF1522 [Rhodopseudomonas palustris
BisA53]
Length = 887
Score = 63.6 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 46/95 (48%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ A +++ + T + A GS S + +++F K + + ++ G L AD
Sbjct: 793 DNTATNAVLAKLSTASTTLRSQASAFGSNLSIVQARQEFSKNLINVLQTGSSNLTLADTN 852
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+ AL T+Q +AV ALS+ N S +L L R
Sbjct: 853 EEAANSQALSTRQSIAVSALSLANTSQQGVLQLLR 887
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ +L+N + L+ L Q R+SSG +V+ A DN + A + + +
Sbjct: 1 MSVVLSN-AVRQNLSSLQATAEMLATTQSRLSSGKKVNTALDNPTNFFTAASLDARASDI 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS 110
+ + D IG G + A G++ ++ + K+ ++ + + +
Sbjct: 60 NNLLDGIGNGVQILQAANTGITSLNKLVDSAKSIANQALQTTSGYATKSN 109
>gi|148256808|ref|YP_001241393.1| putative flagellin protein, C-terminus [Bradyrhizobium sp. BTAi1]
gi|146408981|gb|ABQ37487.1| Putative flagellin protein, C-terminus [Bradyrhizobium sp. BTAi1]
Length = 523
Score = 63.6 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/259 (15%), Positives = 86/259 (33%)
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
I + AS + + A S + + T
Sbjct: 265 TLTIASTGGGVATNITFGTGASQISTLAQLNTALASNNLQASLSTTGQLTILTTNEAASS 324
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A ++T+ + + + + + A N +
Sbjct: 325 TIGAVAGSSTASSMAFNGVTASTPVADTNSQTTRAGLIAQYNNVLAQINTTAQDASFNGI 384
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
N + ++ + ++ L ++ + + + +++S +++
Sbjct: 385 NLLNGDTLKLVFNETGRSTLNITGVTFNSTGLGLSALVVGTDFLDSNSANKVLSTLNSAS 444
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A +GS S + +++DF K + + ++ G L AD E+ AL T+Q +A
Sbjct: 445 TAIRSEASSLGSNLSIVQIRQDFNKNLINVLQTGSSNLTLADTNEEAANSQALSTRQSIA 504
Query: 433 VQALSIVNNSTARILSLFR 451
V AL++ N S A +L L R
Sbjct: 505 VSALALANQSQASVLQLLR 523
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 52/114 (45%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ + S L++ L Q+ +++G +V+ A DN + AQ + + +
Sbjct: 1 MSGIVLSASVRQNLLALQNTASLLATTQNNLATGNKVNTALDNPTEFFTAQSLNNRASDI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQ 114
+ + D+IG G + A G++ ++ + K+ + ++ T + S +
Sbjct: 61 ANLLDSIGNGVQVLQAANTGLTSLQKLVDSAKSIASQVLQAPTGYTTKSSITSA 114
>gi|327398476|ref|YP_004339345.1| flagellin domain-containing protein [Hippea maritima DSM 10411]
gi|327181105|gb|AEA33286.1| flagellin domain protein [Hippea maritima DSM 10411]
Length = 900
Score = 63.6 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/160 (14%), Positives = 52/160 (32%), Gaps = 3/160 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + + IN + ++++SG R+ D A + S +K N
Sbjct: 3 ITDNILFNNFLYNINKINEKTYINNEKMASGKRLLDLASDPISLSKVLSLKDINMRFDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD-- 121
I ++ +D +S A D++ + G + + ++ I + ++D
Sbjct: 63 VTNINSANAYLDAEDTALSNADDLLHKAGTLLVDGANSLNNDLASRTAIAENLDSIKDEL 122
Query: 122 -IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
+ + F G+ + + I
Sbjct: 123 IDSANTIFQGKYLFSGTKTDTKPIQTIQNEATTINITKDT 162
Score = 51.7 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/306 (10%), Positives = 79/306 (25%), Gaps = 2/306 (0%)
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
F+ + R T A + + + + D + D + +
Sbjct: 577 FDIKTLGRGVDTFRTLDDASYALKNPYSKNQIGKPSSWQDISTFTPVMSGKYLGDKNDTW 636
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ + + D + ++S + K + +
Sbjct: 637 TVKVAKVANTSTTNYQAISENQIEDIASSLSDGQSKTIGMFQITDEEGKTVAVVGLKVKK 696
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNST 307
I S S + I ++ N+
Sbjct: 697 ISSSNFTYYIQTKVPSDPDKKIDFSKTEDLSQIDGTIIFSRESTGFSSASDVATNLINNL 756
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME--EMV 365
V T + + +I+ + N D ++ KL + +
Sbjct: 757 KDIVIQTKDAQMGGNFEGEVNGVAGVKINLLPPAPSGVPLILQNGDTFSFKLTNMVEQAL 816
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ + ++ +G+ +R L + I ++ + K + +L DA++A +
Sbjct: 817 GKVKDSLDQVLSSRSIVGARVNRFKLANERISYIKLSNTKTISKLEDANVADVFSEFKRN 876
Query: 426 QTQQQL 431
Q Q
Sbjct: 877 QIVMQA 882
>gi|2576277|emb|CAA75368.1| flagellin [Borrelia burgdorferi]
Length = 168
Score = 63.6 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 11/106 (10%), Positives = 34/106 (32%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 63 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 122
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
D + + ++ ++ DA M E + Q A+ ++
Sbjct: 123 DSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSAMAMIAQA 168
>gi|91794988|ref|YP_564639.1| flagellin-like protein [Shewanella denitrificans OS217]
gi|91716990|gb|ABE56916.1| flagellin-like protein [Shewanella denitrificans OS217]
Length = 305
Score = 63.6 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/202 (14%), Positives = 64/202 (31%), Gaps = 8/202 (3%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M ++ TN+ L++ ++ + +S GL + +D+ + D A+
Sbjct: 5 MQNLYTNN-----LTSLQNTTADVARLNQMMSQGLSILAPSDDPIGAVRVMASERDLAAV 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQS 117
I S+ + A+ +S ++V ++ + G +D + +EI +L
Sbjct: 60 GQYIKNIDAVSTSLGRAETHLSSMVEVQLRMREIGVLASNGTLSVSDRSAYAAEIDELLK 119
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
L G + +L + + + DN Q+ T
Sbjct: 120 SLVSSINAKDDGGNSVFAGNLVDKATVVLDASGKYVYQGDNNTRQVQTSPSSWIESNATA 179
Query: 178 DSSTDGTERYGLLDRNHKIKVE 199
G +L+
Sbjct: 180 QEVLFGNGSQDILNAAVDFVTA 201
>gi|1147791|gb|AAA85132.1| flagellin [Borrelia lonestari]
Length = 102
Score = 63.6 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 3/99 (3%)
Query: 52 IMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSI 108
+ S LS S + + + +++ ++ +K D SI
Sbjct: 1 KLNSQIRGLSQASRNTSKAINFIQTTEGNLNEVEKILVRMKELAVQSGNGTYSDADRGSI 60
Query: 109 QSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
Q EI QL ++ +A + +N + L + A+
Sbjct: 61 QIEIEQLTDEINRVADQAQYNQMHMLSNKSSAQNVKTAE 99
>gi|117926504|ref|YP_867121.1| flagellin domain-containing protein [Magnetococcus sp. MC-1]
gi|117610260|gb|ABK45715.1| flagellin domain protein [Magnetococcus sp. MC-1]
Length = 272
Score = 63.6 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 6/141 (4%)
Query: 3 SILTNHSAMSASQK---LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
SI N + A Q L + + +SSG++++ A+DN + + S+
Sbjct: 2 SITVNSAMFVAPQSGSQLFKVQEESKSSFAALSSGIKINQASDNPGLMGMISRLTSEVRN 61
Query: 60 LSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQ 116
++ + G S +A+ G+S D + ++ D ++ E QLQ
Sbjct: 62 INVARQNVNQGVSLSQVAQTGVSIVSDDVQRLRELAVQAANGTLSDADRSNLHQEAAQLQ 121
Query: 117 SQLRDIARGSSFNGENWLRTD 137
+ D R + FNG++ L +
Sbjct: 122 QNIADTIRDTQFNGQSLLDRN 142
Score = 61.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/165 (12%), Positives = 51/165 (30%)
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
G R+ T+ + ++++ + + +
Sbjct: 102 NGTLSDADRSNLHQEAAQLQQNIADTIRDTQFNGQSLLDRNSSISIQSGSGAGDQTDLQL 161
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
L+ T + + E ++ +D ++ + +GS +R+ D I
Sbjct: 162 RDLSGLNSTGTIDLSSQAGAEAALAQLDADLQELSDFNSSLGSYQNRLEAAADTISQAAI 221
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
E ++ D D+A+E R + + Q + + + I
Sbjct: 222 NTEAARAQVRDTDIAAEMARQTGSAIRMQSVIAVQAQATQISEHI 266
>gi|222149358|ref|YP_002550315.1| flagella associated protein [Agrobacterium vitis S4]
gi|221736342|gb|ACM37305.1| flagella associated protein [Agrobacterium vitis S4]
Length = 319
Score = 63.6 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 51/116 (43%)
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
++ G ++ M+ + + T A+ +G+ +RI D
Sbjct: 203 MNVGSQTPAAPTAAEIAISDDTSNAQIDAMIGATQSILSSITDASAAVGATQNRISNSSD 262
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+K ++D +GRL DADM E+T+LSA Q QL +LSI N+ + LF
Sbjct: 263 LMKDLQDTATVSIGRLTDADMEEEATKLSAQSVQSQLQTASLSIANSQQKSLAQLF 318
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 58/140 (41%), Positives = 85/140 (60%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M S+ N ++ SA L + LE Q +V++G +V DA+DNAAYWSIA MKSD+ +L
Sbjct: 1 MDSVSINSTSASALSLLSGSSKALEATQTKVATGKKVDDASDNAAYWSIATTMKSDSLSL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S+ DA L ++ D A G+ +A ++S I+ K+ A G + +I EI+QL+ QL
Sbjct: 61 SSAEDATALSAAVSDTAALGLEQATGLVSDIQAKLIASKAAGANKGAINDEISQLKDQLS 120
Query: 121 DIARGSSFNGENWLRTDLGS 140
+A+ SSFNG+NWL D
Sbjct: 121 TVAQSSSFNGQNWLALDANQ 140
>gi|170694401|ref|ZP_02885555.1| flagellar hook-associated protein 3 [Burkholderia graminis C4D1M]
gi|170140824|gb|EDT08998.1| flagellar hook-associated protein 3 [Burkholderia graminis C4D1M]
Length = 407
Score = 63.6 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 57/435 (13%), Positives = 117/435 (26%), Gaps = 47/435 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + D L + ++SSG+ +S +DN + A + S L+
Sbjct: 3 ISSTQYFTMNVATMSDQQAQLSQLYAQISSGVSLSTPSDNPLGAAQAVQLSSTATTLAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ + + + + DV+ + + + D SI +E+ L+SQL
Sbjct: 63 TSNQNTALASLQLESTTLGSVTDVLQKVHTLVLNAGDGALNNGDRGSIATELQSLRSQLM 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G S+ S D G + D +L + S
Sbjct: 123 TLANATDPQGNYLFAGYQSSAQPYNTNSAGVVTYSGDTGIPAVQITDSHLVQTSDNGTSI 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G VS+ + + + + + +S +
Sbjct: 183 FSSVAPIGTSSVPAGAAANTGTGVIGTVSLNNPTDPTNNNTYSINFSSSTTYTVSQTDPA 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ P A A + S +P
Sbjct: 243 TGAVTTSGPQAFTAGSAITLGGQSVTISGAP----------------------------- 273
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
D+ S T ++ + + + TL + + A
Sbjct: 274 ---------------NAGDSFSVTPATQGSMDVFANLSQLISTLQSPISGGASTASYQSA 318
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ++ ++ I A +G S + + + + L DM
Sbjct: 319 LVTSMTQLENTINNVVTATATVGGRSQEVQALQKVTQNNTLQTASNLSDLTQTDMIKTVG 378
Query: 421 RLSALQTQQQLAVQA 435
+ + Q A QA
Sbjct: 379 KYTLAQNAFDTAQQA 393
>gi|167034936|ref|YP_001670167.1| flagellar hook-associated protein FlgL [Pseudomonas putida GB-1]
gi|166861424|gb|ABY99831.1| flagellar hook-associated protein 3 [Pseudomonas putida GB-1]
Length = 520
Score = 63.2 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 48/413 (11%), Positives = 111/413 (26%), Gaps = 3/413 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T +++ ++ D+++SG+R+ AAD+ + +++ L
Sbjct: 3 ISTAQFYEASASSYSKNFSSMNKTNDQITSGIRIQTAADDPVGAARLLLLQQQQALLDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S I S+ + ++ +S D M +D +I +E+ ++++ +
Sbjct: 63 SGNINTVSNSLLQEESVLSTINDAMQRASELAIRAGGAGVTDSDRTAISTELKEIEANIF 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ NG+ ++ + S D ++ + D S
Sbjct: 123 GLLNSRDANGDYMFGGSKSTTPPYVRNSDGTYSYHGDQTQLSLQVSDTLNLATNDTGFSI 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D + + + + +S + + + A T
Sbjct: 183 FDSASNKSRTQSTLLVPATDDGVVGVSSGLMTSSTSYNNSFTAGQPYKLTFTSATQYTIT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A G T + + G A + S+ +
Sbjct: 243 DANGRDVTSETPTNGTFDSKTEGANRIALRGVEFEITVTLEEGADADAAVAGREFSLEAR 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
P N+T + + + S T ++ + T
Sbjct: 303 PDSFNATRNGNNTSSAQITSSSVTDEAAYRSTFPSNGAVIKFTGPGAYELYAQPLTADSK 362
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+F + A GS + V + + +L A
Sbjct: 363 AIATGTFTAPSLTVAGVTYQVAGSPEAGDQFAVTANTHQNQNVLETISQLRAA 415
Score = 37.8 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 41/314 (13%), Positives = 92/314 (29%), Gaps = 5/314 (1%)
Query: 137 DLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
G T+S + + + + T D + S T +
Sbjct: 209 SSGLMTSSTSYNNSFTAGQPYKLTFTSATQYTITDANGRDVTSETPTNGTFDSKTEGANR 268
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
V +I V++ + + + + + A I
Sbjct: 269 IALRGVEFEITVTLEEGADADAAVAGREFSLEARPDSFNATRNGNNTSSAQITSSSVTDE 328
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
AA +T ++G+ A + +A + T+ +V +
Sbjct: 329 AAYRSTFPSNGAVIKFTGPGAYELYAQPLTADSKAIATGTFTAPSLTVAGVTYQVAGSPE 388
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
D + T ++ ++ L+ A K A ++ + + +
Sbjct: 389 AGDQFAVTANTHQNQNVLETISQLRAALDTPVTGAGSANALKDAAASAIANLASAREQVD 448
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
G IG+ + + +Q + A + + + DM+ + L+ Q + + A
Sbjct: 449 ITRGSIGARGNSLEIQRQENTSLGLANKTTQNAIGNTDMSQAAITLTLQQAMLEASQLAF 508
Query: 437 SIVNNSTARILSLF 450
S ++ LSLF
Sbjct: 509 SRISQ-----LSLF 517
>gi|41019216|gb|AAR98527.1| FliC [Pseudomonas syringae pv. phaseolicola]
Length = 69
Score = 63.2 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 31/67 (46%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
++ TN ++++ + L + L R+SSGL+++ A D+AA IA + S +
Sbjct: 3 LTVNTNVASLNVQKNLGRASDALSTSMTRLSSGLKINSAKDDAAGLQIATKITSQIRGQT 62
Query: 62 AVSDAIG 68
Sbjct: 63 MAIKNAN 69
>gi|224825784|ref|ZP_03698888.1| flagellar hook-associated protein 3 [Lutiella nitroferrum 2002]
gi|224602008|gb|EEG08187.1| flagellar hook-associated protein 3 [Lutiella nitroferrum 2002]
Length = 303
Score = 63.2 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/285 (11%), Positives = 83/285 (29%), Gaps = 5/285 (1%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
++MSA ++ N L +Q ++SSG R+ +D+ ++ + AL+ D I
Sbjct: 9 QASMSA--AMQSANSRLADLQQQMSSGDRLLVPSDDPVASVRLLRLQREEAALTQYRDNI 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLRDIAR 124
S++ + ++ + M ++ + G D +++ S + L+ L A
Sbjct: 67 AALRSRLSMNESYLDGMSKDMMQARDLLVWAADGGNTADDLRAMSSSLANLRDSLFYAAN 126
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
G ++ + + R T + + +
Sbjct: 127 TKDQEGRYLFSGTASATQTIAVDNTQPAGSRYSFSGNTDRQQVVIGHGVTQPANVTLEDM 186
Query: 185 ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKG 244
+ ++ L + SV G + + +
Sbjct: 187 AAFLNQLDQTIDTLQSPTLDPGNPSVGQTVRQTLDGTDTALKAIGVKIAQLGGAQNTLQM 246
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
+ + A G S+ ++ + + S
Sbjct: 247 MDDNHSNVSLANQQSIANLGNLDYAEASINMNSYLLAVQASQKAY 291
Score = 46.3 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 26/225 (11%), Positives = 66/225 (29%), Gaps = 5/225 (2%)
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
+ A A L A ++ + + + Y+ G +
Sbjct: 81 DGMSKDMMQARDLLVWAADGGNTADDLRAMSSSLANLRDSLFYAANTKDQEGRYLFSGTA 140
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
N+ + Y+ S + +D+ ++ +
Sbjct: 141 SATQTIAVDNTQPAGSRYSFSGNTDRQQVVIGHGVTQPANVTLEDMAAFLNQLDQTIDTL 200
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ + + + + + DT +K ++G + + + +D + A ++
Sbjct: 201 QSPTLDPGNPSVGQTVRQTLDGTDTALKAIGVKIAQLGGAQNTLQMMDDNHSNVSLANQQ 260
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ L + D A S +++ Q + +A LSLF
Sbjct: 261 SIANLGNLDYAEASINMNSYLLAVQASQKAY-----GKISALSLF 300
>gi|307087692|gb|ADN26823.1| flagellin [uncultured Borrelia sp.]
Length = 249
Score = 63.2 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 37/103 (35%), Gaps = 3/103 (2%)
Query: 48 SIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---D 104
+A + S LS S + + + +++ V+ +K D
Sbjct: 1 GVAGKLNSQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRMKEXAVQSGNGTYSDSD 60
Query: 105 SKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
SIQ EI QL ++ IA + +N + L + A+
Sbjct: 61 RGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSAAQNVKTAE 103
Score = 45.1 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 13/130 (10%), Positives = 33/130 (25%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G+ W + + N A V N ++
Sbjct: 120 GSQASWTLRVHVGANQDEAIAVNIYAANVANLFNGEGAQAAPAQEGAQQEGVQAVPAPAA 179
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + +S I+ I+ T +G+ +R+ + +
Sbjct: 180 APVQGGVNSPINVTTAIDANMSLSKIEDAIRMVTDQRANLGAFQNRLESVKASTDYAIEN 239
Query: 403 VEKGVGRLVD 412
++ ++ D
Sbjct: 240 LKASYAQVKD 249
>gi|149908752|ref|ZP_01897413.1| flagellar hook-associated protein [Moritella sp. PE36]
gi|149808294|gb|EDM68233.1| flagellar hook-associated protein [Moritella sp. PE36]
Length = 288
Score = 63.2 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 16/193 (8%), Positives = 51/193 (26%), Gaps = 3/193 (1%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDI 76
+ + + + +SG R+ +D+ ++++ L + I +
Sbjct: 4 MERGASSFSHISQQQASGKRIIKPSDDPLGTVKLMALQAEQANLKQFNTNIENARRHLSG 63
Query: 77 AKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLRDIARGSSFNGENW 133
A+ ++ D + +++ K+I E+ ++ L + NG+
Sbjct: 64 AETYVTSISDQLGKLRDLTLEAGNGTLTPAGRKAIAQEMEAVKESLLASSNAKGSNGKYL 123
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
+ + + +D + ++
Sbjct: 124 FSGSEVAKAPIAGPDPVTGDYTYVGDNSERKITIASGVKVVSNIDVEETFFDGGKDFFKD 183
Query: 194 HKIKVEPQVLKDI 206
+E
Sbjct: 184 LDGYIEKLNTDSQ 196
>gi|283954958|ref|ZP_06372469.1| flagellin [Campylobacter jejuni subsp. jejuni 414]
gi|283793544|gb|EFC32302.1| flagellin [Campylobacter jejuni subsp. jejuni 414]
Length = 67
Score = 63.2 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 27/66 (40%)
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTAR 445
+++ + + I + + V+ + D D A+ES S Q A+S N
Sbjct: 2 QNQLQVTINNITVTQVNVKAAESTIRDVDFAAESANFSKYNILAQSGSYAMSQANAVQQN 61
Query: 446 ILSLFR 451
+L L +
Sbjct: 62 VLKLLQ 67
>gi|257871324|ref|ZP_05650977.1| flagellin [Enterococcus gallinarum EG2]
gi|257805488|gb|EEV34310.1| flagellin [Enterococcus gallinarum EG2]
Length = 306
Score = 63.2 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/176 (10%), Positives = 57/176 (32%), Gaps = 2/176 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + + L ++ +++SS VS ++DN S +
Sbjct: 3 ISNSITYNDFLRNLGTNASKVQSTLNQLSSLKEVSKSSDNPLLVSKIMDLNVSLNQNKTY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI- 122
++ I S + + M I++ + + S+ + + ++++ ++ I
Sbjct: 63 NNTIKDSISWTKAQDSALESVSTSMLRIRSLVQSSANATAGSEELGANRSEIEQEIEGIV 122
Query: 123 -ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ ++F+G ++ + + + +V L
Sbjct: 123 ESLNTNFDGRYLFSGTNTTTAPFEIVKKNDAIVGIKYNGSSEDLPREIANGVSVDL 178
Score = 44.3 bits (102), Expect = 0.035, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 25/71 (35%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ D +IG++ +R+ D + + + + + D D+A +
Sbjct: 222 LTAHDQHATNVVNVRAQIGTLYNRLEAAADRNETEKLNLTETLSNKQDVDIAEKYMEYQN 281
Query: 425 LQTQQQLAVQA 435
T + +
Sbjct: 282 QMTAYRSTLAM 292
>gi|153831579|ref|ZP_01984246.1| flagellar hook-associated protein 3 [Vibrio harveyi HY01]
gi|148872089|gb|EDL70906.1| flagellar hook-associated protein 3 [Vibrio harveyi HY01]
Length = 299
Score = 63.2 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 53/143 (37%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + Q L+ N L V ++++G R++ +D+ ++ +N A+
Sbjct: 3 ISDSQFSQMMLQSLQTNNAGLGHVLQQMATGDRLTKLSDDPMASIKLLNLERENSAIGQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + + ++++ + G + I +L+S I
Sbjct: 63 QSNIANLKTTLSAQETHLDSVNESLKSVRDLVLWGANGTLTDEDRSGMIIELKSYRDSIE 122
Query: 124 RGSSFNGENWLRTDLGSSTASIA 146
+ E G+ T + A
Sbjct: 123 SSFNAQDEEGHYLFSGTQTDTPA 145
>gi|257866413|ref|ZP_05646066.1| flagellin [Enterococcus casseliflavus EC30]
gi|257873071|ref|ZP_05652724.1| flagellin [Enterococcus casseliflavus EC10]
gi|325567495|ref|ZP_08144162.1| flagellin family protein [Enterococcus casseliflavus ATCC 12755]
gi|257800371|gb|EEV29399.1| flagellin [Enterococcus casseliflavus EC30]
gi|257807235|gb|EEV36057.1| flagellin [Enterococcus casseliflavus EC10]
gi|325158928|gb|EGC71074.1| flagellin family protein [Enterococcus casseliflavus ATCC 12755]
Length = 306
Score = 63.2 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/176 (10%), Positives = 57/176 (32%), Gaps = 2/176 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + + L ++ +++SS VS ++DN S +
Sbjct: 3 ISNSITYNDFLRNLGTNASKVQSTLNQLSSLKEVSKSSDNPLLVSKIMDLNVSLNQNKTY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI- 122
++ I S + + M I++ + + S+ + + ++++ ++ I
Sbjct: 63 NNTIKDSISWTKAQDSALESVSTSMLRIRSLVQSSANATAGSEELGANRSEIEQEIEGIV 122
Query: 123 -ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ ++F+G ++ + + + +V L
Sbjct: 123 ESLNTNFDGRYLFSGTNTTTAPFEIVKENDAIVGIKYNGTSEDLPREIANGVSVDL 178
Score = 44.3 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 25/71 (35%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ D +IG++ +R+ D + + + + + D D+A +
Sbjct: 222 LTAHDQHATNVVNVRAQIGTLYNRLEAAADRNETEKLNLTETLSNKQDVDIAEKYMEYQN 281
Query: 425 LQTQQQLAVQA 435
T + +
Sbjct: 282 QMTAYRSTLAM 292
>gi|218549189|ref|YP_002382980.1| flagellar hook-associated protein FlgL [Escherichia fergusonii ATCC
35469]
gi|218356730|emb|CAQ89358.1| flagellar hook-filament junction protein [Escherichia fergusonii
ATCC 35469]
gi|324113878|gb|EGC07852.1| flagellar hook protein 3 [Escherichia fergusonii B253]
gi|325497609|gb|EGC95468.1| flagellar hook-associated protein FlgL [Escherichia fergusonii
ECD227]
Length = 317
Score = 63.2 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/197 (12%), Positives = 53/197 (26%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + +++S+G RV + +D+ S A ++ +
Sbjct: 3 ISTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVINPSDDPIAASQAVVLSQAQAQNNQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ A + KV + + +S+ + + KI S T LQ +
Sbjct: 63 ALARTFATQKVSLEENVLSQVTTALQNAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N G T + + D D
Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQASGEYNGGKESITQQVDASRSMVIGHTGDKIFDH 182
Query: 184 TERYGLLDRNHKIKVEP 200
+ + +
Sbjct: 183 FTSNAIPEPAGSTQETN 199
>gi|2576257|emb|CAA75363.1| flagellin [Borrelia burgdorferi]
Length = 168
Score = 63.2 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 10/106 (9%), Positives = 34/106 (32%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 63 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 122
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+ + + ++ ++ DA M E + Q A+ ++
Sbjct: 123 NSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSAMAMIAQA 168
>gi|303238573|ref|ZP_07325107.1| flagellin domain protein [Acetivibrio cellulolyticus CD2]
gi|302593971|gb|EFL63685.1| flagellin domain protein [Acetivibrio cellulolyticus CD2]
Length = 273
Score = 63.2 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 58/145 (40%), Gaps = 6/145 (4%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N+ A A++ L+ + + ++ S + AAD +I++ + L S
Sbjct: 5 NNMAFRATKGLKVNQSDKKGSVEKFSD-TSTNGAADE--KLNISEENRGQIKELQKSSSN 61
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIA 123
I G S + A++ + + + T + I + + +IQ +IT+L + IA
Sbjct: 62 IQNGISLIQTAESALEETYKKLQTARELIVNASNQENIPSERAAIQKKITKLNDDINKIA 121
Query: 124 RGSSFNGENWLRTDLGSSTASIAKS 148
+ FN L D + + +
Sbjct: 122 ANTEFNSRKLLAGDESVEFYTGSNN 146
Score = 47.8 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 32/91 (35%), Gaps = 2/91 (2%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ ++ + ID I+ + KI ++ R+ ++ G + D+ MA E+
Sbjct: 184 SSDQQIRIIDKSIEDVSTEKEKISAVKDRLKETIK--STETESTTAKDGFIEDSAMAQET 241
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLF 450
Q + + N S L L
Sbjct: 242 LASYKKNALFQPSTTMQAQSNQSKLAALQLL 272
>gi|146341923|ref|YP_001206971.1| putative flagellin protein, C-terminus [Bradyrhizobium sp. ORS278]
gi|146194729|emb|CAL78754.1| Putative flagellin protein, C-terminus [Bradyrhizobium sp. ORS278]
Length = 517
Score = 63.2 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 72/207 (34%)
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
+ + + AA + A N +T
Sbjct: 311 TTNDAASATIGTIGGTAAASSQSFNGLTAAAPVADSTAQTQRSNLVAQYNNVLTQINLTA 370
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
+ N + T ++ K ++ L ++ + + + + ++
Sbjct: 371 SDASFNGVNLLNGDTLKLTFNENGKSTLSITGVTFNTGGLGLSTLTSGTDFLDNNSANKV 430
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ + T A +GS S + +++DF K + + ++ G L AD E+ A
Sbjct: 431 IGLLTTASSTLRNEASTLGSNLSVVQIRQDFNKNLINVLQTGSSNLTLADTNEEAANSQA 490
Query: 425 LQTQQQLAVQALSIVNNSTARILSLFR 451
L T+Q +AV ALS+ N S A +L L R
Sbjct: 491 LSTRQSIAVSALSLANQSQASVLQLLR 517
Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ I+ + S L+ L Q+ +S+G +V+ A DN + AQ + + +
Sbjct: 3 MSGIVLSASVRQNLLSLQSTAQLLATTQNNLSTGKKVNSALDNPTNFFTAQGLDNRASDI 62
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQS 117
+ + D IG G + A G++ ++ + K+ ++ + S + S
Sbjct: 63 NNLLDGIGNGVQVLQAANTGITSLQKLVDSAKSIANQVLQSAVGYSTKSSVTSAALS 119
>gi|77457734|ref|YP_347239.1| flagellar hook-associated protein FlgL [Pseudomonas fluorescens
Pf0-1]
gi|77381737|gb|ABA73250.1| putative flagellar hook-associated protein 3 [Pseudomonas
fluorescens Pf0-1]
Length = 523
Score = 63.2 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 41/329 (12%), Positives = 93/329 (28%), Gaps = 4/329 (1%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A A+Q R+ + + + SS R++ AAD+ + L I
Sbjct: 10 ATQAAQYQRNYSKTVATANE-ASSLQRINTAADDPIGAGRLLKLGQQAAMLEQYKGNIDT 68
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLRDIARGS 126
S + + ++ ++ ++ K G+ TD K+ +E+TQ+Q Q+ +
Sbjct: 69 TKSSLTVQESTLTSITTALARAKEIGLAANNGIATDTDRKAYAAELTQIQQQVLGLMNSK 128
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
NG + + D ++ + D + T
Sbjct: 129 DANGNYLFSGSKTDTAPYSQNADGTYTYNGDQTQINLGIGDGLSVATNTTGWDAFQQTIN 188
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+ + + + T + K + ++ + A G
Sbjct: 189 TARTQTSMTAPAVDDGRVVLTNGIVGTAATYNAKFTAGQPYTVDFISSTQIKITDALGND 248
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
+ + + S ++ G+++ + S + +
Sbjct: 249 VTTEASQNGAITNSNGANQTVSFRGVDLKLNINLKPGDTNPDAVIAGHSFQLSATPDSFT 308
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
+V GN V T S +
Sbjct: 309 SVRSPGNPSTAVITGSNVTNQAAYNGAFP 337
Score = 53.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 43/346 (12%), Positives = 88/346 (25%)
Query: 97 AGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRD 156
+ T + Q I ++Q A +G++ AK G
Sbjct: 172 SVATNTTGWDAFQQTINTARTQTSMTAPAVDDGRVVLTNGIVGTAATYNAKFTAGQPYTV 231
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
D I L + S ++ + L
Sbjct: 232 DFISSTQIKITDALGNDVTTEASQNGAITNSNGANQTVSFRGVDLKLNINLKPGDTNPDA 291
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ + + + + + + + T A SG + A +
Sbjct: 292 VIAGHSFQLSATPDSFTSVRSPGNPSTAVITGSNVTNQAAYNGAFPSGGGAVLKFTSATA 351
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ ++ + + T A G + + + +
Sbjct: 352 FDLYAAPVTADSKPVSSGTVVGGNATAAGVTFAIGGTPAAGDQFSIQSNNHQTQNVLDTL 411
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ AME + I++ +A IG+ + Q
Sbjct: 412 GQMVTALNTPIDGDPVAKQKFQGAMESALGNIESAANQIGSAVTSIGARGQSLDEQTTTN 471
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNS 442
+ + A G + D+D A TRL+ QT Q + A S ++
Sbjct: 472 ETLIQANTTTQGSIRDSDPAEVMTRLTLQQTMLQASQLAFSKISQL 517
>gi|269960123|ref|ZP_06174499.1| flagellar hook-associated protein 3 [Vibrio harveyi 1DA3]
gi|269835094|gb|EEZ89177.1| flagellar hook-associated protein 3 [Vibrio harveyi 1DA3]
Length = 299
Score = 63.2 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 53/143 (37%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + Q L+ N L V ++++G R++ +D+ ++ +N A+
Sbjct: 3 ISDSQFSQMMLQSLQTNNAGLGHVLQQMATGDRLTKLSDDPMASIKLLNLERENSAIGQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + + ++++ + G + + +L+S I
Sbjct: 63 QSNIANLKTTLSAQETHLDSVNESLKSVRDLVLWGANGTLTDEDRSGMVIELKSYRDSIE 122
Query: 124 RGSSFNGENWLRTDLGSSTASIA 146
+ E G+ T + A
Sbjct: 123 SSFNAQDEEGHYLFSGTQTDTPA 145
>gi|257876026|ref|ZP_05655679.1| flagellin [Enterococcus casseliflavus EC20]
gi|257810192|gb|EEV39012.1| flagellin [Enterococcus casseliflavus EC20]
Length = 306
Score = 63.2 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 19/176 (10%), Positives = 57/176 (32%), Gaps = 2/176 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + + L ++ +++SS VS ++DN S +
Sbjct: 3 ISNSITYNDFLRNLGTNASKVQSTLNQLSSLKEVSKSSDNPLLVSKIMDLNVSLNQNKTY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI- 122
++ I S + + M I++ + + S+ + + ++++ ++ I
Sbjct: 63 TNTIKDSISWTKAQDSALESVSTSMLRIRSLVQSSANATAGSEELGANRSEIEQEIEGIV 122
Query: 123 -ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ ++F+G ++ + + + +V L
Sbjct: 123 ESLNTNFDGRYLFSGTNTTTAPFEIVKENDAIVGIKYNGTSEDLPREIANGVSVDL 178
Score = 44.3 bits (102), Expect = 0.035, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 25/71 (35%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ D +IG++ +R+ D + + + + + D D+A +
Sbjct: 222 LTAHDQHATNVVNVRAQIGTLYNRLEAAADRNETEKLNLTETLSNKQDVDIAEKYMEYQN 281
Query: 425 LQTQQQLAVQA 435
T + +
Sbjct: 282 QMTAYRSTLAM 292
>gi|159171925|gb|ABW96219.1| FlaC [Vibrio harveyi]
Length = 192
Score = 63.2 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 21/56 (37%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+E V+ ID +K + +G+ +R + + + + V R+
Sbjct: 136 VTTVAGSQEAVAVIDGALKSVDSQRASLGAFQNRFNHAISNLDNINENVNASKSRI 191
>gi|289679011|ref|ZP_06499901.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
syringae FF5]
Length = 392
Score = 62.8 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/344 (11%), Positives = 95/344 (27%), Gaps = 3/344 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + + NL + VSSG++++ A D+ + + N L+
Sbjct: 3 ISTTQFFESTNTNYQRNYSNLNKTSEEVSSGIKLNTAGDDPVGAARVLQLAQQNSMLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
IG ++ V + ++ ID M + +I + +D + S + Q QSQ+
Sbjct: 63 ETNIGTINTNVVTTETTLTSIIDTMQAAREQIVSAGSGAFTDSDRLAKASALKQYQSQIL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ NG+ S+ + + D V + D + +
Sbjct: 123 GLMNSQDPNGQYIFSGSKASTPPYAQNADGSYSYKGDQTSVNLAVGDGLVMASNTTGFEA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + ++ T + + +L
Sbjct: 183 FEQSVNTTRTSATLLSPATDDGKIGLSGGLVTSTPTYNASYQGGEPYTLTFLSGTQFKIT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A G + + + + + + A + S
Sbjct: 243 DASGTDVSSDTSSGGKFSHGSFDAQTFTFRGVEMTLNVNLPAADRVSDATADAALTNRSY 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTL 344
+ + T + + + + + + +
Sbjct: 303 QLASTPDSVSTARSAGNTSTATVSSSAVGNTAADRAAFNNTFPT 346
>gi|218660793|ref|ZP_03516723.1| flagellin C protein [Rhizobium etli IE4771]
Length = 52
Score = 62.8 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/51 (64%), Positives = 43/51 (84%)
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D+++ G+GRLVDADM ES++LSALQTQQQL +Q+LSI N+S IL+LFR
Sbjct: 1 DSIDSGIGRLVDADMEEESSKLSALQTQQQLGIQSLSIANSSAQNILTLFR 51
>gi|254459199|ref|ZP_05072621.1| flagellin B [Campylobacterales bacterium GD 1]
gi|207084092|gb|EDZ61382.1| flagellin B [Campylobacterales bacterium GD 1]
Length = 70
Score = 62.8 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 34/66 (51%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN AM+A + N LE + +SSGLR++ +AD++A +I+ + + + AL
Sbjct: 5 INTNIGAMNAHRNATMNNVGLEKSLNSLSSGLRINKSADDSAGMAISSKLTAQSQALGQA 64
Query: 64 SDAIGL 69
Sbjct: 65 IRNAND 70
>gi|327478816|gb|AEA82126.1| flagellar hook-associated protein FlgL [Pseudomonas stutzeri DSM
4166]
Length = 302
Score = 62.8 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 53/144 (36%), Gaps = 4/144 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M +AM L + + L + +++SG R+ +D+ ++ + +L
Sbjct: 1 MRISNAQITAMM-HGSLNNSSEKLGKLMQQMASGQRMLVPSDDPISAVRVLRIQREEASL 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQS 117
+ I S + +A + A D M +I++ G G D +I +E+ L++
Sbjct: 60 TQYRTNIANVSGNLSKQEANLKAASDSMLSIRDLLLWAANGSNTGEDLSAIANELESLEN 119
Query: 118 QLRDIARGSSFNGENWLRTDLGSS 141
+ A G +
Sbjct: 120 TVLSFANVRDEEGRYLFSGTRSNQ 143
>gi|148258441|ref|YP_001243026.1| hypothetical protein BBta_7243 [Bradyrhizobium sp. BTAi1]
gi|146410614|gb|ABQ39120.1| hypothetical protein BBta_7243 [Bradyrhizobium sp. BTAi1]
Length = 578
Score = 62.8 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 43/98 (43%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ ++ +S + + A GS + I ++ F K M + ++ G L A
Sbjct: 481 NFATNDEVKTALSQLMNASSTLRSQASTFGSNLTVIQNRQAFTKNMINILDVGANNLTIA 540
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D+ E+ +AL + L + ALS+ N + IL L R
Sbjct: 541 DLNEETANQNALSLRNSLGISALSLANQAQQGILQLLR 578
Score = 54.7 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 42/96 (43%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I + + L+D L Q R+S+ +V+ A DN + AQ M + + L
Sbjct: 15 SEITLSAATRQNLLSLQDTASLLATTQSRLSTQKKVNSALDNPVNYFAAQSMTARSADLM 74
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA 97
++ D I G + A G+++ ++ + K+
Sbjct: 75 SLMDGISNGIQTIQAANQGITRIQGLVDSAKSTAQQ 110
>gi|323527705|ref|YP_004229858.1| flagellar hook-associated protein 3 [Burkholderia sp. CCGE1001]
gi|323384707|gb|ADX56798.1| flagellar hook-associated protein 3 [Burkholderia sp. CCGE1001]
Length = 407
Score = 62.8 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/423 (12%), Positives = 112/423 (26%), Gaps = 47/423 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + D L + +SSG+ +S +DN + A + S +L+
Sbjct: 3 ISSTQYFTMNVATMSDQQAQLSQLYAEISSGVSLSTPSDNPLGAAQAVQLSSTATSLAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ + + + + + +V+ +I + G D SI +E+ L+SQL
Sbjct: 63 TSNQNTALASLQLEDSTLGSVNNVLQSIHTLVLRAGDGSLNNGDRGSIATELQSLRSQLM 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G S+ S D G + ++ +
Sbjct: 123 TLANATDPQGNYLFAGYQSSAQPYNTNSAGVVTYSGDTGTPAVQITGSHVVQTGDNGLAI 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G VS+ + + + + + TS +
Sbjct: 183 FGSVAPIGTSAVPAAAAGNTGTGVISTVSLNNPTNPANADTYSIDFTSSTTYTVSQTDPA 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ P A A S S +P
Sbjct: 243 TGAVTTSGPQAFTAGSAITLGGQSISISGAP----------------------------- 273
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
D+ S T ++ + + + TL + + A
Sbjct: 274 ---------------NAGDSFSVTPATQGSMDVFANLSQLISTLQSPVSGGASTASLQSA 318
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ++ ++ + A +G I + + + L DM
Sbjct: 319 LVTSMAQLENTMNNVVTAQATVGGREQEIQALQTVTQANTLQTSSNLSDLTQTDMIKTVG 378
Query: 421 RLS 423
+ +
Sbjct: 379 KYT 381
>gi|260597452|ref|YP_003210023.1| flagellar hook-associated protein FlgL [Cronobacter turicensis
z3032]
gi|260216629|emb|CBA29930.1| Flagellar hook-associated protein 3 [Cronobacter turicensis z3032]
Length = 320
Score = 62.8 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 59/163 (36%), Gaps = 3/163 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + D +++S+G RV+ +D+ + A ++
Sbjct: 3 ISTQMMYQQNMRGITDSQSTWLKYGEQMSTGKRVNRPSDDPIAAAQAVVLSQAQAQNEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ A + KV + + +S+ V+++ + KI TD S+ +++ ++ QL
Sbjct: 63 TQARTFATQKVSLESSVLSQVTSVITSAQEKIVYANNGTLSDTDRASVATDLQGMRDQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
++A + NG + ++ Q
Sbjct: 123 NLANSTDGNGRYIFAGYKTDAAPFSGTPGNVTYNGGTENITQQ 165
>gi|78099741|gb|ABB20893.1| flagellin protein [Borrelia persica]
Length = 185
Score = 62.8 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 13/129 (10%), Positives = 40/129 (31%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ V + +++ + + + + ++ I+
Sbjct: 54 INIYAANVSNLFSGEGAQQATQNQEGVQPAAAAPIQGGINSPVNVTTAVDANVSLTKIED 113
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
I+ T +G+ +R+ + + + ++ ++ DA M E + Q
Sbjct: 114 AIRMVTDQRANLGAFQNRLESIKSSTEYAIENLKSSYAQIKDAQMTDEIVASTTNSILTQ 173
Query: 431 LAVQALSIV 439
A+ +S
Sbjct: 174 SAMAMISQA 182
>gi|145845981|gb|ABP96980.1| flagellin [Cronobacter sakazakii]
Length = 189
Score = 62.5 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 48/135 (35%), Gaps = 3/135 (2%)
Query: 51 QIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KS 107
M S ++ + G S V A+ +++ + I+ S S
Sbjct: 1 NRMTSQVKGMTQAARNANDGISLVQTAEGNLNEINTNLQRIRELAVQAANDTNGSSDLTS 60
Query: 108 IQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTID 167
+ +EITQ +++ IA G++FNG+ L + SS + + + G +
Sbjct: 61 VNTEITQRLAEIDRIAGGANFNGKKLLDGSVTSSLNIQVGAGVSANDTIGIGSNALINAT 120
Query: 168 YYLDPETVLLDSSTD 182
+ S +
Sbjct: 121 SGSLDTNLKTTISDN 135
>gi|209521597|ref|ZP_03270295.1| flagellar hook-associated protein 3 [Burkholderia sp. H160]
gi|209497980|gb|EDZ98137.1| flagellar hook-associated protein 3 [Burkholderia sp. H160]
Length = 408
Score = 62.5 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/432 (9%), Positives = 100/432 (23%), Gaps = 41/432 (9%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + D L + +SSG ++ ADN + A + S ALS
Sbjct: 3 ISTAQYFSMNVSTMSDQQAQLSQIYQEISSGQSLTTPADNPLGAAQAVQLSSTAAALSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
S S + + ++ I + + + + + + QL + +
Sbjct: 63 STNQTTALSSLRAEDSTLTSVITTLQSANTLGLSVGSGTLNDTNRSAIAAQLTTLRDQLL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ + G ++ A + + +G T+ + D+
Sbjct: 123 TYANATDGSGNAMFAGFQNSTKAFTTNAAGTVVYSGDTGTRTVQVTDSNSVAIGDNGMSV 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
G + + + +T + ++
Sbjct: 183 FMSVGATNAEPIASGSSSNTGTGVIGPVTVTNPTNTANADSYQIQFSGSGSSLTYTVTDT 242
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ T G + + +
Sbjct: 243 TTGVAGTAQTYTSGSNITVGGQTVDITGT------------------------------- 271
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + A + AM
Sbjct: 272 ----------PAANDTFTVQPANKAGTNVFANLNAMITALQQPVTGNDAAAATLQNAMNT 321
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+S + + TA +G + + + + L DM ++ +
Sbjct: 322 GLSQLANTLNNITAVQASVGGREQEVEALQTVTQTNSTQTASNLADLTSTDMTKTISKYT 381
Query: 424 ALQTQQQLAVQA 435
Q Q + QA
Sbjct: 382 LTQEALQASQQA 393
>gi|284801036|ref|YP_003412901.1| flagellar hook-associated protein FlgL [Listeria monocytogenes
08-5578]
gi|284994178|ref|YP_003415946.1| flagellar hook-associated protein FlgL [Listeria monocytogenes
08-5923]
gi|284056598|gb|ADB67539.1| flagellar hook-associated protein FlgL [Listeria monocytogenes
08-5578]
gi|284059645|gb|ADB70584.1| flagellar hook-associated protein FlgL [Listeria monocytogenes
08-5923]
Length = 291
Score = 62.5 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/218 (13%), Positives = 66/218 (30%), Gaps = 3/218 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A S +L +++ NL Q +VSSG + ++N + L+
Sbjct: 3 ISTNQQASSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQLNRE 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLR 120
+ S ++ A+ +S M+ + + + +D ++ EI L L
Sbjct: 63 KTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTSDKDNMSQSAEEIKGLLDVLI 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + + + K+ + D +
Sbjct: 123 SVANSEDDGRYVFSGSSTSVKPFTTDKTTGEIIYSGTTENKKFRVTDTLEVEVFHDGSAM 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
TD + K + + + + + +
Sbjct: 183 TDVFNNIQKIVDAMKTGDKDALSALQETNSKNIEIITN 220
>gi|293115442|ref|ZP_05791513.2| flagellin [Butyrivibrio crossotus DSM 2876]
gi|292809721|gb|EFF68926.1| flagellin [Butyrivibrio crossotus DSM 2876]
Length = 65
Score = 62.5 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 33/59 (55%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ N +AM++++ L +++SSG +++ AAD+AA SI++ M+ L+
Sbjct: 7 VVQHNLTAMNSNRMLGVTTSKQAKSTEKLSSGYKINRAADDAAGLSISEKMRKQIRGLT 65
>gi|167468934|ref|ZP_02333638.1| flagellin [Yersinia pestis FV-1]
Length = 61
Score = 62.5 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGA 59
M I TN ++ L +L +R+SSGLR++ A D+ +IA S+
Sbjct: 1 MAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDEKRQAIANRFTSNIKG 59
>gi|313610101|gb|EFR85426.1| flagellar hook-associated protein 3 [Listeria monocytogenes FSL
F2-208]
Length = 291
Score = 62.5 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 66/218 (30%), Gaps = 3/218 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A S +L +++ NL Q +VSSG + ++N + L+
Sbjct: 3 ISTNQQANSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQLNRE 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLR 120
+ S ++ A+ +S M+ + + + +D ++ EI L L
Sbjct: 63 KTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTSDKDNMSQSAEEIKGLLDVLI 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + + + K+ + D S
Sbjct: 123 SVANSEDDGRYVFSGSSTSVKPFTTDKTTGEIIYNGTTENKKFRVTDTLEVEVFHDGSSM 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
TD + K + + + + + +
Sbjct: 183 TDVFNNIQKIVDAMKTGDKDALSALQETNSKNIEIITN 220
>gi|170734366|ref|YP_001766313.1| flagellar hook-associated protein FlgL [Burkholderia cenocepacia
MC0-3]
gi|169817608|gb|ACA92191.1| flagellar hook-associated protein 3 [Burkholderia cenocepacia
MC0-3]
Length = 411
Score = 62.5 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 61/179 (34%), Gaps = 3/179 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T ++ D L + ++SSG+ ++ ADN + A + + LS
Sbjct: 3 ISTAQFYQMNVAQMSDQQAQLSQLYQQISSGVSLATPADNPLGAAQAVQLSMTSATLSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ S + + +++++I + + +D ++ +++ + QL
Sbjct: 63 ASNQNAALSSLQKEDQTLISVNNLLNSIHTVVIQAGDGSLSDSDRSALSTQLQGYRDQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A + +G ++ G D G Q+ D + +
Sbjct: 123 TLANSTDGSGNYLFAGFQSATAPFSNAPGGGVAYSGDTGSRQVQIADTRSIAQGDNGAN 181
>gi|16802748|ref|NP_464233.1| flagellar hook-associated protein FlgL [Listeria monocytogenes
EGD-e]
gi|47095272|ref|ZP_00232883.1| flagellar hook-associated protein FlgL, putative [Listeria
monocytogenes str. 1/2a F6854]
gi|224498788|ref|ZP_03667137.1| flagellar hook-associated protein FlgL [Listeria monocytogenes
Finland 1988]
gi|224501989|ref|ZP_03670296.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL
R2-561]
gi|254829363|ref|ZP_05234050.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL
N3-165]
gi|254830303|ref|ZP_05234958.1| flagellar hook-associated protein FlgL [Listeria monocytogenes
10403S]
gi|254900058|ref|ZP_05259982.1| flagellar hook-associated protein FlgL [Listeria monocytogenes
J0161]
gi|254911389|ref|ZP_05261401.1| flagellar hook-protein FlgL [Listeria monocytogenes J2818]
gi|254935716|ref|ZP_05267413.1| flagellar hook-associated protein FlgL [Listeria monocytogenes
F6900]
gi|16410095|emb|CAC98784.1| lmo0706 [Listeria monocytogenes EGD-e]
gi|47016343|gb|EAL07265.1| flagellar hook-associated protein FlgL, putative [Listeria
monocytogenes str. 1/2a F6854]
gi|258601776|gb|EEW15101.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL
N3-165]
gi|258608299|gb|EEW20907.1| flagellar hook-associated protein FlgL [Listeria monocytogenes
F6900]
gi|293589326|gb|EFF97660.1| flagellar hook-protein FlgL [Listeria monocytogenes J2818]
Length = 291
Score = 62.5 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/218 (13%), Positives = 66/218 (30%), Gaps = 3/218 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A S +L +++ NL Q +VSSG + ++N + L+
Sbjct: 3 ISTNQQASSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQLNRE 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLR 120
+ S ++ A+ +S M+ + + + +D ++ EI L L
Sbjct: 63 KTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTSDKDNMSQSAEEIKGLLDVLI 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + + + K+ + D +
Sbjct: 123 SVANSEDDGRYVFSGSSTSVKPFTTDKTTGEIIYNGTTENKKFRVTDTLEVEVFHDGSAM 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
TD + K + + + + + +
Sbjct: 183 TDVFNNIQKIVDAMKTGDKDALSALQETNSKNIEIITN 220
>gi|90423000|ref|YP_531370.1| flagellin [Rhodopseudomonas palustris BisB18]
gi|90105014|gb|ABD87051.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 746
Score = 62.5 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 59/154 (38%), Gaps = 2/154 (1%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ IL+ + L+ L Q R+S+G +V+ A DN + A + S +
Sbjct: 1 MSVILS-SAVRQNLLSLQSTADLLATTQSRLSTGKKVNTALDNPTNFFTASSLDSRASDI 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER-GTDSKSIQSEITQLQSQL 119
+ + D IG G + A G++ ++ + K+ ++ + T +
Sbjct: 60 NNLLDGIGNGVQILQAANTGITSLNKLVDSAKSIANQALQTVSGYTTKSNVSTTIAGATA 119
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
DI +++ + + T+ A + +
Sbjct: 120 DDIRGTTTYANAFAVSGVVTDGTSGGASPITTAT 153
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+ A +GS S + L++DF K + + ++ G L AD E+ AL T+Q +AV A
Sbjct: 671 RSQASALGSNLSIVQLRQDFSKSLINVLQTGASNLTLADTNEEAANSQALSTRQSIAVSA 730
Query: 436 LSIVNNSTARILSLFR 451
LS+ N S +L L R
Sbjct: 731 LSLANTSQQSVLQLLR 746
>gi|47091668|ref|ZP_00229464.1| flagellar hook-associated protein FlgL, putative [Listeria
monocytogenes str. 4b H7858]
gi|217965196|ref|YP_002350874.1| flagellar hook-associated protein 3 [Listeria monocytogenes HCC23]
gi|254824014|ref|ZP_05229015.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL
J1-194]
gi|254853090|ref|ZP_05242438.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL
R2-503]
gi|255521216|ref|ZP_05388453.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL
J1-175]
gi|300764518|ref|ZP_07074511.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL
N1-017]
gi|47019987|gb|EAL10724.1| flagellar hook-associated protein FlgL, putative [Listeria
monocytogenes str. 4b H7858]
gi|217334466|gb|ACK40260.1| flagellar hook-associated protein 3 [Listeria monocytogenes HCC23]
gi|258606439|gb|EEW19047.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL
R2-503]
gi|293593242|gb|EFG01003.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL
J1-194]
gi|300514872|gb|EFK41926.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL
N1-017]
gi|307570245|emb|CAR83424.1| flagellar hook-associated protein 3 [Listeria monocytogenes L99]
gi|328467271|gb|EGF38351.1| flagellar hook-associated protein FlgL [Listeria monocytogenes
1816]
Length = 291
Score = 62.5 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/218 (13%), Positives = 66/218 (30%), Gaps = 3/218 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A S +L +++ NL Q +VSSG + ++N + L+
Sbjct: 3 ISTNQQANSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQLNRE 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLR 120
+ S ++ A+ +S M+ + + + +D ++ EI L L
Sbjct: 63 KTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTSDKDNMSQSAEEIKGLLDVLI 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + + + K+ + D +
Sbjct: 123 SVANSEDDGRYVFSGSSTSVKPFTTDKTTGEIIYNGTTENKKFRVTDTLEVEVFHDGSAM 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
TD + K + + + + + +
Sbjct: 183 TDVFNNIQKIVDAMKTGDKDALSALQETNSKNIEIITN 220
>gi|320354351|ref|YP_004195690.1| flagellar hook-associated protein 3 [Desulfobulbus propionicus DSM
2032]
gi|320122853|gb|ADW18399.1| flagellar hook-associated protein 3 [Desulfobulbus propionicus DSM
2032]
Length = 322
Score = 62.5 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 54/166 (32%), Gaps = 3/166 (1%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDI 76
L + LE ++ ++G ++++ +D+ A + + + +G +
Sbjct: 16 LNTVATQLEELRSIGATGKKLNNPSDDPASIRPVLNTRKQLSNVDRYLETMGKSLDTMQA 75
Query: 77 AKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
+ ++M K +T + D + EI Q++ +L D A G +
Sbjct: 76 TDGHLEHVENIMQRAKEIMTNAINGSLNDADRSVLADEIAQIRKELLDAANGMVGGKYLF 135
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ + + + + + ++ + +
Sbjct: 136 AGYEEDTVPFVTNPAYDPALYDPTDSTTWPYLYQGDENSTSLEITT 181
Score = 42.8 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 35/271 (12%), Positives = 83/271 (30%), Gaps = 3/271 (1%)
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+L++ + L+ K Q V + S
Sbjct: 48 PVLNTRKQLSNVDRYLETMGKSLDTMQATDGHLEHVENIMQRAKEIMTNAINGSLNDADR 107
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
+ + A+ + +G P V A + +
Sbjct: 108 SVLADEIAQIRKELLDAANGMVGGKYLFAGYEEDTVPFVTNPAYDPALYDPTDSTTWPYL 167
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP-KEIDSGYSMVTLNITRHANTD 353
+ T ++ + + S I+ G + +T+
Sbjct: 168 YQGDENSTSLEITTGELIQVNLTGNDLFFGTSSWDPANPNSIEPGRYDLFAELTQAEEAI 227
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
N++ AM+ ++ ++ + ++G+ +SR+ D+ + +R +++ + R DA
Sbjct: 228 RANDQTAMQTSLADLEGAAEQNRRLRSQLGNRASRVETAMDYQEGVRVDLKQILSRYEDA 287
Query: 414 DMASESTR-LSALQTQQQLAVQALSIVNNST 443
D A ES + +T Q A+ + V+ +
Sbjct: 288 D-AIESFNAIVQQETAFQAALNVTAKVSQLS 317
>gi|46906957|ref|YP_013346.1| flagellar hook-associated protein FlgL [Listeria monocytogenes
serotype 4b str. F2365]
gi|226223337|ref|YP_002757444.1| flagellar hook-associated protein 3 FlgL [Listeria monocytogenes
Clip81459]
gi|254932014|ref|ZP_05265373.1| flagellar hook-associated protein FlgL [Listeria monocytogenes
HPB2262]
gi|290894003|ref|ZP_06556978.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL
J2-071]
gi|46880223|gb|AAT03523.1| putative flagellar hook-associated protein FlgL [Listeria
monocytogenes serotype 4b str. F2365]
gi|225875799|emb|CAS04502.1| Putative flagellar hook-associated protein 3 FlgL [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|290556449|gb|EFD89988.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL
J2-071]
gi|293583566|gb|EFF95598.1| flagellar hook-associated protein FlgL [Listeria monocytogenes
HPB2262]
gi|332311131|gb|EGJ24226.1| Flagellar hook-associated protein 3 [Listeria monocytogenes str.
Scott A]
Length = 291
Score = 62.5 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/218 (13%), Positives = 66/218 (30%), Gaps = 3/218 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A S +L +++ NL Q +VSSG + ++N + L+
Sbjct: 3 ISTNQQANSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQLNRE 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLR 120
+ S ++ A+ +S M+ + + + +D ++ EI L L
Sbjct: 63 KTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTSDKDNMSQSAEEIKGLLDVLI 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + + + K+ + D +
Sbjct: 123 SVANSEDDGRYVFSGSSTSVKPFTTDKTTGEIIYNGTTENKKFRVTDTLEVEVFHDGSAM 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
TD + K + + + + + +
Sbjct: 183 TDVFNNIQKIVDAMKTGDKDALSALQETNSKNIEIITN 220
>gi|225619493|ref|YP_002720750.1| flagellar protein [Brachyspira hyodysenteriae WA1]
gi|225214312|gb|ACN83046.1| flagellar protein [Brachyspira hyodysenteriae WA1]
Length = 267
Score = 62.5 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 35/106 (33%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
+ + + + ID I+ +G+ +R + + +
Sbjct: 162 KNEFNSYISVSSVSKANRTIGMIDNAIEYVIKQRADLGAYKNRFNTYIQGLMNSYENTIA 221
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +D D+A S + + Q A+ L NN L+L +
Sbjct: 222 YGSKKMDRDVAEASIYEAISSIKSQSALAMLVHSNNLPKDALNLLK 267
Score = 62.1 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 36/100 (36%), Gaps = 3/100 (3%)
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQ 118
G S + A + + ID++ I+ +D IQ+E++ L +
Sbjct: 46 RAEKNTQDGISFIQTADGYLGETIDILQRIRELAVKSANGIYNNSDRSYIQAEVSSLIDE 105
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN 158
+ +A + FN N L ++ + A I D
Sbjct: 106 IDRVASQAQFNTLNILTGRFSNTVNASASMWIHIGPSRDQ 145
>gi|328470108|gb|EGF41019.1| flagellar hook-associated protein FlgL [Vibrio parahaemolyticus
10329]
Length = 299
Score = 62.1 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 54/143 (37%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + Q L+ + L V ++S+ R++ +D+ ++ +N A++
Sbjct: 3 ISDNQFSQMMLQSLQSNSAGLGKVLQQMSTRERLTKLSDDPMASIKLLNLERENSAIAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + + ++++ + G + IT+L+S I
Sbjct: 63 QSNIANLKTTLSSQETHLDSVSESLKSMRDIVLWGANGSLTDQDRSGMITELKSYRDSIE 122
Query: 124 RGSSFNGENWLRTDLGSSTASIA 146
+ E G+ T + A
Sbjct: 123 SSFNAQDEEGHFLFSGTKTDTAA 145
>gi|125974042|ref|YP_001037952.1| flagellin-like protein [Clostridium thermocellum ATCC 27405]
gi|125714267|gb|ABN52759.1| flagellin-like protein [Clostridium thermocellum ATCC 27405]
Length = 128
Score = 62.1 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
N + DT I + ++G++ +R+ + R+ DAD
Sbjct: 50 VNLINQPSSAIEQFDTGISIVSRFRSRLGALQNRLEHALAISNINSGNTASSEARIRDAD 109
Query: 415 MASESTRLSALQTQQQLAV 433
E T + + Q ++
Sbjct: 110 CVKEITGIMRSRILSQASM 128
>gi|16799789|ref|NP_470057.1| flagellar hook-associated protein FlgL [Listeria innocua Clip11262]
gi|16413166|emb|CAC95946.1| lin0714 [Listeria innocua Clip11262]
gi|313620049|gb|EFR91564.1| flagellar hook-associated protein 3 [Listeria innocua FSL S4-378]
gi|313624690|gb|EFR94647.1| flagellar hook-associated protein 3 [Listeria innocua FSL J1-023]
Length = 291
Score = 62.1 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/218 (13%), Positives = 66/218 (30%), Gaps = 3/218 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A S +L +++ NL Q +VSSG + ++N + L+
Sbjct: 3 ISTNQQANSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQLNRE 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLR 120
+ S ++ A+ +S M+ + + + +D ++ EI L L
Sbjct: 63 KTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTSDKDNMSQSAEEIKGLLDVLI 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + + + K+ + D +
Sbjct: 123 SVANSEDDGRYVFSGSSTSVKPFTTDKTTGEIIYNGTTENKKFRVTDTLEVEVFHDGSAM 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
TD + K + + + + + +
Sbjct: 183 TDVFNNIQKIVDAMKSGDKDALSALQETNSKNIEIITN 220
>gi|157147095|ref|YP_001454414.1| hypothetical protein CKO_02872 [Citrobacter koseri ATCC BAA-895]
gi|157084300|gb|ABV13978.1| hypothetical protein CKO_02872 [Citrobacter koseri ATCC BAA-895]
Length = 294
Score = 62.1 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/167 (12%), Positives = 58/167 (34%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+L + + +++S+ R++ +D+ S + + A+ I S
Sbjct: 2 LAQLGVNGTRISKLMEQMSTQKRINVPSDDPVSASRLVQLNREQSAIKQYQSNISSLSGA 61
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
+ I ++ ++ + M + +K+ K + +L S L + + EN
Sbjct: 62 LSIQESNITALSNQMLAVGDKLKLANNSTLSQKDMAGYGMELSSMLDSLVATLNAKNENG 121
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
G+ T S + + + G + + ++ ++
Sbjct: 122 SYLFSGTQTDSQTVTWDEAKGQYVYGGNDSSRETIVANGVSITENTQ 168
>gi|161176404|gb|ABX59592.1| Fla [Borrelia theileri]
Length = 75
Score = 62.1 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Query: 52 IMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSI 108
+ + LS S + + + +++ ++ +K D SI
Sbjct: 1 KINAQIRGLSQASRNTSKAINFIQTTEGNLNEVEKILVRMKELAVQSGNGTYSDADRGSI 60
Query: 109 QSEITQLQSQLRDIA 123
Q EI QL ++ +A
Sbjct: 61 QIEIEQLTDEINRVA 75
>gi|28900129|ref|NP_799784.1| flagellar hook-associated protein FlgL [Vibrio parahaemolyticus
RIMD 2210633]
gi|153837074|ref|ZP_01989741.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus
AQ3810]
gi|260365779|ref|ZP_05778275.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus K5030]
gi|260880701|ref|ZP_05893056.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus
AN-5034]
gi|260897693|ref|ZP_05906189.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus
Peru-466]
gi|260899396|ref|ZP_05907791.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus
AQ4037]
gi|28808412|dbj|BAC61617.1| putative flagellar hook-associated protein [Vibrio parahaemolyticus
RIMD 2210633]
gi|149749662|gb|EDM60407.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus
AQ3810]
gi|308086236|gb|EFO35931.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus
Peru-466]
gi|308091768|gb|EFO41463.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus
AN-5034]
gi|308109256|gb|EFO46796.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus
AQ4037]
gi|308115030|gb|EFO52570.1| flagellar hook-associated protein 3 [Vibrio parahaemolyticus K5030]
Length = 299
Score = 62.1 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 54/143 (37%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N + Q L+ + L V ++S+ R++ +D+ ++ +N A++
Sbjct: 3 ISDNQFSQMMLQSLQSNSAGLGKVLQQMSTRERLTKLSDDPMASIKLLNLERENSAIAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + + ++++ + G + IT+L+S I
Sbjct: 63 QSNIANLKTTLSSQETHLDSVNESLKSMRDIVLWGANGSLTDQDRSGMITELKSYRDSIE 122
Query: 124 RGSSFNGENWLRTDLGSSTASIA 146
+ E G+ T + A
Sbjct: 123 SSFNAQDEEGHFLFSGTKTDTAA 145
>gi|126452666|ref|YP_001064572.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei
1106a]
gi|167843918|ref|ZP_02469426.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei
B7210]
gi|242316039|ref|ZP_04815055.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei
1106b]
gi|126226308|gb|ABN89848.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei
1106a]
gi|242139278|gb|EES25680.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei
1106b]
Length = 410
Score = 62.1 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/451 (11%), Positives = 113/451 (25%), Gaps = 50/451 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + D + + +VSSG+ ++ ADN + A + + + L+
Sbjct: 3 ISSTQLYSLNVDMMNDQQAQIAQLYQQVSSGISLTTPADNPLAAAQAVQLSATSATLAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMS---TIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + + + ++ DV++ G +D ++ ++I + L
Sbjct: 63 TQNQTIVQTALQTEDTTLTSVNDVLNAAYQALMHAGDGGLSDSDRAALAAQIQGSRDHLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G ++ K G D G + D + +
Sbjct: 123 TLANTADGAGNYLFAGFQPTTQPFSNKPGGGVTYAGDYGARAVQIADTRTVSQGDNGANV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G L VS+ + S +T +F +
Sbjct: 183 FMSVPFLGSLPVPAAGASNTGTGTIGAVSITNPSDPTNTHQFTI---------------- 226
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + + +S I +G + V T
Sbjct: 227 -----TFGGTAAAPTYTVTDNSVTPPPTTAAQAYSSGQGINLGGQTVAVSGKPAVGDTFT 281
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
V T V +
Sbjct: 282 VTPAPQAGTDVFATLDTVIAALKSPVGNSQTAS---------------------TALTNT 320
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
M + + + +G + + + L D ++ + +
Sbjct: 321 MATASTKLMNTMTNVLTVQASVGGRLQEVKAMQAVTTTNTLQTTNSLSNLTDTNLPAAIS 380
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ LQ A +A + LSLF+
Sbjct: 381 QFLQLQNSLSAAQKAFVQ-----MQNLSLFQ 406
>gi|83720036|ref|YP_440809.1| flagellar hook-associated protein FlgL [Burkholderia thailandensis
E264]
gi|167617594|ref|ZP_02386225.1| flagellar hook-associated protein FlgL [Burkholderia thailandensis
Bt4]
gi|257140540|ref|ZP_05588802.1| flagellar hook-associated protein FlgL [Burkholderia thailandensis
E264]
gi|83653861|gb|ABC37924.1| flagellar hook-associated protein 3 [Burkholderia thailandensis
E264]
Length = 410
Score = 62.1 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/451 (12%), Positives = 116/451 (25%), Gaps = 50/451 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I ++ + D + + +VSSG+ ++ ADN + A + + + LS
Sbjct: 3 ISSSQLYSLNVDMMNDQQAQIAQLYQQVSSGISLTTPADNPLAAAQAVQLSATSATLSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMS---TIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + + + ++ DV++ G +D ++ ++I + L
Sbjct: 63 TQNQTIVQTALQTEDTTLTSVNDVLNAAYQSIMHAGDGGLSDSDRAALAAQIQGSRDHLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G ++ K G D G + D + S
Sbjct: 123 TLANTADGAGNYLFAGFQPTTQPFSNKPGGGVTYAGDYGARTVQIADTRTVSQGDNGASV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G L VS+ + S +T +F +
Sbjct: 183 FMSVPFLGSLPVPAAGASNTGTGTIGAVSITNPSDPTNTHQFTI---------------- 226
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ T + + +S I +G + V T T
Sbjct: 227 -----TFGGTAAAPTYTVTDNTVTPPTTTAAQPYSSGQGINLGGQTVAVSGTPAVGDTFT 281
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
A V T V T + T
Sbjct: 282 VTPAPQAGADVFATLDTVIAALKTPVGNSPSASTALTNTLATTS---------------- 325
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + + +G + + + L ++ + +
Sbjct: 326 -----TKLMNTMTNVLTVQASVGGRLQEVKAMQSVTSTNSLQTTNSLSNLTATNLPAAIS 380
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ LQ A +A + LSLF+
Sbjct: 381 QFLQLQNSLSAAQKAFVQ-----MQNLSLFQ 406
>gi|260779340|ref|ZP_05888232.1| flagellar hook-associated protein FlgL [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605504|gb|EEX31799.1| flagellar hook-associated protein FlgL [Vibrio coralliilyticus ATCC
BAA-450]
Length = 298
Score = 62.1 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 49/143 (34%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + Q L+ N L V ++S+G R++ +D+ ++ + A++
Sbjct: 3 ISDTQFSQMMLQSLQINNAGLGQVMQQMSTGERLTKLSDDPMASVQLLNLEREGSAITQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + + + + G I++L+S +
Sbjct: 63 KSNISNVKTALSNQEVQLDSVNESLKKMNELVLWGANGTLTDSDRTGIISELESLRSSVV 122
Query: 124 RGSSFNGENWLRTDLGSSTASIA 146
+ E G+ T + A
Sbjct: 123 SSFNAQDEEGRYLFSGTKTDTAA 145
>gi|34223442|gb|AAQ62964.1| flagellin [Borrelia lonestari]
Length = 145
Score = 61.7 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 32/92 (34%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
++ + ++ I+ I+ T +G+ +R+ + + ++
Sbjct: 54 QGGISSPIDVTTAIDANASLTKIEDAIRMVTDQRANLGAFQNRLESVKASTDYAIENLKA 113
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALS 437
++ DA M E + Q A+ ++
Sbjct: 114 SYAQIKDAIMTDEIVASTTNSILTQSAMAMIA 145
>gi|126176149|ref|YP_001052298.1| flagellar hook-associated protein 3 [Shewanella baltica OS155]
gi|304412501|ref|ZP_07394107.1| flagellar hook-associated protein 3 [Shewanella baltica OS183]
gi|307307160|ref|ZP_07586898.1| flagellar hook-associated protein 3 [Shewanella baltica BA175]
gi|125999354|gb|ABN63429.1| flagellar hook-associated protein 3 [Shewanella baltica OS155]
gi|304349143|gb|EFM13555.1| flagellar hook-associated protein 3 [Shewanella baltica OS183]
gi|306910399|gb|EFN40830.1| flagellar hook-associated protein 3 [Shewanella baltica BA175]
Length = 305
Score = 61.7 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 58/176 (32%), Gaps = 5/176 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M ++ TN+ L++ Y++ + +S G+ + +D+ + D +
Sbjct: 5 MQNLYTNN-----LNSLQNTTYDVARLNQMLSKGVSILSPSDDPIGVVRVMDNQRDLALV 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + A+ +S ++ +K A + S ++++ L+
Sbjct: 60 QQYVKNIDSLSTSMSRAETYLSSMVETQQRMKEISIATNSSNLSKEDRASYASEMEELLK 119
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+ + E+ G++ A + G T+ T
Sbjct: 120 GLVDNINATDESGNYLFSGNAIEKAAVVKDTTGRYVYQGDASERTVQTSNSSWTTA 175
>gi|330975983|gb|EGH76049.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 530
Score = 61.7 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/344 (11%), Positives = 94/344 (27%), Gaps = 3/344 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + + NL + VSSG++++ A D+ + + N L+
Sbjct: 3 ISTTQFFESTNTNYQRNYSNLNKTSEEVSSGIKLNTAGDDPVGAARVLQLAQQNSMLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
IG ++ V + ++ ID M + +I + +D + S + Q QSQ+
Sbjct: 63 ETNIGTINTNVVTTETTLTSIIDTMQAAREQIVSAGSGAFTDSDRLAKASALKQYQSQIL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ NG+ S+ + + D V + D + +
Sbjct: 123 GLMNSQDPNGQYIFSGSKASTPPYAQNADGSYSYKGDQTSVNLAVGDGLVMASNTTGFEA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + ++ T + + +L
Sbjct: 183 FEQSVNTTPTSATLLSPATDDGKIGLSGGLVTSTPTYNASYQGGEPYTLTFLSGTQFKIT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A G + + + + + + + S
Sbjct: 243 DASGTDVSSDTSSGGKFSHGSFDAQTFTFRGVEMTLNVNLPAADRVSDATPDAALTNRSY 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTL 344
+ + T + + + + + + +
Sbjct: 303 QLASTPDSVSTARSAGNTSTATVSSSAVGNTAADRAAFNNTFPT 346
Score = 41.3 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
N A+ + + + I+ A+ A G+ Q L++ G V+AD+
Sbjct: 438 NMTAALNSALGNMSSAIEQASTARSSGGARQLAATAQGTTNDLLKGNNTTEQGTYVNADI 497
Query: 416 ASESTRLSALQTQQQLAVQ---ALSIVNNSTA 444
+TRL+ +T + Q LS +N +
Sbjct: 498 VEATTRLTLQKTMLDASQQVFTMLSKLNLFSQ 529
>gi|143992|gb|AAA65584.1| flagellin [Borrelia burgdorferi]
Length = 64
Score = 61.7 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N SA++AS+ NL Q+++SSG R++ A+D+AA ++ + + LS
Sbjct: 3 INHNTSAINASRNNGINAANLSKTQEKLSSGYRINRASDDAAGMGVSGKINAQIRGLSQA 62
Query: 64 SD 65
S
Sbjct: 63 SR 64
>gi|323171071|gb|EFZ56720.1| flagellar hook-associated protein 3 [Escherichia coli LT-68]
Length = 298
Score = 61.7 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/176 (10%), Positives = 59/176 (33%), Gaps = 3/176 (1%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
Q +++ +L V +++++G ++ +D+ + + A+ I S+ +
Sbjct: 3 QSFNNLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQYQSNIDSASAGL 62
Query: 75 DIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
++ + + + +++ + G S+ +I L + +G
Sbjct: 63 SQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMVAALNYQDEDGH 122
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
+ +A G + D + V +D++ ++ +
Sbjct: 123 YVFGGTINDQPPIVAVDNDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTNVAASDFF 178
Score = 40.1 bits (91), Expect = 0.83, Method: Composition-based stats.
Identities = 18/167 (10%), Positives = 46/167 (27%)
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ T + + + + VDT
Sbjct: 115 NYQDEDGHYVFGGTINDQPPIVAVDNDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTNVAA 174
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
D +++ S+ + + + ++ V +DT A+ +G
Sbjct: 175 SDFFGSNLDVLNTLNSLSQELQDPNVDPADPQVQSDIQNAVDVVDTASDDLNASIASLGE 234
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ + + D + + ++ +G L D D S + L+ +
Sbjct: 235 TQNTMSMLSDAQTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEA 281
>gi|320186969|gb|EFW61682.1| Flagellar hook-associated protein FlgL [Shigella flexneri CDC
796-83]
Length = 317
Score = 61.7 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 54/141 (38%), Gaps = 6/141 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A ++ S + A
Sbjct: 7 MMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLAR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
KV + ++ +S+ + + KI D S+ ++I L+ QL ++A
Sbjct: 67 TFAIQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASI 145
+ NG +
Sbjct: 127 TTDGNGRYIFAGYKTETAPFS 147
Score = 41.7 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 28/319 (8%), Positives = 74/319 (23%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + + K + T + + + + ++
Sbjct: 61 QYTLARTFAIQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A ++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLAVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|283957136|ref|ZP_06374600.1| flagellin family protein [Campylobacter jejuni subsp. jejuni 1336]
gi|283791312|gb|EFC30117.1| flagellin family protein [Campylobacter jejuni subsp. jejuni 1336]
Length = 749
Score = 61.7 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/402 (7%), Positives = 100/402 (24%), Gaps = 3/402 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + ++ L + +++SGL++ ++ ++A+ + ++ + L V
Sbjct: 3 ITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDASIYIDNTRLEYEIKTLEQV 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLR 120
A + + + ++ K K+T T ++I E+ +++ +
Sbjct: 63 KQATNSAKEMTQNSMKALQDMVKLLEDFKVKVTQAASDGNSQTSREAIAKELERIKESIV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A S + + + + + G + T Y + + +
Sbjct: 123 QLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINVVTGAGTESPYNIPGWDLFFKAD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D ++ + + ++ I K
Sbjct: 183 GDYKKQITTNISFTDNRYTDKDKQEYLNGDSAWKQLIGQNYVKDGKLDPDIDFEDKDRKL 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + GN+ + +
Sbjct: 243 NFPPSTLYVQGTKPDGTSFKSAVLVKPDDKIEDVLEQIGALYGNTANNKVVEVSINNSGQ 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
T+ + V + E + + ++ +A +
Sbjct: 303 IQITDLKQGNNKLDFHAVAYTPQMDKTESFKAMEKFVKDNDLNMDNVTNAVMQEAMKNGD 362
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ S + ++ + ++ + +
Sbjct: 363 ITNPTSPVTIKLTGKDGKEQEFTFSLAQTDFIKSNMTDSAGN 404
Score = 49.7 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 31/361 (8%), Positives = 87/361 (24%), Gaps = 11/361 (3%)
Query: 96 TAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR 155
T ++ + + G++ G ++ A+ + +
Sbjct: 391 TDFIKSNMTDSAGNKANGADYDNVYFEKDGNTVYGNVSQVIKGSNAYATDSTKLSEVMAG 450
Query: 156 DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASG 215
+ + + + + + N + + +
Sbjct: 451 NSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSYPDPNNPGQTISFPITHTDPATGNSGVV 510
Query: 216 TISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAA 275
T S + AA+ Q+ A V + + + S+
Sbjct: 511 TGSNDITYGQINDIIGMFAADKIPTQSITAANGKVDANGYNSLQQLMKDSQATVDVSMDY 570
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
S + + + + ++ +
Sbjct: 571 KGRISVTDKLSSGTNIGISLSDSQSGHFPQPPYTTTAQVENGPNFSFSANNALVIDEPNV 630
Query: 336 DSGYSMVTLNITRHANTDAYNEK------LAMEEMVSFIDTQIKCATAAAGKIGSISSRI 389
D + T+ + + M+ + +D + +G+ + I
Sbjct: 631 DLIKDLDTMIDAVLSGNMRADGNSADPRNTGMQGALERLDHLADHISKLNTTMGAYHNTI 690
Query: 390 HLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
+ + V+ ++D D L +Q Q +++A ++T LSL
Sbjct: 691 DGVNTRVNFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKA-----STTISQLSL 745
Query: 450 F 450
Sbjct: 746 L 746
>gi|82544452|ref|YP_408399.1| flagellar hook-associated protein FlgL [Shigella boydii Sb227]
gi|81245863|gb|ABB66571.1| hook-filament junction protein [Shigella boydii Sb227]
gi|332094135|gb|EGI99187.1| flagellar hook-associated protein 3 [Shigella boydii 3594-74]
Length = 317
Score = 61.7 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 53/141 (37%), Gaps = 6/141 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A ++ S + A
Sbjct: 7 MMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLAR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
KV + ++ +S+ + + KI D S+ +I L+ QL ++A
Sbjct: 67 TFAIQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLAMDIQGLRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASI 145
+ NG +
Sbjct: 127 TTDGNGRYIFAGYKTETAPFS 147
Score = 41.7 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 28/319 (8%), Positives = 74/319 (23%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + + K + T + + + + ++
Sbjct: 61 QYTLARTFAIQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLAMDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A ++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLAVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|325274791|ref|ZP_08140820.1| flagellar hook-associated protein FlgL [Pseudomonas sp. TJI-51]
gi|324100072|gb|EGB97889.1| flagellar hook-associated protein FlgL [Pseudomonas sp. TJI-51]
Length = 470
Score = 61.7 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/413 (12%), Positives = 113/413 (27%), Gaps = 3/413 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T +++ ++ D+V+SG+R+ AAD+ + +++ L
Sbjct: 3 ISTAQFYEASASSYSKNFSSMNKTNDQVTSGIRIQTAADDPVGAARLLLLQQQQSLLDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S I S+ + ++ +S D M +D +I +E+ ++++ +
Sbjct: 63 SGNINTVSNALLQEESVLSTINDAMQRASELAIRAGGAGVTDSDRVAISTELKEIEANIF 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ NG+ ++ + S D ++ + D S
Sbjct: 123 GLLNSRDANGDYMFGGSKSTTPPYVRNSDGTYSYHGDQTQLSLQVSDTLNLATNDTGFSI 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D + + + + + +S T + + A T
Sbjct: 183 FDSASNKSRTQSSLLVPATDDNVVGVSSGLLTSSTTYNNSFTAGQPYKLTFTSATQYTIT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A G NT + + G A + S+ +
Sbjct: 243 DASGRDITSETATNGTFDSNTEGANKIALRGVEFEITVTLEEGADADAAVAGREFSLQAR 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
P N+T ++ + S T ++ + T
Sbjct: 303 PDSFNATRNGSNSSSAQITGSSVTDETAYRSTFPSNGAVIKFTGPGAYELYAQPLTADSK 362
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+F + A GS + V + + +L A
Sbjct: 363 AIASGTFTAPSLTVAGVTYEMSGSPEAGDQFAITANTHQNQNVLETISQLRAA 415
>gi|323158096|gb|EFZ44195.1| flagellar hook-associated protein 3 [Escherichia coli EPECa14]
Length = 298
Score = 61.7 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/176 (10%), Positives = 59/176 (33%), Gaps = 3/176 (1%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
Q +++ +L V +++++G ++ +D+ + + A+ I S+ +
Sbjct: 3 QSFNNLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQYQSNIDSASAGL 62
Query: 75 DIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
++ + + + +++ + G S+ +I L + +G
Sbjct: 63 SQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMVAALNYQDEDGH 122
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
+ +A G + D + V +D++ ++ +
Sbjct: 123 YVFGGTINDQPPIVAVDDDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTNVAASDFF 178
Score = 37.8 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 17/130 (13%), Positives = 41/130 (31%)
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + + VDT D +++ S+ +
Sbjct: 148 SYSYQGNSDHRQTTVSNGVEVDTNVAASDFFGSNLDVLNTLNSLSQELQNPDVDPADPQV 207
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ V +DT A+ +G + + + D + + ++ +G L D D
Sbjct: 208 QSDIQNAVDVVDTASDDLNASIASLGETQNTMSMLSDAQTDISTSNDELIGSLQDLDYGP 267
Query: 418 ESTRLSALQT 427
S + L+
Sbjct: 268 ASITFTGLEV 277
>gi|134297190|ref|YP_001120925.1| flagellar hook-associated protein FlgL [Burkholderia vietnamiensis
G4]
gi|134140347|gb|ABO56090.1| flagellar hook-associated protein 3 [Burkholderia vietnamiensis G4]
Length = 413
Score = 61.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/358 (13%), Positives = 98/358 (27%), Gaps = 3/358 (0%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
++ D L + +++SG+ + ADN + A + + LS + + +
Sbjct: 15 QMNDQQAQLSQLYQQIASGVSLQTPADNPVGAAQAVQLSMTSATLSQYTANQSTALASLQ 74
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ---SQLRDIARGSSFNGEN 132
+ V++ ++ + + TQLQ QL +A + G
Sbjct: 75 AEDQTLQSVSTVLTGVQTLTVRAGDGSLADSDRAALATQLQGYRDQLMTLANTNDGAGTY 134
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
SS + D+G Q+ D + + + G +
Sbjct: 135 LFAGVNNSSAPFTSSPNGTVSYVGDSGTRQVQIGDSSSVAQGDTGAAVFMSVQSLGSVPV 194
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ V+V S + F + T AK T P
Sbjct: 195 PAADAANTGTGRITAVTVTSPSAATNGHHFAITFGGTPAAPTYTVTDSSAKPPTTTPAQA 254
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A A+ G + S S + +A ++ A +++ S + V
Sbjct: 255 YTAGASIALGGGMTVSVSGTPSAGDSFSVTPGPQATGGADIFSTLDSMIAALKTPVTGNP 314
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ T + + + + A + S +
Sbjct: 315 VAAAALSNAMMTGSIKVGNTMRNVTTIQASVGGREQEVKAMQAVTQTASLQTTSNLTD 372
>gi|313497769|gb|ADR59135.1| FlgL [Pseudomonas putida BIRD-1]
Length = 520
Score = 61.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/332 (12%), Positives = 95/332 (28%), Gaps = 3/332 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T +++ ++ D+V+SG+R+ AAD+ + +++ L
Sbjct: 3 ISTAQFYEASASSYSKNFSSMNKTNDQVTSGIRIQTAADDPVGAARLLLLQQQQSLLDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S I S+ + ++ +S + M +D +I +E+ ++++ +
Sbjct: 63 SGNINTVSNSLLQEESVLSTINEAMQRASELAIRAGGAGVTDSDRVAIGTELKEIEANIF 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ NG+ ++ + S D ++ + D S
Sbjct: 123 GLLNSRDANGDYMFGGSKSTTPPYVRNSDGTYSYHGDQTQLSLQVSDTLSLATNDTGFSI 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D + + + + +S T + + A T
Sbjct: 183 FDSASNKSRTQSTLLVPATDDSVVGVSSGLLASSTTYNNSFTAGQPYKLTFTSATQYTIT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A G T + + G + S+ +
Sbjct: 243 DANGNDITSETPTNGTFDSKTEGANKIALRGVEFEITVTLEEGADADAAVGGREFSLEAR 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
P N+T + V + S T ++
Sbjct: 303 PDSFNTTRNGSNTSSAQVTSSSVTDEAAYRST 334
Score = 39.3 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 39/314 (12%), Positives = 87/314 (27%), Gaps = 5/314 (1%)
Query: 137 DLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
G +S + + + T D + S T +
Sbjct: 209 SSGLLASSTTYNNSFTAGQPYKLTFTSATQYTITDANGNDITSETPTNGTFDSKTEGANK 268
Query: 197 KVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAP 256
V +I V++ + + + + + A +
Sbjct: 269 IALRGVEFEITVTLEEGADADAAVGGREFSLEARPDSFNTTRNGSNTSSAQVTSSSVTDE 328
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
AA +T + G+ A + K + T+ +V +
Sbjct: 329 AAYRSTFPSDGAVIKFTGPGAYEFYAQPLTADSKPVAKGTFTAPSLTVAGVTYQVSGSPE 388
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
D + T ++ ++ L A K A ++ + + +
Sbjct: 389 AGDQFAVTANTHQNQNVLETLSQLRAALETPVTGAGAANALKDAAASAIANLASAREQVD 448
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
G IG+ + + +Q + A + + + DM+ + L+ Q + + A
Sbjct: 449 ITRGSIGARGNSLEIQRQENTSLGLANKTTQNAIGNTDMSQAAITLTLQQAMLEASQLAF 508
Query: 437 SIVNNSTARILSLF 450
S ++ LSLF
Sbjct: 509 SRISQ-----LSLF 517
>gi|54307276|ref|YP_128296.1| flagellar hook-associated protein FlgL [Photobacterium profundum
SS9]
gi|46911696|emb|CAG18494.1| Hypothetical FlgL flagellar hook-associated protein [Photobacterium
profundum SS9]
Length = 304
Score = 61.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/190 (9%), Positives = 63/190 (33%), Gaps = 4/190 (2%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
++ + +++SG ++ +D+ ++ + +S I ++
Sbjct: 13 LTSMQSSTTGVNKSFMQLNSGEKMLKPSDDPLGSVQLMMLDREQANISQFQKNITNLEAQ 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTD----SKSIQSEITQLQSQLRDIARGSSFN 129
+ ++ + + + + ++ + + ++I +E+ L QL D A + N
Sbjct: 73 LGKTESHLDASNNAVLRVQELVISVSNASNSTVEGREAIATELESLLDQLADTANSKNPN 132
Query: 130 GENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGL 189
G+ + G ++ + NG ++ + + +
Sbjct: 133 GDYIFAGTKTDTQPITKDPATGKYVYNGNGDQRMVKVAESMSIPANQTAEDIFFNGGSDI 192
Query: 190 LDRNHKIKVE 199
+ +K +
Sbjct: 193 FNALNKTITD 202
Score = 37.0 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 53/183 (28%), Gaps = 5/183 (2%)
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ S + YI G T + N V + T +
Sbjct: 125 TANSKNPNGDYIFAGTKTDTQPITKDPATGKYVYNGNGDQRMVKVAESMSIPANQTAEDI 184
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
T+ R+ + + ++ ID +K ++G +
Sbjct: 185 FFNGGSDIFNALNKTITDLRNPAIEGASLTASVTAAQRDIDGTLKSINQVWTEVGGQRNA 244
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + + + + K +G + D D + L++ Q S V N LS
Sbjct: 245 LTMVQGSHEDNKLVNSKLIGDVKDLDYSEAILELNSQMAALQATQMTYSKVQN-----LS 299
Query: 449 LFR 451
LF+
Sbjct: 300 LFK 302
>gi|156934433|ref|YP_001438349.1| flagellar hook-associated protein FlgL [Cronobacter sakazakii ATCC
BAA-894]
gi|156532687|gb|ABU77513.1| hypothetical protein ESA_02264 [Cronobacter sakazakii ATCC BAA-894]
Length = 314
Score = 61.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 60/159 (37%), Gaps = 6/159 (3%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV+ +D+ + A ++ + A
Sbjct: 1 MMYQQNMRGITDSQSTWLKYGEQMSTGKRVNRPSDDPIAAAQAVVLSQAQAQNEQYTQAR 60
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
+ KV + + +S+ V+++ + KI TD S+ +++ ++ QL ++A
Sbjct: 61 TFATQKVSLESSVLSQVTSVITSAQEKIVYANNGTLSDTDRASVATDLQGMRDQLLNLAN 120
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQI 163
+ NG + ++ Q
Sbjct: 121 STDGNGRYIFAGYKTDAAPFSGTPGNITYNGGTENITQQ 159
Score = 37.8 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 27/84 (32%), Gaps = 5/84 (5%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+ + ++G+ + + + LVD D S +
Sbjct: 233 LSNALDNVGTVLAEVGTQQKELENLDQLGAERTLGQTAQMSNLVDVDWNSAISSY----V 288
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
QQ A+QA + +SLF+
Sbjct: 289 MQQAALQASYKAFSDMQG-MSLFQ 311
>gi|254182132|ref|ZP_04888729.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei
1655]
gi|184212670|gb|EDU09713.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei
1655]
Length = 410
Score = 61.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/451 (11%), Positives = 113/451 (25%), Gaps = 50/451 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + D + + +VSSG+ ++ ADN + A + + + L+
Sbjct: 3 ISSTQLYSLNVDMMNDQQAQIAQLYQQVSSGISLTTPADNPLAAAQAVQLSATSATLAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMS---TIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + + + ++ DV++ G +D ++ ++I + L
Sbjct: 63 TQNQTIVQTALQTEDTTLTSVNDVLNAAYQALMHAGDGGLSDSDRAALAAQIQGSRDHLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G ++ K G D G + D + +
Sbjct: 123 TLANTADGAGNYLFAGFQPTTQPFSNKPGGGVTYAGDYGARAVQIADTRTVSQGDNGANV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G L VS+ + S +T +F +
Sbjct: 183 FMSVPFLGSLPVPAAGASNTGTGTIGAVSITNPSDPTNTHQFTI---------------- 226
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + + +S I +G + V T
Sbjct: 227 -----TFGGTAAVPTYTVTDNSVTPPTTTAAQAYSSGQGINLGGQTVAVSGKPAVGDTFT 281
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
V T V +
Sbjct: 282 VTPAPQAGTDVFATLDTVIAALKSPVGNSQTAS---------------------TALTNT 320
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
M + + + +G + + + L D ++ + +
Sbjct: 321 MATASTKLMNTMTNVLTVQASVGGRLQEVKAMQAVTTTNTLQTTNSLSNLTDTNLPAAIS 380
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ LQ A +A + LSLF+
Sbjct: 381 QFLQLQNSLSAAQKAFVQ-----MQNLSLFQ 406
>gi|37909455|gb|AAP51733.1| lateral flagellin [Aeromonas jandaei]
Length = 191
Score = 61.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 54 KSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQS 110
+S + S + A+ M + +++ +K+ T D K++ +
Sbjct: 1 QSQSSGQKVGMRNSQDAISMMQTAEGAMDEMSNIVQRMKDLATQSANGTSTAEDRKAMDA 60
Query: 111 EITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
E T+L+S+L +I ++F G++ L++ G
Sbjct: 61 EFTELRSELDNITNNTTFGGQSLLKSGTGFQGDVT 95
Score = 43.2 bits (99), Expect = 0.080, Method: Composition-based stats.
Identities = 7/55 (12%), Positives = 22/55 (40%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
++ ++ +DT + + G+ +R+ + + M++ + GR
Sbjct: 137 IGDQGKATASMAELDTFSQKIGESRSAFGANINRLEHTVNNLSNMKENTDMANGR 191
>gi|323181554|gb|EFZ66974.1| flagellar hook-associated protein 3 [Escherichia coli 1357]
Length = 298
Score = 61.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/176 (10%), Positives = 59/176 (33%), Gaps = 3/176 (1%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
Q +++ +L V +++++G ++ +D+ + + A+ I S+ +
Sbjct: 3 QSFNNLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQYQSNIDSASAGL 62
Query: 75 DIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
++ + + + +++ + G S+ +I L + +G
Sbjct: 63 SQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMVAALNYQDEDGH 122
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
+ +A G + D + V +D++ ++ +
Sbjct: 123 YVFGGTINDQPPIVAVDNDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTNVAASDFF 178
Score = 40.1 bits (91), Expect = 0.85, Method: Composition-based stats.
Identities = 19/167 (11%), Positives = 47/167 (28%)
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ T + + + + VDT
Sbjct: 115 NYQDEDGHYVFGGTINDQPPIVAVDNDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTNVAA 174
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
D +++ S+ +A+ + ++ V +DT A+ +G
Sbjct: 175 SDFFGSNLDVLNTLNSLSQELQDPNADPADPQVQSDIQNAVDVVDTASDDLNASIASLGE 234
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ + + D + + ++ +G L D D S + L+ +
Sbjct: 235 TQNTMSMLSDAQTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEA 281
>gi|307136865|ref|ZP_07496221.1| flagellar hook-associated protein FlgL [Escherichia coli H736]
Length = 260
Score = 61.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/187 (11%), Positives = 65/187 (34%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q D++ +L V +++++G ++ +D+ + + A+
Sbjct: 3 VTTQQTYVSMTQSFNDLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTN 182
Query: 181 TDGTERY 187
++ +
Sbjct: 183 VAASDFF 189
>gi|254255093|ref|ZP_04948410.1| Flagellin [Burkholderia dolosa AUO158]
gi|124899738|gb|EAY71581.1| Flagellin [Burkholderia dolosa AUO158]
Length = 353
Score = 61.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/164 (10%), Positives = 55/164 (33%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
L + + ++ SG R+ +D+ ++ D ++ I S ++
Sbjct: 64 TLHASSGKAAQLMQKIGSGQRIQRPSDDPVGTVRLMQLERDASRVAQYQKNIDTLSVRLM 123
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+A + + + + ++ + A + + + + L+S +A+ ++ N
Sbjct: 124 QNEAHLDGMLQSVMSARDVLLAATDGSASAGDLNAMAGPLRSLTDALAQAANAKDGNGHY 183
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
G+ T + + + T Y+ + +
Sbjct: 184 LFAGTLTDTPPIEFDATAPAGSRYRFAGNTGQQYVAVGDGVTQA 227
>gi|114187419|gb|ABI54095.1| flagellin [Borrelia anserina]
Length = 254
Score = 61.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 3/96 (3%)
Query: 55 SDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSE 111
+ LS S + + + +++ V+ +K D SIQ E
Sbjct: 1 AQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIE 60
Query: 112 ITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
I QL ++ IA + +N + L + A+
Sbjct: 61 IEQLTDEINRIADQAQYNQMHMLSNKSAAQNVRTAE 96
Score = 51.7 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/147 (10%), Positives = 41/147 (27%)
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ G+ W + + N A V N ++
Sbjct: 103 AKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVANLFAGEGAQAAPAQEGAQQE 162
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + ++ I+ I+ + +G+ +R+
Sbjct: 163 GVQATPAPVAAPTPGGVNSPINVITAVDANMSLAKIEDAIRMVSDQRANLGAFQNRLESI 222
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASES 419
+D + + ++ ++ DA M E
Sbjct: 223 KDSTEYAIENLKASYAQIKDATMTDEI 249
>gi|53717922|ref|YP_106908.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei
K96243]
gi|53724573|ref|YP_104806.1| flagellar hook-associated protein FlgL [Burkholderia mallei ATCC
23344]
gi|121601423|ref|YP_994299.1| flagellar hook-associated protein FlgL [Burkholderia mallei SAVP1]
gi|124383357|ref|YP_001028052.1| flagellar hook-associated protein FlgL [Burkholderia mallei NCTC
10229]
gi|126439975|ref|YP_001057330.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei
668]
gi|126449830|ref|YP_001082859.1| flagellar hook-associated protein FlgL [Burkholderia mallei NCTC
10247]
gi|134283595|ref|ZP_01770294.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 305]
gi|162210074|ref|YP_331889.2| flagellar hook-associated protein FlgL [Burkholderia pseudomallei
1710b]
gi|167717671|ref|ZP_02400907.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei
DM98]
gi|167736712|ref|ZP_02409486.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei
14]
gi|167813811|ref|ZP_02445491.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei
91]
gi|167822328|ref|ZP_02453799.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei
9]
gi|167892420|ref|ZP_02479822.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei
7894]
gi|167900917|ref|ZP_02488122.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei
NCTC 13177]
gi|167917172|ref|ZP_02504263.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei
BCC215]
gi|217425064|ref|ZP_03456560.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 576]
gi|226199736|ref|ZP_03795287.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei
Pakistan 9]
gi|254174714|ref|ZP_04881375.1| flagellar hook-associated protein 3 [Burkholderia mallei ATCC
10399]
gi|254188064|ref|ZP_04894576.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei
Pasteur 52237]
gi|254196573|ref|ZP_04902997.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei S13]
gi|254201903|ref|ZP_04908267.1| flagellar hook-associated protein 3 [Burkholderia mallei FMH]
gi|254207238|ref|ZP_04913589.1| flagellar hook-associated protein 3 [Burkholderia mallei JHU]
gi|254295822|ref|ZP_04963279.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei
406e]
gi|254359740|ref|ZP_04976011.1| flagellar hook-associated protein 3 [Burkholderia mallei
2002721280]
gi|52208336|emb|CAH34269.1| putative flagellar hook-associated protein [Burkholderia
pseudomallei K96243]
gi|52427996|gb|AAU48589.1| flagellar hook-associated protein 3 [Burkholderia mallei ATCC
23344]
gi|121230233|gb|ABM52751.1| flagellar hook-associated protein 3 [Burkholderia mallei SAVP1]
gi|124291377|gb|ABN00646.1| flagellar hook-associated protein 3 [Burkholderia mallei NCTC
10229]
gi|126219468|gb|ABN82974.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 668]
gi|126242700|gb|ABO05793.1| flagellar hook-associated protein 3 [Burkholderia mallei NCTC
10247]
gi|134245004|gb|EBA45099.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 305]
gi|147747797|gb|EDK54873.1| flagellar hook-associated protein 3 [Burkholderia mallei FMH]
gi|147752780|gb|EDK59846.1| flagellar hook-associated protein 3 [Burkholderia mallei JHU]
gi|148028954|gb|EDK86886.1| flagellar hook-associated protein 3 [Burkholderia mallei
2002721280]
gi|157805584|gb|EDO82754.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei
406e]
gi|157935744|gb|EDO91414.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei
Pasteur 52237]
gi|160695759|gb|EDP85729.1| flagellar hook-associated protein 3 [Burkholderia mallei ATCC
10399]
gi|169653316|gb|EDS86009.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei S13]
gi|217392084|gb|EEC32110.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 576]
gi|225928087|gb|EEH24123.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei
Pakistan 9]
Length = 410
Score = 61.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/451 (11%), Positives = 113/451 (25%), Gaps = 50/451 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + D + + +VSSG+ ++ ADN + A + + + L+
Sbjct: 3 ISSTQLYSLNVDMMNDQQAQIAQLYQQVSSGISLTTPADNPLAAAQAVQLSATSATLAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMS---TIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + + + ++ DV++ G +D ++ ++I + L
Sbjct: 63 TQNQTIVQTALQTEDTTLTSVNDVLNAAYQALMHAGDGGLSDSDRAALAAQIQGSRDHLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G ++ K G D G + D + +
Sbjct: 123 TLANTADGAGNYLFAGFQPTTQPFSNKPGGGVTYAGDYGARAVQIADTRTVSQGDNGANV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G L VS+ + S +T +F +
Sbjct: 183 FMSVPFLGSLPVPAAGASNTGTGTIGAVSITNPSDPTNTHQFTI---------------- 226
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + + +S I +G + V T
Sbjct: 227 -----TFGGTAAAPTYTVTDNSVTPPTTTAAQAYSSGQGINLGGQTVAVSGKPAVGDTFT 281
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
V T V +
Sbjct: 282 VTPAPQAGTDVFATLDTVIAALKSPVGNSQTAS---------------------TALTNT 320
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
M + + + +G + + + L D ++ + +
Sbjct: 321 MATASTKLMNTMTNVLTVQASVGGRLQEVKAMQAVTTTNTLQTTNSLSNLTDTNLPAAIS 380
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ LQ A +A + LSLF+
Sbjct: 381 QFLQLQNSLSAAQKAFVQ-----MQNLSLFQ 406
>gi|167994048|ref|ZP_02575140.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205328028|gb|EDZ14792.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|332988075|gb|AEF07058.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 317
Score = 61.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/193 (12%), Positives = 55/193 (28%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + +++S+G RV++ +D+ S A ++ S
Sbjct: 3 ISTQMMYEQNMNGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLSQAQAQNSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ A + KV + ++ +S+ + T + KI S T LQ +
Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N G T + V +
Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQQVDSARTMVIGHTGAQIFNS 182
Query: 184 TERYGLLDRNHKI 196
+ + +
Sbjct: 183 ITSNAVPEPDGSD 195
>gi|283784871|ref|YP_003364736.1| flagellar hook-associated protein 3 [Citrobacter rodentium ICC168]
gi|282948325|emb|CBG87910.1| flagellar hook-associated protein 3 [Citrobacter rodentium ICC168]
Length = 317
Score = 61.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/197 (13%), Positives = 53/197 (26%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + +++SSG RV + +D+ S A ++ S
Sbjct: 3 ISTQMMYQQNMRGITTSQAEWIRYGEQMSSGKRVVNPSDDPIAASQAVVLSQAQAQNSQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ A + KV + ++ +S+ + + KI S T LQ +
Sbjct: 63 ALARTFATQKVSLEESVLSEVTTAIQAAQEKIVNAGNGTLSDDDRASLATDLQGIRDQLM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N G T + + D D
Sbjct: 123 NLANSTDGNGRYIFAGYKTGEAPFAQADGTYSGGTESITQQVDSARTMVIGHTGDKIFDS 182
Query: 184 TERYGLLDRNHKIKVEP 200
+ + N
Sbjct: 183 ITSNAVPEPNGDDSETN 199
>gi|76579450|gb|ABA48925.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei
1710b]
Length = 396
Score = 61.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 50/438 (11%), Positives = 111/438 (25%), Gaps = 50/438 (11%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDI 76
+ D + + +VSSG+ ++ ADN + A + + + L+ + + + +
Sbjct: 2 MNDQQAQIAQLYQQVSSGISLTTPADNPLAAAQAVQLSATSATLAQYTQNQTIVQTALQT 61
Query: 77 AKAGMSKAIDVMS---TIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
++ DV++ G +D ++ ++I + L +A + G
Sbjct: 62 EDTTLTSVNDVLNAAYQALMHAGDGGLSDSDRAALAAQIQGSRDHLLTLANTADGAGNYL 121
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
++ K G D G + D + + G L
Sbjct: 122 FAGFQPTTQPFSNKPGGGVTYAGDYGARAVQIADTRTVSQGDNGANVFMSVPFLGSLPVP 181
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
VS+ + S +T +F +
Sbjct: 182 AAGASNTGTGTIGAVSITNPSDPTNTHQFTI---------------------TFGGTAAA 220
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+ + + + +S I +G + V T V
Sbjct: 221 PTYTVTDNSVTPPTTTAAQAYSSGQGINLGGQTVAVSGKPAVGDTFTVTPAPQAGTDVFA 280
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T V + M + + +
Sbjct: 281 TLDTVIAALKSPVGNSQTAS---------------------TALTNTMATASTKLMNTMT 319
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G + + + L D ++ + ++ LQ A
Sbjct: 320 NVLTVQASVGGRLQEVKAMQAVTTTNTLQTTNSLSNLTDTNLPAAISQFLQLQNSLSAAQ 379
Query: 434 QALSIVNNSTARILSLFR 451
+A + LSLF+
Sbjct: 380 KAFVQ-----MQNLSLFQ 392
>gi|237810469|ref|YP_002894920.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei
MSHR346]
gi|237503583|gb|ACQ95901.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei
MSHR346]
Length = 410
Score = 61.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/451 (11%), Positives = 114/451 (25%), Gaps = 50/451 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + D + + +VSSG+ ++ ADN + A + + + L+
Sbjct: 3 ISSTQLYSLNVDMMNDQQAQIAQLYQQVSSGISLTTPADNPLAAAQAVQLSATSATLAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMS---TIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + + + ++ DV++ G +D ++ ++I + L
Sbjct: 63 TQNQTIVQTALQTEDTTLTSVNDVLNAAYQALMHAGDGGLSDSDRAALAAQIQGSRDHLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G ++ K G D G + D + +
Sbjct: 123 TLANTADGAGNYLFAGFQPTTQPFSNKPGGGVTYAGDYGARAVQIADTRTVSQGDNGANV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G L VS+ + S +T +F +
Sbjct: 183 FMSVPFLGSLPVPAAGASNTGTGTIGAVSITNPSDPTNTHQFTI---------------- 226
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + + +S I +G + V T
Sbjct: 227 -----TFGGTAAAPTYTVTDNSVTPPTTTAAQAYSSGQGINLGGQTVAVSGKPAVGDTFT 281
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
V T V + +
Sbjct: 282 VTPAPQAGTDVFATLDTVISALKSPVGNSQTAS---------------------TALTNT 320
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
M + + + +G + + + L D ++ + +
Sbjct: 321 MATASTKLMNTMTNVLTVQASVGGRLQEVKAMQAVTTTNTLQTTNSLSNLTDTNLPAAIS 380
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ LQ A +A + LSLF+
Sbjct: 381 QFLQLQNSLSAAQKAFVQ-----MQNLSLFQ 406
>gi|167909136|ref|ZP_02496227.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei
112]
Length = 410
Score = 61.3 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/451 (11%), Positives = 113/451 (25%), Gaps = 50/451 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + D + + +VSSG+ ++ ADN + A + + + L+
Sbjct: 3 ISSTQLYSLNVDMMNDQQAQIAQLYQQVSSGISLTTPADNPLAAAQAVQLSATSATLAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMS---TIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + + + ++ DV++ G +D ++ ++I + L
Sbjct: 63 TQNQTIVQTALQTEDTTLTSVNDVLNAAYQALMHAGDGGLSDSDRAALAAQIQGSRDHLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G ++ K G D G + D + +
Sbjct: 123 TLANTADGAGNYLFAGFQPTTQPFSNKPGGGVTYAGDYGARAVQIADTRTVSQGDNGANV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G L VS+ + S +T +F +
Sbjct: 183 FMSVPFLGSLPVPAAGASNTGTGTIGAVSITNPSDPTNTHQFTI---------------- 226
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + + +S I +G + V T
Sbjct: 227 -----TFGGTAAAPTYTVTDNSVTPPTTTAAQAYSSGQGINLGGQTVAVSGKPAVGDTFT 281
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
V T V +
Sbjct: 282 VTPAPQAGTDVFATLDTVIAALESPVGNSQTAS---------------------TALTNT 320
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
M + + + +G + + + L D ++ + +
Sbjct: 321 MATASTKLMNTMTNVLTVQASVGGRLQEVKAMQAVTTTNTLQTTNSLSNLTDTNLPAAIS 380
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ LQ A +A + LSLF+
Sbjct: 381 QFLQLQNSLSAAQKAFVQ-----MQNLSLFQ 406
>gi|331640720|ref|ZP_08341867.1| bacterial flagellin N-terminus subfamily [Escherichia coli H736]
gi|331040094|gb|EGI12302.1| bacterial flagellin N-terminus subfamily [Escherichia coli H736]
Length = 268
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/187 (11%), Positives = 65/187 (34%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q D++ +L V +++++G ++ +D+ + + A+
Sbjct: 11 VTTQQTYVSMTQSFNDLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQY 70
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 71 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 130
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 131 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTN 190
Query: 181 TDGTERY 187
++ +
Sbjct: 191 VAASDFF 197
>gi|51895609|gb|AAU13836.1| flagellin A subunit [Helicobacter pylori]
Length = 416
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/166 (15%), Positives = 53/166 (31%), Gaps = 3/166 (1%)
Query: 46 YWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERG 102
++A ++S +L G + +A M + + ++ T+K K T +
Sbjct: 1 GMTVADSLRSQASSLGQAIANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTT 60
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
K+IQS+I +L L +I +++NG+ L + + S
Sbjct: 61 ESRKAIQSDIVRLIQGLDNIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTS 120
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ ++ S + N +V
Sbjct: 121 DKIGQVRIATGALITASGDISLTFKQVDGVNDVTLESVKVSSSAGT 166
>gi|1147793|gb|AAA85133.1| flagellin [Borrelia theileri]
Length = 102
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 3/95 (3%)
Query: 52 IMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSI 108
+ + LS S + + + + + ++ +K D SI
Sbjct: 1 KINAQIRGLSQASRNTSKAINFIQTTEGNLIEVEKILVRMKELAVQSGNGTYSDADRGSI 60
Query: 109 QSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTA 143
Q EI QL ++ +A + +N + L +
Sbjct: 61 QIEIEQLTDEINRVADQAQYNQMHMLSNKSSAQNV 95
>gi|66046699|ref|YP_236540.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
syringae B728a]
gi|63257406|gb|AAY38502.1| Flagellin, N-terminal [Pseudomonas syringae pv. syringae B728a]
Length = 530
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/344 (11%), Positives = 95/344 (27%), Gaps = 3/344 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + + NL + VSSG++++ A D+ + + N L+
Sbjct: 3 ISTTQFFESTNTNYQRNYSNLNKTSEEVSSGIKLNTAGDDPVGAARVLQLAQQNSMLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
IG ++ V + ++ ID M + +I + +D + S + Q QSQ+
Sbjct: 63 ETNIGTINTNVVTTETTLTSIIDTMQAAREQIVSAGSGAFTDSDRLAKASALKQYQSQIL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ NG+ S+ + + D V + D + +
Sbjct: 123 GLMNSQDPNGQYIFSGSKASTPPYAQNADGSYSYKGDQTSVNLAVGDGLVMASNTTGFEA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + ++ T + + +L
Sbjct: 183 FEQSVNTTRTSATRLSPATDDGKIGLSGGLVTSTPTYNASYQGGEPYTLTFLSGTQFKIT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A G + + + + + + A + S
Sbjct: 243 DASGTDVSSDTSSGGKFSHGSFDAQTFTFRGVEMTLNVNLPAADRVSDATADAALANRSY 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTL 344
+ + T + + + + + + +
Sbjct: 303 QLASTPDSVSTARSAGNTSTATVSSSAVGNTAADRTAFNNTFPT 346
Score = 42.0 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 45/357 (12%), Positives = 90/357 (25%), Gaps = 10/357 (2%)
Query: 98 GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157
T ++ + + ++ ++ + + S+ A G
Sbjct: 173 MASNTTGFEAFEQSVNTTRTSATRLSPATDDGKIGLSGGLVTSTPTYNASYQGGEPYTLT 232
Query: 158 NGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI 217
I + SS + + L + S
Sbjct: 233 FLSGTQFKITDASGTDVSSDTSSGGKFSHGSFDAQTFTFRGVEMTLNVNLPAADRVSDAT 292
Query: 218 STKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASA 277
+ + A + +T A +T V A + + + A
Sbjct: 293 ADAALANRSYQLASTPDSVSTARSAGNTSTATVSSSAVGNTAADRTAFNNTFPTEGAILK 352
Query: 278 TYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDS 337
T+ + S T ST G T + +
Sbjct: 353 FTSPTDYDLYAAPLTSSSKPVSSGTMTGSTANASGVNFNISGTPAAGDQFIVESGTHQTE 412
Query: 338 GYSMVTL-------NITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
T + N A+ + + + I+ A+ A G+
Sbjct: 413 NILNTLTAAIKALSTPTDGNLVASQNMTAALNTALGNMSSAIEQASTARSSGGARQLAAT 472
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQ---ALSIVNNSTA 444
Q L++D G V+AD+ +TRL+ +T + Q LS +N +
Sbjct: 473 AQGTTNDLLKDNNTVEQGTYVNADIVEATTRLTLQKTMLDASQQVFTMLSKLNLFSQ 529
>gi|327254561|gb|EGE66177.1| flagellar hook-associated protein 3 [Escherichia coli STEC_7v]
Length = 309
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 63/187 (33%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q +++ L V +++++G + +D+ + + A+
Sbjct: 3 VTTQQTYVSMTQSFNNLSGELAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVALDDDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTN 182
Query: 181 TDGTERY 187
++ +
Sbjct: 183 VAVSDFF 189
Score = 39.7 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 18/167 (10%), Positives = 47/167 (28%)
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ T + + + + VDT
Sbjct: 126 NYQDEDGHYVFGGTINDQPPIVALDDDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTNVAV 185
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
D +++ S+ + + + ++ V+ +DT A+ +G
Sbjct: 186 SDFFGSNLDVLNTLNSLSQELQDPNVDPADPQVQSDIQNAVNVVDTASDDLNASIASLGE 245
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ + + D + + ++ +G L D D S + L+ +
Sbjct: 246 TQNTMSMLSDAQTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEA 292
>gi|94995567|gb|ABF50695.1| flagellin [Borrelia lonestari]
Length = 156
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 32/92 (34%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
++ + ++ I+ I+ T +G+ +R+ + + ++
Sbjct: 65 QGGISSPINVTTAIGANASLTKIEDAIRMVTDQRANLGAFQNRLESVKASTDYAIENLKA 124
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALS 437
++ DA M E + Q A+ ++
Sbjct: 125 SYAQIKDAIMTDEIVASTTNSILTQSAMAMIA 156
>gi|187925753|ref|YP_001897395.1| flagellar hook-associated protein FlgL [Burkholderia phytofirmans
PsJN]
gi|187716947|gb|ACD18171.1| flagellar hook-associated protein 3 [Burkholderia phytofirmans
PsJN]
Length = 407
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 47/335 (14%), Positives = 96/335 (28%), Gaps = 3/335 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + D L + +SSG+ +S +DN + A + S LS
Sbjct: 3 ISSTQYFNMNVATMSDQQAQLSQLYAEISSGVSLSTPSDNPLGAAQAVQLSSTATTLSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ G + + + V+ TI + G D SI +++ L+SQL
Sbjct: 63 TTNQGTALASLQQEDTTLGSVNTVLQTIHTLVLRAGDGSLNDGDRGSIATQLQSLRSQLM 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G S+ S D G + D ++ +
Sbjct: 123 TLANSTDPQGNYLFAGYQSSAQPYTTNSAGVVTYSGDTGTPGVQVTDSHVVQTGDNGIAI 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G VS+ + + + K+ + +S +
Sbjct: 183 FGSVAPIGTSAVPAATTGNTGTGVISQVSLTNPTDPTNADKYSINFSSATTYTVSQTDPA 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ P A A S + +P+ S + + V A IT+
Sbjct: 243 TGAVTTSAPQAFTAGSAITLGGQSVSITGAPNAGDSFSVTPATQGSMDVFANLSQLITTL 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
+ + + + ++ ++
Sbjct: 303 QTPVSGGASTASFQSALTTSMTQLENTMNNVVTAQ 337
>gi|330899412|gb|EGH30831.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
japonica str. M301072PT]
Length = 530
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/344 (11%), Positives = 95/344 (27%), Gaps = 3/344 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + + NL + VSSG++++ A D+ + + N L+
Sbjct: 3 ISTTQFFESTNTNYQRNYSNLNKTSEEVSSGIKLNTAGDDPVGAARVLQLAQQNSMLTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLR 120
IG ++ V + ++ ID M + +I + +D + S + Q QSQ+
Sbjct: 63 ETNIGTINTNVVTTETTLTSIIDTMQAAREQIVSAGSGAFTDSDRLAKASALKQYQSQIL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ NG+ S+ + + D V + D + +
Sbjct: 123 GLMNSQDPNGQYIFSGSKASTPPYAQNADGSYSYKGDQTSVNLAVGDGLVMASNTTGFEA 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + + ++ T + + +L
Sbjct: 183 FEQSVNTTRTSATLLSPATDDGKIGLSGGLVTSTPTYNASYQGGGPYTLTFLSGTQFKIT 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A G + + + + + + A + S
Sbjct: 243 DASGTDVSSDTSSGGKFSHGSFDAQTFTFRGVEMTLNVNLPAADRVSDATADAALANRSY 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTL 344
+ + T + + + + + + +
Sbjct: 303 QLASTPDSVSTARSAGNTSTATVSSSAVGNTAADRAAFNNTFPT 346
Score = 40.9 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
N A+ + + + I+ A+ A G+ Q L++ G V+AD+
Sbjct: 438 NMTAALNSALGNMSSAIEQASTARSSGGARQLAATAQGTTNDLLKGNNTTEQGTYVNADI 497
Query: 416 ASESTRLSALQTQQQLAVQ---ALSIVNNSTA 444
+TRL+ +T + Q LS +N +
Sbjct: 498 VEATTRLTLQKTMLDASQQVFTMLSKLNLFSQ 529
>gi|94995569|gb|ABF50696.1| flagellin [Borrelia lonestari]
Length = 155
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 32/92 (34%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
++ + ++ I+ I+ T +G+ +R+ + + ++
Sbjct: 64 QGGISSPINVTTAIDANASLTKIEDAIRMVTDQRANLGAFQNRLESVKASTDYAIENLKA 123
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALS 437
++ DA M E + Q A+ ++
Sbjct: 124 SYAQIKDAIMTDEIVASTTNSILTQSAMAMIA 155
>gi|293414376|ref|ZP_06657025.1| flagellar hook-associated protein 3 [Escherichia coli B185]
gi|291434434|gb|EFF07407.1| flagellar hook-associated protein 3 [Escherichia coli B185]
Length = 272
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 6/144 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A ++ S + A
Sbjct: 7 MMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLAR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
+ KV + ++ +S+ + + KI D S+ ++I L+ QL ++A
Sbjct: 67 TFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASIAKS 148
+ NG + +
Sbjct: 127 TTDGNGRYIFAGYKTETAPFSEAN 150
>gi|153831272|ref|ZP_01983939.1| flagellin core protein A [Vibrio cholerae 623-39]
gi|148873245|gb|EDL71380.1| flagellin core protein A [Vibrio cholerae 623-39]
Length = 49
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+E R+ D D A E+T+L+ Q QQ L+ +SL +
Sbjct: 1 MEASKSRIKDTDFAKETTQLTKSQILQQAGTSILAQAKQLPNSAISLLQ 49
>gi|258592551|emb|CBE68860.1| putative Flagellar hook-associated protein 3 [NC10 bacterium 'Dutch
sediment']
Length = 307
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 46/119 (38%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +N + + L Q +V+S R++ A+D+ +A ++ L
Sbjct: 3 ITSNAIFHQLTADINRAAIRLFERQRQVASSRRMATASDDPVGAGLAVWLRESVSKLLQA 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
+++ + ++ + ++ +K+ G++ Q+ TQ+ +L +
Sbjct: 63 QRNGDQAEARLQASADVLAGILSDLNDVKDLAIRGIDGALTLSDRQNLATQVNQKLERL 121
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 2/101 (1%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ +E ++ ++ I + +GS RI + + A+ + ++
Sbjct: 209 DQLRAGNVAGVEASLTDLEAAIDQVRVVSADVGSRIGRIRDIQARSQNDLLALRGRLSKI 268
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
D D+A S Q Q A+ A S V +L R
Sbjct: 269 EDTDVAEASIEFQQAQNVYQAALAAASRVGQI--NLLDFLR 307
>gi|256020235|ref|ZP_05434100.1| flagellar hook-associated protein 3 [Shigella sp. D9]
gi|331666553|ref|ZP_08367427.1| flagellar hook-associated protein 3 [Escherichia coli TA271]
gi|332281397|ref|ZP_08393810.1| flagellar hook associated protein [Shigella sp. D9]
gi|331065777|gb|EGI37661.1| flagellar hook-associated protein 3 [Escherichia coli TA271]
gi|332103749|gb|EGJ07095.1| flagellar hook associated protein [Shigella sp. D9]
Length = 309
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 65/187 (34%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q +++ +L V +++++G ++ +D+ + + A+
Sbjct: 3 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVAVDNDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTN 182
Query: 181 TDGTERY 187
++ +
Sbjct: 183 VAASDFF 189
Score = 39.3 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 19/167 (11%), Positives = 47/167 (28%)
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ T + + + + VDT
Sbjct: 126 NYQDEDGHYVFGGTINDQPPIVAVDNDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTNVAA 185
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
D +++ S+ +A+ + ++ V +DT A+ +G
Sbjct: 186 SDFFGSNLDVLNTLNSLSQELQDPNADPADPQVQSDIQNAVDVVDTASDDLNASIASLGE 245
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ + + D + + ++ +G L D D S + L+ +
Sbjct: 246 TQNTMSMLSDAQTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEA 292
>gi|34328605|gb|AAQ63645.1| flagellin [Borrelia lonestari]
gi|94502730|gb|ABF29592.1| flagellin [Borrelia lonestari]
Length = 159
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 32/92 (34%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
++ + ++ I+ I+ T +G+ +R+ + + ++
Sbjct: 68 QGGISSPINVTTAIDANASLTKIEDAIRMVTDQRANLGAFQNRLESVKASTDYAIENLKA 127
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALS 437
++ DA M E + Q A+ ++
Sbjct: 128 SYAQIKDAIMTDEIVASTTNSILTQSAMAMIA 159
>gi|103488394|ref|YP_617955.1| flagellin-like protein [Sphingopyxis alaskensis RB2256]
gi|98978471|gb|ABF54622.1| flagellin-like protein [Sphingopyxis alaskensis RB2256]
Length = 276
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 48/120 (40%), Gaps = 3/120 (2%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + LE Q ++S G ++ +D+ + + +++A S + ++ V A
Sbjct: 17 QSLAEQLERTQIQISGGKKLLRMSDDPVAARRIATIGTTQASMTAWSANVNSAAALVSQA 76
Query: 78 KAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
M ++M+ + + D +I +E+T + +L +A NGE
Sbjct: 77 DGVMKAVSNLMTRARELTLAAVSDSTNPADRATIAAELTTIADELDALAATRDSNGEPLF 136
Score = 40.1 bits (91), Expect = 0.69, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 2/97 (2%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ AM + + I +IG R+ D + A+ + D D
Sbjct: 182 AGDTAAMNLSLGALAASISHVADQHARIGLAGGRLDRIGDGLAARGIALTDERSVVEDTD 241
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +L+A + A A + +N + L R
Sbjct: 242 LTVAIAQLNAQELTLNAAQAAFAKINR--QTLFDLLR 276
>gi|237755866|ref|ZP_04584462.1| flagellar hook-associated protein 3 [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691977|gb|EEP60989.1| flagellar hook-associated protein 3 [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 313
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 19/206 (9%), Positives = 59/206 (28%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
+E ++++G ++ +D+ + +K+ N + + + +D A++
Sbjct: 20 QNEIEKYSKQIATGKKLLSPSDDTVATVASLRLKTINQNIDTYLRNMDFVLNVLDQAEST 79
Query: 81 MSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGS 140
+S ++ +I + G K + ++D + R G
Sbjct: 80 LSNISKAGQELRVEIVRLLNTGVLDKEDAKVLRDYFVSMKDYIIKQANYSIGDTRIFGGV 139
Query: 141 STASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
+ + G + + ++ T ++ K+
Sbjct: 140 KSQTDPFDSNGFYQGETTETKVPVAPGVEINTTFDGSKYLGVDTNDKQMIMIKAIDKIVD 199
Query: 201 QVLKDIDVSVYDASGTISTKKFKLAT 226
+ + I + +T
Sbjct: 200 IIDRAIAGTGSLGELNTATIPVNGQN 225
Score = 43.6 bits (100), Expect = 0.075, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 5/88 (5%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+++ D + IG+ I+ + + + + + L D D A T L
Sbjct: 227 KILEAFDVGLNNVLQYTSIIGTKVKIINDLKSGFEKNKVFNDNLISNLQDVDAAQAITNL 286
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLF 450
QT Q + N + LSL
Sbjct: 287 QKAQTAYQALIATY---NQNRQ--LSLL 309
>gi|95928659|ref|ZP_01311406.1| flagellin-like [Desulfuromonas acetoxidans DSM 684]
gi|95135449|gb|EAT17101.1| flagellin-like [Desulfuromonas acetoxidans DSM 684]
Length = 294
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/181 (13%), Positives = 49/181 (27%), Gaps = 5/181 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M T S + L + + RV+ A+D+ + + +S
Sbjct: 1 MMRTTTTSVYRSMQLNIARAEDELNRLYMH--TEKRVNVASDDPSAVRAIENARSQMTMS 58
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQS 117
+ I +DI + ++M I+ TA + + E+ L+
Sbjct: 59 DRYIENIETVQDGMDIVDGYLDTVENIMQRIQEITTAAINSSLSDADAVTYADEVATLKE 118
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
QL D+A + + S+ + +
Sbjct: 119 QLVDVANTQVNGKYLFAGFTDDTQPFSVDAVSGDVSYDGTTDIKYVEVGPGETVQSNLTG 178
Query: 178 D 178
D
Sbjct: 179 D 179
Score = 41.7 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 18/270 (6%), Positives = 56/270 (20%)
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
+ + + + +
Sbjct: 1 MMRTTTTSVYRSMQLNIARAEDELNRLYMHTEKRVNVASDDPSAVRAIENARSQMTMSDR 60
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ + + Q T + A T +
Sbjct: 61 YIENIETVQDGMDIVDGYLDTVENIMQRIQEITTAAINSSLSDADAVTYADEVATLKEQL 120
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
++ ++ T S + YV+
Sbjct: 121 VDVANTQVNGKYLFAGFTDDTQPFSVDAVSGDVSYDGTTDIKYVEVGPGETVQSNLTGDV 180
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+ + V + A++ + I+ +G+ ++R+
Sbjct: 181 LFTDPVDVFAVFDDLEANLRAGDVAALQVSLDAIEPATDQIRTQRSLMGNDNARLEDNRA 240
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ ++ ++ + R DADM + ++
Sbjct: 241 MLEEVKLQMKTTLSRYEDADMIEVFSDMTQ 270
>gi|260853473|ref|YP_003227364.1| putative lateral flagellar hook-filament junction protein
[Escherichia coli O26:H11 str. 11368]
gi|260866419|ref|YP_003232821.1| putative lateral flagellar hook-filament junction protein
[Escherichia coli O111:H- str. 11128]
gi|257752122|dbj|BAI23624.1| predicted lateral flagellar hook-filament junction protein
[Escherichia coli O26:H11 str. 11368]
gi|257762775|dbj|BAI34270.1| predicted lateral flagellar hook-filament junction protein
[Escherichia coli O111:H- str. 11128]
gi|323178486|gb|EFZ64064.1| flagellar hook-associated protein 3 [Escherichia coli 1180]
Length = 309
Score = 60.9 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 65/187 (34%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q +++ +L V +++++G ++ +D+ + + A+
Sbjct: 3 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTN 182
Query: 181 TDGTERY 187
++ +
Sbjct: 183 VAASDFF 189
Score = 37.4 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 17/130 (13%), Positives = 41/130 (31%)
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + + VDT D +++ S+ +
Sbjct: 159 SYSYQGNSDHRQTTVSNGVEVDTNVAASDFFGSNLDVLNTLNSLSQELQNPDVDPADPQV 218
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ V +DT A+ +G + + + D + + ++ +G L D D
Sbjct: 219 QSDIQNAVDVVDTASDDLNASIASLGETQNTMSMLSDAQTDISTSNDELIGSLQDLDYGP 278
Query: 418 ESTRLSALQT 427
S + L+
Sbjct: 279 ASITFTGLEV 288
>gi|307087696|gb|ADN26825.1| flagellin [uncultured Borrelia sp.]
Length = 243
Score = 60.9 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 3/97 (3%)
Query: 54 KSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQS 110
S LS S + + + +++ V+ +K D SIQ
Sbjct: 1 NSQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQI 60
Query: 111 EITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
EI QL ++ IA + +N + L + A+
Sbjct: 61 EIEQLTDEINRIADQAQYNQMHMLSNKSAAQNVKTAE 97
Score = 44.3 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 13/130 (10%), Positives = 33/130 (25%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G+ W + + N A V N ++
Sbjct: 114 GSQASWTLRVHVGANQDEAIAVNIYAANVANLFNGEGAQAAPAQEGAQQEGVQAVPAPAA 173
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + +S I+ I+ T +G+ +R+ + +
Sbjct: 174 APVQGGVNSPINVTTAIDANMSLSKIEDAIRMVTDQRANLGAFQNRLESVKASTDYAIEN 233
Query: 403 VEKGVGRLVD 412
++ ++ D
Sbjct: 234 LKASYAQVKD 243
>gi|170021353|ref|YP_001726307.1| flagellar hook-associated protein 3 [Escherichia coli ATCC 8739]
gi|188492112|ref|ZP_02999382.1| flagellar hook-associated protein 3 [Escherichia coli 53638]
gi|169756281|gb|ACA78980.1| flagellar hook-associated protein 3 [Escherichia coli ATCC 8739]
gi|188487311|gb|EDU62414.1| flagellar hook-associated protein 3 [Escherichia coli 53638]
Length = 309
Score = 60.9 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 65/187 (34%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q +++ +L V +++++G ++ +D+ + + A+
Sbjct: 3 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTN 182
Query: 181 TDGTERY 187
++ +
Sbjct: 183 VAASDFF 189
Score = 39.0 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 42/134 (31%)
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + + VDT D +++ S+ +
Sbjct: 159 SYSYQGNSDHRQTTVSNGVEVDTNVAASDFFGSNLDVLNTLNSLSQELQDPDVDPADPQV 218
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ V +DT A+ +G + + + D + + ++ +G L D D
Sbjct: 219 QSDIQNAVDVVDTASDDLNASIASLGETQNTMSMLSDAQTDISTSNDELIGSLQDLDYGP 278
Query: 418 ESTRLSALQTQQQL 431
S + L+ +
Sbjct: 279 ASITFTGLEVAMEA 292
>gi|170768098|ref|ZP_02902551.1| flagellar hook-associated protein 3 [Escherichia albertii TW07627]
gi|170122864|gb|EDS91795.1| flagellar hook-associated protein 3 [Escherichia albertii TW07627]
Length = 317
Score = 60.5 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 54/141 (38%), Gaps = 6/141 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A ++ S +
Sbjct: 7 MMYQQNMRGITSSQAEWMKYGEQMSTGKRVVNPSDDPVAASQAVVLSQAQAQNSQYTLTR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIAR 124
+ KV + ++ + + + + + KI D S+ ++I ++ QL ++A
Sbjct: 67 TFATQKVSLEESVLGQVTTAIQSAQEKIVYASNGTLSDDDRASLATDIQGIRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASI 145
+ NG S
Sbjct: 127 TTDGNGRYIFAGYKTESAPFS 147
Score = 44.0 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 28/319 (8%), Positives = 74/319 (23%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITSSQAEWMKYGEQMSTGKRVVNPSDDPVAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K T + + + + ++
Sbjct: 61 QYTLTRTFATQKVSLEESVLGQVTTAIQSAQEKIVYASNGTLSDDDRASLATDIQGIRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G ++ G + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTESAPFSETDGEYIGGKESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
N + S + + + D A+++ + +
Sbjct: 181 NNITSNAVKEPDGSSSETNLFAMLDSAIAALKIPVEESEVDKETAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QT Q +
Sbjct: 241 NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSYVMQQTALQAS 300
Query: 433 VQALSIVNNSTARILSLFR 451
+A + + LSLF+
Sbjct: 301 YKAF-----TDMQGLSLFQ 314
>gi|118581856|ref|YP_903106.1| flagellar hook-associated protein 3 [Pelobacter propionicus DSM
2379]
gi|118504566|gb|ABL01049.1| flagellar hook-associated protein 3 [Pelobacter propionicus DSM
2379]
Length = 295
Score = 60.5 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/202 (13%), Positives = 68/202 (33%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N +A +A ++ L+ + ++++S L V+ +D+ S+ A+
Sbjct: 3 ITANATAFNALYNIQQGRSKLDTLTEKIASELNVNRPSDDPIATSLLLSTNDRLQAVEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I ++ + + + D ++T K+ ++ +D + +S + QL + +A
Sbjct: 63 GSNISKTNTWLSMTSTALQGISDTLTTAKSLMSTIGSGTSDQTARESVVAQLTALREQLA 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ + + +GS + + V ID E +
Sbjct: 123 DFGNTKYLDQYLFSGSQTATKPFDRTVGSIGYNGDSIVNSIRIDSAATEELNITGDQVLT 182
Query: 184 TERYGLLDRNHKIKVEPQVLKD 205
+ + + D
Sbjct: 183 SSTGVNILDTMDQLITAVTNND 204
>gi|283780144|ref|YP_003370899.1| flagellin domain-containing protein [Pirellula staleyi DSM 6068]
gi|283438597|gb|ADB17039.1| flagellin domain protein [Pirellula staleyi DSM 6068]
Length = 1003
Score = 60.5 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 57/147 (38%), Gaps = 8/147 (5%)
Query: 6 TNHSAMSASQ----KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
T S++ A +L+ ++ +Q ++S+G R++ +++A A ++ +
Sbjct: 10 TRTSSILAQTRLTAQLQADQLSILRLQSQISTGRRIALPSEDAPASQRAIHLQQLLELKA 69
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQ 118
+ S +D + ++ ++ I++ T + +E+++ Q
Sbjct: 70 QALVNLDTSQSYLDATDSAIANVSSTLNQIRSTALGVANTTSSETTRAAAAAEVSRAIEQ 129
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASI 145
L D+A +F G ++
Sbjct: 130 LVDVA-NQNFRGRYLFAGSKTTTVPFT 155
Score = 43.6 bits (100), Expect = 0.062, Method: Composition-based stats.
Identities = 13/124 (10%), Positives = 42/124 (33%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T V S V + + + + +++ + +D +
Sbjct: 869 TTGVVGITSGGTAEVLTGANTYHQEVQGVFNTLIQLRDAINNFDLASIDRSLESLDVDLD 928
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+IG+ + L ++ ++ + + ++ D+ + L+A Q + ++
Sbjct: 929 RINFGRAEIGARGQALDLLRTRLEDEEVTLKDSLSKEIEVDITQAISELAARQASLEASM 988
Query: 434 QALS 437
Q ++
Sbjct: 989 QLMA 992
>gi|145845969|gb|ABP96974.1| flagellin [Cronobacter sakazakii]
Length = 189
Score = 60.5 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 3/166 (1%)
Query: 51 QIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KS 107
M S ++ + G S V A+ +++ + I+ S S
Sbjct: 1 NRMTSQVKGMTQAARNANDGISLVQTAEGNLNEINTNLQRIRELAVQAANDTNGSTDLTS 60
Query: 108 IQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTID 167
I +EITQ S++ IA G++FNG+ L + ++ + S +
Sbjct: 61 INTEITQRLSEIDRIAGGANFNGKKLLDGSVSTALKIQVGAGTSSNDTISIDSKALINAT 120
Query: 168 YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ + + + + + + I ++
Sbjct: 121 SGTLDSALSTSIADNSSAQAVISAADAAIAKIDTARSNMGAIQNRF 166
>gi|322714171|gb|EFZ05742.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 317
Score = 60.5 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/182 (13%), Positives = 52/182 (28%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + +++S+G RV++ +D+ S A ++ S
Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLSQAQAQNSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ A + KV + ++ +S+ + T + KI S T LQ +
Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N G T + V +
Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQQVDSARTMVIGHTGAQIFNS 182
Query: 184 TE 185
Sbjct: 183 IT 184
>gi|258404736|ref|YP_003197478.1| flagellar hook-associated protein 3 [Desulfohalobium retbaense DSM
5692]
gi|257796963|gb|ACV67900.1| flagellar hook-associated protein 3 [Desulfohalobium retbaense DSM
5692]
Length = 292
Score = 60.5 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/219 (9%), Positives = 71/219 (32%), Gaps = 3/219 (1%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
++ IN +Q + ++G ++++ +D+ ++ + + + +
Sbjct: 13 QTEIGRINEKTADLQKQAATGKKINEVSDDPTAVRPILNYRTQIESSDRYTRNMDAAKTG 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSE---ITQLQSQLRDIARGSSFNG 130
+ + +A D++ K + A + + + + L+ +L +A S
Sbjct: 73 LKNYDYQLGRAFDLLVQAKEQTVAAGNGALRDEDMATMGKIVEGLREELLGVANSQSDGR 132
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+ + + + + G +D + + V ++ D
Sbjct: 133 YIFAGYEEDTKPFADDGTFNGDDNTRTLEIAPGEEVDISVSGKEVFASTTPDNIFETLQN 192
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSG 229
++ + S+ + T+S+ + + T
Sbjct: 193 ISTAMKDPAIEIDSNDVESLQEVMDTVSSTRADVGTRIN 231
Score = 50.5 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
V + + ++ +G+ +R+ + + +++ + DAD+ S++L
Sbjct: 209 VESLQEVMDTVSSTRADVGTRINRLESAVSYREKAVLDMKEFLSDYEDADIVEVSSQLMQ 268
Query: 425 LQTQQQLAVQALSIVNNSTARILSLF 450
+T + A+ + + LSL
Sbjct: 269 QETSLKAALAVTTKIGQ-----LSLL 289
>gi|117923381|ref|YP_863998.1| flagellin domain-containing protein [Magnetococcus sp. MC-1]
gi|117607137|gb|ABK42592.1| flagellin domain protein [Magnetococcus sp. MC-1]
Length = 268
Score = 60.5 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 52/139 (37%), Gaps = 3/139 (2%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
S+ N ++A Q + + ++ +S R A + + A M + +
Sbjct: 3 LSVNPNAFWLNAQQSVNGSALGIGKSTEQRTSSKRAHVAKQDQQVLA-AAAMTAKVRERN 61
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG--TDSKSIQSEITQLQSQL 119
S A G S + +A+ + + + ++ + G + + +I L +++
Sbjct: 62 QESHATNDGISVIQVAQEALYQTTSTLEKVRCLTQVLEDGGVAQQKEGVCEQIEVLLAEI 121
Query: 120 RDIARGSSFNGENWLRTDL 138
IA + FN + + T
Sbjct: 122 DRIAAQTVFNQQTLISTGG 140
Score = 38.2 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 2/80 (2%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ +D + ++G + R + I + + G R+ A +A E+
Sbjct: 183 VLKQVDNAMTSVADMRAQLGDMQVRFKEIIEQIAQVEA--KNGGVRIRSAQVAREAALHV 240
Query: 424 ALQTQQQLAVQALSIVNNST 443
Q ++ N
Sbjct: 241 KGSIQIFSDRSIVAQANQQP 260
>gi|300817262|ref|ZP_07097480.1| flagellar hook-associated protein 3 [Escherichia coli MS 107-1]
gi|300530238|gb|EFK51300.1| flagellar hook-associated protein 3 [Escherichia coli MS 107-1]
Length = 317
Score = 60.5 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 65/187 (34%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q +++ +L V +++++G ++ +D+ + + A+
Sbjct: 11 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQY 70
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 71 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 130
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 131 AALNYQDEDGHYVFGGTINDQPPIVAVDNDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTN 190
Query: 181 TDGTERY 187
++ +
Sbjct: 191 VAASDFF 197
Score = 39.3 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 19/167 (11%), Positives = 47/167 (28%)
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ T + + + + VDT
Sbjct: 134 NYQDEDGHYVFGGTINDQPPIVAVDNDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTNVAA 193
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
D +++ S+ +A+ + ++ V +DT A+ +G
Sbjct: 194 SDFFGSNLDVLNTLNSLSQELQDPNADPADPQVQSDIQNAVDVVDTASDDLNASIASLGE 253
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ + + D + + ++ +G L D D S + L+ +
Sbjct: 254 TQNTMSMLSDAQTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEA 300
>gi|56413829|ref|YP_150904.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62179701|ref|YP_216118.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161614592|ref|YP_001588557.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167553028|ref|ZP_02346778.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|168234110|ref|ZP_02659168.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168244783|ref|ZP_02669715.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168264023|ref|ZP_02685996.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168467137|ref|ZP_02700979.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168822628|ref|ZP_02834628.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194445556|ref|YP_002040438.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194450508|ref|YP_002045183.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194469278|ref|ZP_03075262.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|197248976|ref|YP_002146859.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197362752|ref|YP_002142389.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|198242414|ref|YP_002215953.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200389316|ref|ZP_03215927.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204930742|ref|ZP_03221615.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|207857308|ref|YP_002243959.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224584312|ref|YP_002638110.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238910996|ref|ZP_04654833.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|56128086|gb|AAV77592.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62127334|gb|AAX65037.1| flagellar biosynthesis; hook-filament junction protein [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|161363956|gb|ABX67724.1| hypothetical protein SPAB_02342 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404219|gb|ACF64441.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194408812|gb|ACF69031.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194455642|gb|EDX44481.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|195630416|gb|EDX49042.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197094229|emb|CAR59734.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197212679|gb|ACH50076.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197936930|gb|ACH74263.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199601761|gb|EDZ00307.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204320201|gb|EDZ05405.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205322419|gb|EDZ10258.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205331930|gb|EDZ18694.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205336402|gb|EDZ23166.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205341000|gb|EDZ27764.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205347330|gb|EDZ33961.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206709111|emb|CAR33444.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224468839|gb|ACN46669.1| flagellar hook-associated protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|320086376|emb|CBY96149.1| Flagellin A Flagellin core protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|322616554|gb|EFY13463.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322620505|gb|EFY17369.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622499|gb|EFY19344.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629650|gb|EFY26425.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632630|gb|EFY29376.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636875|gb|EFY33578.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322641587|gb|EFY38225.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646486|gb|EFY42996.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650023|gb|EFY46441.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653948|gb|EFY50271.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322658480|gb|EFY54742.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663338|gb|EFY59540.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322670072|gb|EFY66212.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674864|gb|EFY70955.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676666|gb|EFY72733.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682588|gb|EFY78607.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686659|gb|EFY82638.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323195773|gb|EFZ80949.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198335|gb|EFZ83439.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323204843|gb|EFZ89837.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323209184|gb|EFZ94121.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323213432|gb|EFZ98228.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217856|gb|EGA02571.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222144|gb|EGA06528.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224916|gb|EGA09174.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229658|gb|EGA13781.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323232883|gb|EGA16979.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240618|gb|EGA24660.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323242932|gb|EGA26953.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323250250|gb|EGA34139.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252624|gb|EGA36462.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323258848|gb|EGA42501.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323261037|gb|EGA44630.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266946|gb|EGA50431.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269987|gb|EGA53436.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326623701|gb|EGE30046.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
Length = 317
Score = 60.5 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/193 (12%), Positives = 55/193 (28%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + +++S+G RV++ +D+ S A ++ S
Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLSQAQAQNSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ A + KV + ++ +S+ + T + KI S T LQ +
Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N G T + V +
Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQQVDSARTMVIGHTGAQIFNS 182
Query: 184 TERYGLLDRNHKI 196
+ + +
Sbjct: 183 ITSNAVPEPDGSD 195
>gi|229591864|ref|YP_002873983.1| flagellar hook-associated protein FlgL [Pseudomonas fluorescens
SBW25]
gi|229363730|emb|CAY51131.1| putative flagellar hook-associated protein 3 [Pseudomonas
fluorescens SBW25]
Length = 540
Score = 60.5 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/255 (10%), Positives = 65/255 (25%), Gaps = 2/255 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T +++ K ++ + Q++ SSG+RV A D+ +++ L+
Sbjct: 3 ISTQQYFDTSAAKYQNNYSGVVQAQEQASSGVRVQTAGDDPVAAQRLLMLQQQKDMLAQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG--VERGTDSKSIQSEITQLQSQLRD 121
S I S + ++ ++ + V D KSI E+ L+ QL
Sbjct: 63 SGNISNIQSSLTNEESVLTAISATIQAASQLALKAGGVTSDADRKSISVEVGALEDQLLG 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ G + + D ++ + + +
Sbjct: 123 LLNSKDAAGNYLFSGSKTETPPYSRNIDGTYNYQGDENELSLQVSETLTVRAGDTGKTIL 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+G + + + + ++
Sbjct: 183 EGAANNSRTQTKYTTPAPVPPATTPSQVDDNKVAISAGLVTSGVDYNKSFADGQPYKLTF 242
Query: 242 AKGIATIPVPLPAAP 256
+
Sbjct: 243 TSSTQYVVTDKNNND 257
Score = 43.2 bits (99), Expect = 0.081, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 38/93 (40%), Gaps = 5/93 (5%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ A+ VS + + G IG+ + + +Q + + A + + L + DM
Sbjct: 450 QDALNSAVSNLTSSSDQVDNVRGSIGARQNALTVQSSENESVGLANKTTMSALANIDMGE 509
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ L+ QT + + A ++ LSLF
Sbjct: 510 AAINLTLQQTMLEASQLAFVKISQ-----LSLF 537
>gi|161503728|ref|YP_001570840.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865075|gb|ABX21698.1| hypothetical protein SARI_01813 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 317
Score = 60.5 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/193 (13%), Positives = 55/193 (28%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + +++SSG RV++ +D+ S A ++ S
Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSSGKRVTNPSDDPIAASQAVVLSQAQAQNSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ A + KV + ++ +S+ + T + KI S T LQ +
Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N G T + V +
Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGNYHGGEKNVTQQVDSARTMVIGHTGAQIFNS 182
Query: 184 TERYGLLDRNHKI 196
+ + +
Sbjct: 183 LTSNAVPEPDGTD 195
>gi|312962288|ref|ZP_07776779.1| flagellar hook-associated protein FlgL [Pseudomonas fluorescens
WH6]
gi|311283215|gb|EFQ61805.1| flagellar hook-associated protein FlgL [Pseudomonas fluorescens
WH6]
Length = 527
Score = 60.5 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 54/155 (34%), Gaps = 3/155 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T ++S K +D + QD+ S+G+RV A+D+ + +++ L
Sbjct: 3 ISTQQYFDTSSTKYQDNYSGVVKAQDQASTGVRVQTASDDPVAAAQLLMLQQQKDMLGQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ I + ++ ++ +S M T D K+I +++ L+ +
Sbjct: 63 NGNITTLQNSLNNEESVLSSISLAMQTASGLALQAGNLQMSNDDRKAIAAQVGALEDHVL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR 155
+ +G + + +
Sbjct: 123 GLLNSKDSSGNYMFSGAKTDTPPYSRNNDGTYTYQ 157
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 36/318 (11%), Positives = 77/318 (24%), Gaps = 5/318 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ + + + + E + E ++
Sbjct: 212 LVTSGTAYTKSFADGQPYKLTFASSTQYSVTDNAGNDVTSEITGNGTFDSTKEGAASVNL 271
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
L S + ++ K+F L + + + A+ + V
Sbjct: 272 RGVKFDITLNLGAGVASGPPSDALVAGKEFTLESKPDTFSSSRTASNASTAQLTGGRVTD 331
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
AA A+ SG + A + + T + + T G
Sbjct: 332 QAAYASTFPNSGAVIKFTSGTAYDVYAQPYTVDSKSIASGTIAAGATTVTTVGVTFDVSG 391
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + K + + +
Sbjct: 392 TPGAGDQFSIGATSNKNMNALDTLGQLRKALEAPADGDLIARAKLKDVINTSIGNLANAD 451
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
G IG+ + + +Q + A + L + DM + L+ QT Q +
Sbjct: 452 AQINQVRGSIGARQNALDIQGQENTSLGLANTSTMSSLANVDMGQAAIDLTLQQTMLQAS 511
Query: 433 VQALSIVNNSTARILSLF 450
A ++ LSLF
Sbjct: 512 QLAFVKISQ-----LSLF 524
>gi|218680995|ref|ZP_03528892.1| flagellin C protein [Rhizobium etli CIAT 894]
Length = 104
Score = 60.5 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/103 (43%), Positives = 65/103 (63%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI S +A LRDIN ++V Q+ V++G RV+ A+DNA YWS+A ++DN A+SA
Sbjct: 2 SIYQRVSVDAALHVLRDINRKMDVTQNHVTTGQRVAKASDNAVYWSVATTARTDNKAISA 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS 105
V DA+G+ ++ + A G+ IDV+S IK K+ A E G D
Sbjct: 62 VQDALGMAAATMGTAYTGVQNVIDVVSEIKAKLVAASEDGVDK 104
>gi|168237267|ref|ZP_02662325.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|194736765|ref|YP_002114183.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194712267|gb|ACF91488.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197289761|gb|EDY29122.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
Length = 317
Score = 60.5 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/193 (12%), Positives = 55/193 (28%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + +++S+G RV++ +D+ S A ++ S
Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLSQAQAQNSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ A + KV + ++ +S+ + T + KI S T LQ +
Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N G T + V +
Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQQVDSARTMVIGHTGAQIFNS 182
Query: 184 TERYGLLDRNHKI 196
+ + +
Sbjct: 183 ITSNAVPEPDGSD 195
>gi|116872095|ref|YP_848876.1| flagellar hook-associated protein FlgL [Listeria welshimeri serovar
6b str. SLCC5334]
gi|116740973|emb|CAK20093.1| flagellar hook-associated protein FlgL, putative [Listeria
welshimeri serovar 6b str. SLCC5334]
Length = 291
Score = 60.5 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/218 (13%), Positives = 66/218 (30%), Gaps = 3/218 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A S +L +++ NL Q +VSSG + ++N + L+
Sbjct: 3 ISTNQQANSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQLNRE 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLR 120
+ S ++ A+ +S M+ + + + +D ++ EI L L
Sbjct: 63 KTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTSDKNNMSQSAEEIKGLLDVLV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + + + K+ + D +
Sbjct: 123 SVANAEDDGRYVFSGSSTSVKPFTTDKTTGEIIYNGTTENKKFRVTDTLEVEVFHDGSAM 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
TD + K + + + + + +
Sbjct: 183 TDVFNNIQKIVDAMKSGDKDALSALQETNSQNIEIITN 220
>gi|300716225|ref|YP_003741028.1| Hook-filament junction protein [Erwinia billingiae Eb661]
gi|299062061|emb|CAX59177.1| Hook-filament junction protein [Erwinia billingiae Eb661]
Length = 319
Score = 60.5 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/213 (10%), Positives = 55/213 (25%), Gaps = 3/213 (1%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ + + V +++SSG RV + +D+ + A ++ S S A G ++ +
Sbjct: 14 RGISSSQASWLKVGEQLSSGKRVVNPSDDPVAAAQAVVLSQAQAQTSQYSTARGFATNNI 73
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL---QSQLRDIARGSSFNGE 131
+ + + V+ + + A S QL + QL ++A + NG
Sbjct: 74 SQEETNLQQVTSVVQQAQTIVVAAANGTLSDDDRASYAQQLTGIRDQLLNLANTTDGNGR 133
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
+ + + +
Sbjct: 134 YMFAGYQTDKAPFTQDANGDVTYVGGDTPISQKVDSNRTMVTNHTGSQVFTSLTSNPTAE 193
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
+ + S +
Sbjct: 194 PDGSASESNIFTTLNTAIKALNTPLESADQATS 226
Score = 37.8 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 25/251 (9%), Positives = 68/251 (27%), Gaps = 7/251 (2%)
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
+ ++S + + T + A T + D A
Sbjct: 54 QAQAQTSQYSTARGFATNNISQEETNLQQVTSVVQQAQTIVVAAANGTLSDDDRASYAQQ 113
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
+ T+ +G + + +++ V ++ S +N T+
Sbjct: 114 LTGIRDQLLNLANTTDGNGRYMFAGYQTDKAPFTQDANGDVTYVGGDTPISQKVDSNRTM 173
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ ++ + D + ++ + I ++ + + +
Sbjct: 174 VTNHTGSQVFTSLTSNPTAEPDGSASESNIFTTLNTAIKALNTPLESADQATSDAASAAL 233
Query: 369 D-------TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
D + A +G+ + + + + + LVD D S +
Sbjct: 234 DKTNRGLKNSLNNVLAVRSVLGTQLTELDNLDSKGDDTKVNQATQMSNLVDVDYTSAISS 293
Query: 422 LSALQTQQQLA 432
+ QT Q +
Sbjct: 294 YTMQQTALQAS 304
>gi|295096218|emb|CBK85308.1| flagellar hook-associated protein 3 [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 311
Score = 60.5 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/172 (12%), Positives = 50/172 (29%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+++S+G R++ +D+ S A ++ S + A ++KV + + +S+ +
Sbjct: 22 EQMSTGKRINRPSDDPIAASQAVVLSQAQTQNSQYALARSFATTKVSLEENVLSQVTTAI 81
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
+ KI S T LQ + ++ N G T + A
Sbjct: 82 QAAQEKIVNAGNGTLSDDDRASLATNLQGIRDQLMNLANSTDGNGRYIFSGYKTEAAAFD 141
Query: 149 VIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
+ + + D + +
Sbjct: 142 QTTGDYKGGGTPISQQVDSARTMQISHTGTEVFDSFTSNAKPEPDGSAPETN 193
>gi|84502366|ref|ZP_01000502.1| flagellin family protein [Oceanicola batsensis HTCC2597]
gi|84389178|gb|EAQ01975.1| flagellin family protein [Oceanicola batsensis HTCC2597]
Length = 268
Score = 60.5 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 1/155 (0%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M+A LR IN +L Q R+S+GL+++ DNAAY+SI++ M D+G A+ + + L
Sbjct: 1 MTALSTLRQINNDLTETQGRISTGLKIASGKDNAAYFSISKTMAGDSGMFKAIDETLTLQ 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD-SKSIQSEITQLQSQLRDIARGSSFN 129
+ V A+ G +++ + ++ + +Q+E+ +L +++ S+FN
Sbjct: 61 KNAVSTARLGAETLVELANDFVERVAFAQGGTEEVRADVQAELDELVARMTTTIAQSTFN 120
Query: 130 GENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQIT 164
G +++ + + G I
Sbjct: 121 GTDYVNAATTVTLVTGISRAAGGTISTTTMSFMQQ 155
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 64/159 (40%)
Query: 293 TKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANT 352
+I V + ++ N
Sbjct: 110 MTTTIAQSTFNGTDYVNAATTVTLVTGISRAAGGTISTTTMSFMQQDLGAIASVMNAINV 169
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
+ A ++ + Q+ A AAA +G I Q++F+ + D ++ G+G ++D
Sbjct: 170 TTADSAGAQVAVLQQAEAQLSAAVAAATSLGIAERSIETQKEFLAELTDKLDSGIGSMID 229
Query: 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
ADM E+ RL A Q QQQLA Q+LSI N+S ILSLF+
Sbjct: 230 ADMEQEAARLQAQQVQQQLATQSLSIANSSPQNILSLFQ 268
>gi|289803847|ref|ZP_06534476.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 274
Score = 60.5 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/193 (12%), Positives = 55/193 (28%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + +++S+G RV++ +D+ S A ++ S
Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLFQAQAQNSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ A + KV + ++ +S+ + T + KI S T LQ +
Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N G T + V +
Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQQVDSARTMVIGHTGAQIFNS 182
Query: 184 TERYGLLDRNHKI 196
+ + +
Sbjct: 183 ITSNAVPEPDGSD 195
>gi|91785626|ref|YP_560832.1| flagellar hook-associated protein FlgL [Burkholderia xenovorans
LB400]
gi|91689580|gb|ABE32780.1| Flagellar hook-associated protein [Burkholderia xenovorans LB400]
Length = 407
Score = 60.5 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/335 (14%), Positives = 96/335 (28%), Gaps = 3/335 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + D L + +SSG+ +S +DN + A + S LS
Sbjct: 3 ISSTQYFNMNVATMSDQQAQLSQLYAEISSGVSLSTPSDNPLGAAQAVQLSSTATTLSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ G + + + V+ TI + G D SI +++ L+SQL
Sbjct: 63 TTNQGTALASLQQEDTTLGSVNTVLQTIHTLVLRAGDGSLNDGDRGSIATQLQSLRSQLM 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G S+ S D G + D ++ S
Sbjct: 123 TLANSTDPQGNYLFAGYQSSAQPYTTNSAGVVTYSGDTGTPAVQITDSHVVQTGDNGISI 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G VS+ + + + K+ + +S +
Sbjct: 183 FGSVAPIGTSAVPAATTGNTGTGVISSVSLNNPTDPTNADKYSINFSSATTYTVSQTDPA 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ P A A + + +P+ S T + V A IT+
Sbjct: 243 TGAVTTSAPQAFTAGSAITLGGQSVTITGAPNAGDSFTVTPATQGSMDVFANLSQLITTL 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
+ + + + ++ ++
Sbjct: 303 QTPVSGGASTASFQSALTTSMAQLENTMNNVVTAQ 337
>gi|307087700|gb|ADN26827.1| flagellin [uncultured Borrelia sp.]
Length = 172
Score = 60.5 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 34/96 (35%), Gaps = 3/96 (3%)
Query: 55 SDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSE 111
S LS S + + + +++ V+ +K D SIQ E
Sbjct: 1 SQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIE 60
Query: 112 ITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
I QL ++ IA + +N + L + A+
Sbjct: 61 IEQLTDEINRIADQAQYNQMHMLSNKSAAQNVKTAE 96
>gi|205353080|ref|YP_002226881.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205272861|emb|CAR37788.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|326628159|gb|EGE34502.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 317
Score = 60.5 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/193 (12%), Positives = 55/193 (28%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + +++S+G RV++ +D+ S A ++ S
Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLSQAQAQNSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ A + KV + ++ +S+ + T + KI S T LQ +
Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N G T + V +
Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQQVDSARTMVIGHTGVQIFNS 182
Query: 184 TERYGLLDRNHKI 196
+ + +
Sbjct: 183 ITSNAVPEPDGSD 195
>gi|218694617|ref|YP_002402284.1| flagellar hook-associated protein FlgL [Escherichia coli 55989]
gi|307310139|ref|ZP_07589789.1| flagellar hook-associated protein 3 [Escherichia coli W]
gi|218351349|emb|CAU97055.1| flagellar hook-filament junction protein [Escherichia coli 55989]
gi|306909857|gb|EFN40351.1| flagellar hook-associated protein 3 [Escherichia coli W]
gi|315060361|gb|ADT74688.1| flagellar hook-filament junction protein [Escherichia coli W]
gi|320200979|gb|EFW75563.1| Flagellar hook-associated protein FlgL [Escherichia coli EC4100B]
gi|323379078|gb|ADX51346.1| flagellar hook-associated protein 3 [Escherichia coli KO11]
Length = 317
Score = 60.5 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 6/141 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A ++ S + A
Sbjct: 7 MMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLAR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
+ KV + ++ +S+ + + KI D S+ ++I L+ QL ++A
Sbjct: 67 TFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASI 145
+ NG +
Sbjct: 127 TTDGNGRYIFAGYKTETAPFS 147
Score = 41.3 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 72/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNELESLDLLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|118581732|ref|YP_902982.1| flagellin domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118504442|gb|ABL00925.1| flagellin domain protein [Pelobacter propionicus DSM 2379]
Length = 300
Score = 60.5 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 69/200 (34%), Gaps = 2/200 (1%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI + L++ N + Q+R+S+G +V+ A DN + AQ + L+
Sbjct: 4 SISLTAGMRNNLLALQNTNKLMTQTQNRLSTGKKVNSALDNPTNFFAAQAHTNRASDLTN 63
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIK--NKITAGVERGTDSKSIQSEITQLQSQLR 120
DA+ V+ A AG++ ++ + + TD + +L Q+
Sbjct: 64 RKDAMSEAVQGVNAADAGITAITALIESAQGIASAALASASTTDRANYAVTYNELMGQIN 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A S + G N+L D + + I+ ++ T +S+
Sbjct: 124 KLASDSGYRGTNFLTNDDLTVEFAPGTGDATLKIQGFTATSVGLSLQTVGVGSTHGTESA 183
Query: 181 TDGTERYGLLDRNHKIKVEP 200
+ +
Sbjct: 184 AATSAVNDTYGTDTDWDTST 203
Score = 60.1 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/209 (14%), Positives = 67/209 (32%)
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
A+GIA+ + + N + ++ G + + T
Sbjct: 92 AQGIASAALASASTTDRANYAVTYNELMGQINKLASDSGYRGTNFLTNDDLTVEFAPGTG 151
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
T + + S + T + + A+
Sbjct: 152 DATLKIQGFTATSVGLSLQTVGVGSTHGTESAAATSAVNDTYGTDTDWDTSTIGDGNNAI 211
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ ++ + + + K+ + S + ++DF M + ++ G L AD E
Sbjct: 212 KSSSKQLEDALSTLRSESSKLSANLSIVTTRQDFTDNMINTLKTGADNLTLADTNEEGAN 271
Query: 422 LSALQTQQQLAVQALSIVNNSTARILSLF 450
+ LQT+Q L +LS+ + + +L LF
Sbjct: 272 MLMLQTRQSLGTTSLSLASQAAQAVLQLF 300
>gi|16764540|ref|NP_460155.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|197263254|ref|ZP_03163328.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|120305|sp|P16326|FLGL_SALTY RecName: Full=Flagellar hook-associated protein 3; Short=HAP3;
AltName: Full=Hook-filament junction protein
gi|47682|emb|CAA36028.1| HAP3 [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|16419701|gb|AAL20114.1| hook-filament junction protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|197241509|gb|EDY24129.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|261246395|emb|CBG24204.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267992958|gb|ACY87843.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301157725|emb|CBW17217.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312912171|dbj|BAJ36145.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321223802|gb|EFX48865.1| Flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323129454|gb|ADX16884.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
Length = 317
Score = 60.5 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/193 (12%), Positives = 55/193 (28%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + +++S+G RV++ +D+ S A ++ S
Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLSQAQAQNSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ A + KV + ++ +S+ + T + KI S T LQ +
Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N G T + V +
Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQQVDSARTMVIGHTGAQIFNS 182
Query: 184 TERYGLLDRNHKI 196
+ + +
Sbjct: 183 ITSNAVPEPDGSD 195
>gi|296157448|ref|ZP_06840283.1| flagellar hook-associated protein 3 [Burkholderia sp. Ch1-1]
gi|295892220|gb|EFG72003.1| flagellar hook-associated protein 3 [Burkholderia sp. Ch1-1]
Length = 407
Score = 60.1 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/335 (14%), Positives = 96/335 (28%), Gaps = 3/335 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + D L + +SSG+ +S +DN + A + S LS
Sbjct: 3 ISSTQYFNMNVATMSDQQAQLSQLYAEISSGVSLSTPSDNPLGAAQAVQLSSTATTLSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ G + + + V+ TI + G D SI +++ L+SQL
Sbjct: 63 TTNQGTALASLQQEDTTLGSVNTVLQTIHTLVLRAGDGSLNDGDRGSIATQLQSLRSQLM 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G S+ S D G + D ++ S
Sbjct: 123 TLANSTDPQGNYLFAGYQSSAQPYTTNSAGVVTYSGDTGTPVVQITDSHVVQTGDNGISI 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G VS+ + + + K+ + +S +
Sbjct: 183 FGSVAPIGTSAVPAATTGNTGTGVISSVSLNNPTDPTNADKYSINFSSATTYTVSQTDPA 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ P A A + + +P+ S T + V A IT+
Sbjct: 243 TGAVTTSAPQAFTAGSAITLGGQSVTITGAPNAGDSFTVTPATQGSMDVFANLSQLITTL 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
+ + + + ++ ++
Sbjct: 303 QTPVSGGASTASFQSALTTSMAQLENTMNNVVTAQ 337
>gi|34497165|ref|NP_901380.1| flagellar hook-associated protein FlgL [Chromobacterium violaceum
ATCC 12472]
gi|34103022|gb|AAQ59385.1| flagellar hook-associated protein 3 [Chromobacterium violaceum ATCC
12472]
Length = 302
Score = 60.1 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/288 (10%), Positives = 81/288 (28%), Gaps = 2/288 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +N +++ + + + ++SSG + ++N ++ + +L
Sbjct: 3 ISSNQYQSVVLLAMQNSSAGMSELLQKMSSGQSMLVPSENPIASVRLLRLQREEASLQQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE--RGTDSKSIQSEITQLQSQLRD 121
D IG S++ + + + ++ + A D K++ S + L+ +
Sbjct: 63 RDNIGALKSQLTKNETLLDGISANLRDARDLLVAAANQPPTDDLKAMASPLVSLRDSILY 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
A G ++ A + + R + T + +
Sbjct: 123 AANTKDSEGRYMFSGSAVNNAAIVVDDTQPAGSRYRYNGNGDRQRVTVGEGVTEASNVTL 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ ++ L D +V + G + +
Sbjct: 183 ESMAPLLNQLDKAIATLQSPTLDSKDPAVGATIREVMGGVDTALDRVGGTISELGGAQNV 242
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
K + L A G+ + +A + + + S
Sbjct: 243 LKTLDGNHDSLSLANQESIIELGSLDYGTAYIAMNNLSMALQTSQKAY 290
>gi|167579497|ref|ZP_02372371.1| flagellar hook-associated protein FlgL [Burkholderia thailandensis
TXDOH]
Length = 410
Score = 60.1 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 56/451 (12%), Positives = 116/451 (25%), Gaps = 50/451 (11%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I ++ + D + + +VSSG+ ++ ADN + A + + + LS
Sbjct: 3 ISSSQLYSLNVDMMNDQQAQIAQLYQQVSSGISLTTPADNPLAAAQAVQLSATSATLSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMS---TIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + + + ++ DV++ G +D ++ ++I + L
Sbjct: 63 TQNQTIVQTALQTESTTLTSVNDVLNAAYQSIMHAGDGGLSDSDRAALAAQIQGSRDHLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G ++ K G D G + D + S
Sbjct: 123 TLANTADGAGNYLFAGFQPTTQPFSNKPGGGVTYAGDYGARTVQIADTRTVSQGDNGASV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G L VS+ + S +T +F +
Sbjct: 183 FMSVPFLGSLPVPAAGASNTGTGTIGAVSITNPSDPTNTHQFTI---------------- 226
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ T + + +S I +G + V T T
Sbjct: 227 -----TFGGTAAAPTYTVTDNTVTPPTTTAAQPYSSGQGINLGGQTVAVSGTPAVGDTFT 281
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
A V T V T + T
Sbjct: 282 VTPAPQAGADVFATLDTVIAALKTPVGNSPTASTALTNTLATTS---------------- 325
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + + +G + + + L ++ + +
Sbjct: 326 -----TKLMNTMTNVLTVQASVGGRLQEVKAMQSVTSTNSLQTTNSLSNLTATNLPAAIS 380
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ LQ A +A + LSLF+
Sbjct: 381 QFLQLQNSLSAAQKAFVQ-----MQNLSLFQ 406
>gi|170020521|ref|YP_001725475.1| flagellar hook-associated protein FlgL [Escherichia coli ATCC 8739]
gi|169755449|gb|ACA78148.1| flagellar hook-associated protein 3 [Escherichia coli ATCC 8739]
gi|320173536|gb|EFW48732.1| Flagellar hook-associated protein FlgL [Shigella dysenteriae CDC
74-1112]
Length = 317
Score = 60.1 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 6/141 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A ++ S + A
Sbjct: 7 MMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLAR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
+ KV + ++ +S+ + + KI D S+ ++I L+ QL ++A
Sbjct: 67 TFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASI 145
+ NG +
Sbjct: 127 TTDGNGRYIFAGYKTETAPFS 147
Score = 42.0 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 72/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|307313512|ref|ZP_07593133.1| flagellar hook-associated protein 3 [Escherichia coli W]
gi|306906680|gb|EFN37191.1| flagellar hook-associated protein 3 [Escherichia coli W]
gi|315059549|gb|ADT73876.1| flagellar hook-filament junction protein [Escherichia coli W]
gi|323379892|gb|ADX52160.1| flagellar hook-associated protein 3 [Escherichia coli KO11]
Length = 309
Score = 60.1 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 65/187 (34%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q +++ +L V +++++G ++ +D+ + + A+
Sbjct: 3 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTN 182
Query: 181 TDGTERY 187
++ +
Sbjct: 183 VAASDFF 189
Score = 38.6 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 44/134 (32%)
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + + VDT D +++ S+ +A+
Sbjct: 159 SYSYQGNSDHRQTTVSNGVEVDTNVAASDFFGSNLDVLNTLNSLSQELQDPNADPADPQV 218
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ V +DT A+ +G + + + D + + ++ +G L D D
Sbjct: 219 QSDIQNAVDVVDTASDDLNASIASLGETQNTMSMLSDAQTDISTSNDELIGSLQDLDYGP 278
Query: 418 ESTRLSALQTQQQL 431
S + L+ +
Sbjct: 279 ASITFTGLEVAMEA 292
>gi|191168484|ref|ZP_03030272.1| flagellar hook-associated protein 3 [Escherichia coli B7A]
gi|190901503|gb|EDV61264.1| flagellar hook-associated protein 3 [Escherichia coli B7A]
Length = 317
Score = 60.1 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 6/141 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A ++ S + A
Sbjct: 7 MMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLAR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
+ KV + ++ +S+ + + KI D S+ ++I L+ QL ++A
Sbjct: 67 TFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASI 145
+ NG +
Sbjct: 127 TTDGNGRYIFAGYKTETAPFS 147
Score = 39.7 bits (90), Expect = 0.85, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 71/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIRQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRTGLGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|157155540|ref|YP_001462317.1| flagellar hook-associated protein FlgL [Escherichia coli E24377A]
gi|300922609|ref|ZP_07138709.1| flagellar hook-associated protein 3 [Escherichia coli MS 182-1]
gi|301328547|ref|ZP_07221608.1| flagellar hook-associated protein 3 [Escherichia coli MS 78-1]
gi|157077570|gb|ABV17278.1| flagellar hook-associated protein 3 [Escherichia coli E24377A]
gi|300421086|gb|EFK04397.1| flagellar hook-associated protein 3 [Escherichia coli MS 182-1]
gi|300844939|gb|EFK72699.1| flagellar hook-associated protein 3 [Escherichia coli MS 78-1]
Length = 317
Score = 60.1 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 6/141 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A ++ S + A
Sbjct: 7 MMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLAR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
+ KV + ++ +S+ + + KI D S+ ++I L+ QL ++A
Sbjct: 67 TFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASI 145
+ NG +
Sbjct: 127 TTDGNGRYIFAGYKTETAPFS 147
Score = 41.3 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 71/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIRQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAGLGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|315932630|gb|EFV11561.1| flagellar hook-associated protein FlgL [Campylobacter jejuni subsp.
jejuni 327]
Length = 749
Score = 60.1 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/217 (10%), Positives = 70/217 (32%), Gaps = 3/217 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + ++ L + +++SGL++ ++ ++A+ + ++ + L V
Sbjct: 3 ITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQV 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
++ + + + ++ K K+T T ++I E+ +++ +
Sbjct: 63 KESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A S + + + + + G + T Y + + +
Sbjct: 123 QLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINVVTGAGTESPYNIPGWDLFFKAD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI 217
D ++ + + D + S
Sbjct: 183 GDYKKQISTNVSFTDNRWDLNKDPDKTKYLTGDSKWQ 219
Score = 49.0 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 34/374 (9%), Positives = 89/374 (23%), Gaps = 11/374 (2%)
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSST 142
+ TI K T ++ + + G++ G ++
Sbjct: 378 TINNQQFTIDLKQTDFIKSKMTDTDGNATNGADYDNVYFEKNGNTVYGNVSQVIKGSNAY 437
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A+ + + D + + + + + N + +
Sbjct: 438 ATDSTKLSEVMAGDSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSYPDPNNPGQTISFPI 497
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ T S + AA+ Q+ V
Sbjct: 498 THTDPATGNSGVVTGSNDITYGQINDIIGMFAADKIPTQSITATNGKVDANGYNNLQQLM 557
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ + S+ S + + + + +
Sbjct: 558 KDSQATVDVSMDYKGRISVTDKLSSGTNIEISLSDSQSGHFPQPPFSTTSSVTNGPNFSF 617
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE------KLAMEEMVSFIDTQIKCAT 376
+ +S +D + ++ + M+ + +D +
Sbjct: 618 SANNSLVIDEPNVDIIKDLDSMIDAVLKGNMRADSESEDPRNTGMQGALERLDHLADHIS 677
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
+G+ + I + V+ ++D D L +Q Q +++A
Sbjct: 678 KLNTTMGAYHNTIEDVNTRSTFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKA- 736
Query: 437 SIVNNSTARILSLF 450
++T LSL
Sbjct: 737 ----STTISQLSLL 746
>gi|153951331|ref|YP_001398131.1| flagellar hook-associated protein FlgL [Campylobacter jejuni subsp.
doylei 269.97]
gi|152938777|gb|ABS43518.1| flagellin family protein [Campylobacter jejuni subsp. doylei
269.97]
Length = 750
Score = 60.1 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/372 (6%), Positives = 99/372 (26%), Gaps = 5/372 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + ++ L + +++SGL++ ++ ++A+ + ++ + L V
Sbjct: 3 ITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQV 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
++ + + + ++ K K+T T ++I E+ +++ +
Sbjct: 63 KESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD--NGKVQITTIDYYLDPETVLLD 178
+A S + + + + + G + G + + D
Sbjct: 123 QLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINVVTGARTESPYNIPGWDLFFKAD 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ +++ + K ++ + + +
Sbjct: 183 GDYKKQISTNVSFTDNRWDLNKDPDKTKYLTGDSKWKQLIGQGYVKDNGLDPDKDFEYDD 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
T+ V ++ + + + +
Sbjct: 243 SKLDFPPTTLYVQGTKPDGTSFKSAVLVKPDDTLEDVMENIGALYGNTPNNKVVEVSMND 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
S ++ + D + + D+ + +++ N
Sbjct: 303 SGQIQITDLKQGNNKLDFHAVAFTPQFDDKAEYQNIKDAMAANPPMSMDNLTNAVMTAAT 362
Query: 359 LAMEEMVSFIDT 370
++ ++
Sbjct: 363 QQNNGDITKLNN 374
Score = 46.7 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 32/374 (8%), Positives = 87/374 (23%), Gaps = 11/374 (2%)
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSST 142
+ TI K T ++ + + G++ G ++
Sbjct: 379 TINNQQFTIDLKQTDFIKSNMTDSDGKPANGADYDNVYFEKNGNTVYGNVSQVIKGSNAY 438
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A+ + + D + + + + + +N + +
Sbjct: 439 ATDSTKLSEVMAGDSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSFKDPKNPNQTISFPI 498
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ T S + AA+ +
Sbjct: 499 THTDPATGNSGVVTGSNDITYKQLNDIIGMFAADRIPTTTIQANNGQINNADYTQIQQLM 558
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ + S+ S + + +
Sbjct: 559 KDSQATVDVSMDYKGRISVTDKLSSGTNIGISLSDSQSGQFPQPPYTTTAQVQNGPNFSF 618
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK------LAMEEMVSFIDTQIKCAT 376
+ +S +D + ++ + M+ + +D +
Sbjct: 619 SANNSLVIDEPNVDIIKDLDSMIDAVLKGNMRADGNSADPRNTGMQGALERLDHLADHVS 678
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
+G+ + I + + V+ ++D D L +Q Q +++A
Sbjct: 679 KLNTTMGAYHNTIDGVNTRVNFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKA- 737
Query: 437 SIVNNSTARILSLF 450
++T LSL
Sbjct: 738 ----STTISQLSLL 747
>gi|307087694|gb|ADN26824.1| flagellin [uncultured Borrelia sp.]
gi|307087698|gb|ADN26826.1| flagellin [uncultured Borrelia sp.]
Length = 228
Score = 60.1 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 3/97 (3%)
Query: 54 KSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQS 110
S LS S + + + +++ V+ +K D SIQ
Sbjct: 1 NSQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQI 60
Query: 111 EITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
EI QL ++ IA + +N + L + A+
Sbjct: 61 EIEQLTDEINRIADQAQYNQMHMLSNKSAAQNVKTAE 97
>gi|256018660|ref|ZP_05432525.1| flagellar hook-associated protein FlgL [Shigella sp. D9]
gi|260854566|ref|YP_003228457.1| flagellar hook-filament junction protein FlgL [Escherichia coli
O26:H11 str. 11368]
gi|260867446|ref|YP_003233848.1| flagellar hook-filament junction protein FlgL [Escherichia coli
O111:H- str. 11128]
gi|293433373|ref|ZP_06661801.1| flagellar hook-associated protein 3 [Escherichia coli B088]
gi|300816785|ref|ZP_07097005.1| flagellar hook-associated protein 3 [Escherichia coli MS 107-1]
gi|332279729|ref|ZP_08392142.1| flagellar hook-associated protein FlgL [Shigella sp. D9]
gi|257753215|dbj|BAI24717.1| flagellar hook-filament junction protein FlgL [Escherichia coli
O26:H11 str. 11368]
gi|257763802|dbj|BAI35297.1| flagellar hook-filament junction protein FlgL [Escherichia coli
O111:H- str. 11128]
gi|291324192|gb|EFE63614.1| flagellar hook-associated protein 3 [Escherichia coli B088]
gi|300530559|gb|EFK51621.1| flagellar hook-associated protein 3 [Escherichia coli MS 107-1]
gi|323156890|gb|EFZ43024.1| flagellar hook-associated protein 3 [Escherichia coli EPECa14]
gi|323175238|gb|EFZ60851.1| flagellar hook-associated protein 3 [Escherichia coli LT-68]
gi|323175685|gb|EFZ61279.1| flagellar hook-associated protein 3 [Escherichia coli 1180]
gi|323185794|gb|EFZ71155.1| flagellar hook-associated protein 3 [Escherichia coli 1357]
gi|324117346|gb|EGC11253.1| flagellar hook protein 3 [Escherichia coli E1167]
gi|332102081|gb|EGJ05427.1| flagellar hook-associated protein FlgL [Shigella sp. D9]
Length = 317
Score = 60.1 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 6/141 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A ++ S + A
Sbjct: 7 MMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLAR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
+ KV + ++ +S+ + + KI D S+ ++I L+ QL ++A
Sbjct: 67 TFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASI 145
+ NG +
Sbjct: 127 TTDGNGRYIFAGYKTETAPFS 147
Score = 42.0 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 72/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIRQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|157415144|ref|YP_001482400.1| flagellar hook-associated protein FlgL [Campylobacter jejuni subsp.
jejuni 81116]
gi|157386108|gb|ABV52423.1| putative flagellin [Campylobacter jejuni subsp. jejuni 81116]
gi|307747787|gb|ADN91057.1| Flagellin family protein [Campylobacter jejuni subsp. jejuni M1]
Length = 749
Score = 60.1 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/217 (10%), Positives = 70/217 (32%), Gaps = 3/217 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + ++ L + +++SGL++ ++ ++A+ + ++ + L V
Sbjct: 3 ITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQV 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
++ + + + ++ K K+T T ++I E+ +++ +
Sbjct: 63 KESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A S + + + + + G + T Y + + +
Sbjct: 123 QLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINVVTGAGTESPYNIPGWDLFFKAD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI 217
D ++ + + D + S
Sbjct: 183 GDYKKQISTNVSFTDNRWDLNKDPDKTKYLTGDSKWQ 219
Score = 49.0 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 34/374 (9%), Positives = 89/374 (23%), Gaps = 11/374 (2%)
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSST 142
+ TI K T ++ + + G++ G ++
Sbjct: 378 TINNQQFTIDLKQTDFIKSKMTDTDGNATNGADYDNVYFEKNGNTVYGNVSQVIKGSNAY 437
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A+ + + D + + + + + N + +
Sbjct: 438 ATDSTKLSEVMAGDSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSYPDPNNPGQTISFPI 497
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ T S + AA+ Q+ V
Sbjct: 498 THTDPATGNSGVVTGSNDITYGQINDIIGMFAADKIPTQSITATNGKVDANGYNNLQQLM 557
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ + S+ S + + + + +
Sbjct: 558 KDSQATVDVSMDYKGRISVTDKLSSGTNIEISLSDSQSGHFPQPPFSTTSSVTNGPNFSF 617
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE------KLAMEEMVSFIDTQIKCAT 376
+ +S +D + ++ + M+ + +D +
Sbjct: 618 SANNSLVIDEPNVDIIKDLDSMIDAVLKGNMRADSESEDPRNTGMQGALERLDHLADHIS 677
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
+G+ + I + V+ ++D D L +Q Q +++A
Sbjct: 678 KLNTTMGAYHNTIEDVNTRSTFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKA- 736
Query: 437 SIVNNSTARILSLF 450
++T LSL
Sbjct: 737 ----STTISQLSLL 746
>gi|254261806|ref|ZP_04952860.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei
1710a]
gi|254220495|gb|EET09879.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei
1710a]
Length = 410
Score = 60.1 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 42/394 (10%), Positives = 98/394 (24%), Gaps = 8/394 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + D + + +VSSG+ ++ ADN + A + + + L+
Sbjct: 3 ISSTQLYSLNVDMMNDQQAQIAQLYQQVSSGISLTTPADNPLAAAQAVQLSATSATLAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMS---TIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + + + ++ DV++ G +D ++ ++I + L
Sbjct: 63 TQNQTIVQTALQTEDTTLTSVNDVLNAAYQALMHAGDGGLSDSDRAALAAQIQGSRDHLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G ++ K G D G + D + +
Sbjct: 123 TLANTADGAGNYLFAGFQPTTQPFSNKPGGGVTYAGDYGARAVQIADTRTVSQGDNGANV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G L VS+ + S +T +F + A T +
Sbjct: 183 FMSVPFLGSLPVPAAGASNTGTGTIGAVSITNPSDPTNTHQFTITFGGTAAAPTYTVTDN 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
T ++ N T + T +++ +
Sbjct: 243 SVTPPTTTAAQAYSSGQGINLGGQTVAVSGKPAVGDTFTVTPAPQAGTDVFATLDTVIAA 302
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
++T L + + L
Sbjct: 303 LKSPVGNSQTASTALTNTMATASTKLMNTMTNVLTVQASVGGRLQEVKAMHAVTTTNTLQ 362
Query: 361 MEEMVSFID-----TQIKCATAAAGKIGSISSRI 389
+S + I + + +
Sbjct: 363 TTNSLSNLTDTNLPAAISQFLQLQNSLSAAQNAF 396
>gi|315281369|ref|ZP_07870007.1| flagellar hook-associated protein 3 [Listeria marthii FSL S4-120]
gi|313614986|gb|EFR88492.1| flagellar hook-associated protein 3 [Listeria marthii FSL S4-120]
Length = 291
Score = 60.1 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 54/168 (32%), Gaps = 3/168 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A S +L +++ NL Q +VSSG + ++N + L+
Sbjct: 3 ISTNQQANSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQLNRE 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLR 120
+ S ++ A+ +S M+ + + + +D ++ EI L L
Sbjct: 63 KTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTSDKNNMSQSAEEIKGLLDVLV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
+A + + + K+ D
Sbjct: 123 SVANAEDDGRYVFSGSSTSVKPFTTDKTTGEIIYNGTTENKNFRVTDT 170
>gi|213585979|ref|ZP_03367805.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 276
Score = 60.1 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/193 (12%), Positives = 55/193 (28%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + +++S+G RV++ +D+ S A ++ S
Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLFQAQAQNSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ A + KV + ++ +S+ + T + KI S T LQ +
Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N G T + V +
Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQQVDSARTMVIGHTGAQIFNS 182
Query: 184 TERYGLLDRNHKI 196
+ + +
Sbjct: 183 ITSNAVPEPDGSD 195
>gi|94995571|gb|ABF50697.1| flagellin [Borrelia lonestari]
Length = 156
Score = 60.1 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 32/92 (34%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
++ + ++ I+ I+ T +G+ +R+ + + ++
Sbjct: 65 QGGISSPINVTTAIDANASLTKIEDAIRMVTDQRANLGAFQNRLESVKASTDYAIENLKA 124
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALS 437
++ DA M E + Q A+ ++
Sbjct: 125 SYAQIKDAIMTDEIVASTTNSILTQSAMAMIA 156
>gi|253996312|ref|YP_003048376.1| flagellar hook-associated protein FlgL [Methylotenera mobilis JLW8]
gi|253982991|gb|ACT47849.1| flagellar hook-associated protein 3 [Methylotenera mobilis JLW8]
Length = 303
Score = 60.1 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/211 (11%), Positives = 71/211 (33%), Gaps = 3/211 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S K+ ++ + ++++G R++ +D+ + A + A S
Sbjct: 3 ISTNTIYQSGISKITNLQSEQTKLMQQIATGQRIASPSDDPVGAARAAELAQAKSANSKF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+D K++ ++ ++ ++M++I++ + + + +++ L
Sbjct: 63 ADTRQTAQLKLNTLESNLTSVTNLMTSIQSSLVSAGNATYSDLERGFVAADLKTALEGLI 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A +G + +A + +++ D N + + D
Sbjct: 123 GLANTKDASGNYLYSGFQTDTAPFVANATGAAYVGDTNNQSLQVDTSRQMVVNATGDDVF 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
G +N + + +
Sbjct: 183 QAGGNDVFATIQNLVTLLNTPLTPANQAAFT 213
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 31/283 (10%), Positives = 74/283 (26%)
Query: 151 GSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSV 210
+ + K+ + + + + + +
Sbjct: 6 NTIYQSGISKITNLQSEQTKLMQQIATGQRIASPSDDPVGAARAAELAQAKSANSKFADT 65
Query: 211 YDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKS 270
+ T+ + + ++ A + A T +
Sbjct: 66 RQTAQLKLNTLESNLTSVTNLMTSIQSSLVSAGNATYSDLERGFVAADLKTALEGLIGLA 125
Query: 271 PSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKD 330
+ AS Y+ G + + G TN+ +V + V + +
Sbjct: 126 NTKDASGNYLYSGFQTDTAPFVANATGAAYVGDTNNQSLQVDTSRQMVVNATGDDVFQAG 185
Query: 331 LPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIH 390
+ ++VTL T + + +S + + IGS + +
Sbjct: 186 GNDVFATIQNLVTLLNTPLTPANQAAFTAGVASGLSSMRQGLDNVLTVRASIGSRLNELD 245
Query: 391 LQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ + K + + D D A+ + LS QT + A
Sbjct: 246 QLDISGSDLDLQYSKSLSDIQDLDYAAALSDLSKNQTIMEAAQ 288
>gi|16129046|ref|NP_415601.1| flagellar hook-filament junction protein [Escherichia coli str.
K-12 substr. MG1655]
gi|89107929|ref|AP_001709.1| flagellar hook-filament junction protein [Escherichia coli str.
K-12 substr. W3110]
gi|170080734|ref|YP_001730054.1| flagellar hook-filament junction protein [Escherichia coli str.
K-12 substr. DH10B]
gi|238900337|ref|YP_002926133.1| flagellar hook-filament junction protein [Escherichia coli BW2952]
gi|256023219|ref|ZP_05437084.1| flagellar hook-associated protein FlgL [Escherichia sp. 4_1_40B]
gi|300950180|ref|ZP_07164124.1| flagellar hook-associated protein 3 [Escherichia coli MS 116-1]
gi|300954377|ref|ZP_07166831.1| flagellar hook-associated protein 3 [Escherichia coli MS 175-1]
gi|301029702|ref|ZP_07192756.1| flagellar hook-associated protein 3 [Escherichia coli MS 196-1]
gi|301644497|ref|ZP_07244492.1| flagellar hook-associated protein 3 [Escherichia coli MS 146-1]
gi|307137718|ref|ZP_07497074.1| flagellar hook-associated protein FlgL [Escherichia coli H736]
gi|331641627|ref|ZP_08342762.1| flagellar hook-associated protein 3 [Escherichia coli H736]
gi|416996|sp|P29744|FLGL_ECOLI RecName: Full=Flagellar hook-associated protein 3; Short=HAP3;
AltName: Full=Hook-filament junction protein
gi|407679|gb|AAA18322.1| hook-associated protein 3 [Escherichia coli]
gi|1651529|dbj|BAA35892.1| flagellar hook-filament junction protein [Escherichia coli str. K12
substr. W3110]
gi|1787324|gb|AAC74167.1| flagellar hook-filament junction protein [Escherichia coli str.
K-12 substr. MG1655]
gi|169888569|gb|ACB02276.1| flagellar hook-filament junction protein [Escherichia coli str.
K-12 substr. DH10B]
gi|238861109|gb|ACR63107.1| flagellar hook-filament junction protein [Escherichia coli BW2952]
gi|260449777|gb|ACX40199.1| flagellar hook-associated protein 3 [Escherichia coli DH1]
gi|299877390|gb|EFI85601.1| flagellar hook-associated protein 3 [Escherichia coli MS 196-1]
gi|300318613|gb|EFJ68397.1| flagellar hook-associated protein 3 [Escherichia coli MS 175-1]
gi|300450465|gb|EFK14085.1| flagellar hook-associated protein 3 [Escherichia coli MS 116-1]
gi|301077161|gb|EFK91967.1| flagellar hook-associated protein 3 [Escherichia coli MS 146-1]
gi|309701355|emb|CBJ00656.1| flagellar hook-associated protein 3 [Escherichia coli ETEC H10407]
gi|315135715|dbj|BAJ42874.1| flagellar hook-associated protein FlgL [Escherichia coli DH1]
gi|315618253|gb|EFU98843.1| flagellar hook-associated protein 3 [Escherichia coli 3431]
gi|323937823|gb|EGB34087.1| flagellar hook-associated protein 3 [Escherichia coli E1520]
gi|323942552|gb|EGB38719.1| flagellar hook protein 3 [Escherichia coli E482]
gi|331038425|gb|EGI10645.1| flagellar hook-associated protein 3 [Escherichia coli H736]
Length = 317
Score = 60.1 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 6/141 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A ++ S + A
Sbjct: 7 MMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLAR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
+ KV + ++ +S+ + + KI D S+ ++I L+ QL ++A
Sbjct: 67 TFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASI 145
+ NG +
Sbjct: 127 TTDGNGRYIFAGYKTETAPFS 147
Score = 42.8 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 72/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|293408374|ref|ZP_06652213.1| flagellar hook-associated protein 3 [Escherichia coli B354]
gi|291471552|gb|EFF14035.1| flagellar hook-associated protein 3 [Escherichia coli B354]
Length = 309
Score = 60.1 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 65/187 (34%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q +++ +L V +++++G ++ +D+ + + A+
Sbjct: 3 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIQSLTESMV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTN 182
Query: 181 TDGTERY 187
++ +
Sbjct: 183 VAASDFF 189
Score = 39.0 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 43/134 (32%)
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + + VDT D +++ S+ + +
Sbjct: 159 SYSYQGNSDHRQTTVSNGVEVDTNVAASDFFGSNLDVLNTLNSLSQELQDPNVDPADPQV 218
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ V +DT A+ +G + + + D + + ++ +G L D D
Sbjct: 219 QSDIQNAVDVVDTASDNLNASIASLGETQNTMSMLSDAQTDISTSNDELIGSLQDLDYGP 278
Query: 418 ESTRLSALQTQQQL 431
S + L+ +
Sbjct: 279 ASITFTGLEVAMEA 292
>gi|71906398|ref|YP_283985.1| flagellar hook-associated protein FlgL [Dechloromonas aromatica
RCB]
gi|71846019|gb|AAZ45515.1| Flagellin, N-terminal [Dechloromonas aromatica RCB]
Length = 326
Score = 60.1 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 17/141 (12%), Positives = 49/141 (34%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T ++ + +L +Q+++ +G ++ D+ + A ++ N +
Sbjct: 5 ISTQQLYNGGVSGIQRLQSSLYTLQNQIDTGRKIVTPKDDPVGSAQALVVSQANSVNALY 64
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
++K++ + + D + I K A + T+L +L ++
Sbjct: 65 LKNQASATTKLNGLDSILGGVNDQLQNIYEKAVAAGNGSYSDTDRAAVATELSERLNNLI 124
Query: 124 RGSSFNGENWLRTDLGSSTAS 144
++ G + +
Sbjct: 125 GLANSQDGTGRYVFAGFQSTT 145
Score = 46.7 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 28/309 (9%), Positives = 67/309 (21%)
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
+ + G + + + I V V+ +++
Sbjct: 7 TQQLYNGGVSGIQRLQSSLYTLQNQIDTGRKIVTPKDDPVGSAQALVVSQANSVNALYLK 66
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
+ + + + A ++ + +
Sbjct: 67 NQASATTKLNGLDSILGGVNDQLQNIYEKAVAAGNGSYSDTDRAAVATELSERLNNLIGL 126
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
++ A A+ + N D T
Sbjct: 127 ANSQDGTGRYVFAGFQSTTQPFSLSANPASTTNPSAYSLSPANAYINYNGDDGAQTLQVS 186
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
A ++ S + V + A + I
Sbjct: 187 ASESVQTNLPGSDVFMRIRDSSGNATGRSVFDAVQNMVEFLKTPGASASSSRYTTALGDI 246
Query: 369 DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQ 428
I + +G+ +S + + + E+ + L D D AS T +S + Q
Sbjct: 247 SASIATVSKGLSTVGARASSLESMTNTAGDRKLQYEEQLSNLQDLDYASALTAVSQQKLQ 306
Query: 429 QQLAVQALS 437
+ A +
Sbjct: 307 LEAAQSTFA 315
>gi|309798077|ref|ZP_07692452.1| flagellar hook-associated protein 3 [Escherichia coli MS 145-7]
gi|308118360|gb|EFO55622.1| flagellar hook-associated protein 3 [Escherichia coli MS 145-7]
Length = 249
Score = 60.1 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 6/144 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A ++ S + A
Sbjct: 7 MMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLAR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
+ KV + ++ +S+ + + KI D S+ ++I L+ QL ++A
Sbjct: 67 TFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASIAKS 148
+ NG + +
Sbjct: 127 TTDGNGRYIFAGYKTETAPFSEAN 150
>gi|94969958|ref|YP_592006.1| flagellin-like [Candidatus Koribacter versatilis Ellin345]
gi|94552008|gb|ABF41932.1| flagellin-like protein [Candidatus Koribacter versatilis Ellin345]
Length = 295
Score = 60.1 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 57/175 (32%), Gaps = 4/175 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N + + L + VS+G R+S +D+ + ++ ++
Sbjct: 3 VNPNQWS-NILDTLNRLTEGENNAIREVSTGNRLSAPSDDPSAMTLLIRNRASQSDCDRY 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
IG S+ + A + +S ++ G + +I E++Q++ Q+
Sbjct: 62 VQNIGSISASLQNADSALSNVTTSLNRAITLGLEGTGGTLSNANRSAIADEVSQIRDQVL 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
+A + + ++ + + + + V+ I
Sbjct: 122 ALANTTFNGSYAFGGASTKTTPFVLDSTSVSGVRYQGDSTVEQVPIGDGSMVAAN 176
Score = 42.0 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 26/68 (38%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
++ + + + ++ GS SR+ +F + ++ L DMA
Sbjct: 206 GIDTATTTLRSAFDQFSSERVSYGSTISRLQADSNFQSSSKVQLQTEENSLTGVDMAQAI 265
Query: 420 TRLSALQT 427
+ L+ +T
Sbjct: 266 SELTQAET 273
>gi|157160610|ref|YP_001457928.1| flagellar hook-associated protein FlgL [Escherichia coli HS]
gi|193064538|ref|ZP_03045618.1| flagellar hook-associated protein 3 [Escherichia coli E22]
gi|194428487|ref|ZP_03061027.1| flagellar hook-associated protein 3 [Escherichia coli B171]
gi|209918337|ref|YP_002292421.1| flagellar hook-associated protein FlgL [Escherichia coli SE11]
gi|260843323|ref|YP_003221101.1| flagellar hook-filament junction protein FlgL [Escherichia coli
O103:H2 str. 12009]
gi|300821136|ref|ZP_07101285.1| flagellar hook-associated protein 3 [Escherichia coli MS 119-7]
gi|300918687|ref|ZP_07135267.1| flagellar hook-associated protein 3 [Escherichia coli MS 115-1]
gi|312971220|ref|ZP_07785398.1| flagellar hook-associated protein 3 [Escherichia coli 1827-70]
gi|331667484|ref|ZP_08368348.1| flagellar hook-associated protein 3 [Escherichia coli TA271]
gi|331676874|ref|ZP_08377570.1| flagellar hook-associated protein 3 [Escherichia coli H591]
gi|157066290|gb|ABV05545.1| flagellar hook-associated protein 3 [Escherichia coli HS]
gi|192927790|gb|EDV82404.1| flagellar hook-associated protein 3 [Escherichia coli E22]
gi|194413539|gb|EDX29821.1| flagellar hook-associated protein 3 [Escherichia coli B171]
gi|209911596|dbj|BAG76670.1| flagellar hook-filament junction protein 3 FlgL [Escherichia coli
SE11]
gi|257758470|dbj|BAI29967.1| flagellar hook-filament junction protein FlgL [Escherichia coli
O103:H2 str. 12009]
gi|300414161|gb|EFJ97471.1| flagellar hook-associated protein 3 [Escherichia coli MS 115-1]
gi|300526435|gb|EFK47504.1| flagellar hook-associated protein 3 [Escherichia coli MS 119-7]
gi|310336422|gb|EFQ01608.1| flagellar hook-associated protein 3 [Escherichia coli 1827-70]
gi|323163693|gb|EFZ49514.1| flagellar hook-associated protein 3 [Escherichia coli E128010]
gi|324017413|gb|EGB86632.1| flagellar hook-associated protein 3 [Escherichia coli MS 117-3]
gi|331065069|gb|EGI36964.1| flagellar hook-associated protein 3 [Escherichia coli TA271]
gi|331075563|gb|EGI46861.1| flagellar hook-associated protein 3 [Escherichia coli H591]
Length = 317
Score = 60.1 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 6/141 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A ++ S + A
Sbjct: 7 MMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLAR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
+ KV + ++ +S+ + + KI D S+ ++I L+ QL ++A
Sbjct: 67 TFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASI 145
+ NG +
Sbjct: 127 TTDGNGRYIFAGYKTETAPFS 147
Score = 42.8 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 72/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|206603516|gb|EDZ39996.1| Flagellar hook-associated protein (FlgL) [Leptospirillum sp. Group
II '5-way CG']
Length = 312
Score = 59.8 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/189 (10%), Positives = 54/189 (28%), Gaps = 3/189 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
NL V ++SSG + D + + + + + G++++ + ++ +
Sbjct: 22 DNLYDVDRQISSGKQFETPGDAPGRMGESLRINRNLSVTRRIIENAREGANRLKLMESIL 81
Query: 82 SKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ ++ K D + E+ + Q+ +A + + T++
Sbjct: 82 DQVGTLLIRAKGLAIRMANDTMTAEDRRVGAQELKRTLEQVVSLANTKAGEQYLFSGTNV 141
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ G + T+ P +L +
Sbjct: 142 TRPPFHFTDPKLNPGSVAYLGNHRSETVQQGFSPRQREAGLMPVTEAGDRILGNSAADPF 201
Query: 199 EPQVLKDID 207
+ L +
Sbjct: 202 GNKPLPVMR 210
Score = 44.0 bits (101), Expect = 0.046, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 28/71 (39%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
N++ + + +D I T A +G+ I D ++ + + + D D+
Sbjct: 219 NDQPQITRSIDELDRTIHSVTERAAVLGTRERAIRTTVDRLEKYTISQKTLKSQNEDVDV 278
Query: 416 ASESTRLSALQ 426
++L+ Q
Sbjct: 279 PKAVSKLALNQ 289
>gi|331657145|ref|ZP_08358107.1| flagellar hook-associated protein 3 [Escherichia coli TA206]
gi|331055393|gb|EGI27402.1| flagellar hook-associated protein 3 [Escherichia coli TA206]
Length = 317
Score = 59.8 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 55/143 (38%), Gaps = 6/143 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A ++ S + A
Sbjct: 7 MMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLAR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
+ KV + ++ +S+ + + KI D S+ ++I L+ QL ++A
Sbjct: 67 TFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASIAK 147
+ NG S
Sbjct: 127 TTDGNGRYIFAGYKTESAPFSEA 149
Score = 40.9 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 21/300 (7%), Positives = 66/300 (22%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G ++ G + + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTESAPFSEADGKYEGGADSIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + LVD D + + QT Q +
Sbjct: 241 NNVLTVRAELGTQLNELESLGSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQAS 300
>gi|145845973|gb|ABP96976.1| flagellin [Cronobacter sakazakii]
gi|145845975|gb|ABP96977.1| flagellin [Cronobacter sakazakii]
gi|145845977|gb|ABP96978.1| flagellin [Cronobacter sakazakii]
Length = 189
Score = 59.8 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 3/166 (1%)
Query: 51 QIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KS 107
M S ++ + G S V A+ +++ + I+ S S
Sbjct: 1 NRMTSQVKGMTQAARNANDGISLVQTAEGNLNEINTNLQRIRELAVQAANDTNGSTDLTS 60
Query: 108 IQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTID 167
I +EITQ S++ IA G++FNG+ L + ++ + S +
Sbjct: 61 INTEITQRLSEIDRIAGGANFNGKKLLDGSVSTALKIQVGAGTSSNDTISIDSNALINAT 120
Query: 168 YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ + + + + + + I ++
Sbjct: 121 SGTLDSALSTSIADNSSAQAVISAADAAIAKIDTARSNMGAIQNRF 166
>gi|315616820|gb|EFU97437.1| flagellar hook-associated protein 3 [Escherichia coli 3431]
Length = 309
Score = 59.8 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/187 (11%), Positives = 65/187 (34%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q D++ +L V +++++G ++ +D+ + + A+
Sbjct: 3 VTTQQTYVSMTQSFNDLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTN 182
Query: 181 TDGTERY 187
++ +
Sbjct: 183 VAASDFF 189
Score = 39.0 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 43/134 (32%)
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + + VDT D +++ S+ + +
Sbjct: 159 SYSYQGNSDHRQTTVSNGVEVDTNVAASDFFGSNLDVLNTLNSLSQELQAPNVDPADPQV 218
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ V +DT A+ +G + + + D + + ++ +G L D D
Sbjct: 219 QSDIQNAVDVVDTASDDLNASIASLGETQNTMSMLSDAQTDISTSNDELIGSLQDLDYGP 278
Query: 418 ESTRLSALQTQQQL 431
S + L+ +
Sbjct: 279 ASITFTGLEVAMEA 292
>gi|331645425|ref|ZP_08346529.1| flagellar hook-associated protein 3 [Escherichia coli M605]
gi|331045587|gb|EGI17713.1| flagellar hook-associated protein 3 [Escherichia coli M605]
Length = 317
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 64/187 (34%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q +++ +L V +++++G + +D+ + + A+
Sbjct: 11 VTTQQTYVSMTQSFNNLSGSLAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 70
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 71 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTDSMV 130
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 131 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTN 190
Query: 181 TDGTERY 187
++ +
Sbjct: 191 VAASDFF 197
Score = 39.0 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 42/134 (31%)
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + + VDT D +++ S+ +
Sbjct: 167 SYSYQGNSDHRQTTVSNGVEVDTNVAASDFFGSNLDVLNTLNSLSQELQNPDVDPADPQV 226
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ V +DT A+ +G + + + D + + ++ +G L D D
Sbjct: 227 QSDIQNAVDVVDTASDDLNASIASLGETQNTMSMLSDAQTDISTSNDELIGSLQDLDYGP 286
Query: 418 ESTRLSALQTQQQL 431
S + L+ +
Sbjct: 287 ASITFTGLEVAMEA 300
>gi|323191379|gb|EFZ76641.1| flagellar hook-associated protein 3 [Escherichia coli RN587/1]
Length = 309
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 64/187 (34%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q +++ +L V +++++G + +D+ + + A+
Sbjct: 3 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIQSLTESMV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTN 182
Query: 181 TDGTERY 187
++ +
Sbjct: 183 VAASDFF 189
Score = 38.2 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 43/134 (32%)
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + + VDT D +++ S+ +
Sbjct: 159 SYSYQGNSDHRQTTVSNGVEVDTNVAASDFFGSNLDVLNTLNSLSQELQNPGVDPADPQV 218
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ V+ +DT A+ +G + + + D + + ++ +G L D D
Sbjct: 219 QSDIQNAVNVVDTASDDLNASIASLGETQNTMSMLSDAQTDISTSNDELIGSLQDLDYGP 278
Query: 418 ESTRLSALQTQQQL 431
S + L+ +
Sbjct: 279 ASITFTGLEVAMEA 292
>gi|251772403|gb|EES52970.1| probable flagellar hook-associated protein, FlgL [Leptospirillum
ferrodiazotrophum]
Length = 313
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 19/160 (11%), Positives = 46/160 (28%), Gaps = 3/160 (1%)
Query: 19 DINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAK 78
NL + +VSSGLR D S + + G++++ + +
Sbjct: 19 RATENLYESEKQVSSGLRADTPGDAPEAMSEVLRVNRSLAVTGQIIQNAREGATRIALME 78
Query: 79 AGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+ +++ ++M K D + E +L Q +A +
Sbjct: 79 SILTQIDNIMIRAKGLAIRQANGTMDSQDRRIAAEEAERLLEQTVALANTRGGEQYLFGG 138
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
T++ ++ ++ +
Sbjct: 139 TNISVPPFLLSDPQKEEPFIVSYQGNHKSSTIQQGFTPSF 178
Score = 46.3 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 39/92 (42%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
N+ A++ + D ++ + + +G+ + ++ R ++ + D D+
Sbjct: 220 NDDKAIQAAIGEFDLALRKVSERSAVLGTYERALRSTISRLEKYRTDLKVLRSQTEDVDI 279
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
++R++ Q +++ +A + + +L
Sbjct: 280 PRAASRMALSQNLLEVSAKASRNILQNVQNVL 311
>gi|224417770|ref|ZP_03655776.1| flagellin [Helicobacter canadensis MIT 98-5491]
gi|253827113|ref|ZP_04869998.1| flagellin [Helicobacter canadensis MIT 98-5491]
gi|313141311|ref|ZP_07803504.1| flagellin [Helicobacter canadensis MIT 98-5491]
gi|253510519|gb|EES89178.1| flagellin [Helicobacter canadensis MIT 98-5491]
gi|313130342|gb|EFR47959.1| flagellin [Helicobacter canadensis MIT 98-5491]
Length = 250
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 48/142 (33%), Gaps = 5/142 (3%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N A + L + E +++S + A + A +IA + + ++S
Sbjct: 5 NTQANESLINLNKAKEDEEKALKKIASPRPIE--ATDGASLAIANALLAQANSMSQGIRN 62
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIA 123
+ IA +S D + A + I+SE L + D
Sbjct: 63 ANDAIGMMQIADGTLSTLSDSAIRMNELSVAMGNPALNSSQRSMIESEAAALTQSMNDAV 122
Query: 124 RGSSFNGENWLRTDLGSSTASI 145
++FNG+N + T +
Sbjct: 123 SQATFNGKNVFGGQMDFMTGNG 144
Score = 36.6 bits (82), Expect = 7.7, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 28/92 (30%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
N I I+ IG+ + I D ++ G L+D D+
Sbjct: 154 NTANLSVNNQQSILDFIEDLGMKRADIGAAMNGIQSGIDSNMQTVVNLKAAEGNLLDDDL 213
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
A L+ + + A+ A S L
Sbjct: 214 AENYNELNNAKLRANAALYASSFNAQYLQNRL 245
>gi|332758244|gb|EGJ88567.1| flagellar hook-associated protein 3 [Shigella flexneri 4343-70]
Length = 311
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 6/144 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A ++ S + A
Sbjct: 1 MMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLAR 60
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
+ KV + ++ +S+ + + KI D S+ ++I L+ QL ++A
Sbjct: 61 TFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLAN 120
Query: 125 GSSFNGENWLRTDLGSSTASIAKS 148
+ NG + +
Sbjct: 121 TTDGNGRYIFAGYKTETAPFSEAN 144
Score = 42.0 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 27/312 (8%), Positives = 73/312 (23%), Gaps = 5/312 (1%)
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
++ G+ T + + S + + + +
Sbjct: 2 MYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLART 61
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
K + T + + + + ++ A
Sbjct: 62 FATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLANT 121
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+G + G+ + + S T K+ ++
Sbjct: 122 TDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGHTGDKIFDSITSNA 181
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + + + D A+++ + +
Sbjct: 182 VAEPDGSASETNLFAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSLNNVLTVR 241
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
++G+ +++ + + + LVD D + + QQ A+QA
Sbjct: 242 AELGTQLNKLESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTALQASYKA 297
Query: 440 NNSTARILSLFR 451
LSLF+
Sbjct: 298 FTDMQG-LSLFQ 308
>gi|306813296|ref|ZP_07447489.1| flagellar hook-associated protein FlgL [Escherichia coli NC101]
gi|305854059|gb|EFM54498.1| flagellar hook-associated protein FlgL [Escherichia coli NC101]
Length = 309
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 64/187 (34%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q +++ +L V +++++G + +D+ + + A+
Sbjct: 3 VTTQQTYVSMTQSFNNLSGSLAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTN 182
Query: 181 TDGTERY 187
++ +
Sbjct: 183 VAASDFF 189
Score = 39.0 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 42/134 (31%)
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + + VDT D +++ S+ +
Sbjct: 159 SYSYQGNSDHRQTTVSNGVEVDTNVAASDFFGSNLDVLNTLNSLSQELQNPDVDPADPQV 218
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ V +DT A+ +G + + + D + + ++ +G L D D
Sbjct: 219 QSDIQNAVDVVDTASDDLNASIASLGETQNTMSMLSDAQTDISTSNDELIGSLQDLDYGP 278
Query: 418 ESTRLSALQTQQQL 431
S + L+ +
Sbjct: 279 ASITFTGLEVAMEA 292
>gi|218678701|ref|ZP_03526598.1| flagellin C protein [Rhizobium etli CIAT 894]
Length = 135
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MT +T+ +A++A LR IN Q +VSSG R+ AAD+A+YWS+A +M+SD+ L
Sbjct: 57 MTVKITSAAAVNALAVLRSINKEASQTQQQVSSGYRIETAADDASYWSVATVMRSDSTNL 116
Query: 61 SAVSDAIGLGSSKVDIAKA 79
+ DA+GLG++KVD
Sbjct: 117 GTIGDALGLGAAKVDATYT 135
>gi|218458758|ref|ZP_03498849.1| flagellin domain protein [Rhizobium etli Kim 5]
Length = 73
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 49/72 (68%), Positives = 58/72 (80%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
MTSI TN+SAM+A Q LR IN NLE Q+ VS+G RV A+DNAAYWSIA M+SDN AL
Sbjct: 1 MTSINTNNSAMAALQTLRSINSNLESTQNSVSTGYRVDTASDNAAYWSIATTMRSDNKAL 60
Query: 61 SAVSDAIGLGSS 72
SAVSDA+GLG++
Sbjct: 61 SAVSDALGLGAA 72
>gi|170680479|ref|YP_001744097.1| flagellar hook-associated protein FlgL [Escherichia coli SMS-3-5]
gi|170518197|gb|ACB16375.1| flagellar hook-associated protein 3 [Escherichia coli SMS-3-5]
Length = 317
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 55/141 (39%), Gaps = 6/141 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A ++ S + A
Sbjct: 7 MMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLAR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
+ KV + ++ +S+ + + KI D S+ ++I L+ QL ++A
Sbjct: 67 TFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASI 145
+ NG S
Sbjct: 127 TTDGNGRYIFAGYKTESAPFS 147
Score = 42.8 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 74/319 (23%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G ++ G + + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTESAPFSEVDGKYEGGAESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|94995565|gb|ABF50694.1| flagellin [Borrelia lonestari]
Length = 155
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 10/92 (10%), Positives = 32/92 (34%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
++ + ++ I+ I+ T +G+ +R+ + + ++
Sbjct: 64 QGGISSPINVTTAIDANASLTKIEDAIRMVTDQRANLGAFQNRLESVKASTDYAIENLKA 123
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALS 437
++ DA + E + Q A+ ++
Sbjct: 124 SYAQIKDAIITDEIVASTTNSILTQSAMAMIA 155
>gi|82777305|ref|YP_403654.1| flagellar hook-associated protein FlgL [Shigella dysenteriae Sd197]
gi|309788153|ref|ZP_07682759.1| flagellar hook-associated protein 3 [Shigella dysenteriae 1617]
gi|81241453|gb|ABB62163.1| hook-filament junction protein [Shigella dysenteriae Sd197]
gi|308924005|gb|EFP69506.1| flagellar hook-associated protein 3 [Shigella dysenteriae 1617]
Length = 298
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 6/144 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A ++ S + A
Sbjct: 7 MMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLAR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIAR 124
+ KV + ++ +S+ + + KI D S+ ++I L+ QL ++A
Sbjct: 67 TFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASIAKS 148
+ NG + +
Sbjct: 127 TTDGNGRYIFAGYKTETAPFSEAN 150
>gi|1086468|gb|AAA99140.1| flagellin [Borrelia lonestari]
gi|1086470|gb|AAA99141.1| flagellin [Borrelia lonestari]
Length = 214
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 32/92 (34%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
++ + ++ I+ I+ T +G+ +R+ + + ++
Sbjct: 123 QGGISSPINVTTAIDANASLTKIEDAIRMVTDQRANLGAFQNRLESVKASTDYAIENLKA 182
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALS 437
++ DA M E + Q A+ ++
Sbjct: 183 SYAQIKDAIMTDEIVASTTNSILTQSAMAMIA 214
>gi|59889787|emb|CAH19143.1| Lateral flagellar hook associated protein 3 (FlgL-like)
[Escherichia coli]
gi|284920051|emb|CBG33108.1| lateral flagellar hook associated protein 3 (FlgL-like)
[Escherichia coli 042]
Length = 309
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 64/187 (34%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q +++ +L V +++++G + +D+ + + A+
Sbjct: 3 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 123 VALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTN 182
Query: 181 TDGTERY 187
++ +
Sbjct: 183 VAVSDFF 189
Score = 39.7 bits (90), Expect = 0.88, Method: Composition-based stats.
Identities = 16/134 (11%), Positives = 43/134 (32%)
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + + VDT D +++ ++ + +
Sbjct: 159 SYSYQGNSDHRQTTVSNGVEVDTNVAVSDFFGSNLDVLNTLNTLSQELQDPNVDPADPQV 218
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ V +DT A+ +G + + + D + + ++ +G L D D
Sbjct: 219 QSDIQNAVDVVDTASDNLNASIASLGETQNTMSMLSDAQTDISTSNDELIGSLQDLDYGP 278
Query: 418 ESTRLSALQTQQQL 431
S + L+ +
Sbjct: 279 ASITFTGLEVAMEA 292
>gi|331671811|ref|ZP_08372607.1| flagellar hook-associated protein 3 [Escherichia coli TA280]
gi|331070800|gb|EGI42159.1| flagellar hook-associated protein 3 [Escherichia coli TA280]
Length = 317
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 64/187 (34%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q +++ +L V +++++G + +D+ + + A+
Sbjct: 11 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 70
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 71 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 130
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 131 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTN 190
Query: 181 TDGTERY 187
++ +
Sbjct: 191 VAASDFF 197
Score = 39.3 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 43/134 (32%)
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + + VDT D +++ S+ + +
Sbjct: 167 SYSYQGNSDHRQTTVSNGVEVDTNVAASDFFGSNLDVLNTLNSLSQELQDPNVDPADPQV 226
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ V +DT A+ +G + + + D + + ++ +G L D D
Sbjct: 227 QSDIQNAVDVVDTASDNLNASIASLGETQNTMSMLSDAQTDISTSNDELIGSLQDLDYGP 286
Query: 418 ESTRLSALQTQQQL 431
S + L+ +
Sbjct: 287 ASITFTGLEVAMEA 300
>gi|283954448|ref|ZP_06371968.1| putative flagellin [Campylobacter jejuni subsp. jejuni 414]
gi|283794065|gb|EFC32814.1| putative flagellin [Campylobacter jejuni subsp. jejuni 414]
Length = 750
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/416 (7%), Positives = 103/416 (24%), Gaps = 20/416 (4%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + ++ L + ++SSGL++ ++ ++A+ + ++ + L V
Sbjct: 3 ITNKLNFTNSVNNSMGGQSALYQISQQLSSGLKIQNSYEDASTYIDNTRLEYEIKTLEQV 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
++ + + + + K K+T T ++I E+ +++ +
Sbjct: 63 KESTSRAQEMTQNSMKALQDMVKLFENFKVKVTQAASDSNSQTSREAIAKELERIKESIV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A S + + + + + G + T Y +
Sbjct: 123 QLANTSINGQYLFAGSQVANKPFDSNGNYYGDKNNINVVTGAGTESPYNIPG-------- 174
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + D ++K ++ V + + + + +
Sbjct: 175 ---WDLFFKADGDYKKQISTNVSFTDNRWDLNKDSDKTKYLTGDSKWQQLIGQGYVKDNG 231
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ S ++ + + +
Sbjct: 232 LDPDKDFEYDDSKLDFPPTTLYVQGTRPDGTSFKSAVLVKPEDTLEDVMEDIGALYGNTP 291
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
D + LN A
Sbjct: 292 NNKVVEISMNDSGQIQITDLKQGNNKLDFHAVAFTPQADDRAELNNIIEAAQAEGITMDD 351
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD--AVEKGVGRLVDAD 414
+ + + G I ++++ + + + D + ++ D D
Sbjct: 352 VTN--RVMTAALGNPNN--GDITNLNNPVTITINNQNFTIDLKQTDFIKSKMTDTD 403
Score = 42.4 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 34/374 (9%), Positives = 87/374 (23%), Gaps = 11/374 (2%)
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSST 142
+ TI K T ++ + + G++ G +
Sbjct: 379 TINNQNFTIDLKQTDFIKSKMTDTDGNTTNGADYDNVYFEKNGNTVYGNVSQVIKGSNVY 438
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A+ + + D + + + + + N + +
Sbjct: 439 ATDSTKLSEVMAGDSLNGTTLNLKVSSKGGNSYDVTINLQNSTVSYPNPNNPGQTISFPI 498
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ + T S + AA+ Q+ V
Sbjct: 499 VHTDPTTGNSGVVTGSNDITYGQINDIIGMFAADKIPTQSIAATNGKVDANGYNNLQQLM 558
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ + S+ S + + +
Sbjct: 559 KDSQATVDVSMDYKGRISVTDKLSSGTNIEISLSDSQSGRFPQPPFTTTSLVANGPNFSF 618
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE------KLAMEEMVSFIDTQIKCAT 376
+ +S +D + ++ + M+ + +D +
Sbjct: 619 SANNSLVIDEPNVDIIKDLDSMIDAVLKGNMRADSESEDPRNTGMQGALKRLDHLADHIS 678
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
+G+ + I + V+ ++D D L +Q Q +++A
Sbjct: 679 KLNTTMGAYHNTIKDVNTRSTFLSVNVQSIKSNVIDMDYGEAMINLMQVQLAYQASLKA- 737
Query: 437 SIVNNSTARILSLF 450
++T LSL
Sbjct: 738 ----STTISQLSLL 747
>gi|170681553|ref|YP_001742380.1| lateral flagellar hook associated protein 3 [Escherichia coli
SMS-3-5]
gi|170519271|gb|ACB17449.1| lateral flagellar hook associated protein 3 [Escherichia coli
SMS-3-5]
Length = 309
Score = 59.8 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 64/187 (34%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q +++ +L V +++++G + +D+ + + A+
Sbjct: 3 VTTQQTYVSMTQSFNNLSGSLAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIQSLTESMV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTN 182
Query: 181 TDGTERY 187
++ +
Sbjct: 183 VAASDFF 189
Score = 39.0 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 42/134 (31%)
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + + VDT D +++ S+ +
Sbjct: 159 SYSYQGNSDHRQTTVSNGVEVDTNVAASDFFGSNLDVLNTLNSLSQELQNPDVDPADPQV 218
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ V +DT A+ +G + + + D + + ++ +G L D D
Sbjct: 219 QSDLQNAVDVVDTASDDLNASIASLGETQNTMSMLSDAQTDISTSNDELIGSLQDLDYGP 278
Query: 418 ESTRLSALQTQQQL 431
S + L+ +
Sbjct: 279 ASITFTGLEVAMEA 292
>gi|301645422|ref|ZP_07245363.1| flagellar hook-associated protein 3 [Escherichia coli MS 146-1]
gi|301076306|gb|EFK91112.1| flagellar hook-associated protein 3 [Escherichia coli MS 146-1]
Length = 317
Score = 59.8 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/187 (11%), Positives = 65/187 (34%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q D++ +L V +++++G ++ +D+ + + A+
Sbjct: 11 VTTQQTYVSMTQSFNDLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIEQY 70
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 71 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 130
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 131 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTN 190
Query: 181 TDGTERY 187
++ +
Sbjct: 191 VAASDFF 197
Score = 39.0 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 43/134 (32%)
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + + VDT D +++ S+ + +
Sbjct: 167 SYSYQGNSDHRQTTVSNGVEVDTNVAASDFFGSNLDVLNTLNSLSQELQAPNVDPADPQV 226
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ V +DT A+ +G + + + D + + ++ +G L D D
Sbjct: 227 QSDIQNAVDVVDTASDDLNASIASLGETQNTMSMLSDAQTDISTSNDELIGSLQDLDYGP 286
Query: 418 ESTRLSALQTQQQL 431
S + L+ +
Sbjct: 287 ASITFTGLEVAMEA 300
>gi|299822282|ref|ZP_07054168.1| flagellar hook-associated protein 3 [Listeria grayi DSM 20601]
gi|299815811|gb|EFI83049.1| flagellar hook-associated protein 3 [Listeria grayi DSM 20601]
Length = 291
Score = 59.8 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/256 (12%), Positives = 71/256 (27%), Gaps = 2/256 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN + ++ + N + Q +VS+G R ++N A + L+
Sbjct: 3 IATNQQTNTIINQINNANVLMGKYQTQVSTGKRYETMSENPAATTQVLSYNHILNQLNRE 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ S + A +S D MS I + + TD K++ +++ L+ +
Sbjct: 63 QKDVSDAKSLLTSADTSLSSMNDAMSRINAIVLQSLNGTTDEKNMNQAAEEVKGLLQSLV 122
Query: 124 R--GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ +G ++ S G + + + + E S
Sbjct: 123 SLGNTDDDGRYIFSGSSTNTKPFTINSQTGVIAYNGTTDNKNFKVSDSHEVEVYHDGSQL 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ L+ +S K + + L N +
Sbjct: 183 TQIFNTINQIVQAMQSGDKDSLRGFQEQNEANLDILSNKMTSVGGQKNSVLAYDNILSSK 242
Query: 242 AKGIATIPVPLPAAPA 257
+
Sbjct: 243 IIDYKDRKSKVDEVDG 258
>gi|218689036|ref|YP_002397248.1| flagellar hook-associated protein FlgL [Escherichia coli ED1a]
gi|331672602|ref|ZP_08373391.1| flagellar hook-associated protein 3 [Escherichia coli TA280]
gi|331682585|ref|ZP_08383204.1| flagellar hook-associated protein 3 [Escherichia coli H299]
gi|218426600|emb|CAR07428.1| flagellar hook-filament junction protein [Escherichia coli ED1a]
gi|281178192|dbj|BAI54522.1| flagellar hook-filament junction protein 3 FlgL [Escherichia coli
SE15]
gi|284920906|emb|CBG33969.1| flagellar hook-associated protein 3 [Escherichia coli 042]
gi|323190595|gb|EFZ75867.1| flagellar hook-associated protein 3 [Escherichia coli RN587/1]
gi|331070245|gb|EGI41611.1| flagellar hook-associated protein 3 [Escherichia coli TA280]
gi|331080216|gb|EGI51395.1| flagellar hook-associated protein 3 [Escherichia coli H299]
Length = 317
Score = 59.8 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 55/143 (38%), Gaps = 6/143 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A ++ S + A
Sbjct: 7 MMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLAR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIAR 124
+ KV + ++ +S+ + + KI D S+ ++I L+ QL ++A
Sbjct: 67 TFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASIAK 147
+ NG S
Sbjct: 127 TTDGNGRYIFAGYKTESAPFSEA 149
Score = 42.4 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 74/319 (23%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G ++ G + + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTESAPFSEADGKYEGGAESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|218704491|ref|YP_002412010.1| flagellar hook-associated protein FlgL [Escherichia coli UMN026]
gi|293404367|ref|ZP_06648361.1| flgL [Escherichia coli FVEC1412]
gi|298380147|ref|ZP_06989752.1| flagellar hook-associated protein 3 FlgL [Escherichia coli
FVEC1302]
gi|300899602|ref|ZP_07117841.1| flagellar hook-associated protein 3 [Escherichia coli MS 198-1]
gi|331662489|ref|ZP_08363412.1| flagellar hook-associated protein 3 [Escherichia coli TA143]
gi|218431588|emb|CAR12467.1| flagellar hook-filament junction protein [Escherichia coli UMN026]
gi|291428953|gb|EFF01978.1| flgL [Escherichia coli FVEC1412]
gi|298279845|gb|EFI21353.1| flagellar hook-associated protein 3 FlgL [Escherichia coli
FVEC1302]
gi|300356873|gb|EFJ72743.1| flagellar hook-associated protein 3 [Escherichia coli MS 198-1]
gi|331060911|gb|EGI32875.1| flagellar hook-associated protein 3 [Escherichia coli TA143]
Length = 317
Score = 59.8 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 53/146 (36%), Gaps = 3/146 (2%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
T + + + +++S+G RV + +D+ S A ++ S +
Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
A + KV + ++ +S+ + + KI D S+ ++I L+ QL +
Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
+A + NG +
Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEA 149
Score = 42.8 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 73/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G + + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEADGKYEGGAESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|315927562|gb|EFV06895.1| bacterial flagellin family protein [Campylobacter jejuni subsp.
jejuni DFVF1099]
Length = 659
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/217 (10%), Positives = 70/217 (32%), Gaps = 3/217 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + ++ L + +++SGL++ ++ ++A+ + ++ + L V
Sbjct: 3 ITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQV 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
++ + + + ++ K K+T T ++I E+ +++ +
Sbjct: 63 KESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A S + + + + + G + T Y + + +
Sbjct: 123 QLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINVVTGAGTESPYNIPGWDLFFKAD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI 217
D ++ + + D + S
Sbjct: 183 GDYKKQISTNVSFTDNRWDLNKDPDKTKYLTGDSKWQ 219
>gi|86152073|ref|ZP_01070285.1| flagellin family protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|315124382|ref|YP_004066386.1| flagellin family protein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85840858|gb|EAQ58108.1| flagellin family protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|315018104|gb|ADT66197.1| flagellin family protein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 750
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/372 (7%), Positives = 99/372 (26%), Gaps = 5/372 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + ++ L + +++SGL++ ++ ++A+ + ++ + L V
Sbjct: 3 ITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQV 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
++ + + + ++ K K+T T ++I E+ +++ +
Sbjct: 63 KESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD--NGKVQITTIDYYLDPETVLLD 178
+A S + + + + + G + G + + D
Sbjct: 123 QLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINVVTGAGTESPYNIPGWDLFFKAD 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ +++ + K ++ + + + + A
Sbjct: 183 GDYKKQISTNVSFTDNRWDLTQNPDKTKYLTGDSKWQQLIGQGYVKDNSLDADKDFEYDD 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
T+ V ++ + + + + +
Sbjct: 243 SKLDFPPTTLYVQGTKPDGTSFKSAVLVKPEDTLEDVMENIGALYGNTPNNKVVEVSMND 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
S ++ + D + +L ID+
Sbjct: 303 SGQIQITDLKQGNNKLDFHAVAFTPQADDKTELTGIIDAAKQEGISMNEVTNRVMQAATA 362
Query: 359 LAMEEMVSFIDT 370
++ ++
Sbjct: 363 APSNGDITKLNN 374
Score = 47.8 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 32/374 (8%), Positives = 86/374 (22%), Gaps = 11/374 (2%)
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSST 142
+ TI K T ++ + + G++ G ++
Sbjct: 379 TINNQQFTIDLKQTDFIKSKMTDTDGNAANGADYDNVYFEKNGNTVYGNVSQVIKGSNAY 438
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A+ + + D + + + + + N + +
Sbjct: 439 ATDSTKLSEVMAGDSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSYPDPNNPGQTISFPI 498
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ + T S + AA+ +
Sbjct: 499 MHTNPATGNSGVVTGSNDITYGQINDIIGMFAADKIPTTTIQANNGQINNADYTQIQQLM 558
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ + S+ S + + +
Sbjct: 559 KDSQATVDVSMDYKGRISVTDKLSSGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSF 618
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE------KLAMEEMVSFIDTQIKCAT 376
+ +S +D + ++ + M+ + +D +
Sbjct: 619 SANNSLTIDEPNVDIIKDLDSMIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVS 678
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
+G+ + I + V+ ++D D L +Q Q +++A
Sbjct: 679 KLNTTMGAYHNTIEGVNTRTSFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKA- 737
Query: 437 SIVNNSTARILSLF 450
++T LSL
Sbjct: 738 ----STTISQLSLL 747
>gi|305433257|ref|ZP_07402411.1| flagellin subunit protein FlaA [Campylobacter coli JV20]
gi|304443684|gb|EFM36343.1| flagellin subunit protein FlaA [Campylobacter coli JV20]
Length = 63
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 26/63 (41%)
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ + I + + V+ ++ D D A+ES S Q A++ N+ +L
Sbjct: 1 VTSTINNITVTQVNVKAAESQIRDVDFAAESANYSKANILAQSGSYAMAQANSVQQNVLR 60
Query: 449 LFR 451
L +
Sbjct: 61 LLQ 63
>gi|293409449|ref|ZP_06653025.1| flagellar hook-associated protein 3 [Escherichia coli B354]
gi|301023270|ref|ZP_07187067.1| flagellar hook-associated protein 3 [Escherichia coli MS 69-1]
gi|291469917|gb|EFF12401.1| flagellar hook-associated protein 3 [Escherichia coli B354]
gi|300397115|gb|EFJ80653.1| flagellar hook-associated protein 3 [Escherichia coli MS 69-1]
Length = 317
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 53/146 (36%), Gaps = 3/146 (2%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
T + + + +++S+G RV + +D+ S A ++ S +
Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
A + KV + ++ +S+ + + KI D S+ ++I L+ QL +
Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
+A + NG +
Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEA 149
Score = 42.4 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 72/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEADGEYVGGAESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTIRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|333004894|gb|EGK24414.1| flagellar hook-associated protein 3 [Shigella flexneri VA-6]
Length = 317
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 54/147 (36%), Gaps = 3/147 (2%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
T + + + +++S+G RV + +D+ S A ++ S +
Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
A + KV + ++ +S+ + + KI D S+ ++I L+ QL +
Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKS 148
+A + NG + +
Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEAN 150
Score = 40.9 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 74/319 (23%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G+ + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ +++ + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRTELGTQLNKLESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|110805099|ref|YP_688619.1| flagellar hook-associated protein FlgL [Shigella flexneri 5 str.
8401]
gi|110614647|gb|ABF03314.1| flagellar hook-associated protein FlgL [Shigella flexneri 5 str.
8401]
gi|333005649|gb|EGK25167.1| flagellar hook-associated protein 3 [Shigella flexneri K-218]
gi|333008288|gb|EGK27762.1| flagellar hook-associated protein 3 [Shigella flexneri K-272]
gi|333019778|gb|EGK39050.1| flagellar hook-associated protein 3 [Shigella flexneri K-227]
Length = 317
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 54/147 (36%), Gaps = 3/147 (2%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
T + + + +++S+G RV + +D+ S A ++ S +
Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
A + KV + ++ +S+ + + KI D S+ ++I L+ QL +
Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKS 148
+A + NG + +
Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEAN 150
Score = 42.4 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 74/319 (23%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G+ + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ +++ + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNKLESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|145845961|gb|ABP96970.1| flagellin [Cronobacter sakazakii]
gi|145845963|gb|ABP96971.1| flagellin [Cronobacter sakazakii]
gi|145845967|gb|ABP96973.1| flagellin [Cronobacter sakazakii]
gi|145845971|gb|ABP96975.1| flagellin [Cronobacter sakazakii]
gi|145845979|gb|ABP96979.1| flagellin [Cronobacter sakazakii]
Length = 189
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 56/166 (33%), Gaps = 3/166 (1%)
Query: 51 QIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS---KS 107
M S ++ + G S V A+ +++ + I+ S S
Sbjct: 1 NRMTSQVKGMTQAARNANDGISLVQTAEGNLNEINTNLQRIRELAVQAANDTNGSTDLTS 60
Query: 108 IQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTID 167
I +EITQ S++ IA G++FNG++ L + ++ + S G +
Sbjct: 61 INTEITQRLSEIDRIAGGANFNGKSLLNGSVSTALKIQVGAGTSSNDTISIGSNALINAT 120
Query: 168 YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
T+ S + + + + + I ++
Sbjct: 121 SGTLSSTLSTAISDNASAQTVISAADAAIAKIDTARSNMGAIQNRF 166
>gi|193069521|ref|ZP_03050475.1| flagellar hook-associated protein 3 [Escherichia coli E110019]
gi|192957269|gb|EDV87718.1| flagellar hook-associated protein 3 [Escherichia coli E110019]
Length = 317
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 54/147 (36%), Gaps = 3/147 (2%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
T + + + +++S+G RV + +D+ S A ++ S +
Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
A + KV + ++ +S+ + + KI D S+ ++I L+ QL +
Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKS 148
+A + NG + +
Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEAN 150
Score = 42.0 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 73/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G+ + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|149173750|ref|ZP_01852379.1| probable flagellar hook-associated protein 3 [Planctomyces maris
DSM 8797]
gi|148847280|gb|EDL61614.1| probable flagellar hook-associated protein 3 [Planctomyces maris
DSM 8797]
Length = 753
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 47/159 (29%), Gaps = 4/159 (2%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
L D L +Q +VS+G + S A+++ I++S I S +
Sbjct: 23 SLNDNALELAKLQQQVSTGQKYSLASESPGAALRTIILQSTFERQQQYQSNINTSMSILA 82
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+++ +S D +++ K G S S +E L Q+ + G R
Sbjct: 83 MSETSLSSVGDALNSAKAISL----SGVGSTSSDAERVALADQIASLRTQVINAGNTTFR 138
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
S + +
Sbjct: 139 GQYLFSGSQTNVAPFEEGANGLVVYHGDDHQIQTYINTQ 177
Score = 40.1 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 32/76 (42%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+DT+I G IGS S + ++ +K +++ + + D D+ ++ QT
Sbjct: 673 LDTEIARLNRVRGDIGSRMSVLEEADNRLKDQEVKIQESISQDFDTDLTQILVEITQRQT 732
Query: 428 QQQLAVQALSIVNNST 443
+ +Q S T
Sbjct: 733 AFEANLQVTSSALQLT 748
>gi|148269928|ref|YP_001244388.1| flagellin domain-containing protein [Thermotoga petrophila RKU-1]
gi|170288613|ref|YP_001738851.1| flagellin domain-containing protein [Thermotoga sp. RQ2]
gi|281412191|ref|YP_003346270.1| flagellin domain protein [Thermotoga naphthophila RKU-10]
gi|147735472|gb|ABQ46812.1| flagellin domain protein [Thermotoga petrophila RKU-1]
gi|170176116|gb|ACB09168.1| flagellin domain protein [Thermotoga sp. RQ2]
gi|281373294|gb|ADA66856.1| flagellin domain protein [Thermotoga naphthophila RKU-10]
Length = 258
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 12/116 (10%), Positives = 36/116 (31%), Gaps = 3/116 (2%)
Query: 47 WSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGT 103
+I Q ++ I G ++ A +G+ + +
Sbjct: 35 LTIQQKLRGQIEGYKTTLSQIYNGIGLLNTADSGLESISTSLQRARELAVQASNATLTDV 94
Query: 104 DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
+ Q E ++ ++ I + +++N + L D+ + + + +
Sbjct: 95 ERSMTQKEYEEIMRGVKRIIQQTTYNEQRVLAGDVRNLVIQTGPNEGQNVTVNIPN 150
Score = 42.8 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 33/95 (34%), Gaps = 1/95 (1%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + + ID ++ + G +GS +R+ + + K L + ++
Sbjct: 164 STFEGAQRSLETIDQALENISQIRGNVGSWMNRLESSARSVMNSYTELFKTES-LFEPNV 222
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A + +Q A+ + + +L L
Sbjct: 223 AELLLESTKEDILRQTALTGILFRMENAGNVLKLL 257
>gi|26247223|ref|NP_753263.1| flagellar hook-associated protein FlgL [Escherichia coli CFT073]
gi|91210235|ref|YP_540221.1| flagellar hook-associated protein FlgL [Escherichia coli UTI89]
gi|110641259|ref|YP_668989.1| flagellar hook-associated protein FlgL [Escherichia coli 536]
gi|117623269|ref|YP_852182.1| flagellar hook-associated protein FlgL [Escherichia coli APEC O1]
gi|191172449|ref|ZP_03033990.1| flagellar hook-associated protein 3 [Escherichia coli F11]
gi|215486292|ref|YP_002328723.1| flagellar hook-associated protein FlgL [Escherichia coli O127:H6
str. E2348/69]
gi|218557965|ref|YP_002390878.1| flagellar hook-associated protein FlgL [Escherichia coli S88]
gi|227886559|ref|ZP_04004364.1| flagellar hook-associated protein FlgL [Escherichia coli 83972]
gi|237706931|ref|ZP_04537412.1| flagellar hook-associated protein FlgL [Escherichia sp. 3_2_53FAA]
gi|300974387|ref|ZP_07172599.1| flagellar hook-associated protein 3 [Escherichia coli MS 45-1]
gi|300982572|ref|ZP_07176194.1| flagellar hook-associated protein 3 [Escherichia coli MS 200-1]
gi|301051130|ref|ZP_07197961.1| flagellar hook-associated protein 3 [Escherichia coli MS 185-1]
gi|306814068|ref|ZP_07448241.1| flagellar hook-associated protein FlgL [Escherichia coli NC101]
gi|312968843|ref|ZP_07783050.1| flagellar hook-associated protein 3 [Escherichia coli 2362-75]
gi|331646341|ref|ZP_08347444.1| flagellar hook-associated protein 3 [Escherichia coli M605]
gi|26107624|gb|AAN79823.1|AE016759_97 Flagellar hook-associated protein 3 [Escherichia coli CFT073]
gi|91071809|gb|ABE06690.1| flagellar hook-associated protein 3 [Escherichia coli UTI89]
gi|110342851|gb|ABG69088.1| flagellar hook-associated protein 3 [Escherichia coli 536]
gi|115512393|gb|ABJ00468.1| flagellar hook-associated protein FlgL [Escherichia coli APEC O1]
gi|190907333|gb|EDV66931.1| flagellar hook-associated protein 3 [Escherichia coli F11]
gi|215264364|emb|CAS08721.1| flagellar hook-filament junction protein [Escherichia coli O127:H6
str. E2348/69]
gi|218364734|emb|CAR02424.1| flagellar hook-filament junction protein [Escherichia coli S88]
gi|222032836|emb|CAP75575.1| flagellar hook-associated protein 3 [Escherichia coli LF82]
gi|226898141|gb|EEH84400.1| flagellar hook-associated protein FlgL [Escherichia sp. 3_2_53FAA]
gi|227836763|gb|EEJ47229.1| flagellar hook-associated protein FlgL [Escherichia coli 83972]
gi|294494044|gb|ADE92800.1| flagellar hook-associated protein 3 [Escherichia coli IHE3034]
gi|300297214|gb|EFJ53599.1| flagellar hook-associated protein 3 [Escherichia coli MS 185-1]
gi|300307153|gb|EFJ61673.1| flagellar hook-associated protein 3 [Escherichia coli MS 200-1]
gi|300410630|gb|EFJ94168.1| flagellar hook-associated protein 3 [Escherichia coli MS 45-1]
gi|305852705|gb|EFM53153.1| flagellar hook-associated protein FlgL [Escherichia coli NC101]
gi|307553085|gb|ADN45860.1| flagellin [Escherichia coli ABU 83972]
gi|307627447|gb|ADN71751.1| flagellar hook-associated protein FlgL [Escherichia coli UM146]
gi|312286245|gb|EFR14158.1| flagellar hook-associated protein 3 [Escherichia coli 2362-75]
gi|312945645|gb|ADR26472.1| flagellar hook-associated protein FlgL [Escherichia coli O83:H1
str. NRG 857C]
gi|315287425|gb|EFU46836.1| flagellar hook-associated protein 3 [Escherichia coli MS 110-3]
gi|315291061|gb|EFU50424.1| flagellar hook-associated protein 3 [Escherichia coli MS 153-1]
gi|315296714|gb|EFU56009.1| flagellar hook-associated protein 3 [Escherichia coli MS 16-3]
gi|320196435|gb|EFW71058.1| Flagellar hook-associated protein FlgL [Escherichia coli WV_060327]
gi|323953231|gb|EGB49097.1| flagellar hook protein 3 [Escherichia coli H252]
gi|323957907|gb|EGB53619.1| flagellar hook protein 3 [Escherichia coli H263]
gi|324007923|gb|EGB77142.1| flagellar hook-associated protein 3 [Escherichia coli MS 57-2]
gi|324013282|gb|EGB82501.1| flagellar hook-associated protein 3 [Escherichia coli MS 60-1]
gi|330910897|gb|EGH39407.1| flagellar hook-associated protein FlgL [Escherichia coli AA86]
gi|331045093|gb|EGI17220.1| flagellar hook-associated protein 3 [Escherichia coli M605]
Length = 317
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 53/146 (36%), Gaps = 3/146 (2%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
T + + + +++S+G RV + +D+ S A ++ S +
Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
A + KV + ++ +S+ + + KI D S+ ++I L+ QL +
Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
+A + NG +
Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEA 149
Score = 42.8 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 73/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G+ + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEADGDYVGGTESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|300936134|ref|ZP_07151073.1| flagellar hook-associated protein 3 [Escherichia coli MS 21-1]
gi|300458712|gb|EFK22205.1| flagellar hook-associated protein 3 [Escherichia coli MS 21-1]
Length = 317
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 64/187 (34%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q +++ +L V +++++G + +D+ + + A+
Sbjct: 11 VTTQQTYVSMTQSFNNLSGSLAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 70
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 71 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIQSLTESMV 130
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 131 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTN 190
Query: 181 TDGTERY 187
++ +
Sbjct: 191 VAASDFF 197
Score = 38.6 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 42/134 (31%)
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + + VDT D +++ S+ +
Sbjct: 167 SYSYQGNSDHRQTTVSNGVEVDTNVAASDFFGSNLDVLNTLNSLSQELQNPDVDPADPQV 226
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ V +DT A+ +G + + + D + + ++ +G L D D
Sbjct: 227 QSDIQNAVDVVDTASDDLNASIASLGETQNTMSMLSDAQTDISTSNDELIGSLQDLDYGP 286
Query: 418 ESTRLSALQTQQQL 431
S + L+ +
Sbjct: 287 ASITFTGLEVAMEA 300
>gi|297521523|ref|ZP_06939909.1| flagellar hook-associated protein FlgL [Escherichia coli OP50]
Length = 230
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 54/147 (36%), Gaps = 3/147 (2%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
T + + + +++S+G RV + +D+ S A ++ S +
Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
A + KV + ++ +S+ + + KI D S+ ++I L+ QL +
Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKS 148
+A + NG + +
Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEAN 150
>gi|94995575|gb|ABF50699.1| flagellin [Borrelia lonestari]
Length = 136
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 31/91 (34%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
++ + ++ I+ I+ T +G+ +R+ + + ++
Sbjct: 46 QGGISSPINVTTAIDANASLTKIEDAIRMVTDQRANLGAFQNRLESVKASTDYAIENLKA 105
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQAL 436
++ DA M E + Q A+ +
Sbjct: 106 SYAQIKDAIMTDEIVASTTNSILTQSAMAMI 136
>gi|218703532|ref|YP_002411051.1| lateral flagellar hook associated FlgL-like protein [Escherichia
coli UMN026]
gi|293403362|ref|ZP_06647453.1| predicted protein [Escherichia coli FVEC1412]
gi|298378973|ref|ZP_06988854.1| predicted protein [Escherichia coli FVEC1302]
gi|218430629|emb|CAR11495.1| Lateral flagellar hook associated protein 3 (FlgL-like)
[Escherichia coli UMN026]
gi|291429215|gb|EFF02235.1| predicted protein [Escherichia coli FVEC1412]
gi|298280086|gb|EFI21590.1| predicted protein [Escherichia coli FVEC1302]
Length = 309
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 64/187 (34%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q +++ +L V +++++G + +D+ + + A+
Sbjct: 3 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 123 VALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTN 182
Query: 181 TDGTERY 187
++ +
Sbjct: 183 VAASDFF 189
Score = 39.7 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 16/134 (11%), Positives = 43/134 (32%)
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + + VDT D +++ ++ + +
Sbjct: 159 SYSYQGNSDHRQTTVSNGVEVDTNVAASDFFGSNLDVLNTLNTLSQELQDPNVDPADPQV 218
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ V +DT A+ +G + + + D + + ++ +G L D D
Sbjct: 219 QSDIQNAVDVVDTASDNLNASIASLGETQNTMSMLSDAQTDISTSNDELIGSLQDLDYGP 278
Query: 418 ESTRLSALQTQQQL 431
S + L+ +
Sbjct: 279 ASITFTGLEVAMEA 292
>gi|306821565|ref|ZP_07455163.1| flagellar hook-associated protein FlgL [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550310|gb|EFM38303.1| flagellar hook-associated protein FlgL [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 946
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 63/204 (30%), Gaps = 7/204 (3%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQD---RVSSGLRVSDAADNAAYWSIAQIMKSDN 57
M I +M ++ LRD N NLE + + +S G + +D+ S A + ++
Sbjct: 1 MVRI---TQSMQIARTLRDQNINLERMSEYSKNMSDGTTLHRPSDDPIRVSRAMRLMAEL 57
Query: 58 GALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQS 117
+ SS V + +++ + T ++ Q +L+
Sbjct: 58 NVNETYKSDLDAASSWVSKTGESLKTLSSIIARTRELTTQAATGTLTAEDKQKIAAELK- 116
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
QL+ A + G T + G + N Y
Sbjct: 117 QLKAAAINMGNDDYMGRYQFSGYKTDVKFLNEDGKYNTQLNLAGLNYEKINYNIGVGQKT 176
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQ 201
D + G + +G K +
Sbjct: 177 DINISGVQVFGNEYFTTKTRAMNS 200
Score = 39.3 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 28/354 (7%), Positives = 72/354 (20%)
Query: 84 AIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTA 143
+ +K G ++ ++ ++ + + L S
Sbjct: 581 VANSTHLLKGIAITKTYSGKNANGTDKTNDEILKEIAKDLQAQIDQKAAYSNPPLTQSKI 640
Query: 144 SIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
++ + D ++ + P
Sbjct: 641 NVVAENGRIKMLVDGNLKYELKNVENNIAPNTFDTTAKTPVRDTKSDLTLPMPTINPTGD 700
Query: 204 KDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTS 263
++ + + + T+ K A A
Sbjct: 701 TNVYMDINLGISHYKKDEKGNPITTEKESTINADKITLNKTYPRKKADGTAYTDAEIKDM 760
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTEST 323
+ K + + N I T+ T
Sbjct: 761 IFNDVKKAIEEKLGQINPPLDKKAINISMVGNDIKLSVYPDMEVKMSSNPQKPDSLTKDT 820
Query: 324 TLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIG 383
T ++ + + R + M+ ID K G G
Sbjct: 821 TFMPKQTADLQPQREMMPFFEMMDRLTQFMEEGNSKGLSRMLDVIDYHAKNNQKNQGIGG 880
Query: 384 SISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
S + + ++ + + D D ++S Q + ++ +
Sbjct: 881 GKSKMYDIMISRTQDVKLNYTELLSETRDTDYREMVAKMSVAQNVYRASLAVTA 934
>gi|74311644|ref|YP_310063.1| flagellar hook-associated protein FlgL [Shigella sonnei Ss046]
gi|188494376|ref|ZP_03001646.1| flagellar hook-associated protein 3 [Escherichia coli 53638]
gi|194438084|ref|ZP_03070177.1| flagellar hook-associated protein 3 [Escherichia coli 101-1]
gi|218553661|ref|YP_002386574.1| flagellar hook-associated protein FlgL [Escherichia coli IAI1]
gi|253773893|ref|YP_003036724.1| flagellar hook-associated protein FlgL [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161189|ref|YP_003044297.1| flagellar hook-associated protein FlgL [Escherichia coli B str.
REL606]
gi|300928365|ref|ZP_07143899.1| flagellar hook-associated protein 3 [Escherichia coli MS 187-1]
gi|331652136|ref|ZP_08353155.1| flagellar hook-associated protein 3 [Escherichia coli M718]
gi|73855121|gb|AAZ87828.1| flagellar hook-filament junction protein [Shigella sonnei Ss046]
gi|188489575|gb|EDU64678.1| flagellar hook-associated protein 3 [Escherichia coli 53638]
gi|194423020|gb|EDX39014.1| flagellar hook-associated protein 3 [Escherichia coli 101-1]
gi|218360429|emb|CAQ97983.1| flagellar hook-filament junction protein [Escherichia coli IAI1]
gi|253324937|gb|ACT29539.1| flagellar hook-associated protein 3 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973090|gb|ACT38761.1| flagellar hook-associated protein L [Escherichia coli B str.
REL606]
gi|253977304|gb|ACT42974.1| flagellar hook-associated protein L [Escherichia coli BL21(DE3)]
gi|300463623|gb|EFK27116.1| flagellar hook-associated protein 3 [Escherichia coli MS 187-1]
gi|313848603|emb|CAQ31604.2| flagellar biosynthesis; hook-filament junction protein, subunit of
Flagellum [Escherichia coli BL21(DE3)]
gi|323165593|gb|EFZ51380.1| flagellar hook-associated protein 3 [Shigella sonnei 53G]
gi|323947615|gb|EGB43619.1| flagellar hook-associated protein 3 [Escherichia coli H120]
gi|323962682|gb|EGB58260.1| flagellar hook protein 3 [Escherichia coli H489]
gi|323973328|gb|EGB68517.1| flagellar hook protein 3 [Escherichia coli TA007]
gi|331050414|gb|EGI22472.1| flagellar hook-associated protein 3 [Escherichia coli M718]
gi|332342629|gb|AEE55963.1| flagellar hook-associated protein FlgL [Escherichia coli UMNK88]
Length = 317
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 54/147 (36%), Gaps = 3/147 (2%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
T + + + +++S+G RV + +D+ S A ++ S +
Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
A + KV + ++ +S+ + + KI D S+ ++I L+ QL +
Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKS 148
+A + NG + +
Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEAN 150
Score = 42.8 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 73/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G+ + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|15801200|ref|NP_287217.1| flagellar hook-associated protein FlgL [Escherichia coli O157:H7
EDL933]
gi|15830715|ref|NP_309488.1| flagellar hook-associated protein FlgL [Escherichia coli O157:H7
str. Sakai]
gi|168747141|ref|ZP_02772163.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC4113]
gi|168758624|ref|ZP_02783631.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC4401]
gi|168764495|ref|ZP_02789502.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC4501]
gi|168767742|ref|ZP_02792749.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC4486]
gi|168773928|ref|ZP_02798935.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC4196]
gi|168783613|ref|ZP_02808620.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC4076]
gi|168790018|ref|ZP_02815025.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC869]
gi|168802028|ref|ZP_02827035.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC508]
gi|195935473|ref|ZP_03080855.1| flagellar hook-associated protein FlgL [Escherichia coli O157:H7
str. EC4024]
gi|208809642|ref|ZP_03251979.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC4206]
gi|208816148|ref|ZP_03257327.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC4045]
gi|208822389|ref|ZP_03262708.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC4042]
gi|209395853|ref|YP_002269929.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC4115]
gi|217328431|ref|ZP_03444513.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
TW14588]
gi|254792465|ref|YP_003077302.1| flagellar hook-associated protein FlgL [Escherichia coli O157:H7
str. TW14359]
gi|261227012|ref|ZP_05941293.1| flagellar hook-filament junction protein [Escherichia coli O157:H7
str. FRIK2000]
gi|261256246|ref|ZP_05948779.1| flagellar hook-filament junction protein [Escherichia coli O157:H7
str. FRIK966]
gi|291282103|ref|YP_003498921.1| Flagellar hook-associated protein 3 [Escherichia coli O55:H7 str.
CB9615]
gi|12514624|gb|AAG55829.1|AE005318_6 flagellar biosynthesis; hook-filament junction protein [Escherichia
coli O157:H7 str. EDL933]
gi|13360925|dbj|BAB34884.1| flagellar hook-filament junction protein 3 FlgL [Escherichia coli
O157:H7 str. Sakai]
gi|187770518|gb|EDU34362.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC4196]
gi|188018057|gb|EDU56179.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC4113]
gi|188999096|gb|EDU68082.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC4076]
gi|189354584|gb|EDU73003.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC4401]
gi|189363052|gb|EDU81471.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC4486]
gi|189365534|gb|EDU83950.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC4501]
gi|189370497|gb|EDU88913.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC869]
gi|189375934|gb|EDU94350.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC508]
gi|208729443|gb|EDZ79044.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC4206]
gi|208732796|gb|EDZ81484.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC4045]
gi|208737874|gb|EDZ85557.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC4042]
gi|209157253|gb|ACI34686.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
EC4115]
gi|209773308|gb|ACI84966.1| flagellar hook-filament junction protein 3 FlgL [Escherichia coli]
gi|209773310|gb|ACI84967.1| flagellar hook-filament junction protein 3 FlgL [Escherichia coli]
gi|209773312|gb|ACI84968.1| flagellar hook-filament junction protein 3 FlgL [Escherichia coli]
gi|209773314|gb|ACI84969.1| flagellar hook-filament junction protein 3 FlgL [Escherichia coli]
gi|209773316|gb|ACI84970.1| flagellar hook-filament junction protein 3 FlgL [Escherichia coli]
gi|217318858|gb|EEC27284.1| flagellar hook-associated protein 3 [Escherichia coli O157:H7 str.
TW14588]
gi|254591865|gb|ACT71226.1| flagellar hook-filament junction protein [Escherichia coli O157:H7
str. TW14359]
gi|290761976|gb|ADD55937.1| Flagellar hook-associated protein 3 [Escherichia coli O55:H7 str.
CB9615]
gi|320189766|gb|EFW64422.1| Flagellar hook-associated protein FlgL [Escherichia coli O157:H7
str. EC1212]
gi|320637534|gb|EFX07334.1| flagellar hook-associated protein FlgL [Escherichia coli O157:H7
str. G5101]
gi|320643095|gb|EFX12296.1| flagellar hook-associated protein FlgL [Escherichia coli O157:H-
str. 493-89]
gi|320648553|gb|EFX17208.1| flagellar hook-associated protein FlgL [Escherichia coli O157:H-
str. H 2687]
gi|320653867|gb|EFX21941.1| flagellar hook-associated protein FlgL [Escherichia coli O55:H7
str. 3256-97 TW 07815]
gi|320659347|gb|EFX26916.1| flagellar hook-associated protein FlgL [Escherichia coli O55:H7
str. USDA 5905]
gi|320664482|gb|EFX31633.1| flagellar hook-associated protein FlgL [Escherichia coli O157:H7
str. LSU-61]
gi|326339305|gb|EGD63119.1| Flagellar hook-associated protein FlgL [Escherichia coli O157:H7
str. 1125]
gi|326344734|gb|EGD68482.1| Flagellar hook-associated protein FlgL [Escherichia coli O157:H7
str. 1044]
Length = 317
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 53/144 (36%), Gaps = 3/144 (2%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
T + + + +++S+G RV + +D+ S A ++ S +
Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
A + KV + ++ +S+ + + KI D S+ ++I L+ QL +
Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDNDRASLATDIQGLRDQLLN 123
Query: 122 IARGSSFNGENWLRTDLGSSTASI 145
+A + NG +
Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFS 147
Score = 42.8 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 73/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDNDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G+ + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEVNGDYVGGTESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|323976262|gb|EGB71355.1| flagellar hook protein 3 [Escherichia coli TW10509]
Length = 309
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 63/187 (33%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q +++ L V +++++G + +D+ + + A+
Sbjct: 3 VTTQQTYVSMTQSFNNLSGELAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 63 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 123 AALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDRYSYQGNSDHRQTTVSNGVEVDTN 182
Query: 181 TDGTERY 187
++ +
Sbjct: 183 VAASDFF 189
Score = 38.6 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 16/133 (12%), Positives = 43/133 (32%)
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ + VDT D +++ ++ + + +
Sbjct: 160 YSYQGNSDHRQTTVSNGVEVDTNVAASDFFGSNLDVLNTLNALSQELQNPNVDPADPQVQ 219
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
++ V+ +DT A+ +G + + + D + + ++ +G L D D
Sbjct: 220 SDIQNAVNVVDTASDDLNASIASLGETQNTMSMLSDAQTDISTSNDELIGSLQDLDYGPA 279
Query: 419 STRLSALQTQQQL 431
S + L+ +
Sbjct: 280 SITFTGLEVAMEA 292
>gi|261339383|ref|ZP_05967241.1| flagellar hook-associated protein 3 [Enterobacter cancerogenus ATCC
35316]
gi|288318184|gb|EFC57122.1| flagellar hook-associated protein 3 [Enterobacter cancerogenus ATCC
35316]
Length = 317
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/197 (12%), Positives = 54/197 (27%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + D +++SSG RV+ +D+ S A ++ S
Sbjct: 3 ISTQMMYEQNMRGITDSQSRWLGYGEQMSSGKRVNRPSDDPIAASQAVVLSQAQSQNSQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ A + KV + + + + + + + KI S T L+ +
Sbjct: 63 ALARTFATQKVSLEENVLGQVTTAIQSAQEKIVYAGNGSLSDNDRASLATDLKGIRDQLM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N G T ++ + + + D
Sbjct: 123 NLANSTDGNGRYIFAGYKTDNVPFDQTNGDYSGGSEAISQQVDSARNMQISHTGSEVFDK 182
Query: 184 TERYGLLDRNHKIKVEP 200
+ +
Sbjct: 183 FTSNAKPEPDGSTPETN 199
Score = 41.7 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 26/319 (8%), Positives = 73/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ + + + S + +
Sbjct: 1 MRISTQMMYEQNMRGITDSQSRWLGYGEQMSSGKRVNRPSDDPIAASQAVVLSQAQSQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ K T + + + ++
Sbjct: 61 QFALARTFATQKVSLEENVLGQVTTAIQSAQEKIVYAGNGSLSDNDRASLATDLKGIRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G G+ A ++ ++ + T ++V
Sbjct: 121 LMNLANSTDGNGRYIFAGYKTDNVPFDQTNGDYSGGSEAISQQVDSARNMQISHTGSEVF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ + + +I T T ++ + + +
Sbjct: 181 DKFTSNAKPEPDGSTPETNLFKILDKAIDALNTPTESDQTKMDALTDSINQANRGLSNAL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+G+ + + + + + LVD D + + + QQ A
Sbjct: 241 DNVLTVRADLGTKLTELDKLDALGDDRALGQTQQMSDLVDVDWNAAISSYT----MQQAA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA + +SLF+
Sbjct: 297 LQASYKAFSDMQG-MSLFQ 314
>gi|124516724|gb|EAY58232.1| Flagellar hook-associated protein FlgL [Leptospirillum rubarum]
Length = 312
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/189 (10%), Positives = 54/189 (28%), Gaps = 3/189 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
NL V ++SSG + D + + + + + G++++ + ++ +
Sbjct: 22 DNLYDVDRQISSGKQFETPGDAPGRMGESLRINRNLSVTRRIIENAREGANRLKLMESIL 81
Query: 82 SKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ ++ K D + E+ + Q+ +A + + T++
Sbjct: 82 DQVGTLLIRAKGLAIRMANDTMTAEDRRVGAQELERTLEQVVSLANTKAGEQYLFSGTNV 141
Query: 139 GSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKV 198
+ G + T+ P +L +
Sbjct: 142 TRPPFLFTDPKLNPGSVAYLGNHRSETVQQGFSPRQREAGLMPVTEAGDRILGDSAADPF 201
Query: 199 EPQVLKDID 207
+ L +
Sbjct: 202 GNKPLPVMR 210
Score = 44.3 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 28/71 (39%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
N++ + + +D I T A +G+ I D ++ + + + D D+
Sbjct: 219 NDQPQITRSIDELDRTIHSVTERAAVLGTRERAIRTTVDRLEKYTISQKTLKSQNEDVDV 278
Query: 416 ASESTRLSALQ 426
++L+ Q
Sbjct: 279 PKAVSKLALNQ 289
>gi|302669848|ref|YP_003829808.1| flagellar hook-associated protein FlgL [Butyrivibrio
proteoclasticus B316]
gi|302394321|gb|ADL33226.1| flagellar hook-associated protein FlgL [Butyrivibrio
proteoclasticus B316]
Length = 703
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/278 (8%), Positives = 75/278 (26%), Gaps = 5/278 (1%)
Query: 25 EVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA-VSDAIGLGSSKVDIAKAGMSK 83
+ + +S+G +++ +D+ A ++S+ LS S +++ +S
Sbjct: 24 DQLNTMMSTGKKLTRPSDDPVIAIRALRLRSNVTQLSQYYEKNAKDAESWLNVTADALST 83
Query: 84 AIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTA 143
V++ +G+ ++ + +Q+ +A+ G +
Sbjct: 84 ITAVLTD----SVKQATKGSRMDLTLDDLDTIITQMDALAKEYYSTGNVDYAGRYVFTGY 139
Query: 144 SIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVL 203
++ + + + ++ + L +E ++
Sbjct: 140 RTDTALTFDKTTTADYTDINDEFNASIISDSKRILGKYKLDSATVLDKTEADAVLENSIV 199
Query: 204 KDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTS 263
+ + + ++ + A +++ T
Sbjct: 200 ERTVGRIRLSYDNLNYIEPNNANGITNEAMLKYRENLVQPATSSVSSTTDVINVTFKTVD 259
Query: 264 GTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
G + + + + Y D T S
Sbjct: 260 GVTRTATIPINDDGQYKITNEEDGVSYTATTELDGSYM 297
>gi|187730939|ref|YP_001880748.1| flagellar hook-associated protein FlgL [Shigella boydii CDC
3083-94]
gi|187427931|gb|ACD07205.1| flagellar hook-associated protein 3 [Shigella boydii CDC 3083-94]
Length = 317
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 55/141 (39%), Gaps = 6/141 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A ++ S + A
Sbjct: 7 MMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLAR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
+ KV + ++ +S+ + + KI D S+ ++I ++ QL ++A
Sbjct: 67 TFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGIRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASI 145
+ NG +
Sbjct: 127 TTDGNGRYIFAGYKTETAPFS 147
Score = 42.0 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 72/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGIRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|308186400|ref|YP_003930531.1| Flagellar hook-associated protein 3 (HAP3) [Pantoea vagans C9-1]
gi|308056910|gb|ADO09082.1| Flagellar hook-associated protein 3 (HAP3) [Pantoea vagans C9-1]
Length = 321
Score = 59.4 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/228 (12%), Positives = 57/228 (25%), Gaps = 3/228 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN + + D + +++SSG RV++ +D+ S A ++
Sbjct: 3 ISTNMIFEQQVRGITDSQASWLKSGEQLSSGRRVNNPSDDPIAASRAVVLSQTQQQGKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL---QSQLR 120
+ A + + + + D + + I G S TQL ++QL
Sbjct: 63 ALARTFAEQGLSLEENTLKGVTDGIIAAQGLIVNGSTGTLSDSDRGSIATQLEGIRAQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ A NG S + + G + D+
Sbjct: 123 NQANSQDANGRYIFAGYKTDSAPFVDTAGTGVSYAGGTDAITQKVDTSRTMTVGHTGDNI 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
+ + T
Sbjct: 183 FMAISGNATKEPDGSASETNVFKMLDSAIAALKVPQDDADAATKQTFQ 230
Score = 37.4 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 19/180 (10%), Positives = 44/180 (24%), Gaps = 4/180 (2%)
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
A +G ++ G + T + D T + N
Sbjct: 125 ANSQDANGRYIFAGYKTDSAPFVDTAGTGVSYAGGTDAITQKVDTSRTMTVGHTGDNIFM 184
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF----IDTQI 372
+ +T + + + K ++ + + +
Sbjct: 185 AISGNATKEPDGSASETNVFKMLDSAIAALKVPQDDADAATKQTFQDAMDKTNRGLGNSL 244
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+IG+ S I + LV+ D+ ++ + QT Q +
Sbjct: 245 NNVLTVRSEIGTQLSEIDTLNAQGDDRSVIYSSQMSDLVNVDLTEAASSYTMQQTALQAS 304
>gi|229132587|ref|ZP_04261435.1| Flagellin [Bacillus cereus BDRD-ST196]
gi|228650819|gb|EEL06806.1| Flagellin [Bacillus cereus BDRD-ST196]
Length = 75
Score = 59.0 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
I TN +M A Q L + + V + + +G ++++A+DN A +I M + +
Sbjct: 3 IGTNVLSMDARQSLYENEKRMNVAMEHLVTGKKLNNASDNPANIAIVTRMHARASGM 59
>gi|16760060|ref|NP_455677.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29142169|ref|NP_805511.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213424686|ref|ZP_03357451.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213865496|ref|ZP_03387615.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|25299199|pir||AI0640 flagellar hook-associated protein 3 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16502354|emb|CAD08308.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29137799|gb|AAO69360.1| flagellar hook-associated protein 3 [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
Length = 317
Score = 59.0 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/193 (12%), Positives = 55/193 (28%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + +++S+G RV++ +D+ S A ++ S
Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLFQAQAQNSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ A + KV + ++ +S+ + T + KI S T LQ +
Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N G T + V +
Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQQVDSARTMVIGHTGAQIFNS 182
Query: 184 TERYGLLDRNHKI 196
+ + +
Sbjct: 183 ITSNAVPEPDGSD 195
>gi|307087702|gb|ADN26828.1| flagellin [uncultured Borrelia sp.]
gi|307087704|gb|ADN26829.1| flagellin [uncultured Borrelia sp.]
gi|307087706|gb|ADN26830.1| flagellin [uncultured Borrelia sp.]
Length = 158
Score = 59.0 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 3/95 (3%)
Query: 56 DNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEI 112
LS S + + + +++ V+ +K D SIQ EI
Sbjct: 1 QIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEI 60
Query: 113 TQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
QL ++ IA + +N + L + A+
Sbjct: 61 EQLTDEINRIADQAQYNQMHMLSNKSAAQNVKTAE 95
>gi|300899459|ref|ZP_07117707.1| flagellar hook-associated protein 3 [Escherichia coli MS 198-1]
gi|300356938|gb|EFJ72808.1| flagellar hook-associated protein 3 [Escherichia coli MS 198-1]
Length = 317
Score = 59.0 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 64/187 (34%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + +S +Q +++ +L V +++++G + +D+ + + A+
Sbjct: 11 VTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKEILQPSDDPIAATRITQLNRQQSAIEQY 70
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ + + + +++ + G S+ +I L +
Sbjct: 71 QSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTESMV 130
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+G + +A G + D + V +D++
Sbjct: 131 VALNYQDEDGHYVFGGTINDQPPIVAVDDDGDGVTDSYSYQGNSDHRQTTVSNGVEVDTN 190
Query: 181 TDGTERY 187
++ +
Sbjct: 191 VAASDFF 197
Score = 39.3 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 16/134 (11%), Positives = 43/134 (32%)
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + + VDT D +++ ++ + +
Sbjct: 167 SYSYQGNSDHRQTTVSNGVEVDTNVAASDFFGSNLDVLNTLNTLSQELQDPNVDPADPQV 226
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ V +DT A+ +G + + + D + + ++ +G L D D
Sbjct: 227 QSDIQNAVDVVDTASDNLNASIASLGETQNTMSMLSDAQTDISTSNDELIGSLQDLDYGP 286
Query: 418 ESTRLSALQTQQQL 431
S + L+ +
Sbjct: 287 ASITFTGLEVAMEA 300
>gi|221215579|ref|ZP_03588542.1| flagellar hook-associated protein 3 [Burkholderia multivorans CGD1]
gi|221164567|gb|EED97050.1| flagellar hook-associated protein 3 [Burkholderia multivorans CGD1]
Length = 411
Score = 59.0 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 54/451 (11%), Positives = 112/451 (24%), Gaps = 49/451 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T ++ D L + ++SSG+ +S AADN + A + + LS
Sbjct: 3 ISTAQFYQLNVAQMSDQQAQLAQLYQQISSGVSLSTAADNPLGAAQAVQLSMTSATLSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ + S + ++ +++++I + + G +D ++ +++ + QL
Sbjct: 63 ATNQNVALSSLQKEDQALTSVNNLLNSIHSIVIRAGDGALSDSDRSALATQLQGYRDQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G ++ + G D G Q+ D + S
Sbjct: 123 TLANSTDGAGNYLFAGYQSTTAPFANGTGGGVVYSGDRGARQVQIADTRTIAQGDDGASV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G
Sbjct: 183 FLSVPMLGSQPVPAAGAANQGTA------------------------------------- 205
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ A T + + + + T+
Sbjct: 206 ----TIGAVTITDPSAATNTHTFTITFGGTSAAPTYTVTDETVAPPTTTAPQPYAAGTAI 261
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+V G T A A
Sbjct: 262 ALGNGLSVPVSGTPSPNDTFSVTPAPQAGTDVFATLDTMIAALKVPIGSDTVAAAKLANA 321
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
M + +D + +G I + + V + L +M S +
Sbjct: 322 MTTGTTKLDNTMTNILTVQASVGGREQEIQAMQAVNQTNTLQVTSNLADLTSTNMVSTIS 381
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ +Q A +A + + N LSLF+
Sbjct: 382 QFLQMQNALTGAQKAYAQLQN-----LSLFQ 407
>gi|218700415|ref|YP_002408044.1| flagellar hook-associated protein FlgL [Escherichia coli IAI39]
gi|218370401|emb|CAR18206.1| flagellar hook-filament junction protein [Escherichia coli IAI39]
Length = 317
Score = 59.0 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 54/143 (37%), Gaps = 6/143 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A + S + A
Sbjct: 7 MMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVFSQAQAQNSQYTLAR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIAR 124
+ KV + ++ +S+ + + KI D S+ ++I L+ QL ++A
Sbjct: 67 TFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASIAK 147
+ NG S
Sbjct: 127 TTDGNGRYIFAGYKTESAPFSEA 149
Score = 43.2 bits (99), Expect = 0.096, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 74/319 (23%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVFSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G ++ G + + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTESAPFSEADGKYEGGAESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|225851147|ref|YP_002731381.1| flagellar hook-associated protein 3 [Persephonella marina EX-H1]
gi|225646101|gb|ACO04287.1| flagellar hook-associated protein 3 [Persephonella marina EX-H1]
Length = 321
Score = 59.0 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/166 (12%), Positives = 50/166 (30%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
++E ++SG ++ +DN + K N + + I L +D+A++ +
Sbjct: 21 KDIERYTKELASGKKLLSPSDNTIDTVRSLRFKRLNNDIETYNRNIDLVKGTLDVAESTL 80
Query: 82 SKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSS 141
++ ++ +I + G + S LRD + R G
Sbjct: 81 GNIVNAGQEVRVEIIRLMNTGVLDYEDAQILRDYLSSLRDYIINQANVSIGDSRIFGGVK 140
Query: 142 TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
+ + + + + + T S
Sbjct: 141 SQIDPFDPVTGVYQGETVETTVPVAKGVELNTTFNGQSYLGVNTNT 186
Score = 51.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/178 (14%), Positives = 48/178 (26%), Gaps = 5/178 (2%)
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
T + G + K + S + NT ++
Sbjct: 146 FDPVTGVYQGETVETTVPVAKGVELNTTFNGQSYLGVNTNTGKMAMVDAIDEIISIIDGA 205
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ T N + ++ D + KIG +
Sbjct: 206 SASPPTRSLEEINTATINVTVDGKNYGNVTILEAFDIGLDKVMQQRSKIGEQMVIADNLK 265
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MR + + +L DAD A + L +T + + +++ N LSL +
Sbjct: 266 VQNDTMRVNFSELISKLEDADYAGVISELEKSKTAYEALLASIAQ-NKD----LSLLK 318
>gi|67641546|ref|ZP_00440323.1| flagellar hook-associated protein 3 [Burkholderia mallei GB8 horse
4]
gi|238522497|gb|EEP85941.1| flagellar hook-associated protein 3 [Burkholderia mallei GB8 horse
4]
Length = 397
Score = 59.0 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/435 (10%), Positives = 107/435 (24%), Gaps = 45/435 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + D + + +VSSG+ ++ ADN + A + + + L+
Sbjct: 3 ISSTQLYSLNVDMMNDQQAQIAQLYQQVSSGISLTTPADNPLAAAQAVQLSATSATLAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMS---TIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + + + ++ DV++ G +D ++ ++I + L
Sbjct: 63 TQNQTIVQTALQTEDTTLTSVNDVLNAAYQALMHAGDGGLSDSDRAALAAQIQGSRDHLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G ++ K G D G + D + +
Sbjct: 123 TLANTADGAGNYLFAGFQPTTQPFSNKPGGGVTYAGDYGARAVQIADTRTVSQGDNGANV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G L VS+ + S +T +F +
Sbjct: 183 FMSVPFLGSLPVPAAGASNTGTGTIGAVSITNPSDPTNTHQFTI---------------- 226
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + + +S I +G + V T
Sbjct: 227 -----TFGGTAAAPTYTVTDNSVTPPTTTAAQAYSSGQGINLGGQTVAVSGKPAVGDTFT 281
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
V T V +
Sbjct: 282 VTPAPQAGTDVFATLDTVIAALKSPVGNSQTAS---------------------TALTNT 320
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
M + + + +G + + + L D ++ + +
Sbjct: 321 MATASTKLMNTMTNVLTVQASVGGRLQEVKAMQAVTTTNTLQTTNSLSNLTDTNLPAAIS 380
Query: 421 RLSALQTQQQLAVQA 435
+ LQ A +A
Sbjct: 381 QFLQLQNSLSAAQKA 395
>gi|218778839|ref|YP_002430157.1| flagellar hook-associated protein 3 [Desulfatibacillum alkenivorans
AK-01]
gi|218760223|gb|ACL02689.1| Flagellar hook-associated protein 3 [Desulfatibacillum alkenivorans
AK-01]
Length = 290
Score = 59.0 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 12/109 (11%), Positives = 44/109 (40%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
+ + + L + ++ ++S ++ AD+ + ++SD + ++ I
Sbjct: 7 IISSNVTFGLGRLTTAMDRANLTIASQRQILTMADDPSALLQVMNLRSDMSYVDQLNRNI 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ 116
+G + + +++ ++ D+++ +K + Q+ +Q
Sbjct: 67 EMGRTWLTASESALTNVEDLITEVKLLTVQMGSDNVGADERQAAAEAVQ 115
Score = 37.8 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 38/82 (46%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
N+ A+ + ++ +DT +IG R+ + + ++ A + + L D D
Sbjct: 198 NDGAAIRDQITNLDTAYDRIDGNISRIGGRGVRLDARTSILADVQLADTERLSSLEDVDY 257
Query: 416 ASESTRLSALQTQQQLAVQALS 437
A + L+A++T Q A+ A S
Sbjct: 258 AEAAVELAAVETAYQAALSAAS 279
>gi|323341351|ref|ZP_08081595.1| flagellin family protein [Lactobacillus ruminis ATCC 25644]
gi|323091228|gb|EFZ33856.1| flagellin family protein [Lactobacillus ruminis ATCC 25644]
Length = 300
Score = 59.0 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/130 (13%), Positives = 43/130 (33%), Gaps = 1/130 (0%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
L ++ ++++S V+ A+DN S + S+ + I
Sbjct: 7 LNNLATTTNKVQSTMNQLASLKEVNKASDNPLLVSKILDLNVSISQNSSYAMTISDAKDW 66
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVE-RGTDSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ M+ I+N I + + ++ ++LQ ++ + + N +
Sbjct: 67 TTTQDGALQLVEKSMNNIRNIIVSANNLGALTNDEFKAYRSELQQEIGTVVDAMNTNYDG 126
Query: 133 WLRTDLGSST 142
+T
Sbjct: 127 RYIFGGSKTT 136
>gi|300311359|ref|YP_003775451.1| flagellar hook-filament junction protein [Herbaspirillum
seropedicae SmR1]
gi|167731107|emb|CAP19666.1| N-terminus flagellar protein [Herbaspirillum seropedicae]
gi|300074144|gb|ADJ63543.1| flagellar hook-filament junction protein, N-terminus flagellin
protein [Herbaspirillum seropedicae SmR1]
Length = 377
Score = 59.0 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/198 (12%), Positives = 61/198 (30%), Gaps = 3/198 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S++ L + + +V++ RV +D+ + A M+
Sbjct: 3 ISTQMIYQSSNNDLTSMQSQFLKLSQQVTAQQRVLLPSDDPVAAARALDMQQTADLNEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+S + + + ++++ +K+ + + ++ SEI +++
Sbjct: 63 KTNRQNANSALSSVQGNLESMTNMLTKLKSNVITAGNASYSNAERINMASEIKGNLAEVL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
A G ++ G D G + + + + +
Sbjct: 123 GYANAQDGQGNYLFAGFKSTTQPFTLDGTGGVVYNGDQGAMSLQVDSTRVMDISASGQAI 182
Query: 181 TDGTERYGLLDRNHKIKV 198
G + N+ I V
Sbjct: 183 FQGNGQDIFKTMNNFINV 200
>gi|222053740|ref|YP_002536102.1| flagellar hook-associated protein 3 [Geobacter sp. FRC-32]
gi|221563029|gb|ACM19001.1| flagellar hook-associated protein 3 [Geobacter sp. FRC-32]
Length = 306
Score = 59.0 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 66/170 (38%), Gaps = 3/170 (1%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
+A +A L+ L+ +Q++++SG ++ +D+ M++ I
Sbjct: 7 MTADNALYNLQQGRSKLDQLQEQIASGSVINRPSDDPISTRQILAMQNGVTEGDQYLSNI 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLRDIAR 124
G+ ++I ++ +M+ +K + + TD + + +TQL++QL D+
Sbjct: 67 EKGNIWLNITNTALTGMSSIMAQVKTIASNMISTSTDANMIANATTNLTQLKNQLIDLGN 126
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
N + D ++ + G+ + +++ +
Sbjct: 127 TQIGNQYVFGGFDNSTAPFDASGVFSGTDDPMKVDIARNSSVAINITGGD 176
Score = 37.8 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 23/240 (9%), Positives = 58/240 (24%)
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
V ++ + I+ ++ A +K + A +
Sbjct: 56 VTEGDQYLSNIEKGNIWLNITNTALTGMSSIMAQVKTIASNMISTSTDANMIANATTNLT 115
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
G+ + + + N
Sbjct: 116 QLKNQLIDLGNTQIGNQYVFGGFDNSTAPFDASGVFSGTDDPMKVDIARNSSVAINITGG 175
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
T + + + +I + + + + V + A
Sbjct: 176 DLLRGGTPAVGAGSGATAGTRPADIIDSIDKLIAAITSSSAADIVDGVKNMKASADQIAA 235
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
A + R+ + I ++ ++ + + D A +T LS QT + A+ A +
Sbjct: 236 AQSTVAGNMMRLDNAKTMIVNNQNTLKNIISSKQNVDYAKAATELSQQQTAFEAALSATA 295
>gi|94995573|gb|ABF50698.1| flagellin [Borrelia lonestari]
Length = 135
Score = 59.0 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 31/91 (34%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
++ + ++ I+ I+ T +G+ +R+ + + ++
Sbjct: 45 QGGISSPINVTTAIDANASLTKIEDAIRMVTDQRANLGAFQNRLESVKASTDYAIENLKA 104
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQAL 436
++ DA M E + Q A+ +
Sbjct: 105 SYAQIKDAIMTDEIVASTTNSILTQSAMAMI 135
>gi|323967024|gb|EGB62450.1| flagellar hook protein 3 [Escherichia coli M863]
gi|327253482|gb|EGE65120.1| flagellar hook-associated protein 3 [Escherichia coli STEC_7v]
Length = 317
Score = 59.0 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/302 (11%), Positives = 89/302 (29%), Gaps = 6/302 (1%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A ++ S + A
Sbjct: 7 MMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLAR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIAR 124
+ KV + ++ +S+ + + KI D S+ ++I ++ QL ++A
Sbjct: 67 TFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGIRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ NG + + + + + + S
Sbjct: 127 TTDGNGRYIFAGYKTETAPFSEADGEYVGGAESIKQQVDASRSMVIGHTGDKIFDSITSN 186
Query: 185 ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKG 244
+ + + I + + + K+ A N+ +
Sbjct: 187 AVAEPDGSASETNLFAMLDSAIAALKTPVAESEADKETTAAALDKTNRGLKNSLNNVLTV 246
Query: 245 IATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYT 304
A + L + + S + ++ ++ ++ T +
Sbjct: 247 RAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTD 306
Query: 305 NS 306
Sbjct: 307 MQ 308
Score = 43.6 bits (100), Expect = 0.073, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 72/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGIRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEADGEYVGGAESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVAESEADKETTAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|205356372|ref|ZP_03223137.1| putative flagellin [Campylobacter jejuni subsp. jejuni CG8421]
gi|205345757|gb|EDZ32395.1| putative flagellin [Campylobacter jejuni subsp. jejuni CG8421]
Length = 750
Score = 59.0 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/217 (10%), Positives = 70/217 (32%), Gaps = 3/217 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + ++ L + +++SGL++ ++ ++A+ + ++ + L V
Sbjct: 3 ITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQV 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
++ + + + ++ K K+T T ++I E+ +++ +
Sbjct: 63 KESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A S + + + + + G + T Y + + +
Sbjct: 123 QLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINVVTGAGTESPYNIPGWDLFFKAD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI 217
D ++ + + D + S
Sbjct: 183 GDYKKQISTNVSFTDNRWDLNKDPDKTKYLTGDSKWQ 219
Score = 48.2 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 32/374 (8%), Positives = 86/374 (22%), Gaps = 11/374 (2%)
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSST 142
+ TI K T ++ + + G++ G ++
Sbjct: 379 TINNQQFTIDLKQTDFIKSKMTDTDGNAANGADYDNVYFEKNGNTVYGNVSQVIKGSNAY 438
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A+ + + D + + + + + N + +
Sbjct: 439 ATDSTKLSEVMAGDSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSYPDPNNPGQTISFPI 498
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ + T S + AA+ +
Sbjct: 499 MHTNPATGNSGVVTGSNDITYGQINDIIGMFAADKIPTTTIQANNGQINNADYTQIQQLM 558
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ + S+ S + + +
Sbjct: 559 KDSQATVDVSMDYKGRISVTDKLSSGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSF 618
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE------KLAMEEMVSFIDTQIKCAT 376
+ +S +D + ++ + M+ + +D +
Sbjct: 619 SANNSLTIDEPNVDIIKDLDSMIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVS 678
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
+G+ + I + V+ ++D D L +Q Q +++A
Sbjct: 679 KLNTTMGAYHNTIEGVNTRTSFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKA- 737
Query: 437 SIVNNSTARILSLF 450
++T LSL
Sbjct: 738 ----STTISQLSLL 747
>gi|261856353|ref|YP_003263636.1| flagellar hook-associated protein 3 [Halothiobacillus neapolitanus
c2]
gi|261836822|gb|ACX96589.1| flagellar hook-associated protein 3 [Halothiobacillus neapolitanus
c2]
Length = 313
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 51/136 (37%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T+ L+ + Q +++G+++++ A + +S A + N +
Sbjct: 3 VSTSMVFAQGLSNLQQQQSAMLQSQQEIATGVKLTNPAQDPVAFSTASDLSVLNSKQNQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
S I + K+ + ++ + ++ ++++ + S+ + QL + +A
Sbjct: 63 STNIDNATGKIQVQESTLGSITTMLQSVRDVAIQANNAAQNGMSLSALTDQLDQLQKALA 122
Query: 124 RGSSFNGENWLRTDLG 139
+ E G
Sbjct: 123 GQMNATDERGEYLFSG 138
Score = 39.3 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 39/126 (30%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ ++ V + T N + + ID
Sbjct: 175 DQQSVAINQPAGQIFQLSSSATTGGNASILQVIDQLKTAITTQPANLQTIYQNAQKDIDA 234
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ T A G +G+ + + ++ ++ + L D D+AS T+L+ Q
Sbjct: 235 VMNQVTDARGSMGNALNTLSTAKNDNAAQNVLTQQTLSGLRDTDVASAITKLNQSYLNLQ 294
Query: 431 LAVQAL 436
Q++
Sbjct: 295 ATQQSM 300
>gi|86153224|ref|ZP_01071428.1| flagellar hook-associated protein FlgL, putative [Campylobacter
jejuni subsp. jejuni HB93-13]
gi|85842950|gb|EAQ60161.1| flagellar hook-associated protein FlgL, putative [Campylobacter
jejuni subsp. jejuni HB93-13]
Length = 750
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/372 (7%), Positives = 100/372 (26%), Gaps = 5/372 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + ++ L + +++SGL++ ++ ++A+ + ++ + L V
Sbjct: 3 ITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQV 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
++ + + + ++ K K+T T ++I E+ +++ +
Sbjct: 63 KESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD--NGKVQITTIDYYLDPETVLLD 178
+A S + + + + + G + G + + D
Sbjct: 123 QLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINVVTGAGTESPYNIPGWDLFFKAD 182
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ +++ + K ++ + + + + A
Sbjct: 183 GDYKKQISTNVSFTDNRWDLTQNPDKTKYLTGDSKWQQLIGQGYVKDNSLDADKDFEYDD 242
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
T+ V ++ + + + + +
Sbjct: 243 SKLDFPPTTLYVQGTKPDGTSFKSAVLVKPEDTLEDVMENIGALYGNTPNNKVVEVSMND 302
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
S ++ + D++ +L I++
Sbjct: 303 SGQIQITDLKQGNNKLDFHAVAFTPQADTKDELKNIIEAANQEGISMNEVTNRVMQAATA 362
Query: 359 LAMEEMVSFIDT 370
++ ++
Sbjct: 363 APSNGDITKLNN 374
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 33/374 (8%), Positives = 86/374 (22%), Gaps = 11/374 (2%)
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSST 142
+ TI K T ++ + + G++ G ++
Sbjct: 379 TINNQQFTIDLKQTDFIKSKMTDTDGNAANGADYDNVYFEKNGNTVYGNVSQVIKGSNAY 438
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A+ + + D + + + + + L N + +
Sbjct: 439 ATDSTKLSEVMAGDSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSYLDPNNPGQTISFPI 498
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ + T S + AA+ +
Sbjct: 499 MHTNPATGNSGVVTGSNDITYGQINDIIGMFAADKIPTTTIQANNGQINNADYTQIQQLM 558
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ + S+ S + + +
Sbjct: 559 KDSQATVDVSMDYKGRISVTDKLSSGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSF 618
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE------KLAMEEMVSFIDTQIKCAT 376
+ +S +D + ++ + M+ + +D
Sbjct: 619 SANNSLTIDEPNVDIIKDLDSMIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVN 678
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
+G+ + I + V+ ++D D L +Q Q +++A
Sbjct: 679 KLNTTMGAYHNTIEGVNTRTSFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKA- 737
Query: 437 SIVNNSTARILSLF 450
++T LSL
Sbjct: 738 ----STTISQLSLL 747
>gi|284926121|gb|ADC28473.1| flagellar hook-associated protein FlgL [Campylobacter jejuni subsp.
jejuni IA3902]
Length = 750
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/217 (10%), Positives = 70/217 (32%), Gaps = 3/217 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + ++ L + +++SGL++ ++ ++A+ + ++ + L V
Sbjct: 3 ITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQV 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
++ + + + ++ K K+T T ++I E+ +++ +
Sbjct: 63 KESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A S + + + + + G + T Y + + +
Sbjct: 123 QLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINVVTGAGTESPYNIPGWDLFFKAD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI 217
D ++ + + D + S
Sbjct: 183 GDYKKQISTNVSFTDNRWDLNKDPDKTKYLTGDSKWQ 219
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 30/363 (8%), Positives = 84/363 (23%), Gaps = 11/363 (3%)
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
K T ++ + + G++ G ++ A+ + +
Sbjct: 390 KQTDFIKSKMTDTDGNAANGADYDNVYFEKNGNTVYGNVSQVIKGSNAYATDSTKLSEVM 449
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
D + + + + + N + ++ +
Sbjct: 450 AGDSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSYPDPNNPGQTISFPIMHTNPATGNSG 509
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
T S + AA+ + + + S+
Sbjct: 510 VVTGSNDITYGQINDIIGMFAADKIPTTTIQANNGQINNADYTQIQQLMKDSQATVDVSM 569
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
S + + + + +S
Sbjct: 570 DYKGRISVTDKLSSGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSLTIDEP 629
Query: 334 EIDSGYSMVTLNITRHANTDAYNE------KLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+D + ++ + M+ + +D + +G+ +
Sbjct: 630 NVDIIKDLDSMIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVSKLNTTMGAYHN 689
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
I + V+ ++D D L +Q Q +++A +I++ L
Sbjct: 690 TIEGVNTRTSFLSVNVQSIKSNVIDVDYGEAMINLMQVQLAYQASLKASTIISQ-----L 744
Query: 448 SLF 450
SL
Sbjct: 745 SLL 747
>gi|148926573|ref|ZP_01810255.1| putative flagellin [Campylobacter jejuni subsp. jejuni CG8486]
gi|145845267|gb|EDK22361.1| putative flagellin [Campylobacter jejuni subsp. jejuni CG8486]
Length = 750
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/217 (10%), Positives = 70/217 (32%), Gaps = 3/217 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + ++ L + +++SGL++ ++ ++A+ + ++ + L V
Sbjct: 3 ITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQV 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
++ + + + ++ K K+T T ++I E+ +++ +
Sbjct: 63 KESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A S + + + + + G + T Y + + +
Sbjct: 123 QLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINVVTGAGTESPYNIPGWDLFFKAD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI 217
D ++ + + D + S
Sbjct: 183 GDYKKQISTNVSFTDNRWDLNKDPDKTKYLTGDSKWQ 219
Score = 47.8 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 32/374 (8%), Positives = 86/374 (22%), Gaps = 11/374 (2%)
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSST 142
+ TI K T ++ + + G++ G ++
Sbjct: 379 TINNQQFTIDLKQTDFIKSKMTDTDGNAANGADYDNVYFEKNGNTVYGNVSQVIKGSNAY 438
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A+ + + D + + + + + N + +
Sbjct: 439 ATDSTKLSEVMAGDSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSYPDPNNPGQTISFPI 498
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ + T S + AA+ +
Sbjct: 499 MHTNPATGNSGVVTGSNDITYGQINDIIGMFAADKIPTTTIQANNGQINNADYTQIQQLM 558
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ + S+ S + + +
Sbjct: 559 KDSQATVDVSMDYKGRISVTDKLSSGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSF 618
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE------KLAMEEMVSFIDTQIKCAT 376
+ +S +D + ++ + M+ + +D +
Sbjct: 619 SANNSLTIDEPNVDIIKDLDSMIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVS 678
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
+G+ + I + V+ ++D D L +Q Q +++A
Sbjct: 679 KLNTTMGAYHNTIEGVNTRTSFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKA- 737
Query: 437 SIVNNSTARILSLF 450
++T LSL
Sbjct: 738 ----STTISQLSLL 747
>gi|88597597|ref|ZP_01100831.1| flagellin family protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|88190189|gb|EAQ94164.1| flagellin family protein [Campylobacter jejuni subsp. jejuni 84-25]
Length = 750
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/217 (10%), Positives = 70/217 (32%), Gaps = 3/217 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + ++ L + +++SGL++ ++ ++A+ + ++ + L V
Sbjct: 3 ITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQV 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
++ + + + ++ K K+T T ++I E+ +++ +
Sbjct: 63 KESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A S + + + + + G + T Y + + +
Sbjct: 123 QLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINVVTGAGTESPYNIPGWDLFFKAD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI 217
D ++ + + D + S
Sbjct: 183 GDYKKQISTNVSFTDNRWDLNKDPDKTKYLTGDSKWQ 219
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 29/363 (7%), Positives = 83/363 (22%), Gaps = 11/363 (3%)
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
K T ++ + + G++ G ++ A+ + +
Sbjct: 390 KQTDFIKSKMTDTDGNAANGADYDNVYFEKNGNTVYGNVSQVIKGSNAYATDSTKLSEVM 449
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
D + + + + + N + ++ +
Sbjct: 450 AGDSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSYPDPNNPGQTISFPIMHTNPATGNSG 509
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
T S + AA+ + + + S+
Sbjct: 510 VVTGSNDITYGQINDIIGMFAADKIPTTTIQANNGQINNADYTQIQQLMKDSQATVDVSM 569
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
S + + + + +S
Sbjct: 570 DYKGRISVTDKLSSGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSLTIDEP 629
Query: 334 EIDSGYSMVTLNITRHANTDAYNE------KLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+D + ++ + M+ + +D + +G+ +
Sbjct: 630 NVDIIKDLDSMIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVSKLNTTMGAYHN 689
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
I + ++ ++D D L +Q Q +++A ++T L
Sbjct: 690 TIEGVNTRTSFLSVNIQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKA-----STTISQL 744
Query: 448 SLF 450
SL
Sbjct: 745 SLL 747
>gi|86150218|ref|ZP_01068445.1| flagellin family protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|218562507|ref|YP_002344286.1| lagellar hook-associated protein FlgL [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|85839334|gb|EAQ56596.1| flagellin family protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|112360213|emb|CAL35008.1| putative flagellin [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|315929505|gb|EFV08699.1| putative flagellin [Campylobacter jejuni subsp. jejuni 305]
Length = 750
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/217 (10%), Positives = 70/217 (32%), Gaps = 3/217 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + ++ L + +++SGL++ ++ ++A+ + ++ + L V
Sbjct: 3 ITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQV 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
++ + + + ++ K K+T T ++I E+ +++ +
Sbjct: 63 KESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A S + + + + + G + T Y + + +
Sbjct: 123 QLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINVVTGAGTESPYNIPGWDLFFKAD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI 217
D ++ + + D + S
Sbjct: 183 GDYKKQISTNVSFTDNRWDLNKDPDKTKYLTGDSKWQ 219
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 30/363 (8%), Positives = 83/363 (22%), Gaps = 11/363 (3%)
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
K T ++ + + G++ G ++ A+ + +
Sbjct: 390 KQTDFIKSKMTDTDGNAANGADYDNVYFEKNGNTVYGNVSQVIKGSNAYATDSTKLSEVM 449
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
D + + + + + N + ++ +
Sbjct: 450 AGDSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSYPDPNNPGQTISFPIMHTNPATGNSG 509
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
T S + AA+ + + + S+
Sbjct: 510 VVTGSNDITYGQINDIIGMFAADKIPTTTIQANNGQINNADYTQIQQLMKDSQATVDVSM 569
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
S + + + + +S
Sbjct: 570 DYKGRISVTDKLSSGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSLTIDEP 629
Query: 334 EIDSGYSMVTLNITRHANTDAYNE------KLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+D + ++ + M+ + +D + +G+ +
Sbjct: 630 NVDIIKDLDSMIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVSKLNTTMGAYHN 689
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
I + V+ ++D D L +Q Q +++A ++T L
Sbjct: 690 TIEGVNTRTSFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKA-----STTISQL 744
Query: 448 SLF 450
SL
Sbjct: 745 SLL 747
>gi|237731014|ref|ZP_04561495.1| flagellar hook-associated protein FlgL [Citrobacter sp. 30_2]
gi|226906553|gb|EEH92471.1| flagellar hook-associated protein FlgL [Citrobacter sp. 30_2]
Length = 317
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 50/175 (28%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + +++S+G RV + +D+ S A ++ S
Sbjct: 3 ISTQMMYQQNMRGITNSQAEWMKFGEQMSTGKRVINPSDDPIAASQAVVLSQAQAQNSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ A + KV + + +S+ + + KI S T LQ +
Sbjct: 63 TLARSFATQKVSLEENVLSQVTTAIQAAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
++ N G T S + V D
Sbjct: 123 NLANSTDGNGRYIFGGYKTESAPFAQADGAYSGGTTNVTQQVDASRTMVIGHTGD 177
>gi|57237716|ref|YP_178964.1| flagellar hook-associated protein [Campylobacter jejuni RM1221]
gi|57166520|gb|AAW35299.1| flagellin family protein [Campylobacter jejuni RM1221]
gi|315058327|gb|ADT72656.1| Flagellar hook-associated protein flgL [Campylobacter jejuni subsp.
jejuni S3]
Length = 750
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/217 (10%), Positives = 70/217 (32%), Gaps = 3/217 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + ++ L + +++SGL++ ++ ++A+ + ++ + L V
Sbjct: 3 ITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQV 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
++ + + + ++ K K+T T ++I E+ +++ +
Sbjct: 63 KESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A S + + + + + G + T Y + + +
Sbjct: 123 QLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINVVTGAGTESPYNIPGWDLFFKAD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI 217
D ++ + + D + S
Sbjct: 183 GDYKKQISTNVSFTDNRWDLNKDPDKTKYLTGDSKWQ 219
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 32/374 (8%), Positives = 87/374 (23%), Gaps = 11/374 (2%)
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSST 142
+ TI K T ++ + + G++ G ++
Sbjct: 379 TINNQQFTIDLKQTDFIKSKMTDTDGNATNGADYDNVYFEKNGNTVYGNVSQVIKGNNAY 438
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A+ + + D + + + + + N + +
Sbjct: 439 ATDSTKLSEVMAGDSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSYPDPNNPGQTISFPI 498
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ + T S + AA+ + +
Sbjct: 499 MHTNPATGNSGVVTGSNDITYGQINDIIGMFAADKIPTTTIQVNNGQINNADYTQIQQLM 558
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ + S+ S + + +
Sbjct: 559 KDSQATVDVSMDYKGRISVTDKLSSGTNIEISLSDSQSGQFPAPPFTITSTVQNGPNFSF 618
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE------KLAMEEMVSFIDTQIKCAT 376
+ +S +D + ++ + M+ + +D +
Sbjct: 619 SANNSLTIDEPNVDIIKDLDSMIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVS 678
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
+G+ + I + V+ ++D D L +Q Q +++A
Sbjct: 679 KLNTTMGAYHNTIEGVNTRTSFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKA- 737
Query: 437 SIVNNSTARILSLF 450
++T LSL
Sbjct: 738 ----STTISQLSLL 747
>gi|121612548|ref|YP_001000562.1| flagellin family protein [Campylobacter jejuni subsp. jejuni
81-176]
gi|167005495|ref|ZP_02271253.1| flagellar hook-associated protein FlgL [Campylobacter jejuni subsp.
jejuni 81-176]
gi|87249343|gb|EAQ72303.1| flagellin family protein [Campylobacter jejuni subsp. jejuni
81-176]
Length = 750
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/217 (10%), Positives = 70/217 (32%), Gaps = 3/217 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + ++ L + +++SGL++ ++ ++A+ + ++ + L V
Sbjct: 3 ITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQV 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLR 120
++ + + + ++ K K+T T ++I E+ +++ +
Sbjct: 63 KESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A S + + + + + G + T Y + + +
Sbjct: 123 QLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINVVTGAGTESPYNIPGWDLFFKAD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI 217
D ++ + + D + S
Sbjct: 183 GDYKKQISTNVSFTDNRWDLTQNPDKTKYLTGDSKWQ 219
Score = 47.0 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 30/363 (8%), Positives = 83/363 (22%), Gaps = 11/363 (3%)
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
K T ++ + + G++ G ++ A+ + +
Sbjct: 390 KQTDFIKSKMTDTDGNAANGADYDNVYFEKNGNTVYGNVSQVIKGSNAYATDSTKLSEVM 449
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
D + + + + + N + ++ +
Sbjct: 450 AGDSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSYPDPNNPGQTISFPIMHTNPATGNSG 509
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
T S + AA+ + + + S+
Sbjct: 510 VVTGSNDITYGQINDIIGMFAADKIPTTTIQANNGQINNADYTQIQQLMKDSQATVDVSM 569
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
S + + + + +S
Sbjct: 570 DYKGRISVTDKLSSGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSLTIDEP 629
Query: 334 EIDSGYSMVTLNITRHANTDAYNE------KLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+D + ++ + M+ + +D + +G+ +
Sbjct: 630 NVDIIKDLDSMIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVSKLNTTMGAYHN 689
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
I + V+ ++D D L +Q Q +++A ++T L
Sbjct: 690 TIEGVNTRTSFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKA-----STTISQL 744
Query: 448 SLF 450
SL
Sbjct: 745 SLL 747
>gi|320179216|gb|EFW54174.1| Flagellar hook-associated protein FlgL [Shigella boydii ATCC 9905]
Length = 317
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 54/147 (36%), Gaps = 3/147 (2%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
T + + + +++S+G RV + +D+ S A ++ S +
Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRD 121
A + KV + ++ +S+ + + KI D S+ ++I L+ QL +
Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLPTDIQGLRDQLLN 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKS 148
+A + NG + +
Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEAN 150
Score = 43.6 bits (100), Expect = 0.074, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 73/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLPTDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G+ + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|323976544|gb|EGB71632.1| flagellar hook protein 3 [Escherichia coli TW10509]
Length = 317
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 55/143 (38%), Gaps = 6/143 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++S+G RV + +D+ S A ++ S + A
Sbjct: 7 MMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLAR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIAR 124
+ KV + ++ +S+ + + KI D S+ ++I ++ QL ++A
Sbjct: 67 TFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGIRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASIAK 147
+ NG +
Sbjct: 127 TTDGNGRYIFAGYKTETAPFSEA 149
Score = 42.8 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 72/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGIRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEADGEYVGGAESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVAESEADKETAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|51895613|gb|AAU13838.1| flagellin A subunit [Helicobacter pylori]
Length = 410
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 52/163 (31%), Gaps = 3/163 (1%)
Query: 49 IAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDS 105
+A ++S +L G + +A M + + ++ T+K K T +
Sbjct: 1 VADSLRSQASSLGQAIANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESR 60
Query: 106 KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT 165
K+IQS+I +L L +I +++NG+ L + + S
Sbjct: 61 KAIQSDIVRLIQGLDNIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKI 120
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ ++ S + N +V
Sbjct: 121 GQVRIATGALITASGDISLTFKQVDGVNDVTLESVKVSSSAGT 163
>gi|167585201|ref|ZP_02377589.1| flagellar hook-associated protein FlgL [Burkholderia ubonensis Bu]
Length = 413
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/366 (10%), Positives = 87/366 (23%), Gaps = 4/366 (1%)
Query: 32 SSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTI 91
SSG+ ++ ADN + A + + LS + + + + DV++ I
Sbjct: 31 SSGVSLTTPADNPVGAAQAVQLSMTSATLSQYTSNQNAALASLQAEDHALGSVNDVLTNI 90
Query: 92 KNKIT---AGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKS 148
+ + G +D ++ ++I + QL IA G S K+
Sbjct: 91 QTTLVRAGDGSLSDSDRSALATQIQSARDQLLTIANSDDGAGNYLFAGFKNGSQPFTNKA 150
Query: 149 VIGSFIRDDNGKVQITTIDYYLDP-ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
G D G + D
Sbjct: 151 GGGVNYVGDTGTRNVQIADSRTLSQGDNGAAVFMSVPTFGSQPVPAGSASNTGTGTISPV 210
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
++ T + + + L T +P A A T
Sbjct: 211 TVTSPSAATNNHQFAIAFSGPAGALTYTVTDNTVVPPSTTAALPYTAGAAISLGGGMTVA 270
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
+ + + +V + +
Sbjct: 271 VSGAPANGDSFTVSPAPQAPGGADVFSTLDSIVAALKTPSVNNPVAMATLKNAMTAGATK 330
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+ + + + + V A + +++ + D + + + +
Sbjct: 331 LGNTMRNVTTIQADVGGREQEIKAMQAVTQTNSLQVSSNLADLTSTNIVSTISQFTQLQN 390
Query: 388 RIHLQE 393
+ +
Sbjct: 391 ALTGAQ 396
>gi|116626182|ref|YP_828338.1| flagellar hook-associated protein 3 [Candidatus Solibacter usitatus
Ellin6076]
gi|116229344|gb|ABJ88053.1| flagellar hook-associated protein 3 [Candidatus Solibacter usitatus
Ellin6076]
Length = 306
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
N S+ + + + +++ +VSSG RV+ A+D+ +K+ + +
Sbjct: 4 NLNQSSEAFLANIARVQRSVDEASRQVSSGKRVNVASDDPGNIDTIMQLKTGDTHNQQIQ 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRD 121
+ + ++ + A ++ A +M + T G +S+ +E+ L Q+
Sbjct: 64 SNLAVVATDANAADTALTSATKLMDRARTLATQGSNFTMDAGGRQSMAAEVQSLLEQMVS 123
Query: 122 IARG 125
I+R
Sbjct: 124 ISRT 127
>gi|302343764|ref|YP_003808293.1| hypothetical protein Deba_2337 [Desulfarculus baarsii DSM 2075]
gi|301640377|gb|ADK85699.1| hypothetical protein Deba_2337 [Desulfarculus baarsii DSM 2075]
Length = 606
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/356 (8%), Positives = 78/356 (21%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
++S +L I L + ++ ++G +S +D Q L + +
Sbjct: 11 TSSAQLMRIQTELSRLNNQAATGDIISKPSDAPVSSITVQSATVQLQELDQYAIDLEHAK 70
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
S + A + S+ ++ DS + Q ++Q + DI +
Sbjct: 71 SWLSQATSDFSQLDSLIQQALTLAEQMSTGTMDSSNRQVAAEKVQGLIGDIILICNNEIS 130
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
+ S S + T + Y + L S +
Sbjct: 131 GSHIYAGTRTDQSAVSSSLKVDDIATPASGNTGTGNIYAFGDYSGLMSRDITITADATVA 190
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
++ + +V A + + +
Sbjct: 191 NRFQVSYVDDFGRQRTNTVDLAGEGVGNAVEICDGVMIYIDSGSFTPGESYTLGVGRQQG 250
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ +T G+ +
Sbjct: 251 NTSDLLVNLSTDNRMDYNYTVDQFLGAEGNSGDGWTNLLDILSQWSYYLERDGQDHDYYE 310
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
D ++ + + + ++ DA + +
Sbjct: 311 AMPGVGNDPTNSGAFQVSGDWDTLSARQYEFNVGGPITSDADAADRAHFSNFTIDA 366
Score = 40.1 bits (91), Expect = 0.69, Method: Composition-based stats.
Identities = 22/296 (7%), Positives = 60/296 (20%), Gaps = 3/296 (1%)
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ + L + +
Sbjct: 303 GQDHDYYEAMPGVGNDPTNSGAFQVSGDWDTLSARQYEFNVGGPITSDADAADRAHFSNF 362
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
ID S + GA+ T+ +
Sbjct: 363 TIDASWGGGVPSADNPMIVNYEYDGAYGGMPAGTYQVTITDVGDDASFALVEGGVEISLA 422
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
++ T + + T + + +
Sbjct: 423 DCAYENTGQTWQITSSFQDGQTPSPSNPMEVTYTYLDDSGVRRMGTLTFDGTGSTNAANL 482
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
S + + + + + +EM+ + T + G+
Sbjct: 483 EPSGSGVSLTLSEDGAFALGDRFDLTLEQYNQGQTKSQEMLETLKTSLTTVLQCEADAGA 542
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL---AVQALS 437
+R+ ++ F + ++ + L D+A+ + + Q A +S
Sbjct: 543 KLNRLEVRYSFFEEDVLRLDDRLQALNGVDIATVTAEWQLQKIMYQAALKATAMVS 598
>gi|332089153|gb|EGI94262.1| flagellar hook-associated protein 3 [Shigella boydii 5216-82]
Length = 317
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 53/147 (36%), Gaps = 3/147 (2%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
T + + + +++S+G RV + +D+ S A ++ S +
Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
A + KV + ++ +S+ + + KI D S+ ++I L+ Q +
Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQFLN 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKS 148
+A + NG + +
Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEAN 150
Score = 42.8 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 73/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G+ + + S T K+
Sbjct: 121 FLNLANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|305432071|ref|ZP_07401238.1| flagellin family protein [Campylobacter coli JV20]
gi|304445155|gb|EFM37801.1| flagellin family protein [Campylobacter coli JV20]
Length = 754
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 71/218 (32%), Gaps = 13/218 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI T+ A +L + ++SSG+++ ++ ++A+ + ++ + L
Sbjct: 12 SISTSMGA----------QSSLYQISQQLSSGIKIQNSYEDASVYIDNTRLEYELKTLEQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQL 119
V A + + + ++ K K+T T ++I E+ +++ +
Sbjct: 62 VKQATNSAKEMTQNSMKALQDMVKLLGDFKVKVTQAASDSNSQTSREAIAKELERIKESI 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+A S + + + + + G + T Y + + +
Sbjct: 122 VQLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINVVTGARTESPYNIPGWDLFFKA 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI 217
D ++ + + D + S
Sbjct: 182 DGDYKKQISTNVSFTDNRWDLNKDPDKTKYLTGDSKWQ 219
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 39/354 (11%), Positives = 100/354 (28%), Gaps = 5/354 (1%)
Query: 97 AGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRD 156
+ + + + ++ + + + + + + +++ + + D
Sbjct: 403 SKMTDTDGNATNGADYDNVYFEKNGNTVYGNVSQVIKGSNAYATDSTKLSEVMARDSLND 462
Query: 157 DNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGT 216
+++ + + L +ST + I + V T
Sbjct: 463 TTLNLKVNSKGGNSYDVAINLQTSTVSYLDNLGQTISFPIMHTNPATGNSGVVTGSNDIT 522
Query: 217 ISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAAS 276
+ + + + + + T S ++ +
Sbjct: 523 YGQINDIIGMFAADKIPTTTIQANNGQINNADYTQIQQLMKDSQATVDVSMDYKGRISVT 582
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
N +I + + + P T STV N + + T + D+ K++D
Sbjct: 583 DKLSSGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSLTIDEPNVDIIKDLD 642
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
S V R + M+ + +D + +G+ + I
Sbjct: 643 SMIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVSKLNTTMGAYHNTIEGVNTRT 702
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ V+ ++D D L Q Q +++A ++T LSL
Sbjct: 703 SFLSVNVQSIKSNVIDVDYGEAMMNLMQTQLAYQASLKA-----STTISQLSLL 751
>gi|157146219|ref|YP_001453538.1| flagellar hook-associated protein FlgL [Citrobacter koseri ATCC
BAA-895]
gi|157083424|gb|ABV13102.1| hypothetical protein CKO_01976 [Citrobacter koseri ATCC BAA-895]
Length = 317
Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/197 (12%), Positives = 54/197 (27%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + +++S+G RV + +D+ S A ++ S
Sbjct: 3 ISTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVINPSDDPIAASQAIVLAQAQAQNSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ A + KV + + +S+ + T + KI S + LQ +
Sbjct: 63 ALARTFATQKVSLEENVLSQVTAAIQTAQEKIVYAANGTLSDDDRASLASDLQGIRDQLM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N G T + D +
Sbjct: 123 NLANSTDGNGRYIFAGYKTEKAPFDQANGDYSGGTENITQQVDASRTMVIGHTGDQIFNR 182
Query: 184 TERYGLLDRNHKIKVEP 200
+ + ++
Sbjct: 183 ITSNAVPEPDNSASETS 199
Score = 39.7 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 28/319 (8%), Positives = 72/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRISTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVINPSDDPIAASQAIVLAQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + A ++
Sbjct: 61 QYALARTFATQKVSLEENVLSQVTAAIQTAQEKIVYAANGTLSDDDRASLASDLQGIRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G+ T+ S T ++
Sbjct: 121 LMNLANSTDGNGRYIFAGYKTEKAPFDQANGDYSGGTENITQQVDASRTMVIGHTGDQIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
N + + + + A+++ + +
Sbjct: 181 NRITSNAVPEPDNSASETSLFAMLDTAIAALKTPVADDDVKKAEAAAAIDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ S + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLSELDSLDSLGSERALGQAQQMSDLVDVDWNAAISSY----VMQQAA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA + +SLF+
Sbjct: 297 LQASYKAFSDMQG-MSLFQ 314
>gi|282599763|ref|ZP_05971779.2| flagellar hook-associated protein 3 [Providencia rustigianii DSM
4541]
gi|282567727|gb|EFB73262.1| flagellar hook-associated protein 3 [Providencia rustigianii DSM
4541]
Length = 305
Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 48/169 (28%), Gaps = 4/169 (2%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
Q + +++SG RV+ +D+ S A + + G +
Sbjct: 7 LQDMNGAQSRWMDAGSQLASGKRVNKPSDDPQASSQAVRINQSESRNQQYVTSRGFAKTG 66
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVE----RGTDSKSIQSEITQLQSQLRDIARGSSFN 129
+ + + +S+ +V + I I D S+ ++T L+ QL + + N
Sbjct: 67 MTLQMSILSQMTEVTTQIDTTIIQASNQGALSDKDRTSLAEQLTGLKEQLVGLGNTTDGN 126
Query: 130 GENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
G + + + +
Sbjct: 127 GRYIFAGFKSDKAPFEIDTNGEVLYKGGDKPIMQNVASDREMTTYFTGA 175
>gi|149188073|ref|ZP_01866368.1| flagellar hook-associated protein L [Vibrio shilonii AK1]
gi|148838061|gb|EDL55003.1| flagellar hook-associated protein L [Vibrio shilonii AK1]
Length = 397
Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/433 (9%), Positives = 107/433 (24%), Gaps = 52/433 (12%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I + H+ + +R + +++SG ++ AD+ Q +K L
Sbjct: 2 MNRISSFHNYQTVQNDMRRQENKIHENHAQLASGKQLQKPADSPLATHYLQKLKQQTQQL 61
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
AI L ++++ + + + K + + +++ ++
Sbjct: 62 DQYDSAITLSRNRLEHQEVMLGETEQFADNAKRLTMQAINGALSPEDREAKAR----EIE 117
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++A+ F R + G+ + + K F D G++
Sbjct: 118 ELAKN--FLALANTRDESGNYSFAGTKPKTQPFFVDGEGRISY----------------- 158
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ S KL L A +
Sbjct: 159 ------------------AGDDYQRKMRIAASLEVATSDPGSKLFMEIDNPLGDYKANYQ 200
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
KG + + A N+T + + + I
Sbjct: 201 LQKGSELLLEKATNSNANDNSTYKVTFVDMGNQQFGYQLEQNNTVVAAGNFDPSQGIQFQ 260
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ ++ + T + +
Sbjct: 261 GLNIQTKGQITPGDAIEIEPQKTFSVFDTFNDAVYWMDNDVA-----------DASASAQ 309
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ ++ T++ +G + + +Q+ + + ++ + D D +
Sbjct: 310 LHQVTEQFHAAFLHLTSSRTDVGVRLNSLDIQQSQHEDFKISLARSKSNFEDLDYSKAVI 369
Query: 421 RLSALQTQQQLAV 433
Q +
Sbjct: 370 DFEENSRALQASQ 382
>gi|320353946|ref|YP_004195285.1| flagellar hook-associated protein 3 [Desulfobulbus propionicus DSM
2032]
gi|320122448|gb|ADW17994.1| flagellar hook-associated protein 3 [Desulfobulbus propionicus DSM
2032]
Length = 292
Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 58/199 (29%), Gaps = 7/199 (3%)
Query: 12 SASQKLRDINYNLEVVQDRV----SSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
+A + L+ + + + S+G V+ A+DN + +SD +
Sbjct: 8 TAYRSLQTNLGKTSTILNELYVTSSTGTAVAKASDNPSSVGSILGCRSDIVKGERYVENC 67
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
+ A+ + +M+ K AG D ++ EI+QL +L D+A
Sbjct: 68 KHVQDSLANAEISIDSIEGLMTRAKEIAVAGANDSLSTADKATLADEISQLYQELLDLAN 127
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + + S + ++ T L S +
Sbjct: 128 TQISGKYIFAGYNDQTVPFSGSPVTYNGTGDQQMIEISPGTTVAKNITGDDLFMSPINLF 187
Query: 185 ERYGLLDRNHKIKVEPQVL 203
L V
Sbjct: 188 TTLEDLQTALTSGSSADVS 206
Score = 43.6 bits (100), Expect = 0.064, Method: Composition-based stats.
Identities = 17/200 (8%), Positives = 59/200 (29%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + A + +T + + S + + P
Sbjct: 88 MTRAKEIAVAGANDSLSTADKATLADEISQLYQELLDLANTQISGKYIFAGYNDQTVPFS 147
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ ++ T ++ ++ + + +
Sbjct: 148 GSPVTYNGTGDQQMIEISPGTTVAKNITGDDLFMSPINLFTTLEDLQTALTSGSSADVSA 207
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
M++ ++ + A +G+ S+R+ + ++ + R DAD+ ++
Sbjct: 208 MLTPLEAAAEQVRAQQSALGNTSARMDDMISMHENALLLLKTTLSRHQDADLTEVLAEIA 267
Query: 424 ALQTQQQLAVQALSIVNNST 443
++T + +Q + V++ +
Sbjct: 268 KMETSLEATMQVTARVSSLS 287
>gi|188996941|ref|YP_001931192.1| flagellar hook-associated protein 3 [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932008|gb|ACD66638.1| flagellar hook-associated protein 3 [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 313
Score = 58.2 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/206 (9%), Positives = 61/206 (29%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
+E ++++G ++ +D+ + +K+ N + + S+ +D A++
Sbjct: 20 QNEIEKYSKQIATGKKLLSPSDDTVATVASLRLKTINQNIDTYLRNMDFVSNVLDQAEST 79
Query: 81 MSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGS 140
+S ++ +I + G K + ++D + R G
Sbjct: 80 LSNISKAGQELRVEIIRLLNTGVLDKEDAKVLRDYFVNMKDYIIKQANYSIGDTRIFGGV 139
Query: 141 STASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
+ + + G++ + L+ + ++ K+
Sbjct: 140 KSQTDPFAPDGTYQGETTETKVPVAPGVELNTTFNGKVYLGVNNDSNKMIMAEAIDKIVS 199
Query: 201 QVLKDIDVSVYDASGTISTKKFKLAT 226
+ I + +T
Sbjct: 200 IIDNAIAGTGSLGDLNTATISVNGQN 225
Score = 44.3 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 32/100 (32%), Gaps = 5/100 (5%)
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
NT + +++ D + IG+ I+ + + + + L
Sbjct: 215 NTATISVNGQNLKILEAFDVGLNNVLQYTSIIGTQVKIINDLKSGFEKNKVFNNNLISNL 274
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
D D A T L QT Q + N + LSL
Sbjct: 275 QDVDTAEAITNLQKAQTAYQALIATY---NQNRQ--LSLL 309
>gi|158604969|gb|ABW74784.1| flagellar hook-associated protein [Campylobacter concisus 13826]
Length = 771
Score = 58.2 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/349 (12%), Positives = 92/349 (26%), Gaps = 8/349 (2%)
Query: 6 TNHSAMSASQKLRDINYNL---EVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
TN + SQ L D N+ ++S+GL++ D D AA ++ A + + L+
Sbjct: 4 TNQ--LRFSQTLHDYQKNMVGVNKSYQQLSNGLKIQDPYDGAAVYNDAMRLDYEATTLTQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ---SQL 119
V+DA G + + + + K K+ + S+++ LQ + L
Sbjct: 62 VADATGKSVNFAKNTDNALKEFEKQLENFKTKVVQAASDVHSTTSLEALANDLQGIKNHL 121
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+IA S + + + + + G+ + Y + + L
Sbjct: 122 VNIANTSINGQFLFSGSAVDTKPIDGSGKYQGNRDYMKTSAGAQVELPYNIPGFDLFLGK 181
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
D + + + + + G+
Sbjct: 182 DGDYNKILTTNVMLADQTRTDIAYAPKYLDENSKIKNMIGLNYASDSVVGSDGSYKGTIE 241
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
+ T V P + + SA G + T
Sbjct: 242 PDFDFLDTSNVNFPDTYFFMQGKKPDGTTFTSKFKMSADTSMAGLMEKIGMEFGNTKTTK 301
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR 348
+ + + ++ + G +
Sbjct: 302 VVDVSINNDGQFNIKDLTKGNQTIDFHMVAATSVAANRGAIAPNNTLDT 350
Score = 50.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/355 (10%), Positives = 98/355 (27%), Gaps = 14/355 (3%)
Query: 96 TAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR 155
+G + + ++ + +L +I + + I +
Sbjct: 427 VSGTKESYNRNLYPKDVDARKRELYNIDNQEIGLQVK---------SITGTMYDIKVKMG 477
Query: 156 DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASG 215
+ G ++ + + T +++ + + + A+
Sbjct: 478 EAGGVNTPVQFQITSTTAAGVVSPTRNLTVYNSDEFGSYRTYASDFTYRQLMDIIAMAAS 537
Query: 216 TISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAA 275
+ + A G + +
Sbjct: 538 DNIPDPQNVENANFDTDIEKVRRDQNYNAYKEALSKTKGAVEVNLDDKGRMVLTDKTKSV 597
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
+ + M ++ ++ + G + K + + T + + +++
Sbjct: 598 TNIELTMYDAKNGDIFDGDSTGMNTAGAASHPQGKGSVFSFNENNALTIDEPSTSVFQDL 657
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
D V R + M+ + +D + A KIGS + + ++
Sbjct: 658 DDMIFAVRNGYYRADANNHDPRNTGMQGALKRLDHLVDHANKELTKIGSQTKLLTSTKER 717
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
++M+ V ++DAD A + + L Q +QA + +N LSL
Sbjct: 718 AEIMKVNVLTVKNDVIDADYAESYLKFTQLSLSYQATLQASAKINQ-----LSLL 767
>gi|331006959|ref|ZP_08330203.1| flagellin FliC [gamma proteobacterium IMCC1989]
gi|330419231|gb|EGG93653.1| flagellin FliC [gamma proteobacterium IMCC1989]
Length = 57
Score = 58.2 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
+ + + R++DAD A+E+ LS Q Q + L+ N + ++L L +G
Sbjct: 1 MANVSENASAARSRIMDADFAAETAALSRAQVLSQASQAMLAQANAAPQQVLQLLQG 57
>gi|300902474|ref|ZP_07120456.1| flagellar hook-associated protein 3 [Escherichia coli MS 84-1]
gi|301304978|ref|ZP_07211080.1| flagellar hook-associated protein 3 [Escherichia coli MS 124-1]
gi|300405506|gb|EFJ89044.1| flagellar hook-associated protein 3 [Escherichia coli MS 84-1]
gi|300839696|gb|EFK67456.1| flagellar hook-associated protein 3 [Escherichia coli MS 124-1]
gi|315253884|gb|EFU33852.1| flagellar hook-associated protein 3 [Escherichia coli MS 85-1]
Length = 317
Score = 58.2 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 53/147 (36%), Gaps = 3/147 (2%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
T + + + +++S+G RV + +D+ S A ++ S +
Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
A + KV + ++ +S+ + + KI D S+ ++I + QL +
Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGFRDQLLN 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKS 148
+A + NG + +
Sbjct: 124 LANTTDGNGRYIFAGYKTETAPFSEAN 150
Score = 42.4 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 73/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGFRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G+ + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|255022061|ref|ZP_05294067.1| Flagellar hook-associated protein flgL [Acidithiobacillus caldus
ATCC 51756]
gi|254968547|gb|EET26103.1| Flagellar hook-associated protein flgL [Acidithiobacillus caldus
ATCC 51756]
Length = 413
Score = 58.2 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 57/434 (13%), Positives = 124/434 (28%), Gaps = 39/434 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T S + + + L + ++++GL V ADN A + + + ALS
Sbjct: 6 ISTPVSYLIPTNAILQDQSQLTTLDRQLATGLAVDSPADNPAAAAQSLQIGQQLSALSLD 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
G+G S + + + ++ +++ A T+ + Q+ +Q
Sbjct: 66 GTTAGIGQSDLQNLSSTIGSISTLVQSLRQTALAAANATTNGQDRQALADSVQE------ 119
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ S +G T E +
Sbjct: 120 --------------QLQQLLQLGNSQTPDGNYLLSGSQSNTQPFLDSGSEVTYQGDAGTN 165
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
T + +L DI A S+ AT S + A +
Sbjct: 166 TLQIAPGLTIPTSLSGQFLLMDIPTGNGYAVVNASSGNQGTATISVGGVTDPAAAAEMDA 225
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
V A + +S + S +V S Y + D+
Sbjct: 226 NHQKYSVTFSVATSGVAQSSYAITNASGTVVGSGVYTPGTSIDVA--------------- 270
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
++ + +S ++D + + L+ + M
Sbjct: 271 ----GSEFTINGNPANGDSFSIDPARQQSLFQTVQSMLTLLSTGVSNGAAGAQYEQGMSN 326
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+++ ++ + +GS ++I + + L+ A++ + +T+ +
Sbjct: 327 VIANLNQGLTRLLTGQAAVGSSLAQIQAITQVNETESSNDQIAQSSLISANLPAVATQFA 386
Query: 424 ALQTQQQLAVQALS 437
Q A+ A S
Sbjct: 387 QGSASLQAALSAFS 400
>gi|293395590|ref|ZP_06639873.1| flagellar hook-associated protein 3 [Serratia odorifera DSM 4582]
gi|291421909|gb|EFE95155.1| flagellar hook-associated protein 3 [Serratia odorifera DSM 4582]
Length = 321
Score = 57.8 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/199 (12%), Positives = 55/199 (27%), Gaps = 3/199 (1%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
T+ L D ++SSG +V +D+ S A ++ +
Sbjct: 4 STSMMYQQNMSGLTDNQSLWMKSAQQLSSGKKVLTPSDDPLAASQAIMVSQAQAENGQYA 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQSEITQLQSQLRD 121
A V + + +S + +K I D S+ +++ ++ QL
Sbjct: 64 LARTFARQSVSMEETVLSNVTSGIKDMKALIVNAGDGTLSDNDRASLATQLQGMKDQLLS 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
A + NG + ++ + + ++ D+
Sbjct: 124 QANSTDGNGRYMFAGFKNDQPPFVQQADGSIRYQGGSTPIEQKVDANRTMTVGHTGDAIF 183
Query: 182 DGTERYGLLDRNHKIKVEP 200
+ + V
Sbjct: 184 MTLTSNPKPEPDGSAPVAN 202
Score = 37.4 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 25/73 (34%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A+++ +D + ++G+ + + K + + LVD DM
Sbjct: 232 ALDKANRGLDNSYNNVLSVRAELGTQLQEMDTLDSIGKDRDMTNQAQLSALVDVDMVEAI 291
Query: 420 TRLSALQTQQQLA 432
+ Q Q +
Sbjct: 292 SSYFMQQAALQAS 304
>gi|57167903|ref|ZP_00367043.1| probable flagellin Cj0887c [Campylobacter coli RM2228]
gi|57021025|gb|EAL57689.1| probable flagellin Cj0887c [Campylobacter coli RM2228]
Length = 734
Score = 57.8 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/356 (7%), Positives = 96/356 (26%), Gaps = 5/356 (1%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
+L + ++SSG+++ ++ ++A+ + ++ + L V A +
Sbjct: 3 AQSSLYQISQQLSSGIKIQNSYEDASVYIDNTRLEYELKTLEQVKQATNSAKEMTQNSMK 62
Query: 80 GMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRT 136
+ + ++ K K+T T ++I E+ +++ + +A S + +
Sbjct: 63 ALQDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIVQLANTSVNGQYLFAGS 122
Query: 137 DLGSSTASIAKSVIGSFIRDD--NGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+ + + G + G + + D + ++
Sbjct: 123 QVANKPFDSNGNYYGDKNNINVVTGAGTESPYNIPGWDLFFKADGDYKKQISTNVSFADN 182
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ + K ++ + + + + A T+ V
Sbjct: 183 RWDLNKDPDKTKYLTGDSKWQQLIGQGYVKDNSLDADKDFEYDDSKLDFPPTTLYVQGTR 242
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
++ + + + + + S
Sbjct: 243 PDGTSFKSAVLVKPEDTLEDVMENIGTLYGNTPNNKVVEVSMNDSGQIQITDLKQGNNKL 302
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
++ + D++ +L I++ ++ ++
Sbjct: 303 DFHAVAFTPQADTKDELKNIIEAANQEGISMNEVTNRVMQAATAAPSNGDITKLNN 358
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 32/374 (8%), Positives = 85/374 (22%), Gaps = 11/374 (2%)
Query: 83 KAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSST 142
+ TI K T ++ + + G++ G ++
Sbjct: 363 TINNQQFTIDLKQTDFIKSKMTDTDGNAANGADYDNVYFEKNGNTVYGNVSQVIKGSNAY 422
Query: 143 ASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQV 202
A+ + + D + + + + + N + +
Sbjct: 423 ATDSTKLSEVMAGDSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSYPDPNNPGQTISFPI 482
Query: 203 LKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTT 262
+ + T S + AA+ +
Sbjct: 483 MHTNPATGNSGVVTGSNDITYGQINDIIGMFAADKIPTTTIQANNGQINNADYTQIQQLM 542
Query: 263 SGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTES 322
+ + S+ S + + +
Sbjct: 543 KDSQATVDVSMDYKGRISVTDKLSSGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSF 602
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE------KLAMEEMVSFIDTQIKCAT 376
+ +S +D + ++ + M+ + +D +
Sbjct: 603 SANNSLTIDEPNVDIIKDLDSMIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVS 662
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
+G+ + I + V+ ++D D L Q Q +++A
Sbjct: 663 KLNTTMGAYHNTIEGVNTRTSFLSVNVQSIKSNVIDVDYGEAMMNLMQTQLAYQASLKA- 721
Query: 437 SIVNNSTARILSLF 450
++T LSL
Sbjct: 722 ----STTISQLSLL 731
>gi|15642906|ref|NP_227947.1| flagellin, putative [Thermotoga maritima MSB8]
gi|4980624|gb|AAD35225.1|AE001699_2 flagellin, putative [Thermotoga maritima MSB8]
Length = 258
Score = 57.8 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 13/116 (11%), Positives = 37/116 (31%), Gaps = 3/116 (2%)
Query: 47 WSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGT 103
++ Q ++ I G ++ A AG+ + +
Sbjct: 35 LAVQQKLRGQIEGYKTTLSQIYNGIGLLNTANAGLESISTALQRARELAVQASNATLTDV 94
Query: 104 DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
+ IQ E ++ ++ I + +++N + L D+ + + + +
Sbjct: 95 ERSMIQKEYEEIMRGVKRIIQQTTYNEQRVLAGDVRNLVIQTGPNEGQNVTVNIPN 150
Score = 40.5 bits (92), Expect = 0.60, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 32/95 (33%), Gaps = 1/95 (1%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + + ID ++ + G +GS +R+ + + K L + +
Sbjct: 164 STFEGAQRSLETIDQALENISQIRGNVGSWMNRLESSARSVMNSYTELFKTES-LFEPSV 222
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A + +Q A+ + + +L L
Sbjct: 223 AELLLESTKEDILRQTALTGILFRMENAGNVLKLL 257
>gi|322432967|ref|YP_004210216.1| flagellin domain protein [Acidobacterium sp. MP5ACTX9]
gi|321165194|gb|ADW70898.1| flagellin domain protein [Acidobacterium sp. MP5ACTX9]
Length = 297
Score = 57.8 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 65/175 (37%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
+ A + ++ + N++ +VSSGLRVS +D+ A + +++ + + +
Sbjct: 6 NIASNVITDIQASDQNVQTALQQVSSGLRVSLPSDDPAASAALVQLQAQSANIDQYTTNA 65
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSS 127
S+ A + +S + +++ T G + + + S T++Q L ++ ++
Sbjct: 66 SSALSQAQSADSVVSSVVSLLNRAITLGTEGANSTSSTANRASIATEVQGLLSNVVSLAN 125
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ + S + + S D +V + +
Sbjct: 126 TSFQGISLFGGTVSGQAAFTADSTSATGYKYNGNSGVNSVSVGDSLSVQANIPGN 180
>gi|85710171|ref|ZP_01041236.1| Flagellin, N-terminus [Erythrobacter sp. NAP1]
gi|85688881|gb|EAQ28885.1| Flagellin, N-terminus [Erythrobacter sp. NAP1]
Length = 305
Score = 57.8 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/164 (10%), Positives = 58/164 (35%), Gaps = 5/164 (3%)
Query: 1 MTSILTNHSAM--SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNG 58
M+ + + A + ++ + ++E +Q ++++G+R+ +D+ S + +
Sbjct: 1 MSFVSNSTGAFFERSLTQMGSLRKDVERLQTQIATGVRIERGSDDPVAASRLRALARLET 60
Query: 59 ALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQL 115
+ ++ + A + + ++ + + T +I E+ Q+
Sbjct: 61 RGATEAENAARLEQDLAEAGNQIEGVVSILQRARELAVLAASDTTGETGRAAIADELDQM 120
Query: 116 QSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
+L + S G G+ + + ++ +
Sbjct: 121 SDELFARSNSLSITGAPLFAGTAGAPAFVRDANGVVTYNGNGQS 164
Score = 42.0 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 30/78 (38%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
A + ++ ID I A + IG+ + + + + V + ++ D D+A
Sbjct: 215 AQAARDALAGIDAAIDTANRSQTVIGTRAGWVEAIQQDQQTRAIDVAEKRSQIADTDVAD 274
Query: 418 ESTRLSALQTQQQLAVQA 435
RL T + + +
Sbjct: 275 TIVRLQQALTALEASQAS 292
>gi|120597312|ref|YP_961886.1| flagellar hook-associated protein 3 [Shewanella sp. W3-18-1]
gi|120557405|gb|ABM23332.1| flagellar hook-associated protein 3 [Shewanella sp. W3-18-1]
Length = 305
Score = 57.8 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/176 (12%), Positives = 57/176 (32%), Gaps = 5/176 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M ++ TN+ L++ Y++ + +S G+ + +D+ + D +
Sbjct: 5 MQNLYTNN-----LNSLQNTTYDVARLNQMLSKGVSILAPSDDPIGVVRVMDNQRDLALV 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ +S ++ +K A + S ++++ L+
Sbjct: 60 QQYIKNIDSLSTSMSRSETYLSSMVETQQRMKEISIATNSSNLSVEDRASYASEMEELLK 119
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+ + E+ G+ I + G T+ T
Sbjct: 120 GLVDNINATDESGNYLFSGNVIDKIPVVKDATGRYVYQGDANQRTVQTSNSSWTTA 175
>gi|300938648|ref|ZP_07153377.1| flagellar hook-associated protein 3 [Escherichia coli MS 21-1]
gi|300456433|gb|EFK19926.1| flagellar hook-associated protein 3 [Escherichia coli MS 21-1]
Length = 317
Score = 57.8 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 54/146 (36%), Gaps = 3/146 (2%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
T + + + +++S+G RV +++D+ S A ++ S +
Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNSSDDPIAASQAVVLSQAQAQNSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRD 121
A + KV + ++ +S+ + + KI D S+ ++I L+ QL +
Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
+A + NG S
Sbjct: 124 LANTTDGNGRYIFAGYKTESAPFSEA 149
Score = 42.0 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 27/319 (8%), Positives = 74/319 (23%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNSSDDPIAASQAVVLSQAQAQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + K + T + + + + ++
Sbjct: 61 QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G ++ G + + + S T K+
Sbjct: 121 LLNLANTTDGNGRYIFAGYKTESAPFSEADGKYEGGAESIKQQVDASRSMVIGHTGDKIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
++ + + + + D A+++ + +
Sbjct: 181 DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSL 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + LVD D + + QQ A
Sbjct: 241 NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA LSLF+
Sbjct: 297 LQASYKAFTDMQG-LSLFQ 314
>gi|152975151|ref|YP_001374668.1| flagellar hook-associated protein FlgL [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152023903|gb|ABS21673.1| flagellar hook-associated protein 3 [Bacillus cytotoxicus NVH
391-98]
Length = 287
Score = 57.8 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/158 (11%), Positives = 54/158 (34%), Gaps = 3/158 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L ++ + +++V+SG + +D+ + ++ + +
Sbjct: 3 VSTFQNANWAKNQLMGLSVQQQYHRNQVTSGKKNLHMSDDPLAAGKSFAIEHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLR 120
+ + + +A + ++ + G + K+I +E+ QL Q+
Sbjct: 63 QKDLKDSKNVLSQTEAALQGITKSLTRVDQLVLQAVNGTNGPKEMKAIGTEVNQLLKQVV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN 158
+A + + + + G
Sbjct: 123 YLANTKEQGRYLFGGESVEKQPFTEDGTYQGGNKNVTW 160
Score = 39.0 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 6/52 (11%), Positives = 21/52 (40%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+ ++G++ + + + A+++ + D D+A + L+
Sbjct: 211 LDKVLNQTTELGAVMNTLDTFNTILNEQNLALQENRKEIEDVDLAVAISDLA 262
>gi|93278369|gb|ABF06629.1| flagellin [Borrelia lonestari]
Length = 152
Score = 57.8 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 10/92 (10%), Positives = 31/92 (33%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
++ + ++ I+ + T +G+ +R+ + + ++
Sbjct: 61 QGGISSPINVTTAIDANASLTKIEDATRMVTDQRANLGAFQNRLESVKASTDYAIENLKA 120
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALS 437
++ DA M E + Q A+ ++
Sbjct: 121 SYAQIKDAIMTDEIVASTTNSILTQSAMAMIA 152
>gi|206895182|ref|YP_002246670.1| flagellar hook-associated protein 3 [Coprothermobacter
proteolyticus DSM 5265]
gi|206737799|gb|ACI16877.1| flagellar hook-associated protein 3 [Coprothermobacter
proteolyticus DSM 5265]
Length = 353
Score = 57.8 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/190 (11%), Positives = 59/190 (31%), Gaps = 1/190 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + Q L+ + L +QD++S+ ++ +D ++ K+ N +
Sbjct: 3 ITTAYQYERSVQTLQTVLGKLTQLQDQLSTLKQIQKPSDAPLDSALVMNWKAYNAQVERW 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT-DSKSIQSEITQLQSQLRDI 122
+ I ++ + ++ D+M +++ + G + + QL Q ++
Sbjct: 63 QNNIKEVENRYSYTEQNLTHIKDLMLNVRDLVIRGGGSDALGPEEKMAVSRQLIQQADEM 122
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
+ T + + + T +D E ++
Sbjct: 123 LSSLNAKYAGRFVLANAQVTKPEDPAWKPFKVLIQDSGGNFTFVDTITQAEDMVQKDPGS 182
Query: 183 GTERYGLLDR 192
Sbjct: 183 KWMVVFEPKT 192
Score = 51.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/333 (10%), Positives = 83/333 (24%), Gaps = 1/333 (0%)
Query: 100 ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
+ + + +L + S + +D +A + + +
Sbjct: 4 TTAYQYERSVQTLQTVLGKLTQLQDQLSTLKQIQKPSDAPLDSALVMNWKAYNAQVERWQ 63
Query: 160 KVQITTIDYYLDPETVLLDSSTDG-TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+ Y E L R ++ + P+ + + + +
Sbjct: 64 NNIKEVENRYSYTEQNLTHIKDLMLNVRDLVIRGGGSDALGPEEKMAVSRQLIQQADEML 123
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
+ A + + + + T +
Sbjct: 124 SSLNAKYAGRFVLANAQVTKPEDPAWKPFKVLIQDSGGNFTFVDTITQAEDMVQKDPGSK 183
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
++ + + + N++ S T+D +D
Sbjct: 184 WMVVFEPKTFDELNDPSRRAVSVEIGNNSTIPQVLAVEDYFKFSGTVDVNGASYHRMDMF 243
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ T + T + + + + D + T + IG+ R+ +DF K
Sbjct: 244 DKLFTFSETLRNGGSLASPDNTGKTALDYTDEILDGLTDSIASIGARVQRLGSLDDFYKN 303
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ VE DAD+A + T Q
Sbjct: 304 VSTNVEALRSSYEDADLARTYVEYTKFHTSYQS 336
>gi|30721710|gb|AAP34186.1| FliC [Pseudomonas aeruginosa]
Length = 144
Score = 57.8 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 25/95 (26%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T S + + + + V ID IK
Sbjct: 50 TSAVSGVVIADTGSTGVGTAAGVTPSATAFAKTNDTVAKIDISTAKGAQSAVLVIDEAIK 109
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVG 408
A +G++ +R + +K + + V G
Sbjct: 110 QIDAQRADLGAVQNRFDNTINNLKNIGENVSAARG 144
>gi|146294543|ref|YP_001184967.1| flagellar hook-associated protein 3 [Shewanella putrefaciens CN-32]
gi|145566233|gb|ABP77168.1| flagellar hook-associated protein 3 [Shewanella putrefaciens CN-32]
Length = 305
Score = 57.8 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/176 (12%), Positives = 58/176 (32%), Gaps = 5/176 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M ++ TN+ L++ Y++ + +S G+ + +D+ + D +
Sbjct: 5 MQNLYTNN-----LNSLQNTTYDVARLNQMLSKGVSILAPSDDPIGVVRVMDNQRDLALV 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
I S+ + ++ +S ++ +K A ++ S ++++ L+
Sbjct: 60 QQYIKNIDSLSTSMSRSETYLSSMVETQQRMKEISIATNSSNLSAEDRASYASEMEELLK 119
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+ + E+ G+ I + G T+ T
Sbjct: 120 GLVDNINATDESGNYLFSGNVIDKIPVVKDATGRYVYQGDANQRTVQTSNSSWTTA 175
>gi|283833623|ref|ZP_06353364.1| flagellar hook-associated protein 3 [Citrobacter youngae ATCC
29220]
gi|291071306|gb|EFE09415.1| flagellar hook-associated protein 3 [Citrobacter youngae ATCC
29220]
Length = 317
Score = 57.4 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 50/175 (28%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + +++S+G RV + +D+ S A ++ S
Sbjct: 3 ISTQMMYQQNMRGITNSQAEWMKFGEQMSTGKRVINPSDDPIAASQAVVLSQAQAQNSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ A + KV + + +++ + + KI S T LQ +
Sbjct: 63 TLARTFATQKVSLEENVLNQVTTAIQAAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
++ N G T S + V D
Sbjct: 123 NLANSTDGNGRYIFGGYKTESAPFAQADGSYNGGTTNVTQQVDASRTMVIGHTGD 177
>gi|161526178|ref|YP_001581190.1| flagellar hook-associated protein FlgL [Burkholderia multivorans
ATCC 17616]
gi|189349106|ref|YP_001944734.1| flagellar hook-associated protein FlgL [Burkholderia multivorans
ATCC 17616]
gi|160343607|gb|ABX16693.1| flagellar hook-associated protein 3 [Burkholderia multivorans ATCC
17616]
gi|189333128|dbj|BAG42198.1| flagellar hook-associated protein 3 [Burkholderia multivorans ATCC
17616]
Length = 411
Score = 57.4 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 47/393 (11%), Positives = 100/393 (25%), Gaps = 4/393 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T ++ D L + ++SSG+ +S AADN + A + + LS
Sbjct: 3 ISTAQFYQLNVAQMSDQQAQLAQLYQQISSGVSLSTAADNPLGAAQAVQLSMTSATLSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIK---NKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + S + ++ D+++TI G +D ++ +++ + QL
Sbjct: 63 ATNQNVALSSLQKEDQALTTVNDLLNTIHSSVMHAGDGSLSDSDRSALATQLQGYRDQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G ++ + G D G Q+ D + S
Sbjct: 123 TLANSTDGAGNYLFAGYQSTTAPFANGTGGGVVYSGDRGARQVQIADTRTIAQGDDGASV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G I + T G D
Sbjct: 183 FLSVPMLGSQPVPAAGAANQGTA-TIGAVTITDPSAATNAHTFTITFGGTSAAPTYTVTD 241
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ T P P A + + + T
Sbjct: 242 ETVAPPTTTAPQPYAAGTAIALGNGLSVPVSGTPSPNDTFSVTPAPQAGTDVFATLDTMI 301
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + +T + I + + V A N+
Sbjct: 302 AALKVPIGSDTVAAAKLANAMTTGTTKLDNTMTNILTVQASVGGREQEIQAMQAVNQTNT 361
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
++ + D + + + + + +
Sbjct: 362 LQVTSNLADLTSTNMVSTISQFLQMQNALTGAQ 394
>gi|330447911|ref|ZP_08311559.1| flagellar hook-associated protein 3 [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328492102|dbj|GAA06056.1| flagellar hook-associated protein 3 [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 299
Score = 57.4 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 58/190 (30%), Gaps = 3/190 (1%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
+ L N L V ++S+G R+ +DN ++ +N A++ D I
Sbjct: 9 SQLMLTSLSKNNQGLGEVLAQMSTGQRLLKLSDNPIDSINLLNLERENSAINQYQDNINN 68
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLRDIARGS 126
+ + + + A D + +++ + G D +S +++ L+
Sbjct: 69 VKTALSSQEVHLMAASDTLKEMRDTLLLASNGAISDADRESYANKLVSLRDAFMSSFNVQ 128
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
G A A+ G ++ K +T D
Sbjct: 129 DEEGNYLFSGTQSDVPAITAQPAGGYIFEGNSDKRVVTVAKGVTMEANFASQEMLDLGGN 188
Query: 187 YGLLDRNHKI 196
L + I
Sbjct: 189 NILNQIDAAI 198
>gi|304397211|ref|ZP_07379090.1| flagellar hook-associated protein 3 [Pantoea sp. aB]
gi|304355360|gb|EFM19728.1| flagellar hook-associated protein 3 [Pantoea sp. aB]
Length = 321
Score = 57.4 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/228 (13%), Positives = 59/228 (25%), Gaps = 3/228 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN + + D + V +++SSG RV++ +D+ S A ++
Sbjct: 3 ISTNMIFEQQVRGITDSQASWLKVGEQLSSGRRVTNPSDDPIAASRAVVLTQTQQQGKQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL---QSQLR 120
+ A + + + + + + I G S TQL ++QL
Sbjct: 63 ALARTFAEQGLSLEDNTLKGVTNGIIAAQGLIVNGSTGTLSDDDRGSIATQLEGIRAQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ A NG S + + G N + DS
Sbjct: 123 NQANSKDANGRYIFAGYKTDSAPFVDTAGTGVSYTGGNEAITQKVDTSRTMTVAHTGDSI 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
+ + + T
Sbjct: 183 FMSITGNATKEPDGSASETNVFTMLDSAIAALKVPQDNADAATKQTFQ 230
>gi|77918752|ref|YP_356567.1| flagellar hook-filament junction protein [Pelobacter carbinolicus
DSM 2380]
gi|77544835|gb|ABA88397.1| flagellar hook-filament junction protein [Pelobacter carbinolicus
DSM 2380]
Length = 296
Score = 57.4 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 16/150 (10%), Positives = 51/150 (34%), Gaps = 4/150 (2%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
++ ++ Q+ +SG++++ ++D+ + + +S + + ++
Sbjct: 13 QSQISRSTAKMQQYQETAASGIKLNTSSDDPSAVAPVINAQSQIRSGERFQSTVVAATNY 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQ---LQSQLRDIARGSSFNG 130
+D + + + ++M K + A I + Q L+ + +A + G
Sbjct: 73 LDNQDSTLDQLENLMVQAKELVLAAGNGSLGDGEIAAYGQQMTSLREEAFALA-NTQVEG 131
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
+ + + D N
Sbjct: 132 KYLFAGFKTDTQPFPDPMDPTDYQGDGNHT 161
>gi|221199747|ref|ZP_03572790.1| flagellar hook-associated protein 3 [Burkholderia multivorans
CGD2M]
gi|221208648|ref|ZP_03581648.1| flagellar hook-associated protein 3 [Burkholderia multivorans CGD2]
gi|221171459|gb|EEE03906.1| flagellar hook-associated protein 3 [Burkholderia multivorans CGD2]
gi|221179986|gb|EEE12390.1| flagellar hook-associated protein 3 [Burkholderia multivorans
CGD2M]
Length = 411
Score = 57.4 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/393 (11%), Positives = 101/393 (25%), Gaps = 4/393 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T ++ D L + ++SSG+ +S AADN + A + + LS
Sbjct: 3 ISTAQFYQLNVAQMSDQQAQLAQLYQQISSGVSLSTAADNPLGAAQAVQLSMTSATLSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ + S + ++ ++++I + + G +D ++ +++ + QL
Sbjct: 63 ATNQNVALSSLQKEDQALTSVNSLLNSIHSIVIRAGDGALSDSDRSALATQLQGYRDQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G ++ + G D G Q+ D + S
Sbjct: 123 TLANSTDGAGNYLFAGYQSTTAPFANGTGGGVVYSGDRGARQVQIADTRTIAQGDDGASV 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G I + T G D
Sbjct: 183 FLSVPMLGSQPVPAAGAANQGTA-TIGAVTITDPSAATNTHTFTITFGGTSAAPTYTVTD 241
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ T P P A + + + T
Sbjct: 242 ETAAPPTTTAPQPYADGTAIALGNGLSVPVSGTPSPNDTFSVTPAPQAGTDVFATLDTMI 301
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+ + +T + I + + V A N+
Sbjct: 302 AALKVPIGSDTVAAAKLANAMTTGTTKLDNTMTNILTVQASVGGREQEIQAMQAVNQTNT 361
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
++ + D + + + + + +
Sbjct: 362 LQVTSNLADLTSTNMVSTISQFLQMQNALTGAQ 394
>gi|254443148|ref|ZP_05056624.1| flagellar hook-associated protein 3 [Verrucomicrobiae bacterium
DG1235]
gi|198257456|gb|EDY81764.1| flagellar hook-associated protein 3 [Verrucomicrobiae bacterium
DG1235]
Length = 303
Score = 57.4 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 57/168 (33%), Gaps = 2/168 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ N + L+ + ++ ++ ++V++G R+S ++++A + M+ + ++
Sbjct: 3 VTNNTFPDTLLSHLQRVTKDMNMLNEQVATGQRISKVSEDSASANRILDMQEEKHRITQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT--AGVERGTDSKSIQSEITQLQSQLRD 121
S + + + + I + + T G++ ++ E+ +L
Sbjct: 63 SKNAARAQNINNTTISQLQNFIQISDRVGELATLADGLKGADGMRAYAEEVDELIKHAMQ 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
A + D G+ G I G V
Sbjct: 123 SANAKFNGEYIFGGVDSGTEPFVANTDADGKIIAAPGGAVTYEGAATG 170
>gi|311280010|ref|YP_003942241.1| flagellar hook-associated protein 3 [Enterobacter cloacae SCF1]
gi|308749205|gb|ADO48957.1| flagellar hook-associated protein 3 [Enterobacter cloacae SCF1]
Length = 316
Score = 57.4 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 62/179 (34%), Gaps = 6/179 (3%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q + I + +++S+G RV+ +D+ S A ++ + + A
Sbjct: 7 MMYQQNMNGITNSQSTWLQYGEQMSTGKRVNRPSDDPIAASQAVVLSQAQAQNAQFASAR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLRDIAR 124
+ +V + +++ + + + KI G D S+ +++ ++ QL ++A
Sbjct: 67 SFATQRVSQEENVLTQVTTAIQSAQEKIVYAGDGTLSDDDRASLATDLQGIRDQLLNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
NG S A + +V + + D+ T
Sbjct: 127 SQDGNGRYMFAGYKTDSAPFDANGNYTGGTTNVEQQVDSSRTMVIGHTGDKIFDAITSN 185
Score = 39.0 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 23/293 (7%), Positives = 69/293 (23%)
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ S Q++T P + +S
Sbjct: 7 MMYQQNMNGITNSQSTWLQYGEQMSTGKRVNRPSDDPIAASQAVVLSQAQAQNAQFASAR 66
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+ + + + + A + + + A
Sbjct: 67 SFATQRVSQEENVLTQVTTAIQSAQEKIVYAGDGTLSDDDRASLATDLQGIRDQLLNLAN 126
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + SA + GN + +S T K+ +
Sbjct: 127 SQDGNGRYMFAGYKTDSAPFDANGNYTGGTTNVEQQVDSSRTMVIGHTGDKIFDAITSNA 186
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + + + + +T A+++ + + +
Sbjct: 187 VKEPDGSASETNVFSMLDSAIAALKTPVANDDTAKAAAAAAIDKTNRGLRNSLNNVLSVR 246
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++G+ + + + + + + + LVD D + + + Q Q +
Sbjct: 247 AEVGTQLNELDKLDALGDDRKLSQTQQMSDLVDVDWNATISNYTMQQAALQAS 299
>gi|212709499|ref|ZP_03317627.1| hypothetical protein PROVALCAL_00541 [Providencia alcalifaciens DSM
30120]
gi|212687837|gb|EEB47365.1| hypothetical protein PROVALCAL_00541 [Providencia alcalifaciens DSM
30120]
Length = 305
Score = 57.4 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 48/169 (28%), Gaps = 4/169 (2%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
Q + + +++SG RV+ +D+ S A + + G +
Sbjct: 7 LQDMNNSEARWMAAGSQLASGKRVNKPSDDPQASSQAVRINQSENRNQQYVTSRGFAKTG 66
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVE----RGTDSKSIQSEITQLQSQLRDIARGSSFN 129
+ + + +++ DV + I I D ++ +IT L+ QL + + N
Sbjct: 67 MTLQMSILTQMTDVTTQIDTSIIQASNQGALSDKDRNTLADQITGLKEQLVALGNSTDGN 126
Query: 130 GENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
G + + +
Sbjct: 127 GRYIFAGFKSDKAPFEIDADGEVLYHGGDKPITQNVASDREMTTYFTGA 175
>gi|167043518|gb|ABZ08214.1| putative bacterial flagellin N-terminal domain [uncultured marine
microorganism HF4000_APKG2J17]
Length = 199
Score = 57.1 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 1/197 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ + S L+ +E R+S+G RV+ A+N + +A+ + G L
Sbjct: 1 MSEVTLTQSTRVNLLALKKNTALIEQTSLRLSTGKRVNAPAENVRAFVLAKALTDQAGDL 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE-RGTDSKSIQSEITQLQSQL 119
+V IG S V A G+ ++ +K + + + + +L++QL
Sbjct: 61 LSVKGPIGQSLSAVGGALDGIDTITRLVEQLKATASGATDRTAAERAEQAASFDRLRAQL 120
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
IA ++ G N L S T + + S + +
Sbjct: 121 DGIAADINYGGVNLLAASPDSLTVTFDNTSGSSLTIEGVASDSQALGIGDGAVTFNNFAT 180
Query: 180 STDGTERYGLLDRNHKI 196
D LD
Sbjct: 181 DADIQAAIDALDAAITT 197
>gi|315125991|ref|YP_004067994.1| lateral flagellar hook-associated protein, LfgL [Pseudoalteromonas
sp. SM9913]
gi|315014505|gb|ADT67843.1| lateral flagellar hook-associated protein, LfgL [Pseudoalteromonas
sp. SM9913]
Length = 298
Score = 57.1 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 12/132 (9%), Positives = 49/132 (37%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
+++ + ++ N ++++ R+ +D+ + + S+ +L +
Sbjct: 10 LNSIKNIQSNTENFNEKSIQLATNKRILKPSDDPLGTVMIMNLGSEIKSLEQYKTNMDAV 69
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ + + ++ ++ + ++++ IT + I++ ++ I +
Sbjct: 70 NFSLGQQEVQLTGIVNQIYSLQSLITTAADGSMGEAEIKALGQEMSVAFPAIVDLLNATD 129
Query: 131 ENWLRTDLGSST 142
+ GS T
Sbjct: 130 SDGQYYFSGSKT 141
>gi|51895611|gb|AAU13837.1| flagellin A subunit [Helicobacter pylori]
Length = 400
Score = 57.1 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/159 (15%), Positives = 50/159 (31%), Gaps = 3/159 (1%)
Query: 53 MKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQ 109
++S +L G + +A M + + ++ T+K K T + K+IQ
Sbjct: 1 LRSQASSLGQAIANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQ 60
Query: 110 SEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYY 169
S+I +L L +I +++NG+ L + + S
Sbjct: 61 SDIVRLIQGLDNIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVR 120
Query: 170 LDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
+ ++ S + N +V
Sbjct: 121 IATGALITASGDISLTFKQVDGVNDVTLESVKVSSSAGT 159
>gi|317492421|ref|ZP_07950850.1| flagellar hook-associated protein 3 [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316919760|gb|EFV41090.1| flagellar hook-associated protein 3 [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 326
Score = 57.1 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 7/137 (5%)
Query: 8 HSAMSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
++M Q + I Q +++SG RV + +D+ S +K +
Sbjct: 4 STSMMYQQNMGSITDAQSEWQRIGQQLTSGKRVINPSDDPLAASQLVGLKQAQAQNDQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG----TDSKSIQSEITQLQSQLR 120
A G V + ++ + + + I + G G D SI ++ ++ QL
Sbjct: 64 MARGYARQGVSMEESVLQQVTSTLQDITPVLVDGASSGSKSDDDRASIAKQLEGMRDQLL 123
Query: 121 DIARGSSFNGENWLRTD 137
++A S NG
Sbjct: 124 NLANSSDGNGRYVFAGF 140
>gi|229043514|ref|ZP_04191224.1| Flagellin [Bacillus cereus AH676]
gi|229051512|ref|ZP_04195003.1| Flagellin [Bacillus cereus AH676]
gi|228721839|gb|EEL73292.1| Flagellin [Bacillus cereus AH676]
gi|228725892|gb|EEL77139.1| Flagellin [Bacillus cereus AH676]
Length = 49
Score = 57.1 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 22/49 (44%)
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ DADMA E + ++ + + + LS N + + L +
Sbjct: 1 MASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 49
>gi|283784091|ref|YP_003363956.1| lateral flagellar hook associated protein 3 [Citrobacter rodentium
ICC168]
gi|282947545|emb|CBG87098.1| lateral flagellar hook associated protein 3 [Citrobacter rodentium
ICC168]
Length = 309
Score = 57.1 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 18/176 (10%), Positives = 58/176 (32%), Gaps = 3/176 (1%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ D++ +L V ++++G + +D+ + + A+ + I S+ +
Sbjct: 14 RNFNDLSGDLAHVVTQMATGKSILLPSDDPIASTRITQLNRQQSAIEQYQNNIDSASAGM 73
Query: 75 DIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
++ + + + ++++ + G S+ +I L + +G
Sbjct: 74 SQQESILDGVNNALLSVRDDLLEAANGTNTADSLASLGQDIASLTESMVAALNYQDEDGH 133
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
+ +A G + D V +D++ ++ +
Sbjct: 134 YVFGGTVNDKPPILAVDDDGDGVTDSYSYQGNGDHRQTTVSNGVEVDTNVAVSDFF 189
>gi|157371200|ref|YP_001479189.1| flagellar hook-associated protein 3 [Serratia proteamaculans 568]
gi|157322964|gb|ABV42061.1| flagellar hook-associated protein 3 [Serratia proteamaculans 568]
Length = 319
Score = 57.1 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 54/145 (37%), Gaps = 5/145 (3%)
Query: 8 HSAMSASQKLRDINYNLE---VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
++M Q + I N ++SSG +VS+ +D+ S A ++ + +
Sbjct: 4 STSMMYQQNMSGITDNQSLFMKAAQQLSSGKKVSNPSDDPLAASQAVMLAQSQSENTQYA 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG--VERGTDSKSIQSEITQLQSQLRDI 122
A V + + + A ++ +K I E D S+ +++ L+ QL +
Sbjct: 64 LARTFARQSVSMEETVLGGATSTIADMKALIVNAGGTESDNDRDSLATQLQGLKDQLLNQ 123
Query: 123 ARGSSFNGENWLRTDLGSSTASIAK 147
A + NG + +
Sbjct: 124 ANSTDGNGRYMFGGFVNDKPPFVDN 148
>gi|229183951|ref|ZP_04311167.1| Flagellin [Bacillus cereus BGSC 6E1]
gi|228599603|gb|EEK57207.1| Flagellin [Bacillus cereus BGSC 6E1]
Length = 49
Score = 57.1 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 22/49 (44%)
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ DADMA E + ++ + + + LS N + + L +
Sbjct: 1 MAASASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 49
>gi|148554182|ref|YP_001261764.1| flagellin domain-containing protein [Sphingomonas wittichii RW1]
gi|148499372|gb|ABQ67626.1| flagellin domain protein [Sphingomonas wittichii RW1]
Length = 285
Score = 57.1 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 3/136 (2%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
T +SA++ + + + Q +S+G +V A+D+ + ++ S
Sbjct: 5 TRYSAIAQINRQAKLGEEIARTQTEISTGKKVQTASDDPISAARIAELRRVQADQVTWSR 64
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDI 122
I S M D+ + +K A D ++ E+ L++ L +I
Sbjct: 65 NIQTAQSVAAQVDTQMGNMADIFNRVKELTLAGRSDSASAADRAAMVQELQSLRTALSNI 124
Query: 123 ARGSSFNGENWLRTDL 138
A S+ G+ TD
Sbjct: 125 ATTSTPTGQALFPTDA 140
Score = 51.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 37/80 (46%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
+S ID ++ T G + ++ + D ++ + + + L D D+A+ +L+
Sbjct: 200 ALSDIDVAVQRVTDQRAAQGVRAQQLDVAADTLEGVSTQLSEERSSLEDTDVAAAIMKLN 259
Query: 424 ALQTQQQLAVQALSIVNNST 443
A Q A A + VN++T
Sbjct: 260 AKTLTLQAAQAAFAKVNSNT 279
>gi|89145666|gb|ABD62022.1| Fla [Borrelia burgdorferi]
gi|89145668|gb|ABD62023.1| Fla [Borrelia burgdorferi]
Length = 152
Score = 57.1 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 13/151 (8%), Positives = 42/151 (27%)
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
+ + V + VA + + ++ +
Sbjct: 2 QASWTLRVHVGANQDEAIAVNIYAANVANLFSGEGAQTAQAAPVQEGVQQEGAQQQPAPA 61
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ + + ++ I+ I+ + +G+ +R+ ++ + +
Sbjct: 62 TAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMVSDQRANLGAFQNRLESIKNSTEYAIE 121
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLA 432
++ ++ DA M E + Q A
Sbjct: 122 NLKASYAQIKDATMTDEVVAATTNSILTQSA 152
>gi|317047698|ref|YP_004115346.1| flagellar hook-associated protein 3 [Pantoea sp. At-9b]
gi|316949315|gb|ADU68790.1| flagellar hook-associated protein 3 [Pantoea sp. At-9b]
Length = 320
Score = 57.1 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/311 (10%), Positives = 85/311 (27%), Gaps = 3/311 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN + + D + V +++SSG RV++ +D+ S A ++ +
Sbjct: 3 LSTNMIFNQQVRGITDSQASWLKVGEQLSSGRRVTNPSDDPIAASRAVVLSQTQAKSAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ A + + + + +S + + I G D SI + + ++SQL
Sbjct: 63 ATARSFANQSLSMEENTLSSVTSSIQDAQTLIVQGSTGTLSDDDRASIATSLEGIRSQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A NG + +++ N Q +
Sbjct: 123 GLANSKDGNGNYIFAGYQTDTEPFTDDGTGVTYVGGSNPITQKVDDSRTMSVGDTGTSVF 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T + + D ++ + K +
Sbjct: 183 MSITSNAKAEPDGSASETNLFNMLDSAIAALKVPQDNADDATKQTFQDAMDKTNRGLSNS 242
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
++ + + + + + + + T + +
Sbjct: 243 LNNVLSVRSAVGSKMSELDTLDAQGDDRDTIMASQMSDLVDVDYTSAISSYTMQQTALQA 302
Query: 301 PGYTNSTVAKV 311
+ ++K+
Sbjct: 303 SYTVFTQMSKM 313
Score = 39.7 bits (90), Expect = 0.87, Method: Composition-based stats.
Identities = 23/187 (12%), Positives = 55/187 (29%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
A N +G ++ + + + T K + ++ +
Sbjct: 123 GLANSKDGNGNYIFAGYQTDTEPFTDDGTGVTYVGGSNPITQKVDDSRTMSVGDTGTSVF 182
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ E S +L +DS + + + + + AM++ +
Sbjct: 183 MSITSNAKAEPDGSASETNLFNMLDSAIAALKVPQDNADDATKQTFQDAMDKTNRGLSNS 242
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ + +GS S + + + + LVD D S + + QT Q
Sbjct: 243 LNNVLSVRSAVGSKMSELDTLDAQGDDRDTIMASQMSDLVDVDYTSAISSYTMQQTALQA 302
Query: 432 AVQALSI 438
+ +
Sbjct: 303 SYTVFTQ 309
>gi|269138589|ref|YP_003295289.1| flagellar hook-associated protein [Edwardsiella tarda EIB202]
gi|267984249|gb|ACY84078.1| flagellar hook-associated protein [Edwardsiella tarda EIB202]
Length = 311
Score = 57.1 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/200 (10%), Positives = 60/200 (30%), Gaps = 7/200 (3%)
Query: 8 HSAMSASQKLR---DINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
++M Q + D + + ++ SG +V + +D+ S +
Sbjct: 4 STSMIYQQNMNGVLDAQSEWQRIGAQLDSGKKVINPSDDPLGSSQLVGLNQAKSMNEQYG 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA----GVERGTDSKSIQSEITQLQSQLR 120
A G + ++ + + +V+ + G + D +I +++ ++ QL
Sbjct: 64 MARGYARQSTSMEESVLQQVTNVLQNATPVLVDGMSSGTKSDDDRAAIATQLESMRDQLL 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++A + NG + + N + + +
Sbjct: 124 NLANSTDGNGRYIFAGYKSDAAPFTKGAASEVTYGGGNKALTQQVDAARTMTVSHTGNQV 183
Query: 181 TDGTERYGLLDRNHKIKVEP 200
+ + + ++
Sbjct: 184 FQPGTGEQDIFASLQQAIDA 203
Score = 42.0 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 8/127 (6%), Positives = 34/127 (26%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ + +D+ + + + + + ++ +
Sbjct: 173 TMTVSHTGNQVFQPGTGEQDIFASLQQAIDALKMPLEGKDDAAKKAVADKLDSANRGLRN 232
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ + ++G+ + + + + + + D D T + Q Q
Sbjct: 233 SLNNVSRVRAELGTQLNELDSLDAIGDENAITYKTRISSVQDVDWNQAITDYTFRQVSLQ 292
Query: 431 LAVQALS 437
+ + S
Sbjct: 293 ASYKVFS 299
>gi|237750865|ref|ZP_04581345.1| flagellar hook-associated protein FlgL [Helicobacter bilis ATCC
43879]
gi|229373310|gb|EEO23701.1| flagellar hook-associated protein FlgL [Helicobacter bilis ATCC
43879]
Length = 850
Score = 56.7 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/291 (8%), Positives = 73/291 (25%), Gaps = 3/291 (1%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+I NL + +++SG ++ +A+ + ++ D L D ++
Sbjct: 13 LNNNGNITSNLNDMNTKIASGKKIQYGWQDASVSNQNLKLEYDETTLQQGIDVARTAETQ 72
Query: 74 VDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ + M K K + T +++ ++ ++ + IA S
Sbjct: 73 TLNTDKALQEISLAMVQFKTKLLHAANDLHTPTSREALARDLEATKAHIISIANTSVGGK 132
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+ + + + G+ + + + E + D
Sbjct: 133 FIFAGSKVDVQPFDSVGNYYGNDEELSALVSSKNLVPFNITGEELFYGFDNDKHRLITTN 192
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
R + D + + + L G + + +
Sbjct: 193 GRMLNQTRLHPAIMDNSEKHSEPTEVYIKEDDTLRDLIGDNDNNPRNNGKEYFYVQGVNS 252
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ G + K+ + + ++
Sbjct: 253 RGQSFKEKFALDVGFTNPKNATTVRDLLDRIGKAFGNTHATKVVDVRLNNW 303
>gi|218289684|ref|ZP_03493892.1| flagellar hook-associated protein 3 [Alicyclobacillus
acidocaldarius LAA1]
gi|218240141|gb|EED07325.1| flagellar hook-associated protein 3 [Alicyclobacillus
acidocaldarius LAA1]
Length = 322
Score = 56.7 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 59/183 (32%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T L +IN ++ VQ+++S+G ++ D+ S + S+ +SA
Sbjct: 3 ITTAMEQQQFLYNLENINTAMQNVQEQLSTGKVLNLPQDDPVAVSKDMDLASEMSQISAN 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I G S ++ ++ M + + I++ + A + S + + +QL
Sbjct: 63 LSTISSGLSWMNATQSAMQGMVTQLQQIQSNLVAAMNTSNQSSAGLQGYAETIAQLIQGV 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ G + + + + + +++
Sbjct: 123 YQIADQTVGSRYLFGGQADNVAPTTYLKTSPNGTPQVIPPGAGPQSTPYNPFDDANASPP 182
Query: 184 TER 186
Sbjct: 183 NVN 185
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 47/170 (27%)
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + G + S +P + N +
Sbjct: 141 DNVAPTTYLKTSPNGTPQVIPPGAGPQSTPYNPFDDANASPPNVNEIIGNQVSIRVTVTA 200
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
D+ G + + +++ ++ + + +G+ R
Sbjct: 201 YDIFLTSPGGGPNLQDTLNDIQTDLQSGNTAGLKQDLTNLQANLNQVINLNAALGARIQR 260
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+ ++ + + + G + ADMA T+ S Q + A+Q +
Sbjct: 261 MTAAQNQLTQYQTNLSNLKGGIEGADMAQVMTQFSTDQVIYEAALQMGAQ 310
>gi|332187886|ref|ZP_08389619.1| flagellar hook-associated protein 3 [Sphingomonas sp. S17]
gi|332012047|gb|EGI54119.1| flagellar hook-associated protein 3 [Sphingomonas sp. S17]
Length = 297
Score = 56.7 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/155 (12%), Positives = 48/155 (30%), Gaps = 3/155 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN AS+++ + +S+G ++ + +D+AA + + +
Sbjct: 3 ISTNVFYDMASRRMNALTGKANAAMVEISTGKKLQNPSDDAAAAAQIAEFDRRDADDAVY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLR 120
+ L S + A + + + + T + S+ +I ++ L
Sbjct: 63 KTNLTLAGSLLQQADTTLGQIGNQVQKALELATQAANGTLSAANRASVGDQIASIRDALV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR 155
+A G G+ +
Sbjct: 123 GLANSKDARGLPLFGAAAGTDAVRMTNGAYTYSQA 157
Score = 43.2 bits (99), Expect = 0.082, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 32/91 (35%), Gaps = 5/91 (5%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
+ + + + + IG+ +R+ LQ+ + + DAD +
Sbjct: 208 TIRDAMDKLSAANDNVASVQASIGAREARVELQQGLQQQAATDRATLRSTVEDADPTTAI 267
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLF 450
T+L T Q + + + LSLF
Sbjct: 268 TQLQQTMTVLQA-----TQASFTKLSSLSLF 293
>gi|270262394|ref|ZP_06190665.1| flagellar hook-associated protein 3 [Serratia odorifera 4Rx13]
gi|270043078|gb|EFA16171.1| flagellar hook-associated protein 3 [Serratia odorifera 4Rx13]
Length = 319
Score = 56.7 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 50/145 (34%), Gaps = 2/145 (1%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
T+ + +++S+G +VS+ +D+ S A ++ + +
Sbjct: 4 STSMMYQQNMTGITGNQSLFMKAAEQLSTGKKVSNPSDDPLAASQAVMLAQSQSENTQYA 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG--VERGTDSKSIQSEITQLQSQLRDI 122
A V + + ++ A +S +K I + D S+ +++ L+ QL +
Sbjct: 64 LARTFARQSVSMEETVLAGATSTISDMKALIVNAGGTKSDNDRDSLATQLQGLKDQLLNQ 123
Query: 123 ARGSSFNGENWLRTDLGSSTASIAK 147
A + NG
Sbjct: 124 ANSTDGNGRFMFGGFENDKPPFANN 148
>gi|325524326|gb|EGD02428.1| flagellar hook-associated protein FlgL [Burkholderia sp. TJI49]
Length = 411
Score = 56.7 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 50/392 (12%), Positives = 97/392 (24%), Gaps = 10/392 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T ++ D L + ++SSG+ +S ADN + A + + LS
Sbjct: 3 ISTAQFYQLNVAQMSDQQAQLAQLYQQISSGVSLSTPADNPLGAAQAVQLSMTSATLSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ---SQLR 120
+ + S + ++ ++++TI + + + + TQLQ QL
Sbjct: 63 ATNQNVALSSLQKEDQTLTTVNNLLNTIHSSVMQAGDGSLSDSDRSAIATQLQGYRDQLM 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + G ++ + G+ D G Q+ D + S
Sbjct: 123 TLANTTDGAGNYLFAGYQSTTAPFSNSTGGGAIYSGDRGARQVQIADTRTIAQGDDGASV 182
Query: 181 TD-------GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233
+ + D + TI+ A T
Sbjct: 183 FMSVPMLGSQPVPAAGARNLGTGTIGAVSITDPSAATNTHQFTITFGGTSDAPTYTVTDN 242
Query: 234 AANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATT 293
A + SGT S A
Sbjct: 243 TATPATTTDPQPYEAGTAIALGNGLTVPVSGTPASGDTFSVTPAPQAGTDVFATLDTMIA 302
Query: 294 KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD 353
+ + T ++T + + + NT
Sbjct: 303 ALKVPVGNDTAAAAALANTMTTGTTKLDNTMTNILTVQASVGGREQEIQAMQAVNQTNTL 362
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
LA + + T + G+
Sbjct: 363 QVTSNLADVTSTNMVTTISQFLQMQNALTGAQ 394
>gi|222053747|ref|YP_002536109.1| flagellin domain protein [Geobacter sp. FRC-32]
gi|221563036|gb|ACM19008.1| flagellin domain protein [Geobacter sp. FRC-32]
Length = 271
Score = 56.7 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 45/251 (17%), Positives = 83/251 (33%), Gaps = 2/251 (0%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
++ + L QDR+SSG +V+ A DN + AQ G L A D + +
Sbjct: 16 LLTMQKTSDLLNRTQDRLSSGKKVNSALDNPTNYFAAQSYSQRAGDLDARKDGMSEAVQQ 75
Query: 74 VDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
V A AG++ ++ + K T+ T S+ + L+ Q+ +A SS+ G+
Sbjct: 76 VKAANAGITAITSLIESAKGLATSALSTSNTTTRASLAGQYDTLRQQIDKLASDSSYGGK 135
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
N L+ + + + S + SS G +
Sbjct: 136 NLLQNQNITVNFNEDATSTLSVSGFSANSTGLAMSANSNSWSADTDISSDSGKMDSAITT 195
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVP 251
K + L I S I+T + A + A + ++
Sbjct: 196 LRSKTQTLSANLNIITTRQDFTSSMINTLSTGADNLTLADMNQEGANMLMLQTRQSLGTT 255
Query: 252 LPAAPAAPNTT 262
+ + +
Sbjct: 256 ALSLSSQAAQS 266
Score = 54.0 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 56/132 (42%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ T + SG+S + + AN+++++ + +D+ I +
Sbjct: 140 NQNITVNFNEDATSTLSVSGFSANSTGLAMSANSNSWSADTDISSDSGKMDSAITTLRSK 199
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
+ + + I ++DF M + + G L ADM E + LQT+Q L ALS+
Sbjct: 200 TQTLSANLNIITTRQDFTSSMINTLSTGADNLTLADMNQEGANMLMLQTRQSLGTTALSL 259
Query: 439 VNNSTARILSLF 450
+ + IL LF
Sbjct: 260 SSQAAQSILRLF 271
>gi|291085836|ref|ZP_06354189.2| flagellar hook-associated protein 3 [Citrobacter youngae ATCC
29220]
gi|291069995|gb|EFE08104.1| flagellar hook-associated protein 3 [Citrobacter youngae ATCC
29220]
Length = 298
Score = 56.7 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/176 (10%), Positives = 57/176 (32%), Gaps = 3/176 (1%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
Q D++ +L V ++++G + +D+ + + AL I ++ +
Sbjct: 3 QSFNDLSSDLSHVVTQMATGKSILLPSDDPIAATRITELNRQQSALDQYQTNIDSATAGM 62
Query: 75 DIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
++ + + + I++ + G S+ +I + + +G
Sbjct: 63 SQQESILDGVNNDLLAIRDDLLEAANGTNTAESLSSLGQDIQSMTEAMVAALNYQDEDGH 122
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
+ +A G + D + V +D++ ++ +
Sbjct: 123 YVFGGTVNDRPPIVAVDDDGDGVTDSYSYQGNSEHRQTTVSNGVEVDTNVAVSDFF 178
Score = 38.2 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 16/134 (11%), Positives = 41/134 (30%)
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + + VDT D D +++ S+ +
Sbjct: 148 SYSYQGNSEHRQTTVSNGVEVDTNVAVSDFFGDSLDVLNTLTSLSKELQDPSVDPADPQV 207
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ + +D A+ IG + + + + + ++ + +L D D
Sbjct: 208 QSDIQNAIDTVDVASDELNASIATIGETQNTMTMLSGAQTDISTSNDQLISQLSDLDYGP 267
Query: 418 ESTRLSALQTQQQL 431
S + L+ Q
Sbjct: 268 ASITFTGLEMAMQA 281
>gi|291539431|emb|CBL12542.1| Flagellin and related hook-associated proteins [Roseburia
intestinalis XB6B4]
Length = 85
Score = 56.7 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 28/84 (33%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+ I+ A G++ ++ ++ + D D+ E + Q
Sbjct: 2 VQDAIEKAAGWRDDFGAVWEQLARAVKNADYTSQNTQQSESNIRDTDIGDEILGYTTNQI 61
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
+ L+ N+S +L L R
Sbjct: 62 LVNASQSLLAQYNSSKDAVLVLLR 85
>gi|315638380|ref|ZP_07893558.1| flagellin B family protein [Campylobacter upsaliensis JV21]
gi|315481508|gb|EFU72134.1| flagellin B family protein [Campylobacter upsaliensis JV21]
Length = 750
Score = 56.7 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/211 (11%), Positives = 69/211 (32%), Gaps = 3/211 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++ Q L + ++SSG+++ D+ ++A+ + ++ + L + +A
Sbjct: 10 TNSIQNTMSGASALNKLSMQLSSGMKIQDSYEDASIYIDNTRLEYELKTLEQIKEATSSA 69
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSS 127
+ + + ++ K K+T T ++I E+ +++ Q+ +A S
Sbjct: 70 KEMTSNSMKALQDMVKLLENFKVKVTQAASDSNSQTSREAIAKELEKIKEQIVQLANTSI 129
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
+ L + G + T Y + + + D ++
Sbjct: 130 NGQYLFAGAQLNHKPFDSKGNYFGDKNNVNVVTGAGTESPYNIPGFDLFFKADGDYQKQI 189
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+ + + D + +
Sbjct: 190 TTNESFTDNRYDLNKNPDKKQYLKGDNLWQD 220
Score = 45.9 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 28/317 (8%), Positives = 75/317 (23%), Gaps = 5/317 (1%)
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ ++++ S S + ++ + L TV
Sbjct: 426 IGNVSQVIQGTNAYATDDTKLSEVMSGNAMDSTLNLTVNSKGGNTYNVTVNLQNSTVSFP 485
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ + + + + F + N
Sbjct: 486 DPANPGQTITFPITHTNPATGNNGVVTPPNEITYRQINDIIGMFASDQVPTQTITPNNGQ 545
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
A+ + + T + ++ + N + + +
Sbjct: 546 ITNAQYDTLQKLMSDSKS-----TVNVTMDYRGRISVTDKLSTGTNIGVSLSDSQSGQFP 600
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
P + + + + + D+ K++D V R
Sbjct: 601 QPPYNHTANQVAGPDFSFNANNSLVIDEPNVDVIKDLDLMIEAVLSGNMRANADADNPRN 660
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
M+ + +D +G+ + I + + V+ ++ DAD
Sbjct: 661 TGMQGALERLDHLSDHINKLNTTMGAYHNNIDNVNTRVTFLGVNVQTLKTKVNDADYGET 720
Query: 419 STRLSALQTQQQLAVQA 435
L Q Q +++A
Sbjct: 721 LMNLMQTQLAYQASMKA 737
>gi|238919266|ref|YP_002932781.1| flagellar hook-associated protein 3, [Edwardsiella ictaluri 93-146]
gi|238868835|gb|ACR68546.1| flagellar hook-associated protein 3, putative [Edwardsiella
ictaluri 93-146]
Length = 311
Score = 56.7 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/179 (12%), Positives = 59/179 (32%), Gaps = 7/179 (3%)
Query: 8 HSAMSASQKLR---DINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
S+M Q + D + V ++ SG +V + +D+ S +
Sbjct: 4 SSSMIYQQNMNGVLDAQSEWQRVGAQLDSGKKVINPSDDPLAASQLVGLNQSKSMNEQYG 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA----GVERGTDSKSIQSEITQLQSQLR 120
A G + ++ + + +V+ + G + D +I ++++ +++QL
Sbjct: 64 MARGYARESTSMEESVLQQVTNVLQNATPVLVDGMSSGTKSDEDRAAIATQLSSMRNQLL 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++A + NG ++ + ++ + + D
Sbjct: 124 NLANSTDGNGRYIFAGYKSNAEPFVKEASGEIKYVGGKKALTQQVDAARTMIVSHTGDH 182
Score = 40.1 bits (91), Expect = 0.78, Method: Composition-based stats.
Identities = 11/122 (9%), Positives = 40/122 (32%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ D + + +KD+ + + + + + + D A+ E + +
Sbjct: 173 TMIVSHTGDHVFKSDNGKKDIFAALQKAITALNQPLDKATDADKAKVAQALNEANTGLRA 232
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ + ++G+ + + + + + + L D + + + Q Q
Sbjct: 233 SLDNVSKVRAELGTQLNELDSLDAIGEENAITFKTRISGLQDVNWTQAISDYTFRQVSLQ 292
Query: 431 LA 432
+
Sbjct: 293 AS 294
>gi|73762210|gb|AAZ83593.1| Fla [Borrelia afzelii]
Length = 151
Score = 56.7 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 10/99 (10%), Positives = 30/99 (30%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPTPATAPTQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 112
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ + + ++ ++ DA M E + Q A
Sbjct: 113 NSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSA 151
>gi|47566122|ref|ZP_00237160.1| flagellar hook-associated protein flgL, putative [Bacillus cereus
G9241]
gi|47557039|gb|EAL15369.1| flagellar hook-associated protein flgL, putative [Bacillus cereus
G9241]
Length = 287
Score = 56.3 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 54/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + ++ + + + + E+ + +++ I
Sbjct: 63 QKDIADSRNVLSQTENTLQGIVKSLTRVDQLTIQALNGT----NSEKELKSIGTEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + S K G+ +
Sbjct: 119 EHVVYLANTKEQGRYLFGGDSADKPPFTKNGTYQGGEKDVMWKLNDGY 166
>gi|291531968|emb|CBK97553.1| Flagellin and related hook-associated proteins [Eubacterium siraeum
70/3]
Length = 331
Score = 56.3 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/301 (9%), Positives = 72/301 (23%), Gaps = 11/301 (3%)
Query: 8 HSAMSASQKLRDINYNLEV---VQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
+M+ + + +N LE + +++S R + A+++ + A + +
Sbjct: 4 TQSMTNRRYMSQLNAALERKNASERKINSTKRYNRASEDPISAAKALRTRKAISNTNDYL 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLRD 121
+ + A + + D++ I K+T + + ++
Sbjct: 64 GNLETAEQIYNGADSVLMNVNDILDNIIEKVTYAANGTQHDEDEEILAQTVETFADEIVR 123
Query: 122 -----IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
IA F G N T A K++ + + ++ +
Sbjct: 124 LFNTDIAERRIFGGVNNDTTVFKIENAGGKKTITYNGVDINSIDDPDKFPYSESSFTDIG 183
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
D + + S I A K
Sbjct: 184 TGMVIDPATGRVDPQSALPVTFNGAKITGCGKDDEGDSKNIIQITLDAAQAVREGDKIKA 243
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
+ A V + A + + N + +
Sbjct: 244 MDYIDKLRAAQTSVSVAHADIGNKQEYIEYNKNRLTNNMETLLEQQNNLEGTDMGAETTN 303
Query: 297 I 297
Sbjct: 304 W 304
Score = 39.0 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 25/65 (38%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+K+ + + + + A IG+ I ++ + + + + L DM
Sbjct: 239 DKIKAMDYIDKLRAAQTSVSVAHADIGNKQEYIEYNKNRLTNNMETLLEQQNNLEGTDMG 298
Query: 417 SESTR 421
+E+T
Sbjct: 299 AETTN 303
>gi|226327735|ref|ZP_03803253.1| hypothetical protein PROPEN_01608 [Proteus penneri ATCC 35198]
gi|225203439|gb|EEG85793.1| hypothetical protein PROPEN_01608 [Proteus penneri ATCC 35198]
Length = 302
Score = 56.3 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 52/165 (31%), Gaps = 4/165 (2%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+ +++SSG RV +D+ S A ++K + A G + +
Sbjct: 3 NITGSQSKWMTEGNKISSGRRVEKPSDDPMAASQAVMVKQSESRNQQYATARGFAKNSMS 62
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVE----RGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
+ + S+ +++ + I+ + A D S+ ++ L+ QL I G
Sbjct: 63 LQMSLASQMVNITTKIQETLVAAGNDATLSDEDRSSLADQLQGLKDQLVGIGNTKDGVGR 122
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+A + + + ++
Sbjct: 123 YIFAGFQSDKPPFVADATGKIIYQGGDKQITQKVDSNIEMTTNFT 167
>gi|291558292|emb|CBL35409.1| Flagellin and related hook-associated proteins [Eubacterium siraeum
V10Sc8a]
Length = 331
Score = 56.3 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/301 (9%), Positives = 72/301 (23%), Gaps = 11/301 (3%)
Query: 8 HSAMSASQKLRDINYNLEV---VQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
+M+ + + +N LE + +++S R + A+++ + A + +
Sbjct: 4 TQSMTNRRYMSQLNAALERKNASERKINSKKRYNRASEDPISAAKALRTRKAISNTNDYL 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLRD 121
+ + A + + D++ I K+T + + ++
Sbjct: 64 ANLETAEQIYNGADSVLMNVNDILDNIIEKVTYAANGTQHDEDEEILAQTVETFADEIVR 123
Query: 122 -----IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
IA F G N T K++ + + ++ +
Sbjct: 124 LFNTDIAERRIFGGVNNDTTVFKIENVGGKKTITYNGVDINSIDDPDKFPYSESSFTDIG 183
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
D + + S I A K
Sbjct: 184 TGMVIDPATGRVDPQSALPVTFNGAKITGCGKDDEGDSKNIIQITLDAAQAVREGDKIKA 243
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
+ A V + A + + + N + +
Sbjct: 244 MDYIDKLRAAQTSVSVAHADIGNKQEYIEYNTNRLTNNMETLLEQQNNLEGTDMGAETTN 303
Query: 297 I 297
Sbjct: 304 W 304
Score = 40.5 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 29/84 (34%), Gaps = 4/84 (4%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+K+ + + + + A IG+ I + + + + + L DM
Sbjct: 239 DKIKAMDYIDKLRAAQTSVSVAHADIGNKQEYIEYNTNRLTNNMETLLEQQNNLEGTDMG 298
Query: 417 SESTRLSAL----QTQQQLAVQAL 436
+E+T L QLA +
Sbjct: 299 AETTNWKTLEAIYNVSLQLASSVI 322
>gi|239835981|gb|ACS29285.1| flagellin protein [Borrelia burgdorferi]
Length = 213
Score = 56.3 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/189 (8%), Positives = 49/189 (25%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 25 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 84
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 85 IYAANVANLFSGEGAQTAQAAPVQEGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 144
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E +
Sbjct: 145 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDEVVAAT 204
Query: 424 ALQTQQQLA 432
Q A
Sbjct: 205 TNSILTQSA 213
>gi|317052130|ref|YP_004113246.1| hypothetical protein Selin_1963 [Desulfurispirillum indicum S5]
gi|316947214|gb|ADU66690.1| hypothetical protein Selin_1963 [Desulfurispirillum indicum S5]
Length = 1509
Score = 56.3 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/366 (5%), Positives = 81/366 (22%), Gaps = 6/366 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ +N +++ + + +++ + ++ S A ++ +
Sbjct: 3 VTSNMLSLNFLGGINQSLNRMLENNQQIAKNRTLLAPNNDPVRISQALSFQNSIDLFTQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI----TAGVERGTDSKSIQSEITQLQSQL 119
I + ++++ + ++ KN + K++ +++ ++++L
Sbjct: 63 QRNISNAQTWLNLSDGSLQSMSSILQMAKNNYALAGASDSMSPDARKALANDVEAMRNEL 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ + + K I + + Y L
Sbjct: 123 ISLGNTKHLDRYIFGGYQTRDEPFQERKQEIEIIRQGSY--IGTAGAGLYTKGVFSDLPE 180
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
G + + + +V S +
Sbjct: 181 LPKGDYEILISYDENSKVATVSMTDSQGRAVSLDSNGSDNSGNGKMNNLTTVSRYQVNPG 240
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
D + + +P + + + + +
Sbjct: 241 DFIDTGRGVAIEIPKGFTGGQRIQFSYSPGDSLSYLGDDGLMKAQVGVNDQVNLNVPGNN 300
Query: 300 DPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL 359
T + + + G ++ N +
Sbjct: 301 IFSQTAKQIETTFVNFANGAPIKNITLFKDIDNANVQKGDTISFNGFDHSGNRIGAARIM 360
Query: 360 AMEEMV 365
+ + +
Sbjct: 361 SPKAAL 366
>gi|242238976|ref|YP_002987157.1| flagellar hook-associated protein 3 [Dickeya dadantii Ech703]
gi|242131033|gb|ACS85335.1| flagellar hook-associated protein 3 [Dickeya dadantii Ech703]
Length = 312
Score = 56.3 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/224 (11%), Positives = 70/224 (31%), Gaps = 3/224 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T Q + + + ++S+ +V+ +D+ + A I+ + +
Sbjct: 3 LSTAIIYKQNQQSVSNSYSRYQESSVQLSNLQKVNSPSDDPVASAQAVILAQTQASSAQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ + S+ + + + + DV+ I+ I TD +S+++E+ + QL
Sbjct: 63 ATSRSSASNSLKLETTTLDQVTDVIQNIQTLIVEAGDTTYSDTDRQSLKTELQGYKDQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+A + NG + + + G + + D+
Sbjct: 123 GLANSTDSNGNYIFAGYKTDTAPFSEDTTSDPSVISYVGSDTAISQKVDASRTMTVGDTG 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
D N ++ + + + T +
Sbjct: 183 DDVFGDIFTHINNVLDALDISLDDTNGDNTNMDTYTAALGTATT 226
>gi|239628959|ref|ZP_04671990.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239519105|gb|EEQ58971.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 327
Score = 56.3 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/205 (11%), Positives = 61/205 (29%), Gaps = 2/205 (0%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
L+ NL +++S + + +++ A S A ++ + + + +++
Sbjct: 15 NLQRNISNLASSNLKLASQRQYNHVSEDPATASKAFAIRDQIARTEEHINVVKNATGELE 74
Query: 76 IAKAGMSKAIDVMSTIKNKITAG--VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
A + + ++ I K T +I E++ +L + +
Sbjct: 75 TADSNILTLNSILENIYEKATKAGGASSQDSMDAIAEELSGQMEELLQTMNARYGDKFLF 134
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
+ G++ ++ F D Y + GT G
Sbjct: 135 SGSANGTAPFTLDADGNLLFNGKSVDAYDKNDPDTYFSENKPVYLDIGFGTYATGTNTAK 194
Query: 194 HKIKVEPQVLKDIDVSVYDASGTIS 218
IK+ + + + +
Sbjct: 195 TGIKISTSGVDVLGCGKDENGMPNN 219
>gi|242309962|ref|ZP_04809117.1| flagellin [Helicobacter pullorum MIT 98-5489]
gi|239523259|gb|EEQ63125.1| flagellin [Helicobacter pullorum MIT 98-5489]
Length = 251
Score = 56.3 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 48/146 (32%), Gaps = 9/146 (6%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN S L E ++SS + + A +IA + + ++S
Sbjct: 8 NTNES----LINLNKAKEEEEKALQKISSPRPIEST--DGASLAIANALLAQANSMSQGI 61
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRD 121
+ IA +S D I A + IQ+E T L + D
Sbjct: 62 RNANDALGVLQIADGTLSTLTDSAIQINELSVALGNPALNSSQRAMIQNEATALTQSMND 121
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
++FNG+N + T + +
Sbjct: 122 AVSQATFNGKNVFSGQMSFVTGNGTE 147
Score = 40.9 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 42/143 (29%)
Query: 305 NSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM 364
+ + T + + S VT N T N A N
Sbjct: 104 QRAMIQNEATALTQSMNDAVSQATFNGKNVFSGQMSFVTGNGTESINLQAPNTANLSVNN 163
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
I I+ + IG+ + I + ++ G L+D D+A L+
Sbjct: 164 QQSILDFIEQVGMSRADIGAAMNGIQSGINSSMNTVVNLKAAEGNLLDDDLAENYNELNT 223
Query: 425 LQTQQQLAVQALSIVNNSTARIL 447
+ + A+ A S N L
Sbjct: 224 AKLKANAALYAASFNNQYLQSRL 246
>gi|170737045|ref|YP_001778305.1| flagellar hook-associated protein 3 [Burkholderia cenocepacia
MC0-3]
gi|169819233|gb|ACA93815.1| flagellar hook-associated protein 3 [Burkholderia cenocepacia
MC0-3]
Length = 304
Score = 56.3 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 53/168 (31%), Gaps = 3/168 (1%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
LR N + ++S+G RV A+D+ + +++ D L I S +
Sbjct: 13 LATLRASNSKAADLTSKISTGQRVQRASDDPIAAARLLLIERDTSVLQRYQKNIDTLSVR 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI---ARGSSFNG 130
+ + + +D + + + + + + + + + L+ +L ++ A +G
Sbjct: 73 LQKNEVHLDGMLDTVMAVHDSLLSAADGSRSAADLNALAAPLRMRLNNLKQAANAKDGDG 132
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
++ + R T +
Sbjct: 133 NFLFSGSQTNTAPIAYDATAPVGSRYSYAGNGELQQVVIGHGVTQHAN 180
>gi|304558599|gb|ADM41263.1| Flagellar hook-associated protein FlgL [Edwardsiella tarda FL6-60]
Length = 311
Score = 56.3 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/178 (10%), Positives = 55/178 (30%), Gaps = 7/178 (3%)
Query: 8 HSAMSASQKLR---DINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
++M Q + D + + ++ SG +V + +D+ S +
Sbjct: 4 STSMIYQQNMSGVLDAQSEWQRIGAQLDSGKKVINPSDDPLGSSQLVGLNQAKSMNEQYG 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA----GVERGTDSKSIQSEITQLQSQLR 120
A G + ++ + + +V+ + G + D +I +++ ++ QL
Sbjct: 64 MARGYARQSTSMEESVLQQVTNVLQNATPVLVDGMSSGTKSDDDRAAIATQLESMRDQLL 123
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
++A + NG + + + + + +
Sbjct: 124 NLANSTDGNGRYIFAGYKSDAAPFTKGAASEVTYSGGDKALTQQVDAARTMTVSHTGN 181
Score = 40.5 bits (92), Expect = 0.62, Method: Composition-based stats.
Identities = 8/127 (6%), Positives = 33/127 (25%)
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ + +D+ + + + + ++ +
Sbjct: 173 TMTVSHTGNQVFQPGKGEQDIFASLQQAIDALKTPLEGKDDAAKKAVSDDLDSANRGLRN 232
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
+ + ++G+ + + + + + + D D + S Q Q
Sbjct: 233 SLNNVSRVRAELGTQLNELDSLDAIGDENAITYKTRISSVQDVDWTQAISDYSFRQVSLQ 292
Query: 431 LAVQALS 437
+ + S
Sbjct: 293 ASYKVFS 299
>gi|89145664|gb|ABD62021.1| Fla [Borrelia burgdorferi]
Length = 151
Score = 56.3 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 10/99 (10%), Positives = 32/99 (32%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GVQQPTPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMVSDQRANLGAFQNRLESIK 112
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ + + ++ ++ DA M E + Q A
Sbjct: 113 NSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSA 151
>gi|223039734|ref|ZP_03610019.1| bacterial flagellin N-terminus domain protein [Campylobacter rectus
RM3267]
gi|222878926|gb|EEF14022.1| bacterial flagellin N-terminus domain protein [Campylobacter rectus
RM3267]
Length = 775
Score = 55.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/324 (6%), Positives = 67/324 (20%), Gaps = 11/324 (3%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ L + ++SSGL++ ++ ++++ ++ + + L V A
Sbjct: 41 QTNMKALYKLNTQISSGLKIQNSFEDSSVYNDGMRLDYEVATLEQVQTATSKAQHFSKNT 100
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+S+ + K K+ G S ++ IA + +
Sbjct: 101 DKALSEFKQQLERFKTKLVQGANEIHSQTSREA-----------IANDLQGIKNHLVNIA 149
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
S + + NG+ + + + L
Sbjct: 150 NTSINGQFLFAGSAINTKPINGETNEYYGNAQSMKAVGGAQVNLTYNQNGHELFLGKDGD 209
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
++ + + + T + ++
Sbjct: 210 YAKKITSNTMLKAQNLDDKNKTVYIDSEHKMRDLIGFKYVKDEKTLSNQDFTGTGVKRFQ 269
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
S + + + + +
Sbjct: 270 DTTFFLQGKKPNGTSFTSKFKMTSDASINDLLEKIGTEYGNTPNNKVVDVTINNQGQINV 329
Query: 318 VDTESTTLDSRKDLPKEIDSGYSM 341
D + +
Sbjct: 330 KDLSKGNQVIDFHMIAATKKVANA 353
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 35/356 (9%), Positives = 76/356 (21%), Gaps = 16/356 (4%)
Query: 95 ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFI 154
++ + ++Q+ ++ + + I G +
Sbjct: 433 VSQVERGSGKFADDNTTLSQVVGADPNLPNSLYDGERDKYNINGQELKMQIKSKGGGDYK 492
Query: 155 RDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDAS 214
D + T + N +D
Sbjct: 493 VDIKFGAGAPPTTSGNATIKITRPDGTTYETKVWDSFYNDTTNPPTTEGRDTKSKDMTFR 552
Query: 215 GTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVA 274
+ + A A A + K +V
Sbjct: 553 QLNDIIGMVASDSVPAGAGGNTPADYMAYKQAIANSQGSVEAHMDHRGRIKVTDKQNAVT 612
Query: 275 ASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKE 334
I G + + ++ S V VD + +
Sbjct: 613 PMKVGIYDGKNVDKFDGDSTTMQGKGSLWSFSANNGVEIDSPSVDIFEDLDRMIEAVRSG 672
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
S ++ + ID + K+G+ S+ +
Sbjct: 673 QYRADSEGEHPRNS-----------GIQGAIERIDHIADHVSKIHTKVGAQSAALTDTNT 721
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+M V+ + +AD L Q +Q+++ +N LSL
Sbjct: 722 RASVMEVNVKTVKADITNADYGETYMNLMQKMMSYQAMLQSVAKINQ-----LSLL 772
>gi|304413529|ref|ZP_07395002.1| lateral flagellin [Candidatus Regiella insecticola LSR1]
gi|304284372|gb|EFL92765.1| lateral flagellin [Candidatus Regiella insecticola LSR1]
Length = 304
Score = 55.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 46/134 (34%), Gaps = 7/134 (5%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
++ +A +RD N + + D+V+ R ++ I MK+ +
Sbjct: 30 ITSTNAHAAIRDSNKEMNIASDKVARNSRNLSPSEE----QILNGMKAAASGTRVTLRNL 85
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIAR 124
+S + K + + ++ + + + + E +L QL I
Sbjct: 86 SDATSMLQTMKGELEEVGAIIVKMDDLALQAANDTFSAEEKAAQTKEFNKLGEQLESIFE 145
Query: 125 GSSFNGENWLRTDL 138
S++ E L D
Sbjct: 146 KSNYRNEKILSEDG 159
Score = 42.0 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 5/91 (5%), Positives = 24/91 (26%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + + + ++ + + + + + L ++
Sbjct: 208 AAADVPAKAIDILSKARQQLGNIRAELSVNINLLGHITNSVNNTLKSNTDSQSNLTAINL 267
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARI 446
A E L+++ L+ + +
Sbjct: 268 AEEMENFHNAMQNNDLSLKMLAKKQEAQQSL 298
>gi|73762214|gb|AAZ83595.1| Fla [Borrelia lusitaniae]
gi|73762216|gb|AAZ83596.1| Fla [Borrelia lusitaniae]
Length = 151
Score = 55.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 12/99 (12%), Positives = 31/99 (31%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + +S I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPAPATAPSQGGVNSPINVTTTVDANTSLSKIENAIRMVSDQRANLGAFQNRLESIK 112
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
D + + ++ ++ DA M E + Q A
Sbjct: 113 DSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSA 151
>gi|228933023|ref|ZP_04095886.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228826624|gb|EEM72395.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 287
Score = 55.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/168 (10%), Positives = 54/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLFMSEDPLAASKSFAIQHSLANMEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + ++ + + + E+ + +++ I
Sbjct: 63 QKDIADSKNVLTQTETALQGVLKSVTRADQLAVQALNGP----NGEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + SI K G +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSIEKPPFTEDGTYQGGPNDVNWQLNDGY 166
>gi|325111106|ref|YP_004272174.1| flagellin domain protein [Planctomyces brasiliensis DSM 5305]
gi|324971374|gb|ADY62152.1| flagellin domain protein [Planctomyces brasiliensis DSM 5305]
Length = 743
Score = 55.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/196 (12%), Positives = 69/196 (35%), Gaps = 3/196 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
+ Q L ++ +QD++S+GL+ + +N + +++ + +
Sbjct: 18 TRSLQNLDRVSSEYLRLQDQISTGLKFQNIGENPSAAIQTIVLQQSLERNEQLQSNVETN 77
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSS 127
S + + + DV + ++ I AG+ G ++ + +E+ L + +I+ +
Sbjct: 78 RSLLTATEQALGDIGDVFNQMQTFILAGLGDGSSPSEKAQMANEVDTLIQHVVNISNSTF 137
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
+ + ++ SI+K+ D + L V +
Sbjct: 138 RGRYLFGGSQNTAAPFSISKTDQAVRFNGDLESISSYVSLDNLLGNNVSAGDTLRPLAEV 197
Query: 188 GLLDRNHKIKVEPQVL 203
D + + ++
Sbjct: 198 DGTDIDPALVGSTKIS 213
Score = 40.1 bits (91), Expect = 0.69, Method: Composition-based stats.
Identities = 12/126 (9%), Positives = 37/126 (29%), Gaps = 1/126 (0%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS-FIDTQI 372
+ T + + + +++ +T + E + +D +
Sbjct: 608 VSTGLGINGTEDGVVPIDGTDPNQQRADGVIDLLFRLSTALRSGDNQSLEAIDRKLDAHL 667
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ G + + + + +++ + + DM + T + LQ Q
Sbjct: 668 QEFNYQRGSVAGRLRSLDEYANSLADQDLVIQEAIVEVFHTDMPAAITEYTNLQVSIQAT 727
Query: 433 VQALSI 438
Q +
Sbjct: 728 QQIAAQ 733
>gi|225849063|ref|YP_002729227.1| flagellar hook-associated protein 3 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643079|gb|ACN98129.1| flagellar hook-associated protein 3 [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 313
Score = 55.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/206 (9%), Positives = 61/206 (29%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
+E ++++G+++ +D+ A +K+ N + + ++ +D A+
Sbjct: 20 QNEIEKYTRQIATGIKLLSPSDDTVGTVSALRLKTINEDIERYGRNMDFVNTILDSAETQ 79
Query: 81 MSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGS 140
++ ++ +I + G K + ++D + G
Sbjct: 80 LNSIAAAGQEVRVEIVRLLNTGVLDKEDAKVLRDYFVNMKDYIIKQANFKIGDTALFGGV 139
Query: 141 STASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
T + + G++ + T L+ + ++ K+
Sbjct: 140 KTQTDPFAPDGTYQGETVETKVPTAPGVELNTTFNGRVYLGVNNDTNKMILTETIDKIVN 199
Query: 201 QVLKDIDVSVYDASGTISTKKFKLAT 226
+ I + +T
Sbjct: 200 IIDNAISGTGSLGDLNTATISVNGKN 225
Score = 53.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 27/86 (31%), Gaps = 5/86 (5%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ D + IG+ I + + + + +L D D+A T L
Sbjct: 229 LEAFDIGLNTVMQYRSVIGTQVKTIQDLKTINDQNKVFNKDLISKLEDVDVAEAITNLQK 288
Query: 425 LQTQQQLAVQALSIVNNSTARILSLF 450
Q Q + N + LSL
Sbjct: 289 AQVAYQALISVF---NQNRQ--LSLL 309
>gi|49184567|ref|YP_027819.1| flagellar hook-associated protein [Bacillus anthracis str. Sterne]
gi|65319006|ref|ZP_00391965.1| COG1344: Flagellin and related hook-associated proteins [Bacillus
anthracis str. A2012]
gi|227815504|ref|YP_002815513.1| putative flagellar hook-associated protein FlgL [Bacillus anthracis
str. CDC 684]
gi|254683227|ref|ZP_05147088.1| putative flagellar hook-associated protein FlgL [Bacillus anthracis
str. CNEVA-9066]
gi|254734580|ref|ZP_05192292.1| putative flagellar hook-associated protein FlgL [Bacillus anthracis
str. Western North America USA6153]
gi|254740988|ref|ZP_05198676.1| putative flagellar hook-associated protein FlgL [Bacillus anthracis
str. Kruger B]
gi|254755231|ref|ZP_05207265.1| putative flagellar hook-associated protein FlgL [Bacillus anthracis
str. Vollum]
gi|254759767|ref|ZP_05211791.1| putative flagellar hook-associated protein FlgL [Bacillus anthracis
str. Australia 94]
gi|49178494|gb|AAT53870.1| flagellin, N-terminus [Bacillus anthracis str. Sterne]
gi|227003631|gb|ACP13374.1| putative flagellar hook-associated protein FlgL [Bacillus anthracis
str. CDC 684]
Length = 207
Score = 55.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 55/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLTNIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + ++ + + + + E+ + ++L +
Sbjct: 63 QKDIADSRNVLSQTENTLQSIVKSLTRVDQLTIQALNGT----NSEKELKAIGAELDQLV 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G+ +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEKPPFTDDGTYQGGENDVMWKLNDGY 166
>gi|323492331|ref|ZP_08097484.1| flagellar hook-associated protein FlgL [Vibrio brasiliensis LMG
20546]
gi|323313378|gb|EGA66489.1| flagellar hook-associated protein FlgL [Vibrio brasiliensis LMG
20546]
Length = 298
Score = 55.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 49/143 (34%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + Q L+ N L V ++++ R++ +D+ + + A++
Sbjct: 3 ISDTQFSQMMLQSLQLNNAGLGQVMQQMATSDRLTKLSDDPMASIQLLNLDREGSAINQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + + +I + + G IT+L+S I
Sbjct: 63 QSNIANVKTALSSQEVHLDSVNESLKSINDLVLWGANGTLTDDDRVGIITELESLRSSIV 122
Query: 124 RGSSFNGENWLRTDLGSSTASIA 146
+ E G+ T + A
Sbjct: 123 SSFNAQDEEGRYLFSGTKTDTAA 145
>gi|90577351|ref|ZP_01233162.1| flagellar hook-associated protein [Vibrio angustum S14]
gi|90440437|gb|EAS65617.1| flagellar hook-associated protein [Vibrio angustum S14]
Length = 299
Score = 55.9 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 44/133 (33%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
+ L N L V ++S+G R+ +DN + +N A+S D I
Sbjct: 9 SQLMLTSLSKNNQGLGEVLAQMSTGQRLLKLSDNPIDSINLLNLDRENSAISQYQDNISN 68
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFN 129
+ + + + A D + +++ + +S +L S +
Sbjct: 69 VKTALSSQEVHLMAASDTLKDMRDTLLLASNGAISDADRESYANKLVSLRDAFMSSFNVQ 128
Query: 130 GENWLRTDLGSST 142
E G+ +
Sbjct: 129 DEEGNYLFSGTQS 141
>gi|259908805|ref|YP_002649161.1| Flagellar hook-associated protein 3 [Erwinia pyrifoliae Ep1/96]
gi|224964427|emb|CAX55936.1| Flagellar hook-associated protein 3 [Erwinia pyrifoliae Ep1/96]
gi|283478786|emb|CAY74702.1| Flagellar hook-associated protein 3 [Erwinia pyrifoliae DSM 12163]
gi|310767297|gb|ADP12247.1| Flagellar hook-associated protein 3 [Erwinia sp. Ejp617]
Length = 321
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/213 (10%), Positives = 59/213 (27%), Gaps = 3/213 (1%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
Q ++ N + + +++G RV+ +D+ + A ++ S A +
Sbjct: 14 QGIQSANSSWLKAGNELATGNRVNKPSDDPVAAAQAVVLSQAQSETSQYETARVFATQNQ 73
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
+ + + DV+ + + + A G D S +++ ++ QL ++A + NG
Sbjct: 74 STEETTLKQVADVVISAQTTVVAASTGTLSGEDRASYATQLEGIRGQLLNLANSTDGNGR 133
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
+ + N + D + +
Sbjct: 134 YMFAGYQSDKAPFTSDAGGKVTYIGGNVPIAQKVDASRTLVTNHTGKQVFDSLTSDAVKE 193
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
+ K +
Sbjct: 194 PDGAASESNIFTILDTAIKSLKVSLTGADKATV 226
>gi|209967002|ref|YP_002299917.1| flagellar hook-associated protein 3 FlgL, putative [Rhodospirillum
centenum SW]
gi|209960468|gb|ACJ01105.1| flagellar hook-associated protein 3 FlgL, putative [Rhodospirillum
centenum SW]
Length = 492
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/486 (10%), Positives = 121/486 (24%), Gaps = 43/486 (8%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+SI T + + +Q ++S+G + + + + ++ +
Sbjct: 1 MSSIATLTQYTRILRDTGLVKQQETDLQRQLSTGYKTDVYSGLGIDAARSVNLRETASRI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS-KSIQSEITQLQSQL 119
++ I L ++ ++ M + +++++ + + ++ Q Q+
Sbjct: 61 TSYQRNIDLVQARTEVLDTAMQRVGSLVTSVISDLNKLDGTTISDPTVVRDNARQALDQI 120
Query: 120 RDIARGS------------------------------SFNGENWLRTDLGSSTASIAKSV 149
+ N +
Sbjct: 121 YSLLNTQVEGRYVFAASDETTPPVNDLTGLIDTYDRFYTAYLNAPAGAATRLDFDGDGTT 180
Query: 150 IGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
IG + + + V
Sbjct: 181 IGDADDALATGPTPADSQFVFNGVGPEGGAFVFDVTGTPPPAPGDSYSVTLNGTTFTTTV 240
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANA----------TFDQAKGIATIPVPLPAAPAAP 259
V T L A ++ +A +P A A+
Sbjct: 241 VGGGIDTTEEIVADLRAQIQADPAFSSYVVLDEDLDAAANSRAMLRIQVPEDFATATASG 300
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ ++ D + + A D
Sbjct: 301 AGPGANLTRVPSDIEQLNLAMQRVVRDPALAYDPGMDGVGTLYSSTLRYANAPMVARVDD 360
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKL--AMEEMVSFIDTQIKCATA 377
T R D + + + + + A+ + T K
Sbjct: 361 NLDVTYGVRADASYFRNIIQGLAMVANLERPDDPEIRSRYYDALHSARDMLQTGSKDLNT 420
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
A +G++ + E K + V VG + +AD+A+ +TRL+ +TQ Q + ++
Sbjct: 421 AVASVGAVRRNLDQLEVKHKAVLGIVNTNVGEIEEADIATVATRLNLAETQLQAGYRTIA 480
Query: 438 IVNNST 443
+N ++
Sbjct: 481 SLNKTS 486
>gi|73762206|gb|AAZ83591.1| Fla [Borrelia burgdorferi]
gi|89145662|gb|ABD62020.1| Fla [Borrelia burgdorferi 297]
Length = 151
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 11/99 (11%), Positives = 31/99 (31%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 112
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
D + + ++ ++ DA M E + Q A
Sbjct: 113 DSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSA 151
>gi|73762212|gb|AAZ83594.1| Fla [Borrelia spielmanii]
Length = 151
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/149 (9%), Positives = 38/149 (25%)
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
S N + + + T +
Sbjct: 3 TSWTLRVHVGANQDEAIAVNIYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPTPATA 62
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
+ + + ++ I+ I+ + +G+ +R+ +D + + +
Sbjct: 63 PSQGGVNSPVNVTTTVDANTSLAKIENAIRMVSDQRANLGAFQNRLESIKDSTEYAIENL 122
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLA 432
+ ++ DA M E + Q A
Sbjct: 123 KASYAQIKDATMTDEVVAATTNSILTQSA 151
>gi|42780832|ref|NP_978079.1| flagellar hook-associated protein FlgL [Bacillus cereus ATCC 10987]
gi|42736752|gb|AAS40687.1| flagellar hook-associated protein FlgL, putative [Bacillus cereus
ATCC 10987]
Length = 287
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/168 (10%), Positives = 55/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQLMDLNAQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + +S + ++ + + + E+ + +++ I
Sbjct: 63 QKDIADSKNVLSQTENTLSGIVKSLTRADQLTIQALNGP----NGEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G+ +
Sbjct: 119 KQVVYLANTKEQGRYLFGGDSAEKPPFADDGTYQGGEKDVMWKLNDGY 166
>gi|89145694|gb|ABD62036.1| Fla [Borrelia genomosp. 1]
gi|89145696|gb|ABD62037.1| Fla [Borrelia genomosp. 1]
Length = 151
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 11/99 (11%), Positives = 31/99 (31%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPTPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 112
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
D + + ++ ++ DA M E + Q A
Sbjct: 113 DSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSA 151
>gi|213622268|ref|ZP_03375051.1| flagellar hook-associated protein FlgL [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 168
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + +++S+G RV++ +D+ S A ++ S
Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLFQAQAQNSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ A + KV + ++ +S+ + T + KI G D S+ +++ ++ QL
Sbjct: 63 ALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLM 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
++A + NG +
Sbjct: 123 NLANSTDGNGRYIFAGYKTEAAPFDQA 149
>gi|94495404|ref|ZP_01301984.1| Flagellin-like protein [Sphingomonas sp. SKA58]
gi|94424792|gb|EAT09813.1| Flagellin-like protein [Sphingomonas sp. SKA58]
Length = 281
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 61/142 (42%), Gaps = 4/142 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ ++ + ++ ++ Q +S+G+ ++ +DNA W +
Sbjct: 1 MVGI-TNKIMLAEMRRQQKLSQSIVDGQTAISTGITLNKPSDNALAWVQVSDIGRAQAQQ 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQS 117
+A + G+++ A++ +S+ +++ + +T+ T +I E+ +++
Sbjct: 60 AAWQANVNYGTTRAATAESNLSEINSLLTRAQELVTSARNGSLNDTSRAAIVEELGTIRT 119
Query: 118 QLRDIARGSSFNGENWLRTDLG 139
+ ++ + + G
Sbjct: 120 TIDEMLNQTDYQGTPVFDDGQS 141
Score = 43.6 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 22/269 (8%), Positives = 69/269 (25%)
Query: 173 ETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWL 232
++ + ++ + + + + + A +S A +
Sbjct: 5 TNKIMLAEMRRQQKLSQSIVDGQTAISTGITLNKPSDNALAWVQVSDIGRAQAQQAAWQA 64
Query: 233 KAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT 292
T A + + A + + +A +G +
Sbjct: 65 NVNYGTTRAATAESNLSEINSLLTRAQELVTSARNGSLNDTSRAAIVEELGTIRTTIDEM 124
Query: 293 TKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANT 352
+ + + + ++ +++ + ++ +
Sbjct: 125 LNQTDYQGTPVFDDGQSTLVPVSRGLNLAVVGTRQEVSEGIDVNGAPMSINDVLSASISA 184
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
+ + + T K G S R+ + D + + + + L
Sbjct: 185 IQSGVDADIATSLDGVKAAQAHITVEQAKQGVRSDRLEVIGDRLTDVDIDLTERRADLES 244
Query: 413 ADMASESTRLSALQTQQQLAVQALSIVNN 441
D+ +RL + Q + A A + +N
Sbjct: 245 TDLQQVISRLQSQLLQLEAAQSAYARINQ 273
>gi|89145670|gb|ABD62024.1| Fla [Borrelia burgdorferi]
Length = 151
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 10/99 (10%), Positives = 31/99 (31%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMVSDQRANLGAFQNRLESIK 112
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ + + ++ ++ DA M E + Q A
Sbjct: 113 NSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSA 151
>gi|89072307|ref|ZP_01158886.1| flagellar hook-associated protein [Photobacterium sp. SKA34]
gi|89051839|gb|EAR57291.1| flagellar hook-associated protein [Photobacterium sp. SKA34]
Length = 299
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/218 (13%), Positives = 66/218 (30%), Gaps = 3/218 (1%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
+ L N L V ++S+G R+ +DN + +N A++ D I
Sbjct: 9 SQLMLTSLSKNNQGLGEVLAQMSTGQRLLKLSDNPIDSINLLNLDRENSAINQYQDNISN 68
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKN---KITAGVERGTDSKSIQSEITQLQSQLRDIARGS 126
+ + + + A D + +++ + G D +S +++ L+
Sbjct: 69 VKTALSSQEVHLMAASDTIKDMRDSLLLASNGALSDADRESYANKLVSLRDAFMSSFNVQ 128
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
G A ++ G ++ K +T D
Sbjct: 129 DEEGNYLFSGTQSDVPAITSQPAGGYIFEGNSDKRVVTVAKGVTMEANFASQEILDLGGN 188
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
L + I +I+ ++ T+ T +
Sbjct: 189 NILNQIDAAITELQAPTVNINNTLQATLNTLDTTHDNV 226
>gi|162421086|ref|YP_001606479.1| flagellar hook-associated protein 3 [Yersinia pestis Angola]
gi|162353901|gb|ABX87849.1| flagellar hook-associated protein 3 [Yersinia pestis Angola]
Length = 248
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 54/184 (29%), Gaps = 6/184 (3%)
Query: 8 HSAMSASQKLRDINYNLE---VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
++M Q ++ I ++S+G RV + +D+ S A ++ S +
Sbjct: 4 STSMLYQQNMQGITNAQSLWMQTGQQLSTGKRVVNPSDDPMAASQAVMVSQAESENSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
A + +++ + +I++ + + D S +++ L+ QL +
Sbjct: 64 LARSFARQSSSLETTVLAQTTSTIQSIQSLVISAKNDTLSDDDRASYATQLQGLKDQLLN 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
A + NG + ++ S
Sbjct: 124 QANTTDGNGRYIFAGFKSDKPPFAVSDTGEVTYVGGDVAIEQKVDTNRSMTAGHTGASVF 183
Query: 182 DGTE 185
Sbjct: 184 MALT 187
>gi|89145672|gb|ABD62025.1| Fla [Borrelia burgdorferi]
gi|89145674|gb|ABD62026.1| Fla [Borrelia burgdorferi]
gi|89145682|gb|ABD62030.1| Fla [Borrelia bissettii]
gi|89145684|gb|ABD62031.1| Fla [Borrelia bissettii]
gi|89145686|gb|ABD62032.1| Fla [Borrelia bissettii]
gi|89145698|gb|ABD62038.1| Fla [Borrelia genomosp. 2]
gi|89145700|gb|ABD62039.1| Fla [Borrelia genomosp. 2]
Length = 151
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 10/99 (10%), Positives = 31/99 (31%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMVSDQRANLGAFQNRLESIK 112
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ + + ++ ++ DA M E + Q A
Sbjct: 113 NSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSA 151
>gi|229148126|ref|ZP_04276443.1| Flagellin [Bacillus cereus BDRD-ST24]
gi|228635338|gb|EEK91851.1| Flagellin [Bacillus cereus BDRD-ST24]
Length = 49
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 22/49 (44%)
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ ++ DADMA E + ++ + + + LS N + + L +
Sbjct: 1 MAAAASQIEDADMAKEMSNMTKFKILNEAGISMLSQANQTPQMVSKLLQ 49
>gi|291280512|ref|YP_003497347.1| hypothetical protein DEFDS_2144 [Deferribacter desulfuricans SSM1]
gi|290755214|dbj|BAI81591.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 1168
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/370 (10%), Positives = 87/370 (23%), Gaps = 3/370 (0%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N + +R + + D+V+ G + + Y++ A ++ +
Sbjct: 6 NTLYIKNQNNIRKSLERMTLANDKVNKGRNLLAPESDPVYYASAINIQRMIDEMDQFKRN 65
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIK-NKITAGVERGTDSKSIQSEITQLQSQLRDIAR- 124
+ + + A ++S K AG+ + S ++ +++ L +
Sbjct: 66 ADNALTWITNEDNELQNASSLISKAKNEYALAGLNDSQNETSRKALAGDVKNILDSMVSI 125
Query: 125 -GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+++ G + + D+G + I + LD
Sbjct: 126 GNANYFGRYIFAGYKTDTKPFSYDDKEIKGVSVDSGSQGVEIIKKRTFADLKELDEGNYT 185
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + IKV V + S S K + TT +
Sbjct: 186 VDIQKVNGSADLIKVILYDSSGNKVFIDSNSSDESAKNGNITTTEMTVKYEPGKVINLGV 245
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
G + S T +
Sbjct: 246 GFGIKLSEEDFSKFQGAKISFNYKPGDDIRYHGDEEKINAKIGYSQDVTLNLTGKDVFLA 305
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
TN + G + T I + + +
Sbjct: 306 TNRVLKGTGFNTINGLPITETAKFLDIDNINISEADYIEVSGTDHLGMPVGVAKLWSSSS 365
Query: 364 MVSFIDTQIK 373
+ + T +
Sbjct: 366 VDLDMTTATE 375
>gi|146311253|ref|YP_001176327.1| flagellar hook-associated protein FlgL [Enterobacter sp. 638]
gi|145318129|gb|ABP60276.1| flagellar hook-associated protein 3 [Enterobacter sp. 638]
Length = 317
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 54/143 (37%), Gaps = 6/143 (4%)
Query: 11 MSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I + +++++G RV+ +D+A S A ++
Sbjct: 7 MMYQQNMRGITESQSKWLGYGEQMATGKRVNRPSDDAIASSQAIVLSQAQSQNEQYKLGR 66
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLRDIAR 124
KV + +++ +++ + KI G D S+ S++ ++ QL ++A
Sbjct: 67 TFAKQKVSLEDNVLNQVNVAITSAQEKIVYAGNGTLSDDDRLSLASDLQGIRDQLMNLAN 126
Query: 125 GSSFNGENWLRTDLGSSTASIAK 147
+ NG + +
Sbjct: 127 STDGNGRFIFAGYKTETAPFDSA 149
Score = 37.8 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 29/319 (9%), Positives = 72/319 (22%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRISTQMMYQQNMRGITESQSKWLGYGEQMATGKRVNRPSDDAIASSQAIVLSQAQSQNE 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+K+ K ++ + ++
Sbjct: 61 QYKLGRTFAKQKVSLEDNVLNQVNVAITSAQEKIVYAGNGTLSDDDRLSLASDLQGIRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G + G T+ ++ + T ++
Sbjct: 121 LMNLANSTDGNGRFIFAGYKTETAPFDSATGTYSGGTEPITQQVDSARNMAISHTGKQIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ E + +I + A +K A++ I
Sbjct: 181 ESITSNAQEVPGGGYGEPNMFKILDTAIAALKVPVDTDSGAAATQKEALQTAAVGIKNTQ 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+G+ + + + + + LVD D + + + QQ A
Sbjct: 241 NNVLTVVADVGTKLNELDTLDSLGADRTLGQTQQMSDLVDVDWNAAISSYT----MQQAA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA +SLF+
Sbjct: 297 LQASYKAFTDMQG-MSLFQ 314
>gi|258512521|ref|YP_003185955.1| flagellin domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257479247|gb|ACV59566.1| flagellin domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 325
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/192 (13%), Positives = 58/192 (30%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ +IN ++ VQ+ +S+G ++ D+ S + ++ +SA I G S
Sbjct: 13 LYNMENINTAMQNVQEELSTGKVLNLPQDDPVAVSEDMDLSAEVSQVSASLSTISTGLSW 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
++ + + I + I++ I A + S+ + SQL +
Sbjct: 73 MNATQTAIQGIISQLQQIQSDIVAALNTPNQSQGGLAGYAATVSQLIQGVYQIADQMVGN 132
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
G + + + + + D + D S +
Sbjct: 133 RYLFGGQADNTAPTTYLKTSPTDTPQPIPPGAGPSSGSRSYDPFDDSQASPPNINYQIAD 192
Query: 194 HKIKVEPQVLKD 205
D
Sbjct: 193 GVSVRVTVTAYD 204
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 20/293 (6%), Positives = 63/293 (21%)
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
+ + D E + L + +
Sbjct: 21 TAMQNVQEELSTGKVLNLPQDDPVAVSEDMDLSAEVSQVSASLSTISTGLSWMNATQTAI 80
Query: 206 IDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGT 265
+ A A +
Sbjct: 81 QGIISQLQQIQSDIVAALNTPNQSQGGLAGYAATVSQLIQGVYQIADQMVGNRYLFGGQA 140
Query: 266 SGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTL 325
+ + ++ ++ + + ++ + + T+
Sbjct: 141 DNTAPTTYLKTSPTDTPQPIPPGAGPSSGSRSYDPFDDSQASPPNINYQIADGVSVRVTV 200
Query: 326 DSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSI 385
+ + S + + +++ +S + + +G+
Sbjct: 201 TAYDLFLVQPSSTAPNLQDTLNNIQTDIYSGNSGNLKQDLSDLQVNLNQVINLNAALGAR 260
Query: 386 SSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSI 438
R+ ++ + + + G + ADMA T+ S Q + A+Q +
Sbjct: 261 IQRMTAAQNQLTQYQTNLTDLKGGIEGADMARVLTQFSTDQVIYEAALQMGAQ 313
>gi|89145676|gb|ABD62027.1| Fla [Borrelia andersonii]
gi|89145678|gb|ABD62028.1| Fla [Borrelia andersonii]
gi|89145680|gb|ABD62029.1| Fla [Borrelia andersonii]
Length = 151
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 10/99 (10%), Positives = 31/99 (31%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMVSDQRANLGAFQNRLESIK 112
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ + + ++ ++ DA M E + Q A
Sbjct: 113 NSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSA 151
>gi|295678050|ref|YP_003606574.1| flagellar hook-associated protein 3 [Burkholderia sp. CCGE1002]
gi|295437893|gb|ADG17063.1| flagellar hook-associated protein 3 [Burkholderia sp. CCGE1002]
Length = 408
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 54/191 (28%), Gaps = 3/191 (1%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+ + L + +SSG ++ ADN + A + S ALS + + +
Sbjct: 15 NMSNQQAQLSQIYQEISSGQSLTTPADNPLGAAQAVQLSSTAAALSQYTTNQTEALTSLQ 74
Query: 76 IAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +S I + + G D +I +++T L+ QL A + +G
Sbjct: 75 AEDSTLSTVITTLQSANTLGLRAGNGALNDADRTAIAAQLTTLRDQLLTYANATDGSGNA 134
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
S+ A + D G + D +
Sbjct: 135 LFAGFQNSTQAFTTDAAGNVTYTGDTGSRTVQVTDSNAVATGDNGLAVFMSVGATNAQPI 194
Query: 193 NHKIKVEPQVL 203
Sbjct: 195 ASGNPANTGSG 205
>gi|206974876|ref|ZP_03235791.1| putative flagellar hook-associated protein FlgL [Bacillus cereus
H3081.97]
gi|229195952|ref|ZP_04322705.1| Flagellar hook-associated protein 3 [Bacillus cereus m1293]
gi|206746895|gb|EDZ58287.1| putative flagellar hook-associated protein FlgL [Bacillus cereus
H3081.97]
gi|228587511|gb|EEK45576.1| Flagellar hook-associated protein 3 [Bacillus cereus m1293]
Length = 287
Score = 55.5 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/168 (10%), Positives = 55/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQLMDLNAQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + +S + ++ + + + E+ + +++ I
Sbjct: 63 QKDIADSKNVLSQTENTLSGIVKSLTRADQLTIQALNGP----NGEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G+ +
Sbjct: 119 KQVVYLANTKEQGRYLFGGNSAEKPPFADDGTYQGGEKDVMWKLNDGY 166
>gi|307721024|ref|YP_003892164.1| flagellin domain-containing protein [Sulfurimonas autotrophica DSM
16294]
gi|306979117|gb|ADN09152.1| flagellin domain protein [Sulfurimonas autotrophica DSM 16294]
Length = 708
Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/384 (8%), Positives = 100/384 (26%), Gaps = 20/384 (5%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
++++ + L IN L V +++SGL++ A D+ ++ + ++ + V +
Sbjct: 9 YNSLYGTNNL-KINNELFDVNKQIASGLKIQYAKDDVKTFTETMRLDNELVTIGQVKKST 67
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ------SQLRD 121
G + +++ M+ + + S+ + +L+ L +
Sbjct: 68 ESGYKVSNQTDVVLNEFETSMNRTRTLLVNAANGTHSDDSLDAIAGELRGLEKHFKNLAN 127
Query: 122 IARGSSF-------------NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
+ F + + D G ++ + S + + +
Sbjct: 128 TSINGQFLFSGSAVNTRPIDDNGVYHGNDAGMNSFLGSNSTQKYNLTGSELFLGEDRLTR 187
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
V+ ++ + + + I + D T+ T K
Sbjct: 188 RNVTTNVIQENLSKKYPEFTATSAENGSFATITKDDTIRDLMGDTDSTVDTATQKHHFYI 247
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
+ Q + + + ++ S I + +
Sbjct: 248 RGVKSDGTSFNKQIDMKDSDKIDDLLNGIGKAYGNTSNLQIVNVGLNSNGQITIEDKLQG 307
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITR 348
+ + + + + T + +
Sbjct: 308 SSKLDFHMVGAVDFDQSDGNDEADINDAVYATAGQISNLDGGETNFAEIINPTTPPANDL 367
Query: 349 HANTDAYNEKLAMEEMVSFIDTQI 372
+ + + +S ID +
Sbjct: 368 YVKEFVKSPYASAATSISNIDGLL 391
Score = 49.7 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 37/381 (9%), Positives = 88/381 (23%), Gaps = 8/381 (2%)
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGS 126
I + + + I N T + ++S + + +I
Sbjct: 332 INDAVYATAGQISNLDGGETNFAEIINPTTPPANDLYVKEFVKSPYASAATSISNIDGLL 391
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
SS S F ++ + + +G +
Sbjct: 392 YDRTSFVKDGSTLSSNVSQVLKNSNEFATAATKISEVADLSQGTAGTLDGTTFNLNGKDV 451
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
G +D + + + A
Sbjct: 452 NGNSYTATIDFKSAGSTFSLDGGTTNYDIFNMETPRAAVDADKMTYQQLMDVVNMAATNT 511
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
+ + S+ +
Sbjct: 512 LPATTNTTTDYDAAIKQSNVVGNTKLSYDGKIEFTDLTASST-----NASLAIYDANSGD 566
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ + T +D + D K +D + V + ++ +E ++
Sbjct: 567 FTNPSSVMSFNANNALTIIDPKTDFFKNLDEAITAVEDHKLYPDSSSGTMRNQGIENAIA 626
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+D + + +G+ S+ + + +L+ + ++D D+A S +L L
Sbjct: 627 MLDKLQSHISRSHSTVGAQSNTLTSSLERSQLLEISTMTLRSSVIDTDVAEASLKLQQLN 686
Query: 427 TQQQLAVQALSIVNNSTARIL 447
Q LS V + L
Sbjct: 687 LNYQA---MLSTVGKVSQLSL 704
>gi|22126382|ref|NP_669805.1| flagellar hook-associated protein FlgL [Yersinia pestis KIM 10]
gi|45441402|ref|NP_992941.1| flagellar hook-associated protein FlgL [Yersinia pestis biovar
Microtus str. 91001]
gi|108807180|ref|YP_651096.1| flagellar hook-associated protein FlgL [Yersinia pestis Antiqua]
gi|108812476|ref|YP_648243.1| flagellar hook-associated protein FlgL [Yersinia pestis Nepal516]
gi|145598603|ref|YP_001162679.1| flagellar hook-associated protein FlgL [Yersinia pestis Pestoides
F]
gi|161760582|ref|YP_070209.2| flagellar hook-associated protein FlgL [Yersinia pseudotuberculosis
IP 32953]
gi|218928929|ref|YP_002346804.1| flagellar hook-associated protein FlgL [Yersinia pestis CO92]
gi|21959368|gb|AAM86056.1|AE013853_4 flagellar biosynthesis protein, hook-filament junction protein
[Yersinia pestis KIM 10]
gi|45436262|gb|AAS61818.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Microtus str. 91001]
gi|108776124|gb|ABG18643.1| flagellar hook-associated protein 3 [Yersinia pestis Nepal516]
gi|108779093|gb|ABG13151.1| flagellar hook-associated protein 3 [Yersinia pestis Antiqua]
gi|145210299|gb|ABP39706.1| flagellar hook-associated protein 3 [Yersinia pestis Pestoides F]
Length = 337
Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 54/184 (29%), Gaps = 6/184 (3%)
Query: 8 HSAMSASQKLRDINYNLE---VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
++M Q ++ I ++S+G RV + +D+ S A ++ S +
Sbjct: 15 STSMLYQQNMQGITNAQSLWMQTGQQLSTGKRVVNPSDDPMAASQAVMVSQAESENSQYT 74
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
A + +++ + +I++ + + D S +++ L+ QL +
Sbjct: 75 LARSFARQSSSLETTVLAQTTSTIQSIQSLVISAKNDTLSDDDRASYATQLQGLKDQLLN 134
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
A + NG + ++ S
Sbjct: 135 QANTTDGNGRYIFAGFKSDKPPFAVSDTGEVTYVGGDVAIEQKVDTNRSMTAGHTGASVF 194
Query: 182 DGTE 185
Sbjct: 195 MALT 198
>gi|291326354|ref|ZP_06124196.2| flagellar hook-associated protein 3 [Providencia rettgeri DSM 1131]
gi|291314692|gb|EFE55145.1| flagellar hook-associated protein 3 [Providencia rettgeri DSM 1131]
Length = 305
Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 47/169 (27%), Gaps = 4/169 (2%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
Q + +++SG RVS +D+ S A + + G +
Sbjct: 7 LQDMNSAQARWMDAGSQLASGKRVSKPSDDPQASSQAVRINQSENRNQQYVASRGFAKTG 66
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVE----RGTDSKSIQSEITQLQSQLRDIARGSSFN 129
+ + + +++ DV + I I D ++ ++T L+ QL + + N
Sbjct: 67 MTLQMSILTQMTDVTTQIDTTIIQASNQGALSDKDRNTLAEQLTGLKEQLVALGNSTDGN 126
Query: 130 GENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
G + + +
Sbjct: 127 GRYIFAGFKSDKPPFEIDANGDVLYHGGDKAIMQNVASDREMTTYFTGA 175
>gi|89145688|gb|ABD62033.1| Fla [Borrelia californiensis]
gi|89145690|gb|ABD62034.1| Fla [Borrelia californiensis]
gi|89145692|gb|ABD62035.1| Fla [Borrelia californiensis]
Length = 151
Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 10/99 (10%), Positives = 31/99 (31%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 112
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ + + ++ ++ DA M E + Q A
Sbjct: 113 NSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSA 151
>gi|258513987|ref|YP_003190209.1| flagellar hook-associated protein 3 [Desulfotomaculum acetoxidans
DSM 771]
gi|257777692|gb|ACV61586.1| flagellar hook-associated protein 3 [Desulfotomaculum acetoxidans
DSM 771]
Length = 305
Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 10/112 (8%), Positives = 43/112 (38%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+ ++ Q +SSG ++S ++N + A +K+ I ++
Sbjct: 15 NIERQMRDIAQNQLDISSGKKLSTLSENPSDLGKAMALKTSLDKQEQYKSNIDNAIGWMN 74
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSS 127
+ ++ + +++ + ++ + G +++ ++ + + ++
Sbjct: 75 QTETALADSAELVLSARDLVLEVGNLGVGETDMKAMSAEVGVIIEQLTANTN 126
>gi|226320910|ref|ZP_03796461.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 29805]
gi|226233682|gb|EEH32412.1| flagellar hook-associated protein 3 [Borrelia burgdorferi 29805]
Length = 111
Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 25/76 (32%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G R+ ++ + + +D L+ I S + + + ++++ K
Sbjct: 36 GKRIVKLRNDPTGVTHTIRLDNDIFKLNVYIKNIDTSKSNLRYTERYLQSLTNILTRAKE 95
Query: 94 KITAGVERGTDSKSIQ 109
G +S +
Sbjct: 96 IAIQGASGTYESDDKK 111
>gi|254723816|ref|ZP_05185602.1| flagellar hook-associated protein FlgL [Bacillus anthracis str.
A1055]
Length = 287
Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 55/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLTNIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + ++ + + + + E+ + ++L +
Sbjct: 63 QKDIADSRNVLSQTENTLQSIVKSLTRVDQLTIQALNGT----NSEKELKAIGAELDQLV 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G+ +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEKPPFTDDGTYQGGENDVMWKLNDGY 166
>gi|189426420|ref|YP_001953597.1| flagellin domain protein [Geobacter lovleyi SZ]
gi|189422679|gb|ACD97077.1| flagellin domain protein [Geobacter lovleyi SZ]
Length = 275
Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/225 (16%), Positives = 67/225 (29%), Gaps = 2/225 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I S L+ + ++ Q R+SSG +V+ DN + AQ LS
Sbjct: 6 ISLTSGMRSNLLSLQGTSKLIDQTQTRLSSGKKVNTPLDNPTNYFAAQGHMERAADLSVR 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK--ITAGVERGTDSKSIQSEITQLQSQLRD 121
D + S V A G+ ++ K + + + L SQ+
Sbjct: 66 KDGMAEAISMVKAADTGIKAITSLIEAAKGVAGAALATSDAAERSTYTTTFNTLLSQVSQ 125
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+A S + G N L + + I + TI + +S
Sbjct: 126 LASDSGYRGTNLLTAGSQTVEFGQRTNAATLQISGFSATATGLTIQSAVATAWSASGNSA 185
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ L ++ + L V ++ L T
Sbjct: 186 INSSSSELESALSFLRAKSSSLSANLSVVTTRQDFTNSMINTLQT 230
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+ + S + ++DF M + ++ G L AD E + LQT+Q L + +LS+
Sbjct: 205 SSLSANLSVVTTRQDFTNSMINTLQTGADNLTLADTNEEGANMLMLQTRQNLGITSLSMA 264
Query: 440 NNSTARILSLF 450
+ S +L LF
Sbjct: 265 SQSAQAVLRLF 275
>gi|119947170|ref|YP_944850.1| flagellar hook-associated protein 3 [Psychromonas ingrahamii 37]
gi|119865774|gb|ABM05251.1| flagellar hook-associated protein 3 [Psychromonas ingrahamii 37]
Length = 296
Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/131 (9%), Positives = 45/131 (34%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ N L + ++ +G +++ +D+ ++ +S D S
Sbjct: 13 LTGMSKSNTELSTLLQQMYTGEKITKPSDDPIATIKLMGLEKTQAEISQYKDNNENVKSG 72
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
+ + ++ ++ + + + G+ + +T+L+S + + +
Sbjct: 73 YQLYETHIANVVEGLQSTNELLLWGLNGTMTLEDRAGIVTELESLHASMVSTFNAKNSHG 132
Query: 134 LRTDLGSSTAS 144
G++T
Sbjct: 133 SYLFSGTATDQ 143
>gi|229023208|ref|ZP_04179719.1| Flagellar hook-associated protein 3 [Bacillus cereus AH1272]
gi|228738133|gb|EEL88618.1| Flagellar hook-associated protein 3 [Bacillus cereus AH1272]
Length = 287
Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/158 (12%), Positives = 55/158 (34%), Gaps = 3/158 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A ++ D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQMMDLNVQQQYYRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLR 120
I + + + + + ++ ++ G + K+ +EI QL Q+
Sbjct: 63 QKDIADSRNVLSQTENTLQGIVKSLTRVEQLTLQAVNGTNSPNELKASAAEIDQLLKQVV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN 158
+A + + + G
Sbjct: 123 YLANKQEQGRYIFGGDSASKPPFAEDGTYQGGENDVTW 160
>gi|73762208|gb|AAZ83592.1| Fla [Borrelia garinii]
Length = 151
Score = 55.1 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 11/99 (11%), Positives = 31/99 (31%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 112
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
D + + ++ ++ DA M E + Q A
Sbjct: 113 DSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSA 151
>gi|73762218|gb|AAZ83597.1| Fla [Borrelia valaisiana VS116]
gi|73762220|gb|AAZ83598.1| Fla [Borrelia valaisiana]
gi|89145704|gb|ABD62041.1| Fla [Borrelia valaisiana]
Length = 151
Score = 54.7 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 11/99 (11%), Positives = 31/99 (31%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 112
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
D + + ++ ++ DA M E + Q A
Sbjct: 113 DSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSA 151
>gi|189426419|ref|YP_001953596.1| flagellin domain protein [Geobacter lovleyi SZ]
gi|189422678|gb|ACD97076.1| flagellin domain protein [Geobacter lovleyi SZ]
Length = 275
Score = 54.7 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/225 (16%), Positives = 71/225 (31%), Gaps = 2/225 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I S L+ +++ Q+R+SSG RV+ DN + AQ L+
Sbjct: 6 ISLTSGMRSNLLSLQGTAKSIDQTQNRLSSGKRVNTPLDNPTNYFAAQGHVERASDLAVR 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQLRD 121
D + V A G+ ++ + K TA + + + L +Q+
Sbjct: 66 KDGMAEAIQMVKAADTGIKGITSLIESAKGVATAALATSDTNERSTYSATFNTLLNQVSM 125
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+A S + G N L + + I N T+ + +S
Sbjct: 126 MASDSGYRGINLLTNGSQTVEFGQRTNASTLQITGFNATAAGLTMQSAVATAWSASGNSA 185
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ L ++ + L +V ++ L T
Sbjct: 186 INSSSSELESALSFLRTKSSALSANLSAVTTRQDFTNSMINNLQT 230
Score = 50.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 69/198 (34%)
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A TS +K + AA AT S T + S +
Sbjct: 78 AADTGIKGITSLIESAKGVATAALATSDTNERSTYSATFNTLLNQVSMMASDSGYRGINL 137
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
T+ E + L + + + A + + A+ S +++ +
Sbjct: 138 LTNGSQTVEFGQRTNASTLQITGFNATAAGLTMQSAVATAWSASGNSAINSSSSELESAL 197
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ + + S + ++DF M + ++ G L AD E + LQT+Q L
Sbjct: 198 SFLRTKSSALSANLSAVTTRQDFTNSMINNLQTGADNLTLADTNEEGANMLMLQTRQNLG 257
Query: 433 VQALSIVNNSTARILSLF 450
+ +LS+ + + +L LF
Sbjct: 258 ITSLSMASQAAQAVLKLF 275
>gi|229029419|ref|ZP_04185502.1| Flagellar hook-associated protein 3 [Bacillus cereus AH1271]
gi|228731878|gb|EEL82777.1| Flagellar hook-associated protein 3 [Bacillus cereus AH1271]
Length = 287
Score = 54.7 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/168 (10%), Positives = 55/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + +S + ++ + + + E+ + +++ I
Sbjct: 63 QKDIADSKNVLSQTETTLSGIVKSLTRADQLTIQALNGP----NGEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G+ +
Sbjct: 119 KQVVYLANTKEQGRYLFGGDSAEKPPFADDGTYQGGEKDVMWKLNDGY 166
>gi|330861097|emb|CBX71364.1| flagellar hook-associated protein 3 [Yersinia enterocolitica
W22703]
Length = 373
Score = 54.7 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/184 (12%), Positives = 55/184 (29%), Gaps = 6/184 (3%)
Query: 8 HSAMSASQKLRDINYNLE---VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
++M Q ++ + ++S+G RV + +D+ S A ++ + +
Sbjct: 50 STSMLYQQNMQGVTNAQSLWMQSGQQLSTGKRVVNPSDDPMAASQAVMVSQSQSENNQYT 109
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLRD 121
A + +S+A + +I++ D S+ +++ L+ QL +
Sbjct: 110 LARSFARQSSSLETTVLSQATSTIQSIQSLIIGAAKDSLSDDDRASMATQLQGLKDQLLN 169
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
A + NG + + +Q S
Sbjct: 170 QANSTDGNGRYMFGGFQSDKAPFAVSNTGEVTYVGGDVAIQQRVDSNRTMTVGHTGSSVF 229
Query: 182 DGTE 185
Sbjct: 230 MALT 233
Score = 37.4 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 34/336 (10%), Positives = 85/336 (25%), Gaps = 8/336 (2%)
Query: 116 QSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
++ + ++ + T+ S + + + + + ++
Sbjct: 43 RTDIVRLSTSMLYQQNMQGVTNAQSLWMQSGQQLSTGKRVVNPSDDPMAASQAVMVSQSQ 102
Query: 176 LLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
++ + + + V Q I G S A
Sbjct: 103 SENNQYTLARSFARQSSSLETTVLSQATSTIQSIQSLIIGAAKDSLSDDDRASMATQLQG 162
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
+ +T + + + S + V + + R T
Sbjct: 163 LKDQLLNQANSTDGNGRYMFGGFQSDKAPFAVSNTGEVTYVGGDVAIQQRVDSNRTMTVG 222
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
S ++ A D + + + + S + + A
Sbjct: 223 HTGSSVFMALTSNATPEPNDVNGDPVAAESNIFNTIDTVLKSLKTPLQGTRGXRVKQQAS 282
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+E ++ + + +IG+ + + ++ + L D D
Sbjct: 283 DEMDKGIRGMA---NSLNNVLSVQAEIGTQLQELDSLDSLGSDRTLINKQRLSDLQDVDW 339
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
S + QQ A+QA + LSLF+
Sbjct: 340 NSAISSY----VMQQAALQASYTTFTNMQG-LSLFQ 370
>gi|271963154|ref|YP_003337350.1| adenylate kinase [Streptosporangium roseum DSM 43021]
gi|270506329|gb|ACZ84607.1| adenylate kinase [Streptosporangium roseum DSM 43021]
Length = 237
Score = 54.7 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 10/92 (10%), Positives = 30/92 (32%), Gaps = 3/92 (3%)
Query: 45 AYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT- 103
A + ++ + + + + +++ +V+ ++
Sbjct: 10 AGPADVGQYEARPNEVIRAARNASQALEFIRTTEGHLNELTNVLQRMRVLSIQSANGTYS 69
Query: 104 --DSKSIQSEITQLQSQLRDIARGSSFNGENW 133
D +Q E+ QL ++ +A +FN
Sbjct: 70 EEDRSVVQIEVDQLTDEISRVADQMNFNKMRM 101
>gi|4760505|dbj|BAA77313.1| flagellin [Pseudomonas putida]
Length = 179
Score = 54.7 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 6/57 (10%), Positives = 23/57 (40%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ + ++ + +D ++ + +G++ +R + + + R+ DA
Sbjct: 123 DSASAQQAIQALDGAMQQVDSQRASLGAVQNRFDSTVSNLNSISENSTAARSRVQDA 179
>gi|4760485|dbj|BAA77303.1| flagellin [Pseudomonas fluorescens]
Length = 156
Score = 54.7 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 33/100 (33%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
V+ S+ S + G + + + + + VS ID I
Sbjct: 57 ATGAVNMNSSKGYSLEGAGVTGLFGAATSAASAKVAVSQTDVTDATKAQNAVSVIDQAIA 116
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+++ +G++ +R+ D + ++ + D
Sbjct: 117 TISSSRSGLGAVQNRLTSTVDNLTNIQKNTTSARSTVQDV 156
>gi|322419145|ref|YP_004198368.1| flagellin domain-containing protein [Geobacter sp. M18]
gi|320125532|gb|ADW13092.1| flagellin domain protein [Geobacter sp. M18]
Length = 272
Score = 54.7 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 40/94 (42%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + +DT I + + + I ++ F M + ++ G L ADM
Sbjct: 179 TVSDITTDTALMDTAISTLRTNTQALAANLNIITTRQSFTDEMINTLQTGADNLTLADMN 238
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
E + LQT+Q L +LS+ + + IL LF
Sbjct: 239 EEGANMLMLQTRQSLGTTSLSLSSQAAQSILKLF 272
Score = 49.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 54/140 (38%), Gaps = 2/140 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I + L++ + L Q R+SSG V+ A DN + AQ LS
Sbjct: 4 SDISLTAGMRTNLLYLQNTSQLLNRTQQRLSSGKEVNSALDNPTNYFAAQNANQRASDLS 63
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQL 119
D + V+ AG++ +++ K + T + + ++SQ+
Sbjct: 64 DRKDGMSEAVQTVNATNAGITAITGLINAAKGVAQSALSTSDTTVQSKLALQYNTIRSQI 123
Query: 120 RDIARGSSFNGENWLRTDLG 139
+I+ S + G N L T
Sbjct: 124 DNISSDSGYRGLNLLSTINT 143
>gi|324325757|gb|ADY21017.1| flagellar hook-associated protein FlgL [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 287
Score = 54.4 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/168 (10%), Positives = 55/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + +S + ++ + + + E+ + +++ I
Sbjct: 63 QKDIADSKNVLSQTENTLSGIVKSLTRADQLTIQALNGP----NGEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G+ +
Sbjct: 119 KQVVYLANTKEQGRYLFGGNSAEKPPFADDGTYQGGEKDVMWKLNDGY 166
>gi|229160703|ref|ZP_04288695.1| Flagellar hook-associated protein 3 [Bacillus cereus R309803]
gi|228622718|gb|EEK79552.1| Flagellar hook-associated protein 3 [Bacillus cereus R309803]
Length = 287
Score = 54.4 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 54/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + ++ + + + E+ + +++ I
Sbjct: 63 QKDIADSKNVLSQTENTLQGIVKSLTRADQLTIQALNGT----NSEKELKAIGTEVDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G+ +
Sbjct: 119 KQVVYLANTKEQGRYLFGGDSAEKPPFADDGTYQGGEKDVMWKLNDGY 166
>gi|253702416|ref|YP_003023605.1| flagellin domain protein [Geobacter sp. M21]
gi|251777266|gb|ACT19847.1| flagellin domain protein [Geobacter sp. M21]
Length = 272
Score = 54.4 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/223 (15%), Positives = 72/223 (32%), Gaps = 2/223 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + L++ + L Q R+SSG +V+ A DN + AQ LS
Sbjct: 6 ISLTAGMRTNLLNLQNTSDLLNRTQQRLSSGKKVNSALDNPTNYFAAQNASQRASDLSDR 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQLRD 121
D + G V A AG++ +++ K + + ++ ++SQ+ +
Sbjct: 66 KDGMSEGVQTVSAANAGITAITGLINAAKGIAQSALSTSDTLTRSKLATQYDTIRSQIDN 125
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I+ S + G N L T + + + ++ + +T
Sbjct: 126 ISSDSGYRGLNLLSTTNTLTVNFNENASSSLNVVGFLATSSGLSMGPASGAWENASNITT 185
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
D + + +I + + + +
Sbjct: 186 DTAKMDTAISTLRSNTQTLAANLNIITTRQNFTDEMINTLQTG 228
Score = 52.4 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ +DT I + + + + I +++F M + ++ G L ADM +E + L
Sbjct: 188 AKMDTAISTLRSNTQTLAANLNIITTRQNFTDEMINTLQTGADNLTLADMNNEGANMLML 247
Query: 426 QTQQQLAVQALSIVNNSTARILSLF 450
QT+Q L +LS+ + + +L LF
Sbjct: 248 QTRQSLGTTSLSMSSQAAQAVLRLF 272
>gi|89145702|gb|ABD62040.1| Fla [Borrelia valaisiana]
Length = 151
Score = 54.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 10/99 (10%), Positives = 31/99 (31%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 112
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ + + ++ ++ DA M E + Q A
Sbjct: 113 NSTEYAIENLKASYAQIKDATMTDEVVAATTNSILTQSA 151
>gi|7677627|gb|AAF67137.2|AF228032_1 flagellin [Borrelia hermsii]
Length = 159
Score = 54.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 14/146 (9%), Positives = 42/146 (28%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G+ W + + N + V N ++ + + +
Sbjct: 13 GSQASWTLRVHVGANQDEAIAVNIYASNVANLFAGEGAQAAPVQEIGQQEEGQAAPAPAA 72
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + ++ I+ I+ + +G+ +R+ +D + +
Sbjct: 73 APAQGGVNSPINVTTAVDANMSLAKIEGAIRMVSDQRANLGAFQNRLESIKDSTEYAIEN 132
Query: 403 VEKGVGRLVDADMASESTRLSALQTQ 428
++ ++ DA M E +
Sbjct: 133 LKASYAQIKDATMTDEVVASTTHSIL 158
>gi|229189836|ref|ZP_04316847.1| Flagellar hook-associated protein 3 [Bacillus cereus ATCC 10876]
gi|228593644|gb|EEK51452.1| Flagellar hook-associated protein 3 [Bacillus cereus ATCC 10876]
Length = 287
Score = 54.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/168 (10%), Positives = 54/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + ++ + + + E+ + +++ I
Sbjct: 63 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQALNGT----NSEKELQAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K GK +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEKPPFTEDGTYQGGKNDVNWQLNDGY 166
>gi|222095363|ref|YP_002529423.1| flagellar hook-associated protein flgl [Bacillus cereus Q1]
gi|221239421|gb|ACM12131.1| flagellar hook-associated protein FlgL, putative [Bacillus cereus
Q1]
Length = 287
Score = 54.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/168 (10%), Positives = 55/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + +S + ++ + + + E+ + +++ I
Sbjct: 63 QKDIADSKNVLSQTENTLSGIVKSLTRADQLTIQALNGP----NGEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G+ +
Sbjct: 119 KQVVYLANTKEQGRYLFGGNSAEKPPFADDGTYQGGEKDVMWKLNDGY 166
>gi|261821160|ref|YP_003259266.1| flagellar hook-associated protein FlgL [Pectobacterium wasabiae
WPP163]
gi|261605173|gb|ACX87659.1| flagellar hook-associated protein 3 [Pectobacterium wasabiae
WPP163]
Length = 318
Score = 54.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 55/143 (38%), Gaps = 5/143 (3%)
Query: 8 HSAMSASQKLRDINYNLEVVQ---DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
++M Q ++ + L Q +++S+G RV + +D+ + ++ +
Sbjct: 4 STSMIYQQNMQGVTNGLATWQKTGEQLSTGKRVVNPSDDPIAAANVIMLGQAQSENGQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQLRDI 122
A + + + + K+I +++ ++ G+ D KS + ++++L ++
Sbjct: 64 LARTFAKQSMSLEDSILDKSITTITSALTEVINGGGIRSDDDRKSNAIALRGMKAELLNL 123
Query: 123 ARGSSFNGENWLRTDLGSSTASI 145
A + NG
Sbjct: 124 ANSTDGNGNYIFAGYQTDKVPFT 146
>gi|23092532|gb|AAN08500.1| flagellin [Halobacillus halophilus]
Length = 139
Score = 54.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 36/120 (30%), Gaps = 3/120 (2%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRD 121
S + A+ +++ ++ ++ TD IQ E+ QL S++
Sbjct: 1 RNSQDSISMIQTAEGALNETHSILQRMRELAVQSGNDTNTSTDRGEIQKEMNQLTSEINR 60
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I + FN + L G TA + S T + T
Sbjct: 61 IGNTTEFNNQKLLNATAGEVTAGSTTTTPASASSTQTNGSSGNITITDASSFTGDTGTWT 120
>gi|217959223|ref|YP_002337771.1| flagellar hook-associated protein FlgL [Bacillus cereus AH187]
gi|229138439|ref|ZP_04267028.1| Flagellar hook-associated protein 3 [Bacillus cereus BDRD-ST26]
gi|217066372|gb|ACJ80622.1| putative flagellar hook-associated protein FlgL [Bacillus cereus
AH187]
gi|228644976|gb|EEL01219.1| Flagellar hook-associated protein 3 [Bacillus cereus BDRD-ST26]
Length = 287
Score = 54.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/168 (10%), Positives = 55/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + +S + ++ + + + E+ + +++ I
Sbjct: 63 QKDIADSKNVLSQTENTLSGIVKSLTRADQLTIQALNGP----NGEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G+ +
Sbjct: 119 KQVVYLANTKEQGRYLFGGDSAEKPPFADDGTYQGGEKDVMWKLNDGY 166
>gi|300117342|ref|ZP_07055132.1| flagellar hook-associated protein FlgL [Bacillus cereus SJ1]
gi|298725177|gb|EFI65829.1| flagellar hook-associated protein FlgL [Bacillus cereus SJ1]
Length = 287
Score = 54.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/168 (8%), Positives = 52/168 (30%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLFMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + ++ + + + E+ + +++ I
Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLTVQALNGT----NSEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEKPPFTEDGTYQGGPDDVNWQLNDGY 166
>gi|228914318|ref|ZP_04077933.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228945342|ref|ZP_04107697.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228814314|gb|EEM60580.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228845312|gb|EEM90348.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 287
Score = 54.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/168 (8%), Positives = 52/168 (30%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLFMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + ++ + + + E+ + +++ I
Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLTVQALNGT----NSEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEKPPFTEDGTYQGGPNDVNWQLNDGY 166
>gi|94266405|ref|ZP_01290101.1| Flagellin hook IN [delta proteobacterium MLMS-1]
gi|93452977|gb|EAT03473.1| Flagellin hook IN [delta proteobacterium MLMS-1]
Length = 683
Score = 54.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A+++ ++ +DT T G+ ++RI +Q + ++ A + + L D D+
Sbjct: 595 ALQKSITELDTLHNELTNQISDFGARANRIEVQNNIYMNLKLATSENLSELEDTDLVEAI 654
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARIL 447
L A +T Q A LS + + L
Sbjct: 655 MELKAKETAYQAA---LSSASRTMQMSL 679
>gi|331691398|gb|AED89556.1| flagellin [Borrelia anserina]
Length = 205
Score = 54.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/173 (9%), Positives = 44/173 (25%)
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYV 318
+ G+ W + + N A V N
Sbjct: 33 AQNVRTAEEHGMQPAKINTPASISGSQASWTLRVHVGANQDEAIAVNIYAANVANLFAGE 92
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
++ ++V + + ++ I+ I+ +
Sbjct: 93 GVQAAPAQEGAQQEGVQAIPATVVAPAPGGVNSPINVITAVDANMSLATIEDAIRMVSDQ 152
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+G+ +R+ +D + + ++ ++ DA M E + Q
Sbjct: 153 RANLGAFQNRLESIKDSTEYAIENLKGSYAQIKDATMTDEIVASTTNSILTQS 205
>gi|149366244|ref|ZP_01888279.1| flagellar hook-associated protein 3 [Yersinia pestis CA88-4125]
gi|153949096|ref|YP_001401282.1| flagellar hook-associated protein FlgL [Yersinia pseudotuberculosis
IP 31758]
gi|165926015|ref|ZP_02221847.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165938694|ref|ZP_02227249.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Orientalis str. IP275]
gi|166010848|ref|ZP_02231746.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166211142|ref|ZP_02237177.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167401154|ref|ZP_02306657.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167420376|ref|ZP_02312129.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167425889|ref|ZP_02317642.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167467498|ref|ZP_02332202.1| flagellar hook-associated protein FlgL [Yersinia pestis FV-1]
gi|170024640|ref|YP_001721145.1| flagellar hook-associated protein FlgL [Yersinia pseudotuberculosis
YPIII]
gi|186895121|ref|YP_001872233.1| flagellar hook-associated protein FlgL [Yersinia pseudotuberculosis
PB1/+]
gi|229896252|ref|ZP_04511422.1| flagellar hook-associated protein 3 [Yersinia pestis Pestoides A]
gi|229897189|ref|ZP_04512345.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229897916|ref|ZP_04513067.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Orientalis str. India 195]
gi|229902853|ref|ZP_04517970.1| flagellar hook-associated protein 3 [Yersinia pestis Nepal516]
gi|270486638|ref|ZP_06203712.1| flagellar hook-associated protein 3 [Yersinia pestis KIM D27]
gi|294504023|ref|YP_003568085.1| flagellar hook-associated protein [Yersinia pestis Z176003]
gi|51589300|emb|CAH20921.1| flagellar hook-associated protein 3 [Yersinia pseudotuberculosis IP
32953]
gi|115347540|emb|CAL20449.1| flagellar hook-associated protein 3 [Yersinia pestis CO92]
gi|149292657|gb|EDM42731.1| flagellar hook-associated protein 3 [Yersinia pestis CA88-4125]
gi|152960591|gb|ABS48052.1| flagellar hook-associated protein 3 [Yersinia pseudotuberculosis IP
31758]
gi|165913308|gb|EDR31930.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Orientalis str. IP275]
gi|165922219|gb|EDR39396.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165990192|gb|EDR42493.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166208322|gb|EDR52802.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166962071|gb|EDR58092.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167049543|gb|EDR60951.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167055288|gb|EDR65085.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169751174|gb|ACA68692.1| flagellar hook-associated protein 3 [Yersinia pseudotuberculosis
YPIII]
gi|186698147|gb|ACC88776.1| flagellar hook-associated protein 3 [Yersinia pseudotuberculosis
PB1/+]
gi|229680300|gb|EEO76399.1| flagellar hook-associated protein 3 [Yersinia pestis Nepal516]
gi|229688957|gb|EEO81022.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Orientalis str. India 195]
gi|229693526|gb|EEO83575.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229701175|gb|EEO89204.1| flagellar hook-associated protein 3 [Yersinia pestis Pestoides A]
gi|262361791|gb|ACY58512.1| flagellar hook-associated protein [Yersinia pestis D106004]
gi|262366073|gb|ACY62630.1| flagellar hook-associated protein [Yersinia pestis D182038]
gi|270335142|gb|EFA45919.1| flagellar hook-associated protein 3 [Yersinia pestis KIM D27]
gi|294354482|gb|ADE64823.1| flagellar hook-associated protein [Yersinia pestis Z176003]
gi|320015456|gb|ADV99027.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 326
Score = 54.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 54/184 (29%), Gaps = 6/184 (3%)
Query: 8 HSAMSASQKLRDINYNLE---VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
++M Q ++ I ++S+G RV + +D+ S A ++ S +
Sbjct: 4 STSMLYQQNMQGITNAQSLWMQTGQQLSTGKRVVNPSDDPMAASQAVMVSQAESENSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---TDSKSIQSEITQLQSQLRD 121
A + +++ + +I++ + + D S +++ L+ QL +
Sbjct: 64 LARSFARQSSSLETTVLAQTTSTIQSIQSLVISAKNDTLSDDDRASYATQLQGLKDQLLN 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
A + NG + ++ S
Sbjct: 124 QANTTDGNGRYIFAGFKSDKPPFAVSDTGEVTYVGGDVAIEQKVDTNRSMTAGHTGASVF 183
Query: 182 DGTE 185
Sbjct: 184 MALT 187
>gi|238764399|ref|ZP_04625349.1| Flagellar hook-associated protein 3 [Yersinia kristensenii ATCC
33638]
gi|238697425|gb|EEP90192.1| Flagellar hook-associated protein 3 [Yersinia kristensenii ATCC
33638]
Length = 360
Score = 54.4 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 56/184 (30%), Gaps = 6/184 (3%)
Query: 8 HSAMSASQKLRDINYNLE---VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
++M Q ++ I ++S+G RV + +D+ S A ++ + +
Sbjct: 38 STSMLYQQNMQGITNAQSLWMQSGQQLSTGKRVVNPSDDPMSASQAVMVSQAQSENNQYA 97
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRD 121
A + +++A + +I++ I + D S +++ L+ QL +
Sbjct: 98 LARSFARQSSSLETTVLAQATSTIQSIQSVIISAKSDILSDDDRASYATQLQGLKDQLVN 157
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
A + NG + ++ DS
Sbjct: 158 QANTTDGNGRYIFGGFQSDKPPFAVSKTGEVTYVGGDVAIEQKVDANRSMTVGHTGDSVF 217
Query: 182 DGTE 185
Sbjct: 218 MALT 221
>gi|52143718|ref|YP_083110.1| flagellar hook-associated protein FlgL [Bacillus cereus E33L]
gi|51977187|gb|AAU18737.1| flagellar hook-associated protein 3 [Bacillus cereus E33L]
Length = 287
Score = 54.0 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/168 (8%), Positives = 53/168 (31%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLFMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + ++ + + + E+ + +++ I
Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLTVQALNGT----NSEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G+ +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEKPPFTEDGTYQGGQNDVNWQLNDGY 166
>gi|116805582|gb|ABK27776.1| flagellin [Treponema phagedenis subsp. vaccae]
Length = 170
Score = 54.0 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 3/112 (2%)
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARG 125
G S + +A++ + + DV+ I+ D IQ E++QL +++ IA
Sbjct: 1 NGISFIQVAESYLQETTDVIQRIRELSVQSANGIYSAEDRMYIQVEVSQLVAEIDRIASH 60
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ FNG N L T + F N + + + +
Sbjct: 61 AQFNGMNMLTGRFARETGENTVTGSMWFHIGANMDQRTRAYIGTMTAAALGV 112
Score = 44.7 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 5/49 (10%), Positives = 16/49 (32%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
++ + +D IK +G+ +R+ + + +
Sbjct: 122 NIDDPEKANRAIGTLDEAIKKINKQRADLGAYQNRLEYTVIGVNVAAEN 170
>gi|116805596|gb|ABK27783.1| flagellin [Treponema vincentii]
gi|116805598|gb|ABK27784.1| flagellin [Treponema vincentii]
Length = 170
Score = 54.0 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 46/135 (34%), Gaps = 3/135 (2%)
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARG 125
G S + +A+A + + DVM I+ D IQ E++QL +++ IA
Sbjct: 1 DGISFIQVAEAYLQETTDVMQRIRELSVQSSNGIYSAEDRLYIQVEVSQLVAEVDRIASH 60
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+ FNG N L T + F N ++ + + + + D +
Sbjct: 61 AQFNGMNMLTGRFARETGENTVTASMWFHIGANMDQRVRAYVGTMTAKALGVRDIGDESI 120
Query: 186 RYGLLDRNHKIKVEP 200
+
Sbjct: 121 LTIDTPETANRAIGT 135
Score = 43.6 bits (100), Expect = 0.062, Method: Composition-based stats.
Identities = 6/48 (12%), Positives = 16/48 (33%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + +D IK +G+ +R+ + I + +
Sbjct: 123 IDTPETANRAIGTLDEAIKKINKQRADLGAYQNRLEMSVVGINVAAEN 170
>gi|78067829|ref|YP_370598.1| flagellar hook-associated protein FlgL [Burkholderia sp. 383]
gi|77968574|gb|ABB09954.1| Flagellin-like protein [Burkholderia sp. 383]
Length = 413
Score = 54.0 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 61/197 (30%), Gaps = 3/197 (1%)
Query: 31 VSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMST 90
+SSG+ + AADN A + A + + LS + + + + V++
Sbjct: 30 ISSGVSLQTAADNPAGAAQAVQLSMASATLSQYATNQNAALASLQAEDQTLQNVSTVLTN 89
Query: 91 IKNKIT---AGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
++ + G +D ++ +++ + QL +A + G S+
Sbjct: 90 TQSLLVRAGDGSMSDSDRSALATQLQGYRDQLMTLANTNDGAGNYLFAGTKNSAAPFSTT 149
Query: 148 SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
D G Q+ D + + G
Sbjct: 150 PSGSVAYVGDTGTRQVQITDSSTVSQGDTGAAVFMSVPAIGSSPVPSARAGNTGTGTIGA 209
Query: 208 VSVYDASGTISTKKFKL 224
V+V + S + +F +
Sbjct: 210 VTVTNPSIATNGHQFSI 226
>gi|238753237|ref|ZP_04614655.1| Flagellin [Yersinia rohdei ATCC 43380]
gi|238708544|gb|EEQ00844.1| Flagellin [Yersinia rohdei ATCC 43380]
Length = 112
Score = 54.0 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 23/75 (30%)
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ + V ++ + +G+ +R+ + M+D
Sbjct: 37 ARNDYDAGVTNLTIGSAKTSMKAVEALEKAVATYGEMRSTLGASINRLDSSAANLSNMKD 96
Query: 402 AVEKGVGRLVDADMA 416
E + +VD D A
Sbjct: 97 NTELAMSSIVDTDFA 111
>gi|116805578|gb|ABK27774.1| flagellin [Treponema phagedenis subsp. vaccae]
gi|116805586|gb|ABK27778.1| flagellin [Treponema phagedenis subsp. vaccae]
Length = 170
Score = 54.0 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 3/112 (2%)
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARG 125
G S + +A++ + + DV+ I+ D IQ E++QL +++ IA
Sbjct: 1 NGISFIQVAESYLQETTDVIQRIRELSVQSANGIYSAEDRMYIQVEVSQLVAEIDRIASH 60
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ FNG N L T + F N + + + +
Sbjct: 61 AQFNGMNMLTGRFARETGENTVTASMWFHIGANMDQRTRAYIGTMTAAALGV 112
Score = 40.1 bits (91), Expect = 0.65, Method: Composition-based stats.
Identities = 4/49 (8%), Positives = 15/49 (30%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
++ + +D K +G+ +R+ + + +
Sbjct: 122 NIDDPEKANRAIGTLDEAFKKINKQRADLGAYQNRLKYTVIGVNVAAEN 170
>gi|7677628|gb|AAF67138.2|AF228033_1 flagellin [Borrelia hermsii]
gi|7677629|gb|AAF67139.2|AF228034_1 flagellin [Borrelia hermsii]
Length = 159
Score = 54.0 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/146 (10%), Positives = 42/146 (28%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G+ W + + N + V N ++ + + +
Sbjct: 13 GSQASWTLRVHVGANQDEAIAVNIYASNVANLFAGEGAQAAPVQEIGQQEEGQAAPAPAA 72
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + ++ I+ I+ T +G+ +R+ +D + +
Sbjct: 73 APAQGGVNSPINVTTAVDANMSLAKIEGAIRMVTDQRANLGAFQNRLESIKDSTEYAIEN 132
Query: 403 VEKGVGRLVDADMASESTRLSALQTQ 428
++ ++ DA M E +
Sbjct: 133 LKASYAQIKDATMTDEVVASTTHSIL 158
>gi|116805580|gb|ABK27775.1| flagellin [Treponema phagedenis subsp. vaccae]
Length = 170
Score = 54.0 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 3/135 (2%)
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARG 125
G S + +A++ + + DV+ I+ D IQ E++QL +++ IA
Sbjct: 1 NGVSFIQVAESYLQETTDVIQRIRELAVQSANGIYSAEDRMYIQVEVSQLVAEIDRIASH 60
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+ FNG N L T A + F N + + + + D +
Sbjct: 61 AQFNGMNMLTGRFARETGENAVAASMWFHIGANMDQRTRAYIGTMTAAALGVRDVGDESI 120
Query: 186 RYGLLDRNHKIKVEP 200
+
Sbjct: 121 LTIDDPEKANRAIGT 135
Score = 41.7 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 4/48 (8%), Positives = 16/48 (33%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
++ + +D +K +G+ +R+ + + +
Sbjct: 123 IDDPEKANRAIGTLDEALKKINKQRADLGAYQNRLKYTVIGVNVAAEN 170
>gi|2576267|emb|CAA75376.1| flagellin [Borrelia burgdorferi]
Length = 163
Score = 54.0 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 8/94 (8%), Positives = 28/94 (29%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + ++ I+ I+ + +G+ +R+ +
Sbjct: 66 GAQQPTPATAPTQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 125
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+ + + ++ ++ DA M E +
Sbjct: 126 NSTEYAIENLKASYAQIKDATMTDEVVAATTNSI 159
>gi|2576259|emb|CAA75372.1| flagellin [Borrelia burgdorferi]
Length = 159
Score = 54.0 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 8/94 (8%), Positives = 28/94 (29%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + ++ I+ I+ + +G+ +R+ +
Sbjct: 66 GAQQPTPATAPTQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 125
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+ + + ++ ++ DA M E +
Sbjct: 126 NSTEYAIENLKASYAQIKDATMTDEVVAATTNSI 159
>gi|196044977|ref|ZP_03112210.1| putative flagellar hook-associated protein FlgL [Bacillus cereus
03BB108]
gi|228926775|ref|ZP_04089843.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|196023979|gb|EDX62653.1| putative flagellar hook-associated protein FlgL [Bacillus cereus
03BB108]
gi|228832888|gb|EEM78457.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 287
Score = 54.0 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 15/168 (8%), Positives = 52/168 (30%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + ++ + + + E+ + +++ I
Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLTVQALNGT----NSEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEKPPFTEDGTYQGGPNDVNWQLNDGY 166
>gi|296102901|ref|YP_003613047.1| flagellar hook-associated protein FlgL [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295057360|gb|ADF62098.1| flagellar hook-associated protein FlgL [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 317
Score = 54.0 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/198 (11%), Positives = 52/198 (26%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + D +++S+G RV+ +D+ S A ++ S
Sbjct: 3 ISTQMMYDQNMRGITDSQSKWLSYGEQMSTGKRVNRPSDDPIAASQAVVLSQSQSQNSQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ A + KV + +S+ +++ K K+ S + LQ +
Sbjct: 63 ALARTFATQKVSLEDNVLSQVNAAITSAKEKLVNAGNGTLSDDDRLSLASDLQGIRDQLM 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ N G T + + + + +
Sbjct: 123 NLANSADGNGRYIFAGYKTEAPPFDSVTGDYNGGTQAISQQVDTARNMVISHTGQQIFES 182
Query: 184 TERYGLLDRNHKIKVEPQ 201
Sbjct: 183 ITSNAKELPGGGYGETNM 200
Score = 38.2 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 31/319 (9%), Positives = 76/319 (23%), Gaps = 5/319 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ G+ T + + S + +
Sbjct: 1 MRISTQMMYDQNMRGITDSQSKWLSYGEQMSTGKRVNRPSDDPIAASQAVVLSQSQSQNS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ K + + K + ++
Sbjct: 61 QFALARTFATQKVSLEDNVLSQVNAAITSAKEKLVNAGNGTLSDDDRLSLASDLQGIRDQ 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
A +G A G+ + +A ++ T+ + T ++
Sbjct: 121 LMNLANSADGNGRYIFAGYKTEAPPFDSVTGDYNGGTQAISQQVDTARNMVISHTGQQIF 180
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ E + +I + + A + A+ + I
Sbjct: 181 ESITSNAKELPGGGYGETNMFKILDSAISALKVPVDNDSAAAEVQNKAISDAQIGITNTQ 240
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+G+ + + ++ + + LVD D S + QQ A
Sbjct: 241 NNVLTVVADVGTKMNELEKLDNLGDDRALGQTQQMSDLVDVDWNSAISSY----IMQQAA 296
Query: 433 VQALSIVNNSTARILSLFR 451
+QA + +SLF+
Sbjct: 297 LQASYKAFSDMQG-MSLFQ 314
>gi|227328345|ref|ZP_03832369.1| flagellar hook-associated protein FlgL [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 317
Score = 54.0 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 60/143 (41%), Gaps = 5/143 (3%)
Query: 8 HSAMSASQKLRDI---NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
++M Q ++ I + +++SSG RV + +D+ + A ++ S +
Sbjct: 4 STSMMYQQNMQGIINGQATWQKTGEQLSSGKRVVNPSDDPIAAASAIMLGQAQSENSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE--RGTDSKSIQSEITQLQSQLRDI 122
A + + ++ +SK+ + +S+ ++ G D KS+ + + ++++L ++
Sbjct: 64 LARTFAKQSMSLEESILSKSTNTISSALTEVIKGGGVLNDDDRKSVAAALRGMKAELLNM 123
Query: 123 ARGSSFNGENWLRTDLGSSTASI 145
A + NG +
Sbjct: 124 ANSTDGNGNYIFSGYETDKVPFV 146
Score = 42.0 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 60/199 (30%), Gaps = 9/199 (4%)
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
N+T G G + I + + + TV+ VG+T +
Sbjct: 122 NMANSTDGNGNYIFSGYETDKVPFVEGAAGIEYKGGYQAISQRVDAARDMTVSHVGSTVF 181
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF----IDTQI 372
T + + ++ + + + K + + ++
Sbjct: 182 NGVTGDAKKEPDGSIQSDLFETLDIAIKALETPLDGANDTTKANVAAALETANRGLNNSF 241
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+A ++G + I + K A + + +L D D + QQ +
Sbjct: 242 NNISAVRAELGIQLNEIDNLDAVGKDRDVANKTALSQLQDTDWYEAISSY----IMQQSS 297
Query: 433 VQALSIVNNSTARILSLFR 451
+QA + +SLF+
Sbjct: 298 LQASYTAFQNMQG-MSLFQ 315
>gi|292487946|ref|YP_003530821.1| flagellar hook-associated protein 3 [Erwinia amylovora CFBP1430]
gi|292899165|ref|YP_003538534.1| flagellar hook-associated protein 3 [Erwinia amylovora ATCC 49946]
gi|291199013|emb|CBJ46124.1| flagellar hook-associated protein 3 [Erwinia amylovora ATCC 49946]
gi|291553368|emb|CBA20413.1| Flagellar hook-associated protein 3 [Erwinia amylovora CFBP1430]
gi|312172067|emb|CBX80324.1| Flagellar hook-associated protein 3 [Erwinia amylovora ATCC
BAA-2158]
Length = 321
Score = 53.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/213 (10%), Positives = 55/213 (25%), Gaps = 3/213 (1%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
Q ++ N + + +++G RV+ +D+ + A ++ S A +
Sbjct: 14 QGIQTANSSWLKAGNELATGNRVNKPSDDPVAAAQAVVLSQAQSETSQYETARVFATQNQ 73
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL---QSQLRDIARGSSFNGE 131
+ + + DV+ + + + A + S TQL + QL ++A + NG
Sbjct: 74 STEETTLKQVADVVISAQTTVVAASTGTLSDEDRASFATQLEGIRGQLLNLANSTDGNGR 133
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
+ + + D + +
Sbjct: 134 YTFAGYQSDKAPFTSDAGGQITYIGGTIPITQKVDASRTLVTNHTGKQVFDSLTSDAVKE 193
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
+ K
Sbjct: 194 PDGAAGESNIFTILNTAIKSLKVSLTGADKATA 226
>gi|118477175|ref|YP_894326.1| flagellar hook-associated protein FlgL [Bacillus thuringiensis str.
Al Hakam]
gi|218902854|ref|YP_002450688.1| putative flagellar hook-associated protein FlgL [Bacillus cereus
AH820]
gi|225863598|ref|YP_002748976.1| putative flagellar hook-associated protein FlgL [Bacillus cereus
03BB102]
gi|229121291|ref|ZP_04250522.1| Flagellar hook-associated protein 3 [Bacillus cereus 95/8201]
gi|229183931|ref|ZP_04311147.1| Flagellar hook-associated protein 3 [Bacillus cereus BGSC 6E1]
gi|118416400|gb|ABK84819.1| flagellar hook-associated protein 3 [Bacillus thuringiensis str. Al
Hakam]
gi|218537108|gb|ACK89506.1| putative flagellar hook-associated protein FlgL [Bacillus cereus
AH820]
gi|225788652|gb|ACO28869.1| putative flagellar hook-associated protein FlgL [Bacillus cereus
03BB102]
gi|228599583|gb|EEK57187.1| Flagellar hook-associated protein 3 [Bacillus cereus BGSC 6E1]
gi|228662136|gb|EEL17745.1| Flagellar hook-associated protein 3 [Bacillus cereus 95/8201]
Length = 287
Score = 53.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 15/168 (8%), Positives = 53/168 (31%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + ++ + + + E+ + +++ I
Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLTVQALNGT----NSEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G+ +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEKPPFTEDGTYQGGQNDVNWQLNDGY 166
>gi|254251199|ref|ZP_04944517.1| Flagellin [Burkholderia dolosa AUO158]
gi|124893808|gb|EAY67688.1| Flagellin [Burkholderia dolosa AUO158]
Length = 413
Score = 53.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/245 (13%), Positives = 73/245 (29%), Gaps = 3/245 (1%)
Query: 31 VSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMST 90
+SSG+ + ADN + A + + LS + + + + V+++
Sbjct: 30 ISSGVSLQTPADNPVGAAQAVQLSMTSATLSQYATNQNAALTSLQAEDQALQSVSSVLTS 89
Query: 91 IKNKIT---AGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
++ + G +D ++ +++ + QL + + G S+
Sbjct: 90 VQTLVVRAGDGSLSDSDRSALATQLQGYRDQLMTLGNSNDGAGNYLFAGLNNSTAPFTTS 149
Query: 148 SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
+ D+G + D + + G
Sbjct: 150 ANGSVSYIGDSGTRNVQISDTSTVSQGDTGAAVFMSVPSLGSAPVPAAGAANTGTGTIGA 209
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
V+V S + +F + T + A T P A +A SG +
Sbjct: 210 VTVTTPSVATNAHQFTITFGGTPAAPTYTVTDNSATPPTTTPAQAYTAGSAIALGSGMTV 269
Query: 268 SKSPS 272
+ S +
Sbjct: 270 AVSGT 274
>gi|116805574|gb|ABK27772.1| flagellin [Treponema phagedenis subsp. vaccae]
gi|116805576|gb|ABK27773.1| flagellin [Treponema phagedenis subsp. vaccae]
Length = 170
Score = 53.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 3/112 (2%)
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARG 125
G S + +A++ + + DV+ I+ D IQ E++QL +++ IA
Sbjct: 1 NGISFIQVAESYLQETTDVIQRIRELSVQSANGIYSAEDRMYIQVEVSQLVAEIDRIASH 60
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ FNG N L T + F N + + + +
Sbjct: 61 AQFNGMNMLTGRFARETGENTVTASMWFHIGANMDQRTRAYIGTMTAAALGV 112
Score = 44.0 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 5/49 (10%), Positives = 16/49 (32%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
++ + +D IK +G+ +R+ + + +
Sbjct: 122 NIDDPEKANRAIGTLDEAIKKINKQRADLGAYQNRLEYTVIGVNVAAEN 170
>gi|253701097|ref|YP_003022286.1| flagellin domain protein [Geobacter sp. M21]
gi|251775947|gb|ACT18528.1| flagellin domain protein [Geobacter sp. M21]
Length = 272
Score = 53.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 41/86 (47%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ +DT I + + + + I ++ F M + ++ G L ADM E +
Sbjct: 187 MALMDTAISTLRSNTQTLAANLNIITTRQSFTDQMINTLQTGADNLTLADMNEEGANMLM 246
Query: 425 LQTQQQLAVQALSIVNNSTARILSLF 450
LQT+Q L +LS+ + + IL LF
Sbjct: 247 LQTRQSLGTTSLSLSSQAAQSILKLF 272
Score = 51.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/228 (15%), Positives = 72/228 (31%), Gaps = 2/228 (0%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I + L++ + L Q RVSSG +V+ A DN + AQ LS
Sbjct: 4 SDIYLTAGMRTNLLYLQNTSQLLNRTQQRVSSGKQVNSALDNPTNYFAAQNATQRASDLS 63
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQL 119
D++ V+ AG++ +++ K + + S+ ++SQ+
Sbjct: 64 DRKDSMSEAVQTVNATNAGITAITGLINAAKGVAQSALSTNDTVTRSKLASQYDTIRSQI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+I+ S + G N L + + + G ++ +
Sbjct: 124 DNISSDSGYRGLNLLSNINTLTVNFNEDATSKLNVIGFLGNSTGLSLTSASGTWQANSNI 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+TD + +I + + + A
Sbjct: 184 TTDMALMDTAISTLRSNTQTLAANLNIITTRQSFTDQMINTLQTGADN 231
>gi|228920450|ref|ZP_04083795.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228839080|gb|EEM84376.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 296
Score = 53.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/168 (10%), Positives = 54/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 12 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 71
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + ++ ++ + E+ + +++ I
Sbjct: 72 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQ----ALSEQNGEKELKAIGAEIDQIL 127
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K GK +
Sbjct: 128 KQVVYLANTKEQGRYIFGGDSAEKPPFTEDGTYQGGKNDVNWQLNDGY 175
>gi|228952119|ref|ZP_04114214.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228807651|gb|EEM54175.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 287
Score = 53.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 52/168 (30%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + ++ + + + E+ + ++ I
Sbjct: 63 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQALNGT----NSEKELQAIGVEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S GK +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAKNPPFTEDGTYQGGKNDVNWQLNDGY 166
>gi|228964722|ref|ZP_04125829.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228794972|gb|EEM42471.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 296
Score = 53.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 53/168 (31%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 12 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 71
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + ++ ++ + E+ + +++ I
Sbjct: 72 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQ----ALSEQNGEKELKAIGAEIDQIL 127
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S GK +
Sbjct: 128 KQVVYLANTKEQGRYIFGGDSAENPPFTEDGTYQGGKNDVNWQLNDGY 175
>gi|225569937|ref|ZP_03778962.1| hypothetical protein CLOHYLEM_06032 [Clostridium hylemonae DSM
15053]
gi|225161407|gb|EEG74026.1| hypothetical protein CLOHYLEM_06032 [Clostridium hylemonae DSM
15053]
Length = 332
Score = 53.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/321 (9%), Positives = 73/321 (22%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN + L LE + + +G R S + ++ + + A I+++
Sbjct: 1 MMRITTNMIRRNYQNNLNSTLSGLEQARRQAETGRRFSKSYEDPSAAAKATILENRYARN 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+A+ D + + + + + GT++ + + +
Sbjct: 61 GDYRNAVEDTMKWQDTQEDVLMQLGKIAEEVNKNYGVEAVSGTNASVRDTYAATFREMQK 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + + + + + V L +
Sbjct: 121 SMIYALNTKYGDTFAMAGSDGQNAPFELKEDGTVTYRGLDVNDPANTDALKALSREHSYI 180
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
G +V T + FD
Sbjct: 181 DLGFGLTFDGGGEIVSSSAFDAAFPGIKAVGFGQSDDGTSNNIIVLMGQMADVLEEDNFD 240
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+A A N + + + +T N ++
Sbjct: 241 EAAYKKLWTQFDKGAGDLQNCLTEIGTKTKLLSSTKDRLENEKLNITTQFDSTVNINEAE 300
Query: 301 PGYTNSTVAKVGNTHYYVDTE 321
S V N + T
Sbjct: 301 ALMNFSYAQYVYNVALKIGTS 321
>gi|332296508|ref|YP_004438431.1| flagellar hook-associated protein 3 [Thermodesulfobium narugense
DSM 14796]
gi|332179611|gb|AEE15300.1| flagellar hook-associated protein 3 [Thermodesulfobium narugense
DSM 14796]
Length = 291
Score = 53.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/274 (9%), Positives = 63/274 (22%), Gaps = 2/274 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M+ + N + L + ++ +SSG + DN + K +
Sbjct: 1 MSRVTMNMMINQFNSDLNNQLISIAKDSYELSSGNAIQLPQDNPVSNNYIMSFKEKINGI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSE--ITQLQSQ 118
+ + I G S ++ + ++ +++ G E + L+
Sbjct: 61 NNYQNNITAGQSILNSTDSALTSISTILNNANTIALQGANVTNQDSLASLEKSVEALKQS 120
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
L +A S N + + S+ S+ + ++ D
Sbjct: 121 LLSVANTSVGNTYIFAGSKSSSAPFSLDSNGNVVYLGDSASINYSVEPGATTTVNIDGTQ 180
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
L D+ + +L +
Sbjct: 181 LLPIFKALDNLQLALKSGNQVTISNTVSDIQNAIKTVNDLQSIVGSRQNMMQYLSNYYSN 240
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
P + + +
Sbjct: 241 ALTNYNSILANYQDVDFPTVVTDYATRQTAYQAA 274
Score = 44.3 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 33/95 (34%), Gaps = 2/95 (2%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
++ + VS I IK +GS + + ++ + D D
Sbjct: 199 NQVTISNTVSDIQNAIKTVNDLQSIVGSRQNMMQYLSNYYSNALTNYNSILANYQDVDFP 258
Query: 417 SESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ T + QT Q A++ + + +++ +
Sbjct: 259 TVVTDYATRQTAYQAALKVGAQI--LPQSLVNYLQ 291
>gi|228978343|ref|ZP_04138720.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis Bt407]
gi|228781360|gb|EEM29561.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis Bt407]
Length = 296
Score = 53.6 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 53/168 (31%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 12 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 71
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + ++ ++ + E+ + +++ I
Sbjct: 72 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQ----ALSEQNGEKELKAIGAEIDQIL 127
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S GK +
Sbjct: 128 KQVVYLANTKEQGRYIFGGDSAENPPFTEDGTYQGGKNDVNWQLNDGY 175
>gi|291276907|ref|YP_003516679.1| flagellar hook-associated protein 3 [Helicobacter mustelae 12198]
gi|290964101|emb|CBG39945.1| flagellar hook-associated protein 3 [Helicobacter mustelae 12198]
Length = 829
Score = 53.6 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/299 (9%), Positives = 85/299 (28%), Gaps = 5/299 (1%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
T ++ M+ Q + L ++++SGL++ +++ ++ + + LS D
Sbjct: 7 TKYNQMNYHQN--TLQDKLNETNNKIASGLKIKHGYQDSSVYNQDLKLGYLSNTLSQGID 64
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDI 122
+K A +S+ + K K+ T ++I ++ +++ + ++
Sbjct: 65 VAKSAHTKTLNADKTLSEMSKALVQFKTKMIQAANNVHSETSREAIALDLKAIKNHIINM 124
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A S + + + G+ T+ Y + + + + +D
Sbjct: 125 ANTSIGGEYIFGGSKVDRPPFDQNGRYYGNDETLYALVGSDNTVPYNITGKQLFFSTDSD 184
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + D L G + +
Sbjct: 185 KHRVITSNVKMFNQTKLHPDVMDPINKSEIPKEVYIKATDSLRDLVGDDDDDPSNDGKEY 244
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ + A + ++P+ ++ + +D
Sbjct: 245 FYVRGVGTNGKAFKTKFSLGKSYVNPENPTTVQDLLTKIGEAYGNTSQSRVVDVSLNDW 303
>gi|197118147|ref|YP_002138574.1| flagellin [Geobacter bemidjiensis Bem]
gi|197087507|gb|ACH38778.1| flagellin [Geobacter bemidjiensis Bem]
Length = 272
Score = 53.6 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 41/86 (47%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ +DT I + + + + I ++ F M + ++ G L ADM E +
Sbjct: 187 MALMDTAISTLRSNTQTLAANLNIITTRQSFTDQMINTLQTGADNLTLADMNEEGANMLM 246
Query: 425 LQTQQQLAVQALSIVNNSTARILSLF 450
LQT+Q L +LS+ + + IL LF
Sbjct: 247 LQTRQTLGTTSLSLSSQAAQSILKLF 272
Score = 50.5 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/225 (14%), Positives = 71/225 (31%), Gaps = 2/225 (0%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I + L++ + L Q RVSSG +V+ A DN + A+ LS
Sbjct: 4 SDISLTAGMRTNLLYLQNTSQLLNRTQQRVSSGKQVNSALDNPTNYFAAKNATQRASDLS 63
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQL 119
D + V+ AG++ +++ K + + S+ ++SQ+
Sbjct: 64 DRKDGMSEAVQTVNATNAGLTAITGLINAAKGVAQSALSTSDTITRAKLASQYDTIRSQI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+I+ S + G N L + + + + G ++ +
Sbjct: 124 DNISSDSGYRGLNLLSSINTLTVNFNEDATSKLNVIGFLGNSIGLSLTAASGTWQANSNI 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
+TD + +I + + +
Sbjct: 184 TTDMALMDTAISTLRSNTQTLAANLNIITTRQSFTDQMINTLQTG 228
>gi|116805584|gb|ABK27777.1| flagellin [Treponema phagedenis subsp. vaccae]
Length = 170
Score = 53.6 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 3/112 (2%)
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARG 125
G S + +A++ + + DVM I+ D IQ E++QL +++ IA
Sbjct: 1 NGISFIQVAESYLQETTDVMQRIRELSVQSANGIYSAEDRMYIQVEVSQLVAEIDRIASH 60
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ FNG N L T A + F N + + + +
Sbjct: 61 AQFNGMNMLTGRFARETGENAVAASMWFHIGANMDQRTRAYIGTMTAAALGV 112
Score = 44.0 bits (101), Expect = 0.054, Method: Composition-based stats.
Identities = 5/49 (10%), Positives = 16/49 (32%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
++ + +D IK +G+ +R+ + + +
Sbjct: 122 NIDDPEKANRAIGTLDEAIKKINKQRADLGAYQNRLEYTVIGVNVAAEN 170
>gi|227112528|ref|ZP_03826184.1| flagellar hook-associated protein FlgL [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 317
Score = 53.6 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 59/145 (40%), Gaps = 5/145 (3%)
Query: 8 HSAMSASQKLRDI---NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
++M Q ++ I + +++SSG RV + +D+ + A ++ +
Sbjct: 4 STSMMYQQNMQGIINGQATWQKTGEQLSSGKRVVNPSDDPIAAASAIMLGQAQSENGQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE--RGTDSKSIQSEITQLQSQLRDI 122
A + + ++ +SK+ + +S+ ++ G D KS+ + + ++++L ++
Sbjct: 64 LARTFAKQSMSLEESILSKSTNTISSALTEVIKGGGVLNDDDRKSVATALRGMKAELLNM 123
Query: 123 ARGSSFNGENWLRTDLGSSTASIAK 147
A + NG +
Sbjct: 124 ANSTDGNGNYIFSGYDTDKVPFVDG 148
Score = 42.0 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 61/199 (30%), Gaps = 9/199 (4%)
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
N+T G G + I + + + TV+ VG+T +
Sbjct: 122 NMANSTDGNGNYIFSGYDTDKVPFVDGGAGIAYQGGYQAISQRVDAARDMTVSHVGSTVF 181
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF----IDTQI 372
T + + ++ + + + K ++ + ++
Sbjct: 182 NGVTGDAKKEPDGSVQSDLFETLDIAIKALETPLDGANDATKASVAAALETANRGLNNSF 241
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+A ++G + I + K A + + +L D D + QQ +
Sbjct: 242 NNISAVRAELGIQLNEIDNLDAVGKDRDVANKTALSQLQDTDWYEAISSY----IMQQSS 297
Query: 433 VQALSIVNNSTARILSLFR 451
+QA + +SLF+
Sbjct: 298 LQASYTAFQNMQG-MSLFQ 315
>gi|241761144|ref|ZP_04759233.1| flagellin domain protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241374763|gb|EER64224.1| flagellin domain protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 285
Score = 53.6 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/214 (11%), Positives = 67/214 (31%), Gaps = 9/214 (4%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I ++ S+M + + Q++V++ R+ +D+ ++
Sbjct: 4 MFGINSSISSML------STDSAIASYQNQVNTKKRIQQPSDDPVASQQIDTLRRSLSGN 57
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+A + ++ D + A +S +S+I+NK+ + + + EI+
Sbjct: 58 TAYQKNVSTATAVSDQSNAALSDISTQLSSIQNKLQQAMNGTSSSSTRDILAKEISTATD 117
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ + NG + + +V T + +
Sbjct: 118 QIDSYKTTTDTNGNSLFPANSSQLITYPIGDSRSVAATLTQSQVFNFTASSGSSAGSTVD 177
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
S+ + + + + + +S
Sbjct: 178 LSTLLQNTQTAIKNNDSSAMGDALNQIQDAISHM 211
>gi|116805566|gb|ABK27768.1| flagellin [Treponema medium subsp. bovis]
gi|116805568|gb|ABK27769.1| flagellin [Treponema medium subsp. bovis]
gi|116805570|gb|ABK27770.1| flagellin [Treponema medium subsp. bovis]
gi|116805572|gb|ABK27771.1| flagellin [Treponema medium subsp. bovis]
gi|116805594|gb|ABK27782.1| flagellin [Treponema medium]
Length = 170
Score = 53.6 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 46/135 (34%), Gaps = 3/135 (2%)
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARG 125
G S + +A+A + + DVM I+ D IQ E++QL +++ IA
Sbjct: 1 DGISFIQVAEAFLQETTDVMQRIRELSVQSSNGIYSAEDRLYIQVEVSQLVAEVDRIASH 60
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+ FNG N L T + F N ++ + + + + D +
Sbjct: 61 AQFNGMNMLTGRFARETGENTVTASMWFHIGANMDQRVRAYVGTMTAKALGVRDIGDESI 120
Query: 186 RYGLLDRNHKIKVEP 200
+
Sbjct: 121 LTIDTPETANRAIGT 135
Score = 44.7 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 7/48 (14%), Positives = 16/48 (33%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + ID IK +G+ +R+ + I + +
Sbjct: 123 IDTPETANRAIGTIDEAIKKINKQRADLGAYQNRLEMSVVGINVAAEN 170
>gi|322417642|ref|YP_004196865.1| flagellin domain-containing protein [Geobacter sp. M18]
gi|320124029|gb|ADW11589.1| flagellin domain protein [Geobacter sp. M18]
Length = 272
Score = 53.2 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/235 (14%), Positives = 71/235 (30%)
Query: 216 TISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAA 275
+++ A A+ + + T+ T + A
Sbjct: 38 QVNSALDNPTNYFAAQNANQRASDLSDRKDGMSEAVQTVSATNAGITAITGLINAAKGIA 97
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
+ A ++I + +S G T +
Sbjct: 98 QSALSTSDTGVQSKLAVQYDTIRTQIDNISSDSGYRGLNLLSSTNTLTVNFNEDATSSLK 157
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
G+ + ++ + + + + +DT I + + + I +++F
Sbjct: 158 VVGFLANSSGLSLSGASGNWQTTSNITTDTAKMDTAISTLRTNTQTLAANLNIITTRQNF 217
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
M ++ G L ADM E + LQT+Q L +LS+ + + +L LF
Sbjct: 218 TDDMISTLQTGADNLTLADMNQEGANMLMLQTRQSLGTTSLSMSSQAAQSVLKLF 272
Score = 49.7 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 2/140 (1%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I + L+ + L Q+R+SSG +V+ A DN + AQ LS
Sbjct: 4 SDISLTAGMRTNLLNLQQTSKLLNRTQERLSSGKQVNSALDNPTNYFAAQNANQRASDLS 63
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQL 119
D + V AG++ +++ K + + + +++Q+
Sbjct: 64 DRKDGMSEAVQTVSATNAGITAITGLINAAKGIAQSALSTSDTGVQSKLAVQYDTIRTQI 123
Query: 120 RDIARGSSFNGENWLRTDLG 139
+I+ S + G N L +
Sbjct: 124 DNISSDSGYRGLNLLSSTNT 143
>gi|4583376|gb|AAD25047.1|AF116904_1 flagellin [Borrelia sp.]
Length = 156
Score = 53.2 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 11/138 (7%), Positives = 37/138 (26%)
Query: 291 ATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHA 350
T + + ++ + N E + +
Sbjct: 18 WTLRVHVGANQDEAIAVNIYASNVANLFAGEGAPAQEIGQQEEGQAAPAPAAAPAQGGVN 77
Query: 351 NTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ + ++ I+ I+ + +G+ +R+ + + + ++ ++
Sbjct: 78 SPINVTTAVDANMSLAKIEGAIRMVSDQRANLGAFQNRLESIKGSTEYAIENLKASYAQI 137
Query: 411 VDADMASESTRLSALQTQ 428
DA M E +
Sbjct: 138 KDATMTDEVVASTTHSIL 155
>gi|167567757|ref|ZP_02360673.1| flagellar hook-associated protein FlgL [Burkholderia oklahomensis
EO147]
gi|167574708|ref|ZP_02367582.1| flagellar hook-associated protein FlgL [Burkholderia oklahomensis
C6786]
Length = 303
Score = 53.2 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/194 (11%), Positives = 55/194 (28%), Gaps = 3/194 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + R+++ R+ +D+ ++ +GA D IG +S++ +A
Sbjct: 17 QRAQSQIADAMVRMATRQRILRTSDDVIGSVRLALLIQQDGAREQYRDNIGKLTSRLQLA 76
Query: 78 KAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
++ M+ + +++ + G + D +I + L+ L A G
Sbjct: 77 ESRMTGLGTGLGDVRDLLLWASDGSKPPQDLPAIAQTLETLRRSLVATANAKDGEGNYLF 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+ R D T + + + +
Sbjct: 137 SGTAIKTQPIQYDETKPVGSRYTYAGNDKQQEVIVGDGMTEVANDNMKEMADLLNKLEHA 196
Query: 195 KIKVEPQVLKDIDV 208
+ D
Sbjct: 197 IETMNTPGADPNDD 210
>gi|254458028|ref|ZP_05071455.1| flagellar hook-associated protein [Campylobacterales bacterium GD
1]
gi|207085421|gb|EDZ62706.1| flagellar hook-associated protein [Campylobacterales bacterium GD
1]
Length = 690
Score = 53.2 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 48/411 (11%), Positives = 115/411 (27%), Gaps = 18/411 (4%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
++ NL V +++SGL++ A DN ++ + ++ L V + G +
Sbjct: 12 SKLSQNLFDVNKQIASGLQIQYAKDNVRTFAETMRLDNELATLGQVKMSTQSGYKVSNQT 71
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ---SQLRDIARGSSFNGENWL 134
+++ M+ ++ + D+ S+ S +L+ S + +A S +
Sbjct: 72 DVILNEFETTMNRMRTLLLQAANGTNDATSLDSVAKELRGIESHFKGLANSSINGQYLFS 131
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
T + + + +G+ ++ T Y + + L
Sbjct: 132 GTAVDIKPIADDGTYMGNDKSMNSFTGSKTQQQYNISGGDLFLGEEVLVRREITSNVPQE 191
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ + L + + S + T + A F +
Sbjct: 192 NLIRKYPALGLPTANTTHMNPDNSIRDLMGDTDNVIDTVNAKHHFYLRGTKSDGTAFNKK 251
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
+ + + + +++ N +
Sbjct: 252 ISMRDDEKVDELLIQIGNAYGNTPALKLVNVTLNQSGQIVVEDKIKGSSQIDFHMVGAVD 311
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ T + + + T T K ++ T I
Sbjct: 312 FTGGAAANVTNLDALGVGESDFDRIMLSTSTATNPNLHVKEFIKSSLTSAGDVAGTNIIE 371
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD--MASESTRLS 423
G++ R ++ + V ++V AD A+ ST+LS
Sbjct: 372 --------GTVYDRTQFSKN-----GSTLSSSVPQIVKADNSFAAGSTKLS 409
Score = 43.2 bits (99), Expect = 0.082, Method: Composition-based stats.
Identities = 32/299 (10%), Positives = 85/299 (28%), Gaps = 4/299 (1%)
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
+ + + ++S+ + V D P LD++
Sbjct: 373 TVYDRTQFSKNGSTLSSSVPQIVKADNSFAAGSTKLSEVADISQLPNVGSLDATQFKLTG 432
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
++ + ++++ + + ++A +
Sbjct: 433 INVIGVAYDVQIDLATAGSTFTVGGNTYDIFNMGTPRVAVAADDMTYQQLMDVVNMVVTN 492
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
+P A N + + + ++ +AT T+ +N
Sbjct: 493 NLPSTTNVATDYDNAVKASKFNGNTFLSYDGKLKFQDIGTSSTQATMALHDTNSGDISNP 552
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
N + + D K L V + ++ + +E ++
Sbjct: 553 ASVMTFNANNGLTVRDPKTDFFKTLN----EMIIAVENHKLYPDSSGGVIRNVGIENAIT 608
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+D A +GS S+ + + ++ +L+ + ++D D+A S L+ L
Sbjct: 609 MMDDLQDHVFRAHSLVGSQSNALTMAQERTELLEISTSTLRSAVIDTDLAKASLTLTQL 667
>gi|4760497|dbj|BAA77309.1| flagellin [Pseudomonas putida]
Length = 94
Score = 53.2 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 20/60 (33%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ + +D I + ++G++ +R + + + R+ DA
Sbjct: 35 NILNAADSQVAIQALDAAIAQVDSQRAQLGAVQNRFDSTVANLNSISENSTAARSRVQDA 94
>gi|268679601|ref|YP_003304032.1| flagellin domain protein [Sulfurospirillum deleyianum DSM 6946]
gi|268617632|gb|ACZ11997.1| flagellin domain protein [Sulfurospirillum deleyianum DSM 6946]
Length = 801
Score = 53.2 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/284 (10%), Positives = 85/284 (29%), Gaps = 3/284 (1%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
++ + R + L V ++ SG ++ + + + + A + + L ++
Sbjct: 11 NSMRNYRTSSQKLYDVNQQIHSGSKIQQSYQDTSVYIDAMRLNYEITTLEQSIESSSKAK 70
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL---QSQLRDIARGSSF 128
S + ++ + K K+T S+++ L + +L ++A S
Sbjct: 71 SFANNIDTTLNSFTSKLDEFKTKLTQAANASNSQTSLEAIANDLEAYKEELINLANTSIN 130
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
+ + L + S + G+ + Y +D +++ L +D ++
Sbjct: 131 GQFLFSGSALSTKPISADGTYNGNAESLTAVVGSGVELTYNVDGKSLFLGKDSDYSKVVS 190
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
+ + D + +S T + G + ++
Sbjct: 191 TNVAMYNQTKLHPSIMDASGTDTSSSEVYLTGTDTIRDMVGDTDSDTTNDPNALFYLSGR 250
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRAT 292
++ +S A N+ + V
Sbjct: 251 DTAGETFATKIEMSTTSSVEDLMERIGQAYGNTSTNTLVDVSMN 294
Score = 37.4 bits (84), Expect = 4.7, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 39/86 (45%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ ++ ++ +D T A +IG++S+ + + + ++ V +V D+A
Sbjct: 711 NIGIQNALAQLDHITDHVTKAHTQIGALSNALTETQARAETLKVNVTTVQTEIVGIDLAE 770
Query: 418 ESTRLSALQTQQQLAVQALSIVNNST 443
L+ + + + A++ VN+ +
Sbjct: 771 AYLELTQVSNSYEAMLSAIAKVNSMS 796
>gi|255322352|ref|ZP_05363498.1| bacterial flagellin domain protein [Campylobacter showae RM3277]
gi|255300725|gb|EET79996.1| bacterial flagellin domain protein [Campylobacter showae RM3277]
Length = 748
Score = 53.2 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/357 (7%), Positives = 78/357 (21%), Gaps = 11/357 (3%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ L + ++SSGL++ ++ ++++ ++ + + L V A
Sbjct: 17 QTNMKALYKLNTQISSGLKIQNSFEDSSVYNDGMRLDYEVATLEQVQTATSKAQHFSKNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+ + + T K K+ G S ++ IA + +
Sbjct: 77 DKALGEFKQQLETFKTKLVQGANEIHSQTSREA-----------IANDLQGIKNHLVNIA 125
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
S + + NG + + + L
Sbjct: 126 NTSINGQFLFAGSAINTKPINGDTNEYFGNAQTMKAVGGAQVNLTYNQNGYELFLGKDGD 185
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+V + + + T + ++
Sbjct: 186 YNKKVTSNTMLKAQNLDDKNKTVYIDSEHKMRDLIGFKYVKDEKTLTNQDFTGTGVRQFQ 245
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
S + + + + +
Sbjct: 246 DTTFFLQGKKPNGTSFTSKFKMTSDASINNLLEKIGTEYGNTPTNKVVEVTINNQGQINV 305
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
D + + L + A++ ++ + ++ ++
Sbjct: 306 KDLSKGNQVIDFHMIAATKKVANADALAGGIAGASSAFDTVDSLTSGANPLEAMVQA 362
Score = 41.3 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/270 (11%), Positives = 63/270 (23%), Gaps = 11/270 (4%)
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T T N ++ + A +
Sbjct: 487 TTYTTEVWDSFYNDTTNPPTTEGRETQSKNMTFRQLNDIIGMVASDNVPAGAGGSAQADY 546
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
A A + K +V I + + + +
Sbjct: 547 VAYKQAIAKSQGSVEANMDHRGRIKVTDKQNAVTPIKVGIYDEVNSDQFYGDSTGTTPAT 606
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
S N +D+ S + D E + + H
Sbjct: 607 TQGDGSLWNFSANNGIEIDSPSVDIFDDLDRMIEAVRSGQYRADSESEHP------RNSG 660
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
++ + +D K+G+ ++ + +M V+ + +AD
Sbjct: 661 IQGAIERLDHIADHVNKIHTKVGNQTNTLIQTNTHASVMEVNVKTVKADITNADYGETYM 720
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
L Q +Q+++ +N LSL
Sbjct: 721 NLMQKMMSYQAMLQSVAKINQ-----LSLL 745
>gi|34556921|ref|NP_906736.1| flagellar hook-associated protein FlgL [Wolinella succinogenes DSM
1740]
gi|34482636|emb|CAE09636.1| FLAGELLIN B HOMOLOG (FLA) [Wolinella succinogenes]
Length = 846
Score = 53.2 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/383 (8%), Positives = 107/383 (27%), Gaps = 6/383 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + ++ ++ + L + ++SSG ++ ++ +S + + L+
Sbjct: 3 IGYSSQYLTLARYQQSSQLQLNDLLTQMSSGRKIQFGYQDSTIYSQTLRLDYEEATLTQS 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S D + +S+ M+ K+ T +++ +++ ++ +
Sbjct: 63 KTLSTSAKSFSDNTDSALSELSKSMTNFTTKLNQAANQIHSATSLEALANDLQAIKEHML 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE---TVLL 177
IA S + T + + + G+ + + Y +
Sbjct: 123 SIANTSIGGQYIFSGTAVTTKPFDSNGNYYGNDSSLEALLGSNNLLGYNITGAELFGGKD 182
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANA 237
+ K+ + + + + K L +
Sbjct: 183 SDKSRIIVTNVKNYNQSKLHPDIMDSLNKTGEPEEVYLKSTDKLRDLLGDNNDNPSDNPD 242
Query: 238 TFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
+ +G+ + + + + + GN+ +
Sbjct: 243 EWFYVQGVRPDGTSFKNKFSLSPSYTNEDSAATVQDLLDRIGREFGNTSTNKVVDVTLNE 302
Query: 298 TSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE 357
+ + T + Y + ++S D + + + + + T +
Sbjct: 303 YGEIQIKDLTTGRSNIDFYMISSDSNVDDLDELIESGARVKSYIQSPYLGDKTATQITST 362
Query: 358 KLAMEEMVSFIDTQIKCATAAAG 380
+ VS + T ++ + A
Sbjct: 363 NNYYDHRVSTLPTTLRTSNNAIA 385
Score = 38.2 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 12/160 (7%), Positives = 44/160 (27%)
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
++ + S + + + + + + +
Sbjct: 682 TRMSFMMYDSATDDYSATMDKSGSALTFHSNNTLTVDDPHVNFFAQLDSIIDSVRKGIYR 741
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
+ + ++ ++ + K G+ + + +++
Sbjct: 742 AGDVADGTYSSDLRSVGIQGGMTQFEHLSDHVNKVHAKNGAQGNAFKYSLERTEVLIVQT 801
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
+ +VD D+AS + L Q + ++S +N +
Sbjct: 802 KSLRSEVVDTDIASTYNDFAQLTLNYQAMLTSISKINQLS 841
>gi|56551500|ref|YP_162339.1| flagellin domain-containing protein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|56543074|gb|AAV89228.1| flagellin domain protein [Zymomonas mobilis subsp. mobilis ZM4]
Length = 285
Score = 53.2 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/214 (10%), Positives = 66/214 (30%), Gaps = 9/214 (4%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I ++ S+M + + Q+++ + ++ +D+ ++
Sbjct: 4 MFGINSSISSML------STDSAIASYQNQIDTKKKIQQPSDDPVASQQIDTLRRSLSGN 57
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+A + ++ D + A +S +S+I+NK+ + + + EI+
Sbjct: 58 TAYQKNVSTATAVSDQSNAALSDISTQLSSIQNKLQQAMNGTSSSSTRDILAKEISSATD 117
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ + NG + + +V T + +
Sbjct: 118 QIDSYKTTTDTNGNSLFPANSSQLITYPIGDSRSVAATLTQSQVFNFTASSGSSAGSTVD 177
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
S+ + + + + + +S
Sbjct: 178 LSTLLQNTQTAIKNNDSSGMNDALNQIQDAISHM 211
>gi|313650464|gb|EFS14871.1| flagellar hook-associated 3 domain protein [Shigella flexneri 2a
str. 2457T]
gi|332759645|gb|EGJ89950.1| flagellar hook-associated protein 3 domain protein [Shigella
flexneri 2747-71]
gi|332761430|gb|EGJ91714.1| flagellar hook-associated protein 3 domain protein [Shigella
flexneri K-671]
gi|332767692|gb|EGJ97885.1| flagellin hook associated protein [Shigella flexneri 2930-71]
gi|333019354|gb|EGK38637.1| flagellar hook-associated protein 3 domain protein [Shigella
flexneri K-304]
Length = 135
Score = 53.2 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 52/132 (39%), Gaps = 3/132 (2%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
T + + + +++S+G RV + +D+ S A ++ S +
Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRD 121
A + KV + ++ +S+ + + KI D S+ ++I L+ QL +
Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLN 123
Query: 122 IARGSSFNGENW 133
+A + NG
Sbjct: 124 LANTTDGNGRYI 135
>gi|229109196|ref|ZP_04238795.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock1-15]
gi|228674206|gb|EEL29451.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock1-15]
Length = 296
Score = 53.2 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 17/168 (10%), Positives = 54/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 12 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 71
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + ++ + + + E+ + +++ I
Sbjct: 72 QKDLADSKNVLTQTENTLQGIFKSLTRADQLTVQALNEP----NGEKELKAIGAEIDQIL 127
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S KS GK +
Sbjct: 128 KQVVYLANTKEQGRYIFGGDSAEKSPFTEDGTYQGGKNDVNWQLNDGY 175
>gi|224437569|ref|ZP_03658527.1| flagellar hook-associated protein FlgL [Helicobacter cinaedi CCUG
18818]
gi|313144023|ref|ZP_07806216.1| flagellar hook-protein FlgL [Helicobacter cinaedi CCUG 18818]
gi|313129054|gb|EFR46671.1| flagellar hook-protein FlgL [Helicobacter cinaedi CCUG 18818]
Length = 855
Score = 53.2 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/309 (8%), Positives = 84/309 (27%), Gaps = 3/309 (0%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L + +++SGL++ +++ ++ ++ + L D +
Sbjct: 20 QSKLMDINTKIASGLKIQYGYQDSSVFNQNLKLEYEKINLDQGIDVGNDAYTSTLNTDKA 79
Query: 81 MSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+++ K+ T ++I ++ +L+ + +IA S + ++
Sbjct: 80 LAELSQTAEQFNTKLIQAANDIHSPTSREAIARDLEKLKDHMINIANTSIGGEFLFAGSN 139
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ + G+ + I Y + + + +D + R
Sbjct: 140 VKIRPFEPDGTYKGNDETLEALVSNNNPIPYNITGQELFFGRDSDHHKSITTNIRKFNQT 199
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ D L G + + + + + +
Sbjct: 200 KLNNDIMDRIKRGDIPEEVYIKAGDTLRDLLGDNDDDTSNNGKEYFYLRGVRPDGTSFKS 259
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ G + + + + + G + GN +
Sbjct: 260 KFDFDVGYKNPNNATKVQDLLDKIGKEFGNTSKNKVVDVSLNFWGQIEIKNLQPGNANLD 319
Query: 318 VDTESTTLD 326
+ S+ +D
Sbjct: 320 FNLISSDMD 328
>gi|222099532|ref|YP_002534100.1| Flagellin [Thermotoga neapolitana DSM 4359]
gi|221571922|gb|ACM22734.1| Flagellin [Thermotoga neapolitana DSM 4359]
Length = 263
Score = 53.2 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 33/95 (34%), Gaps = 3/95 (3%)
Query: 47 WSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG---T 103
SI Q ++S + I G ++ A AG+ + +
Sbjct: 44 LSIQQRLRSQIEGYRSTLSQIYSGIGLLNTADAGLESITAAIQRARELAVQASSSTLTEN 103
Query: 104 DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ +Q E +++ +R + +++N L +
Sbjct: 104 ERSLLQEEYSRILQGIRRTIQQTTYNNRRILEGEN 138
Score = 40.5 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 11/98 (11%), Positives = 32/98 (32%), Gaps = 1/98 (1%)
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVD 412
+ ++ + ID ++ + G IG+ +R+ + + +
Sbjct: 166 FETDISRDSQQALRTIDQVLEEVSQTRGNIGAWMNRLEASARNVLNAYSELFRSESVFEP 225
Query: 413 ADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
A + +Q+ + L ++ +L+L
Sbjct: 226 A-AEKAMMEQIRNELLRQVTITGLLYRMENSRNVLNLL 262
>gi|154175012|ref|YP_001408167.1| lagellar hook-associated protein FlgL [Campylobacter curvus 525.92]
gi|112802834|gb|EAU00178.1| bacterial flagellin N-terminus domain protein [Campylobacter curvus
525.92]
Length = 740
Score = 53.2 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/355 (9%), Positives = 90/355 (25%), Gaps = 3/355 (0%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
++ + ++SSGL++ + +NA+ ++ A + + LS V +A
Sbjct: 11 QTLHDYQNSMAGVNKSYRQMSSGLKIQNPYENASVYNDAMRLDYEAETLSQVVEATSKSV 70
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQ---SQLRDIARGSSF 128
+ + + + K K+ S+++ +LQ + L +IA S
Sbjct: 71 NFSKNTDKSLQEFEKQLENFKTKVVQAASDVHSKTSLEALANELQGIKNHLVNIANTSIN 130
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
+ + + + G+ + Y + + L D ++
Sbjct: 131 GQFLFSGSAVDTKPIDGNGKYQGNRDYMKTSAGAQIELPYNIPGHDLFLGKDNDYSKILT 190
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
++ + + + + + +
Sbjct: 191 TNVSLTDNTKTDVSENPKYLTAQSKIKNMIGLNYANDSKNVDNQGKYAGSINPDYDFLDS 250
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
G+ S + + + N+ T+ +
Sbjct: 251 SNINFPDTYFYMQGKKPDGTSFTSKFKMTAGASVESLMEKIGQEFGNTATTKVVDVSINN 310
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
N + ++ N NT A E +A
Sbjct: 311 DGQFNIKDLTKGNQVIDFHMVAATSTATNKNAIAPNNALDGVNTLADLETMASTN 365
Score = 46.3 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 44/345 (12%), Positives = 92/345 (26%), Gaps = 5/345 (1%)
Query: 106 KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT 165
++I SQ+ + + + + R ++
Sbjct: 398 DKKDNKIIGTISQVVRKSGEYATDSTRLSEVAGIDKLYPKEQGKYNIDDRKLTMEIVSRN 457
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
Y + + + T ++ + DI + TK
Sbjct: 458 GTKYKVDIDLGHEEAPAQTAKFTISGTTSAGTPIAAQTFDIWHATEYGQFKTPTKDVTFR 517
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
+ AA+ A + + A G + +A +
Sbjct: 518 QINDIISMAASDNIPTANTYDNYNSAISLSKGAVEVNMNEKGKIELTDKTNAVSTIQVAA 577
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
+ K S ++ + + + T + ++ ++D V
Sbjct: 578 YDSTTNSDKFYGDSTGTTAATSQGRGSVFSFSENNAITIDEPSVNIFDDLDKMIEAVRQG 637
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
R + M+ + +D I A K+GS + I + LM+ V
Sbjct: 638 YYRSNAENGDPRNTGMQGALERLDHLIDHANKELTKVGSQTKLITSTNERASLMKVNVLT 697
Query: 406 GVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
++DAD A + Q +QA + +N LSL
Sbjct: 698 VKNEVIDADYAEAYLNFTQKTLSYQAMLQASAKINQ-----LSLL 737
>gi|197120107|ref|YP_002140534.1| flagellin [Geobacter bemidjiensis Bem]
gi|197089467|gb|ACH40738.1| flagellin [Geobacter bemidjiensis Bem]
Length = 272
Score = 53.2 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 42/270 (15%), Positives = 85/270 (31%)
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
T+ + N L + + +++ A A+
Sbjct: 3 TNEISLTAGMRTNLLNLQSTSTLLNRTQQRLSSGKQVNSALDNPTNYFAAQNANQRASDL 62
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + A T+ T + A + AT ++I S
Sbjct: 63 ADRKDGMSEGVQTVSAANAGITAITGLINAAKGIAQSALSTSDTLTRSKLATQYDTIRSQ 122
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
+S G T + G+ + ++ AN+ A+
Sbjct: 123 IDNISSDSGYRGLNLLSATNTLTVNFNENASSSLNVVGFLATSSGLSMGANSGAWATASD 182
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+ + +DT I + + + + I +++F M + ++ G L ADM E
Sbjct: 183 ITTDTAKMDTAISTLRSNTQTLAANLNIITTRQNFTDSMINTLQTGADNLTLADMNQEGA 242
Query: 421 RLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ LQT+Q L +LS+ + + +L LF
Sbjct: 243 NMLMLQTRQSLGTTSLSMSSQAAQTVLRLF 272
Score = 50.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/223 (14%), Positives = 71/223 (31%), Gaps = 2/223 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + L+ + L Q R+SSG +V+ A DN + AQ L+
Sbjct: 6 ISLTAGMRTNLLNLQSTSTLLNRTQQRLSSGKQVNSALDNPTNYFAAQNANQRASDLADR 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQLRD 121
D + G V A AG++ +++ K + + ++ ++SQ+ +
Sbjct: 66 KDGMSEGVQTVSAANAGITAITGLINAAKGIAQSALSTSDTLTRSKLATQYDTIRSQIDN 125
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I+ S + G N L + + + ++ D +T
Sbjct: 126 ISSDSGYRGLNLLSATNTLTVNFNENASSSLNVVGFLATSSGLSMGANSGAWATASDITT 185
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
D + + +I + + + ++
Sbjct: 186 DTAKMDTAISTLRSNTQTLAANLNIITTRQNFTDSMINTLQTG 228
>gi|260752893|ref|YP_003225786.1| flagellin domain protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552256|gb|ACV75202.1| flagellin domain protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 285
Score = 53.2 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/214 (10%), Positives = 66/214 (30%), Gaps = 9/214 (4%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I ++ S+M + + Q+++ + ++ +D+ ++
Sbjct: 4 MFGINSSISSML------STDSAIASYQNQIDTKKKIQQPSDDPVASQQIDNLRRSLSGN 57
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQS 117
+A + ++ D + A +S +S+I+NK+ + + + EI+
Sbjct: 58 TAYQKNVSTATAVSDQSNAALSDISTQLSSIQNKLQQAMNGTSSSSTRDILAKEISTATD 117
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
Q+ + NG + + +V T + +
Sbjct: 118 QIDSYKTTTDTNGNSLFPANSSQLITYPIGDSRSVAATLTQSQVFNFTASSGSSAGSTVD 177
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
S+ + + + + + +S
Sbjct: 178 LSTLLQNTQTAIKNNDSSGMNDALNQIQDAISHM 211
>gi|229069291|ref|ZP_04202581.1| Flagellar hook-associated protein 3 [Bacillus cereus F65185]
gi|228713778|gb|EEL65663.1| Flagellar hook-associated protein 3 [Bacillus cereus F65185]
Length = 296
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 54/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 12 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 71
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + ++ + + + E+ + +++ I
Sbjct: 72 QKDLADSKNVLTQTENTLQGIFKSLTRADQLTVQALNEP----NGEKELKAIGAEIDQIL 127
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S KS G+ +
Sbjct: 128 KQVVYLANTKEQGRYIFGGDSAEKSPFTEDGTYQGGQNDVNWQLNDGY 175
>gi|197285503|ref|YP_002151375.1| flagellar hook-associated protein 3 [Proteus mirabilis HI4320]
gi|227355994|ref|ZP_03840386.1| flagellar hook-associated protein 3 (hook-filament junction
protein) [Proteus mirabilis ATCC 29906]
gi|194682990|emb|CAR43431.1| flagellar hook-associated protein 3 (hook-filament junction
protein) [Proteus mirabilis HI4320]
gi|227163982|gb|EEI48884.1| flagellar hook-associated protein 3 (hook-filament junction
protein) [Proteus mirabilis ATCC 29906]
Length = 314
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/177 (12%), Positives = 55/177 (31%), Gaps = 4/177 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ +N + +++SSG RV +D+ S A ++K
Sbjct: 3 LSSNQIYTQRVDNITSSQSRWMTEGNKISSGRRVEKPSDDPMAASQAVMVKQSEARNQQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE----RGTDSKSIQSEITQLQSQL 119
+ A G + + + + S+ +++ + I+ + A D S+ +++ L+ QL
Sbjct: 63 ATARGFAKNSMSLQMSLSSQMVNITTKIQETLVAAGNDGALSDEDRASLAEQLSGLKDQL 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
I G +A + + ++
Sbjct: 123 VGIGNTKDGVGRYVFAGFQTDKPPFVADKTGKITYQGGDKQITQKVDSNIEMVSNFT 179
>gi|238794004|ref|ZP_04637622.1| Flagellar hook-associated protein 3 [Yersinia intermedia ATCC
29909]
gi|238726636|gb|EEQ18172.1| Flagellar hook-associated protein 3 [Yersinia intermedia ATCC
29909]
Length = 344
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 56/184 (30%), Gaps = 6/184 (3%)
Query: 8 HSAMSASQKLRDINYNLE---VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
++M Q ++ + ++SSG RV + +D+ S A ++ S +
Sbjct: 22 STSMLYQQNMQGVTNAQSLWMQSGQQLSSGKRVVNPSDDPMAASQAVMVSQAQSENSQYT 81
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRD 121
A + +++A + +I+ + + D S +++ L+ QL +
Sbjct: 82 LARSFARQSSSLETTVLAQATSTIQSIQTLVISAKSDILSDDDRASYATQLQGLKDQLVN 141
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
A + NG + + N ++ S
Sbjct: 142 QANTTDGNGRYIFAGFKSDKPPFAVSATGDVTYQGGNVAIEQKVDANRSITVGHTGSSVF 201
Query: 182 DGTE 185
Sbjct: 202 MALT 205
Score = 36.6 bits (82), Expect = 7.7, Method: Composition-based stats.
Identities = 25/314 (7%), Positives = 71/314 (22%), Gaps = 4/314 (1%)
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ ++ + T+ S + + + + + + +
Sbjct: 18 IMRLSTSMLYQQNMQGVTNAQSLWMQSGQQLSSGKRVVNPSDDPMAASQAVMVSQAQSEN 77
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
S + + + V Q I S S A
Sbjct: 78 SQYTLARSFARQSSSLETTVLAQATSTIQSIQTLVISAKSDILSDDDRASYATQLQGLKD 137
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ T + + S + V + + R+ T
Sbjct: 138 QLVNQANTTDGNGRYIFAGFKSDKPPFAVSATGDVTYQGGNVAIEQKVDANRSITVGHTG 197
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
S ++ AK ++ + + + S + + +
Sbjct: 198 SSVFMALTSNAKPEPDDAGGKPVASESNIFNTIDTVLKSLKVPLQGATDAVKDQATADMD 257
Query: 359 LAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+ + + + +IG+ + + ++ + L D D +
Sbjct: 258 KG----IRGLSNSLNNVLSVQAEIGTQLQELDNLDSLGSDRSLINKQRLSDLQDVDWTAA 313
Query: 419 STRLSALQTQQQLA 432
+ Q Q +
Sbjct: 314 ISSYVMQQAALQAS 327
>gi|167770234|ref|ZP_02442287.1| hypothetical protein ANACOL_01577 [Anaerotruncus colihominis DSM
17241]
gi|167667556|gb|EDS11686.1| hypothetical protein ANACOL_01577 [Anaerotruncus colihominis DSM
17241]
Length = 358
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/147 (13%), Positives = 46/147 (31%), Gaps = 3/147 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + + ++L + ++ SGL + +DN A A ++ +
Sbjct: 3 ITQRTISRNYKRQLNTVMTKRASTMEKGQSGLAFNRLSDNVAAGVRAMKVQEERLTSERQ 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIK---NKITAGVERGTDSKSIQSEITQLQSQLR 120
+ I + + ++ + + K G G + I EI L+ Q+
Sbjct: 63 LNTIENFREEFKTIDTNLDSIDSILVSARDKVEKALNGTNGGDPREVIAKEIGSLKKQIL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAK 147
A + T+ + +
Sbjct: 123 QFANSQYAGKFLFGGTNNAEAPFTDDG 149
>gi|197116506|ref|YP_002136933.1| flagellin [Geobacter bemidjiensis Bem]
gi|197085866|gb|ACH37137.1| flagellin [Geobacter bemidjiensis Bem]
Length = 272
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 55/137 (40%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ T + G+ + ++ AN+ A+ + + +DT I
Sbjct: 136 NLLSANNTLTVNFNENASSSLNVVGFLATSTGLSMGANSGAWATASDITTDTAKMDTAIS 195
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ + + + I +++F M + ++ G L ADM E + LQT+Q L
Sbjct: 196 TLRSNTQTLAANLNIITTRQNFTDSMINTLQTGADNLTLADMNQEGANMLMLQTRQSLGT 255
Query: 434 QALSIVNNSTARILSLF 450
+LS+ + + +L LF
Sbjct: 256 TSLSMSSQAAQSVLKLF 272
Score = 51.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/225 (14%), Positives = 74/225 (32%), Gaps = 2/225 (0%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I + L++ + L Q R+SSG +V+ A DN + AQ L+
Sbjct: 4 SDISLTAGMRTNLLNLQNTSQLLNRTQQRLSSGKQVNSALDNPTNYFAAQNANQRASDLA 63
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQL 119
D + G V A AG++ +++ K + + ++ ++SQ+
Sbjct: 64 DRKDGMSEGVQTVSAANAGITAITGLINAAKGIAQSALSTSDTLTRSKLATQYDTIRSQI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+I+ S + G N L + + + + ++ D
Sbjct: 124 DNISSDSGYRGLNLLSANNTLTVNFNENASSSLNVVGFLATSTGLSMGANSGAWATASDI 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
+TD + + +I + + + ++
Sbjct: 184 TTDTAKMDTAISTLRSNTQTLAANLNIITTRQNFTDSMINTLQTG 228
>gi|116805588|gb|ABK27779.1| flagellin [Treponema phagedenis subsp. vaccae]
Length = 170
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 3/112 (2%)
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARG 125
G S + +A++ + + DV+ I+ D IQ E++QL +++ IA
Sbjct: 1 NGVSFIQVAESYLQETTDVIQRIRELSVQSANGIYSAEDRMYIQVEVSQLVAEIDRIASH 60
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ FNG N L T + F N + + + +
Sbjct: 61 AQFNGMNMLTGRFARETGENTVTASMWFHIGANMDQRTRAYIGTMTAAALGV 112
Score = 44.3 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 5/49 (10%), Positives = 16/49 (32%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
++ + +D IK +G+ +R+ + + +
Sbjct: 122 NIDDPEKANRAIGTLDEAIKKINKQRADLGAYQNRLEYTVIGVNVAAEN 170
>gi|2576261|emb|CAA75373.1| flagellin [Borrelia burgdorferi]
Length = 158
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 8/94 (8%), Positives = 29/94 (30%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 65 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 124
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+ + + ++ ++ DA M E +
Sbjct: 125 NSTEYAIENLKASYAQIKDATMTDEVVAATTNSI 158
>gi|167750616|ref|ZP_02422743.1| hypothetical protein EUBSIR_01593 [Eubacterium siraeum DSM 15702]
gi|167656295|gb|EDS00425.1| hypothetical protein EUBSIR_01593 [Eubacterium siraeum DSM 15702]
Length = 319
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/290 (8%), Positives = 64/290 (22%), Gaps = 8/290 (2%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+L + +++S R + A+++ + A + + + +
Sbjct: 3 QLNAALERKNASERKINSTKRYNRASEDPISAAKALRTRKAISNTNDYLGNLETAEQIYN 62
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLRD-----IARGSS 127
A + + D++ I K+T + + ++ IA
Sbjct: 63 GADSVLMNVNDILDNIIEKVTYAANGTQHDEDEEILAQTVETFADEIVRLFNTDIAERRI 122
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
F G N T K++ + + ++ + D
Sbjct: 123 FGGVNNDTTIFKIENVGGKKTITYNGVDINSIDDPDKFPYSESSFTDIGTGMVIDPATGR 182
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ + S I A K + A
Sbjct: 183 VDPQSALPVTFNGAKITGCGKDDEGDSKNIIQITLDAAQAVREGDKIKAMDYIDKLRAAQ 242
Query: 248 IPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSI 297
V + A + + N + +
Sbjct: 243 TSVSVAHADIGNKQEYIEYNKNRLTNNMETLLEQQNNLEGTDMGAETTNW 292
Score = 39.7 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 25/65 (38%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+K+ + + + + A IG+ I ++ + + + + L DM
Sbjct: 227 DKIKAMDYIDKLRAAQTSVSVAHADIGNKQEYIEYNKNRLTNNMETLLEQQNNLEGTDMG 286
Query: 417 SESTR 421
+E+T
Sbjct: 287 AETTN 291
>gi|228938853|ref|ZP_04101453.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228971734|ref|ZP_04132355.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228787824|gb|EEM35782.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228820702|gb|EEM66727.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326939353|gb|AEA15249.1| flagellar hook-associated protein FlgL [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 287
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 53/168 (31%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + ++ ++ + E+ + +++ I
Sbjct: 63 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQ----ALSEQNGEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S GK +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAENPPFTEDGTYQGGKNDVNWQLNDGY 166
>gi|229102338|ref|ZP_04233046.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock3-28]
gi|229115180|ref|ZP_04244590.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock1-3]
gi|228668320|gb|EEL23752.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock1-3]
gi|228680985|gb|EEL35154.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock3-28]
Length = 287
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 53/168 (31%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + ++ + + + E+ + +++ I
Sbjct: 63 QKDLADSKNVLTQTENTLQGIFKSLTRADQLTVQALNEP----NGEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K GK +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEKQPFTEDGTYQGGKNDVNWQLNDGY 166
>gi|228958019|ref|ZP_04119755.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|296502339|ref|YP_003664039.1| flagellar hook-associated protein FlgL [Bacillus thuringiensis
BMB171]
gi|228801644|gb|EEM48525.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|296323391|gb|ADH06319.1| flagellar hook-associated protein FlgL [Bacillus thuringiensis
BMB171]
Length = 287
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 52/168 (30%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + ++ + + + E+ + ++ I
Sbjct: 63 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQALNGT----NSEKELQAIGVEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S GK +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAENLPFTEDGTYQGGKNDVNWKLNDGY 166
>gi|30019784|ref|NP_831415.1| flagellar hook-associated protein FlgL [Bacillus cereus ATCC 14579]
gi|229127065|ref|ZP_04256064.1| Flagellar hook-associated protein 3 [Bacillus cereus BDRD-Cer4]
gi|229144351|ref|ZP_04272757.1| Flagellar hook-associated protein 3 [Bacillus cereus BDRD-ST24]
gi|29895329|gb|AAP08616.1| Flagellar hook-associated protein 3 [Bacillus cereus ATCC 14579]
gi|228639138|gb|EEK95562.1| Flagellar hook-associated protein 3 [Bacillus cereus BDRD-ST24]
gi|228656418|gb|EEL12257.1| Flagellar hook-associated protein 3 [Bacillus cereus BDRD-Cer4]
Length = 287
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 52/168 (30%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + ++ + + + E+ + ++ I
Sbjct: 63 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQALNGT----NSEKELQAIGVEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S GK +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAENLPFTEDGTYQGGKNDVNWKLNDGY 166
>gi|218236044|ref|YP_002366424.1| flagellar hook-associated protein FlgL [Bacillus cereus B4264]
gi|218164001|gb|ACK63993.1| putative flagellar hook-associated protein FlgL [Bacillus cereus
B4264]
Length = 287
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/168 (10%), Positives = 54/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + ++ ++ + E+ + +++ I
Sbjct: 63 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQ----ALSEQNGEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K GK +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEKPPFTEDGTYQGGKNDVNWQLNDGY 166
>gi|115353110|ref|YP_774949.1| flagellar hook-associated protein FlgL [Burkholderia ambifaria
AMMD]
gi|115283098|gb|ABI88615.1| flagellar hook-associated protein 3 [Burkholderia ambifaria AMMD]
Length = 413
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/367 (13%), Positives = 100/367 (27%), Gaps = 4/367 (1%)
Query: 31 VSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMST 90
++SG+ + ADN + A + + LS + + + + V++
Sbjct: 30 IASGVSLQTPADNPVGAAQAVQLSMTSATLSQYATNQTAALASLQAEDQALQSVSGVLTG 89
Query: 91 IKNKITAGVERGTDSKSIQSEITQLQ---SQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
++ + + + TQLQ QL +A + G SS +
Sbjct: 90 VQTLVVRAGDGSLADSDRSALATQLQGYRDQLMTLANSNDGAGNYLFAGLNNSSAPFTSS 149
Query: 148 SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
D+G Q+ D + + G
Sbjct: 150 PNGSVSYVGDSGTRQVQIGDSSSVAQGDTGSAVFMSVPSLGSAPVPSAGAANTGTGTITA 209
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
V+V S + +F +A T + AK T P A A+ G +
Sbjct: 210 VTVTTPSAATNGHQFSIAFGGTPAAPTYTVTDNSAKPPTTTPAQAYTAGASIALGGGMTV 269
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
+ S + AA T+ A +++ S + V + T
Sbjct: 270 AVSGTPAAGDTFAVTPGPQASGGADIFSTLDSMISALKTPVTGNPVAAAALSNALMTGSI 329
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI-DTQIKCATAAAGKIGSIS 386
+ + + + A + S + D T + +
Sbjct: 330 KVGNTMRNVTTIQASVGGREQEVKAMQAVNQTASLQTTSNLTDLTSTNMTTTISQYLQVQ 389
Query: 387 SRIHLQE 393
+ + +
Sbjct: 390 NALTGAQ 396
>gi|220917709|ref|YP_002493013.1| flagellar hook-associated protein 3 [Anaeromyxobacter dehalogenans
2CP-1]
gi|219955563|gb|ACL65947.1| flagellar hook-associated protein 3 [Anaeromyxobacter dehalogenans
2CP-1]
Length = 294
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/136 (11%), Positives = 39/136 (28%), Gaps = 3/136 (2%)
Query: 19 DINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAK 78
L+ + +SG+RV D+ + + + A++ A S ++
Sbjct: 18 QARARLDRAVAQAASGVRVVHPGDDPGAAARIAAERVKVQRMDAIATATARASDELAAVD 77
Query: 79 AGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
A + + + ++ + T + E+ + + N
Sbjct: 78 AALGEVANGLARAQELATMFASAPYDAAQRAAGAREVRGILASAVASLGVKVGNRYLLGG 137
Query: 136 TDLGSSTASIAKSVIG 151
G+ + G
Sbjct: 138 FRDGAPPFDAGGAYQG 153
>gi|229166580|ref|ZP_04294332.1| Flagellar hook-associated protein 3 [Bacillus cereus AH621]
gi|228616834|gb|EEK73907.1| Flagellar hook-associated protein 3 [Bacillus cereus AH621]
Length = 287
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 14/168 (8%), Positives = 53/168 (31%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A ++ D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQMMDLNVQQQYHRNQVTSGKKNLFMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + ++ + + + E+ + +++ I
Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLTVQALNGT----NSEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S + GK +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEQVPFTEDGTYQGGKNDVNWQLNDGY 166
>gi|229096225|ref|ZP_04227198.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock3-29]
gi|228687185|gb|EEL41090.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock3-29]
Length = 287
Score = 52.8 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 53/168 (31%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + ++ + + + E+ + +++ I
Sbjct: 63 QKDLADSKNVLTQTENTLQGIFKSLTRADQLTVQALNEP----NGEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K GK +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEKQPFTEDGTYQGGKNDVNWQLNDGY 166
>gi|229149941|ref|ZP_04278169.1| Flagellar hook-associated protein 3 [Bacillus cereus m1550]
gi|228633622|gb|EEK90223.1| Flagellar hook-associated protein 3 [Bacillus cereus m1550]
Length = 287
Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 52/168 (30%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + ++ + + + E+ + ++ I
Sbjct: 63 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQALNGT----NSEKELQAIGVEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S GK +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAENLPFTEDGTYQGGKNDVNWKLNDGY 166
>gi|4760479|dbj|BAA77301.1| flagellin [Pseudomonas putida]
Length = 123
Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 9/95 (9%), Positives = 28/95 (29%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ ++ D S + + + + ++ ID I +
Sbjct: 29 SAKGYSVADGTVGTGATDLFGSASKSSAKTTIADTDVTDAVNAQNALAVIDKAIGSIDSV 88
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+G+ +R+ D ++ ++ + D
Sbjct: 89 RSGLGATQNRLQTTVDNLQNIQKNSTAARSTVQDV 123
>gi|229172386|ref|ZP_04299945.1| Flagellar hook-associated protein 3 [Bacillus cereus MM3]
gi|228610857|gb|EEK68120.1| Flagellar hook-associated protein 3 [Bacillus cereus MM3]
Length = 287
Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/168 (8%), Positives = 53/168 (31%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + ++ + + + E+ + +++ I
Sbjct: 63 QKDLADSKNVLTQTENTLQGIFKSLTRADQLTVQALNEP----NGEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G+ +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEKLPFTEDGTYQGGQNDVNWKLNDGY 166
>gi|228984823|ref|ZP_04144995.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229155310|ref|ZP_04283421.1| Flagellar hook-associated protein 3 [Bacillus cereus ATCC 4342]
gi|228628235|gb|EEK84951.1| Flagellar hook-associated protein 3 [Bacillus cereus ATCC 4342]
gi|228775021|gb|EEM23415.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 287
Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/168 (8%), Positives = 53/168 (31%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + ++ + + + E+ + +++ I
Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLTVQALNGT----NSEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G+ +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSTEKLPFTEDGTYQGGQNDVNWQLNDGY 166
>gi|228907372|ref|ZP_04071230.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis IBL
200]
gi|228852233|gb|EEM97029.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis IBL
200]
Length = 287
Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 53/168 (31%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + ++ ++ + E+ + +++ I
Sbjct: 63 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQ----ALSEQNGEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S GK +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAENPPFTEDGTYQGGKNDVNWQLNDGY 166
>gi|253688965|ref|YP_003018155.1| flagellar hook-associated protein 3 [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251755543|gb|ACT13619.1| flagellar hook-associated protein 3 [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 317
Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 60/145 (41%), Gaps = 5/145 (3%)
Query: 8 HSAMSASQKLRDI---NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
++M Q ++ I + +++S+G RV + +D+ + A ++ S +
Sbjct: 4 STSMMYQQNMQGIINGQATWQKTGEQLSTGKRVVNPSDDPIAAASAIMLGQAQSENSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE--RGTDSKSIQSEITQLQSQLRDI 122
A + + ++ ++K+ +++ ++ G D KS+ + + ++++L ++
Sbjct: 64 LARTFAKQSMSLEESILNKSSTTITSALTEVIKGGGVLNDDDRKSVATSLRGMKAELLNM 123
Query: 123 ARGSSFNGENWLRTDLGSSTASIAK 147
A + NG + +
Sbjct: 124 ANSTDGNGNYIFSGYETDNPPFVDG 148
Score = 42.0 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 31/320 (9%), Positives = 80/320 (25%), Gaps = 6/320 (1%)
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
+ ++ + G G+ T + + +S + +
Sbjct: 1 MRLSTSMMYQQNMQGIINGQATWQKTGEQLSTGKRVVNPSDDPIAAASAIMLGQAQSENS 60
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
+ + + + G + + A + + L
Sbjct: 61 QYTLARTFAKQSMSLEESILNKSSTTITSALTEVIKGGGVLNDDDRKSVATSLRGMKAEL 120
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+ + S + G + + S T
Sbjct: 121 LNMANSTDGNGNYIFSGYETDNPPFVDGATGIQYVGGNQAISQRVDSARNMTVGHTGSAV 180
Query: 313 NTHYYVDTESTTLDSRKDL-PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
D + S + + +D + + + N A+E ++
Sbjct: 181 FNGVTGDAKKEPDGSIQSDLFETLDIAIKALETPLADADDVTKANVAAALETANRGLNNS 240
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ ++ ++G + I + K A + + +L D D + QQ
Sbjct: 241 LNNISSVRAELGIQLNEIDNLDAVGKDRDVANKTTLSQLQDTDWYEAISSY----IMQQS 296
Query: 432 AVQALSIVNNSTARILSLFR 451
++QA + +SLF+
Sbjct: 297 SLQASYTAFQNMQG-MSLFQ 315
>gi|307293780|ref|ZP_07573624.1| flagellin domain protein [Sphingobium chlorophenolicum L-1]
gi|306879931|gb|EFN11148.1| flagellin domain protein [Sphingobium chlorophenolicum L-1]
Length = 281
Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 57/142 (40%), Gaps = 4/142 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ ++ + ++ + Q +S+G ++ ++NA W +
Sbjct: 1 MVGI-TNKILLAEIRRQQQLSQGIVDGQTAISTGKTLTRPSENALAWVQVSDIGRAQAQQ 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQS 117
+A I G+++ A+A + + +++ + +TA + S + E+ +++
Sbjct: 60 AAWQSNISTGTARAATAEANLDEMNTLLTRAQELLTAARNGSLNDASKTAIVEEMKTIRT 119
Query: 118 QLRDIARGSSFNGENWLRTDLG 139
+ + +NG
Sbjct: 120 TIDSLLNQKDYNGVPTFDDGQS 141
Score = 39.3 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 28/87 (32%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
+ + I K G S R+ + + + +++ L D+
Sbjct: 189 NDANVVAALDAIKAAQNHVVLEQTKQGVRSDRLDVIGTRLTDIDIDLKERRANLESTDLT 248
Query: 417 SESTRLSALQTQQQLAVQALSIVNNST 443
+ +SA Q A A + +N T
Sbjct: 249 EVISSVSAKLLQLDAAQSAFARINQQT 275
>gi|2576283|emb|CAA75371.1| flagellin [Borrelia burgdorferi]
Length = 159
Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 9/86 (10%), Positives = 29/86 (33%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + + ++ I+ I+ + +G+ +R+ +
Sbjct: 68 GAQQPAPVTAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 127
Query: 394 DFIKLMRDAVEKGVGRLVDADMASES 419
D + + ++ ++ DA M E
Sbjct: 128 DSTEYAIENLKASYAQIKDATMTDEV 153
>gi|34557457|ref|NP_907272.1| flagellin [Wolinella succinogenes DSM 1740]
gi|34483173|emb|CAE10172.1| FLAGELLIN [Wolinella succinogenes]
Length = 253
Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 37/122 (30%), Gaps = 3/122 (2%)
Query: 41 ADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE 100
+ + A A + S ++ + IA + D + A
Sbjct: 39 SQDGASLMSADALVSQISSMMQGVKNSNDAIGMLQIADGALGSVTDSTVRLSELSVAMGN 98
Query: 101 ---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDD 157
I+SE L + D ++FNG++ + + T+ + + +
Sbjct: 99 PALSSDQRSMIESEAKALTQSMNDAMGQATFNGKSVFGSSMSFVTSDSSLVDMTLNAPNT 158
Query: 158 NG 159
G
Sbjct: 159 AG 160
Score = 38.6 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 26/82 (31%)
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
I +K IGS + I D ++ L D D+A L+
Sbjct: 167 DSIQDFMKRVGQERANIGSTINGIQSLVDSHLTTVVNLKNAESNLQDNDVAENYNELNTA 226
Query: 426 QTQQQLAVQALSIVNNSTARIL 447
+ ++ A+ A S L
Sbjct: 227 KIREGAALYAQSFNAQYLQSKL 248
>gi|330721228|gb|EGG99330.1| Flagellar hook-associated protein FlgL [gamma proteobacterium
IMCC2047]
Length = 208
Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 57/208 (27%), Gaps = 5/208 (2%)
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
A T + + + SV + + T + +
Sbjct: 1 MVTNQAAYDAFYPDDAVITFTVAGPNTTYSVTRVSDGTAVSGGVPAQPLTNIPYVPGEAI 60
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
+V D + + + L + L+ + +
Sbjct: 61 AFEGIQLQVSGAPANGDVFTAVHSNPQKLDILSIVENLAIGLDTLGEGDAANLQRGELIS 120
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ + +D + KIG+ + I E + ++ + + D D + L
Sbjct: 121 DALISLDNAMTAINQTTSKIGARLNTIDSVESANEEIKLFHRNTLSDIEDLDYTEAISLL 180
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLF 450
+ Q A Q+ VNN LSLF
Sbjct: 181 TQSTFVLQAAQQSYLKVNN-----LSLF 203
>gi|197122917|ref|YP_002134868.1| flagellar hook-associated protein 3 [Anaeromyxobacter sp. K]
gi|196172766|gb|ACG73739.1| flagellar hook-associated protein 3 [Anaeromyxobacter sp. K]
Length = 294
Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/136 (11%), Positives = 38/136 (27%), Gaps = 3/136 (2%)
Query: 19 DINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAK 78
L+ + +SG+RV D+ + + + A++ A S ++
Sbjct: 18 QARARLDRAVAQAASGVRVVHPGDDPGAAARIATERVKVQRMDAIATATARASDELAAVD 77
Query: 79 AGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
A + + + ++ + T E+ + + N
Sbjct: 78 AALGEVANGLARAQELATMFASAPYDAAQRAGGAREVRGILASAVASLGVKVGNRYLLGG 137
Query: 136 TDLGSSTASIAKSVIG 151
G+ + G
Sbjct: 138 FRDGAPPFDAGGAYQG 153
>gi|32267194|ref|NP_861226.1| flagellar hook-associated protein FlgL [Helicobacter hepaticus ATCC
51449]
gi|32263247|gb|AAP78292.1| flagellar hook-associated protein FlgL [Helicobacter hepaticus ATCC
51449]
Length = 855
Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/255 (9%), Positives = 72/255 (28%), Gaps = 3/255 (1%)
Query: 21 NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
L + +++SGL++ +++ ++ ++ + L D +
Sbjct: 20 QSKLMDMNTKIASGLKIQYGYQDSSVFNQNLKLEYEKINLDQGIDVGNDAYTSTLNTDKA 79
Query: 81 MSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+S+ K+ T ++I ++ +L+ + +IA S + ++
Sbjct: 80 LSELSQTAEQFNTKLIQAANDIHSPTSREAIARDLEKLKEHMINIANTSIGGEFLFAGSN 139
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ + G+ + I Y + E + +D + R
Sbjct: 140 VKIRPFDPDGTYKGNNETLEALVSNNNPIPYNITGEELFFGRDSDHHKSITTNIRKFNQT 199
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ D L G + + + + + +
Sbjct: 200 KLNNDIMDRIKRGDIPEEVYIKVGDTLRDLLGDNDDDTSNNGKEYFYLRGVRPDGTSFKS 259
Query: 258 APNTTSGTSGSKSPS 272
+ G K+ +
Sbjct: 260 KFDFDVGYKNVKNAT 274
>gi|332162894|ref|YP_004299471.1| hypothetical protein YE105_C3274 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325667124|gb|ADZ43768.1| hypothetical protein YE105_C3274 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 305
Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/179 (8%), Positives = 52/179 (29%), Gaps = 1/179 (0%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M T + + + + ++++SG RV+ +D+ +++ +
Sbjct: 1 MRVTNT-SMSRIMMDSMANRTVEYAKLNEQLTSGKRVNKISDDPVASMQLVQLENSKSDV 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
+ + S + +A + + +++K+ A + + ++ L
Sbjct: 60 NQYKTNVVRLSGNYSVQEASLKSLEGQLLVVRDKLLAAKNGNHSATESATFGREINLLLD 119
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+ + G+ T + + T+ ++
Sbjct: 120 GMMSDLNTKNSEGNYLFAGTKTNIEPVEYNKTTQTYTFKGNNERRDAVVGNGITLQENT 178
>gi|206970882|ref|ZP_03231834.1| putative flagellar hook-associated protein FlgL [Bacillus cereus
AH1134]
gi|229078921|ref|ZP_04211473.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock4-2]
gi|229178148|ref|ZP_04305519.1| Flagellar hook-associated protein 3 [Bacillus cereus 172560W]
gi|206734518|gb|EDZ51688.1| putative flagellar hook-associated protein FlgL [Bacillus cereus
AH1134]
gi|228605278|gb|EEK62728.1| Flagellar hook-associated protein 3 [Bacillus cereus 172560W]
gi|228704335|gb|EEL56769.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock4-2]
Length = 287
Score = 52.4 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 54/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + ++ + + + E+ + +++ I
Sbjct: 63 QKDLADSKNVLTQTENTLQGIFKSLTRADQLTVQALNEP----NGEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S KS G+ +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEKSPFTEDGTYQGGQNDVNWQLNDGY 166
>gi|171322358|ref|ZP_02911182.1| flagellar hook-associated protein 3 [Burkholderia ambifaria MEX-5]
gi|171092320|gb|EDT37689.1| flagellar hook-associated protein 3 [Burkholderia ambifaria MEX-5]
Length = 413
Score = 52.4 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/197 (12%), Positives = 58/197 (29%), Gaps = 3/197 (1%)
Query: 31 VSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMST 90
++SG+ + ADN + A + + LS + + + + V++
Sbjct: 30 IASGVSLQTPADNPVGAAQAVQLSMTSATLSQYATNQTAALASLQAEDQALQSVSGVLTG 89
Query: 91 IKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
++ + + D ++ +++ + QL +A + G SS +
Sbjct: 90 VQTLVVRAGDGSLADGDRSALATQLQGYRDQLMTLANSNDGAGNYLFAGLNNSSAPFTSS 149
Query: 148 SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
D+G Q+ D + + G
Sbjct: 150 PNGSVSYVGDSGTRQVQIGDSSSVAQGDTGSAVFMSVASLGSAPVPSAGAANTGTGTITA 209
Query: 208 VSVYDASGTISTKKFKL 224
V+V S + F +
Sbjct: 210 VTVTSPSAATNGHHFSI 226
>gi|322832571|ref|YP_004212598.1| flagellar hook-associated protein 3 [Rahnella sp. Y9602]
gi|321167772|gb|ADW73471.1| flagellar hook-associated protein 3 [Rahnella sp. Y9602]
Length = 320
Score = 52.4 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/227 (11%), Positives = 63/227 (27%), Gaps = 4/227 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN + D + ++S+G +VS +D+ S A +++ S
Sbjct: 3 LSTNMIYNQNMNAVLDGQNRFQATGLQLSTGSKVSKPSDDPLAASQAVLVRQAQSENSQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
S A + + ++ +S + + I + D S+ +++ L+SQL
Sbjct: 63 SVARTFANQSMSQEESILSSVTSTIQDAQTLIVQAGDGSLSDDDRSSLATKLDSLKSQLV 122
Query: 121 DIARGSSFNGENWLRTD-LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++A + NG + + + + +
Sbjct: 123 NLANSTDGNGRFIFAGYKSDTPPYTQDATTGAVTYSGGTTSITQQVDTSRTMTINHTGNQ 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + + + + T
Sbjct: 183 IFNALTGDAKAEPDGSPSESDLFKTIDGALTALRTPSADNTTDTQYT 229
Score = 37.0 bits (83), Expect = 5.9, Method: Composition-based stats.
Identities = 17/165 (10%), Positives = 46/165 (27%)
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
KS + + + + + + T + D ++ S
Sbjct: 139 YKSDTPPYTQDATTGAVTYSGGTTSITQQVDTSRTMTINHTGNQIFNALTGDAKAEPDGS 198
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
+ ++ L NT A+++ + + + ++G+ S
Sbjct: 199 PSESDLFKTIDGALTALRTPSADNTTDTQYTDAIDKANRGLSNSLNNVLSVRSELGTQMS 258
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ + + + LVD + S + + Q Q +
Sbjct: 259 ELDNLDTLGDNRDVSNSTKLSNLVDTEWTSAISTYTLQQVALQAS 303
>gi|211909254|gb|ACJ12900.1| flagellin protein [Borrelia garinii]
gi|211909256|gb|ACJ12901.1| flagellin protein [Borrelia garinii]
gi|211909258|gb|ACJ12902.1| flagellin protein [Borrelia garinii]
gi|211909260|gb|ACJ12903.1| flagellin protein [Borrelia garinii]
gi|211909262|gb|ACJ12904.1| flagellin protein [Borrelia garinii]
Length = 97
Score = 52.4 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 3/89 (3%)
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQ 118
S + + + +++ V+ +K D SIQ EI QL +
Sbjct: 1 QASRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDE 60
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAK 147
+ IA + +N + L S A+
Sbjct: 61 INRIADQAQYNQMHMLSNKSASQNVRTAE 89
>gi|196033600|ref|ZP_03101012.1| putative flagellar hook-associated protein FlgL [Bacillus cereus W]
gi|195994034|gb|EDX57990.1| putative flagellar hook-associated protein FlgL [Bacillus cereus W]
Length = 287
Score = 52.4 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 53/168 (31%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + ++ + + + E+ + ++ I
Sbjct: 63 QKDIADSKNVLIQTENTLQSVLKSLTRADQLTVQALNGT----NSEKELQAMGVEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G+ +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEKLPFTEDGTYQGGQNDVNWQLNDGY 166
>gi|229043493|ref|ZP_04191203.1| Flagellar hook-associated protein 3 [Bacillus cereus AH676]
gi|228725871|gb|EEL77118.1| Flagellar hook-associated protein 3 [Bacillus cereus AH676]
Length = 287
Score = 52.4 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/168 (10%), Positives = 52/168 (30%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + ++ + + + E+ + +L I
Sbjct: 63 QKDIADSKNVLTQTENTLQGVLKSLTRADQLTVQALNGT----NSEKELQAIGVELDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S GK +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAENLPFTEDGTYQGGKNDVNWKLNDGY 166
>gi|253698743|ref|YP_003019932.1| flagellin domain protein [Geobacter sp. M21]
gi|251773593|gb|ACT16174.1| flagellin domain protein [Geobacter sp. M21]
Length = 272
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/264 (14%), Positives = 82/264 (31%)
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+ N L + + +++ A A+ +
Sbjct: 9 TAGMRTNLLNLQNTSQLLNRTQMRLSSGKQVNSALDNPTNYFAAQNANQRASDLADRKDG 68
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
+ A T+ T + A + AT ++I S +S
Sbjct: 69 MSEGVQTVSAANAGITAITGLINAAKGIAQSALSTSDTLTRSKLATQYDTIRSQIDNISS 128
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
G + T + G+ + ++ + A+ + +
Sbjct: 129 DSGYRGLNLLSTNNTLTVNFNENASSSLNVVGFLATSSGLSMSGASGAWEAASNITTDTA 188
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+DT I + + + + I +++F M + ++ G L ADM E + LQ
Sbjct: 189 KMDTAISTLRSNTQTLAANLNIITTRQNFTDEMINTLQTGADNLTLADMNQEGANMLMLQ 248
Query: 427 TQQQLAVQALSIVNNSTARILSLF 450
T+Q L +LS+ + + +L LF
Sbjct: 249 TRQSLGTTSLSMSSQAAQSVLKLF 272
Score = 50.9 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 75/228 (32%), Gaps = 2/228 (0%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I + L++ + L Q R+SSG +V+ A DN + AQ L+
Sbjct: 4 SDISLTAGMRTNLLNLQNTSQLLNRTQMRLSSGKQVNSALDNPTNYFAAQNANQRASDLA 63
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQL 119
D + G V A AG++ +++ K + + ++ ++SQ+
Sbjct: 64 DRKDGMSEGVQTVSAANAGITAITGLINAAKGIAQSALSTSDTLTRSKLATQYDTIRSQI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+I+ S + G N L T+ + + + ++ +
Sbjct: 124 DNISSDSGYRGLNLLSTNNTLTVNFNENASSSLNVVGFLATSSGLSMSGASGAWEAASNI 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+TD + + +I + + + + A
Sbjct: 184 TTDTAKMDTAISTLRSNTQTLAANLNIITTRQNFTDEMINTLQTGADN 231
>gi|313682312|ref|YP_004060050.1| flagellar hook-associated protein flgl [Sulfuricurvum kujiense DSM
16994]
gi|313155172|gb|ADR33850.1| flagellar hook-associated protein FlgL [Sulfuricurvum kujiense DSM
16994]
Length = 703
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/319 (9%), Positives = 76/319 (23%), Gaps = 3/319 (0%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
IN L V ++SSG ++ A ++ + + + + L V ++
Sbjct: 17 NKINKQLFDVNKQISSGQKIQYAHEDPSIFINTIRLDDELTTLGQVKNSAQNAYKFSTQT 76
Query: 78 KAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + + ++K K + + +I ++ LQ+ L +A S +
Sbjct: 77 DTTIGDIVKTLESMKVKLLNAASDTQSDASRNAIAQDLRGLQNHLLTLANTSIGGQFIFS 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
T L + G+ + Y + + + +
Sbjct: 137 GTALSVKPIDENGNYKGNDKTLEAFLGAGLKQPYNISGAQLFFGDESIINRKITTNVPQT 196
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ + S + K I
Sbjct: 197 SLTDLYPNIMQGSQIPDSFSKETYITSSSTIRDLMGDTNSDATDDPLRKAYFYIQGTRST 256
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
+ + + + + N T D +S +
Sbjct: 257 GETFKQKITLGTDATMEDLTREISDAFAPNQVDVTINTRGQIEIKDKIAGSSKLDFHMIG 316
Query: 315 HYYVDTESTTLDSRKDLPK 333
+ ++ DL
Sbjct: 317 AMDLGSDGIDSADTPDLST 335
>gi|317133462|ref|YP_004092776.1| hypothetical protein Ethha_2552 [Ethanoligenens harbinense YUAN-3]
gi|315471441|gb|ADU28045.1| hypothetical protein Ethha_2552 [Ethanoligenens harbinense YUAN-3]
Length = 436
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/435 (11%), Positives = 119/435 (27%), Gaps = 17/435 (3%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+L + ++SSG S A+ + + + I + +
Sbjct: 14 NQLNQNVERVSDDTQKLSSGQMYSRASQDPVDAAEMIAANGQLNTIERYQKNITNTQAWL 73
Query: 75 DIAKAGMSKA-IDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
++ ++K ++ + + A GTDS S + +
Sbjct: 74 TDTESTVNKTYYSILQSANTTLNAAANSGTDSSVNNSTLATNLQ-------YDQTEILSA 126
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
L + + S G+ + T Y+ + +++ +GT ++
Sbjct: 127 LNSTSSTGQYVFGGSASGNPPFKAGSESDYTAYSNYVTAYKNVYETAYNGTTGTAADKQS 186
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
D ++ AS ++ T G+ +A ++ + P
Sbjct: 187 AAEAAITADSADGSTALGAASSALTVAPVVDVTIDGSGNATVSAALSESDIEGKLLYQTP 246
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+++ S + + R+ + ++ VA
Sbjct: 247 GTGKYIPVAKINDSAQTSSTTVNDLAYYSTENSAMTRSYPVDLGYGTQMDSSGNVAAGTA 306
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
D S L + + T + +T + + +
Sbjct: 307 FEASTDPLSFLLQNVTASGSQNVYDNFGATATALNNDDTSTVSASQTLNT------QSMD 360
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A+ +G+ + + + + + + D D + T+ S Q
Sbjct: 361 AASLTNAVLGAKQNMLTFLSNKYSADNTNATQRLSNVEDVDTTTAYTQYSLHLMAYQA-- 418
Query: 434 QALSIVNNSTARILS 448
L+I N+ L+
Sbjct: 419 -TLAISNSILQNNLT 432
>gi|307691112|ref|ZP_07633558.1| flagellin domain-containing protein [Clostridium cellulovorans
743B]
Length = 43
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 17/43 (39%)
Query: 383 GSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
G+ +R+ + + ++ R+ D DMA E +
Sbjct: 1 GANQNRLEHTIANLDNASENLQAAESRVRDVDMAKEMMSFTKN 43
>gi|322421647|ref|YP_004200870.1| flagellin domain-containing protein [Geobacter sp. M18]
gi|320128034|gb|ADW15594.1| flagellin domain protein [Geobacter sp. M18]
Length = 272
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 50/137 (36%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
T + G+ + ++ A T + + + +DT I
Sbjct: 136 NLLSSTNTLTVTFNENASSAMNVVGFLANSTGLSLSAATGNWQTTSNITTDTAKMDTAIS 195
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ + + I +++F M ++ G L ADM E + LQT+Q L
Sbjct: 196 TLRTNTQTLAANLNIITNRQNFTDEMISTLQTGADNLTLADMNQEGANMLMLQTRQSLGT 255
Query: 434 QALSIVNNSTARILSLF 450
+LS+ + + +L LF
Sbjct: 256 TSLSMSSQAAQAVLRLF 272
Score = 49.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 2/225 (0%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+ I + L+ + L Q+R+SSG +V+ A DN + AQ G L+
Sbjct: 4 SDISLTAGMRTNLLNLQTTSTLLNRTQERLSSGKKVNSALDNPTNYFAAQNANQRAGDLA 63
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQL 119
D + V A AG+S +++ K + + + +++Q+
Sbjct: 64 DRKDGMSEAVQTVSAANAGISAITGLINAAKGIAQSAMSTSDTGVQSKLAVQYNTIRTQI 123
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
+++ S + G N L + + + + ++ +
Sbjct: 124 DNLSSDSGYRGLNLLSSTNTLTVTFNENASSAMNVVGFLANSTGLSLSAATGNWQTTSNI 183
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKL 224
+TD + + +I + + + + +
Sbjct: 184 TTDTAKMDTAISTLRTNTQTLAANLNIITNRQNFTDEMISTLQTG 228
>gi|291617027|ref|YP_003519769.1| FlgL [Pantoea ananatis LMG 20103]
gi|291152057|gb|ADD76641.1| FlgL [Pantoea ananatis LMG 20103]
gi|327393478|dbj|BAK10900.1| flagellar hook-associated protein 3 [Pantoea ananatis AJ13355]
Length = 320
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/203 (14%), Positives = 62/203 (30%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN + + D + ++S+GLRVS+ +D+ S A ++ S
Sbjct: 3 LSTNMIFDQQVRGVSDAQSSWLNAGKQLSTGLRVSNPSDDPIAASRAVVLSQTQAQASQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
S A + + + ++ + + + ++ I A S TQL+ +
Sbjct: 63 SVARTFADQGLSLEENTLNGVTNSIMSAQSMIVAAANGSLSDDDRASYATQLEGVRAQLL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ N G T S + G IT T+ ++
Sbjct: 123 NQVNSKDANGRYIFAGYKTDSPPFVDGAGGVTYQGGTDAITQKVDTDRTMTIGHTGNSIV 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDI 206
+ L ++
Sbjct: 183 MSITSNAVKEPNGGTSETNLFNM 205
Score = 38.2 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 33/312 (10%), Positives = 70/312 (22%), Gaps = 10/312 (3%)
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++ F+ + +D SS + K + + I + +T S
Sbjct: 2 RLSTNMIFDQQVRGVSDAQSSWLNAGKQLSTGLRVSNPSDDPIAASRAVVLSQTQAQASQ 61
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ + + V I + + S A
Sbjct: 62 YSVARTFADQGLSLEENTLNGVTNSIMSAQSMIVAAANGSLSDDDRASYATQLEGVRAQL 121
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
+ + + T D T ++ S
Sbjct: 122 LNQVNSKDANGRYIFAGYKTDSPPFVDGAGGVTYQGGTDAITQKVDTDRTMTIGHTGNSI 181
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
S K N LDS S + + + A
Sbjct: 182 VMSITSNAVKEPNGGTSETNLFNMLDS----------AISALKVPQNGADDATKATFSAA 231
Query: 361 MEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
M++ + + + +IG+ + + + + LVD D +
Sbjct: 232 MDKTSRGLSNSLNNVLSVRSEIGTQLKELDTLNAQGDDRKVIYDSQMSSLVDVDYTQAIS 291
Query: 421 RLSALQTQQQLA 432
+ Q Q +
Sbjct: 292 SYTMQQQALQAS 303
>gi|197734639|gb|ACH73215.1| FlaB [Borrelia garinii]
Length = 235
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/175 (8%), Positives = 46/175 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 61 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 120
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 121 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 180
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
++ I+ I+ + +G+ +R+ +D + + ++ ++ DA M E
Sbjct: 181 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENLKASYAQIKDATMTDE 235
Score = 45.9 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGS 126
+ + + +++ V+ +K D SIQ EI QL ++ IA +
Sbjct: 1 AINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQA 60
Query: 127 SFNGENWLRTDLGSSTASIAK 147
+N + L S A+
Sbjct: 61 QYNQMHMLSNKSASQNVRTAE 81
>gi|83859395|ref|ZP_00952916.1| flagellin, putative [Oceanicaulis alexandrii HTCC2633]
gi|83852842|gb|EAP90695.1| flagellin, putative [Oceanicaulis alexandrii HTCC2633]
Length = 303
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 52/163 (31%)
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
I +++ +D +T + +L I+
Sbjct: 136 PFTADTIADLQAAVPDVSATFQNAADRQTTKIEETITIDVNATASEVGTELMASIERIAD 195
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
N++ +E ++ I + A + G+ ++ +
Sbjct: 196 FNAGPDGPFDGQITENQQAFLETELANIISAFDTINVAMAENGARQKQLEGSITGHEKRS 255
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNST 443
D +E V + DADMA +TR QT Q++ Q S ++ +
Sbjct: 256 DYLEIMVAGIEDADMAEAATRFQQAQTAVQVSAQTFSRLSQIS 298
>gi|294013093|ref|YP_003546553.1| flagellar hook-associated protein 3 FlgL [Sphingobium japonicum
UT26S]
gi|292676423|dbj|BAI97941.1| flagellar hook-associated protein 3 FlgL [Sphingobium japonicum
UT26S]
Length = 281
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 57/142 (40%), Gaps = 4/142 (2%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M I TN ++ ++ + ++ + Q +S+G ++ ++NA W +
Sbjct: 1 MVGI-TNKILLAEIRRQQQLSQGIVDGQTAISTGKTLTRPSENALAWVQVSDIGRAQAQQ 59
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQS---EITQLQS 117
+A + G+++ A+A + + +++ + +TA + S + E+ +++
Sbjct: 60 AAWQSNVSTGTARAATAEANLQEMNTLLTRAQELLTAARNGALNDASKTAIVEEMKTIRT 119
Query: 118 QLRDIARGSSFNGENWLRTDLG 139
+ + +NG
Sbjct: 120 TIDSLLNQKDYNGVPTFDDGQS 141
Score = 41.3 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 31/88 (35%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
+ + + + K G S+R+ + + + +++ L D+
Sbjct: 188 SVDADVVAALDAVKAAQNHVVLEQTKQGVRSNRLDVIGTRLTDIDIDLKERRADLESTDL 247
Query: 416 ASESTRLSALQTQQQLAVQALSIVNNST 443
+ +SA Q + A A + +N T
Sbjct: 248 TEVISSVSAKLLQLEAAQSAFARINQQT 275
>gi|22086293|gb|AAM90627.1|AF398973_1 FliC [Clostridium difficile]
Length = 145
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/136 (13%), Positives = 41/136 (30%), Gaps = 3/136 (2%)
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLRDIARGSS 127
S V A+ + + +++ ++ + + I E+TQL+ ++ I+ +
Sbjct: 1 ISVVQTAEGSLEETGNILQRMRTLSLQSANEINNTEEREKIADELTQLKDEIERISSSTE 60
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
FNG+ L + + S + N +I +T
Sbjct: 61 FNGKKLLDGTSSTIRLQVGASYGTNVSGTSNNNNEIKIQLVNTASIMASAGITTASIGSM 120
Query: 188 GLLDRNHKIKVEPQVL 203
+ V
Sbjct: 121 KAGGTTGTDAAKTMVS 136
>gi|168699686|ref|ZP_02731963.1| flagellar hook-associated protein FlgL [Gemmata obscuriglobus UQM
2246]
Length = 311
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/194 (11%), Positives = 62/194 (31%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+A +R + +L D+VSSG+R+ A+D+ + + K+ + L + + + +
Sbjct: 13 NAIANIRLRSADLAKFYDQVSSGVRIEKASDDPSKYPALTEAKAASNRLKSYAGTVSEST 72
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
+ ++ + + D++ KN + T +S ++ +++ S + + +
Sbjct: 73 AVLNSGVSTLQDVNDILVRAKNIALEANDASTQPESREALASEVDSLISRALITVNSRPD 132
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
+ + + V T
Sbjct: 133 GSSLFSGTALDTNAFRVATTDAQGRPATVVYDGADQRARVVTGRGTTVDTRYVGSEVFQQ 192
Query: 192 RNHKIKVEPQVLKD 205
+ L+D
Sbjct: 193 PGADVFASLIALRD 206
>gi|17548573|ref|NP_521913.1| flagellar hook-associated protein 3 [Ralstonia solanacearum
GMI1000]
gi|17430821|emb|CAD17503.1| probable flagellar hook-associated protein 3 [Ralstonia
solanacearum GMI1000]
Length = 316
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/254 (9%), Positives = 71/254 (27%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +++ ++ NL +Q ++S+G+ ++ A DN A ++
Sbjct: 3 VSTAQFFSASTSSMQTTQSNLVKLQQQISTGIALNAAGDNPAAMGQVLQLQQSQDTNDQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+++++ + +S I + K A + Q++ Q + +
Sbjct: 63 QVNRDATNARLNTVSSALSDVIATLQQGKQSTIAANTTLLTDSQRVGILAQVKQQYQQLL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ + + G++ + G ++ T + +
Sbjct: 123 STANQRDASGVALFAGANGTTAPFVSSGGSVQYVGSGQPPTVQVAQDISMPNSVSGDSVF 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
N + ++ T S + T ++ + A
Sbjct: 183 VRVPNSDVSNPNANQSVFKTYENLITALSKPITTSADVTAIQTAVQTAQGNLDSAYQVAL 242
Query: 244 GIATIPVPLPAAPA 257
A
Sbjct: 243 QAQVTVGTQQAQIT 256
Score = 37.8 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 30/300 (10%), Positives = 85/300 (28%)
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ S + S + + + Q + L+ + + D N + +
Sbjct: 4 STAQFFSASTSSMQTTQSNLVKLQQQISTGIALNAAGDNPAAMGQVLQLQQSQDTNDQFQ 63
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
V +V A + + ++ A + +A + +
Sbjct: 64 VNRDATNARLNTVSSALSDVIATLQQGKQSTIAANTTLLTDSQRVGILAQVKQQYQQLLS 123
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
N + + + + + + + + G++ +
Sbjct: 124 TANQRDASGVALFAGANGTTAPFVSSGGSVQYVGSGQPPTVQVAQDISMPNSVSGDSVFV 183
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
S + + + L+ + D + A++ +D+ + A
Sbjct: 184 RVPNSDVSNPNANQSVFKTYENLITALSKPITTSADVTAIQTAVQTAQGNLDSAYQVALQ 243
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
A +G+ ++I + +++ + +L D S ++ S Q Q A + S
Sbjct: 244 AQVTVGTQQAQITTLNSSGSNFGEQLKEQISKLQSVDYTSAISQFSQQQVSLQAAQKTFS 303
>gi|50120646|ref|YP_049813.1| flagellar hook-associated protein FlgL [Pectobacterium atrosepticum
SCRI1043]
gi|49611172|emb|CAG74618.1| flagellar hook-associated protein 3 [Pectobacterium atrosepticum
SCRI1043]
Length = 317
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 57/143 (39%), Gaps = 5/143 (3%)
Query: 8 HSAMSASQKLRDI---NYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
++M Q ++ I + +++S+G RV + +D+ + ++ S +
Sbjct: 4 STSMMYQQNMQGIINGQATWQKTGEQLSTGKRVVNPSDDPIAAAGVVMLGQAQSENSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE--RGTDSKSIQSEITQLQSQLRDI 122
A + + ++ + K+ +S+ ++ G D KS+ + + ++++L ++
Sbjct: 64 LARTFAKQSMTLEESILGKSTTTVSSALTEVIKGGGVLNDDDRKSVATSLRGMKAELLNM 123
Query: 123 ARGSSFNGENWLRTDLGSSTASI 145
A + NG +
Sbjct: 124 ANSTDGNGNYIFSGYETDKAPFV 146
Score = 38.2 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 5/92 (5%)
Query: 360 AMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
A+E ++ +A ++G + + + K A + + +L D D
Sbjct: 229 ALETANRGLNNSFNNISAVRAELGIQLNEVDNLDAVGKDRDVANKTTLSQLQDTDWYEAI 288
Query: 420 TRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ QQ ++QA + +SLF+
Sbjct: 289 SSY----IMQQSSLQASYTSFQNMQG-MSLFQ 315
>gi|172061964|ref|YP_001809616.1| flagellar hook-associated protein FlgL [Burkholderia ambifaria
MC40-6]
gi|171994481|gb|ACB65400.1| flagellar hook-associated protein 3 [Burkholderia ambifaria MC40-6]
Length = 413
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 57/197 (28%), Gaps = 3/197 (1%)
Query: 31 VSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMST 90
++SG+ + ADN + A + + LS + + + + V++
Sbjct: 30 IASGVSLQTPADNPVGAAQAVQLSMTSATLSQYATNQTAALASLQAEDQALQSVSGVLTG 89
Query: 91 IKNKITAGVERGTDSKSIQSEITQLQ---SQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
++ + + + TQLQ QL +A + G SS +
Sbjct: 90 VQTLVVRAGDGSLADSDRSALATQLQGYRDQLMTLANSNDGAGNYLFAGLNNSSAPFTSS 149
Query: 148 SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
D+G Q+ D + + G
Sbjct: 150 PNGSVSYVGDSGTRQVQIGDSSSVAQGDTGSAVFMSVPSLGSAPVPSAGAANTGTGTITA 209
Query: 208 VSVYDASGTISTKKFKL 224
V+V S + +F +
Sbjct: 210 VTVTTPSAATNGHQFSI 226
>gi|4760501|dbj|BAA77311.1| flagellin [Pseudomonas putida]
Length = 136
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 6/57 (10%), Positives = 23/57 (40%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ + ++ + +D ++ + +G++ +R + + + R+ DA
Sbjct: 80 DSASAQQAIQALDGAMQQVDSQRASLGAVQNRFDSTVSNLNSISENSTAARSRVQDA 136
>gi|16125151|ref|NP_419715.1| flagellin [Caulobacter crescentus CB15]
gi|221233879|ref|YP_002516315.1| flagellar hook-associated protein FlgL [Caulobacter crescentus
NA1000]
gi|13422163|gb|AAK22883.1| flagellin, putative [Caulobacter crescentus CB15]
gi|220963051|gb|ACL94407.1| flagellar hook-associated protein FlgL [Caulobacter crescentus
NA1000]
Length = 307
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 39/136 (28%)
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ + D+ + + +
Sbjct: 160 FQNDQYITTNRVDEQTNAKTGVLGDALGTATFDAFKQVQAYIDANGPFTGNLNDTQVNFL 219
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ M+S D+ K GK G R E + D + VG +VD DMA TR
Sbjct: 220 KGMLSTFDSAYKSVVDIQGKNGVNQKRFEAAEIDLSNQADTLTTMVGGIVDVDMAEAITR 279
Query: 422 LSALQTQQQLAVQALS 437
L A + Q + Q S
Sbjct: 280 LEAAKLAVQASAQVFS 295
>gi|46934826|emb|CAF74790.1| flagellin gene flaB [Magnetospirillum gryphiswaldense MSR-1]
Length = 283
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 70/180 (38%), Gaps = 2/180 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I SA + + + +S+G +VS D+A ++ A+ + LSAV
Sbjct: 18 INLTASARDVLVTQQSLAASAAQRSQNLSTGKKVSRVTDDAVAFAAARALTERASDLSAV 77
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQLRD 121
D++G G S ++ A AG ++ +K TA + ++ ++ QL+ Q+
Sbjct: 78 KDSVGQGVSTINAALAGAEGVNSLLDQMKGIATAAIASGDSAERSALATQYNQLRGQVDS 137
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+A + +NG N L + + V S + + + ++T
Sbjct: 138 LAADAGYNGVNLLSASSSALNVAFGTQVGDSLTVNGQNVSSAGLGVTAVAADGSDFSAAT 197
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 40/88 (45%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
++ +D+ A +GS + + ++ + + G RL +AD+ E+ L
Sbjct: 196 ATLAQLDSAGATVNAVQSSLGSNLTALGIRGEAAASQAVIAQAGASRLTEADLNEEAAML 255
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLF 450
A QT+QQLA + + +L+LF
Sbjct: 256 VATQTRQQLARAGQGVSQRAQESLLTLF 283
>gi|255030456|ref|ZP_05302407.1| flagellar hook-associated protein FlgL [Listeria monocytogenes
LO28]
Length = 274
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/203 (11%), Positives = 59/203 (29%), Gaps = 3/203 (1%)
Query: 19 DINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAK 78
+++ NL Q +VSSG + ++N + L+ + S ++ A+
Sbjct: 1 NVSGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQLNREKTDVTEAKSLLNTAE 60
Query: 79 AGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLRDIARGSSFNGENWLR 135
+S M+ + + + +D ++ EI L L +A +
Sbjct: 61 TSLSSMSTSMNRVNALVLQAINGTSDKDNMSQSAEEIKGLLDVLISVANSEDDGRYVFSG 120
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ + K+ + D + TD + K
Sbjct: 121 SSTSVKPFTTDKTTGEIIYNGTTENKKFRVTDTLEVEVFHDGSAMTDVFNNIQKIVDAMK 180
Query: 196 IKVEPQVLKDIDVSVYDASGTIS 218
+ + + + + +
Sbjct: 181 TGDKDALSALQETNSKNIEIITN 203
Score = 36.6 bits (82), Expect = 8.9, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 24/64 (37%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
I+ T + IG + + ++ + + + + +M + L+ Q
Sbjct: 198 IEIITNSMTNIGGQKNGVTAYDNVLSSKIVDFSERKSNVEEVNMPEAVSNLNKTSIAYQA 257
Query: 432 AVQA 435
A+Q+
Sbjct: 258 ALQS 261
>gi|229132552|ref|ZP_04261401.1| Flagellar hook-associated protein 3 [Bacillus cereus BDRD-ST196]
gi|228650898|gb|EEL06884.1| Flagellar hook-associated protein 3 [Bacillus cereus BDRD-ST196]
Length = 287
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/168 (8%), Positives = 54/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A ++ D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQMMDLNVQQQYHRNQVTSGKKNLFMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + ++ + + + E+ + +++ I
Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLTVQALNGT----NSEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S ++ GK +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEQAPFTEDGTYQGGKNDVNWQLNDGY 166
>gi|37909472|gb|AAP51734.1| lateral flagellin [Aeromonas jandaei]
Length = 183
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/169 (9%), Positives = 52/169 (30%), Gaps = 3/169 (1%)
Query: 54 KSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG---VERGTDSKSIQS 110
++ + S + A+ M + ++ +K+ T D ++ S
Sbjct: 1 QAQSNGQKVGMRNAQDAVSMIQTAEGAMDEMTNITQRMKDLATQAANGTNSDKDIAAMNS 60
Query: 111 EITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYL 170
E +L +L +I ++F G + L+ +++ + S +
Sbjct: 61 EFKELGKELINIRDNTTFGGTDLLKAGGKFENGAVSFQIGASATEKLDLNASTQVKAVNT 120
Query: 171 DPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIST 219
+ + + + + ++ + ++ T++
Sbjct: 121 AITSAAGVTLSATNATAQITAMDSMLEKIGEARSTFGANINRLDHTVNN 169
Score = 42.8 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 7/53 (13%), Positives = 21/53 (39%)
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
++ +D+ ++ A G+ +R+ + + M++ + GR
Sbjct: 131 SATNATAQITAMDSMLEKIGEARSTFGANINRLDHTVNNLSNMKENTDMANGR 183
>gi|2576263|emb|CAA75374.1| flagellin [Borrelia burgdorferi]
Length = 155
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 9/86 (10%), Positives = 28/86 (32%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 63 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 122
Query: 394 DFIKLMRDAVEKGVGRLVDADMASES 419
D + + ++ ++ DA M E
Sbjct: 123 DSTEYAIENLKASYAQIKDATMTDEV 148
>gi|32490796|ref|NP_871050.1| hypothetical protein WGLp047 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166002|dbj|BAC24193.1| flgL [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 313
Score = 52.1 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 53/151 (35%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ T + + + R+SSG R+ ++DN S + I + + L+
Sbjct: 2 NLSTRLLYNNYISNILYNTSQFHELTSRLSSGKRIMKSSDNPQCLSSSIINQKNISKLNR 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
+ + + + + +S I K+ + + D + SE+ L+++L +
Sbjct: 62 FNQTRNYIKNFLSKECNVLQNISNSLSIIGVKVISIQQSLGDPSVLISELKSLRNELIML 121
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
A + N + T K
Sbjct: 122 ANSTDLNNNYIFSGNHVDKTPFSEKENNEYQ 152
>gi|170703621|ref|ZP_02894362.1| flagellar hook-associated protein 3 [Burkholderia ambifaria
IOP40-10]
gi|170131467|gb|EDT00054.1| flagellar hook-associated protein 3 [Burkholderia ambifaria
IOP40-10]
Length = 413
Score = 51.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/245 (15%), Positives = 74/245 (30%), Gaps = 3/245 (1%)
Query: 31 VSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMST 90
++SG+ + ADN + A + + LS + + + + V+++
Sbjct: 30 IASGVSLQTPADNPVGAAQAVQLSMTSATLSQYATNQTAALASLQAEDQALQSVSGVLTS 89
Query: 91 IKNKITAGVERGTDSKSIQSEITQLQ---SQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
++ + + + TQLQ QL +A + G SS +
Sbjct: 90 VQTLVVRAGDGSLADSDRSALATQLQGYRDQLMTLANSNDGAGNYLFAGLNNSSAPFTSS 149
Query: 148 SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
D+G Q+ D + + G
Sbjct: 150 PNGSVSYVGDSGTRQVQIADSSSVAQGDTGSAVFMSVPSLGSAPVPSAGAANTGTGTITA 209
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
V+V S + +F +A A T + AK T P A A+ G +
Sbjct: 210 VTVTSPSAATNGHQFSIAFGGTAAAPTYTVTDNSAKPPTTTPAQAYTAGASIALGGGMTV 269
Query: 268 SKSPS 272
+ S +
Sbjct: 270 AVSGT 274
>gi|134147408|gb|ABO63958.1| FlaB [Borrelia sp. BR]
Length = 197
Score = 51.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 9/79 (11%), Positives = 27/79 (34%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
++ + ++ I+ I+ T +G+ +R+ + + ++ +
Sbjct: 119 SSPINVTTAIDANTSLTKIEDAIRMVTDQRANLGAFQNRLESVKASTDYAIENLKASYAQ 178
Query: 410 LVDADMASESTRLSALQTQ 428
+ DA M E +
Sbjct: 179 IKDAIMTDEIVASTTNSIL 197
>gi|322435944|ref|YP_004218156.1| flagellar hook-associated protein 3 [Acidobacterium sp. MP5ACTX9]
gi|321163671|gb|ADW69376.1| flagellar hook-associated protein 3 [Acidobacterium sp. MP5ACTX9]
Length = 300
Score = 51.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/216 (11%), Positives = 72/216 (33%), Gaps = 3/216 (1%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
Q + + + + +++SSGLRVS +D+ + ++ S + + + +
Sbjct: 13 QSVSASSAAEQKLTNQLSSGLRVSSLSDDPVAVAQNVLLASSISKADSFTQTSTREQAVL 72
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL---QSQLRDIARGSSFNGE 131
+ + + + +++ + +++S QL + Q+ +A
Sbjct: 73 QATDSALGEVVSNVTSAITLSVQANAGTLSASNLKSIGEQLSGIRDQVVSLANTGYLGTY 132
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLD 191
+ + G+ ++A S + + + V + + V L S L
Sbjct: 133 LFGGSQGGTPPFTLATSTDPATVTYNGDSVTQSVVTPDQQKIQVNLPGSAIFQASGADLL 192
Query: 192 RNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
V ++ + ++T + +
Sbjct: 193 GALNQVVSDVSNGASGTALASDTAALTTALGNVTSQ 228
Score = 39.0 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 27/66 (40%)
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ + T + T+ +GS SR+ + + L+ +D A+ +T L+
Sbjct: 216 AALTTALGNVTSQRAVLGSSLSRLTSTTTYSNTQEAQLTAQQSTLLSSDTAAVATGLTTA 275
Query: 426 QTQQQL 431
+TQ
Sbjct: 276 ETQHTA 281
>gi|218896671|ref|YP_002445082.1| putative flagellar hook-associated protein FlgL [Bacillus cereus
G9842]
gi|228900320|ref|ZP_04064550.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis IBL
4222]
gi|218542219|gb|ACK94613.1| putative flagellar hook-associated protein FlgL [Bacillus cereus
G9842]
gi|228859355|gb|EEN03785.1| Flagellar hook-associated protein 3 [Bacillus thuringiensis IBL
4222]
Length = 287
Score = 51.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 55/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANMEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
I + + + + + ++ + ++ + E+ + +++ I
Sbjct: 63 QKDIADSKNVLTQTENTLQGVLKSLTRTDQLMVQ----ALSEQNGEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G+ +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEKLPFTEDGTYQGGQNDVNWQLNDGY 166
>gi|2576271|emb|CAA75365.1| flagellin [Borrelia burgdorferi]
Length = 157
Score = 51.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 9/94 (9%), Positives = 29/94 (30%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 64 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 123
Query: 394 DFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
D + + ++ ++ DA M E +
Sbjct: 124 DSTEYAIENLKASYAQIKDATMTDEVVAATTNSI 157
>gi|188025868|ref|ZP_02960117.2| hypothetical protein PROSTU_02025 [Providencia stuartii ATCC 25827]
gi|188020804|gb|EDU58844.1| hypothetical protein PROSTU_02025 [Providencia stuartii ATCC 25827]
Length = 305
Score = 51.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/169 (11%), Positives = 50/169 (29%), Gaps = 4/169 (2%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
Q + + +++SG RVS +D+ S A + + G +
Sbjct: 7 LQDMNNAQARWMDAGSQLASGKRVSKPSDDPQASSQAVRVNQSENRNQQYVASRGFAKTG 66
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVE----RGTDSKSIQSEITQLQSQLRDIARGSSFN 129
+ + + +++ +V + I I +D S+ +++ L+ QL + + N
Sbjct: 67 MLLQMSVLTQMTEVTTQIDTTIIQASNQGSLSDSDRMSLAEQLSGLKDQLVALGNTTDGN 126
Query: 130 GENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
G + + + +
Sbjct: 127 GRYIFAGYKSDKPPFEVNAAGDVIYKGGDKAIMQNVSSDREMTTYFTGA 175
>gi|222823826|ref|YP_002575400.1| flagellin family protein [Campylobacter lari RM2100]
gi|222539048|gb|ACM64149.1| flagellin family protein [Campylobacter lari RM2100]
Length = 744
Score = 51.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/206 (10%), Positives = 60/206 (29%), Gaps = 3/206 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I ++ ++ Q D L ++ +G + + +NA + ++ + + V
Sbjct: 3 ISNQYNYYTSIQNYTDGQSLLNKYNLQLQTGQIIQHSFENANIYINGSRLEYELANIGQV 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLR 120
+ +++ K + T ++I E+ ++ +
Sbjct: 63 IQGTQSAMEMAKNTDTAIKNITELLEKFKTLLTKAASDGNSQTSREAIAKELKLIKDSIV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+IA S + ++ + + G+ T I Y + +
Sbjct: 123 NIANTSINGQYLFAGSNTATKPFDKFGNYTGNKDNIFVVSGAGTQIPYNVPGWDLFFKPD 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDI 206
T+ + + + D
Sbjct: 183 TNEHKLISTNVSMIDNRFDVNKNPDQ 208
Score = 44.0 bits (101), Expect = 0.048, Method: Composition-based stats.
Identities = 31/303 (10%), Positives = 68/303 (22%), Gaps = 3/303 (0%)
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLK 204
+ + + Y + + S G +
Sbjct: 441 ANANGDMTGQELQMSITSKSGQTYNVTIDLENSRVSYPDPNNPGQTISFPITHSQYNEAT 500
Query: 205 DIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSG 264
V + I+ + A AT + + + + G
Sbjct: 501 GTSVGMQTRPEDITYGQLNDIIGMFASDNVPTATINANQNGTINNNDFQTIQQNIDDSKG 560
Query: 265 TSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTT 324
+ + + + + + + N + + T
Sbjct: 561 FVEVNMDYKGRISITDKFSTNTNIGVSIKDGNSNTGFPTVGGQTVQGSNFVFSANNSLTI 620
Query: 325 LDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGS 384
D DL K++D V R + ++ + ID IG+
Sbjct: 621 DDPNVDLIKDLDEMIDAVLNGNMRADSEGKDPRNTGLQGALERIDHLQDHVRKMHTTIGA 680
Query: 385 ISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTA 444
++ I + + V + DAD + Q LS + +
Sbjct: 681 YTNNIEETNKRMTFLNVNVASIKSGVTDADYGQTYMQFMQTMVSYQA---MLSATSKISQ 737
Query: 445 RIL 447
L
Sbjct: 738 MSL 740
>gi|229058372|ref|ZP_04196756.1| Flagellar hook-associated protein 3 [Bacillus cereus AH603]
gi|228719881|gb|EEL71471.1| Flagellar hook-associated protein 3 [Bacillus cereus AH603]
Length = 287
Score = 51.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/169 (8%), Positives = 53/169 (31%), Gaps = 4/169 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A ++ D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQMMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + ++ + + + E+ + +++ I
Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLTVQALNGT----NSEKELKAIGAEIEQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
+ + + S + GK +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEQVPFTEDGTYQGGKNDVNWQLNDGYD 167
>gi|116805592|gb|ABK27781.1| flagellin [Treponema pedis]
gi|190610837|gb|ACE80259.1| FlaB2 [Treponema pedis]
gi|190610839|gb|ACE80260.1| FlaB2 [Treponema pedis]
Length = 170
Score = 51.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 45/135 (33%), Gaps = 3/135 (2%)
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARG 125
G + + +A+A + + D+M I+ D IQ E++QL +++ IA
Sbjct: 1 NGINFIQVAEAYLQETTDIMQRIRELAVQASNGIYSAEDRMQIQVEVSQLVAEVDRIASS 60
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+ FNG N L T + F N ++ + V +
Sbjct: 61 AQFNGMNMLTGRFARETGENVVTASMWFHIGANMDQRMRVYIGTMSAAAVGIREIGSEKI 120
Query: 186 RYGLLDRNHKIKVEP 200
+ + +
Sbjct: 121 MTIETADSANMSIGT 135
Score = 37.4 bits (84), Expect = 4.8, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 16/50 (32%)
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + ID +K +G+ +R+ L I + +
Sbjct: 121 MTIETADSANMSIGTIDEGLKKINKQRADLGAYQNRMELTVVGINIAAEN 170
>gi|294635620|ref|ZP_06714096.1| flagellar hook-associated protein 3 [Edwardsiella tarda ATCC 23685]
gi|291091003|gb|EFE23564.1| flagellar hook-associated protein 3 [Edwardsiella tarda ATCC 23685]
Length = 315
Score = 51.7 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/200 (11%), Positives = 58/200 (29%), Gaps = 7/200 (3%)
Query: 11 MSASQKLR---DINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q + D + + ++ SG RV +D+ S + A
Sbjct: 1 MIYQQNMNGVLDAQSEWQRIGAQMDSGKRVIVPSDDPLAASQLVGLNQAKSMNEQYGMAR 60
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITA----GVERGTDSKSIQSEITQLQSQLRDIA 123
G + ++ + + +VM + G + D +I +++ ++ QL ++A
Sbjct: 61 GYARQSTSMEESVLQQVTNVMQNATPVLVDGMSSGTKSDDDRAAIATQLESMRDQLINLA 120
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ NG + + G + + +
Sbjct: 121 NSTDGNGRYIFAGYKSDTAPFAKNATGGVAYSGGDKALTQQVDAARTMTVSHTGKQVFLS 180
Query: 184 TERYGLLDRNHKIKVEPQVL 203
+ + + ++ +
Sbjct: 181 ASSNPIKEPDGSVQNDIFAS 200
Score = 41.3 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 17/184 (9%), Positives = 50/184 (27%)
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
A N +G KS + + +A T+ + + T +V
Sbjct: 120 ANSTDGNGRYIFAGYKSDTAPFAKNATGGVAYSGGDKALTQQVDAARTMTVSHTGKQVFL 179
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + + D+ + + + + + + +
Sbjct: 180 SASSNPIKEPDGSVQNDIFASLQKAIDALKTPLAGADDATKQKVDDDLNSANRGLRNSLN 239
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ ++G+ + + + + + + D D +T + Q Q +
Sbjct: 240 NVSQVRAELGTQLNELDSLDAIGDENAITYKTRISNVQDVDWTQAATEYALRQVSLQASY 299
Query: 434 QALS 437
+ S
Sbjct: 300 KVFS 303
>gi|121586238|ref|ZP_01676028.1| flagellar hook-associated protein FlgL [Vibrio cholerae 2740-80]
gi|121549504|gb|EAX59530.1| flagellar hook-associated protein FlgL [Vibrio cholerae 2740-80]
Length = 208
Score = 51.7 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 48/135 (35%), Gaps = 5/135 (3%)
Query: 6 TNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N+ A+ +R + Q +++SG ++ A+DN Q + L D
Sbjct: 9 HNYQAV--QNDIRRQESKVFNNQAQLASGKKLLSASDNPLATHYIQNVGQQEEQLRQYLD 66
Query: 66 AIGLGSSKVDIAK---AGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
AI L ++++ + + + D ++ G D + + ++ + ++
Sbjct: 67 AIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQEMANNFINL 126
Query: 123 ARGSSFNGENWLRTD 137
A +G
Sbjct: 127 ANVQDESGNYIFAGT 141
>gi|78358058|ref|YP_389507.1| flagellin N-terminal domain-containing protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
gi|78220463|gb|ABB39812.1| flagellin N-terminal domain protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 282
Score = 51.7 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 36/91 (39%)
Query: 43 NAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG 102
+ A +++ ++SD+G L S + +S +A++ + ++ +
Sbjct: 53 DPAAQALSGKLRSDSGMLRQASANVSEAASVTAMAQSAAGTIRSSLERMQELAEGVADGS 112
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
+ Q+E L + +S+NG N
Sbjct: 113 LGVSAAQAEYQSLIDTIEGTVDSASYNGFNL 143
>gi|87042926|gb|ABD16471.1| FlaB [uncultured Borrelia sp.]
Length = 242
Score = 51.7 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 3/90 (3%)
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQS 117
S S + + + +++ V+ +K D SIQ EI QL
Sbjct: 1 SQASRNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTD 60
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAK 147
++ IA + +N + L + A+
Sbjct: 61 EINRIADQAQYNQMHMLSNKSAAQNVRTAE 90
Score = 49.7 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 15/172 (8%), Positives = 45/172 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + A T+ G + + A+ S N +
Sbjct: 70 QYNQMHMLSNKSAAQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 129
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ T T + + + +
Sbjct: 130 IYAANVANLFAGEGAQTAQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 189
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M
Sbjct: 190 SLAKIENAIRMVSDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATM 241
>gi|255321421|ref|ZP_05362581.1| flagellin [Campylobacter showae RM3277]
gi|255301574|gb|EET80831.1| flagellin [Campylobacter showae RM3277]
Length = 277
Score = 51.7 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 58/176 (32%), Gaps = 5/176 (2%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
+ ++ ++Q L N + +S+ +S ++A +IA ++S + L
Sbjct: 30 NFSANSSLSNQYLEQAQNNSAKALNNISAQRALS--GIDSANLAIADSLRSQSSTLEQGV 87
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRD 121
+ IA + ++ I K I+SE L +++
Sbjct: 88 ANANDAIGILQIADSTLANITQSADRIGELSVRYNGGILNSDQQKMIKSEADALVGAMKE 147
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+ +SFNG+N + T + + SV + V L
Sbjct: 148 STQQASFNGKNVFGGQMSFLTGNGSASVNLNAPDFSGIDVSNGESVSKFIGSVNAL 203
>gi|34334389|gb|AAQ64681.1| flagellin [Borrelia lonestari]
Length = 134
Score = 51.7 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 9/80 (11%), Positives = 27/80 (33%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
++ + ++ I+ I+ T +G+ +R+ + + ++
Sbjct: 55 QGGISSPINVTTAIDANASLTKIEDAIRMVTDQRANLGAFQNRLESVKASTDYAIENLKA 114
Query: 406 GVGRLVDADMASESTRLSAL 425
++ DA M E +
Sbjct: 115 SYAQIKDAIMTDEIVASTTN 134
>gi|320107050|ref|YP_004182640.1| flagellin domain-containing protein [Terriglobus saanensis SP1PR4]
gi|319925571|gb|ADV82646.1| flagellin domain protein [Terriglobus saanensis SP1PR4]
Length = 299
Score = 51.7 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/269 (10%), Positives = 74/269 (27%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
L ++ + + + +S+GLR++ D+ + + S + + + S+++
Sbjct: 14 SLNSLSASQQKISQEMSTGLRLTSLGDDPLAAGQNETLTSAISQMDSFVKTVSNVSNRMQ 73
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
A +S + + + TAG S ++S L S + ++ + +
Sbjct: 74 AADTALSSTVTALDNALSLATAGANSTLTSTQLKSLAESLTSIRDSVLSLANSSYQGNFL 133
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
+ ++ + T L S +
Sbjct: 134 FAGTAISSQPFTLDDSTTPATVTYSGDDATQTVTSTTGQQLATSVPGSQLFGTGTANDVF 193
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ + ++ T +++ + T
Sbjct: 194 AALNTLIADYQTGVAPTSATADLATLHDSLTNLSQQRSILDSSMSRLSAAGTYATNQETN 253
Query: 256 PAAPNTTSGTSGSKSPSVAASATYIRMGN 284
+T +S + S + SA +
Sbjct: 254 LQVAQSTLISSNTASLATQLSAVTTQQSA 282
>gi|56675434|emb|CAA75369.2| flagellin [Borrelia burgdorferi]
Length = 160
Score = 51.7 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/158 (7%), Positives = 40/158 (25%)
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + A+ S N + + + T
Sbjct: 1 TSKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVANLFSGEGAQTAQAAPVQEG 60
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRI 389
+ + + + ++ I+ I+ + +G+ +R+
Sbjct: 61 VQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRL 120
Query: 390 HLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
++ + + ++ ++ DA M E +
Sbjct: 121 ESIKNSTEYAIENLKASYAQIKDATMTDEVVAATTNSI 158
>gi|254993554|ref|ZP_05275744.1| flagellar hook-associated protein FlgL [Listeria monocytogenes FSL
J2-064]
Length = 107
Score = 51.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 42/105 (40%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN A S +L +++ NL Q +VSSG + ++N + L+
Sbjct: 3 ISTNQQANSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPGATAQILSYNHVLSQLNRE 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI 108
+ S ++ A+ +S M+ + + + +D ++
Sbjct: 63 KTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTSDKDNM 107
>gi|163939545|ref|YP_001644429.1| flagellar hook-associated protein FlgL [Bacillus weihenstephanensis
KBAB4]
gi|163861742|gb|ABY42801.1| flagellar hook-associated protein 3 [Bacillus weihenstephanensis
KBAB4]
Length = 287
Score = 51.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/169 (8%), Positives = 53/169 (31%), Gaps = 4/169 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A ++ D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNANWAKNQMMDLNVQQQYHRNQVTSGKKNLFMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + ++ + + + E+ + +++ I
Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLTLQALNGT----NSEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDP 172
+ + + S + GK +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEQVPFTEDGTYQGGKNDVNWQLNDGYD 167
>gi|318604260|emb|CBY25758.1| flagellar hook-associated protein FlgL [Yersinia enterocolitica
subsp. palearctica Y11]
Length = 293
Score = 51.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/164 (7%), Positives = 49/164 (29%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+ + + ++++SG RV+ +D+ +++ ++ + S
Sbjct: 3 SMANRTVEYAKLNEQLTSGKRVNKISDDPVASMQLVQLENSKSDVNQYKTNVVRLSGNYS 62
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+ +A + + +++K+ A + + ++ L + +
Sbjct: 63 VQEASLKSLEGQLLVVRDKLLAAKNGNHSATESATFGREINLLLDGMMSDLNTKNSEGNY 122
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
G+ T + + T+ ++
Sbjct: 123 LFAGTKTNIEPVEYNKTTQIYTFKGNNERRDAVVGNGITLQENT 166
>gi|300693345|ref|YP_003749318.1| flagellar hook-filament junction protein protein 3 [Ralstonia
solanacearum PSI07]
gi|299075382|emb|CBJ34677.1| flagellar hook-filament junction protein protein 3 [Ralstonia
solanacearum PSI07]
Length = 316
Score = 51.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/242 (9%), Positives = 66/242 (27%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+++ NL +Q ++S+G+ ++ A DN A ++ + +++
Sbjct: 15 SMQNTQSNLVKLQQQISTGIALNSAGDNPAAMGQVLQLQQSQDSNDQFQVNRDATDARLT 74
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+ +S I + K A + Q++ Q + + ++ + +
Sbjct: 75 NVSSALSDVITTLQQGKQSTIAANTTLLTDSQRVGILAQVKQQYQQLLSTANRRDASGVA 134
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
G++ + + ++ T + + N
Sbjct: 135 LFGGANGTTDPFTSTAGSVQYVGSGQPPTVQVAQNISMPNSVSGDSVFVRVPNSDASNPN 194
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ ++ T S + T ++ + A A
Sbjct: 195 ANQSVFKTYENLITALSKPITTSADVTTIQTAVQTAQGNLDSAYQVALQAQVTVGTQQAQ 254
Query: 256 PA 257
Sbjct: 255 IT 256
Score = 38.6 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 28/296 (9%), Positives = 83/296 (28%)
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ + + + + + Q + L+ + + D N + +
Sbjct: 4 STAQFFAASTVSMQNTQSNLVKLQQQISTGIALNSAGDNPAAMGQVLQLQQSQDSNDQFQ 63
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
V +V A + T + ++ A + +A + +
Sbjct: 64 VNRDATDARLTNVSSALSDVITTLQQGKQSTIAANTTLLTDSQRVGILAQVKQQYQQLLS 123
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
N + + + + + + + + G++ +
Sbjct: 124 TANRRDASGVALFGGANGTTDPFTSTAGSVQYVGSGQPPTVQVAQNISMPNSVSGDSVFV 183
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
S + + + L+ + D + A++ +D+ + A
Sbjct: 184 RVPNSDASNPNANQSVFKTYENLITALSKPITTSADVTTIQTAVQTAQGNLDSAYQVALQ 243
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G+ ++I + +++ + +L D S ++ S Q Q A
Sbjct: 244 AQVTVGTQQAQITTLNSSGSNFGEQLKEQISKLQSVDYTSAISQFSQQQVSLQAAQ 299
>gi|238788321|ref|ZP_04632115.1| Flagellar hook-associated protein 3 [Yersinia frederiksenii ATCC
33641]
gi|238723567|gb|EEQ15213.1| Flagellar hook-associated protein 3 [Yersinia frederiksenii ATCC
33641]
Length = 333
Score = 51.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/187 (11%), Positives = 55/187 (29%), Gaps = 3/187 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T+ Q + + ++S+G RV + +D+ S A ++
Sbjct: 10 LSTSMIYQQTMQGVTNAQSLWMQSGQQLSTGKRVVNPSDDPMAASQAVMVSQSEAENGQY 69
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLR 120
+ A + +S+A + +I++ D S+ +++ L+ QL
Sbjct: 70 TLARSFARQSSSLETTVLSQATTTIQSIQSLIIGAAKDSLSDDDRASLATQLQGLKDQLL 129
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ A + NG + + + + + S
Sbjct: 130 NQANSTDGNGRYMFGGFKSDTPPFLVSATGEVTYAGSDTPITQKVDSNRSMTVGHTGSSV 189
Query: 181 TDGTERY 187
+
Sbjct: 190 FMALTKN 196
>gi|57241926|ref|ZP_00369866.1| flagellin B homolog (fla), putative [Campylobacter upsaliensis
RM3195]
gi|57017118|gb|EAL53899.1| flagellin B homolog (fla), putative [Campylobacter upsaliensis
RM3195]
Length = 751
Score = 51.3 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/211 (10%), Positives = 68/211 (32%), Gaps = 3/211 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++ Q L + ++S G+++ D+ ++A+ + ++ + L + +A
Sbjct: 10 TNSIQNTMSGASALNKLSVQLSLGMKIQDSYEDASIYIDNTRLEYELETLKQIKEATSSA 69
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQSEITQLQSQLRDIARGSS 127
+ + + ++ K K+T T ++I E+ +++ Q+ +A S
Sbjct: 70 KEMTSNSMKALQDMVKLLENFKVKVTQAASDSNSQTSREAIAKELEKIKEQIVQLANTSI 129
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
+ L + G + T Y + + + D ++
Sbjct: 130 NGQYLFAGAQLNHKPFDSKGNYFGDKNNVNVVTGAGTESPYNIPGFDLFFKADGDYQKQI 189
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+ + + D + +
Sbjct: 190 TTNESFTDNRYDLSKDPDKKQYLKGDNLWQD 220
Score = 49.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 33/348 (9%), Positives = 81/348 (23%), Gaps = 5/348 (1%)
Query: 88 MSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
K T G S + ++++ S S
Sbjct: 396 FINSKMTDTQGGATNGADYDNTFFEKHGNSVIGNVSQVIQGTNAYATDDTKLSEVMSGNA 455
Query: 148 SVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDID 207
+ ++ + L TV + + + +
Sbjct: 456 MDSILNLTVNSKGGNTYNVTVNLQNSTVSFPDPANPGQTITFPITHTNPTTGNNGVVTPP 515
Query: 208 VSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSG 267
+ F + N A+ + + T +
Sbjct: 516 NEITYRQINDIIGMFASDQVPTQTITPNNGQITNAQYDTLQKLMSDSKS-----TVNVTM 570
Query: 268 SKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDS 327
++ + N + + + P ++ + + + +
Sbjct: 571 DYRGRISVTDKLSTGTNIGVSLSDSQSGHFPQPPYNHTASQVAGPDFSFNANNSLVIDEP 630
Query: 328 RKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISS 387
D+ K++D V R M+ + +D +G+ +
Sbjct: 631 NVDVIKDLDLMIEAVLSGNMRANADGDNPRNTGMQGALERLDHLSDHINKLNTTMGAYHN 690
Query: 388 RIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
I + + V+ ++ DAD A L Q Q +++A
Sbjct: 691 NIDNVNTRVTFLGVNVQTLKTKVNDADYAETLMNLMQTQLAYQASMKA 738
>gi|290474981|ref|YP_003467865.1| flagellar hook-filament junction protein [Xenorhabdus bovienii
SS-2004]
gi|289174298|emb|CBJ81088.1| flagellar biosynthesis; hook-filament junction protein [Xenorhabdus
bovienii SS-2004]
Length = 320
Score = 50.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/227 (9%), Positives = 58/227 (25%), Gaps = 2/227 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN + +++S+G RV + +D+ S + ++
Sbjct: 3 VSTNLLYSQKMDGILGAQSKWMRYGEQLSTGKRVINPSDDPLAASQSIMVSQSESKNQQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV--ERGTDSKSIQSEITQLQSQLRD 121
A + + + S + V + + + A + D +S ++ + QL +
Sbjct: 63 MTARIFARNSMSAQLSITSNIVSVATNVFETLVAAADEQSDQDRESYAQQLEGFKQQLLN 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ + NG A + + ++ D
Sbjct: 123 LGNKTDGNGRYIFGGYKTDVPPFKADESGKIHYKGGHEEITQQVDDNRSMIIAHTGKQVF 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
T + + + + + +
Sbjct: 183 LSTTTNPIKEPGGGTGEADVFATLDLAIKALRTPYSTASESEKNDAM 229
>gi|2576269|emb|CAA75364.1| flagellin [Borrelia burgdorferi]
Length = 159
Score = 50.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/159 (8%), Positives = 40/159 (25%)
Query: 269 KSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSR 328
+ + A+ S N + + + T
Sbjct: 1 SNSKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVANLFSGEGAQAAQTAPVQE 60
Query: 329 KDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ + + + ++ I+ I+ + +G+ +R
Sbjct: 61 GAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNR 120
Query: 389 IHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+ +D + + ++ ++ DA M E +
Sbjct: 121 LESIKDSTEYAIENLKASYAQIKDATMTDEVVAATTNSI 159
>gi|117923394|ref|YP_864011.1| flagellin domain-containing protein [Magnetococcus sp. MC-1]
gi|117607150|gb|ABK42605.1| flagellin domain protein [Magnetococcus sp. MC-1]
Length = 275
Score = 50.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/181 (12%), Positives = 56/181 (30%), Gaps = 11/181 (6%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEV--VQDRVSSGLRVSDAADNAAYWSIAQIMK--SDN 57
+I N ++ A + R +L R+ S R+ A A + + + +
Sbjct: 3 LTIYGNVFSLDAHRA-RSRRSDLSDRGTFKRLIS--RIEPDAGEPAVLDMLRDYRRANRL 59
Query: 58 GALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER----GTDSKSIQSEIT 113
++ G S + +A+ + + + I+ + ++ G+ E+
Sbjct: 60 RTVNQARQNANAGISTIQVAEQALRETESALQRIQEITSRPLDGEPVEGSKRAKYDQEVA 119
Query: 114 QLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE 173
QL + +A S + +R L S + ++ +
Sbjct: 120 QLVRDIDGLAGESQRHSMRLMRGGLSSHSFAVGVDQPEEICFTVDDTSSAQMGVEASVAW 179
Query: 174 T 174
Sbjct: 180 D 180
>gi|59710064|gb|AAW88561.1| flagellin [Borrelia lonestari]
Length = 99
Score = 50.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 7/68 (10%), Positives = 24/68 (35%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
++ + ++ I+ I+ T +G+ +R+ + + ++
Sbjct: 32 QGGISSPINVTTAIDANASLTKIEDAIRMVTDQRANLGAFQNRLESVKASTDYAIENLKA 91
Query: 406 GVGRLVDA 413
++ DA
Sbjct: 92 SYAQIKDA 99
>gi|4760513|dbj|BAA77317.1| flagellin [Pseudomonas putida]
gi|4760517|dbj|BAA77319.1| flagellin [Pseudomonas putida]
Length = 121
Score = 50.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 6/76 (7%), Positives = 28/76 (36%)
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
+ + + + + ++ + +D ++ + ++G++ +R ++
Sbjct: 46 AGKTSAVEMESTVSNLNITDAQSAQQAIQVLDGAMQSLDSQRSQLGAVQNRFDSTVANLQ 105
Query: 398 LMRDAVEKGVGRLVDA 413
+ + R+ DA
Sbjct: 106 SISENSTAARSRIQDA 121
>gi|49477312|ref|YP_035859.1| flagellar hook-associated protein FlgL [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|49328868|gb|AAT59514.1| flagellar hook-associated protein 3 [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 287
Score = 50.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/168 (8%), Positives = 53/168 (31%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLFMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + ++ + ++ + E+ + +++ I
Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLMLQ----ALSEQNGEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEKPPFTEDGTYQGGPNDVNWQLNDGY 166
>gi|14279271|gb|AAK58547.1| flagellin [Borrelia burgdorferi]
Length = 202
Score = 50.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/175 (8%), Positives = 45/175 (25%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 28 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 87
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 88 IYAANVANLFSGEGAQTAQAAPVQEGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 147
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
++ I+ I+ + +G+ +R+ +D + ++ ++ DA M E
Sbjct: 148 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTDYAIENLKASYAQIKDATMTDE 202
>gi|302344091|ref|YP_003808620.1| Flagellin and related hook-associated protein [Desulfarculus
baarsii DSM 2075]
gi|301640704|gb|ADK86026.1| Flagellin and related hook-associated protein [Desulfarculus
baarsii DSM 2075]
Length = 817
Score = 50.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/360 (8%), Positives = 95/360 (26%), Gaps = 6/360 (1%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDI 76
L ++ +Q +V +G + ++ + +S + S +
Sbjct: 16 LSNLLAAQYKLQKQVLTGQVGTTPSEQGGASNAIMRTNLQMDLISQYRVNLESADSWLTS 75
Query: 77 AKAGMSKAIDVMSTIK---NKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
++ M +++++ K K++ G ++ + ++ E++ + +QL ++ + NG
Sbjct: 76 SETAMQNMVNILTQAKTVAEKMSTGTQQSLEQQTAAEEVSNIFAQLVTLS-NTKVNGLYI 134
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
+S I + + + R + +
Sbjct: 135 FGGTSTNSRPVITALAAAGPSSLTRTVAAGHDSTADVVANPLTSGAYAFQIGRNSVGTSS 194
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
L + + + + T + + A + + +
Sbjct: 195 TITISANNTLGETGIVPPLSFDAGAANWITTQTAQDYQAQLLTLRYAFASSSSEVSARIG 254
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+ ++ + S + DI T + +
Sbjct: 255 ETFSWTGDSAAGEQTFHSYAKVSFSGAGTATIDIDGAPTYTADSAQELVEAVNASGGDYF 314
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEM--VSFIDTQ 371
D + + S ++++ D ++ + + ID
Sbjct: 315 AWAEGDDVYFMIKDGVAPGTVHEVSASGGPVSVSYPTLDDLTDQINNGNQATGMVSIDNA 374
>gi|37525848|ref|NP_929192.1| flagellar hook-associated protein FlgL [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|36785277|emb|CAE14218.1| Flagellar hook-associated protein 3 (HAP3) (Hook-filament junction
protein) [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 321
Score = 50.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/200 (12%), Positives = 54/200 (27%), Gaps = 3/200 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN + ++SSG RV + +D+ S ++
Sbjct: 3 VSTNILYDQKMTSITTAQSKWMQQGAQLSSGQRVINPSDDPMAASQGVMVAQAEAQNQQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL---QSQLR 120
A + + + + +SKA+ V+ I + A V + S QL + QL
Sbjct: 63 ITARSFAKNAISMQLSVVSKAVGVVQDIHESLVATVNGVLSDEDRNSLAIQLTGFKEQLV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++ + NG + + ++
Sbjct: 123 NLGNTTDGNGRYIFAGYKTDMKPFDESTTGTVSYLGGSEEITQKVDSNRSMIIGHTGKQV 182
Query: 181 TDGTERYGLLDRNHKIKVEP 200
+ + + +
Sbjct: 183 FLSSTSNPIKEPDGNQSESD 202
>gi|14279273|gb|AAK58548.1| flagellin [Borrelia burgdorferi]
Length = 202
Score = 50.9 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 14/175 (8%), Positives = 46/175 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 28 QYNQMHMLSNKSASQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 87
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 88 IYAANVANLFSGEGAQTAQAAPVQEGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 147
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E
Sbjct: 148 SLAKIENAIRMVSDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDE 202
>gi|15420987|gb|AAK97535.1| flagellin [Borrelia lonestari]
Length = 140
Score = 50.9 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 9/73 (12%), Positives = 26/73 (35%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
++ + ++ I+ I+ T +G+ +R+ + + ++
Sbjct: 68 QGGISSPINVTTAIDANASLTKIEDAIRMVTDQRANLGAFQNRLESVKASTDYAIENLKA 127
Query: 406 GVGRLVDADMASE 418
++ DA M E
Sbjct: 128 SYAQIKDAIMTDE 140
>gi|113734904|dbj|BAF30778.1| flagellin [Campylobacter lari]
Length = 249
Score = 50.9 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 42/124 (33%), Gaps = 5/124 (4%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
L + E + +++ + + + A +IA ++S + +
Sbjct: 14 YLNQAQKSQEKALENIATMRAIDGS--DGANLAIADSLRSQYSTIDQGILNAYDSVGVLQ 71
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGEN 132
IA + ++ + + +E +L S + D ++FNG+N
Sbjct: 72 IADSALNNISATADRLNELSVRSNSAALNDRQKSMLNAEANKLISSINDAFSNATFNGKN 131
Query: 133 WLRT 136
++
Sbjct: 132 VFQS 135
>gi|14279299|gb|AAK58561.1| flagellin [Borrelia burgdorferi]
Length = 202
Score = 50.9 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/167 (7%), Positives = 43/167 (25%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + + G + + A+ S N + +
Sbjct: 36 SNKSASQNVRAAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVAN 95
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ T + + + + ++ I+
Sbjct: 96 LFSGEGAQTAQAAPVQEGIQQEGAQQPAPATAPSQGGINSPVNVTTTVYAYTSLAKIENA 155
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
I+ + +G+ +R+ ++ + + ++ ++ DA M E
Sbjct: 156 IRMVSDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDE 202
>gi|262273521|ref|ZP_06051335.1| flagellar hook-associated protein FlgL [Grimontia hollisae CIP
101886]
gi|262222499|gb|EEY73810.1| flagellar hook-associated protein FlgL [Grimontia hollisae CIP
101886]
Length = 307
Score = 50.9 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/196 (9%), Positives = 62/196 (31%), Gaps = 4/196 (2%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
++ + V + S ++ A+D+ ++ + ++ I ++
Sbjct: 14 TSIQTSTAGVNRVLTEMGSQKKMLAASDDPLGAVQVMMLNREQSNIAQFQKNITNLEKQL 73
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGTD----SKSIQSEITQLQSQLRDIARGSSFNG 130
+ ++ + + + + + + + + ++I SE+ + QL A + NG
Sbjct: 74 TLTESHIDASNNALLRAEELVASVLNASNSDKTGREAIASELEGILDQLLSEANSQNPNG 133
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+ + A G ++ N + ++ ++
Sbjct: 134 DYIFSGTKTDTPAVARDPDTGLYVFQGNQEQRMVSVAESTQIPANQTAHDLYFNGADDGS 193
Query: 191 DRNHKIKVEPQVLKDI 206
D + + L+D
Sbjct: 194 DIFNTLASVIDDLRDP 209
>gi|223040916|ref|ZP_03611179.1| flagellin [Campylobacter rectus RM3267]
gi|222877811|gb|EEF12929.1| flagellin [Campylobacter rectus RM3267]
Length = 252
Score = 50.5 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 54/173 (31%), Gaps = 5/173 (2%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
++ ++Q L N + +S +S ++A +IA ++S + L
Sbjct: 8 ANSSLSNQYLEQAQNNGAKALNNISVQRALSGV--DSANLAIADSLRSQSSTLEQGVANA 65
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
+ IA + ++ I K I+SE L ++ +
Sbjct: 66 NDAIGILQIADSTLANITQSADRIGELSVRYSGGILNADQQKMIKSEANALVDAMKQSTQ 125
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+SFNG+N + T + SV S V L
Sbjct: 126 QASFNGKNVFGGQMSFLTGNGTASVNLSAPNFSGIDVSDGESVSKFIGSVNAL 178
>gi|196039109|ref|ZP_03106416.1| putative flagellar hook-associated protein FlgL [Bacillus cereus
NVH0597-99]
gi|196030254|gb|EDX68854.1| putative flagellar hook-associated protein FlgL [Bacillus cereus
NVH0597-99]
Length = 287
Score = 50.5 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/168 (8%), Positives = 54/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + ++ + ++ + E+ + +++ I
Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLMLQ----ALSEQNGEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G+ +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSTEKPPFTEDGTYQGGQNDVNWQLNDGY 166
>gi|14279275|gb|AAK58549.1| flagellin [Borrelia burgdorferi]
gi|14279279|gb|AAK58551.1| flagellin [Borrelia burgdorferi]
gi|14279281|gb|AAK58552.1| flagellin [Borrelia burgdorferi]
gi|14279283|gb|AAK58553.1| flagellin [Borrelia burgdorferi]
gi|14279285|gb|AAK58554.1| flagellin [Borrelia burgdorferi]
gi|14279287|gb|AAK58555.1| flagellin [Borrelia burgdorferi]
gi|14279289|gb|AAK58556.1| flagellin [Borrelia burgdorferi]
gi|14279291|gb|AAK58557.1| flagellin [Borrelia burgdorferi]
Length = 202
Score = 50.5 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/175 (8%), Positives = 46/175 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 28 QYNQMHMLSNKSASQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 87
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 88 IYAANVANLFSGEGAQTAQAAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 147
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E
Sbjct: 148 SLAKIENAIRMVSDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDE 202
>gi|51894115|ref|YP_076806.1| flagellar-hook associated protein [Symbiobacterium thermophilum IAM
14863]
gi|51857804|dbj|BAD41962.1| flagellar-hook associated protein [Symbiobacterium thermophilum IAM
14863]
Length = 293
Score = 50.5 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/127 (13%), Positives = 41/127 (32%), Gaps = 6/127 (4%)
Query: 6 TN-HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
TN +A ++L + Q RV G + +D+ A + L
Sbjct: 4 TNWMLVNTAIRELEGLRAQYARAQKRVY-GRALERPSDDPQRVIEAIDLTGMKVKLERAQ 62
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG----VERGTDSKSIQSEITQLQSQLR 120
A + IA+ ++ + + + + + T +++ +I L+ ++
Sbjct: 63 RAATDAKEWLSIAETSLTAMSEDLQAVYETMIQFGSPANQESTARENLALQIEGLRDAIK 122
Query: 121 DIARGSS 127
Sbjct: 123 REMNTQH 129
Score = 39.3 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 36/93 (38%)
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
T AN + + + + A ++G ++ E + + VE+
Sbjct: 190 TEVANAIRTGTVEDVTKHLDKVQAAADELLARRSEVGLAYQQVEQFEGYSRDGLITVEER 249
Query: 407 VGRLVDADMASESTRLSALQTQQQLAVQALSIV 439
+G++ D+A ++ Q Q+A+ A S+
Sbjct: 250 LGKISGGDIAEAVMEMTQAQQAFQVALTAFSMA 282
>gi|2576275|emb|CAA75367.1| flagellin [Borrelia burgdorferi]
Length = 154
Score = 50.5 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 9/86 (10%), Positives = 28/86 (32%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 63 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 122
Query: 394 DFIKLMRDAVEKGVGRLVDADMASES 419
D + + ++ ++ DA M E
Sbjct: 123 DSTEYAIENLKASYAQIKDATMTDEV 148
>gi|332161329|ref|YP_004297906.1| flagellar hook-associated protein FlgL [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|318605250|emb|CBY26748.1| flagellar hook-associated protein FlgL [Yersinia enterocolitica
subsp. palearctica Y11]
gi|325665559|gb|ADZ42203.1| flagellar hook-associated protein FlgL [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
Length = 326
Score = 50.5 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/184 (12%), Positives = 55/184 (29%), Gaps = 6/184 (3%)
Query: 8 HSAMSASQKLRDINYNLE---VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
++M Q ++ + ++S+G RV + +D+ S A ++ + +
Sbjct: 4 STSMLYQQNMQGVTNAQSLWMQSGQQLSTGKRVVNPSDDPMAASQAVMVSQSQSENNQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLRD 121
A + +S+A + +I++ D S+ +++ L+ QL +
Sbjct: 64 LARSFARQSSSLETTVLSQATSTIQSIQSLIIGAAKDSLSDDDRASMATQLQGLKDQLLN 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
A + NG + + +Q S
Sbjct: 124 QANSTDGNGRYMFGGFQSDKAPFAVSNTGEVTYVGGDVAIQQRVDSNRTMTVGHTGSSVF 183
Query: 182 DGTE 185
Sbjct: 184 MALT 187
>gi|14279257|gb|AAK58540.1| flagellin [Borrelia burgdorferi]
gi|14279259|gb|AAK58541.1| flagellin [Borrelia burgdorferi]
gi|14279261|gb|AAK58542.1| flagellin [Borrelia burgdorferi]
gi|14279263|gb|AAK58543.1| flagellin [Borrelia burgdorferi]
gi|14279269|gb|AAK58546.1| flagellin [Borrelia burgdorferi]
gi|14279277|gb|AAK58550.1| flagellin [Borrelia burgdorferi]
Length = 202
Score = 50.5 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/175 (8%), Positives = 46/175 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 28 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 87
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 88 IYAANVANLFSGEGAQTAQAAPVQEGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 147
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E
Sbjct: 148 SLAKIENAIRMISDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDE 202
>gi|11611515|dbj|BAB18962.1| flagellin protein [Borrelia afzelii]
gi|11611517|dbj|BAB18963.1| flagellin protein [Borrelia afzelii]
gi|11611519|dbj|BAB18964.1| flagellin protein [Borrelia afzelii]
Length = 200
Score = 50.5 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ + + +++ V+ +K D SIQ EI QL ++
Sbjct: 1 RNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINR 60
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 61 IADQAQYNQMHMLSNKSASQNVKTAE 86
>gi|117923398|ref|YP_864015.1| flagellin-like protein [Magnetococcus sp. MC-1]
gi|117607154|gb|ABK42609.1| Flagellin and related hook-associated proteins-like protein
[Magnetococcus sp. MC-1]
Length = 401
Score = 50.5 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 38/95 (40%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M + + + +L+D + +Q++ +SG V+ +D+ + + +
Sbjct: 1 MLRVTQSTLYSTTVTQLQDQYRTMSQIQEKSTSGQEVNRPSDDPTIAYRDMLFSTQLSEV 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI 95
A+ L S ++ +A+ +S M + +
Sbjct: 61 DALVRTTDLASERMRMAETNLSTMEGKMLDAQQLV 95
>gi|229090700|ref|ZP_04221933.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock3-42]
gi|228692642|gb|EEL46368.1| Flagellar hook-associated protein 3 [Bacillus cereus Rock3-42]
Length = 287
Score = 50.5 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 15/168 (8%), Positives = 54/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLLMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + ++ + ++ + E+ + +++ I
Sbjct: 63 QKDLADSKNVLTQTENTLQGVFKSLTRADQLMLQ----ALSEQNGEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G+ +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSAEKPPFTEDGTYQGGQNDVNWQLNDGY 166
>gi|113734900|dbj|BAF30775.1| flagellin [Campylobacter lari]
gi|113734908|dbj|BAF30781.1| flagellin [Campylobacter lari]
gi|222425509|dbj|BAH20702.1| flagellin [Campylobacter lari]
Length = 249
Score = 50.5 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 42/124 (33%), Gaps = 5/124 (4%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
L + E + +++ + + + A +IA ++S + +
Sbjct: 14 YLNQAQKSQEKALENIATMRAIDGS--DGANLAIADSLRSQYSTIDQGILNAYDSVGVLQ 71
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGEN 132
IA + ++ + + +E +L S + D ++FNG+N
Sbjct: 72 IADSALNNISATADRLNELSVRSNSAALNDRQKSMLNAEANKLISSINDAFSNATFNGKN 131
Query: 133 WLRT 136
++
Sbjct: 132 VFQS 135
>gi|2576265|emb|CAA75375.1| flagellin [Borrelia burgdorferi]
Length = 151
Score = 50.5 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 9/86 (10%), Positives = 28/86 (32%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 62 GAQQPAPXTAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 121
Query: 394 DFIKLMRDAVEKGVGRLVDADMASES 419
D + + ++ ++ DA M E
Sbjct: 122 DSTEYAIENLKASYAQIKDATMTDEV 147
>gi|144897637|emb|CAM74501.1| flagellin [Magnetospirillum gryphiswaldense MSR-1]
Length = 271
Score = 50.5 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 70/180 (38%), Gaps = 2/180 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I SA + + + +S+G +VS D+A ++ A+ + LSAV
Sbjct: 6 INLTASARDVLVTQQSLAASAAQRSQNLSTGKKVSRVTDDAVAFAAARALTERASDLSAV 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA--GVERGTDSKSIQSEITQLQSQLRD 121
D++G G S ++ A AG ++ +K TA + ++ ++ QL+ Q+
Sbjct: 66 KDSVGQGVSTINAALAGAEGVNSLLDQMKGIATAAIASGDSAERSALATQYNQLRGQVDS 125
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+A + +NG N L + + V S + + + ++T
Sbjct: 126 LAADAGYNGVNLLSASSSALNVAFGTQVGDSLTVNGQNVSSAGLGVTAVAADGSDFSAAT 185
Score = 47.0 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 40/88 (45%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
++ +D+ A +GS + + ++ + + G RL +AD+ E+ L
Sbjct: 184 ATLAQLDSAGATVNAVQSSLGSNLTALGIRGEAAASQAVIAQAGASRLTEADLNEEAAML 243
Query: 423 SALQTQQQLAVQALSIVNNSTARILSLF 450
A QT+QQLA + + +L+LF
Sbjct: 244 VATQTRQQLARAGQGVSQRAQESLLTLF 271
>gi|83747647|ref|ZP_00944683.1| FlgL [Ralstonia solanacearum UW551]
gi|207728353|ref|YP_002256747.1| flagellar hook-associated protein 3 [Ralstonia solanacearum MolK2]
gi|207739730|ref|YP_002258123.1| flagellar hook-associated protein 3 [Ralstonia solanacearum
IPO1609]
gi|83725699|gb|EAP72841.1| FlgL [Ralstonia solanacearum UW551]
gi|206591599|emb|CAQ57211.1| flagellar hook-associated protein 3 [Ralstonia solanacearum MolK2]
gi|206593112|emb|CAQ60018.1| flagellar hook-associated protein 3 [Ralstonia solanacearum
IPO1609]
Length = 316
Score = 50.5 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/242 (8%), Positives = 62/242 (25%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
++ NL +Q ++S+G+ ++ A DN A ++ ++++
Sbjct: 15 SMQSTQSNLVKLQQQLSTGIALNSAGDNPAAMGQVLQLQQSQDTSDQFQVNRDATNARLT 74
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+ +S I + K A + Q++ Q + + ++ + +
Sbjct: 75 SVSSALSDVISTLQQGKQSTIAANTSLLTDSQRVGILAQVKQQYQQLLSSANQRDASGVA 134
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
G++ + ++ T + + N
Sbjct: 135 LFGGANGTTDPFVSSAGSVQYAGSGQPPTVQVAQDISMPNSVSGDSVFVRVPNTDASNPS 194
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ ++ T S + + + A +
Sbjct: 195 ANQSVFKTYENLITALSKPITTSADVTTMQAAVKTAQNNLDNAYQVALQAQVTVGTQQSQ 254
Query: 256 PA 257
Sbjct: 255 IT 256
Score = 37.4 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 39/113 (34%)
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAG 380
+ + + + L+ + D + A++ + +D + A A
Sbjct: 187 NTDASNPSANQSVFKTYENLITALSKPITTSADVTTMQAAVKTAQNNLDNAYQVALQAQV 246
Query: 381 KIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+G+ S+I + +++ + +L D S ++ S Q Q A
Sbjct: 247 TVGTQQSQITTLNSSGSNFGEQLKEQISKLQSVDYTSAISQFSQQQVSLQAAQ 299
>gi|14279267|gb|AAK58545.1| flagellin [Borrelia burgdorferi]
Length = 202
Score = 50.5 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 14/175 (8%), Positives = 46/175 (26%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 28 QYNQMHMLSNTSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 87
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 88 IYAANVANLFSGEGAQTAQAAPVQEGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 147
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E
Sbjct: 148 SLAKIENAIRMISDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDE 202
>gi|14279265|gb|AAK58544.1| flagellin [Borrelia burgdorferi]
gi|14279293|gb|AAK58558.1| flagellin [Borrelia burgdorferi]
Length = 202
Score = 50.5 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/175 (7%), Positives = 45/175 (25%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + + G + + A+ S N +
Sbjct: 28 QYNQMHMLSNKSASQNVRAAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 87
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 88 IYAANVANLFSGEGAQTAQAAPVQEGIQQEGAQQPAPATAPSQGGINSPVNVTTTVDANT 147
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E
Sbjct: 148 SLAKIENAIRMVSDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDE 202
>gi|116805590|gb|ABK27780.1| flagellin [Treponema pedis]
Length = 170
Score = 50.5 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 3/135 (2%)
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARG 125
G + +A+A + + D+M I+ D IQ E++QL +++ IA
Sbjct: 1 NGVYFIQVAEAYLQETTDIMQRIRELAVQASNGIYSAEDRMHIQVEVSQLVAEVDRIASS 60
Query: 126 SSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTE 185
+ FNG N L T + F N ++ + V +
Sbjct: 61 AQFNGMNMLTGRFARETGENVVTASMWFHIGANMDQRMRVYIGTMSAAAVGIREIGSEKI 120
Query: 186 RYGLLDRNHKIKVEP 200
+ + +
Sbjct: 121 MTIETADSANMSIGT 135
Score = 38.2 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 16/50 (32%)
Query: 353 DAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + ID +K +G+ +R+ L I + +
Sbjct: 121 MTIETADSANMSIGTIDEGLKKINKQRADLGAYQNRMELTVVGINIAAEN 170
>gi|299068739|emb|CBJ39978.1| flagellar hook-filament junction protein protein 3 [Ralstonia
solanacearum CMR15]
Length = 316
Score = 50.1 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/254 (10%), Positives = 71/254 (27%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +++ ++ NL +Q ++SSG+ ++ A DN A ++
Sbjct: 3 VSTAQFFSASTSSMQTTQSNLVKLQQQISSGIALTAAGDNPAAMGQVLQLQQSQDTSDQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
++++ + +S I + K A + Q++ Q + +
Sbjct: 63 QVNRDATYARLNTVSSALSDVISTLQQGKQSTIAANTTLLTDSQRVGILAQVKQQYQQLL 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ + + G++ + G ++ T + + +
Sbjct: 123 SSANQRDASGVALFAGANGTTAPFVSSGGSVQYVGSGQPPTVQVAQDISMSNSVSGDSVF 182
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
N + ++ T S + T ++ + A
Sbjct: 183 VRVPNSDASNANANQSVFKTYENLITALSKPITTSADVTAIQTAVQTAQGNLDSAYQVAL 242
Query: 244 GIATIPVPLPAAPA 257
A
Sbjct: 243 QAQVTVGTQQAQIT 256
>gi|123442777|ref|YP_001006754.1| flagellar hook-associated protein FlgL [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|122089738|emb|CAL12591.1| flagellar hook-associated protein 3 [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 326
Score = 50.1 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 55/184 (29%), Gaps = 6/184 (3%)
Query: 8 HSAMSASQKLRDINYNLE---VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
++M Q ++ + ++S+G RV + +D+ S A ++ S +
Sbjct: 4 STSMLYQQNMQGVTNAQSLWMQSGQQLSTGKRVVNPSDDPMAASQAVMVSQSQSENSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLRD 121
A + +S+A + +I++ D S+ +++ L+ QL +
Sbjct: 64 LARSFARQSSSLETTVLSQATSTIQSIQSLIIGAAKDSLSDDDRASMATQLQGLKDQLLN 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
A + NG + + +Q S
Sbjct: 124 QANSTDGNGRYMFGGFQSDKAPFAVSNTGEVTYVGGDVAIQQRVDSNRTMTVGHTGSSVF 183
Query: 182 DGTE 185
Sbjct: 184 MALT 187
>gi|238762353|ref|ZP_04623324.1| hypothetical protein ykris0001_25950 [Yersinia kristensenii ATCC
33638]
gi|238699338|gb|EEP92084.1| hypothetical protein ykris0001_25950 [Yersinia kristensenii ATCC
33638]
Length = 294
Score = 50.1 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/159 (8%), Positives = 48/159 (30%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+ + + ++++SG RV+ +D+ +++ +S + S
Sbjct: 4 NMANRTIEYSKLDEQLTSGKRVNRISDDPVASMQLVQLENSKSDVSQYKINVVRLSGNYS 63
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+ +A ++ + +++K+ A + + ++ L + +
Sbjct: 64 VQEASLNSLDKQLLVVRDKMLAAKNSNHSATESATFGREINLLLDGMMSDLNTKNSEGNY 123
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
G+ + + + + T
Sbjct: 124 LFSGTKSNIKPVEYDSTTQKYTFNGNSERRDAVVGNGIT 162
>gi|14279295|gb|AAK58559.1| flagellin [Borrelia burgdorferi]
gi|14279297|gb|AAK58560.1| flagellin [Borrelia burgdorferi]
Length = 202
Score = 50.1 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/175 (7%), Positives = 45/175 (25%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + + G + + A+ S N +
Sbjct: 28 QYNQMHMLSNKSASQNVRAAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 87
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 88 IYAANVANLFSGEGAQTAQAAPVQEGIQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 147
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
++ I+ I+ + +G+ +R+ ++ + + ++ ++ DA M E
Sbjct: 148 SLAKIENAIRMVSDQRANLGAFQNRLESIKNSTEYAIENLKASYAQIKDATMTDE 202
>gi|4760509|dbj|BAA77315.1| flagellin [Pseudomonas putida]
Length = 123
Score = 50.1 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 6/76 (7%), Positives = 28/76 (36%)
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
+ + + + + ++ + +D ++ + ++G++ +R ++
Sbjct: 48 AGKTSAVEMESTVSNLNITDAQSAQQAIQVLDGAMQSLDSQRSQLGAVQNRFDSTVANLQ 107
Query: 398 LMRDAVEKGVGRLVDA 413
+ + R+ DA
Sbjct: 108 SISENSTAARSRIQDA 123
>gi|296103604|ref|YP_003613750.1| flagellar hook-associated protein 3 [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295058063|gb|ADF62801.1| flagellar hook-associated protein 3 [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 306
Score = 50.1 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 61/199 (30%), Gaps = 4/199 (2%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
++++ + V R+S+G + A+D+ A + A + L S+
Sbjct: 11 NSAETMTKRMSQSNDVYLRMSAGKTLLKASDDPAAATDAVKHQDALAKLEMYSNVRSRAR 70
Query: 72 SKVDIAKAGMSKAIDVMSTI-KNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSS 127
++ ++ ++++T K KI A D +++ EI +++ L D+A
Sbjct: 71 GALEYQDNILNGVGNLLTTTLKEKIVAAKTGSYSPEDRRALGEEIKGIRANLMDLANNRD 130
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
+G + A V D+ + + + D D
Sbjct: 131 ASGNYIFSGFKTDTPAFDEDGVYQGSTNADHVRRLTVADGTGMQVSHLGRDIFGDIFTVL 190
Query: 188 GLLDRNHKIKVEPQVLKDI 206
Sbjct: 191 EDAVAALTADPGDADYDAN 209
>gi|284007168|emb|CBA72452.1| flagellar hook-associated protein FlgL [Arsenophonus nasoniae]
Length = 313
Score = 50.1 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 48/168 (28%), Gaps = 4/168 (2%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ L R+++G R+ +AD+ A + + L+ A ++
Sbjct: 17 NSMMYSQSQLADKYQRITTGKRLLQSADDPAAAAENLQINQTQTRLAQYKTARNFSQHQM 76
Query: 75 DIAKAGMSKAIDVMSTIKNKIT----AGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ K D+ IK + ++ +E+ L+S+L +A +G
Sbjct: 77 QSQLQVVEKMEDLSRRIKQTFVAVSNQSIMSEDARQAYATELESLKSELVGLANSKDSSG 136
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ + + + ++
Sbjct: 137 SYLFAGYKTDTVPLVVGTNGVVNYQGSQDAIKQHIDADREVTVNFTAQ 184
Score = 38.2 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 19/301 (6%), Positives = 72/301 (23%), Gaps = 1/301 (0%)
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
++ + + ++ + +++
Sbjct: 3 TTRLSSQFMHYQKTNSMMYSQSQLADKYQRITTGKRLLQSADDPAAAAENLQINQTQTRL 62
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ + ++ + + K L+ A + ++ +
Sbjct: 63 AQYKTARNFSQHQMQSQLQVVEKMEDLSRRIKQTFVAVSNQSIMSEDARQAYATELESLK 122
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ S S S + + + D + + ++
Sbjct: 123 SELVGLANSKDSSGSYLFAGYKTDTVPLVVGTNGVVNYQGSQDAIKQHIDADREVTVNFT 182
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
T + ++ T + + + S + +K +
Sbjct: 183 AQQVLQTATGGDIFQSLDLAINTLKTPYQSANPQAQSILAANIDSAH-SDLQNTMKSLST 241
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
+ ++GS + + + +++ +L + DMA+E + Q + +
Sbjct: 242 ISSQLGSQLKEVEQLNSRSEDVSLLLKERQSQLTNTDMAAEIAEYYQEEAILQASYSLFA 301
Query: 438 I 438
Sbjct: 302 Q 302
>gi|300696920|ref|YP_003747581.1| flagellar hook-filament junction protein protein 3 [Ralstonia
solanacearum CFBP2957]
gi|299073644|emb|CBJ53164.1| flagellar hook-filament junction protein protein 3 [Ralstonia
solanacearum CFBP2957]
Length = 316
Score = 50.1 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/242 (8%), Positives = 62/242 (25%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
++ NL +Q ++S+G+ ++ A DN A ++ ++++
Sbjct: 15 SMQSTQSNLVKLQQQISTGIALNSAGDNPAAMGQVLQLQQSQDTNDQFQVNRDATNARLT 74
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLR 135
+ +S I + K A + Q++ Q + + ++ + +
Sbjct: 75 SVSSALSDVISTLQQGKQSTIAANTSLLTDSQRVGILAQVKQQYQQLLSSANQRDASGVA 134
Query: 136 TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHK 195
G++ + ++ T + + N
Sbjct: 135 LFGGANGTTDPFVSSAGSVQYAGSGQPPTVQVAQDISMPNSVSGDSVFVRVPNTDASNPS 194
Query: 196 IKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAA 255
+ ++ T S + + + A +
Sbjct: 195 ANQSVFKTYENLITALSKPITTSADVTTMQAAVQTAQNNLDNAYQVALQAQVTVGTQQSQ 254
Query: 256 PA 257
Sbjct: 255 IT 256
Score = 37.4 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 29/296 (9%), Positives = 86/296 (29%)
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ + + + + S + Q + L+ + + D N + +
Sbjct: 4 STAQFFAASTASMQSTQSNLVKLQQQISTGIALNSAGDNPAAMGQVLQLQQSQDTNDQFQ 63
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
V SV A + + + ++ A + + +A + +
Sbjct: 64 VNRDATNARLTSVSSALSDVISTLQQGKQSTIAANTSLLTDSQRVGILAQVKQQYQQLLS 123
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ N + + + + + + + + G++ +
Sbjct: 124 SANQRDASGVALFGGANGTTDPFVSSAGSVQYAGSGQPPTVQVAQDISMPNSVSGDSVFV 183
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
+ + + + L+ + D + A++ + +D + A
Sbjct: 184 RVPNTDASNPSANQSVFKTYENLITALSKPITTSADVTTMQAAVQTAQNNLDNAYQVALQ 243
Query: 378 AAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
A +G+ S+I + +++ + +L D S ++ S Q Q A
Sbjct: 244 AQVTVGTQQSQITTLNSSGSNFGEQLKEQISKLQSVDYTSAISQFSQQQVSLQAAQ 299
>gi|46581352|ref|YP_012160.1| flagellin N-terminal domain-containing protein [Desulfovibrio
vulgaris str. Hildenborough]
gi|46450774|gb|AAS97420.1| bacterial flagellin N-terminal domain protein [Desulfovibrio
vulgaris str. Hildenborough]
gi|311235011|gb|ADP87865.1| flagellin domain protein [Desulfovibrio vulgaris RCH1]
Length = 282
Score = 50.1 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 41/96 (42%)
Query: 43 NAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG 102
+ +++ +++D G L S + S +D + M+ D+++ +K+
Sbjct: 52 DPTAKALSGTLRADAGMLRQASKNVAEAQSIMDTGASAMNSIKDILADMKDIADEVAAGT 111
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ + + L+ ++R I +S+NG + L
Sbjct: 112 MTTANAKPLYKSLRDEMRGIISSTSYNGISLLDGTN 147
>gi|301053276|ref|YP_003791487.1| flagellar hook-associated protein [Bacillus anthracis CI]
gi|300375445|gb|ADK04349.1| flagellar hook-associated protein [Bacillus cereus biovar anthracis
str. CI]
Length = 287
Score = 50.1 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 15/168 (8%), Positives = 55/168 (32%), Gaps = 4/168 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +A A +L D+N + +++V+SG + +++ S + ++ + +
Sbjct: 3 VSTFQNASWAKNQLMDLNVQQQYHRNQVTSGKKNLFMSEDPLAASKSFAIQHSLANIEQM 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ + + + + + ++ + ++ + E+ + +++ I
Sbjct: 63 QKDLADSKNVLTQTENTLQGVLKSVTRTDQLMLQ----ALSEQNGEKELKAIGAEIDQIL 118
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLD 171
+ + + S K G+ +
Sbjct: 119 KQVVYLANTKEQGRYIFGGDSTEKQPFTEDGTYQGGQNDVNWQLNDGY 166
>gi|34485964|gb|AAQ73340.1| flagellin [Borrelia lonestari]
Length = 142
Score = 50.1 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 9/80 (11%), Positives = 27/80 (33%)
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEK 405
++ + ++ I+ I+ T +G+ +R+ + + ++
Sbjct: 63 QGGISSPINVTTAIDANASLTKIEDAIRMVTDQRANLGAFQNRLESVKASADYAIENLKA 122
Query: 406 GVGRLVDADMASESTRLSAL 425
++ DA M E +
Sbjct: 123 SYAQIKDAIMTDEIVASTTN 142
>gi|238752860|ref|ZP_04614325.1| Flagellar hook-associated protein [Yersinia rohdei ATCC 43380]
gi|238708899|gb|EEQ01152.1| Flagellar hook-associated protein [Yersinia rohdei ATCC 43380]
Length = 302
Score = 49.7 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 19/175 (10%), Positives = 59/175 (33%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
A + Q + N E + +++S +V +D+ + ++ + A+ I
Sbjct: 1 MMATAVQQSASNSNAAQEKLSRQINSHRKVIVPSDDPIASTWMAQLEQEQSAIEQYQQNI 60
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSS 127
++ + + ++ + ++ IK+++ + S + S + ++L I +
Sbjct: 61 TRLNNSLSKQEKSVTALKNELTDIKDELLSAASDSRGSLDMASYGNSIGARLETIVTFLN 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
G++T + S + + +V ++
Sbjct: 121 SKSGEGRYIFSGTNTDTSPVSYDATTSEYSYAGNSDYRETTTANGISVRENTHIH 175
>gi|295690746|ref|YP_003594439.1| flagellar hook-associated protein FlgL [Caulobacter segnis ATCC
21756]
gi|295432649|gb|ADG11821.1| flagellar hook-associated protein FlgL [Caulobacter segnis ATCC
21756]
Length = 307
Score = 49.7 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 34/79 (43%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ D K A A GK G R E ++ D + VG +VD DMA TRL +
Sbjct: 223 LPTFDAAYKGAVDAQGKNGVTQKRFESAETDLQNQADTLTSMVGDIVDVDMADAVTRLES 282
Query: 425 LQTQQQLAVQALSIVNNST 443
+ Q + Q S + S+
Sbjct: 283 AKLAVQASAQVFSSLQQSS 301
>gi|237753278|ref|ZP_04583758.1| flagellin [Helicobacter winghamensis ATCC BAA-430]
gi|229375545|gb|EEO25636.1| flagellin [Helicobacter winghamensis ATCC BAA-430]
Length = 251
Score = 49.7 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 5/165 (3%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I + S + L+ + +++S + A + A +IA + + ++S
Sbjct: 3 IGNSQSTNESLISLKKAKDEEKDAIKKLASPRSLE--ATDGASLAIANALLAQANSMSQG 60
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ IA A +S + A I+SE L ++
Sbjct: 61 VRNANDALGVMQIADATLSNITSSAIRMNELSVALGNPALNSDQRAMIESEANALTQSMQ 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT 165
D + FNG+N + T + S+ + V
Sbjct: 121 DATSQAIFNGKNVFGGQMSFVTGNGTASINMQAPNIADLSVNNQQ 165
>gi|2576273|emb|CAA75366.1| flagellin [Borrelia burgdorferi]
gi|2576281|emb|CAA75370.1| flagellin [Borrelia burgdorferi]
Length = 154
Score = 49.7 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 8/86 (9%), Positives = 28/86 (32%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 63 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 122
Query: 394 DFIKLMRDAVEKGVGRLVDADMASES 419
+ + + ++ ++ DA M E
Sbjct: 123 NSTEYAIENLKASYAQIKDATMTDEV 148
>gi|242310433|ref|ZP_04809588.1| flagellar hook-protein FlgL [Helicobacter pullorum MIT 98-5489]
gi|239522831|gb|EEQ62697.1| flagellar hook-protein FlgL [Helicobacter pullorum MIT 98-5489]
Length = 874
Score = 49.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 31/273 (11%), Positives = 70/273 (25%), Gaps = 4/273 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S L + +++ GL++ + + ++ + + L+
Sbjct: 3 IGTNSSYTMMQYYQGKTQAGLNNILAQMN-GLKIQFGYQDTSIFNKTLELDYNITTLTQS 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL---QSQLR 120
+ + +S+ M K+K+ G S + L +
Sbjct: 62 KELANNALTFTKHTDTALSELASSMDNFKSKLVQGANDIHSETSRLAIAQDLKSIRDHFL 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA S + T + + S G+ + ++ Y + + S
Sbjct: 122 SIANTSIGGEFIFGGTATTTKPFNSDGSYNGNNATLNALLSSNNSLAYNITGYELFFGSD 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D + D D ++ T + L G +
Sbjct: 182 NDTNRVISTNIPKFNQSALNPQIMDPDHPTGNSEEVYITAEDTLRDLVGDNDSDPSNNDP 241
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ I A + + +
Sbjct: 242 EVFYITGRRPDGTAFKSKFEMGVAYTDEDQSAT 274
Score = 41.7 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 34/142 (23%), Gaps = 5/142 (3%)
Query: 308 VAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSF 367
+ + I T D ++ +
Sbjct: 734 HPALTFQANNAIVADDPHVNFFQQIDTIIQALEDGTYRPGGTDEYDDSMRNPGIQNALLV 793
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
D A K G+ + + +++ + +D D A + S L
Sbjct: 794 FDHLADHINKAHTKNGAQGNAFEYSIERTEVLIVQAKTLRSDTIDTDFAEAYLQFSTLSL 853
Query: 428 QQQLAVQALSIVNNSTARILSL 449
Q LS + + LSL
Sbjct: 854 NYQA---MLSSIGKVSQ--LSL 870
>gi|119369886|gb|ABL67957.1| flagellin [Borrelia burgdorferi]
Length = 139
Score = 49.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 9/85 (10%), Positives = 27/85 (31%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + + I+ I+ + +G+ +R+ +
Sbjct: 55 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSFAKIENAIRMISDQRANLGAFQNRLESIK 114
Query: 394 DFIKLMRDAVEKGVGRLVDADMASE 418
D + + ++ ++ DA M E
Sbjct: 115 DSTEYAIENLKASYAQIKDATMTDE 139
>gi|187926947|ref|YP_001893292.1| flagellar hook-associated protein 3 [Ralstonia pickettii 12J]
gi|241665276|ref|YP_002983635.1| flagellar hook-associated protein 3 [Ralstonia pickettii 12D]
gi|187728701|gb|ACD29865.1| flagellar hook-associated protein 3 [Ralstonia pickettii 12J]
gi|240867303|gb|ACS64963.1| flagellar hook-associated protein 3 [Ralstonia pickettii 12D]
Length = 319
Score = 49.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 25/257 (9%), Positives = 74/257 (28%), Gaps = 3/257 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T +S +++ NL +Q +++SG+ ++ A DN + + ++ A
Sbjct: 3 VSTAQFFALSSASMQNTQSNLLTLQQQLASGIALNSAGDNPSAFGQMAQLQQTQDANDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+++ + ++ + + K + + + + +++ Q QL
Sbjct: 63 QVNRDATDARLTNVSSALTNLVTTLQQGKQSMVGANTSLMTDSQRIGVLAQVKQQYQQLL 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA +G G++ ++ ++ + + +
Sbjct: 123 SIANQRDPSGVALFGGANGTTDPFVSSGGSVQYVGTGQPPTVQVSQNISMPNSVAGDSVF 182
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
++ + +S + T +T L + +
Sbjct: 183 VRIPNTDPANPSANQSIFKTYENLITALSTPINAATQATDVASLQKAVQTAQGNLDNAYQ 242
Query: 241 QAKGIATIPVPLPAAPA 257
A A
Sbjct: 243 VALQAQVTVGTQQAQIT 259
Score = 37.0 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 18/164 (10%), Positives = 47/164 (28%)
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ + ++ + NS + ++
Sbjct: 139 ANGTTDPFVSSGGSVQYVGTGQPPTVQVSQNISMPNSVAGDSVFVRIPNTDPANPSANQS 198
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRI 389
+ ++ T TD + + A++ +D + A A +G+ ++I
Sbjct: 199 IFKTYENLITALSTPINAATQATDVASLQKAVQTAQGNLDNAYQVALQAQVTVGTQQAQI 258
Query: 390 HLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +++ + +L D S ++ S Q Q A
Sbjct: 259 TTLNSSGSNYGEQLKEQISKLQSVDYTSAISQFSQQQVSLQAAQ 302
>gi|167725937|ref|ZP_02409173.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei
DM98]
Length = 304
Score = 49.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 31/280 (11%), Positives = 72/280 (25%), Gaps = 4/280 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +N +Q R L Q R+++ R+ +D+ ++ + L
Sbjct: 3 ITSNQYHSIMAQVNRQATAGLMDTQIRMATEKRILRPSDDPTGAVRLAMLVQADAMLDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK----ITAGVERGTDSKSIQSEITQLQSQL 119
+ +S++ ++ MS +D + K G D + + ++ L
Sbjct: 63 RATGAMLNSRLQHSERVMSGIVDQLQNEAVKHLGFAMDGSRSPEDLSAYAQVLASVRDTL 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
A +G ++ R D T + +
Sbjct: 123 LQSANTRDSSGNYLFSGTAITTAPIRFDPAAPVGSRYTFEGNLEKQTAVVGDGVTEVANE 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S K+ D + D G + + + A + +T
Sbjct: 183 SLAEMADGLNALDEAIAKMSEPNANPNDPAYRDVLGRATDTIESVLASVNAKIGRMGSTQ 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ + + + G + +
Sbjct: 243 ARLQMLDELHESAQIVGNQAALDVGKISPEEVFTDYQSYM 282
>gi|30721700|gb|AAP34181.1| FliC [Pseudomonas aeruginosa]
Length = 139
Score = 49.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 24/91 (26%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
S + + + + + V ID IK
Sbjct: 49 ADGTTSAVSGVAITDTGSTGAGTAAGTTTFTEANDTVAKIDISTAKGAQSAVLVIDEAIK 108
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVE 404
A +G++ +R + +K + + V
Sbjct: 109 QIDAQRADLGAVQNRFDNTINNLKNIGENVS 139
>gi|11611479|dbj|BAB18944.1| flagellin protein [Borrelia garinii]
gi|11611483|dbj|BAB18946.1| flagellin protein [Borrelia garinii]
Length = 200
Score = 49.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ + + +++ V+ +K D SIQ EI QL ++
Sbjct: 1 RNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINR 60
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 61 IADQAQYNQMHMLSNKSASQNVRTAE 86
>gi|11611521|dbj|BAB18965.1| flagellin protein [Borrelia burgdorferi]
gi|11611523|dbj|BAB18966.1| flagellin protein [Borrelia burgdorferi]
gi|11611525|dbj|BAB18967.1| flagellin protein [Borrelia burgdorferi]
gi|11907496|dbj|BAB19647.1| flagellin protein [Borrelia burgdorferi]
Length = 200
Score = 49.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ + + +++ V+ +K D SIQ EI QL ++
Sbjct: 1 RNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINR 60
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 61 IADQAQYNQMHMLSNKSASQNVRTAE 86
>gi|30348362|dbj|BAC76091.1| flagellin [Borrelia turcica]
gi|30348368|dbj|BAC76094.1| flagellin [Borrelia turcica]
gi|51870745|dbj|BAC76096.2| flagellin [Borrelia turcica]
Length = 198
Score = 49.4 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDI 122
+ + + +++ V+ +K D SIQ EI QL ++ I
Sbjct: 1 NTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRI 60
Query: 123 ARGSSFNGENWLRTDLGSSTASIAK 147
A S +N + L + A+
Sbjct: 61 ADQSQYNQMHMLSNKSAAQNVKTAE 85
>gi|260768774|ref|ZP_05877708.1| flagellar hook-associated protein FlgL [Vibrio furnissii CIP
102972]
gi|260616804|gb|EEX41989.1| flagellar hook-associated protein FlgL [Vibrio furnissii CIP
102972]
gi|315180477|gb|ADT87391.1| flagellar hook-associated protein [Vibrio furnissii NCTC 11218]
Length = 296
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 41/101 (40%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ + D N ++ V +++++G +++ +D+ Q ++ + I S
Sbjct: 14 RAMMDNNVSINKVAEQIATGNKINHLSDDPIASYKLQGLEKTIASALQSQKNIASVQSGY 73
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL 115
+ M+ DV + + + D +++ +T+L
Sbjct: 74 AQYETYMTSFNDVAMDVSDLLLQAQNSTLDPEAMAGIVTEL 114
>gi|116246272|ref|XP_001230409.1| Anopheles gambiae str. PEST AGAP012840-PA [Anopheles gambiae str.
PEST]
gi|116133294|gb|EAU77936.1| AGAP012840-PA [Anopheles gambiae str. PEST]
Length = 208
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 41 ADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE 100
+DNAA + IAQ M+ + SAV+D + + V +++ I V+++++N +T
Sbjct: 43 SDNAAAYGIAQQMQGNVSGQSAVNDGLSFAAQTVSSTSTAVNQIISVLNSVQNAVTTLGN 102
Query: 101 RGTDSKSIQSEITQ---LQSQLRDIARGSSFNGENWLRTDLGSSTASIAK 147
++ TQ L Q+ IAR ++FNG N + A
Sbjct: 103 NQGSPAALDQIGTQITGLLQQIDTIARNATFNGVNLIAGSTTDGLGITAN 152
>gi|167576669|ref|ZP_02369543.1| flagellar hook-associated protein FlgL [Burkholderia thailandensis
TXDOH]
Length = 304
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 27/280 (9%), Positives = 72/280 (25%), Gaps = 4/280 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +N +Q R L Q R+++ R+ +D+ ++ + L
Sbjct: 3 ITSNQYHSIMAQVNRQATAGLMDTQIRMATEKRILRPSDDPTGAVRLALLVQADATLDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMS----TIKNKITAGVERGTDSKSIQSEITQLQSQL 119
+ ++++ ++ MS +D + G D + + ++ L
Sbjct: 63 RATGAMLNNRLQHSERVMSGIVDQLQNEAVKHLGLAMDGSRSPEDLSAYAQVLASVRDTL 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
A +G ++ + R D T + +
Sbjct: 123 LQSANARDSSGNYLFSGTAITTAPIRFDPAAPAGSRYTFEGNLEKQTAVVGDGVTEVAND 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ K+ D + D G ++ + + A + +
Sbjct: 183 NLAEMADALNALDEAIAKMSEPDANPNDPAYRDVLGRVTDTIESVLASVNAKIGQMGSAQ 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ + + + G + +
Sbjct: 243 ARLQMLDELHESAQIVGNQAALDVGKISPEEVFTDYQSYM 282
>gi|11611487|dbj|BAB18948.1| flagellin protein [Borrelia garinii]
Length = 200
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ + + +++ V+ +K D SIQ EI QL ++
Sbjct: 1 RNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINR 60
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 61 IADQAQYNQMHMLSNKSASQNVRTAE 86
>gi|11611489|dbj|BAB18949.1| flagellin protein [Borrelia garinii]
Length = 200
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ + + +++ V+ +K D SIQ EI QL ++
Sbjct: 1 RNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINR 60
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 61 IADQAQYNQMHMLSNKSASQNVRTAE 86
>gi|254182887|ref|ZP_04889480.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei
1655]
gi|184213421|gb|EDU10464.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei
1655]
Length = 304
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 31/280 (11%), Positives = 72/280 (25%), Gaps = 4/280 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +N +Q R L Q R+++ R+ +D+ ++ + L
Sbjct: 3 ITSNQYHSIMAQVNRQATAGLMDTQIRMATEKRILRPSDDPTGAVRLAMLVRADAMLDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK----ITAGVERGTDSKSIQSEITQLQSQL 119
+ +S++ ++ MS +D + K G D + + ++ L
Sbjct: 63 RATGAMLNSRLQHSERVMSGIVDQLQNEAVKHLGFAMDGSRSPEDLSAYAQVLASVRDTL 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
A +G ++ R D T + +
Sbjct: 123 LQSANTRDSSGNYLFSGTAITTAPIRFDPAAPVGSRYTFEGNLEKQTAVVGDGVTEVANE 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S K+ D + D G + + + A + +T
Sbjct: 183 SLAEMADGLNALDEAIAKMSEPNANPNDPAYRDVLGRATDTIESVLASVNAKIGRMGSTQ 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ + + + G + +
Sbjct: 243 ARLQMLDELHESAQIVGNQAALDVGKISPEEVFTDYQSYM 282
>gi|254299679|ref|ZP_04967128.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei
406e]
gi|157809563|gb|EDO86733.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei
406e]
Length = 304
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 31/280 (11%), Positives = 72/280 (25%), Gaps = 4/280 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +N +Q R L Q R+++ R+ +D+ ++ + L
Sbjct: 3 ITSNQYHSIMAQVNRQATAGLMDTQIRMATEKRILRPSDDPTGAVRLAMLVQADAILDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK----ITAGVERGTDSKSIQSEITQLQSQL 119
+ +S++ ++ MS +D + K G D + + ++ L
Sbjct: 63 RATGAMLNSRLQHSERVMSGIVDQLQNEAVKHLGFAMDGSRSPEDLSAYAQVLASVRDTL 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
A +G ++ R D T + +
Sbjct: 123 LQSANTRDSSGNYLFSGTAITTAPIRFDPAAPVGSRYTFEGNLEKQTAVVGDGVTEVANE 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S K+ D + D G + + + A + +T
Sbjct: 183 SLAEMADGLNALDEAIAKMSEPNANPNDPAYRDVLGRATDTIESVLASVNAKIGRMGSTQ 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ + + + G + +
Sbjct: 243 ARLQMLDELHESAQIVGNQAALDVGKISPEEVFTDYQSYM 282
>gi|120601470|ref|YP_965870.1| flagellin domain-containing protein [Desulfovibrio vulgaris DP4]
gi|120561699|gb|ABM27443.1| flagellin domain protein [Desulfovibrio vulgaris DP4]
Length = 282
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 40/96 (41%)
Query: 43 NAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG 102
+ +++ +++D G L S + S +D + M+ +++ +K+
Sbjct: 52 DPTAKALSGTLRADAGMLRQASKNVAEAQSIMDTGASAMNSIKGILADMKDIADEVAAGT 111
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDL 138
+ + + L+ ++R I +S+NG + L
Sbjct: 112 MTTANAKPLYKSLRDEMRGIISSTSYNGISLLDGTN 147
>gi|315175283|gb|ADT82857.1| flagellin [Borrelia sp. TKM-1]
gi|315175327|gb|ADT82879.1| flagellin [Borrelia sp. THL-14]
Length = 200
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ + + +++ V+ +K D SIQ EI QL ++
Sbjct: 1 RNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINR 60
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 61 IADQAQYNQMHMLSNKSAAQNVKTAE 86
>gi|13365507|dbj|BAA90304.2| flagellin [Borrelia sp. KR1]
gi|13365511|dbj|BAA90306.2| flagellin [Borrelia sp. TM1]
gi|23200535|dbj|BAC16338.1| flagellin [Borrelia valaisiana]
gi|23200543|dbj|BAC16342.1| flagellin [Borrelia valaisiana]
gi|23200545|dbj|BAC16343.1| flagellin [Borrelia valaisiana]
gi|23200547|dbj|BAC16344.1| flagellin [Borrelia valaisiana]
gi|23200549|dbj|BAC16345.1| flagellin [Borrelia valaisiana]
gi|23200551|dbj|BAC16346.1| flagellin [Borrelia valaisiana]
gi|23200553|dbj|BAC16347.1| flagellin [Borrelia valaisiana]
gi|315175281|gb|ADT82856.1| flagellin [Borrelia sp. 404m]
gi|315175285|gb|ADT82858.1| flagellin [Borrelia sp. TKM-2]
gi|315175287|gb|ADT82859.1| flagellin [Borrelia sp. TKM-3]
gi|315175289|gb|ADT82860.1| flagellin [Borrelia sp. TKM-4]
gi|315175291|gb|ADT82861.1| flagellin [Borrelia sp. TKM-6]
gi|315175293|gb|ADT82862.1| flagellin [Borrelia sp. TKM-7]
gi|315175297|gb|ADT82864.1| flagellin [Borrelia sp. TKM-29]
gi|315175299|gb|ADT82865.1| flagellin [Borrelia sp. TKM-30]
gi|315175301|gb|ADT82866.1| flagellin [Borrelia sp. TKM-36]
gi|315175305|gb|ADT82868.1| flagellin [Borrelia sp. TLC-22]
gi|315175307|gb|ADT82869.1| flagellin [Borrelia sp. TLC-26]
gi|315175311|gb|ADT82871.1| flagellin [Borrelia sp. TLC-42]
gi|315175313|gb|ADT82872.1| flagellin [Borrelia sp. TTT-1]
gi|315175315|gb|ADT82873.1| flagellin [Borrelia sp. TTT-3]
gi|315175319|gb|ADT82875.1| flagellin [Borrelia sp. THL-7]
gi|315175323|gb|ADT82877.1| flagellin [Borrelia sp. THL-10]
Length = 200
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ + + +++ V+ +K D SIQ EI QL ++
Sbjct: 1 RNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINR 60
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 61 IADQAQYNQMHMLSNKSAAQNVKTAE 86
>gi|226225743|ref|YP_002759849.1| flagellar hook-associated protein 3 [Gemmatimonas aurantiaca T-27]
gi|226088934|dbj|BAH37379.1| flagellar hook-associated protein 3 [Gemmatimonas aurantiaca T-27]
Length = 302
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 46/127 (36%), Gaps = 7/127 (5%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
SI+T +S + L+ I+ + +S+G+ + +DNA + S AL+
Sbjct: 6 SIITANSKLRLQTGLQGIDRLRDD----ISTGVTIRKISDNATSGGEIVRIGSSMRALTQ 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI---TAGVERGTDSKSIQSEITQLQSQL 119
G ++ + +++ + ++ +++E+ QL +
Sbjct: 62 FKRNTDSGIARAQAEEGVLNQLTNTVTRASEIALTQIGTTATAQSRLVVKAEVDQLLNLA 121
Query: 120 RDIARGS 126
+
Sbjct: 122 SSLGNTR 128
Score = 46.7 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 6/92 (6%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
N+ A++ + ++T G G+ + + + + M ++ L D +
Sbjct: 209 DNDTAAIQAATARLNTATSNVQTLIGAQGARVNEMEDAKVNLATMEMNLKMFRSDLRDTE 268
Query: 415 MASESTRLSALQTQQQLAVQA------LSIVN 440
+ L QT Q A+ A LS+ N
Sbjct: 269 IDQAMVELVGKQTLYQAAMSATSRILGLSLAN 300
>gi|13365513|dbj|BAA90307.2| flagellin [Borrelia sp. TA1]
gi|23200525|dbj|BAC16333.1| flagellin [Borrelia valaisiana]
gi|23200527|dbj|BAC16334.1| flagellin [Borrelia valaisiana]
gi|23200529|dbj|BAC16335.1| flagellin [Borrelia valaisiana]
gi|23200531|dbj|BAC16336.1| flagellin [Borrelia valaisiana]
gi|23200533|dbj|BAC16337.1| flagellin [Borrelia valaisiana]
gi|23200541|dbj|BAC16341.1| flagellin [Borrelia valaisiana]
gi|315175303|gb|ADT82867.1| flagellin [Borrelia sp. TKM-40]
gi|315175317|gb|ADT82874.1| flagellin [Borrelia sp. THL-6]
gi|315175321|gb|ADT82876.1| flagellin [Borrelia sp. THL-8]
gi|315175325|gb|ADT82878.1| flagellin [Borrelia sp. THL-11]
Length = 200
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ + + +++ V+ +K D SIQ EI QL ++
Sbjct: 1 RNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINR 60
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 61 IADQAQYNQMHMLSNKSAAQNVKTAE 86
>gi|13365509|dbj|BAA90305.2| flagellin [Borrelia sp. KR3]
gi|23200537|dbj|BAC16339.1| flagellin [Borrelia valaisiana]
gi|23200539|dbj|BAC16340.1| flagellin [Borrelia valaisiana]
gi|315175295|gb|ADT82863.1| flagellin [Borrelia sp. TKM-14]
gi|315175309|gb|ADT82870.1| flagellin [Borrelia sp. TLC-27]
Length = 200
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ + + +++ V+ +K D SIQ EI QL ++
Sbjct: 1 RNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINR 60
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 61 IADQAQYNQMHMLSNKSAAQNVKTAE 86
>gi|11611507|dbj|BAB18958.1| flagellin protein [Borrelia garinii]
gi|11611529|dbj|BAB18969.1| flagellin protein [Borrelia garinii]
Length = 200
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ + + +++ V+ +K D SIQ EI QL ++
Sbjct: 1 RNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINR 60
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 61 IADQAQYNQMHMLSNKSASQNVKTAE 86
>gi|109947146|ref|YP_664374.1| flagellar hook-associated protein FlgL [Helicobacter acinonychis
str. Sheeba]
gi|109714367|emb|CAJ99375.1| flagellar hook-associated protein FlgL [Helicobacter acinonychis
str. Sheeba]
Length = 827
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 20/170 (11%), Positives = 53/170 (31%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L+ D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLNQGIDVAQNAYTATLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M T K K+ T +I +++ +L+ + +IA S +
Sbjct: 77 DKALQEFSKTMETFKTKLIQSANDVHSETSRTAIANDLERLREHMINIANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L D
Sbjct: 137 GSKVDRPPIDSEGKYHGNGEDLNALVSSDNLVPYNISGQDLFLGIDKDKH 186
>gi|313672182|ref|YP_004050293.1| hypothetical protein Calni_0217 [Calditerrivibrio nitroreducens DSM
19672]
gi|312938938|gb|ADR18130.1| hypothetical protein Calni_0217 [Calditerrivibrio nitroreducens DSM
19672]
Length = 1141
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 17/145 (11%), Positives = 47/145 (32%), Gaps = 4/145 (2%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N ++ L + + D+V+ G + + + +++ A ++ S
Sbjct: 6 NMLSLKYLNNLGNSLEKVTNANDKVTKGRNLINPETDVVFYASAINVQRTIDEGQQFSRN 65
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIK-NKITAGVERGTD---SKSIQSEITQLQSQLRDI 122
S + + +A D++ K AG + K++ ++ + L D+
Sbjct: 66 AENAISWLSNYDNELQRAFDIIRNAKSEYAVAGANDSQNATSRKALAGDVANMLQSLIDV 125
Query: 123 ARGSSFNGENWLRTDLGSSTASIAK 147
+ F + + +
Sbjct: 126 GNANYFGRYFFAGYKTDTKPFAADS 150
>gi|167905096|ref|ZP_02492301.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei
NCTC 13177]
Length = 304
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 31/280 (11%), Positives = 72/280 (25%), Gaps = 4/280 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +N +Q R L Q R+++ R+ +D+ ++ + L
Sbjct: 3 ITSNQYHSIMTQVNRQATAGLMDTQIRMATEKRILRPSDDPTGAVRLAMLVQADAMLDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK----ITAGVERGTDSKSIQSEITQLQSQL 119
+ +S++ ++ MS +D + K G D + + ++ L
Sbjct: 63 RATGAMLNSRLQHSERVMSGIVDQLQNEAVKHLGFAMDGSRSPEDLSAYAQVLASVRDTL 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
A +G ++ R D T + +
Sbjct: 123 LQSANTRDSSGNYLFSGTAITTAPIRFDPAAPVGSRYTFEGNLEKQTAVVGDGVTEVANE 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S K+ D + D G + + + A + +T
Sbjct: 183 SLAEMADGLNALDEAIAKMSEPNANPNDPAYRDVLGRATDTIESVLASVNAKIGRMGSTQ 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ + + + G + +
Sbjct: 243 ARLQMLDELHESAQIVGNQAALDVGKISPEEVFTDYQSYM 282
>gi|1518047|gb|AAB62741.1| FlgL protein [Borrelia burgdorferi]
Length = 425
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 41/401 (10%), Positives = 99/401 (24%), Gaps = 28/401 (6%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G R+ ++ + A + +D L+ + L + +DI K S ++ K
Sbjct: 36 GKRIVKLRNDPTGVTHAIRLDNDIFKLNVYIKILTLLKATLDIRKDIYSLLQIFLTRAKE 95
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
G +S + ++ + L D+ ++ G + G+ S A V
Sbjct: 96 IAIQGASGTYESDDKKMISKEVNALLEDVVAIANAKGPDGYSIFSGTKIDSEAFKVTREN 155
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
K ++ + T+
Sbjct: 156 KISKTSKDGAGPQIIKVEYNGNQAEKKTEVYNDIH------------------------- 190
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
+ + ++ + + + +
Sbjct: 191 --MSNNYPGNVIFFLQNQNIISSINTNGFAVKENTKIYIDNIEIGLTAGDTALDIVAKIN 248
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+SA + + + + + T L
Sbjct: 249 ESSAPVEASIDPVLNSSSIKTTTPHQIWITEEKESNVLQTLGILTKNNDTKLPPYNLSSS 308
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA-GKIGSISSRIHLQ 392
S+ I E+L ++ ID +K T +R+
Sbjct: 309 TEVRSRSIFDALIELRDTLYNNKEELVGSRSLAEIDESLKKITYIRCRSWSKKKNRLDRS 368
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ I +++ + + D D+ T L+ Q+++
Sbjct: 369 YERISKEAADMKEDMIQYTDLDVTKAITNLNMASLAYQVSI 409
>gi|30348364|dbj|BAC76092.1| flagellin [Borrelia turcica]
gi|30348366|dbj|BAC76093.1| flagellin [Borrelia turcica]
gi|30348370|dbj|BAC76095.1| flagellin [Borrelia turcica]
Length = 198
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDI 122
+ + + +++ V+ +K D SIQ EI QL ++ I
Sbjct: 1 NTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRI 60
Query: 123 ARGSSFNGENWLRTDLGSSTASIAK 147
A S +N + L + A+
Sbjct: 61 ADQSQYNQMHMLSNKSAAQNVKTAE 85
>gi|11611481|dbj|BAB18945.1| flagellin protein [Borrelia garinii]
gi|11611485|dbj|BAB18947.1| flagellin protein [Borrelia garinii]
gi|11611493|dbj|BAB18951.1| flagellin protein [Borrelia garinii]
gi|11611495|dbj|BAB18952.1| flagellin protein [Borrelia garinii]
gi|11611497|dbj|BAB18953.1| flagellin protein [Borrelia garinii]
gi|11611499|dbj|BAB18954.1| flagellin protein [Borrelia garinii]
gi|11611501|dbj|BAB18955.1| flagellin protein [Borrelia garinii]
gi|11611503|dbj|BAB18956.1| flagellin protein [Borrelia garinii]
gi|11611505|dbj|BAB18957.1| flagellin protein [Borrelia garinii]
gi|11611511|dbj|BAB18960.1| flagellin protein [Borrelia garinii]
gi|11611531|dbj|BAB18970.1| flagellin protein [Borrelia garinii]
Length = 200
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ + + +++ V+ +K D SIQ EI QL ++
Sbjct: 1 RNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINR 60
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 61 IADQAQYNQMHMLSNKSASQNVRTAE 86
>gi|11611513|dbj|BAB18961.1| flagellin protein [Borrelia garinii]
Length = 200
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ + + +++ V+ +K D SIQ EI QL ++
Sbjct: 1 RNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINR 60
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 61 IADQAQYNQMHMLSNKSASQNVRTAE 86
>gi|23263377|dbj|BAC16526.1| flagellin [Borrelia afzelii]
gi|23263381|dbj|BAC16528.1| flagellin [Borrelia afzelii]
gi|46917420|dbj|BAD18059.1| flagellin protein [Borrelia afzelii]
gi|46917423|dbj|BAD18060.1| flagellin protein [Borrelia afzelii]
gi|47115500|dbj|BAD18891.1| FlaB [Borrelia afzelii]
gi|47115502|dbj|BAD18892.1| FlaB [Borrelia afzelii]
Length = 199
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDI 122
+ + + +++ V+ +K D SIQ EI QL ++ I
Sbjct: 1 NTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRI 60
Query: 123 ARGSSFNGENWLRTDLGSSTASIAK 147
A + +N + L S A+
Sbjct: 61 ADQAQYNQMHMLSNKSASQNVKTAE 85
>gi|23263383|dbj|BAC16529.1| flagellin [Borrelia lusitaniae]
gi|23263385|dbj|BAC16530.1| flagellin [Borrelia lusitaniae]
gi|23263387|dbj|BAC16531.1| flagellin [Borrelia lusitaniae]
gi|23263389|dbj|BAC16532.1| flagellin [Borrelia lusitaniae]
Length = 199
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDI 122
+ + + +++ V+ +K D SIQ EI QL ++ I
Sbjct: 1 NTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRI 60
Query: 123 ARGSSFNGENWLRTDLGSSTASIAK 147
A + +N + L S A+
Sbjct: 61 ADQAQYNQMHMLSNKSASQNVRTAE 85
>gi|86157769|ref|YP_464554.1| flagellar hook-associated protein FlgL [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85774280|gb|ABC81117.1| flagellar hook-associated protein FlgL [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 294
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 39/109 (35%), Gaps = 3/109 (2%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
A+++ L+ + SSG+RV D+ A + + + A++ A G S
Sbjct: 11 RAAREGGQARARLDRAVAQASSGVRVVHPGDDPAAAARIAAERVTVARMDAIATATGRAS 70
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQS 117
++ A + + ++ + T S E+ + +
Sbjct: 71 DELAAVDAALGEVATGLARAQELATRYASAPYDAAQRASGAREVRGILA 119
>gi|11611509|dbj|BAB18959.1| flagellin protein [Borrelia garinii]
Length = 200
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ + + +++ V+ +K D SIQ EI QL ++
Sbjct: 1 RNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINR 60
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 61 IADQAQYNQMHMLSNKSASQNVRTAE 86
>gi|311105942|ref|YP_003978795.1| flagellar hook-associated protein 3 [Achromobacter xylosoxidans A8]
gi|310760631|gb|ADP16080.1| flagellar hook-associated protein 3 [Achromobacter xylosoxidans A8]
Length = 415
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 43/434 (9%), Positives = 105/434 (24%), Gaps = 36/434 (8%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T+ + + + ++ + ++V SG + AD+ ++A + +
Sbjct: 3 LSTSMMYSNGLKGVLSQESDMNRLVEQVGSGRKNLTPADDPLAAALAISVAQTQSMNNTY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE--RGTDSKSIQSEITQLQSQLRD 121
S+ + ++ + + + +I +D +++ + + + L
Sbjct: 63 GMNRQTASTNLGQESNTLTAVTNALQEARTRIIQAGGVLSDSDRQTLSTALKSTREALLG 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+A + NG+ + GS + + G+ I + L
Sbjct: 123 LANTTDGNGQYLFSGNDGSVIPYSKDAAGKIAYSNSVGERTIQVDQSRQLSSSDLGKDIF 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ SV S K T A
Sbjct: 183 GRANPGSQAFVASAANSNTGTAEFGSPSVTPGSANTGMKFAVQFETDAATGAIGYRVTTT 242
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ VP +PA T S + + G+
Sbjct: 243 NPDGTSATVPAVGSPATAYTDGAAINLGSGVSVSIKGAPQAGDV---------------- 286
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ ++ S + A+
Sbjct: 287 ------------------IKVDSVQSSNMDVFATLDDVIAALDAPSAGDPVATAKLNNAL 328
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
+ +G+ + + + K + L + D +++
Sbjct: 329 ATANKKLANTYDNVLTVQASVGARMNELDALSATGTQKGLSYSKSLSDLEELDYYQGASQ 388
Query: 422 LSALQTQQQLAVQA 435
L+ Q Q A A
Sbjct: 389 LALRQVALQAASAA 402
>gi|217033413|ref|ZP_03438843.1| hypothetical protein HP9810_1g27 [Helicobacter pylori 98-10]
gi|216944118|gb|EEC23546.1| hypothetical protein HP9810_1g27 [Helicobacter pylori 98-10]
Length = 826
Score = 49.0 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 17/170 (10%), Positives = 52/170 (30%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ ++ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQDSNINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M T K K+ +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMETFKTKLIQSANDMHSETSRAAIANDLERLREHMMNVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSEGKYHGNGEDLNALISSDNLVPYNISGQDLFLGTDKDKH 186
>gi|224418230|ref|ZP_03656236.1| flagellar hook-associated protein FlgL [Helicobacter canadensis MIT
98-5491]
gi|253827555|ref|ZP_04870440.1| flagellar hook-associated protein [Helicobacter canadensis MIT
98-5491]
gi|313141763|ref|ZP_07803956.1| flagellar hook-protein FlgL [Helicobacter canadensis MIT 98-5491]
gi|253510961|gb|EES89620.1| flagellar hook-associated protein [Helicobacter canadensis MIT
98-5491]
gi|313130794|gb|EFR48411.1| flagellar hook-protein FlgL [Helicobacter canadensis MIT 98-5491]
Length = 874
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 32/271 (11%), Positives = 75/271 (27%), Gaps = 4/271 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN S L + +++ GL++ +++ ++ + + L+
Sbjct: 3 IGTNSSYTMLQYYQGRTQNGLNGILAQMN-GLKIQYGYQDSSIFNKTLELDYNLTTLTQS 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLR 120
+ + +S+ + M K+K+ G T +I ++ L+
Sbjct: 62 KELANNALTFTRHTDTALSELVKNMDNFKSKLVQGANDIHSETSRLAIAQDLQSLRDHFL 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
IA S + T S + S G+ + ++ Y + + S
Sbjct: 122 SIANTSIGGEFIFAGTATTSKPFNSDGSYNGNNATLNALLSSSNSVTYNITGYELFFGSD 181
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
D + D + ++ T + L G +
Sbjct: 182 NDTNRIISTNVPKFNQSALNPQIMDPNHPTGNSEEVYITAEDTLRDLVGDNDSDPSNNGP 241
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
+ I A + + +
Sbjct: 242 EVFYITGRRPDGTAFKSKFSMEVAYNDKDQA 272
Score = 45.1 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 40/409 (9%), Positives = 87/409 (21%), Gaps = 17/409 (4%)
Query: 49 IAQIMKSDNGALSAVSDAIG-LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKS 107
I S + + G S + + A + ++ + D
Sbjct: 471 IIDNNVSQKTPPDQSQNNLPYTGESSLSLTITAQDNAGNNVNGFR----NDYSVEYDRVG 526
Query: 108 IQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTID 167
E + L S + I R ++ + S + +
Sbjct: 527 FSKEGSTLSSNVSQIVRDTNEYATMSTKLSEVSGVGLDGHIYNFEVKDVNGTPISGRIEF 586
Query: 168 YYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
++ +T + D + D
Sbjct: 587 SDTGTNMIIETPATINGVNIANIPIPILNPNGNPPQVAGDATPADEVTYQQLADTLGIVM 646
Query: 228 SGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDI 287
+ + A+ +G A P ++ + ++ ++ N+
Sbjct: 647 NLSNSSQADLQNIFVQGGADFNNPDVKLSYETLISNAKNNVSISLDSSGQMQLKDLNNSP 706
Query: 288 WVRATTKNSITSDPG-------YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
S + + I
Sbjct: 707 TRMEFMLYDNQSSNFALDANGRVNTTGHPALTFQANNAIIADDPHVDFFKQIDTIIQALE 766
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
T D ++ + D A K G+ + + + +
Sbjct: 767 DGTYRPGGSNEYDDSMRNPGIQNALLVFDHLADHVNKAHTKNGAQGNSFEYSIERTESLI 826
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
V+ +D D A + S L Q LS + + LSL
Sbjct: 827 VQVKTLRSETIDTDFAEAYLQFSTLSLNYQA---MLSSIGKISQ--LSL 870
>gi|11611527|dbj|BAB18968.1| flagellin protein [Borrelia garinii]
Length = 200
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ + + +++ V+ +K D SIQ EI QL ++
Sbjct: 1 RNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINR 60
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 61 IADQAQYNQMHMLSNKSASQNVRTAE 86
>gi|332528914|ref|ZP_08404883.1| flagellin-like protein [Hylemonella gracilis ATCC 19624]
gi|332041635|gb|EGI77992.1| flagellin-like protein [Hylemonella gracilis ATCC 19624]
Length = 49
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWS 48
I TN +++SA + + L R+SSGLR++ A D+AA +
Sbjct: 3 AVINTNINSLSAQRYQGISDKALSTAIQRLSSGLRINSAKDDAAGLA 49
>gi|300722674|ref|YP_003711964.1| flagellar hook-filament junction protein [Xenorhabdus nematophila
ATCC 19061]
gi|297629181|emb|CBJ89777.1| flagellar biosynthesis; hook-filament junction protein [Xenorhabdus
nematophila ATCC 19061]
Length = 322
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 49/150 (32%), Gaps = 2/150 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN + +++SSG RV + +D+ S ++
Sbjct: 3 VSTNQLYTQKMNGVFSAQSKWMKSGEQLSSGRRVINPSDDPLAASQNIMVSQSESKNQQF 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE--RGTDSKSIQSEITQLQSQLRD 121
+ A + + + S ++V + + + A + D +S ++ + QL +
Sbjct: 63 ATARIFAKNAMSAQLSITSSMVEVTNNVFETLVAAADEQSDQDRESYAQQLDGFKQQLLN 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIG 151
+ + NG +A G
Sbjct: 123 LGNKTDGNGRYIFAGYKTDKPPFVADKNSG 152
>gi|83716911|ref|YP_438396.1| flagellar hook-associated protein FlgL [Burkholderia thailandensis
E264]
gi|167614844|ref|ZP_02383479.1| flagellar hook-associated protein FlgL [Burkholderia thailandensis
Bt4]
gi|257141429|ref|ZP_05589691.1| flagellar hook-associated protein FlgL [Burkholderia thailandensis
E264]
gi|83650736|gb|ABC34800.1| flagellar hook-associated protein 3, putative [Burkholderia
thailandensis E264]
Length = 304
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/280 (9%), Positives = 72/280 (25%), Gaps = 4/280 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +N +Q R L Q R+++ R+ +D+ ++ + L
Sbjct: 3 ITSNQYHSIMAQVNRQATAGLMDTQIRMATEKRILRPSDDPTGAVRLALLVQADATLDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMS----TIKNKITAGVERGTDSKSIQSEITQLQSQL 119
+ ++++ ++ MS +D + G D + + ++ L
Sbjct: 63 RATGAMLNNRLQHSERVMSGIVDQLQNEAVKHLGLAMDGSRSPEDLSAYAQVLASVRDTL 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
A +G ++ + R D T + +
Sbjct: 123 LQSANARDSSGNYLFSGTAITTAPIRFDQAAPAGSRYTFEGNLEKQTAVVGDGVTEVAND 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
+ K+ D + D G ++ + + A + +
Sbjct: 183 NLAEMADALNALDEAIAKMSEPDANPNDPAYRDVLGRVTDTIESVLASVNAKIGQMGSAQ 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ + + + G + +
Sbjct: 243 ARLQMLDELHESAQIVGNQAALDVGKISPEEVFTDYQSYM 282
>gi|238751768|ref|ZP_04613256.1| Flagellar hook-associated protein 3 [Yersinia rohdei ATCC 43380]
gi|238710039|gb|EEQ02269.1| Flagellar hook-associated protein 3 [Yersinia rohdei ATCC 43380]
Length = 320
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 24/198 (12%), Positives = 55/198 (27%), Gaps = 6/198 (3%)
Query: 11 MSASQKLRDINYNLE---VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q ++ I ++++G RV + +D+ S A ++ S + A
Sbjct: 1 MIYQQTMQGITNAQSLWMQSGQQIATGKRVVNPSDDPMAASQAVMVSQSEAENSQYTLAR 60
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNK---ITAGVERGTDSKSIQSEITQLQSQLRDIAR 124
+ +S+A + +I++ D S+ +++ L+ QL + A
Sbjct: 61 SYARQSSSLETTVLSQATTTIQSIQSLIIGAAKDSLSDDDRASMATQLQGLKDQLLNQAN 120
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ NG + + + + D
Sbjct: 121 STDGNGRYMFGGFKSGTAPFAVSATGAVTYVGGDVAITQKVDTNRSMTVGHTGDDIFMKL 180
Query: 185 ERYGLLDRNHKIKVEPQV 202
+ N
Sbjct: 181 TSNAKPEPNDANGNAVAS 198
>gi|11611491|dbj|BAB18950.1| flagellin protein [Borrelia garinii]
Length = 200
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ + + +++ V+ +K D SIQ EI QL ++
Sbjct: 1 RNTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINR 60
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L S A+
Sbjct: 61 IADQAQYNQMHMLSNKSASQNVRTAE 86
>gi|238755318|ref|ZP_04616661.1| Flagellar hook-associated protein 3 [Yersinia ruckeri ATCC 29473]
gi|238706454|gb|EEP98828.1| Flagellar hook-associated protein 3 [Yersinia ruckeri ATCC 29473]
Length = 322
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 29/207 (14%), Positives = 61/207 (29%), Gaps = 6/207 (2%)
Query: 11 MSASQKLRDINYNLE---VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q +R I +++S+G RV + +D+ S A ++ S A
Sbjct: 1 MLYQQNMRGIIDAQSLWLHSGEQLSAGKRVINPSDDPMAASQAVMVSQAESENSQYGLAR 60
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIAR 124
+ +S+ + I+ + + + D S +++ L+ QL + A
Sbjct: 61 SYARQSSSLETTVLSQVTSTVQQIQTLVISASKDSLSDDDRASYATQLQGLKDQLLNQAN 120
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ NG + +A V G+ Q +D S +
Sbjct: 121 STDGNGRYMFAGFKNDTIPFVADPVTGAVTYKGGDVAQTQQVDSSRSMAVGHTGSGVFTS 180
Query: 185 ERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ ++
Sbjct: 181 LTANSRPEPTDPVTGATPASESNIFNT 207
Score = 37.4 bits (84), Expect = 4.7, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 26/73 (35%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ +D + + +IG+ + + ++ + LVD D + +
Sbjct: 238 IRGLDNSLNNMLSVQAEIGTQLQELDSLDSLGSDRTLVNKQRLSDLVDVDWNAAISSYVM 297
Query: 425 LQTQQQLAVQALS 437
Q Q + ++ S
Sbjct: 298 QQAALQASYKSFS 310
>gi|317177111|dbj|BAJ54900.1| flagellar hook-associated protein FlgL [Helicobacter pylori F16]
Length = 826
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/170 (11%), Positives = 53/170 (31%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSGINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M T K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMETFKTKLIQSANDVHSETSRTAIANDLERLREHMMNVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSEGKYHGNGEDLNALISSDNLVPYNISGQDLFLGADKDKH 186
>gi|134280688|ref|ZP_01767398.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 305]
gi|125657225|gb|ABN48713.1| flagellin and related hook-associated protein [Burkholderia
pseudomallei]
gi|134247710|gb|EBA47794.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 305]
Length = 304
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 31/280 (11%), Positives = 72/280 (25%), Gaps = 4/280 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +N +Q R L Q R+++ R+ +D+ ++ + L
Sbjct: 3 ITSNQYHSIMTQVNRQATAGLMDTQIRMATEKRILRPSDDPTGAVRLAMLVRADAMLDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK----ITAGVERGTDSKSIQSEITQLQSQL 119
+ +S++ ++ MS +D + K G D + + ++ L
Sbjct: 63 RATGAMLNSRLQHSERVMSGIVDQLQNEAVKHLGFAMDGSRSPEDLSAYAQVLASVRDTL 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
A +G ++ R D T + +
Sbjct: 123 LQSANTRDSSGNYLFSGTAITTAPIRFDPAAPVGSRYTFEGNLEKQTAVVGDGVTEVANE 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S K+ D + D G + + + A + +T
Sbjct: 183 SLAEMADGLNALDEAIAKMSEPNANPNDPAYRDVLGRATDTIESVLASVNAKIGRMGSTQ 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ + + + G + +
Sbjct: 243 ARLQMLDELHESAQIVGNQAALDVGKISPEEVFTDYQSYM 282
>gi|317179308|dbj|BAJ57096.1| flagellar hook-associated protein FlgL [Helicobacter pylori F30]
Length = 828
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 52/170 (30%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSGINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M T K K+ +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMETFKTKLIQSANDMHSETSRTAIANDLERLREHMMNVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSEGKYHGNGEDLNALISSDNLVPYNISGQDLFLGADKDKH 186
>gi|126444065|ref|YP_001061253.1| flagellar hook-associated protein FlgL [Burkholderia pseudomallei
668]
gi|126223556|gb|ABN87061.1| flagellar hook-associated protein 3 [Burkholderia pseudomallei 668]
Length = 304
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 31/280 (11%), Positives = 72/280 (25%), Gaps = 4/280 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I +N +Q R L Q R+++ R+ +D+ ++ + L
Sbjct: 3 ITSNQYHSIMAQVNRQATAGLMDTQIRMATEKRILRPSDDPTGAMRLAMLVQADAMLDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNK----ITAGVERGTDSKSIQSEITQLQSQL 119
+ +S++ ++ MS +D + K G D + + ++ L
Sbjct: 63 RATGAMLNSRLQHSERVMSGVVDQLQNEAVKHLGFAMDGSRSPEDLSAYAQVLASVRDTL 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
A +G ++ R D T + +
Sbjct: 123 LQSANTRDSSGNYLFSGTAITTAPIRFDPAAPVGSRYTFEGNLEKQTAVVGDGVTEVANE 182
Query: 180 STDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATF 239
S K+ D + D G + + + A + +T
Sbjct: 183 SLAEMADGLNALDEAIAKMSEPNANPNDPAYRDVLGRATDTIESVLASVNAKIGRMGSTQ 242
Query: 240 DQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATY 279
+ + + + G + +
Sbjct: 243 ARLQMLDELHESAQIVGNQAALDVGKISPEEVFTDYQSYM 282
>gi|317181639|dbj|BAJ59423.1| flagellar hook-associated protein FlgL [Helicobacter pylori F57]
Length = 828
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/170 (11%), Positives = 53/170 (31%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSGINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M T K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMETFKTKLIQSANDVHSETSRAAIANDLERLREHMMNVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSEGKYHGNGEDLNALISSDNLVPYNISGQDLFLGTDKDKH 186
>gi|332528572|ref|ZP_08404557.1| flagellin-like protein [Hylemonella gracilis ATCC 19624]
gi|332041978|gb|EGI78319.1| flagellin-like protein [Hylemonella gracilis ATCC 19624]
Length = 49
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWS 48
I TN ++++A + + +L R+SSGLR++ A D+AA +
Sbjct: 3 AVINTNINSLTAQRNQGISDKSLSTAIQRLSSGLRINSAKDDAAGLA 49
>gi|118475640|ref|YP_891858.1| flagellar hook-associated protein [Campylobacter fetus subsp. fetus
82-40]
gi|118414866|gb|ABK83286.1| flagellar hook-associated protein [Campylobacter fetus subsp. fetus
82-40]
Length = 947
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 38/360 (10%), Positives = 100/360 (27%), Gaps = 3/360 (0%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+ + ++ + R SGL++ ++ DN++ + ++ + L V +
Sbjct: 11 NNLSNYQASAKSIYDINQRYDSGLKIQNSYDNSSIYVDGTRLEYEINLLDQVKQTSTKAT 70
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQ---LQSQLRDIARGSSF 128
+ ++ + ++ K K+ + S + L+ L DIA S
Sbjct: 71 EFSKNSDKALNDFVSKLTEFKTKLIQAGNDIHNETSRNAIANDLEGLKKHLIDIANSSIN 130
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
+ T L + A + G+ + T Y +D +T+ L D +
Sbjct: 131 GQFLFSGTALDTKPIDSAGNYHGNNQLINAAIGANQTTAYNIDGQTLFLGKDNDYKKILT 190
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
K + ++ + + ++ K
Sbjct: 191 TNVSLIDNKTKLTSDATNYLNAANKILDLIGGNYRSEELVAQIGKMNPELDFADPAALAD 250
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
T T + + +G + + N ++ +
Sbjct: 251 TTFYMQGRKPNGETFSTKFKVTADSSIQNLLDNIGYALGNDKNGKNNVVSVAINNSGQIE 310
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
+ + + P+ G + ++ H + EK + + + +
Sbjct: 311 VTDLKSGNQMTELHLFGLTDVRGPETFKVGDRDIVIDPATHTDFRVTTEKRTVGGVSTDV 370
Score = 40.1 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 25/317 (7%), Positives = 78/317 (24%), Gaps = 2/317 (0%)
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
+ + + + S + G + + + + Y D + T+
Sbjct: 626 DDMTYQQLNDIVSMVAAGNLPSGQPNTNVIANIDTASRNTYADANALKTALKNGVTDVQA 685
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
+ + + +A I + N A
Sbjct: 686 QGIIDRVVDASGIAYPIDFTANGNALRDIKDAILGDQDYVTSRYNEYNTAIKSASSTINT 745
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTV 308
+ + T+ + + A + + T
Sbjct: 746 TLDYRGNMVVTDKTASKTDIEVTLFEDRGRGNIEFTDMYKRDAAGNIELDAAGNRIIDTY 805
Query: 309 AKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNE--KLAMEEMVS 366
+ + + + + D + ++ + ++ ++ +
Sbjct: 806 QSTTGSLFSFTSNNAIAIDEPSVDIFKDLDDMIQSVRDGSYRGDPDASDPRTTGIQGALK 865
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
ID + +IGS ++ + D +++ V +++AD+
Sbjct: 866 KIDHLMDHINKQHTQIGSYTNSLTATGDRATILKVNVSSVKSEIMEADIGETYLMFQQRL 925
Query: 427 TQQQLAVQALSIVNNST 443
Q +QA + + +
Sbjct: 926 MAYQAMLQATAKTSQIS 942
>gi|261839151|gb|ACX98916.1| flagellar hook-associated protein FlgL [Helicobacter pylori 52]
Length = 828
Score = 48.6 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/170 (11%), Positives = 53/170 (31%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDTNTQIASGLKIRYGYQNSNINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M T K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMETFKTKLIQSANDVHSETSRAAIANDLERLREHMMNVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSEGKYHGNGEDLNALISSDNLVPYNISGQDLFLGADKDKH 186
>gi|317180101|dbj|BAJ57887.1| flagellar hook-associated protein FlgL [Helicobacter pylori F32]
Length = 828
Score = 48.2 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 52/170 (30%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSGINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M T K K+ +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMETFKTKLIQSANDMHSETSRAAIANDLERLREHMMNVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSEGKYHGNGEDLNALISSDNLVPYNISGQDLFLGADKDKH 186
>gi|322378700|ref|ZP_08053132.1| flagellar hook-associated protein FlgL [Helicobacter suis HS1]
gi|321148875|gb|EFX43343.1| flagellar hook-associated protein FlgL [Helicobacter suis HS1]
Length = 843
Score = 48.2 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 28/258 (10%), Positives = 70/258 (27%), Gaps = 3/258 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ L ++++SGL+ N+ + + L D +
Sbjct: 17 NALQNKLNTANNKIASGLKSEYGYQNSQVNNQNLKYGFETNTLDQAHDVAKSAYTATLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M K K+ T ++I ++ +L++ + ++A S +
Sbjct: 77 DKALGELSSTMQQFKVKLIQAASDVHSTTSRQAIALDLEKLKNHMINVANTSIGGEYLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+ + A + G+ + + Y + + L D +
Sbjct: 137 GSKVDRPPFDAAGNYYGNDENLNALVGSHNLVPYNISGTNLFLGKDADKQTSIIANIKKF 196
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ D + T + L G + + + + A
Sbjct: 197 NQSKLHPDIMDSFNKTQNPQEVYITAQDTLRDLIGDNDNNPSNDKPEYFYLQGVRPDGSA 256
Query: 255 APAAPNTTSGTSGSKSPS 272
A + S S +
Sbjct: 257 FKAKFSLDKAYSNKDSAT 274
>gi|302382562|ref|YP_003818385.1| flagellin domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302193190|gb|ADL00762.1| flagellin domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 309
Score = 48.2 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 30/76 (39%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+S +D A + GS+ R+ ++++ V + DAD+A T L
Sbjct: 223 AQLSRLDAAKTATVDTASRNGSLQKRVEQIGLSHTGQLTSLDEMVSKRTDADLAKAVTDL 282
Query: 423 SALQTQQQLAVQALSI 438
Q Q + Q +S
Sbjct: 283 QLSQIAVQASAQVVSQ 298
>gi|322380051|ref|ZP_08054312.1| flagellar hook-associated protein FlgL [Helicobacter suis HS5]
gi|321147520|gb|EFX42159.1| flagellar hook-associated protein FlgL [Helicobacter suis HS5]
Length = 843
Score = 48.2 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 28/258 (10%), Positives = 70/258 (27%), Gaps = 3/258 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ L ++++SGL+ N+ + + L D +
Sbjct: 17 NALQNKLNTANNKIASGLKSEYGYQNSQVNNQNLKYGFETNTLDQAHDVAKSAYTATLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M K K+ T ++I ++ +L++ + ++A S +
Sbjct: 77 DKALGELSSTMQQFKVKLIQAASDVHSTTSRQAIALDLEKLKNHMINVANTSIGGEYLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+ + A + G+ + + Y + + L D +
Sbjct: 137 GSKVDRPPFDAAGNYYGNDENLNALVGSHNLVPYNISGTNLFLGKDADKQTSIIANIKKF 196
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ D + T + L G + + + + A
Sbjct: 197 NQSKLHPDIMDSFNKTQNPQEVYITAQDTLRDLIGDNDNNPSNDKPEYFYLQGVRPDGSA 256
Query: 255 APAAPNTTSGTSGSKSPS 272
A + S S +
Sbjct: 257 FKAKFSLDKAYSNKDSAT 274
>gi|14279301|gb|AAK58562.1| flagellin [Candidatus Borrelia texasensis]
Length = 200
Score = 48.2 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 15/136 (11%), Positives = 37/136 (27%)
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
G+ W + + N A V N + +
Sbjct: 65 GSQASWTLRVHVGANQDEAIAVNIYAANVANLFAGEGAQVAPAQEGAQQEGIQAAPAPAA 124
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
+ + +S I+ I+ + +G+ +R+ + + +
Sbjct: 125 APAQGGVNSPVNVTTTVDANMSLSKIENAIRMVSDQRANLGAFQNRLESIKASTEYAIEN 184
Query: 403 VEKGVGRLVDADMASE 418
++ ++ DA M E
Sbjct: 185 LKSSYAQIKDATMTDE 200
>gi|33592486|ref|NP_880130.1| flagellar hook-associated protein FlgL [Bordetella pertussis Tohama
I]
gi|33572132|emb|CAE41674.1| flagellar hook-associated protein 3 [Bordetella pertussis Tohama I]
gi|332381903|gb|AEE66750.1| flagellar hook-associated protein FlgL [Bordetella pertussis CS]
Length = 510
Score = 48.2 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 32/294 (10%), Positives = 74/294 (25%), Gaps = 6/294 (2%)
Query: 8 HSAMSASQKLR---DINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
+A+ L + + +Q+++SSG RV AD+ ++A + + S
Sbjct: 4 STALIYQNGLNGVLNQEAAMARLQEQLSSGRRVLTPADDPLAAALAINVSQTSSMNSNYD 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL---QSQLRD 121
+ + + M + ++ Q+ + L + +L
Sbjct: 64 ANRKQAEQALGAQTNTLQSVVKNMQEMLKRVVEAGNGTMSDADRQALVIALKGAREELVG 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+A + NG+ G + + G + + + +D + S
Sbjct: 124 LANATDGNGQYLFSGYKGFTQPYSFDAATGKVTYNGDLGQRGIQVDQSRLMSGGDVGSDI 183
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G L +D + +
Sbjct: 184 FNSVTSGTLAYIADAGAGNTGTGQYSAVSFDGPRAGNYVGRDFRIEFTRDAVTDELQYSV 243
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
+P P P + S+ S + + K
Sbjct: 244 LSDPPVVPPEQPLPANMPYSEGSVIDMNGVSIKLSGQPEAGDVFTVETPKSWKM 297
Score = 41.3 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 24/71 (33%)
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
++ + +G+ + + + + K + L D ++ ++ L
Sbjct: 427 KKLNLSLDNVLTVQASVGARLNELEALGNTGAQKVLSYVKQLSDLEDVNIYQATSDLLLR 486
Query: 426 QTQQQLAVQAL 436
Q Q A AL
Sbjct: 487 QVALQAASLAL 497
>gi|33596146|ref|NP_883789.1| flagellar hook-associated protein FlgL [Bordetella parapertussis
12822]
gi|33601548|ref|NP_889108.1| flagellar hook-associated protein FlgL [Bordetella bronchiseptica
RB50]
gi|33573149|emb|CAE36797.1| flagellar hook-associated protein 3 [Bordetella parapertussis]
gi|33575984|emb|CAE33063.1| flagellar hook-associated protein 3 [Bordetella bronchiseptica
RB50]
Length = 510
Score = 48.2 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 32/294 (10%), Positives = 74/294 (25%), Gaps = 6/294 (2%)
Query: 8 HSAMSASQKLR---DINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
+A+ L + + +Q+++SSG RV AD+ ++A + + S
Sbjct: 4 STALIYQNGLNGVLNQEAAMARLQEQLSSGRRVLTPADDPLAAALAVNVSQTSSMNSNYD 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL---QSQLRD 121
+ + + M + ++ Q+ + L + +L
Sbjct: 64 ANRKQAEQALGAQTNTLQSVVKNMQEMLKRVVEAGNGTMSDADRQALVIALKGAREELVG 123
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+A + NG+ G + + G + + + +D + S
Sbjct: 124 LANATDGNGQYLFSGYKGFTQPYSFDAATGKVTYNGDLGQRGIQVDQSRLMSGGDVGSDI 183
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ G L +D + +
Sbjct: 184 FNSVTSGTLAYIADAGAGNAGTGQYSAVSFDGPRAGNYVGRDFRIEFTRDAVTDELQYSV 243
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
+P P P + S+ S + + K
Sbjct: 244 LSDPPVVPPEQPLPANMPYSEGSVIDMNGVSIKLSGQPEAGDVFTVETPKSWKM 297
Score = 40.5 bits (92), Expect = 0.57, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 24/71 (33%)
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
++ + +G+ + + + + K + L D ++ ++ L
Sbjct: 427 KKLNLSLDNVLTVQASVGARLNELEALGNTGAQKGLSYVKQLSDLEDVNIYQATSDLLLR 486
Query: 426 QTQQQLAVQAL 436
Q Q A AL
Sbjct: 487 QVALQAASLAL 497
>gi|295097197|emb|CBK86287.1| flagellar hook-associated protein 3 [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 290
Score = 48.2 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 18/167 (10%), Positives = 50/167 (29%), Gaps = 4/167 (2%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+ + + ++S+G + A+D+ + A + L S+ S ++
Sbjct: 8 SMSKRVSDNNNIYLQLSAGKSLLRASDDPKSATDAVNYQDALAKLELYSNVRSTVRSSLE 67
Query: 76 IAKAGMSKAIDVMSTIKNK----ITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
++ ++++T + D +++ +EI ++ L D+A +G
Sbjct: 68 HEDNILNGVGNLLTTTLTEKIVAAKTESYSDEDRRALGAEIKGIRGNLMDLANNRDGSGR 127
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ V T + +
Sbjct: 128 YIFGGFKSDTAPFDDAGNYVGGDTARRQTVADGTDMQTGHLGSDVFG 174
>gi|317010575|gb|ADU84322.1| flagellar hook-associated protein FlgL [Helicobacter pylori
SouthAfrica7]
Length = 827
Score = 47.8 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 19/170 (11%), Positives = 53/170 (31%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L+ D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLNQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M K K+ T +I +++ +L+ + +IA S +
Sbjct: 77 DKALQEFSKTMEAFKTKLIQSANDVHSETSRNAIANDLERLREHMINIANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSEGKYHGNGEDLNALVSSDNLVPYNISGQDLFLGTDKDKH 186
>gi|62183622|gb|AAX73249.1| flagellin [Borrelia burgdorferi]
Length = 106
Score = 47.8 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 6/80 (7%), Positives = 26/80 (32%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 27 GAQQSAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 86
Query: 394 DFIKLMRDAVEKGVGRLVDA 413
+ + + ++ ++ DA
Sbjct: 87 NSTEYAIENLKASYAQIKDA 106
>gi|291236750|ref|XP_002738301.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 1918
Score = 47.8 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 41/432 (9%), Positives = 113/432 (26%), Gaps = 17/432 (3%)
Query: 7 NHSAM-SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSD 65
N + A L+ + +L + +++S S D A + M + A
Sbjct: 1468 NSGTLEQAQITLQALQSDLNKLDIQITSAAS-STTGDIADLEAQVDDMSTK---TEAARQ 1523
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD---I 122
+ V A+ + +S +++ T ++ + S +E+
Sbjct: 1524 SALQALQTVQEAQLLHDNTTNRVSDLRSAATFVQQKSENLDSQATEMLSRAQSTNQEATA 1583
Query: 123 ARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTD 182
A + + + TD+ + S + + + ++ + Y +D + +
Sbjct: 1584 ALTKAMSPNDNADTDVENLIDSASVKIAQAGAIENQATQALEQNLYIIDEVADAGNITDI 1643
Query: 183 GTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQA 242
+ + + + + + + ++ +QA
Sbjct: 1644 TLAEVNTVTADVTARYDRSTNAYTLANSALELSGATFDAANEMLNTLENFESIVDEVEQA 1703
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
A V + T + S + + +D + P
Sbjct: 1704 ADTAMDTVASVVELSNSATLEARAIQSELSDSELHADSALSIADEAFNMAEAERESVAPA 1763
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
+ DT+S D + + ++ T + +
Sbjct: 1764 NNRANQLAEEAAAKLTDTDSLIQDVKSINTTLVAPQQAICNDYATTMD-----TLEATVL 1818
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQ----EDFIKLMRDAVEKGVGRLVDADMASE 418
E + + + + + + + + + + D A+
Sbjct: 1819 EATDQSNQALVMVAQTETDLKLLLASLENIGTIDTSQLSGYAERIAAARNTFTETDFAAS 1878
Query: 419 STRLSALQTQQQ 430
L +QQ
Sbjct: 1879 IAALKIAVDEQQ 1890
>gi|78777235|ref|YP_393550.1| putative flagellin [Sulfurimonas denitrificans DSM 1251]
gi|78497775|gb|ABB44315.1| putative flagellin [Sulfurimonas denitrificans DSM 1251]
Length = 701
Score = 47.8 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 30/357 (8%), Positives = 93/357 (26%), Gaps = 6/357 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
++ +L V +++SGL++ A ++ ++ + ++ L + +
Sbjct: 18 SRLSQSLFDVNKQIASGLKIQYAQEDIRAFTETMRLDNEITTLDQSKKSTVSAMKFSNQT 77
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGTDSKSI----QSEITQLQSQLRDIARGSSFNGENW 133
+ +++ M + + G +S++ E+ L++ + +A S +
Sbjct: 78 DSVLNEFALSMDRARVLLVKASNSGVNSEASLDAIAYELRGLETHFKSLANTSINGQYLF 137
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
+ + + + + G+ T+ Y + + +
Sbjct: 138 SGSAIDTKPIADDGTYNGNDAILKAFTGSGTSQQYNISGQELFFGEKQSTRREITTNVIQ 197
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
+ + D V S L + ++ I
Sbjct: 198 LNLSSKYPDFTDAAVEGDTKYLKSSDTIRDLMGDTDNFIDVGTNKHF--FYITGTKSNGS 255
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+ + S G + V I + S+ +
Sbjct: 256 SFKEKLPMSDDEKISDLLKKIGDMYGNTPGVDVVNVSMNPSGQIIIEDKIRGSSSIEFHM 315
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ + + + + A + K ++ ++ D
Sbjct: 316 VGATDFSGGAAANVTNIDDLGVGETSFNSIILGSSTATNPNLHVKEFLKSSMTSADN 372
Score = 44.3 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 49/124 (39%), Gaps = 3/124 (2%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + T D + D K ++ + V + + +E ++ ID +
Sbjct: 567 MTFNSNNALTVRDPKTDFFKTLNDVINAVENYKLYPDSNSGDARSIGIENAIAMIDELHE 626
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
T + ++G+ ++ + + +++++ + ++D DMA L+ L T Q
Sbjct: 627 HVTRSHSQVGAQTNALSKSLERVEMLKMSSMTLRSSVIDTDMAEAHLTLAQLNTNYQA-- 684
Query: 434 QALS 437
LS
Sbjct: 685 -MLS 687
>gi|197104257|ref|YP_002129634.1| flagellin [Phenylobacterium zucineum HLK1]
gi|196477677|gb|ACG77205.1| flagellin [Phenylobacterium zucineum HLK1]
Length = 310
Score = 47.8 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 50/154 (32%)
Query: 279 YIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSG 338
R + T+ I + + + + V T D D+ +
Sbjct: 139 DTRPMTATALSDLTSGPPIANWFKNDSFLTSAKVDEATTVSTGILADDVGTDMLAAFQTI 198
Query: 339 YSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ ++ +E ++ D + T A + G I R+ + +K
Sbjct: 199 QAFHEGGSGPFTGAMTDAQRTFLEGQLATWDGVREDVTNVAARNGMIQKRVETVREDLKT 258
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+A+ +G + DADMA +L Q Q A
Sbjct: 259 RDNALAGMMGDITDADMAEAVAQLQQAQLSVQAA 292
>gi|167644971|ref|YP_001682634.1| flagellin [Caulobacter sp. K31]
gi|167347401|gb|ABZ70136.1| flagellin, putative [Caulobacter sp. K31]
Length = 307
Score = 47.8 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 40/161 (24%)
Query: 277 ATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
A + + T + + V D +
Sbjct: 135 AKSDTQPTTATSMADLTAGPPIATLFKNDQYVTSNRIDDTTSVDTGQLADKLGTGVYGVF 194
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+ ++ ++ D+ A + G R + +
Sbjct: 195 QQVQAYVDANGPFTGKLTQTQSDFLKSLLPTFDSVKTGLVTAQAQNGLNQKRFDTAKTDL 254
Query: 397 KLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALS 437
D + VG + D DMA TRL + + Q + Q +
Sbjct: 255 SDQADTLTTMVGGITDVDMAEAITRLESAKLAVQASAQVFA 295
>gi|210134493|ref|YP_002300932.1| flagellar hook-associated protein FlgL [Helicobacter pylori P12]
gi|210132461|gb|ACJ07452.1| flagellar-hook associated protein 3 [Helicobacter pylori P12]
Length = 828
Score = 47.8 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 52/170 (30%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLREHMINVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSNGKYHGNGEDLNALISSDNLVPYNISGQDLFLGTDKDKH 186
>gi|317012136|gb|ADU82744.1| flagellar hook-associated protein FlgL [Helicobacter pylori
Lithuania75]
Length = 828
Score = 47.8 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 52/170 (30%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLREHMMNVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSNGKYHGNGEDLNALISSDNLVPYNISGQDLFLGTDKDKH 186
>gi|315452962|ref|YP_004073232.1| flagellar hook-associated protein 3 [Helicobacter felis ATCC 49179]
gi|315132014|emb|CBY82642.1| flagellar hook-associated protein 3 [Helicobacter felis ATCC 49179]
Length = 843
Score = 47.8 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 29/312 (9%), Positives = 78/312 (25%), Gaps = 3/312 (0%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ L +++SGL++ + ++ + L D +
Sbjct: 17 NTLQNKLNTANTKIASGLKIQNGYQDSNINDQNLKYGFEENTLDQNIDVAKSAHTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+S+ M K K+ T ++I ++ +L++ + ++A S + +
Sbjct: 77 DKALSELSSTMEQFKTKLIQAASDVHSNTSRQAIALDLEKLKAHMINVANTSIGDEYLFA 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+ + + G+ + + Y + + + L D + +
Sbjct: 137 GSKVDRKPFDSKGNYYGNDENLNALVSSNNLVPYNVTGKALFLGKDLDKQKHITTNIKMF 196
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ D + L G + + + + A
Sbjct: 197 NQSKLHPDIMDALNRTAEPQEVFIQTGDTLRDLIGDNDDDPSNDSKEYFYLQGVRPDGGA 256
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
A + + + + + G GN
Sbjct: 257 FKAKFALDKAYTKKEDATTVNDLLDQIGRAYGNTSDNKVVDVSLNAWGEIEIKDLTTGNA 316
Query: 315 HYYVDTESTTLD 326
S+ D
Sbjct: 317 TIDFHMISSDRD 328
>gi|189164119|gb|ACD77167.1| flagellin C [Bacillus thuringiensis serovar entomocidus]
gi|189339463|gb|ACD89090.1| flagellin [Bacillus thuringiensis serovar entomocidus]
Length = 44
Score = 47.8 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAA 45
I TN +M+A Q L + + V + +++G +++ A+DN A
Sbjct: 3 IGTNILSMNARQSLYENEKRMNVSMEHLATGKKLNHASDNPA 44
>gi|15611350|ref|NP_223001.1| flagellar hook-associated protein FlgL [Helicobacter pylori J99]
gi|4154805|gb|AAD05861.1| putative FLAGELLAR-HOOK ASSOCIATED PROTEIN 3 (HAP3) [Helicobacter
pylori J99]
Length = 828
Score = 47.8 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 52/170 (30%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLKEHMINVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSNGKYHGNGEDLNALISSDNLVPYNISGQDLFLGTDKDKH 186
>gi|315586288|gb|ADU40669.1| flagellar hook-associated protein 3 [Helicobacter pylori 35A]
Length = 828
Score = 47.8 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 19/170 (11%), Positives = 53/170 (31%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSGINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M T K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMETFKTKLIQSANDVHSETSRAAIANDLERLREHMMNVANTSMRGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSEGKYHGNGEDLNALISSDNLVPYNISGQDLFLGTDKDKH 186
>gi|46917414|dbj|BAD18056.1| flagellin protein [Borrelia valaisiana]
Length = 199
Score = 47.4 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDI 122
+ + + +++ V+ +K D SIQ EI QL ++ I
Sbjct: 1 NTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRI 60
Query: 123 ARGSSFNGENWLRTDLGSSTASIAK 147
A + +N + L S A+
Sbjct: 61 ADQAQYNQMHMLSNKSASQNVRTAE 85
>gi|46917408|dbj|BAD18053.1| flagellin protein [Borrelia garinii]
gi|46917412|dbj|BAD18055.1| flagellin protein [Borrelia garinii]
Length = 199
Score = 47.4 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDI 122
+ + + +++ V+ +K D SIQ EI QL ++ I
Sbjct: 1 NTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRI 60
Query: 123 ARGSSFNGENWLRTDLGSSTASIAK 147
A + +N + L S A+
Sbjct: 61 ADQAQYNQMHMLSNKSASQNVRTAE 85
>gi|23263391|dbj|BAC16533.1| flagellin [Borrelia burgdorferi]
gi|51848577|dbj|BAD38985.1| flagellin [Borrelia burgdorferi]
Length = 199
Score = 47.4 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDI 122
+ + + +++ V+ +K D SIQ EI QL ++ I
Sbjct: 1 NTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRI 60
Query: 123 ARGSSFNGENWLRTDLGSSTASIAK 147
A + +N + L S A+
Sbjct: 61 ADQAQYNQMHMLSNKSASQNVRTAE 85
>gi|332092903|gb|EGI97971.1| flagellar hook-associated protein 3 domain protein [Shigella
dysenteriae 155-74]
Length = 108
Score = 47.4 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 36/105 (34%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
T + + + +++S+G RV + +D+ S A ++ S +
Sbjct: 4 STQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYT 63
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQ 109
A + KV + ++ +S+ + + KI
Sbjct: 64 LARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRA 108
>gi|307636990|gb|ADN79440.1| Flagellar hook-associated protein [Helicobacter pylori 908]
Length = 839
Score = 47.4 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 52/170 (30%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 28 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 87
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M K K+ T +I +++ +L+ + ++A S +
Sbjct: 88 DKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLKEHMMNVANTSIGGEFLFG 147
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 148 GSKVDRPPIDSNGKYHGNGEDLNALISSDNLVPYNISGQDLFLGADKDKH 197
>gi|15644923|ref|NP_207093.1| flagellar hook-associated protein FlgL [Helicobacter pylori 26695]
gi|2313393|gb|AAD07364.1| flagellin B homolog (fla) [Helicobacter pylori 26695]
Length = 828
Score = 47.4 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 52/170 (30%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLKEHMINVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSNGKYHGNGEDLNVLISSDNLVPYNISGQDLFLGTDKDKH 186
>gi|46917416|dbj|BAD18057.1| flagellin protein [Borrelia garinii]
Length = 193
Score = 47.4 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDI 122
+ + + +++ V+ +K D SIQ EI QL ++ I
Sbjct: 1 NTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRI 60
Query: 123 ARGSSFNGENWLRTDLGSSTASIAK 147
A + +N + L S A+
Sbjct: 61 ADQAQYNQMHMLSNKSASQNVRTAE 85
>gi|317013741|gb|ADU81177.1| flagellar hook-associated protein FlgL [Helicobacter pylori
Gambia94/24]
Length = 828
Score = 47.4 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 52/170 (30%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLREHMINVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSNGKYHGNGEDLNALISSDNLVPYNISGQDLFLGADKDKH 186
>gi|332673140|gb|AEE69957.1| flagellar hook-associated protein 3 [Helicobacter pylori 83]
Length = 828
Score = 47.4 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 19/170 (11%), Positives = 54/170 (31%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L+ D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLNQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M T K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMETFKTKLIQSANDVHSETSRAAIANDLERLREHMMNVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSEGKYHGNGEDLNALISSDNLVPYNISGQDLFLGADKDKH 186
>gi|308184098|ref|YP_003928231.1| flagellar hook-associated protein FlgL [Helicobacter pylori SJM180]
gi|308060018|gb|ADO01914.1| flagellar hook-associated protein FlgL [Helicobacter pylori SJM180]
Length = 828
Score = 47.4 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 52/170 (30%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLREHMMNVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSNGKYHGNGEDLNALISSDNLVPYNISGQDLFLGADKDKH 186
>gi|189339471|gb|ACD89094.1| flagellin [Bacillus thuringiensis serovar nigeriensis]
Length = 44
Score = 47.4 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAA 45
I TN +M+A Q L + + V + +++G +++ A+DN A
Sbjct: 3 IGTNVLSMNARQSLYENKKRMNVSMEHLATGKKLNHASDNPA 44
>gi|208434241|ref|YP_002265907.1| putative flagellar-hook associated protein 3 [Helicobacter pylori
G27]
gi|208432170|gb|ACI27041.1| putative flagellar-hook associated protein 3 [Helicobacter pylori
G27]
Length = 828
Score = 47.4 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 52/170 (30%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLREHMMNVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSNGKYHGNGEDLNALISSDNLVPYNISGQDLFLGADKDKH 186
>gi|261837740|gb|ACX97506.1| flagellar-hook associated protein 3 [Helicobacter pylori 51]
Length = 828
Score = 47.4 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 19/170 (11%), Positives = 53/170 (31%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSNINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M T K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMETFKTKLIQSANDVHSETSRAAIANDLERLREHMMNVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSEGKYHGNGEDLNALISSDNLVPYNISGQDLFLGADKDKH 186
>gi|308063157|gb|ADO05044.1| flagellar hook-associated protein FlgL [Helicobacter pylori Sat464]
Length = 828
Score = 47.4 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 19/170 (11%), Positives = 53/170 (31%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSNINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M T K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMETFKTKLIQSANDVHSETSRAAIANDLERLREHMMNVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSEGKYHGNGEDLNALISSDNLVPYNISGQDLFLGADKDKH 186
>gi|325995582|gb|ADZ50987.1| Flagellar hook-associated protein [Helicobacter pylori 2018]
gi|325997178|gb|ADZ49386.1| Flagellar hook-associated protein [Helicobacter pylori 2017]
Length = 838
Score = 47.4 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 52/170 (30%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 27 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 86
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M K K+ T +I +++ +L+ + ++A S +
Sbjct: 87 DKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLKEHMMNVANTSIGGEFLFG 146
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 147 GSKVDRPPIDSNGKYHGNGEDLNALISSDNLVPYNISGQDLFLGADKDKH 196
>gi|218460721|ref|ZP_03500812.1| flagellin C protein [Rhizobium etli Kim 5]
Length = 76
Score = 47.4 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 376 TAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
T + IG + +RI Q D+ + D+++K VG LVD DM S R A++TQ+Q+AV+A
Sbjct: 1 TTTSASIGVMKARIDDQIDYTADLSDSIDKSVGALVDTDMDEASIRQKAIETQKQMAVEA 60
Query: 436 LSIVNNSTARILSLF 450
+SI+N + ++IL L
Sbjct: 61 ISILNTAASKILILL 75
>gi|189339499|gb|ACD89108.1| flagellin [Bacillus thuringiensis serovar yosoo]
Length = 44
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAA 45
I TN + +A Q L + + VV + +++G +++ A+DN A
Sbjct: 3 IGTNVLSRNARQSLYENEKRMNVVMEHLATGKKLNHASDNPA 44
>gi|195953200|ref|YP_002121490.1| hypothetical protein HY04AAS1_0825 [Hydrogenobaculum sp. Y04AAS1]
gi|195932812|gb|ACG57512.1| hypothetical protein HY04AAS1_0825 [Hydrogenobaculum sp. Y04AAS1]
Length = 597
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 35/349 (10%), Positives = 96/349 (27%), Gaps = 1/349 (0%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
NL+ + S+G ++ + N +K + LS S S+ + + +
Sbjct: 23 NNLQDTIEEASTGYKLLNIGQNPGDTQQVINLKKEIVLLSTYSQNAFSASNVLTTTTSVL 82
Query: 82 SKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSS 141
D + T+ + A T + + + Q + ++ + GSS
Sbjct: 83 GNLYDYLQTVNTDVVAAANEATYNSTQLINMGQSIYSILNLTLSKANEKFGDNYLFGGSS 142
Query: 142 TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
+ + S+ + Y + + + ++
Sbjct: 143 LSIQPFTADFSYQASTTDFYTQISNSYQVPTYLNGQNVFGLNIQTTSTSYNSYTQSFSGP 202
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
I + ++ +G A ++ + T
Sbjct: 203 GELIIHYGTNVYQINYNNTPYEWDWDAGLSSTNAPLGASGMISLSMVTASATNVYNISYT 262
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY-TNSTVAKVGNTHYYVDT 320
++ T + ++ S + + T I+ + + N+ Y +D
Sbjct: 263 STDTLSTLLNKISTSTGGDFKASILHNLDNTYGIEISPSTNNLSATYSLYDSNSLYKLDQ 322
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFID 369
+ + + + SG + ++ + + ++ ID
Sbjct: 323 TPSNVLELSNYINNVFSGTLQAFIRQNSNSTFSLEIAGKDVAKPLNIID 371
>gi|331005167|ref|ZP_08328566.1| flagellin FliC [gamma proteobacterium IMCC1989]
gi|330421022|gb|EGG95289.1| flagellin FliC [gamma proteobacterium IMCC1989]
Length = 41
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+DAD A+E+ LS Q QQ + L+ N ++LSL
Sbjct: 1 MDADFAAETAALSRSQVLQQASQAMLAQANARPQQVLSLL 40
>gi|37681984|gb|AAQ97872.1| FlgL [Photorhabdus luminescens]
Length = 309
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 23/190 (12%), Positives = 52/190 (27%), Gaps = 6/190 (3%)
Query: 17 LRDINYNLEVVQDR---VSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ I + +SSG RV + +D+ S ++ A +
Sbjct: 1 MTSITTAQSKWMQQGAQLSSGQRVINPSDDPMAASQGVMVAQAEAQNQQYITARSFAKNA 60
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL---QSQLRDIARGSSFNG 130
+ + + +SKA+ V+ I + A V + S QL + QL ++ + NG
Sbjct: 61 ISMQLSVVSKAVGVVQDIHESLVATVNGVLSDEDRNSLAIQLTGFKEQLVNLGNTTDGNG 120
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+ + ++ + +
Sbjct: 121 RYIFAGYKTDMKPFDESTTGTVSYLGGSEEITQKVDSNRSMIIGHTGKQVFLSSTSNPIK 180
Query: 191 DRNHKIKVEP 200
+ +
Sbjct: 181 EPDGNQSESD 190
>gi|113734892|dbj|BAF30769.1| flagellin [Campylobacter lari]
Length = 249
Score = 47.4 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 42/126 (33%), Gaps = 9/126 (7%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAAD--NAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
L + E + ++ V A D + A +IA ++S +
Sbjct: 14 YLNQAQKSQEKALENIA----VMRAIDGSDGANLAIADSLRSQYSTIDQGILNAYDSVGV 69
Query: 74 VDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ IA + +S + + +E +L S + D ++FNG
Sbjct: 70 LQIADSTLSNISATADRLNELSVRSNSAALNDRQKSMLNAEANKLISSINDAFSNATFNG 129
Query: 131 ENWLRT 136
+N ++
Sbjct: 130 KNVFQS 135
>gi|23263379|dbj|BAC16527.1| flagellin [Borrelia garinii]
Length = 199
Score = 47.0 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDI 122
+ + + +++ V+ +K D SIQ EI QL ++ I
Sbjct: 1 NTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRI 60
Query: 123 ARGSSFNGENWLRTDLGSSTASIAK 147
A + +N + L S A+
Sbjct: 61 ADQAQYNQMHMLSNKSASQNVRTAE 85
>gi|23263375|dbj|BAC16525.1| flagellin [Borrelia valaisiana]
gi|46917418|dbj|BAD18058.1| flagellin protein [Borrelia valaisiana]
Length = 199
Score = 47.0 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDI 122
+ + + +++ V+ +K D SIQ EI QL ++ I
Sbjct: 1 NTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRI 60
Query: 123 ARGSSFNGENWLRTDLGSSTASIAK 147
A + +N + L + A+
Sbjct: 61 ADQAQYNQMHMLSNKSAAQNVKTAE 85
>gi|189164097|gb|ACD77155.1| flagellin C [Bacillus thuringiensis serovar kenyae]
gi|189164101|gb|ACD77157.1| flagellin C [Bacillus thuringiensis serovar kenyae]
gi|189164105|gb|ACD77159.1| flagellin C [Bacillus thuringiensis serovar galleriae]
gi|189164109|gb|ACD77161.1| flagellin C [Bacillus thuringiensis serovar galleriae]
gi|189164113|gb|ACD77163.1| flagellin C [Bacillus thuringiensis serovar galleriae]
gi|189339426|gb|ACD89070.1| flagellin [Bacillus thuringiensis serovar galleriae]
Length = 44
Score = 47.0 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAA 45
I TN + +A Q L + + V + +++G +++ A+DN A
Sbjct: 3 IGTNVLSRNARQSLYENEKRMNVSMEHLATGKKLNHASDNPA 44
>gi|113734896|dbj|BAF30772.1| flagellin [Campylobacter lari]
gi|113734912|dbj|BAF30784.1| flagellin [Campylobacter lari]
Length = 249
Score = 47.0 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 43/124 (34%), Gaps = 5/124 (4%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
L + E + +++ + + + A +IA ++S G + +
Sbjct: 14 YLNQAQKSQEKALENIAAMRAIDGS--DGANLAIADSLRSQYGTIDQGVLNAYDSVGVLQ 71
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGEN 132
IA + ++ + + +E +L S + D ++FNG+N
Sbjct: 72 IADSALNNISATADRLNELSVRSNSAALNDRQKSMLNTEANKLISSINDAFSNATFNGKN 131
Query: 133 WLRT 136
++
Sbjct: 132 VFQS 135
>gi|23263393|dbj|BAC16534.1| flagellin [Borrelia garinii]
gi|46917402|dbj|BAD18050.1| flagellin protein [Borrelia garinii]
gi|46917404|dbj|BAD18051.1| flagellin protein [Borrelia garinii]
gi|46917406|dbj|BAD18052.1| flagellin protein [Borrelia garinii]
gi|46917410|dbj|BAD18054.1| flagellin protein [Borrelia garinii]
Length = 199
Score = 47.0 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDI 122
+ + + +++ V+ +K D SIQ EI QL ++ I
Sbjct: 1 NTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRI 60
Query: 123 ARGSSFNGENWLRTDLGSSTASIAK 147
A + +N + L S A+
Sbjct: 61 ADQAQYNQMHMLSNKSASQNVRTAE 85
>gi|108562722|ref|YP_627038.1| flagellar hook-associated protein FlgL [Helicobacter pylori HPAG1]
gi|107836495|gb|ABF84364.1| putative flagellar-hook associated protein 3 [Helicobacter pylori
HPAG1]
Length = 828
Score = 47.0 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 52/170 (30%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAKNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLREHMMNVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSNGKYHGNGEDLNALISSDNLVPYNISGQDLFLGADKDKH 186
>gi|319409180|emb|CBI82824.1| Flagellin [Bartonella schoenbuchensis R1]
Length = 382
Score = 47.0 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 47/86 (54%)
Query: 366 SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSAL 425
+ I I A KI S I++Q + +K + ++ + LVD +M ++S RLSAL
Sbjct: 296 NNIQDSITATLTAEAKINSTIDLINIQPELVKTLVGNIDSNIRALVDINMDAQSARLSAL 355
Query: 426 QTQQQLAVQALSIVNNSTARILSLFR 451
Q Q+QL+ Q L I N +T L+L +
Sbjct: 356 QIQKQLSAQTLPIANQNTYHTLALSQ 381
>gi|189339437|gb|ACD89075.1| flagellin [Bacillus thuringiensis serovar londrina]
gi|189339467|gb|ACD89092.1| flagellin [Bacillus thuringiensis serovar ostriniae]
gi|189339487|gb|ACD89102.1| flagellin [Bacillus thuringiensis serovar pondicheriensis]
Length = 44
Score = 47.0 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAA 45
I TN +M+A Q L + + V + +++G +++ A+DN A
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNHASDNPA 44
>gi|297379517|gb|ADI34404.1| Hypothetical protein HPV225_0313 [Helicobacter pylori v225d]
Length = 826
Score = 47.0 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 52/170 (30%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSNINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLREHMMNVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSEGKYHGNGEDLNALISSDNLVPYNISGQDLFLGTDKDKH 186
>gi|315638346|ref|ZP_07893525.1| flagellin subunit protein FlaC [Campylobacter upsaliensis JV21]
gi|315481557|gb|EFU72182.1| flagellin subunit protein FlaC [Campylobacter upsaliensis JV21]
Length = 249
Score = 47.0 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 50/133 (37%), Gaps = 5/133 (3%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N +AM + L + + + + +++ +S ++A +IA ++S + +
Sbjct: 5 NSNAMQQNHYLNNAQKSQDKALENIAAVRAIS--GIDSANLAIADSLRSQSSTIDQGVAN 62
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGV---ERGTDSKSIQSEITQLQSQLRDIA 123
+ IA A ++ + ++ E T+L + D
Sbjct: 63 AYDAIGVLQIADASLTNISQSADRLSELSVRMNSGIMTDAQKTMLRGEATRLTESINDSF 122
Query: 124 RGSSFNGENWLRT 136
++FNG+N +T
Sbjct: 123 NNATFNGKNVFQT 135
>gi|218886569|ref|YP_002435890.1| flagellin domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218757523|gb|ACL08422.1| flagellin domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 275
Score = 47.0 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 50/167 (29%)
Query: 43 NAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG 102
+ ++ +++D L S+ + S +D+A G++ ++ +K+
Sbjct: 52 DPTAAALTGRLRADASMLRQASNNVSEAKSIMDLANTGVTSLKTALTRMKDLANGVATGT 111
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
S+Q+E L SQ+ +S+NG L +S + S + +G
Sbjct: 112 MTYASVQAEYNSLASQITQTVASTSYNGIALLDGSAWASDDRVTVSGSSGSLEIQSGTSS 171
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
S+ T V
Sbjct: 172 FDLALTDFSSYKNAFTSTQINTVAKAAAMVTTLSGYITTVGTAATNY 218
>gi|308182470|ref|YP_003926597.1| flagellar hook-associated protein FlgL [Helicobacter pylori PeCan4]
gi|308064655|gb|ADO06547.1| flagellar hook-associated protein FlgL [Helicobacter pylori PeCan4]
Length = 828
Score = 47.0 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 52/170 (30%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLREHMINVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSEGKYHGNGEDLNALISSDNLVPYNISGQDLFLGTDKDKH 186
>gi|4760489|dbj|BAA77305.1| flagellin [Pseudomonas putida]
Length = 78
Score = 47.0 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 7/76 (9%), Positives = 22/76 (28%)
Query: 338 GYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
+ + + + ++ ID I +G+ +R+ D ++
Sbjct: 3 FGTATVSSTKETISQTDVTNIDNAQNALAVIDKAIGTIDGVRSGLGATQNRLTTTADNLQ 62
Query: 398 LMRDAVEKGVGRLVDA 413
++ + D
Sbjct: 63 NIQKNSTAARSTIQDV 78
>gi|298736758|ref|YP_003729288.1| flagellar hook-associated protein 3 FlgL [Helicobacter pylori B8]
gi|298355952|emb|CBI66824.1| flagellar hook-associated protein 3 FlgL [Helicobacter pylori B8]
Length = 828
Score = 46.7 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 52/170 (30%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLREHMMNVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSEGKYHGNGEDLNALISSDNLVPYNISGQDLFLGADKDKH 186
>gi|207091790|ref|ZP_03239577.1| flagellar hook-associated protein FlgL [Helicobacter pylori
HPKX_438_AG0C1]
Length = 828
Score = 46.7 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 52/170 (30%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLREHMMNVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSEGKYHGNGEDLNALISSDNLVPYNISGQDLFLGADKDKH 186
>gi|113734880|dbj|BAF30760.1| flagellin [Campylobacter lari]
gi|113734884|dbj|BAF30763.1| flagellin [Campylobacter lari]
Length = 249
Score = 46.7 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 43/124 (34%), Gaps = 5/124 (4%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
L + E + +++ + + + A +IA ++S + +
Sbjct: 14 YLNQTQKSQEKALENIAAIRAIDGS--DGANLAIADSLRSQYSTIDQGILNAYDSIGVLQ 71
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGEN 132
IA + ++ + + SE ++L + + D ++FNG+N
Sbjct: 72 IADSTLNNISATADKLNELSVRSNNAALNDRQKSMLNSEASKLVTSINDAFSNATFNGKN 131
Query: 133 WLRT 136
++
Sbjct: 132 VFQS 135
>gi|317008945|gb|ADU79525.1| flagellar hook-associated protein FlgL [Helicobacter pylori India7]
Length = 828
Score = 46.7 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 52/170 (30%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAHTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMEAFKTKLIQSANDVHSETSRTAIANDLERLREHMMNVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSEGKYHGNGEDLNALISSDNLVPYNISGQDLFLGADKDKH 186
>gi|57241931|ref|ZP_00369871.1| flagellin [Campylobacter upsaliensis RM3195]
gi|57017123|gb|EAL53904.1| flagellin [Campylobacter upsaliensis RM3195]
Length = 249
Score = 46.7 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 19/197 (9%), Positives = 52/197 (26%), Gaps = 2/197 (1%)
Query: 7 NHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDA 66
N +AM + L + + + + +++ +S ++A +IA ++S + +
Sbjct: 5 NSNAMQQNHYLNNAQKSQDKALENIAAMRAIS--GIDSANLAIADSLRSQSSTIDQGVAN 62
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGS 126
+ IA A ++ + + I
Sbjct: 63 AYDAIGVLQIADASLTNISQSADRLSELSVRMNSGIMTDAQKIMLRGEATRLTESINDSF 122
Query: 127 SFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTER 186
+ N + + + + I + L + ++
Sbjct: 123 NNATFNGKNVFQTMEFVVGSGTETTNLNSLSTDGLSIDNQESIASFTDQLANLRSEIGSG 182
Query: 187 YGLLDRNHKIKVEPQVL 203
L N V+ +
Sbjct: 183 INALTSNINSSVQNSIN 199
>gi|114569243|ref|YP_755923.1| flagellin [Maricaulis maris MCS10]
gi|114339705|gb|ABI64985.1| flagellin, putative [Maricaulis maris MCS10]
Length = 304
Score = 46.3 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ + T + G+ G+ + + ++ + +++ + L D DMA +TR A
Sbjct: 220 IQNVITALDNIYTKIGENGAAQANVETVKNSHSDRQVFLQQMLSDLEDVDMAEAATRFQA 279
Query: 425 LQTQQQLAV---QALSI 438
QT ++ +LS
Sbjct: 280 AQTALDVSAKTFSSLSQ 296
>gi|308061647|gb|ADO03535.1| flagellar hook-associated protein FlgL [Helicobacter pylori Cuz20]
Length = 826
Score = 46.3 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 19/170 (11%), Positives = 53/170 (31%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M T K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMETFKTKLIQSANDVHSETSRVAIANDLERLREHMMNVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSEGKYHGNGEDLNALISSDNLVPYNISGQDLFLGADKDKH 186
>gi|254778998|ref|YP_003057103.1| flagellar hook-associated protein FlgL [Helicobacter pylori B38]
gi|254000909|emb|CAX28845.1| Flagellar hook-associated protein 3 (HAP3) (Hook-filament junction
protein) [Helicobacter pylori B38]
Length = 828
Score = 46.3 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 52/170 (30%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAHTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLREHMMNVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSEGKYHGNGEDLNALISSDNLVPYNISGQDLFLGADKDKH 186
>gi|189164126|gb|ACD77170.1| flagellin C [Bacillus thuringiensis serovar morrisoni]
gi|189176220|gb|ACD81656.1| flagellin C [Bacillus thuringiensis serovar morrisoni]
Length = 44
Score = 46.3 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAA 45
I TN +M+A Q L + + V + +++G +++ A+DN A
Sbjct: 3 IGTNFLSMNARQSLYENEKRMNVAMEHLATGKKLNHASDNPA 44
>gi|188527101|ref|YP_001909788.1| flagellar hook-associated protein FlgL [Helicobacter pylori Shi470]
gi|188143341|gb|ACD47758.1| flagellar hook-associated protein FlgL [Helicobacter pylori Shi470]
Length = 828
Score = 46.3 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 19/170 (11%), Positives = 53/170 (31%), Gaps = 3/170 (1%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
+ + M T K K+ T +I +++ +L+ + ++A S +
Sbjct: 77 DKALQEFSKTMETFKTKLIQSANDVHSETSRVAIANDLERLREHMMNVANTSIGGEFLFG 136
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
+ + G+ + + Y + + + L + D
Sbjct: 137 GSKVDRPPIDSEGKYHGNGEDLNALISSDNLVPYNISGQDLFLGADKDKH 186
>gi|291562057|emb|CBL40873.1| Flagellin and related hook-associated proteins [butyrate-producing
bacterium SS3/4]
Length = 373
Score = 46.3 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 41/358 (11%), Positives = 107/358 (29%), Gaps = 5/358 (1%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
L D+ NL ++VS+G AADN + + M + S +G +++
Sbjct: 15 SLNDLQSNLNKSMNKVSTGAAYETAADNPLAYYQGKKMDHLYQDAKSKSSILGDIKNRLY 74
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTDS--KSIQSEITQLQSQLRDIARGSSFNGENW 133
+ G +S K + ++ +S S+Q++ L ++ + + +++
Sbjct: 75 QQEQGARDIQKTLSNSKTSMQYLLDSSHNSSKTSVQTKRDALLQDVQSMVSNLNSQYQDF 134
Query: 134 LR---TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
D+ ++ S++ T++ + +T S ++
Sbjct: 135 YVYGGNDITTAPFSLSGDGKTLTYTHKYSDGTTKTVNMTMAYDTNNNTYSYHLSDDDLNN 194
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
+ + D+S + T + T + A + + +
Sbjct: 195 LVTAMREQGRVDIGYGDISNRQSLLDTYTGGLNMLTGLTSDSLNAMSDANAKDAVKAALE 254
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
P A + + + + + T S ++ +
Sbjct: 255 TTPVALLSRSVMACDNYINDTTTVDQFTDTMGSVLKDAANTEHTISTIYSDLGNKYSLVE 314
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI 368
T +++ T + + L + + + ++ L + FI
Sbjct: 315 TTKTRLDTLSDNLTEEYKDILGADPYEAITEMFSYQYSYSAALKMGSNLMQSSLFDFI 372
Score = 39.3 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 34/359 (9%), Positives = 79/359 (22%), Gaps = 4/359 (1%)
Query: 81 MSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGS 140
M + ++ + + D +
Sbjct: 1 MRVVRSSVYRRYTSSLNDLQSNLNKSMNKVSTGAAYETAADNPLAYYQGKKMDHLYQDAK 60
Query: 141 STASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
S +SI + + + G I L S+ + + + + + +
Sbjct: 61 SKSSILGDIKNRLYQQEQGARDIQKTLSNSKTSMQYLLDSSHNSSKTSVQTKRDALLQDV 120
Query: 201 QVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPN 260
Q + S Y A S + + T V + A N
Sbjct: 121 QSMVSNLNSQYQDFYVYGGNDITTAPFSLSGDGKTLTYTHKYSDGTTKTVNMTMAYDTNN 180
Query: 261 TTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDT 320
T S G DI + D + +
Sbjct: 181 NTYSYHLSDDDLNNLVTAMREQGRVDIGYGDISNRQSLLDTYTGGLNMLTGLTSDSLNAM 240
Query: 321 ESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFI--DTQIK--CAT 376
E + + + + + + D +
Sbjct: 241 SDANAKDAVKAALETTPVALLSRSVMACDNYINDTTTVDQFTDTMGSVLKDAANTEHTIS 300
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
+G+ S + + + + D + + ++ AD T + + Q A++
Sbjct: 301 TIYSDLGNKYSLVETTKTRLDTLSDNLTEEYKDILGADPYEAITEMFSYQYSYSAALKM 359
>gi|22127320|ref|NP_670743.1| flagellar hook-associated protein FlgL [Yersinia pestis KIM 10]
gi|21960401|gb|AAM86994.1|AE013948_2 hypothetical [Yersinia pestis KIM 10]
Length = 308
Score = 46.3 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 18/180 (10%), Positives = 58/180 (32%)
Query: 1 MTSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGAL 60
M + T + + ++ + N LE + ++ + R++ +++ + + + +
Sbjct: 1 MMRVSTPTMSSTMNRFITQHNEKLEKINKQMMTQQRITLPSEDPIASTRLLQINREQANI 60
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
S I S+ + +S + +IK+ + + +K I +L L
Sbjct: 61 KQYSSNISGLSNSLTNQTGHVSAINKQLVSIKSSLVSINGNIKSNKDIAGVADELNYMLE 120
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ G + G+++ + + + + + +
Sbjct: 121 SVVAGLNAKNSEGRYLFAGTASNKQPITFDSAKNKYTYVGNSDNRQTGVGEGVKITENVH 180
>gi|189339495|gb|ACD89106.1| flagellin [Bacillus thuringiensis serovar kumamotoensis]
Length = 44
Score = 46.3 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAA 45
I TN +M+A Q L + + V + +++G +++ A+DN A
Sbjct: 3 ISTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNHASDNPA 44
>gi|113734872|dbj|BAF30754.1| flagellin [Campylobacter lari]
gi|113734876|dbj|BAF30757.1| flagellin [Campylobacter lari]
gi|113734888|dbj|BAF30766.1| flagellin [Campylobacter lari]
Length = 249
Score = 46.3 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 43/124 (34%), Gaps = 5/124 (4%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
L + E + +++ + + + A +IA ++S + +
Sbjct: 14 YLNQAQKSQEKALENIAAIRAIDGS--DGANLAIADSLRSQYSTIDQGILNAYDSIGVLQ 71
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGEN 132
IA + ++ + + SE ++L + + D ++FNG+N
Sbjct: 72 IADSTLNNISATADKLNELSVRSNNAALNDRQKSMLNSEASKLVTSINDAFSNATFNGKN 131
Query: 133 WLRT 136
++
Sbjct: 132 VFQS 135
>gi|189339441|gb|ACD89077.1| flagellin [Bacillus thuringiensis serovar monterrey]
Length = 44
Score = 46.3 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAA 45
I TN +M+A Q L + + V + +++G ++++A+DN A
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNNASDNPA 44
>gi|189164094|gb|ACD77154.1| flagellin C [Bacillus thuringiensis serovar kenyae]
gi|189339457|gb|ACD89085.1| flagellin [Bacillus thuringiensis serovar kenyae]
Length = 45
Score = 46.3 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAA 45
I TN + +A Q L + + V + +++G +++ A+DN A
Sbjct: 3 IGTNVLSRNARQSLYENEKRMNVSMEHLATGKKLNHASDNPA 44
>gi|237752753|ref|ZP_04583233.1| flagellar hook-associated protein FlgL [Helicobacter winghamensis
ATCC BAA-430]
gi|229376242|gb|EEO26333.1| flagellar hook-associated protein FlgL [Helicobacter winghamensis
ATCC BAA-430]
Length = 876
Score = 46.3 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 22/173 (12%), Positives = 53/173 (30%), Gaps = 4/173 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ +L V +++ GL++ N++ ++ + + L+
Sbjct: 3 IGTSSRYTMMQYNQNKTMNSLSNVLAQMN-GLKIQYGYQNSSIFNKTLSLDFNINTLTQS 61
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLR 120
+ + +S+ M K K+ G + +I ++ ++
Sbjct: 62 KELANNALTFTKHTDTALSELAKSMDNFKTKLVQGANDIHNETSRLAIAKDLRAIRDHFL 121
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE 173
IA S + T S + S G+ ++ Y +
Sbjct: 122 SIANTSIGGEYIFGGTATTKSPFNADGSYNGNSDVLSALLGSNNSLPYNITGS 174
Score = 44.3 bits (102), Expect = 0.035, Method: Composition-based stats.
Identities = 28/263 (10%), Positives = 59/263 (22%), Gaps = 5/263 (1%)
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
+L N + Y L+ ++ L+ A
Sbjct: 615 VPILQANGNPPQVSGDPTGANDVTYQQLADTLGMVLNLSNSNPGDLQNVFDQNADFNDPA 674
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
A + + T +T+ N + G +
Sbjct: 675 NKSAYEAMLGNAKHNVNITLDVNGALQIKDLHRTPTRMEFSLYDSTSDNYTLNAQGRIDG 734
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ + + ++ + + ++ +
Sbjct: 735 SRPALTFQANSAVVADDPHINFFQQIDQMIEALEVGSYRPGGTNTYGDAMRNPGVQNAIL 794
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
D K GS + + +++ + +D D A + S L
Sbjct: 795 AFDHLADHVNKVHTKNGSQGNAFEYSIERTEVLIVQAKTLRSDTIDTDFAEAYLQFSTLS 854
Query: 427 TQQQLAVQALSIVNNSTARILSL 449
Q LS V+ T LSL
Sbjct: 855 MGYQA---MLSSVSKITQ--LSL 872
>gi|23200555|dbj|BAC16348.1| flagellin [Borrelia valaisiana]
Length = 200
Score = 46.3 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRD 121
+ + + +++ V+ +K D SIQ EI QL ++
Sbjct: 1 RKTSKAINFIQTTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINR 60
Query: 122 IARGSSFNGENWLRTDLGSSTASIAK 147
IA + +N + L + A+
Sbjct: 61 IADQAQYNQMHMLSNKSAAQNVKTAE 86
>gi|170022977|ref|YP_001719482.1| flagellin domain-containing protein [Yersinia pseudotuberculosis
YPIII]
gi|169749511|gb|ACA67029.1| flagellin domain protein [Yersinia pseudotuberculosis YPIII]
Length = 255
Score = 45.9 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 53 MKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITA---GVERGTDSKSIQ 109
M+ + I + + IA G+++++ ++ +K T D ++IQ
Sbjct: 1 MEKFLNSAGQAKQNIQESIAMLQIADGGLAESVKTLNAMKKLATQAANDTNSAADREAIQ 60
Query: 110 SEITQLQSQLRDIARGSSFNGENWLRTDLGSS 141
E ++L +L++ + +N E
Sbjct: 61 KEFSELGKELQNALNNTEYNSEKLFADGGKMR 92
>gi|296274001|ref|YP_003656632.1| flagellar hook-associated protein FlgL [Arcobacter nitrofigilis DSM
7299]
gi|296098175|gb|ADG94125.1| flagellar hook-associated protein FlgL [Arcobacter nitrofigilis DSM
7299]
Length = 372
Score = 45.9 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 38/364 (10%), Positives = 112/364 (30%), Gaps = 6/364 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T+ S + L + Q S+ ++ D +D++ +S ++ +
Sbjct: 2 INTDRSTLYRLDMLNQQQLRVSYQQ---STQKKIDDGSDDSVVYSQQLFLEDKINVYDGL 58
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLR 120
+ +++ ++ + + + IK++I KSI ++I + L
Sbjct: 59 KTQVQNTTAQNKVSDSTLDAIKKQLDEIKDEIIKGRNDTNDEISRKSIATQIEGAKKNLY 118
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + + ++ + + S+ + + +D Y D LD
Sbjct: 119 TLVNERVQDEYIFSGSETNKQAFTQDANGKVSYNGNTTLRKSAVEVDSYRDRGVTGLDIM 178
Query: 181 TDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFD 240
+ T + E + ++ +A+ T+ + + ++ +++
Sbjct: 179 SYTTTAGVSGQPLSFKEGERIIDENGREWKLNAAQTVLVEYDEDGKSTKNFIEVKTTGEA 238
Query: 241 QAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSD 300
K +P + T+ + + A A G+ + N+ +
Sbjct: 239 PNKVHEIAELPKNEDGSQKTFTAKHNTFDAIDDAIKALRNNDGDGMSAALESLNNAWNAA 298
Query: 301 PGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLA 360
A+ + + +T L + D+ ++ + +
Sbjct: 299 NTAHGELGARNATFNAAEERITTKTTHFGVLAIQNDAADMTKVAIESQQLQLIYTSLYSS 358
Query: 361 MEEM 364
+ +
Sbjct: 359 ISKA 362
>gi|326386937|ref|ZP_08208551.1| flagellar hook-associated protein FlgL [Novosphingobium
nitrogenifigens DSM 19370]
gi|326208617|gb|EGD59420.1| flagellar hook-associated protein FlgL [Novosphingobium
nitrogenifigens DSM 19370]
Length = 307
Score = 45.9 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 89/283 (31%), Gaps = 3/283 (1%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+++Q+L + VQ +S+G + S A+ + S +++ + A + + + +
Sbjct: 14 NSAQQLASLQSQANDVQTSISTGSKFSTASQDPLAASQMRMLSLQDNAATVDAASASKAT 73
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSF 128
+ + +A + M++ ++ ++ + T T+ SI +E+ Q+ + L +A
Sbjct: 74 TDLKLADSAMTQMVNDIARAQQLATQAANGALSDTERASIGNELAQIHTDLVGLANSRDS 133
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
+G ++ S ++ + + + + +
Sbjct: 134 DGNALFGGGAQGKAYTLDASGNATYAGNAQAQSLSIGGGQSVQRSVTGPEMLSFKDSSGN 193
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI 248
D +K LK A+ T T +
Sbjct: 194 TTDLLTVVKSLADTLKAGGTGSQAAANGALTSLSTALDTMSTAQTVVGSRESWIALNTQN 253
Query: 249 PVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
+ A A +T G + + ++ + S
Sbjct: 254 QTAMNEARAKTESTVGDTDVSAAAIKLQQLTTALQASQASFMR 296
>gi|281186252|gb|ADA54891.1| FlaD [Vibrio harveyi]
gi|281186254|gb|ADA54892.1| FlaD [Vibrio harveyi]
Length = 175
Score = 45.9 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 13/166 (7%), Positives = 40/166 (24%)
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
+ + + + + ++ + +
Sbjct: 10 MLTLKDMRSDNRMMGGTSYVATEGKDKDWKVQAGANDITFTLKDIDGNDQTITVNAKEGD 69
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
+ T G T+ A V + +G + +
Sbjct: 70 DIEEVATYINGQTDMVKASVNEKGQLQIFAGNNKVTGDVAFSGGLAGALNMQAGTAETVD 129
Query: 352 TDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
T ++ V+ ID+ +K + ++G+ +R + +
Sbjct: 130 TIDVTSVGGAQQSVAVIDSALKYVDSHRAELGAFQNRFNHAISNLD 175
>gi|309779454|ref|ZP_07674215.1| flagellar hook-associated protein 3 [Ralstonia sp. 5_7_47FAA]
gi|308921695|gb|EFP67331.1| flagellar hook-associated protein 3 [Ralstonia sp. 5_7_47FAA]
Length = 319
Score = 45.9 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 23/242 (9%), Positives = 67/242 (27%), Gaps = 3/242 (1%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+++ NL +Q +++SG+ ++ A DN + + ++ A +++
Sbjct: 15 SMQNTQSNLLTLQQQIASGIALTSAGDNPSAFGQMAQLQQTQDANDQYQSNRDTTDARLT 74
Query: 76 IAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ ++ + + K + + + + +++ Q QL A G
Sbjct: 75 SVSSALTNLVTTLQQGKQTLVGANTSLMTESQRVGVLAQVKQQYQQLLSTANQRDAAGVA 134
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
G++ ++ V + + +
Sbjct: 135 LFGGANGTTDPFTNTGGSVQYVGSGQPPVVQVSQNISMPNSVSGDSVFVRIPNSDASNPN 194
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
++ + +S + T +T L + + A
Sbjct: 195 ANQSVFKTYEKLITALSTPINAATQATDVANLQKAVQTAQGNLDNAYQVALQAQVTVGTQ 254
Query: 253 PA 254
A
Sbjct: 255 QA 256
Score = 36.3 bits (81), Expect = 9.8, Method: Composition-based stats.
Identities = 20/164 (12%), Positives = 47/164 (28%)
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
+ T + ++ + NS S ++
Sbjct: 139 ANGTTDPFTNTGGSVQYVGSGQPPVVQVSQNISMPNSVSGDSVFVRIPNSDASNPNANQS 198
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRI 389
++ T TD N + A++ +D + A A +G+ +++
Sbjct: 199 VFKTYEKLITALSTPINAATQATDVANLQKAVQTAQGNLDNAYQVALQAQVTVGTQQAQL 258
Query: 390 HLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ +++ + +L D S ++ S Q Q A
Sbjct: 259 TTLNSSGSNYGEQLKEQISKLQSVDYTSAISQFSQQQVSLQAAQ 302
>gi|294459463|gb|ADE75404.1| flagellin type III [Burkholderia pseudomallei]
Length = 243
Score = 45.9 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 13/108 (12%), Positives = 35/108 (32%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ T +T+ S D + +N + + + + + + ID +
Sbjct: 136 FQTLALSTSATSALSATDQANATAMVAQINAVNKPQTVSNLDISTQTGAYQAMVSIDNAL 195
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+G+ +R + + + + ++ AD A E+
Sbjct: 196 ATVNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSADFAQETA 243
>gi|296535725|ref|ZP_06897892.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296263938|gb|EFH10396.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 246
Score = 45.5 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 25/59 (42%)
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
A ++ Q D + +G L D D+ E++RL ALQ +QQLA
Sbjct: 168 AVDEARDSFTLERRQVEAQLAMNLERLDHENEAMGALEDTDLTKEASRLQALQIRQQLA 226
>gi|90418363|ref|ZP_01226275.1| putative flagellar hook-associated protein [Aurantimonas
manganoxydans SI85-9A1]
gi|90338035|gb|EAS51686.1| putative flagellar hook-associated protein [Aurantimonas
manganoxydans SI85-9A1]
Length = 352
Score = 45.5 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 42/133 (31%)
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
S + D+E+ + + + V ++ D +L
Sbjct: 206 WDMWSKADSSPVVNRISDSETLDVSYPASDEAFRNIVKAYVMISDLGAKTMDESQRQLLT 265
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
V + + T +IG SR+ + + + ++ + + D D STR
Sbjct: 266 SRAVETLSLGLSQLTEIRAEIGGKQSRLEITNETLGTRKNVLTMSISSFEDVDAYEASTR 325
Query: 422 LSALQTQQQLAVQ 434
++ L + +
Sbjct: 326 VTTLTNLLEASYA 338
>gi|238799423|ref|ZP_04642852.1| Flagellar hook-associated protein 3 [Yersinia mollaretii ATCC
43969]
gi|238716727|gb|EEQ08614.1| Flagellar hook-associated protein 3 [Yersinia mollaretii ATCC
43969]
Length = 320
Score = 45.5 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 56/175 (32%), Gaps = 6/175 (3%)
Query: 11 MSASQKLRDINYNLE---VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q ++ + ++S+G RV + +D+ S A ++ S + A
Sbjct: 1 MIYQQTMQGVTNAQSLWMQSGQQLSTGKRVVNPSDDPMAASQAVMVSQSQSENSQYTLAR 60
Query: 68 GLGSSKVDIAKAGMSKA---IDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIAR 124
+++ + + I + +I + + D S +++ L+ QL + A
Sbjct: 61 SFARNELSQETKTLEQVTSTIQSIQSIIISAKSDILSDDDRASYATQLQGLKDQLLNQAN 120
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
++ +G + + + + ++ S
Sbjct: 121 STNGSGRYTFAAFKSDKPPFVVSATGAVTYQGGDVAIEQKVDASREMTIGHTGSS 175
>gi|189339475|gb|ACD89096.1| flagellin [Bacillus thuringiensis serovar toumanoffi]
Length = 44
Score = 45.5 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAA 45
I TN +M+A Q L + + V + + +G +++ A+DN A
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLVTGKKLNTASDNPA 44
>gi|121586264|ref|ZP_01676054.1| hook associated protein [Vibrio cholerae 2740-80]
gi|121549530|gb|EAX59556.1| hook associated protein [Vibrio cholerae 2740-80]
Length = 168
Score = 45.5 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 12/103 (11%), Positives = 30/103 (29%)
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + ++V T IG+ S + +Q
Sbjct: 53 TTFSVFDTFRDAIRYAEGSVSDASNTAKLHQLVEEFHTAFIHLNKTRTDIGARLSTLDIQ 112
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
E+ + + ++ K D D A + + + +A
Sbjct: 113 EEQHEDFKISLAKSKSTFEDLDYAEAVIEFNENSRALEASQKA 155
>gi|294510245|gb|ADE75405.1| flagellin type IV [Burkholderia pseudomallei]
Length = 243
Score = 45.5 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 11/108 (10%), Positives = 34/108 (31%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ +T+ + D + +N + + + + + + ID +
Sbjct: 136 FQTLALSASATSALTATDQANATAMVAQINAVNKPQTVSNLDISTQTGAYQAMVSIDNAL 195
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+G+ +R + + + + ++ AD A E+
Sbjct: 196 ATVNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSADFAQETA 243
>gi|294459459|gb|ADE75402.1| flagellin type I [Burkholderia pseudomallei]
gi|294459461|gb|ADE75403.1| flagellin type II [Burkholderia pseudomallei]
Length = 243
Score = 45.5 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 13/108 (12%), Positives = 35/108 (32%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ T +T+ S D + +N + + + + + + ID +
Sbjct: 136 FQTLALSTSATSALSATDQANATAMVAQINAVNKPQTVSNLDISTQTGAYQAMVSIDNAL 195
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASEST 420
+G+ +R + + + + ++ AD A E+
Sbjct: 196 ATVNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSADFAQETA 243
>gi|258626882|ref|ZP_05721687.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258580838|gb|EEW05782.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 185
Score = 45.5 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 13/169 (7%), Positives = 38/169 (22%)
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
S + + + + + + + +
Sbjct: 4 NPDDTSSYRITFVDMPDGKNGYQLERNGSVVQAGEFDPKTGIQFEELNIQVKGQITKGDA 63
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + + + ++V T IG+
Sbjct: 64 IDLTPRDTFSVFDTFRDAIRYAEGSVSDASNTAKLHQLVEEFHTAFIHLNKTRTDIGARL 123
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
S + +QE+ + + ++ K D D A + + +A
Sbjct: 124 STLDIQEEQHEDFKISLAKSKSTFEDLDYAEAVIEFNENSRALDASQKA 172
>gi|255017525|ref|ZP_05289651.1| flagellin [Listeria monocytogenes FSL F2-515]
Length = 49
Score = 45.5 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 22/47 (46%)
Query: 404 EKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLF 450
+ + DADMA+E + ++ + Q ++ LS N + + L
Sbjct: 1 KASASSIEDADMAAEMSEMTKYKILTQTSISMLSQANQTPQMLTQLI 47
>gi|2271021|gb|AAC01551.1| hook-associated protein [Vibrio cholerae]
Length = 150
Score = 45.5 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 12/103 (11%), Positives = 30/103 (29%)
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQ 392
+ + + + ++V T IG+ S + +Q
Sbjct: 35 TTFSVFDTFRDAIRYAEGSVSDASNTAKLHQLVEEFHTAFIHLNKTRTDIGARLSTLDIQ 94
Query: 393 EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
E+ + + ++ K D D A + + + +A
Sbjct: 95 EEQHEDFKISLAKSKSTFEDLDYAEAVIEFNENSRALEASQKA 137
>gi|189339491|gb|ACD89104.1| flagellin [Bacillus thuringiensis serovar neoleonensis]
Length = 44
Score = 45.1 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAA 45
I TN +M+A Q L + + V + +++G ++++A+DN A
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLTTGKKLNNASDNPA 44
>gi|238782799|ref|ZP_04626828.1| Flagellin and hook-associated protein [Yersinia bercovieri ATCC
43970]
gi|238716222|gb|EEQ08205.1| Flagellin and hook-associated protein [Yersinia bercovieri ATCC
43970]
Length = 278
Score = 45.1 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 22/185 (11%), Positives = 54/185 (29%), Gaps = 4/185 (2%)
Query: 30 RVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
R+S+ + +D+ A S A I ++ ++ A ++ +S ++++
Sbjct: 2 RLSAQRNLLTPSDDPAGASQAIIYQNALSNINQFDTARLYAQDALEQEDNVLSSVGNILT 61
Query: 90 TIKNKIT----AGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
++ D ++ +E+ ++ L D+A + NG S
Sbjct: 62 KNLSEKIIAAGNDTHSDADRAALATELQGIRDNLLDLANSKNSNGRFIFAGFKTGSEPFQ 121
Query: 146 AKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKD 205
V +T + + + T L + D
Sbjct: 122 KDGSYVGGDTPPTQIVADSTEMQVGHIGSDVFMTGTSDDIFAALDSAIAALNTPIVDDAD 181
Query: 206 IDVSV 210
+
Sbjct: 182 REALH 186
>gi|238785490|ref|ZP_04629473.1| Flagellar hook-associated protein 3 [Yersinia bercovieri ATCC
43970]
gi|238713592|gb|EEQ05621.1| Flagellar hook-associated protein 3 [Yersinia bercovieri ATCC
43970]
Length = 320
Score = 45.1 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 21/181 (11%), Positives = 57/181 (31%), Gaps = 6/181 (3%)
Query: 11 MSASQKLRDINYNLE---VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
M Q ++ ++ ++S+G RV + +D+ S A ++ + + A
Sbjct: 1 MIYQQTMQGVSTAQSLWMQSGQQLSTGKRVVNPSDDPMAASQAVMVSQSQSENNQYTLAR 60
Query: 68 GLGSSKVDIAKAGMSKA---IDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIAR 124
+++ + + I + +I + V D S +++ L+ QL + A
Sbjct: 61 SFARNELSQETKTLEQVTSTIQSIQSIIISAKSDVLSDDDRASYATQLQGLKDQLLNQAN 120
Query: 125 GSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGT 184
++ +G + + + + ++ S
Sbjct: 121 STNGSGRYAFAAFKSDKPPFVVSATGEVTYQGGDVAIEQKVDASRSMTIGHTGTSVFMAL 180
Query: 185 E 185
Sbjct: 181 T 181
>gi|300854146|ref|YP_003779130.1| putative flagellin-ascociated protein [Clostridium ljungdahlii
DSM 13528]
gi|300434261|gb|ADK14028.1| putative flagellin-ascociated protein [Clostridium ljungdahlii
DSM 13528]
Length = 73
Score = 45.1 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 23/79 (29%), Gaps = 15/79 (18%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I N A +A + + + N +I++ M+ L+
Sbjct: 3 INHNLMANNAIRNMNINSNNASKSY---------------VTGLAISEKMRGQINRLNQT 47
Query: 64 SDAIGLGSSKVDIAKAGMS 82
S G S V + +
Sbjct: 48 SFNAQDGISMVQTDEGALE 66
>gi|291287567|ref|YP_003504383.1| flagellin domain protein [Denitrovibrio acetiphilus DSM 12809]
gi|290884727|gb|ADD68427.1| flagellin domain protein [Denitrovibrio acetiphilus DSM 12809]
Length = 245
Score = 44.7 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 9/94 (9%), Positives = 26/94 (27%), Gaps = 3/94 (3%)
Query: 43 NAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG 102
NA ++ + + + S + +S ++ +++ +
Sbjct: 37 NAVDNAVLVRLNTAYNENYQQARNAQDSISYMQTRDGALSSVNGMLQDLRDLAVSMGNPI 96
Query: 103 TDSKSIQSEITQ---LQSQLRDIARGSSFNGENW 133
+ + Q + + A S FN
Sbjct: 97 LNESDKELIAGQANSIMQGIESFASSSEFNSHQI 130
Score = 39.3 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 7/49 (14%), Positives = 18/49 (36%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ +S ID+ I + G+ S ++ + D + + +
Sbjct: 145 DFGSDGTLSAIDSAISSVVGKRAETGASISTLNARIDNLTNTNINLAEA 193
>gi|253990120|ref|YP_003041476.1| flagellar hook-associated protein FlgL [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253781570|emb|CAQ84733.1| flagellar hook-associated protein 3 (hap3) (hook-filament junctio
protein) [Photorhabdus asymbiotica]
Length = 321
Score = 44.7 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 21/200 (10%), Positives = 53/200 (26%), Gaps = 3/200 (1%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ TN + ++SSG +V + +D+ S ++
Sbjct: 3 VSTNVLYDQKMVSITTAQSKWMQQGAQLSSGQKVINPSDDPMAASQGVMVAQAESQNQQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL---QSQLR 120
A + + + + +SK + V+ + + A V + S QL + QL
Sbjct: 63 MTARSFAKNSMSMQLSVVSKVVGVVQNVHESLVATVNGVLSDEDRNSLAIQLEGFKEQLV 122
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
++ + NG + ++ +
Sbjct: 123 NLGNTTDGNGRYIFAGYKTDVKPFDESKSGAVSYQGGYQELTQKVDSNRAMIIGHTGEQV 182
Query: 181 TDGTERYGLLDRNHKIKVEP 200
+ + + +
Sbjct: 183 FLSSTSNPVKEPDGNPSESD 202
>gi|213612409|ref|ZP_03370235.1| flagellin [Salmonella enterica subsp. enterica serovar Typhi str.
E98-2068]
Length = 28
Score = 44.7 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 11/28 (39%)
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q QQ L+ N +LSL R
Sbjct: 1 RAQILQQAGTSVLAQANQVPQNVLSLLR 28
>gi|289548870|ref|YP_003473858.1| flagellar hook-associated protein 3 [Thermocrinis albus DSM 14484]
gi|289182487|gb|ADC89731.1| flagellar hook-associated protein 3 [Thermocrinis albus DSM 14484]
Length = 388
Score = 44.7 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 24/207 (11%), Positives = 50/207 (24%), Gaps = 9/207 (4%)
Query: 19 DINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAK 78
+ LE VS+G +V +D +K + LS S + +
Sbjct: 18 KVRRQLEDKILEVSTGRKVRSISDEPNVTFNVISLKKEVAQLSQYSKNRLFSDTYLAYTD 77
Query: 79 AGMSKAIDVMSTIKNKITAGVERG-----TDSKSIQSEITQLQSQLRD----IARGSSFN 129
+ K D++ + + + L++ L + + F+
Sbjct: 78 FTLGKMEDLLKGAYSNVVRAKNSATLTPQELKATADGMYATLKALLDRANDKLGQVFVFS 137
Query: 130 GENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGL 189
G + R +T S + + T + T S
Sbjct: 138 GTDLERRPFDETTLDYVASPQDFQVWISDSTSIPTVLSGGEVFYTSSTLSKATYLSPTQS 197
Query: 190 LDRNHKIKVEPQVLKDIDVSVYDASGT 216
+ I +
Sbjct: 198 FTSSGTITITVGATTVNISYGAQNQPQ 224
Score = 41.3 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 26/67 (38%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
+ I+ +A K+GS+ + + +D + D ++ L DAD+ +
Sbjct: 305 LFLIERSYSTVSAWRAKVGSVLAVVRNMQDLQENSMDILQARKSDLEDADLPQSVLEYTR 364
Query: 425 LQTQQQL 431
+ +
Sbjct: 365 YRIAYEA 371
>gi|313681373|ref|YP_004059111.1| flagellin domain protein [Sulfuricurvum kujiense DSM 16994]
gi|313154233|gb|ADR32911.1| flagellin domain protein [Sulfuricurvum kujiense DSM 16994]
Length = 248
Score = 44.7 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 65/195 (33%), Gaps = 5/195 (2%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+A ++ N + +++++ V ++++ +IA +M++ +LS G
Sbjct: 8 NALPQMNTETSNRDKTLEKIAT--AVELKLEDSSSRTIADMMQNQISSLSQGLMNANDGI 65
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSF 128
+ + IA +S D T+ + D +++ S+ + S +++I +S+
Sbjct: 66 AMLQIADGALSSLSDQTQTLNDLSVRNNSAILNSADKQALNSQFQRTLSSMQNIVNTTSY 125
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
NG + S S + + + S
Sbjct: 126 NGNPLFNNNFSISIGEGTLSASIANVSPKGLSIDNQEGINQYAQTLASAQSDVGSATNNF 185
Query: 189 LLDRNHKIKVEPQVL 203
+ N ++
Sbjct: 186 ISSTNVLLQQITDTA 200
>gi|222833047|gb|EEE71524.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 44.7 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 28/73 (38%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ +D + A G +R ED +K D E R D DM + +
Sbjct: 133 LNELDAGMSRVQAMRSFAGDQLNRADRLEDDMKNQADQQEAARSRAEDIDMIKALSDVDM 192
Query: 425 LQTQQQLAVQALS 437
+ Q A+Q+ +
Sbjct: 193 QKVGMQAALQSYA 205
>gi|222823578|ref|YP_002575152.1| flagellin [Campylobacter lari RM2100]
gi|222425507|dbj|BAH20701.1| flagellin [Campylobacter lari]
gi|222538800|gb|ACM63901.1| flagellin [Campylobacter lari RM2100]
Length = 249
Score = 44.7 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 41/124 (33%), Gaps = 5/124 (4%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
L + E + +++ + + A +IA ++S + +
Sbjct: 14 YLNQAQKSQEKALENIAAIRAID--GTDGANLAIADSLRSQYSTIDQGILNAYDSVGVLQ 71
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGEN 132
IA + ++ + + +E +L S + D +++NG+N
Sbjct: 72 IADSTLNNISATADRLNELSVRSNSAALNDRQKSMLNAEANRLVSSINDAFSNATYNGKN 131
Query: 133 WLRT 136
++
Sbjct: 132 VFQS 135
>gi|189164130|gb|ACD77172.1| flagellin C [Bacillus thuringiensis serovar novosibirsk]
Length = 44
Score = 44.3 bits (102), Expect = 0.035, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAA 45
I TN +M+A Q L + + V +++G +++DA+DN A
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMGHLATGKKLNDASDNPA 44
>gi|238758103|ref|ZP_04619283.1| Flagellar hook-associated protein 3 [Yersinia aldovae ATCC 35236]
gi|238703641|gb|EEP96178.1| Flagellar hook-associated protein 3 [Yersinia aldovae ATCC 35236]
Length = 188
Score = 44.3 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 50/144 (34%), Gaps = 6/144 (4%)
Query: 8 HSAMSASQKLRDINYNLE---VVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
++M Q ++ + ++S+G RV + +D+ S A ++ S +
Sbjct: 4 STSMLYQQNMQGVTNAQSLWMQSGQQLSTGKRVVNPSDDPMSASQAVMVSQAESENSQYA 63
Query: 65 DAIGLGSSKVDIAKAGMSKA---IDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
A + +++A I + +I + + D S +++ L+ QL +
Sbjct: 64 LARSFARQSSSLETTVLAQATSTIQSIQSIIISAKSDILSDDDRASYATQLQGLKDQLVN 123
Query: 122 IARGSSFNGENWLRTDLGSSTASI 145
A + NG
Sbjct: 124 QANTTDGNGRYIFGGFKSDKPPFA 147
>gi|207111049|ref|ZP_03245211.1| flagellin B [Helicobacter pylori HPKX_438_CA4C1]
Length = 68
Score = 44.3 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Query: 58 GALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQ 114
L V A M + I ++ TIK K + G +++QS+I +
Sbjct: 1 ANLGQAIRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQR 60
Query: 115 LQSQLRDI 122
L +L +I
Sbjct: 61 LLEELDNI 68
>gi|222425501|dbj|BAH20698.1| flagellin [Campylobacter lari]
gi|222425503|dbj|BAH20699.1| flagellin [Campylobacter lari]
gi|222425505|dbj|BAH20700.1| flagellin [Campylobacter lari]
Length = 249
Score = 44.3 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 41/124 (33%), Gaps = 5/124 (4%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
L + E + +++ + + A +IA ++S + +
Sbjct: 14 YLNQAQKSQEKALENIAAIRAID--GTDGANLAIADSLRSQYSTIDQGILNAYDSVGVLQ 71
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGEN 132
IA + ++ + + +E +L S + D +++NG+N
Sbjct: 72 IADSTLNNISATADRLNELSVRSNSAALNDRQKSMLNTEANRLVSSINDAFSNATYNGKN 131
Query: 133 WLRT 136
++
Sbjct: 132 VFQS 135
>gi|51848575|dbj|BAD38984.1| flagellin [Borrelia afzelii]
Length = 199
Score = 44.0 bits (101), Expect = 0.046, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 3/85 (3%)
Query: 66 AIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK---SIQSEITQLQSQLRDI 122
+ + + +++ V+ +K SIQ EI QL ++ I
Sbjct: 1 NTSKAINXIQTTEGNLNEVEKVLVRMKEFAXQSGNGTYSDSDXGSIQIEIEQLTDEINRI 60
Query: 123 ARGSSFNGENWLRTDLGSSTASIAK 147
A + +N + L S A+
Sbjct: 61 ADQAQYNQMHMLSNKSASQNVKTAE 85
>gi|83594622|ref|YP_428374.1| hypothetical protein Rru_A3292 [Rhodospirillum rubrum ATCC 11170]
gi|83577536|gb|ABC24087.1| hypothetical protein Rru_A3292 [Rhodospirillum rubrum ATCC 11170]
Length = 260
Score = 44.0 bits (101), Expect = 0.048, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
V+ +D A G+ +S + + DF + +RD +E G LV++D+ +
Sbjct: 174 SVASVDAARAQIRDTAASFGTSASALSTRADFTQTLRDTLETGAAGLVESDLNRDGAEAL 233
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLF 450
AL T+ +LA +LSI S + LF
Sbjct: 234 ALDTRTRLAASSLSIAAGSERAVTQLF 260
>gi|260888400|ref|ZP_05899663.1| bacterial flagellin family protein [Selenomonas sputigena ATCC
35185]
gi|330838285|ref|YP_004412865.1| flagellin domain protein [Selenomonas sputigena ATCC 35185]
gi|260861936|gb|EEX76436.1| bacterial flagellin family protein [Selenomonas sputigena ATCC
35185]
gi|329746049|gb|AEB99405.1| flagellin domain protein [Selenomonas sputigena ATCC 35185]
Length = 274
Score = 44.0 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 19/193 (9%), Positives = 58/193 (30%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
+ L IN+ + ++SSG + A + ++I M ++ A+S
Sbjct: 9 LIQHSTLNRINHTSNNLARQISSGTKHPSAVFGPSAYAIDMRMNANIAAVSQSDVNSQRT 68
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
++ + A+ G+S +++ + ++ + + + + + +
Sbjct: 69 NAMLKTAEGGVSSSVEALGQLQQTLLNAANGTNSDSDRRDLGKMVDQTIATLNDNAGIQY 128
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
D S + S + + + T+ L + + +
Sbjct: 129 NGMNLLDGSKSANVASLDGSTSITNLGDMRSSALGLTDANGKSTLNLGTDAGIADALDKV 188
Query: 191 DRNHKIKVEPQVL 203
++
Sbjct: 189 TTALNKTLDQATT 201
Score = 39.3 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 25/243 (10%), Positives = 57/243 (23%)
Query: 187 YGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIA 246
L+ + ++ + A
Sbjct: 7 NNLIQHSTLNRINHTSNNLARQISSGTKHPSAVFGPSAYAIDMRMNANIAAVSQSDVNSQ 66
Query: 247 TIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNS 306
L A +++ G ++ +A + + +I +
Sbjct: 67 RTNAMLKTAEGGVSSSVEALGQLQQTLLNAANGTNSDSDRRDLGKMVDQTIATLNDNAGI 126
Query: 307 TVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS 366
+ +LD + D S + L +T + + +
Sbjct: 127 QYNGMNLLDGSKSANVASLDGSTSITNLGDMRSSALGLTDANGKSTLNLGTDAGIADALD 186
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+ T + A IG+ R++ Q + + DMA ++
Sbjct: 187 KVTTALNKTLDQATTIGAAQQRLNYQSANFVTQEENLMAASTTSNGTDMAKAASEFKNSD 246
Query: 427 TQQ 429
TQQ
Sbjct: 247 TQQ 249
>gi|298529936|ref|ZP_07017338.1| flagellin domain protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298509310|gb|EFI33214.1| flagellin domain protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 274
Score = 44.0 bits (101), Expect = 0.054, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Query: 44 AAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG- 102
+I ++SD+ A+ S + + + IA + D + +++ E
Sbjct: 51 PFDQAITGRLRSDSAAIRQHSRNVQEAAQIMGIASEAVDSIRDTLKQMQDLAQKIDEGDL 110
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
+ + + +++ ++ I + +N +
Sbjct: 111 EYRQEVADDYNEMREKIESIISHTQYNTMHL 141
>gi|295703233|ref|YP_003596308.1| hypothetical protein BMD_1097 [Bacillus megaterium DSM 319]
gi|294800892|gb|ADF37958.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
Length = 44
Score = 44.0 bits (101), Expect = 0.055, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 13/37 (35%)
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + Q + LS N +L L R
Sbjct: 8 MAKEMMEQTKNSILSQASQAMLSQANQQPQGVLQLLR 44
>gi|307131602|ref|YP_003883618.1| flagellar hook-associated protein flgL [Dickeya dadantii 3937]
gi|306529131|gb|ADM99061.1| Flagellar hook-associated protein flgL [Dickeya dadantii 3937]
Length = 309
Score = 44.0 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 23/224 (10%), Positives = 62/224 (27%), Gaps = 2/224 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T+ + Q + D +++S RV +D+ S A ++
Sbjct: 3 LSTSIIFQQSMQGVTDGLSAFSKTGQQLASNTRVLTPSDDPIAASKAVMVNQAQAQNEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN--KITAGVERGTDSKSIQSEITQLQSQLRD 121
+ A + ++ + ++ +++ G + D + I + + L+SQL +
Sbjct: 63 ALARTFAENGMNSELSVLTNVATALTSASTTLLSADGTKNDNDRQLIATSLRGLKSQLLN 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+A + NG S + N + + +
Sbjct: 123 LANSTDGNGSYVFGGYKTDSQPFTTNASGTVSYVGGNQAISQQVDADRVMTVGHIGSDVF 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+ + + + ++T
Sbjct: 183 NNAGGTADIFGALDSVISALETPLEGATTAVKDANLATINAASQ 226
>gi|51597630|ref|YP_071821.1| flagellar hook-associated protein FlgL [Yersinia pseudotuberculosis
IP 32953]
gi|186896764|ref|YP_001873876.1| flagellar hook-associated protein FlgL [Yersinia pseudotuberculosis
PB1/+]
gi|51590912|emb|CAH22568.1| putative flagellar hook-associated protein [Yersinia
pseudotuberculosis IP 32953]
gi|186699790|gb|ACC90419.1| flagellar hook-associated protein 3 [Yersinia pseudotuberculosis
PB1/+]
Length = 307
Score = 43.6 bits (100), Expect = 0.061, Method: Composition-based stats.
Identities = 18/177 (10%), Positives = 58/177 (32%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + ++ + N LE + ++ + R++ +++ + + + +
Sbjct: 3 ISTPTMSSTMNRFITQHNGKLEKINKQMMTQQRITLPSEDPIASTRLLQINREQVNIKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
S I S+ + +S + +IK+ + + + +K I +L L +
Sbjct: 63 SSNISGLSNSLANQTGHVSAINKQLVSIKSSLLSINDSVKSNKDISGVADELNYMLESVV 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
G + G+++ + + + + + +
Sbjct: 123 AGLNAKNSEGRYLFAGTASNKQPITFDKTADKYTYVGNSDNRQTGVGEGVKITDNVH 179
>gi|298356978|emb|CBM40870.1| flagellin [Ralstonia pickettii]
Length = 157
Score = 43.6 bits (100), Expect = 0.062, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 38/109 (34%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + S L+ + + + IDT +
Sbjct: 49 NKLFDGSVTSTTFQYGQNAATDVTSVSNADLSTFGTLSGTSVTSTANATAAQAAIDTDLT 108
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
AA +G+ S ++ + + A+ L+D D ASE++ +
Sbjct: 109 NLKAARANLGAQQSGLNSTINTLTSNNTALSAAKSSLIDTDYASETSNM 157
>gi|313905161|ref|ZP_07838530.1| hypothetical protein EubceDRAFT_1245 [Eubacterium cellulosolvens 6]
gi|313470064|gb|EFR65397.1| hypothetical protein EubceDRAFT_1245 [Eubacterium cellulosolvens 6]
Length = 416
Score = 43.6 bits (100), Expect = 0.064, Method: Composition-based stats.
Identities = 40/419 (9%), Positives = 111/419 (26%), Gaps = 36/419 (8%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV- 74
++ ++ +L +V +G + S A ++ + + + + A I +++
Sbjct: 15 SVQQLHSDLNTTMQQVETGRKYSSAKESPLAYYSGKKLDNLYNDADAKDSIISSVKNRLY 74
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGTDS-KSIQSEITQLQSQLRDIARGSSFNGENW 133
+ ++ D+ + KN I + ++++ + +L+ IA +F EN+
Sbjct: 75 QQEQGALAIQSDMRTINKNLIYMQTDTANGRFTNVETYTKDFEQRLQSIANTMNFAYENF 134
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
T G D + + E+ + + +
Sbjct: 135 YVFGGNDETTVPFTLDPGIENGDADNPSYTLNFSHKFPGESDTVTTMSMKFTLDADTGEI 194
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
+V +D+D V S + + + + T+P
Sbjct: 195 QLDYSGKRVTRDVDGQVTHEENLDSDTSLNYILRAMEEEGRMSLGYGSLENRETLPDTFT 254
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
S + + + S
Sbjct: 255 GGLNMLTDISADGLKALVKKSGESAAKDEITRKLKECPIALTSKAIITSTR--------- 305
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ N + +++ D +
Sbjct: 306 -------------------------LINAKTRHSDDERQVKDNYTRDIGDVIGKWDECEQ 340
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ ++G + + + + +++D ++K + D T++ + Q Q A
Sbjct: 341 RISNTYRQLGMKQAFLEDTQTKLGIVKDTLQKQYDDTLGVDQYQAITKMYSQQYAYQAA 399
>gi|319443813|pdb|3PWX|A Chain A, Structure Of Putative Flagellar Hook-Associated Protein
From Vibrio Parahaemolyticus
gi|319443814|pdb|3PWX|B Chain B, Structure Of Putative Flagellar Hook-Associated Protein
From Vibrio Parahaemolyticus
Length = 239
Score = 43.6 bits (100), Expect = 0.065, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 37/106 (34%)
Query: 41 ADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE 100
+D+ ++ +N A++ I + + + + + + + ++ + G
Sbjct: 4 SDDPXASIKLLNLERENSAIAQYQSNIANLKTTLSSQETHLDSVSESLKSXRDIVLWGAN 63
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
+ IT+L+S I + E G+ T + A
Sbjct: 64 GSLTDQDRSGXITELKSYRDSIESSFNAQDEEGHFLFSGTKTDTAA 109
>gi|292489126|ref|YP_003532013.1| flagellar hook-associated protein 3 FlgL [Erwinia amylovora
CFBP1430]
gi|292900245|ref|YP_003539614.1| flagellar hook-associated protein 3 [Erwinia amylovora ATCC 49946]
gi|291200093|emb|CBJ47219.1| flagellar hook-associated protein 3 [Erwinia amylovora ATCC 49946]
gi|291554560|emb|CBA22167.1| Flagellar hook-associated protein 3 FlgL [Erwinia amylovora
CFBP1430]
gi|312173284|emb|CBX81539.1| Flagellar hook-associated protein 3 FlgL [Erwinia amylovora ATCC
BAA-2158]
Length = 302
Score = 43.6 bits (100), Expect = 0.066, Method: Composition-based stats.
Identities = 26/182 (14%), Positives = 62/182 (34%), Gaps = 4/182 (2%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + + + + + R+S+G + A+DN + A IM++ +
Sbjct: 3 LSTQYMYKQNMESMSALMDQNNGLFSRISAGKTLLAASDNPGGAADAVIMQNALAKMELY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMST-IKNKITAGVERG---TDSKSIQSEITQLQSQL 119
DA S ++ + +S +++ + K+ A + D + EI + +
Sbjct: 63 KDARAGVRSGMEQEDSTLSSVGKLLTKNLSEKLVAAMNGTLSEEDRAVLGQEIEGISKNM 122
Query: 120 RDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDS 179
D+A +G ++ A + + V + + + S
Sbjct: 123 LDLANTRDGSGRYIFSGFKTATAAFDDQGNYQGGDTAIHQTVADGSDMQTSHLGSDIFMS 182
Query: 180 ST 181
T
Sbjct: 183 GT 184
>gi|259907641|ref|YP_002647997.1| Flagellar hook-associated protein 3, FlgL [Erwinia pyrifoliae
Ep1/96]
gi|224963263|emb|CAX54747.1| Flagellar hook-associated protein 3, FlgL [Erwinia pyrifoliae
Ep1/96]
gi|283477484|emb|CAY73400.1| Flagellar hook-associated protein 3 FlgL [Erwinia pyrifoliae DSM
12163]
Length = 302
Score = 43.6 bits (100), Expect = 0.068, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 60/174 (34%), Gaps = 7/174 (4%)
Query: 15 QKLRDINYNLEV---VQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
Q + ++ + + R+S+G + A+DN + A I+++ + DA
Sbjct: 11 QNMESMSAQMTQNHGLFSRISAGKTLLAASDNPGGAADAVILQNALAKMELYKDARSGAR 70
Query: 72 SKVDIAKAGMSKAIDVMST-IKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSS 127
S ++ + +S +++ + K+ A + D + EI + L D+A
Sbjct: 71 SGMEQEDSTLSSVGKLLTKNLSEKLVAAMNGTLSEEDRAVLGQEIEGISKNLLDLANTRD 130
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+G + A + + V + + + S T
Sbjct: 131 GSGRYVFSGFKTGTAAFDEQGNYQGGDTAIHQTVADGSDMQISHLGSDIFMSGT 184
>gi|188534163|ref|YP_001907960.1| Flagellar hook-associated protein 3 [Erwinia tasmaniensis Et1/99]
gi|188029205|emb|CAO97077.1| Flagellar hook-associated protein 3 [Erwinia tasmaniensis Et1/99]
Length = 321
Score = 43.6 bits (100), Expect = 0.073, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 50/165 (30%), Gaps = 3/165 (1%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
Q ++ N + + +++G RV+ +D+ + A ++ S A +
Sbjct: 14 QGIQSANSSWLKAGNEMTTGNRVNKPSDDPVAAAQAVVVSQAQAETSQYDTARIFATQSQ 73
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL---QSQLRDIARGSSFNGE 131
+ + + DV+ + + I A S TQL ++QL ++A + NG
Sbjct: 74 STEETTLKQVADVIISAQTTIVAAANGTLSDADRSSYATQLEGVRAQLLNLANSTDGNGR 133
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
+ + +
Sbjct: 134 YTFAGYQSDKAPFTTDASGNTTYTGGTVPITQKVDSSRTLVTNHT 178
>gi|225871952|ref|YP_002753406.1| putative flagellar protein [Acidobacterium capsulatum ATCC 51196]
gi|225792213|gb|ACO32303.1| putative flagellar protein [Acidobacterium capsulatum ATCC 51196]
Length = 298
Score = 43.6 bits (100), Expect = 0.074, Method: Composition-based stats.
Identities = 15/172 (8%), Positives = 52/172 (30%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+ + + + + + +S+G + +DN + + S +
Sbjct: 10 NVAAAIDQTTSVQQQLTEELSNGTSIQQLSDNPSAVGENVSLNSAISSDVQYQQTASSAQ 69
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGE 131
+ + + + + +++ + T G + + Q+ TQL ++ ++ +
Sbjct: 70 GMLQVTDSALGSVVTQLTSAISLATEGNNGTLNPSNEQAIATQLSGIRDEVLSLANTSYL 129
Query: 132 NWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+T + S D +++ L+ +
Sbjct: 130 GQYVFSGSVNTEPFTLNSSTSPATVTYNGDSAVNTMTTPDGQSISLNLPGNQ 181
>gi|323490121|ref|ZP_08095341.1| hypothetical protein GPDM_12242 [Planococcus donghaensis MPA1U2]
gi|323396169|gb|EGA88995.1| hypothetical protein GPDM_12242 [Planococcus donghaensis MPA1U2]
Length = 44
Score = 43.6 bits (100), Expect = 0.075, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 15/37 (40%)
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + Q + L+ N + ++L L R
Sbjct: 8 MAKEMMEQTKNSILAQASQAMLAQANQAPQQVLQLLR 44
>gi|189339479|gb|ACD89098.1| flagellin [Bacillus thuringiensis serovar kyushuensis]
Length = 44
Score = 43.2 bits (99), Expect = 0.078, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAA 45
I TN +M+A Q L + + V +++G ++++A+DN A
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMGYLATGKKLNNASDNPA 44
>gi|310764853|gb|ADP09803.1| Flagellar hook-associated protein 3, FlgL [Erwinia sp. Ejp617]
Length = 302
Score = 43.2 bits (99), Expect = 0.086, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 60/174 (34%), Gaps = 7/174 (4%)
Query: 15 QKLRDINYNLEV---VQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
Q + ++ + + R+S+G + A+DN + A I+++ + DA
Sbjct: 11 QNMESMSAQMTQNHGLFSRISAGKTLLAASDNPGGAADAVILQNALAKMELYKDARSGAR 70
Query: 72 SKVDIAKAGMSKAIDVMST-IKNKITAGVERG---TDSKSIQSEITQLQSQLRDIARGSS 127
S ++ + +S +++ + K+ A + D + EI + L D+A
Sbjct: 71 SGMEQEDSTLSSVGKLLTKNLSEKLVAAMNGTLSEEDRAVLGQEIEGISKNLLDLANTRD 130
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+G + A + + V + + + S T
Sbjct: 131 GSGRYVFSGFKTGTAAFDEQGNYQGGDTAIHQTVADGSDMQISHLGSDIFMSGT 184
>gi|108809048|ref|YP_652964.1| flagellar hook-associated protein FlgL [Yersinia pestis Antiqua]
gi|108810755|ref|YP_646522.1| flagellar hook-associated protein FlgL [Yersinia pestis Nepal516]
gi|145597824|ref|YP_001161900.1| flagellar hook-associated protein FlgL [Yersinia pestis Pestoides
F]
gi|150260242|ref|ZP_01916970.1| lateral flagellar hook-associated protein 3 [Yersinia pestis
CA88-4125]
gi|165924845|ref|ZP_02220677.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165939078|ref|ZP_02227630.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Orientalis str. IP275]
gi|166009056|ref|ZP_02229954.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166212174|ref|ZP_02238209.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167399532|ref|ZP_02305056.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167419093|ref|ZP_02310846.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167425107|ref|ZP_02316860.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167466330|ref|ZP_02331034.1| flagellar hook-associated protein FlgL [Yersinia pestis FV-1]
gi|218927919|ref|YP_002345794.1| flagellar hook-associated protein FlgL [Yersinia pestis CO92]
gi|229837415|ref|ZP_04457578.1| lateral flagellar hook-associated protein 3 [Yersinia pestis
Pestoides A]
gi|229840630|ref|ZP_04460789.1| lateral flagellar hook-associated protein 3 [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842819|ref|ZP_04462971.1| lateral flagellar hook-associated protein 3 [Yersinia pestis biovar
Orientalis str. India 195]
gi|229900952|ref|ZP_04516076.1| lateral flagellar hook-associated protein 3 [Yersinia pestis
Nepal516]
gi|270487665|ref|ZP_06204739.1| flagellar hook-associated protein 3 [Yersinia pestis KIM D27]
gi|294502795|ref|YP_003566857.1| flagellar hook-associated protein [Yersinia pestis Z176003]
gi|108774403|gb|ABG16922.1| flagellar hook-associated protein [Yersinia pestis Nepal516]
gi|108780961|gb|ABG15019.1| putative flagellar hook-associated protein [Yersinia pestis
Antiqua]
gi|115346530|emb|CAL19407.1| putative flagellar hook-associated protein [Yersinia pestis CO92]
gi|145209520|gb|ABP38927.1| flagellar hook-associated protein [Yersinia pestis Pestoides F]
gi|149289650|gb|EDM39727.1| lateral flagellar hook-associated protein 3 [Yersinia pestis
CA88-4125]
gi|165913034|gb|EDR31659.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Orientalis str. IP275]
gi|165923045|gb|EDR40196.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165992395|gb|EDR44696.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166206920|gb|EDR51400.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166963087|gb|EDR59108.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167052036|gb|EDR63444.1| flagellar hook-associated protein 3 [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167055870|gb|EDR65651.1| flagellar hook-associated protein 3 [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229682291|gb|EEO78383.1| lateral flagellar hook-associated protein 3 [Yersinia pestis
Nepal516]
gi|229690086|gb|EEO82143.1| lateral flagellar hook-associated protein 3 [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696996|gb|EEO87043.1| lateral flagellar hook-associated protein 3 [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229705538|gb|EEO91548.1| lateral flagellar hook-associated protein 3 [Yersinia pestis
Pestoides A]
gi|262360827|gb|ACY57548.1| flagellar hook-associated protein [Yersinia pestis D106004]
gi|262364772|gb|ACY61329.1| flagellar hook-associated protein [Yersinia pestis D182038]
gi|270336169|gb|EFA46946.1| flagellar hook-associated protein 3 [Yersinia pestis KIM D27]
gi|294353254|gb|ADE63595.1| flagellar hook-associated protein [Yersinia pestis Z176003]
gi|320016704|gb|ADW00276.1| lateral flagellar hook-associated protein 3 [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 307
Score = 43.2 bits (99), Expect = 0.086, Method: Composition-based stats.
Identities = 17/177 (9%), Positives = 57/177 (32%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + + ++ + N LE + ++ + R++ +++ + + + +
Sbjct: 3 VSTPTMSSTMNRFITQHNEKLEKINKQMMTQQRITLPSEDPIASTRLLQINREQANIKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
S I S+ + +S + +IK+ + + +K I +L L +
Sbjct: 63 SSNISGLSNSLTNQTGHVSAINKQLVSIKSSLVSINGNIKSNKDIAGVADELNYMLESVV 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
G + G+++ + + + + + +
Sbjct: 123 AGLNAKNSEGRYLFAGTASNKQPITFDSAKNKYTYVGNSDNRQTGVGEGVKITENVH 179
>gi|304413324|ref|ZP_07394797.1| flagellar hook-filament junction protein [Candidatus Regiella
insecticola LSR1]
gi|304284167|gb|EFL92560.1| flagellar hook-filament junction protein [Candidatus Regiella
insecticola LSR1]
Length = 307
Score = 43.2 bits (99), Expect = 0.087, Method: Composition-based stats.
Identities = 20/200 (10%), Positives = 57/200 (28%)
Query: 20 INYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKA 79
I + ++ + +V+ ++N + +++ + L + +S K
Sbjct: 19 IQKEINRTSKQIENEKQVNCPSENPIASAYNTLIEREIKQLGSYKKINQHLTSSFSSQKN 78
Query: 80 GMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
M D ++ IK+ + ++ + +L + I + E G
Sbjct: 79 SMGNIEDTLNRIKDILLLVANDVHSTEDRRVFGQKLAGNIERIMSSLNAQNEERNYLFAG 138
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
+ + A D+ + ++ ++ + +
Sbjct: 139 TKSNEQAVKESSGSYSDNGNQQYKEVSVDKNRRMKTNVNITSAFSTNNDTRLDLLDRLKK 198
Query: 200 PQVLKDIDVSVYDASGTIST 219
D + D G I+
Sbjct: 199 LSDDMKQDKPLADYQGEIND 218
>gi|189339430|gb|ACD89072.1| flagellin [Bacillus thuringiensis serovar canadensis]
Length = 44
Score = 43.2 bits (99), Expect = 0.088, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 27/42 (64%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAA 45
I TN +++A Q L + ++ V + +++G ++++A+DN A
Sbjct: 3 IGTNVLSVNARQWLYENEKHMNVAMEHLATGKKLNNASDNPA 44
>gi|182680455|ref|YP_001834601.1| flagellar hook-associated protein FlgL [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182636338|gb|ACB97112.1| flagellar hook-associated 3 family protein [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 348
Score = 42.8 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 70/196 (35%)
Query: 243 KGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPG 302
+ I P + A + T+ S S +A ++ + + S+
Sbjct: 143 QPITDYSTPGSSNGNALDQAFQTTFGISQSDSAVSSITASNMQNFLDSSFANLFQGSNWS 202
Query: 303 YTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAME 362
S + T D ++ + + + + AN ++ K +
Sbjct: 203 TNWSQASDTVLTTQINDHQTANTSVSANEKAFKELFSAYTMIGQLGTANLNSSAFKTVVN 262
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ V+ + + I T G +G + ++I D + L + + V L D A STR+
Sbjct: 263 QAVTTVKSAISDLTNIQGGVGLVQNQIVNANDTMSLRMNYLTSQVNTLESVDPAEASTRM 322
Query: 423 SALQTQQQLAVQALSI 438
+ALQTQ + A S
Sbjct: 323 TALQTQIETAYSLTSQ 338
>gi|162418771|ref|YP_001604840.1| flagellar hook-associated protein FlgL [Yersinia pestis Angola]
gi|162351586|gb|ABX85534.1| flagellar hook-associated protein 3 [Yersinia pestis Angola]
Length = 307
Score = 42.8 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 17/177 (9%), Positives = 57/177 (32%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T + + ++ + N LE + ++ + R++ +++ + + + +
Sbjct: 3 VSTPTMSSTMNRFITQHNEKLEKINKQMMTQQRITLPSEDPIASTRLLQINREQANIKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
S I S+ + +S + +IK+ + + +K I +L L +
Sbjct: 63 SSNISGLSNSLTNQTGHVSAINKQLVSIKSSLVSINGNIKSNKDIAGVADELNYMLESVV 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
G + G+++ + + + + + +
Sbjct: 123 AGLNAKNSEGRYLFAGTASNKQPITFDSAKNKYTYVGNSDNRQTGVGEGVKITENVH 179
>gi|89100624|ref|ZP_01173482.1| hypothetical protein B14911_04584 [Bacillus sp. NRRL B-14911]
gi|89084648|gb|EAR63791.1| hypothetical protein B14911_04584 [Bacillus sp. NRRL B-14911]
Length = 44
Score = 42.8 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 13/37 (35%)
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + Q A L+ N +L L R
Sbjct: 8 MAKEMMNQTKNSILSQAAQAMLAQSNQMPQGVLQLLR 44
>gi|222147591|ref|YP_002548548.1| flagellar hook-associated protein FlgL [Agrobacterium vitis S4]
gi|221734579|gb|ACM35542.1| flagellar hook-associated protein [Agrobacterium vitis S4]
Length = 355
Score = 42.8 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 42/337 (12%), Positives = 84/337 (24%)
Query: 96 TAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIR 155
T+ + T +++ I+ Q Q+ D + + T+LG+ T+S S
Sbjct: 3 TSSISSLTIQNAMRLTISDAQKQMSDAQTEVTTGKYADVGTELGAKTSSAVDLNRDSLRL 62
Query: 156 DDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASG 215
+T L ++ T L +
Sbjct: 63 QSLMDTNSIVSTRLDASQTALDTIASAATTMQSTLVGLGTSTDSTTLDSAQKTMKSAMDS 122
Query: 216 TISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAA 275
I + + A + SP
Sbjct: 123 FIDAANTSVNGEYLFSGINTDVKPITDYYYIDDDGNETDAKQNFDNLFSGYFGMSPDDDG 182
Query: 276 SATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEI 335
+ D + +D S T E S +
Sbjct: 183 VSGISADQMDDFMENVLEPSFDGADWTDNWSAATDETMTSRISKNEVIQSSSSANSDGFR 242
Query: 336 DSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDF 395
+G V + + N + + + + + ++G R+ D
Sbjct: 243 YTGLVSVIGSEMLNGNYSTETRNAMISKAIEYSGLAVSGINDERTQLGLSQERVTNANDS 302
Query: 396 IKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ +D +E + L D STRL+ LQ+ + +
Sbjct: 303 LTSQKDIIENQISDLTGVDAYEASTRLNNLQSLVETS 339
>gi|332092869|gb|EGI97937.1| flagellar hook-associated protein 3 [Shigella dysenteriae 155-74]
Length = 197
Score = 42.8 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 22/195 (11%), Positives = 51/195 (26%), Gaps = 5/195 (2%)
Query: 257 AAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHY 316
A +G + G+ + + S T K+ ++
Sbjct: 5 ANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGHTGDKIFDSIT 64
Query: 317 YVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCAT 376
+ + + + D A+++ + +
Sbjct: 65 SNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSLNNVL 124
Query: 377 AAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQAL 436
++G+ + + + + + LVD D + + QQ A+QA
Sbjct: 125 TVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTALQAS 180
Query: 437 SIVNNSTARILSLFR 451
LSLF+
Sbjct: 181 YKAFTDMQG-LSLFQ 194
>gi|254294558|ref|YP_003060581.1| hypothetical protein Hbal_2204 [Hirschia baltica ATCC 49814]
gi|254043089|gb|ACT59884.1| hypothetical protein Hbal_2204 [Hirschia baltica ATCC 49814]
Length = 300
Score = 42.4 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 29/71 (40%)
Query: 365 VSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSA 424
++ DT I + G+ SRI + +A+ VG + D+A + RLS
Sbjct: 217 LAQFDTVIDGLVQLEARNGNTQSRITNAIERQTTQVNAIGATVGEITYVDLAEVAARLSN 276
Query: 425 LQTQQQLAVQA 435
QT Q +
Sbjct: 277 AQTTYQASASI 287
>gi|189164083|gb|ACD77149.1| flagellin C [Bacillus thuringiensis serovar sotto]
gi|189164087|gb|ACD77151.1| flagellin C [Bacillus thuringiensis serovar sotto]
gi|189164091|gb|ACD77153.1| flagellin C [Bacillus thuringiensis serovar sotto]
gi|189339453|gb|ACD89083.1| flagellin [Bacillus thuringiensis serovar sotto]
Length = 45
Score = 42.4 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAA 45
I TN S+M+A Q + + V + +++G ++++A+DN A
Sbjct: 3 ISTNISSMNARQSFYENEKRMNVAMEHLATGKKLNNASDNPA 44
>gi|189339483|gb|ACD89100.1| flagellin [Bacillus thuringiensis serovar yunnanensis]
Length = 42
Score = 42.4 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADN 43
I TN +M+A Q L + + V + +++G +++ A+DN
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNHASDN 42
>gi|251789175|ref|YP_003003896.1| flagellar hook-associated protein 3 [Dickeya zeae Ech1591]
gi|247537796|gb|ACT06417.1| flagellar hook-associated protein 3 [Dickeya zeae Ech1591]
Length = 309
Score = 42.4 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 24/259 (9%), Positives = 69/259 (26%), Gaps = 2/259 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T+ Q + D +++S RV +D+ S A ++
Sbjct: 3 LSTSIIFQQGMQGVTDGLSTFSKTGQQLASNTRVLTPSDDPIAASKAVMVNQAQNQNEQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT--AGVERGTDSKSIQSEITQLQSQLRD 121
+ A + ++ + ++ + ++T + G + + I + + L+SQL +
Sbjct: 63 TLARTFAKNGMNGELSVLTNVVTALTTGSTTLISADGTKNDNARQMIATSLRGLKSQLLN 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+A + NG + + + + +
Sbjct: 123 LANSTDGNGNYVFGGYKTNVQPFTTDASGTVSYVGGTQAISQQVDANRIMTVGHIGSDVF 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
+ + + + S ++ + + A ++A
Sbjct: 183 NNASGTADIFSALDSAISALETPLEGATDAVKSANTASLNGAIQSIRSALTNVSSAQATL 242
Query: 242 AKGIATIPVPLPAAPAAPN 260
+ I
Sbjct: 243 GVQLQEIDTLDSIGTDRTM 261
>gi|86139958|ref|ZP_01058523.1| secreted hemolysin-type calcium-binding bacteriocin, putative
[Roseobacter sp. MED193]
gi|85823376|gb|EAQ43586.1| secreted hemolysin-type calcium-binding bacteriocin, putative
[Roseobacter sp. MED193]
Length = 3377
Score = 42.4 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 46/455 (10%), Positives = 122/455 (26%), Gaps = 37/455 (8%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNG---------------ALSA 62
+ + L+ ++ AA N + +D +L
Sbjct: 175 QQLQSALDTASAELA-------AAQNNVGAMTSDKADADQTVTDAQTTLDAAAATMSLLQ 227
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTD----SKSIQSEITQLQSQ 118
S +G + + +A+ + ++ + ++ + ++ + Q+E+T LQ+Q
Sbjct: 228 SSGQVGDAQAALSLAQTALIQSQNALNAAQGELDTATTSAASMLSMRDAKQTEVTNLQNQ 287
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+ A E L + + + + +
Sbjct: 288 -KTTADQELATTEALLSDAQDALLLETNGADAVTVAQTAVDDATTAVNAAQTHVNELDGQ 346
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+E GL + + + + A+ T + + +
Sbjct: 347 LQQAQSELDGLNAQLQTAQDAVTDTQARVTAAEQAADETQTARDSAQALFDTEVTEQASA 406
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGS-----KSPSVAASATYIRMGNSDIWVRATT 293
+ + + + ++ S + + + A A +
Sbjct: 407 QVEMLSALNVYLSGGSLADFSVASAAYSAAREEKLAAETALADAISADDAADQLAATENA 466
Query: 294 KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD 353
S T + T + + + L + N
Sbjct: 467 ALSTAQSQVTTLTGQRDAAITTRDGLNTQLGAANTVLSTAQGNLSTVQQDLLTAQQNNQA 526
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+ + A+ + + +D ++ ++ + + + V + G +
Sbjct: 527 YIDAQEAVTQAQADVDAAQVVIDGLVSQLTTVEGELTTLNINLTNANNEVTRLEGIVQ-- 584
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+E+T L+ Q A QAL + A IL+
Sbjct: 585 ---TETTDLNTAQGGVTTAQQALVAAQTADAAILA 616
>gi|298356980|emb|CBM40871.1| flagellin [Ralstonia pickettii]
Length = 157
Score = 42.4 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 35/104 (33%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ ++T + + L ++ + + ID + AA
Sbjct: 54 GSVTSTTFQYGQNSATDVATVTNANLASFGTLSSTSVTSTANATAAQAKIDADLASLKAA 113
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+G+ S + + + A+ +VD D ASE++ +
Sbjct: 114 RADLGAQQSGLSSTINTLTSSNTALSAAKSAMVDTDYASETSNM 157
>gi|271500073|ref|YP_003333098.1| flagellar hook-associated protein 3 [Dickeya dadantii Ech586]
gi|270343628|gb|ACZ76393.1| flagellar hook-associated protein 3 [Dickeya dadantii Ech586]
Length = 309
Score = 42.4 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 21/225 (9%), Positives = 64/225 (28%), Gaps = 2/225 (0%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
+ T+ + Q + D N +++S RV + +D+ S A ++
Sbjct: 3 LSTSIIFQQSMQGVTDGLSNFSKTGQQLASNTRVVNPSDDPIAASKAVMVNQAQAQNDQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN--KITAGVERGTDSKSIQSEITQLQSQLRD 121
S A + ++ + ++ +++ G + D + I + + L++QL +
Sbjct: 63 SLARTFAENGMNSELSVLTNVATALTSASTTLLSADGTKNDNDRQLIATSLRGLKAQLLN 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ + NG + + N + + +
Sbjct: 123 LGNSTDGNGNFIFGGYKTDAQPFTTNAAGTVSYVGGNQAISQQVDADRVMTVGHVGSDVF 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLAT 226
+ + + + + ++ +
Sbjct: 183 NNASGTADIFGALDTAISALETPLEGATDAVKAANTASINAASQS 227
>gi|283956129|ref|ZP_06373616.1| flagellin [Campylobacter jejuni subsp. jejuni 1336]
gi|283792449|gb|EFC31231.1| flagellin [Campylobacter jejuni subsp. jejuni 1336]
Length = 248
Score = 42.4 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 19/193 (9%), Positives = 52/193 (26%), Gaps = 2/193 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + L + + + +++ +S ++A +IA ++S + +
Sbjct: 8 MQQNYYLNNAQKASDKALENIAAVRAISGV--DSANLAIADSLRSQSSTIDQGIANAYDA 65
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ IA A ++ + + T+ I +
Sbjct: 66 IGVLQIADASLTNISQSADRLNELSVKMNNAALNDSQKGMLRTEATRIQESINDSFNNAT 125
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
N + + + + G + I D + L ++ +
Sbjct: 126 YNGKNVFQTMNFVVGSGTETTNLNPLATGGLSIDNQDSITNFMDQLGSLRSEIGSGINAI 185
Query: 191 DRNHKIKVEPQVL 203
N V+ +
Sbjct: 186 TSNINASVQNSIN 198
>gi|315497621|ref|YP_004086425.1| flagellin domain protein [Asticcacaulis excentricus CB 48]
gi|315415633|gb|ADU12274.1| flagellin domain protein [Asticcacaulis excentricus CB 48]
Length = 305
Score = 42.4 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 17/201 (8%), Positives = 44/201 (21%), Gaps = 2/201 (0%)
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
+ G + + + +D S
Sbjct: 107 TTVLQSSYMAFADGLNYKHQGAYLFGGGNESEAPLAAMSLNDLAGTPAADVFKNGSVKKA 166
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDT 370
+ ++ ++ + + ++
Sbjct: 167 SKIDATTTLQTGMLASDIGTEGATLFRDLKAFIDANAPMQGAMTDAQQATLQGLATRMNA 226
Query: 371 QIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQ 430
G+ +R+ ++ ++ + D +MA T+L Q
Sbjct: 227 AYTKMVDHTALNGTFQNRVENTLKSLEGQESSLNNLISNKTDINMAEAYTKLEQADLTVQ 286
Query: 431 LAVQALSIVNNSTARILSLFR 451
A Q + N + +L L R
Sbjct: 287 AASQVV--ANLKSVSLLDLLR 305
>gi|153952656|ref|YP_001398336.1| flagellin subunit protein FlaC [Campylobacter jejuni subsp. doylei
269.97]
gi|152940102|gb|ABS44843.1| flagellin subunit protein FlaC [Campylobacter jejuni subsp. doylei
269.97]
Length = 246
Score = 42.4 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 19/193 (9%), Positives = 53/193 (27%), Gaps = 2/193 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + L + + + +++ +S ++A +IA ++S + +
Sbjct: 9 MQQNYYLNNAQKASDKALENIAAVRAISGV--DSANLTIADSLRSQSSTIDQGVANAYDA 66
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ IA A ++ + + T+ + I +
Sbjct: 67 IGVLQIADASLTNISRSADRLNELSVKMNNAALNDSQKGMLRTEAKRIQESINDSFNNAT 126
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
N + + + + G + I D + L ++ +
Sbjct: 127 YNGKNVFQTMNFVVGSGTETINLNPLATGGLSIDNQDSITNFMDQLGSLRSEIGSSINAI 186
Query: 191 DRNHKIKVEPQVL 203
N V+ +
Sbjct: 187 TSNINASVQNSIN 199
>gi|313585297|gb|ADR70856.1| flagellin [Borrelia afzelii]
Length = 200
Score = 42.0 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVKTAE 75
>gi|86153517|ref|ZP_01071721.1| flagellin subunit protein FlaC [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|85843243|gb|EAQ60454.1| flagellin subunit protein FlaC [Campylobacter jejuni subsp. jejuni
HB93-13]
Length = 249
Score = 42.0 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 48/129 (37%), Gaps = 5/129 (3%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + L + + + +++ +S ++A +IA ++S + +
Sbjct: 9 MQQNYYLNNAQKASDKALENIAAVRAISGV--DSANLAIADSLRSQSSTIDQGVANAYDA 66
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLRDIARGSS 127
+ IA A ++ + + ++E T++Q + D ++
Sbjct: 67 IGVLQIADASLTNISQSADRLNELSVKMNNAALNDSQKGMLRTEATRIQESINDSFNNAT 126
Query: 128 FNGENWLRT 136
+NG+N +T
Sbjct: 127 YNGKNVFQT 135
>gi|315124220|ref|YP_004066224.1| flagellin subunit protein FlaC [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|315017942|gb|ADT66035.1| flagellin subunit protein FlaC [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 248
Score = 42.0 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 19/193 (9%), Positives = 52/193 (26%), Gaps = 2/193 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + L + + + +++ +S ++A +IA ++S + +
Sbjct: 8 MQQNYYLNNAQKASDKALENIAAVRAISGV--DSANLAIADSLRSQSSTIDQGVANAYDA 65
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ IA A ++ + + T+ I +
Sbjct: 66 IGVLQIADASLTNISQSADRLNELSVKMNNAALNDSQKGMLRTEATRIQESINDSFNNAT 125
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
N + + + + G + I D + L ++ +
Sbjct: 126 YNGKNVFQTMNFVVGSGTETTNLNPLATGGLSIDNQDSITNFMDQLGSLRSEIGSGINAI 185
Query: 191 DRNHKIKVEPQVL 203
N V+ +
Sbjct: 186 TSNINASVQNSIN 198
>gi|268680823|ref|YP_003305254.1| flagellin domain protein [Sulfurospirillum deleyianum DSM 6946]
gi|268618854|gb|ACZ13219.1| flagellin domain protein [Sulfurospirillum deleyianum DSM 6946]
Length = 239
Score = 42.0 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 36/100 (36%), Gaps = 3/100 (3%)
Query: 43 NAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE-- 100
++A I+ + S +L+ S IA + + +
Sbjct: 39 DSANLVISDALSSQISSLTQSVQNANETVSMYQIADSSLQALQANSDRLNELSVRYNSAS 98
Query: 101 -RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
+Q E + +Q ++DI +++NG+N L + G
Sbjct: 99 LNDDQRAMVQEEFSAIQGAMQDITEQTTYNGQNMLSSAYG 138
>gi|1165184|gb|AAC43555.1| orf4 [Vibrio cholerae]
Length = 35
Score = 42.0 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
E+T++ Q QQ++ L+ +L L R
Sbjct: 1 ETTQMIKQQILQQVSTSVLAQAKRQPKFVLFLLR 34
>gi|307563608|gb|ADN52368.1| flagellin [Borrelia lusitaniae]
Length = 200
Score = 42.0 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|86151596|ref|ZP_01069810.1| flagellin subunit protein FlaC [Campylobacter jejuni subsp. jejuni
260.94]
gi|157415007|ref|YP_001482263.1| flagellin subunit protein FlaC [Campylobacter jejuni subsp. jejuni
81116]
gi|85841225|gb|EAQ58473.1| flagellin subunit protein FlaC [Campylobacter jejuni subsp. jejuni
260.94]
gi|157385971|gb|ABV52286.1| flagellin [Campylobacter jejuni subsp. jejuni 81116]
gi|307747645|gb|ADN90915.1| Flagellin C [Campylobacter jejuni subsp. jejuni M1]
gi|315931922|gb|EFV10877.1| flagellin subunit protein FlaC [Campylobacter jejuni subsp. jejuni
327]
Length = 249
Score = 42.0 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 19/193 (9%), Positives = 52/193 (26%), Gaps = 2/193 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + L + + + +++ +S ++A +IA ++S + +
Sbjct: 9 MQQNYYLNNAQKASDKALENIAAVRAISGV--DSANLAIADSLRSQSSTIDQGVANAYDA 66
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ IA A ++ + + T+ I +
Sbjct: 67 IGVLQIADASLTNISQSADRLNELSVKMNNAALNDSQKGMLRTEATRIQESINDSFNNAT 126
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
N + + + + G + I D + L ++ +
Sbjct: 127 YNGKNVFQTMNFVVGSGTETTNLNPLATGGLSIDNQDSITNFMDQLGSLRSEIGSGINAI 186
Query: 191 DRNHKIKVEPQVL 203
N V+ +
Sbjct: 187 TSNINASVQNSIN 199
>gi|315058183|gb|ADT72512.1| Flagellin C [Campylobacter jejuni subsp. jejuni S3]
Length = 248
Score = 42.0 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 18/193 (9%), Positives = 51/193 (26%), Gaps = 2/193 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + L + + + +++ +S ++A +IA ++S + +
Sbjct: 8 MQQNYYLNNAQKASDKALENIAAVRAISGV--DSANLAIADSLRSQSSTIDQGVANAYDA 65
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ IA A ++ + + T+ I +
Sbjct: 66 IGVLQIADASLTNISQSADRLNELSVKMNNAALNDSQKGMLRTEATRIQESINDSFNNAT 125
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
N + + + + + I D + L ++ +
Sbjct: 126 YNGKNVFQTMNFVVGSGTETTNLNPLATDGLSIDNQDSITNFMDQLGSLRSEIGSGINAI 185
Query: 191 DRNHKIKVEPQVL 203
N V+ +
Sbjct: 186 TSNINASVQNSIN 198
>gi|148926685|ref|ZP_01810366.1| flagellin [Campylobacter jejuni subsp. jejuni CG8486]
gi|145845204|gb|EDK22299.1| flagellin [Campylobacter jejuni subsp. jejuni CG8486]
Length = 249
Score = 42.0 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 48/129 (37%), Gaps = 5/129 (3%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + L + + + +++ +S ++A +IA ++S + +
Sbjct: 9 MQQNYYLNNAQKASDKALENIAAVRAISGV--DSANLAIADSLRSQSSTIDQGVANAYDA 66
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI---QSEITQLQSQLRDIARGSS 127
+ IA A ++ + + ++E T++Q + D ++
Sbjct: 67 IGVLQIADASLTNISQSADRLNELSVKMNNAALNDSQKGMLRTEATRIQESINDSFNNAT 126
Query: 128 FNGENWLRT 136
+NG+N +T
Sbjct: 127 YNGKNVFQT 135
>gi|64419871|gb|AAY41407.1| flagellin [Borrelia afzelii]
gi|109727147|gb|ABG45879.1| Fla [Borrelia afzelii]
gi|109727149|gb|ABG45880.1| Fla [Borrelia afzelii]
gi|109727153|gb|ABG45882.1| Fla [Borrelia afzelii]
gi|218202706|gb|ACK75971.1| flagellin [Borrelia afzelii]
gi|261288839|gb|ACX69613.1| flagellin [Borrelia afzelii]
gi|307563590|gb|ADN52359.1| flagellin [Borrelia afzelii]
gi|307563592|gb|ADN52360.1| flagellin [Borrelia afzelii]
gi|307563594|gb|ADN52361.1| flagellin [Borrelia afzelii]
Length = 200
Score = 42.0 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVKTAE 75
>gi|64420045|gb|AAY41411.1| flagellin [Borrelia lusitaniae]
gi|307563604|gb|ADN52366.1| flagellin [Borrelia lusitaniae]
gi|307563606|gb|ADN52367.1| flagellin [Borrelia lusitaniae]
gi|313585303|gb|ADR70859.1| flagellin [Borrelia lusitaniae]
gi|313585305|gb|ADR70860.1| flagellin [Borrelia lusitaniae]
Length = 200
Score = 41.7 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|307563602|gb|ADN52365.1| flagellin [Borrelia valaisiana]
Length = 200
Score = 41.7 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGTD---SKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGKLNEVEKVLVRMKELAVQSGNGTYPDSDRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L + A+
Sbjct: 61 MLSNKSAAQNVKTAE 75
>gi|305433237|ref|ZP_07402393.1| flagellin subunit protein FlaC [Campylobacter coli JV20]
gi|304443938|gb|EFM36595.1| flagellin subunit protein FlaC [Campylobacter coli JV20]
Length = 249
Score = 41.7 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 20/220 (9%), Positives = 55/220 (25%), Gaps = 2/220 (0%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
S M + L + E + +++ +S ++A +IA ++S + +
Sbjct: 6 ASMMQQNYYLNNAQKASEKALENIAAVRAIS--GIDSANLAIADSLRSQSSTIDQGIANA 63
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSS 127
+ IA A ++ + T++ I +
Sbjct: 64 YDAIGVLQIADASLTNISQSADRLNELSVKMNNAALSDSQKSMLRTEVTRIQESINDSFN 123
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
N + + + + + I D + L ++
Sbjct: 124 NATYNGKNVFQTMNFVVGSGTETTNLNPLTTSGLSIDNQDSITNFMDQLGALRSEIGSSI 183
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATT 227
+ N V+ + + + +
Sbjct: 184 NAITSNINASVQNSINTKAAENNLLNNDMAKNVNDFNSNY 223
>gi|121612344|ref|YP_001000416.1| flagellin subunit protein FlaC [Campylobacter jejuni subsp. jejuni
81-176]
gi|167005358|ref|ZP_02271116.1| flagellin [Campylobacter jejuni subsp. jejuni 81-176]
gi|87249461|gb|EAQ72421.1| flagellin subunit protein FlaC [Campylobacter jejuni subsp. jejuni
81-176]
Length = 249
Score = 41.7 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 19/193 (9%), Positives = 52/193 (26%), Gaps = 2/193 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + L + + + +++ +S ++A +IA ++S + +
Sbjct: 9 MQQNYYLNNAQKASDKALENIAAVRAISGV--DSANLAIADSLRSQSSTIDQGVANAYDA 66
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ IA A ++ + + T+ I +
Sbjct: 67 IGVLQIADASLTNISQSADRLNELSVKMNNAALNDSQKGMLRTEATRIQESINNSFNNAT 126
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
N + + + + G + I D + L ++ +
Sbjct: 127 YNGKNVFQTMNFVVGSGTETTNLNPLATGGLSIDNQDSITNFMDQLGSLRSEIGSGINAI 186
Query: 191 DRNHKIKVEPQVL 203
N V+ +
Sbjct: 187 TSNINASVQNSIN 199
>gi|57237022|ref|YP_178824.1| flagellin subunit protein FlaC [Campylobacter jejuni RM1221]
gi|205355562|ref|ZP_03222333.1| flagellin [Campylobacter jejuni subsp. jejuni CG8421]
gi|57165826|gb|AAW34605.1| flagellin subunit protein FlaC [Campylobacter jejuni RM1221]
gi|205346796|gb|EDZ33428.1| flagellin [Campylobacter jejuni subsp. jejuni CG8421]
gi|284925976|gb|ADC28328.1| flagellin subunit protein FlaC [Campylobacter jejuni subsp. jejuni
IA3902]
Length = 249
Score = 41.7 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 18/193 (9%), Positives = 51/193 (26%), Gaps = 2/193 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + L + + + +++ +S ++A +IA ++S + +
Sbjct: 9 MQQNYYLNNAQKASDKALENIAAVRAISGV--DSANLAIADSLRSQSSTIDQGVANAYDA 66
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ IA A ++ + + T+ I +
Sbjct: 67 IGVLQIADASLTNISQSADRLNELSVKMNNAALNDSQKGMLRTEATRIQESINDSFNNAT 126
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
N + + + + + I D + L ++ +
Sbjct: 127 YNGKNVFQTMNFVVGSGTETTNLNPLATDGLSIDNQDSITNFMDQLGSLRSEIGSGINAI 186
Query: 191 DRNHKIKVEPQVL 203
N V+ +
Sbjct: 187 TSNINASVQNSIN 199
>gi|86149849|ref|ZP_01068078.1| flagellin subunit protein FlaC [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|85839667|gb|EAQ56927.1| flagellin subunit protein FlaC [Campylobacter jejuni subsp. jejuni
CF93-6]
Length = 249
Score = 41.7 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 18/193 (9%), Positives = 51/193 (26%), Gaps = 2/193 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + L + + + +++ +S ++A +IA ++S + +
Sbjct: 9 MQQNYYLNNAQKASDKALENIAAVRAISGV--DSANLAIADSLRSQSSTIDQGVANAYDA 66
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ IA A ++ + + T+ I +
Sbjct: 67 IGVLQIADASLTNISQSADRLNELSVKMNNAALNDSQKGMLRTEATRIQESINDSFNNAT 126
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
N + + + + + I D + L ++ +
Sbjct: 127 YNGKNVFQTMNFVVGSGTETTNLNPLATDGLSIDNQDSITNFMDQLGSLRSEIGSGINAI 186
Query: 191 DRNHKIKVEPQVL 203
N V+ +
Sbjct: 187 TSNINASVQNSIN 199
>gi|296122955|ref|YP_003630733.1| flagellar hook-associated protein 3 [Planctomyces limnophilus DSM
3776]
gi|296015295|gb|ADG68534.1| flagellar hook-associated protein 3 [Planctomyces limnophilus DSM
3776]
Length = 638
Score = 41.7 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 16/214 (7%), Positives = 61/214 (28%), Gaps = 2/214 (0%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGS 71
+A++ L+ + +Q ++++ + + ++N ++S + V
Sbjct: 19 NANRDLQTGTSLISRLQQQINTQQKYNLLSENPTATRQTSSLQSLLERVQGVRSQHTYNQ 78
Query: 72 SKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDI--ARGSSFN 129
+ A + DV+ K + G+ + + ++ + ++ + + +
Sbjct: 79 GFLSAADNALGAVNDVVVQAKGILQTGIGSTSTPEEKIGLANEVATLIQSALNSANTQYQ 138
Query: 130 GENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGL 189
+ + + ++ + +D+ ++
Sbjct: 139 DRFLFSGTATGVSPFDRTGDTVIYRGNSGEVKAFVDVNQLVSTSLSGIDAFGGISQPNVT 198
Query: 190 LDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFK 223
P V +S T++
Sbjct: 199 ALSPALELTTPLSALKNGAGVNLSSLTVTVDNGT 232
Score = 41.3 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 30/76 (39%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
++ T + +IG+ I + + ++ + + D D+ +T+L L+
Sbjct: 558 LEKASGQITISRTEIGTRQQLIDEVGNRLDDQNLLTKETLSNIFDTDLTEAATQLLQLRQ 617
Query: 428 QQQLAVQALSIVNNST 443
+ ++Q + +
Sbjct: 618 VYEASMQLTAQTLQLS 633
>gi|189339445|gb|ACD89079.1| flagellin [Bacillus thuringiensis serovar jegathesan]
gi|189339449|gb|ACD89081.1| flagellin [Bacillus thuringiensis serovar darmstadiensis]
Length = 42
Score = 41.7 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADN 43
I TN +M+A Q L + + V + +++G ++++A+DN
Sbjct: 3 IGTNVLSMNARQSLYENEKRMNVAMEHLATGKKLNNASDN 42
>gi|313585279|gb|ADR70847.1| flagellin [Borrelia garinii]
Length = 200
Score = 41.7 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + ++ +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNSTYSDADRGSIQIEIEQLTDEINRIADQAQYSQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|146323201|ref|XP_748566.2| hypothetical protein AFUA_3G02430 [Aspergillus fumigatus Af293]
gi|129556515|gb|EAL86528.2| hypothetical protein AFUA_3G02430 [Aspergillus fumigatus Af293]
Length = 547
Score = 41.7 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 22/301 (7%), Positives = 61/301 (20%), Gaps = 5/301 (1%)
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
K+ + S Q E +L N L L S + +
Sbjct: 190 KVMSESGSSILGYSAQREQVNGGDELDGSGANKDDQDSNALAYLLMSDFKNPPAEGSIQY 249
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
+ V
Sbjct: 250 SGPWVDGDDRVASFCMNRALFWNWMLPIARQVVVAMTPVPETPYVSYAGTPPDMPWRTRP 309
Query: 214 SGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSV 273
I + + V +P + +V
Sbjct: 310 RYHIGDTNASANDYKWVPNPSGGWSTSMPMKFTWDKVTVPHNSNDWMIGEEWGDNTQATV 369
Query: 274 AASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPK 333
+ A R+ + T T + + + T+++ +
Sbjct: 370 SFGAGTERLTVKGGSKFRYQIDHHRDGMSGTRQVFWVEVFTDWRLSIDMTSIEEGGIVFH 429
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS-----FIDTQIKCATAAAGKIGSISSR 388
++ V + + + + + E ++ + ++ + + + ++R
Sbjct: 430 PKENNNEDVKVAYKEYGDMKMESTAQDLAESIADDVKQNMTAALESVSETLSQAMANANR 489
Query: 389 I 389
+
Sbjct: 490 L 490
>gi|315926836|gb|EFV06210.1| bacterial flagellin family protein [Campylobacter jejuni subsp.
jejuni DFVF1099]
Length = 248
Score = 41.7 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 18/193 (9%), Positives = 52/193 (26%), Gaps = 2/193 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + L + + + +++ +S ++A +IA ++S + +
Sbjct: 8 MQQNYYLNNAQKASDKALENIAAVRAISGV--DSANLAIADSLRSQSSTIDQGVANAYDA 65
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ IA A ++ + + T+ I +
Sbjct: 66 IGVLQIADASLTNISQSADRLNELSVKMNNAALNDSQKGMLRTEATRIQESINDSFNNAT 125
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
N + + + + + I + D + L ++ +
Sbjct: 126 YNGKNVFQTMNFVVGSGTETTNLNPLATDGLSIDSQDSITNFMDQLGSLRSEIGSGINAI 185
Query: 191 DRNHKIKVEPQVL 203
N V+ +
Sbjct: 186 TSNINASVQNSIN 198
>gi|313585295|gb|ADR70855.1| flagellin [Borrelia afzelii]
Length = 200
Score = 41.7 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQYNQTH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVKTAE 75
>gi|895786|emb|CAA61528.1| flagellin [Campylobacter upsaliensis]
Length = 436
Score = 41.7 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 3/134 (2%)
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
M + + ++ TIK K T + G +Q++I +L +L +IA +SFNG+ L
Sbjct: 1 DKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLL 60
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+ I S + + T ++ S T +
Sbjct: 61 SGGFINQEFQIGSSSNQTIKATIGASQSSKIGLTRFETGTQVIQSGTAQMTIKNYNGIDD 120
Query: 195 KIKVEPQVLKDIDV 208
++ +
Sbjct: 121 FKFQAVKISTSVGT 134
>gi|1857639|gb|AAB48473.1| flagellin [Campylobacter jejuni]
Length = 249
Score = 41.7 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 18/193 (9%), Positives = 51/193 (26%), Gaps = 2/193 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + L + + + +++ +S ++A +IA ++S + +
Sbjct: 9 MQQNYYLNNAQKASDKALENIAAVRAISGV--DSANLAIADSLRSQSSTIDQGVANAYDA 66
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ IA A ++ + + T+ I +
Sbjct: 67 IGVLQIADASLTNISQSADRLNELSVKMNNAALNDSQKGMLRTEATRIQESINDSFNNAT 126
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
N + + + + + I D + L ++ +
Sbjct: 127 YNGKNVFQTMNFVVGSGTETTNLNPLATDGLSIDNQDSITNFMDQLGSLRSEIGSGINAI 186
Query: 191 DRNHKIKVEPQVL 203
N V+ +
Sbjct: 187 TSNINASVQNSIN 199
>gi|313650463|gb|EFS14870.1| flagellar hook-associated protein 3 [Shigella flexneri 2a str.
2457T]
gi|332759625|gb|EGJ89930.1| flagellar hook-associated protein 3 [Shigella flexneri 2747-71]
gi|332761431|gb|EGJ91715.1| flagellar hook-associated protein 3 [Shigella flexneri K-671]
gi|332767693|gb|EGJ97886.1| flagellar hook-associated protein FlgL [Shigella flexneri 2930-71]
gi|333019322|gb|EGK38605.1| flagellar hook-associated protein 3 [Shigella flexneri K-304]
Length = 183
Score = 41.3 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 20/185 (10%), Positives = 50/185 (27%), Gaps = 5/185 (2%)
Query: 267 GSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLD 326
+ + G+ + + S T K+ ++
Sbjct: 1 MGATYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGHTGDKIFDSITSNAVAEPDGS 60
Query: 327 SRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSIS 386
+ + + + D A+++ + + ++G+
Sbjct: 61 ASETNLFAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSLNNVLTVRAELGTQL 120
Query: 387 SRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARI 446
+++ + + + LVD D + + QQ A+QA
Sbjct: 121 NKLESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----IMQQTALQASYKAFTDMQG- 175
Query: 447 LSLFR 451
LSLF+
Sbjct: 176 LSLFQ 180
>gi|27381967|ref|NP_773496.1| flagellar hook-associated protein FlgL [Bradyrhizobium japonicum
USDA 110]
gi|27355137|dbj|BAC52121.1| flgL [Bradyrhizobium japonicum USDA 110]
Length = 352
Score = 41.3 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 36/305 (11%), Positives = 74/305 (24%)
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
D+G + + + T + V T ++
Sbjct: 38 RFADVGLELGATTGGDLTLRADWSFADQLVDTNELVSGRLDVTQTRITQLGTTATSFLKD 97
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
I + A+ ++ N AT
Sbjct: 98 LIAARSTDNGGRIVLPPASANLQDLIGALNVSYNGSYLFSGINTQNMPITAYATGSASKN 157
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
A T S A+ ++ + S+
Sbjct: 158 QVDADFAAAPPTGFGFPQSSASVSSITPAQMQTFLNTTFDAEFASPAWNTNWSSATDQVM 217
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
TE + + + +A ++ +++ + I I
Sbjct: 218 QSRISTTEVADTSVSANQTGFRKLAEAYTMMADLGNAKLSQETFQVVVDKAIGLIGGAIT 277
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAV 433
G +G++ RI + +K +D + + + D S R++ LQTQ Q A+
Sbjct: 278 DLATLGGGVGTVQQRITSATNKLKTQQDILNNQIVGMEKVDPTEASVRVNTLQTQIQTAL 337
Query: 434 QALSI 438
S
Sbjct: 338 ALTSQ 342
>gi|57167732|ref|ZP_00366872.1| flagellin [Campylobacter coli RM2228]
gi|57020854|gb|EAL57518.1| flagellin [Campylobacter coli RM2228]
Length = 249
Score = 41.3 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 20/215 (9%), Positives = 53/215 (24%), Gaps = 2/215 (0%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAI 67
S M + L + E + +++ +S ++A +IA ++S + +
Sbjct: 6 ASMMQQNYYLNNAQKASEKALENIAAVRAIS--GIDSANLAIADSLRSQSSTIDQGVANA 63
Query: 68 GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSS 127
+ IA A ++ + T+ I +
Sbjct: 64 YDAIGVLQIADASLTNISQSADRLNELSVKMNNAALSDSQKSMLRTEATRIQESINDSFN 123
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
N + + + + + I D + L ++
Sbjct: 124 NATYNGKNVFQTMNFVVGSGTETTNLNPLTTSGLSIDNQDSITNFMDQLGALRSEIGSSI 183
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
+ N V+ + + +
Sbjct: 184 NAITSNINASVQNSINTKAAENNLLNNDMAKNVND 218
>gi|88596848|ref|ZP_01100084.1| flagellin subunit protein FlaC [Campylobacter jejuni subsp. jejuni
84-25]
gi|218562359|ref|YP_002344138.1| flagellin [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|9296980|sp|P96747|FLAC_CAMJE RecName: Full=Flagellin C
gi|88190537|gb|EAQ94510.1| flagellin subunit protein FlaC [Campylobacter jejuni subsp. jejuni
84-25]
gi|112360065|emb|CAL34857.1| flagellin [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|315930591|gb|EFV09623.1| flagellin subunit protein FlaC [Campylobacter jejuni subsp. jejuni
305]
Length = 249
Score = 41.3 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 18/193 (9%), Positives = 52/193 (26%), Gaps = 2/193 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + L + + + +++ +S ++A +IA ++S + +
Sbjct: 9 MQQNYYLNNAQKASDKALENIAAVRAISGV--DSANLAIADSLRSQSSTIDQGVANAYDA 66
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ IA A ++ + + T+ I +
Sbjct: 67 IGVLQIADASLTNISQSADRLNELSVKMNNAALNDSQKGMLRTEATRIQESINDSFNNAT 126
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
N + + + + + I + D + L ++ +
Sbjct: 127 YNGKNVFQTMNFVVGSGTETTNLNPLATDGLSIDSQDSITNFMDQLGSLRSEIGSGINAI 186
Query: 191 DRNHKIKVEPQVL 203
N V+ +
Sbjct: 187 TSNINASVQNSIN 199
>gi|34558553|gb|AAQ75042.1| flagellin [Borrelia afzelii]
Length = 195
Score = 41.3 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 10/160 (6%), Positives = 36/160 (22%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 36 QYNQMHMLSNKSASQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAITVN 95
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
S + + +
Sbjct: 96 IYSANVANLFAGEGAQAAQAAPVQEGAQEEGAQQPTPATAPTQGGVNSPVNVTTTVDANT 155
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
++ I+ I+ + +G+ +R+ ++ + + +
Sbjct: 156 SLAKIENAIRMISDQRANLGAFQNRLESIKNSTEYAIENL 195
>gi|81251612|gb|ABB69954.1| flagellin [Borrelia garinii]
Length = 195
Score = 41.3 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 11/152 (7%), Positives = 37/152 (24%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + T+ G + + A+ S N + +
Sbjct: 44 SNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVAN 103
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ T + + + + ++ I+
Sbjct: 104 LFSGEGAQAAQTAPVQEGVQQEGAQQPAPATAPSQGGINSPVNVTTTVDANTSLAKIENA 163
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
I+ + +G+ +R+ +D + + +
Sbjct: 164 IRMISDQRANLGAFQNRLESIKDSTEYAIENL 195
>gi|119389099|pdb|2D4X|A Chain A, Crystal Structure Of A 26k Fragment Of Hap3 (Flgl)
Length = 248
Score = 41.3 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 40/156 (25%)
Query: 41 ADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE 100
+D+ S A ++ S + A + KV + ++ +S+ + T + KI
Sbjct: 2 SDDPIAASQAVVLSQAQAQNSQYALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGN 61
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
S T LQ + ++ N G T +
Sbjct: 62 GTLSDDDRASLATDLQGIRDQLMNLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKS 121
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKI 196
V + + + +
Sbjct: 122 VTQQVDSARTMVIGHTGAQIFNSITSNAVPEPDGSD 157
>gi|34558559|gb|AAQ75045.1| flagellin [Borrelia garinii]
gi|34558561|gb|AAQ75046.1| flagellin [Borrelia garinii]
gi|34558565|gb|AAQ75048.1| flagellin [Borrelia garinii]
gi|166406994|gb|ABY87466.1| flagellin [Borrelia garinii]
gi|166406996|gb|ABY87467.1| flagellin [Borrelia garinii]
Length = 195
Score = 41.3 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 11/152 (7%), Positives = 37/152 (24%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + T+ G + + A+ S N + +
Sbjct: 44 SNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVAN 103
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ T + + + + ++ I+
Sbjct: 104 LFSGEGAQAAQTAPVQEGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENA 163
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
I+ + +G+ +R+ +D + + +
Sbjct: 164 IRMISDQRANLGAFQNRLESIKDSTEYAIENL 195
>gi|64419948|gb|AAY41409.1| flagellin [Borrelia garinii]
Length = 200
Score = 41.3 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|34558555|gb|AAQ75043.1| flagellin [Borrelia afzelii]
gi|89994676|dbj|BAE87010.1| flagellin [Borrelia afzelii]
Length = 195
Score = 41.3 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 10/160 (6%), Positives = 36/160 (22%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 36 QYNQMHMLSNKSASQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 95
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
S + + +
Sbjct: 96 IYSANVANLFAGEGAQAAQAAPVQEGAQEEGAQQPTPATAPTQGGVNSPVNVTTTVDANT 155
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
++ I+ I+ + +G+ +R+ ++ + + +
Sbjct: 156 SLAKIENAIRMISDQRANLGAFQNRLESIKNSTEYAIENL 195
>gi|313585285|gb|ADR70850.1| flagellin [Borrelia garinii]
Length = 200
Score = 41.3 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|81251594|gb|ABB69945.1| flagellin [Borrelia garinii]
Length = 195
Score = 41.3 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 11/160 (6%), Positives = 39/160 (24%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 36 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 95
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 96 IYAANVANLFSGEGAQAAQTAPVQDGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 155
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
++ I+ I+ + +G+ +R+ +D + + +
Sbjct: 156 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENL 195
>gi|298357220|emb|CBM40879.1| flagellin [Ralstonia pickettii]
Length = 154
Score = 41.3 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 36/106 (33%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + S L+ + + + IDT +
Sbjct: 49 NKLFDGSVTSTTFQYGQNAATDVTSVSNANLSTFGTLSGTSVTSTANATAAQAAIDTDLT 108
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
AA +G+ S ++ + + A+ L+D D ASE+
Sbjct: 109 NLKAARANLGAQQSGLNSTINTLTSNNTALSAAKSSLIDTDYASET 154
>gi|323697822|ref|ZP_08109734.1| flagellin domain-containing protein [Desulfovibrio sp. ND132]
gi|323457754|gb|EGB13619.1| flagellin domain-containing protein [Desulfovibrio desulfuricans
ND132]
Length = 281
Score = 41.3 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 3/138 (2%)
Query: 43 NAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER- 101
N +I+ ++ D A+ S+ +G +S + +A+ M+ +D ++ +++ I
Sbjct: 54 NPFEEAISGQLRGDAAAVRQASNNVGEAASMMGVARTDMATIVDALNDMEDMIDQINSGE 113
Query: 102 -GTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
S +QS+ L+ ++ S FNG T I +G
Sbjct: 114 LDGTSAVVQSDFDALRDKITGAISNSDFNGIAL-LDSSQWGTDQIDADGNVYIQSSKDGG 172
Query: 161 VQITTIDYYLDPETVLLD 178
IT V
Sbjct: 173 FNITFHSVDTPSSGVAWT 190
>gi|257062940|ref|YP_003142612.1| Predicted permease [Slackia heliotrinireducens DSM 20476]
gi|256790593|gb|ACV21263.1| Predicted permease [Slackia heliotrinireducens DSM 20476]
Length = 1232
Score = 40.9 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 34/339 (10%), Positives = 78/339 (23%), Gaps = 3/339 (0%)
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
Q E ++++ + +R +G
Sbjct: 64 STLGFDDEQIEAMSQVEGVKEVVGEREADVLATIRGTQYVVRIHGLDVDQAKASDTSDGV 123
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
++ + Y++ +L D L ++ PQ+ + V +
Sbjct: 124 NAVSADETYINRPILLEGEWPDEPGECVLAR-GAVLEDVPQIGDTVTVIDGTTDVDDTLT 182
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
+ T T + + V
Sbjct: 183 RRDFVVTGFVQTGYYVCTSNFGLTSLGTGTVDDYMYIMNEDFNPDMPYTGAFVTVEGARE 242
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
S+ + K + + ++ E + + K
Sbjct: 243 LNSTSEEYDGLVGKVRTRLEDMSGDLGDMRLAAVKRDAQDELDESRADYESEKADAESEL 302
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
+ A + K + + S + A ++G+ ++ + R
Sbjct: 303 ADAKSELDDAKGELDETKGELADAESELANAQSELADAQSELGAARRQLDDASAELSDAR 362
Query: 401 DAVEKGVGRLVD--ADMASESTRLSALQTQQQLAVQALS 437
+ G L D A +A L+ Q Q V L+
Sbjct: 363 SEIASGQAELDDAAAQIADGEAELADAQAQYDAGVAELA 401
>gi|64420092|gb|AAY41412.1| flagellin [Borrelia valaisiana]
gi|144600986|gb|ABP01650.1| flagellin [Borrelia valaisiana]
gi|218202710|gb|ACK75973.1| flagellin [Borrelia valaisiana]
Length = 200
Score = 40.9 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + FN +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQFNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L + A+
Sbjct: 61 MLSNKSAAQNVKTAE 75
>gi|313585299|gb|ADR70857.1| flagellin [Borrelia bissettii]
Length = 200
Score = 40.9 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVKTAE 75
>gi|313585283|gb|ADR70849.1| flagellin [Borrelia garinii]
Length = 200
Score = 40.9 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L A+
Sbjct: 61 MLSNKPAPQNVRTAE 75
>gi|313585273|gb|ADR70844.1| flagellin [Borrelia garinii]
Length = 200
Score = 40.9 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|307563596|gb|ADN52362.1| flagellin [Borrelia burgdorferi]
Length = 200
Score = 40.9 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|298356988|emb|CBM40875.1| flagellin [Ralstonia pickettii]
Length = 154
Score = 40.9 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 35/106 (33%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + + T + S L+ + + + IDT +
Sbjct: 49 NKLFDGSVTATTFQYGQNAATDVTSVSNANLSTFGTLSGTSVTSTANATAAQAAIDTDLT 108
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASES 419
AA +G+ S ++ + + A+ L+D D ASE+
Sbjct: 109 NLKAARANLGAQQSGLNSTINTLTSNNTALSAAKSSLIDTDYASET 154
>gi|294497859|ref|YP_003561559.1| flagellin domain-containing protein [Bacillus megaterium QM B1551]
gi|294347796|gb|ADE68125.1| flagellin domain protein [Bacillus megaterium QM B1551]
Length = 37
Score = 40.9 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 13/37 (35%)
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
MA E + Q + LS N +L L R
Sbjct: 1 MAKEMMEQTKNSILSQASQAMLSQANQQPQNVLQLLR 37
>gi|34558549|gb|AAQ75040.1| flagellin [Borrelia burgdorferi]
Length = 195
Score = 40.9 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 11/152 (7%), Positives = 37/152 (24%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + T+ G + + A+ S N + +
Sbjct: 44 SNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVAN 103
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ T + + + + ++ I+
Sbjct: 104 LFSGEGAQTAQAAPVQEGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENA 163
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
I+ + +G+ +R+ +D + + +
Sbjct: 164 IRMISDQRANLGAFQNRLESIKDSTEYAIENL 195
>gi|81251590|gb|ABB69943.1| flagellin [Borrelia garinii]
gi|81251592|gb|ABB69944.1| flagellin [Borrelia garinii]
gi|81251616|gb|ABB69956.1| flagellin [Borrelia valaisiana]
Length = 195
Score = 40.9 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 10/160 (6%), Positives = 39/160 (24%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + A T+ G + + A+ S N +
Sbjct: 36 QYNQMHMLSNKSAAQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 95
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + + +
Sbjct: 96 IYAANVANLFSGEGAQSAQAAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 155
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
++ I+ I+ + +G+ +R+ ++ + + +
Sbjct: 156 SLAKIENAIRMVSDQRANLGAFQNRLESIKNSTEYAIENL 195
>gi|81251604|gb|ABB69950.1| flagellin [Borrelia garinii]
gi|81251614|gb|ABB69955.1| flagellin [Borrelia garinii]
Length = 195
Score = 40.9 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 11/160 (6%), Positives = 39/160 (24%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 36 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 95
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 96 IYAANVANLFSGEGAQATQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 155
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
++ I+ I+ + +G+ +R+ +D + + +
Sbjct: 156 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENL 195
>gi|160878767|ref|YP_001557735.1| hypothetical protein Cphy_0609 [Clostridium phytofermentans ISDg]
gi|160427433|gb|ABX40996.1| conserved hypothetical protein [Clostridium phytofermentans ISDg]
Length = 772
Score = 40.9 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 23/178 (12%), Positives = 64/178 (35%), Gaps = 6/178 (3%)
Query: 5 LTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVS 64
LTN ++ L++ + L + +SSG + +D +K+ L
Sbjct: 364 LTNEKNIANLNALKNASSALNTGVNSLSSG--IHTLSD---GAQNLTQLKNSITELKNGL 418
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTI-KNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ G++ + + ++ ++ + + A + + S+ + ++ L + +A
Sbjct: 419 ISAKQGATSLALGAGNLNAGLNTLYSAGGEFTKATSQLTIGATSLNNGLSSLTKGIDTLA 478
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
GS+ + + G+S+ + + S + + E V ++
Sbjct: 479 VGSTSLYNGADKLNNGASSLGEGMNTLISGVTTLDDGASQLKDGITTANEGVKTSINS 536
>gi|166406998|gb|ABY87468.1| flagellin [Borrelia afzelii]
Length = 195
Score = 40.9 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 10/152 (6%), Positives = 35/152 (23%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + T+ G + + A+ S N ++ S
Sbjct: 44 SNKSASQNVKTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEANAVNIYSANVAN 103
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ + + ++ I+
Sbjct: 104 LFAGEGAQAAQAAPVQEGAQEEGAQQPTPATAPTQGGVNSPVNVTTTVDANTSLAKIENA 163
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
I+ + +G+ +R+ ++ + + +
Sbjct: 164 IRMISDQRANLGAFQNRLESIKNSTEYAIENL 195
>gi|109727141|gb|ABG45876.1| Fla [Borrelia garinii]
Length = 200
Score = 40.9 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|109727143|gb|ABG45877.1| Fla [Borrelia miyamotoi]
gi|109727155|gb|ABG45883.1| Fla [Borrelia miyamotoi]
gi|218202704|gb|ACK75970.1| flagellin [Borrelia miyamotoi]
gi|307563610|gb|ADN52369.1| flagellin [Borrelia miyamotoi]
gi|307563612|gb|ADN52370.1| flagellin [Borrelia miyamotoi]
gi|307563614|gb|ADN52371.1| flagellin [Borrelia miyamotoi]
gi|307563616|gb|ADN52372.1| flagellin [Borrelia miyamotoi]
gi|313585307|gb|ADR70861.1| flagellin [Borrelia miyamotoi]
Length = 198
Score = 40.9 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L + A+
Sbjct: 61 MLSNKSAAQNVKTAE 75
>gi|313585281|gb|ADR70848.1| flagellin [Borrelia garinii]
Length = 200
Score = 40.9 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|229837424|ref|ZP_04457587.1| Flagellin protein flaA [Yersinia pestis Pestoides A]
gi|229705547|gb|EEO91557.1| Flagellin protein flaA [Yersinia pestis Pestoides A]
Length = 54
Score = 40.9 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 399 MRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSLFRG 452
M + +G + D D A E + + Q +V L N +T I +L +G
Sbjct: 1 MISNTAQALGSIKDTDFADEMKNHAQSEMLMQSSVMMLKKANAATQLISTLLQG 54
>gi|4426547|dbj|BAA20928.1| flagellin protein [Borrelia garinii]
gi|4426549|dbj|BAA20930.1| flagellin protein [Borrelia garinii]
gi|34558567|gb|AAQ75049.1| flagellin [Borrelia garinii]
gi|81251588|gb|ABB69942.1| flagellin [Borrelia afzelii]
gi|81251596|gb|ABB69946.1| flagellin [Borrelia garinii]
gi|81251598|gb|ABB69947.1| flagellin [Borrelia garinii]
gi|81251600|gb|ABB69948.1| flagellin [Borrelia garinii]
gi|81251602|gb|ABB69949.1| flagellin [Borrelia garinii]
gi|81251608|gb|ABB69952.1| flagellin [Borrelia garinii]
gi|81251610|gb|ABB69953.1| flagellin [Borrelia garinii]
gi|81251619|gb|ABB69957.1| flagellin [Borrelia valaisiana]
Length = 195
Score = 40.9 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 11/160 (6%), Positives = 39/160 (24%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 36 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 95
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 96 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 155
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
++ I+ I+ + +G+ +R+ +D + + +
Sbjct: 156 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENL 195
>gi|1165196|gb|AAC43560.1| orf5; similar to the Pseudomonas aeruginosa FlaA flagellin
protein, PIR Accession Number A37853; Method:
conceptual translation supplied by author [Vibrio
cholerae]
Length = 36
Score = 40.9 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSI 49
+ L + +R+SSG +++ A D+AA I
Sbjct: 1 QRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQI 36
>gi|313585267|gb|ADR70841.1| flagellin [Borrelia garinii]
Length = 200
Score = 40.9 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|307563578|gb|ADN52353.1| flagellin [Borrelia garinii]
gi|307563582|gb|ADN52355.1| flagellin [Borrelia garinii]
Length = 200
Score = 40.9 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|109727151|gb|ABG45881.1| Fla [Borrelia garinii]
gi|218202708|gb|ACK75972.1| flagellin [Borrelia garinii]
Length = 200
Score = 40.9 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|313585291|gb|ADR70853.1| flagellin [Borrelia burgdorferi]
Length = 200
Score = 40.9 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|307563584|gb|ADN52356.1| flagellin [Borrelia garinii]
Length = 200
Score = 40.9 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|307563580|gb|ADN52354.1| flagellin [Borrelia garinii]
Length = 200
Score = 40.9 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|64419909|gb|AAY41408.1| flagellin [Borrelia burgdorferi]
gi|64420146|gb|AAY41413.1| flagellin [Borrelia burgdorferi]
gi|218202712|gb|ACK75974.1| flagellin [Borrelia burgdorferi]
gi|307563598|gb|ADN52363.1| flagellin [Borrelia burgdorferi]
Length = 200
Score = 40.9 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|307563600|gb|ADN52364.1| flagellin [Borrelia valaisiana]
Length = 200
Score = 40.9 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGKLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L + A+
Sbjct: 61 MLSNKSAAQNVKTAE 75
>gi|34558563|gb|AAQ75047.1| flagellin [Borrelia garinii]
Length = 195
Score = 40.9 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 11/160 (6%), Positives = 39/160 (24%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 36 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 95
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 96 IYAANVANLFSSEGAQAAQTAPVQDGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 155
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
++ I+ I+ + +G+ +R+ +D + + +
Sbjct: 156 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENL 195
>gi|302830979|ref|XP_002947055.1| hypothetical protein VOLCADRAFT_87299 [Volvox carteri f.
nagariensis]
gi|300267462|gb|EFJ51645.1| hypothetical protein VOLCADRAFT_87299 [Volvox carteri f.
nagariensis]
Length = 3165
Score = 40.9 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 26/293 (8%), Positives = 48/293 (16%), Gaps = 26/293 (8%)
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
S L I ++F L D + + R + T LD
Sbjct: 111 SALDRIWHWTAFGTGPHLALDRTWHWTAFGTGPHLALDRTWHWTALGTGPHLALDRIWHW 170
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAAN 236
T + P + D + +
Sbjct: 171 TAFGTGPHSALDRIWHWTAFGTGPHLALDRIRHWTAFGTGPHLALDRTWHWTAFGTGPHL 230
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTT-SGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
A A P A + T GT + T G R
Sbjct: 231 ALDRIWHWTALGTGPHLALDRIWHWTAFGTGPHLALDRIWHWTAFGTGPHLALDRIWHWT 290
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
+ + P + +
Sbjct: 291 AFGTGPHLALDRTWHWTAFGTGPHLALDRIWHWTAFGTGPHLALDRIWHWTAFGTGPHLA 350
Query: 356 NEKLAMEEMVS-----FID--------------------TQIKCATAAAGKIG 383
++ + +D + + +G
Sbjct: 351 LDRTRHWTALGTGPHLALDRTWRVGCTLHTPNTHCTPSKGALCEVASYRANLG 403
>gi|157164686|ref|YP_001467099.1| hypothetical protein CCC13826_2187 [Campylobacter concisus 13826]
gi|112799944|gb|EAT97288.1| flagellin [Campylobacter concisus 13826]
Length = 294
Score = 40.9 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 3/109 (2%)
Query: 45 AYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE---R 101
A IA+ + S L+ + IA + + + I +
Sbjct: 85 ANLQIAESLLSQTNVLNEGMANANDMIGMLQIADSTLLNLSESADKIGELSSKLSNPALS 144
Query: 102 GTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVI 150
+ K I+ EI L++ + D + + FNG+N +LG T K++
Sbjct: 145 ANEQKGIKGEINALKNAMSDSVKEAKFNGKNVFDAELGFFTGEGTKNIN 193
>gi|34558576|gb|AAQ75050.1| flagellin [Borrelia burgdorferi]
Length = 195
Score = 40.5 bits (92), Expect = 0.51, Method: Composition-based stats.
Identities = 10/160 (6%), Positives = 39/160 (24%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 36 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 95
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 96 IYAANVANLFSGEGAQTAQAAPVQEGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 155
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
++ I+ I+ + +G+ +R+ ++ + + +
Sbjct: 156 SLAKIENAIRMISDQRANLGAFQNRLESIKNSTEYAIENL 195
>gi|81251606|gb|ABB69951.1| flagellin [Borrelia garinii]
Length = 195
Score = 40.5 bits (92), Expect = 0.51, Method: Composition-based stats.
Identities = 10/160 (6%), Positives = 39/160 (24%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 36 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 95
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 96 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 155
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
++ I+ I+ + +G+ +R+ ++ + + +
Sbjct: 156 SLAKIENAIRMISDQRANLGAFQNRLESIKNSTEYAIENL 195
>gi|237799218|ref|ZP_04587679.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331022073|gb|EGI02130.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 490
Score = 40.5 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 24/216 (11%), Positives = 52/216 (24%)
Query: 42 DNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER 101
D+ + + N L+ IG ++ V + +S ID M +++I +
Sbjct: 1 DDPVGAARVLQLAQQNSMLNQYEGNIGTINTNVVTTETTLSSIIDTMQAARDEIVSAANG 60
Query: 102 GTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV 161
++ L+ I + N GS ++ S G
Sbjct: 61 AYTDSDRLAKAAALKQYQGQILGLMNSQDPNGKYIFAGSKASTPPYSQNADGSYSYKGDQ 120
Query: 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKK 221
+ + D E+ R + P + +
Sbjct: 121 TSINLAVGDGLVMASNTTGFDAFEQAVNTTRTSSTLMSPAIDDGKVSLSGGLVTSTPVYN 180
Query: 222 FKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+ + T + V +
Sbjct: 181 SSYQGGEPYTMTFLSGTQFKITDATGTDVTTDTSSG 216
>gi|298357218|emb|CBM40878.1| flagellin [Ralstonia pickettii]
Length = 152
Score = 40.5 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 35/105 (33%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + S L+ + + + IDT +
Sbjct: 48 NKLFDGSVTSTTFQYGQNAATDVTSVSNANLSTFGTLSGTSVTSTANATAAQAAIDTDLT 107
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
AA +G+ S ++ + + A+ L+D D ASE
Sbjct: 108 NLKAARANLGAQQSGLNSTINTLTSNNTALSAAKSSLIDTDYASE 152
>gi|895784|emb|CAA61527.1| flagellin [Campylobacter upsaliensis]
Length = 436
Score = 40.5 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 39/116 (33%), Gaps = 3/116 (2%)
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
M + + ++ TIK K T + G +Q++I +L +L +IA +SFNG+ L
Sbjct: 1 DKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLL 60
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+ I + + ++ SS
Sbjct: 61 SGGFINQEFQIGSQSNQTIKATIGPTQSNKIGLTRFETGAQIIKSSEVEMVIKNYN 116
>gi|4426546|dbj|BAA20927.1| flagellin protein [Borrelia garinii]
Length = 195
Score = 40.5 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 11/160 (6%), Positives = 39/160 (24%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 36 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 95
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 96 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 155
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
++ I+ I+ + +G+ +R+ +D + + +
Sbjct: 156 SLAEIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENL 195
>gi|313585301|gb|ADR70858.1| flagellin [Borrelia spielmanii]
Length = 200
Score = 40.5 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVKTAE 75
>gi|64420189|gb|AAY41414.1| flagellin [Borrelia sp. 6T04-2]
gi|226222470|gb|ACO38653.1| flagellin [Borrelia miyamotoi]
gi|226222472|gb|ACO38654.1| flagellin [Borrelia miyamotoi]
Length = 198
Score = 40.5 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L + A+
Sbjct: 61 MLSNKSAAQNVKTAE 75
>gi|442489|dbj|BAA05154.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Abony]
gi|442492|dbj|BAA05156.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Typhimurium]
Length = 24
Score = 40.5 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 1 LQQAGTSVLAQANQVPQNVLSLLR 24
>gi|64419992|gb|AAY41410.1| flagellin [Borrelia garinii]
Length = 200
Score = 40.5 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D IQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGFIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|313585289|gb|ADR70852.1| flagellin [Borrelia garinii]
Length = 200
Score = 40.5 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|307563570|gb|ADN52349.1| flagellin [Borrelia garinii]
gi|307563574|gb|ADN52351.1| flagellin [Borrelia garinii]
gi|307563576|gb|ADN52352.1| flagellin [Borrelia garinii]
gi|313585275|gb|ADR70845.1| flagellin [Borrelia garinii]
Length = 200
Score = 40.5 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|109727145|gb|ABG45878.1| Fla [Borrelia garinii]
Length = 200
Score = 40.5 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|4426548|dbj|BAA20929.1| flagellin protein [Borrelia garinii]
Length = 195
Score = 40.5 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 11/160 (6%), Positives = 39/160 (24%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 36 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 95
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 96 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPANVTTTVDANT 155
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
++ I+ I+ + +G+ +R+ +D + + +
Sbjct: 156 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENL 195
>gi|313585269|gb|ADR70842.1| flagellin [Borrelia garinii]
Length = 200
Score = 40.5 bits (92), Expect = 0.58, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|307563572|gb|ADN52350.1| flagellin [Borrelia garinii]
gi|307563586|gb|ADN52357.1| flagellin [Borrelia garinii]
gi|307563588|gb|ADN52358.1| flagellin [Borrelia garinii]
gi|313585277|gb|ADR70846.1| flagellin [Borrelia garinii]
Length = 200
Score = 40.5 bits (92), Expect = 0.58, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|163794164|ref|ZP_02188137.1| flagellar hook-associated protein [alpha proteobacterium BAL199]
gi|159180778|gb|EDP65297.1| flagellar hook-associated protein [alpha proteobacterium BAL199]
Length = 339
Score = 40.5 bits (92), Expect = 0.59, Method: Composition-based stats.
Identities = 24/205 (11%), Positives = 56/205 (27%), Gaps = 11/205 (5%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVS-----DAADNAAYWSIAQIMKSDNG 58
I T + + I + Q ++S+G + D + +K
Sbjct: 3 ISTVTQNLRIDNSITSIQRKIADAQQQISTGKKSQVYSGFSGQD----VRLLVSLKEQRT 58
Query: 59 ALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER--GTDSKSIQSEITQLQ 116
++ + D I K A + D+ ++ K+ VE S ++ +
Sbjct: 59 SVQSYVDTINNTKVKTTTIDASLVTFTDITQDLRKKMYEQVEGLFDNSSLALATYANAAI 118
Query: 117 SQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVL 176
QL ++ +S + D + A + ++ G +
Sbjct: 119 DQLTNLLNQTSGGQFLFNGADTDTQPLLSATASKAAYAAHVFGALGPGQPALSAGAGATD 178
Query: 177 LDSSTDGTERYGLLDRNHKIKVEPQ 201
+ + + N
Sbjct: 179 VIAFVEDFFSTDANWNNVTAPAPGS 203
>gi|298357224|emb|CBM40881.1| flagellin [Ralstonia pickettii]
Length = 153
Score = 40.5 bits (92), Expect = 0.60, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 35/105 (33%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + S L+ + + + IDT +
Sbjct: 49 NKLFDGSVTSTTFQYGQNAATDVTSVSNANLSTFGTLSGTSVTSTANATAAQAAIDTDLT 108
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
AA +G+ S ++ + + A+ L+D D ASE
Sbjct: 109 NLKAARANLGAQQSGLNSTINTLTSNNTALSAAKSSLIDTDYASE 153
>gi|298356984|emb|CBM40873.1| flagellin [Ralstonia pickettii]
gi|298356992|emb|CBM40877.1| flagellin [Ralstonia pickettii]
gi|298357222|emb|CBM40880.1| flagellin [Ralstonia pickettii]
Length = 153
Score = 40.5 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 35/105 (33%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + S L+ + + + IDT +
Sbjct: 49 NKLFDGSVTSTTFQYGQNAATDVTSVSNANLSTFGTLSGTSVTSTANATAAQAAIDTDLT 108
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
AA +G+ S ++ + + A+ L+D D ASE
Sbjct: 109 NLKAARANLGAQQSGLNSTINTLTSNNTALSAAKSSLIDTDYASE 153
>gi|34558551|gb|AAQ75041.1| flagellin [Borrelia burgdorferi]
Length = 195
Score = 40.5 bits (92), Expect = 0.65, Method: Composition-based stats.
Identities = 11/160 (6%), Positives = 40/160 (25%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 36 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 95
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ ++ T + + + +
Sbjct: 96 IYAANVANLSSGEGAQTAQAAPVQEGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 155
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
++ I+ I+ + +G+ +R+ +D + + +
Sbjct: 156 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENL 195
>gi|213421024|ref|ZP_03354090.1| flagellar hook-associated protein FlgL [Salmonella enterica
subsp. enterica serovar Typhi str. E01-6750]
Length = 83
Score = 40.1 bits (91), Expect = 0.65, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 34/81 (41%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + + +++S+G RV++ +D+ S A ++ S
Sbjct: 3 ISTQMMYEQNMSGITNSQAEWMKLGEQMSTGKRVTNPSDDPIAASQAVVLFQAQAQNSQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKA 84
+ A + KV + ++ +S+
Sbjct: 63 ALARTFATQKVSLEESVLSQV 83
>gi|332528878|ref|ZP_08404849.1| flagellin domain-containing protein [Hylemonella gracilis ATCC
19624]
gi|332041671|gb|EGI78026.1| flagellin domain-containing protein [Hylemonella gracilis ATCC
19624]
Length = 88
Score = 40.1 bits (91), Expect = 0.66, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 24/76 (31%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
D+ + + S + T ++ + + +D+ + +
Sbjct: 13 DSNKSFVISHTTTVAASSAYIGTDTASVLHKVADLDVTSVAKANDAIKTVDSALAFISGE 72
Query: 379 AGKIGSISSRIHLQED 394
K+G++ SR +
Sbjct: 73 RAKLGALQSRFESTIN 88
>gi|34558557|gb|AAQ75044.1| flagellin [Borrelia garinii]
Length = 195
Score = 40.1 bits (91), Expect = 0.67, Method: Composition-based stats.
Identities = 11/160 (6%), Positives = 39/160 (24%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 36 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 95
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 96 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNATTTVDANT 155
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAV 403
++ I+ I+ + +G+ +R+ +D + + +
Sbjct: 156 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIENL 195
>gi|217065|dbj|BAA02072.1| phase 2 flagellin [Salmonella enterica subsp. enterica serovar
Abortusequi]
Length = 24
Score = 40.1 bits (91), Expect = 0.68, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
QQ L+ N +LSL R
Sbjct: 1 LQQAGTSVLAQANQVPLNVLSLLR 24
>gi|313585293|gb|ADR70854.1| flagellin [Borrelia burgdorferi]
Length = 200
Score = 40.1 bits (91), Expect = 0.69, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ ++ D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMEELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|227871685|ref|ZP_03990097.1| hypothetical protein HMPREF6123_0036 [Oribacterium sinus F0268]
gi|227842465|gb|EEJ52683.1| hypothetical protein HMPREF6123_0036 [Oribacterium sinus F0268]
Length = 409
Score = 40.1 bits (91), Expect = 0.69, Method: Composition-based stats.
Identities = 20/192 (10%), Positives = 54/192 (28%), Gaps = 2/192 (1%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+ +++ L ++VS+G + A +N + + M + + I +++
Sbjct: 15 SVGNLHGKLNESMEQVSTGRKYKAADENPIAYYAGKRMDNQYMDAESKKGIIDDVKNRLY 74
Query: 76 IAKAGMSKAIDVM--STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
+ G + M K + + + ++ + T+ +L + + +N+
Sbjct: 75 QQEKGALSIQEDMRAVNTKVLAISNDSQNANEGTVGTYETEFTQRLHSVVNTLNSQYDNF 134
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
T + + + T T L + Y
Sbjct: 135 YVYGGNDMTTVPFSLKEDLNGTNPSITLTYTHKFPGDSKATELNIKYSYDGTNYKNEFSG 194
Query: 194 HKIKVEPQVLKD 205
D
Sbjct: 195 TDADGNALNEND 206
>gi|109727139|gb|ABG45875.1| Fla [Borrelia valaisiana]
Length = 200
Score = 40.1 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDSDRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L + A+
Sbjct: 61 MLSNKSAAQNVKTAE 75
>gi|256371027|ref|YP_003108851.1| flagellar hook-associated protein 3 [Acidimicrobium ferrooxidans
DSM 10331]
gi|256007611|gb|ACU53178.1| flagellar hook-associated protein 3 [Acidimicrobium ferrooxidans
DSM 10331]
Length = 301
Score = 40.1 bits (91), Expect = 0.74, Method: Composition-based stats.
Identities = 19/175 (10%), Positives = 47/175 (26%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G + +DN A ++ A + G + +A + +++A+ ++ ++
Sbjct: 35 GQAIQAPSDNPAGTVNLLGAQTQLAAYQQYQSNLSYGQTVAQLANSSLTQAVSIVQQARS 94
Query: 94 KITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSF 153
+ G S+ TQLQ + ++ E + A+ G
Sbjct: 95 VLLQAGAPGVTSQVASGLATQLQGLETSLLGVANTTYEGQAIFAGTADVATAYVQPGGPG 154
Query: 154 IRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDV 208
Q + + + + L +
Sbjct: 155 TAVTYQGNQQSATVAGAPGVALATSLADPFGASSPTGGVFAALNQAISDLSSGNT 209
>gi|313585271|gb|ADR70843.1| flagellin [Borrelia garinii]
Length = 200
Score = 40.1 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SIQ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRAAE 75
>gi|209491057|gb|ACI49682.1| flagellin [Borrelia burgdorferi]
Length = 194
Score = 40.1 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 11/151 (7%), Positives = 36/151 (23%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + T+ G + + A+ S N + +
Sbjct: 44 SNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVNIYAANVAN 103
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ T + + + + ++ I+
Sbjct: 104 LFSGEGAQTAQAAPVQEGVQQEGARQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENA 163
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
I+ + +G+ +R+ +D + +
Sbjct: 164 IRMISDQRANLGAFQNRLESIKDSTEYAIEN 194
>gi|238796910|ref|ZP_04640414.1| Flagellin and hook-associated protein [Yersinia mollaretii ATCC
43969]
gi|238719170|gb|EEQ10982.1| Flagellin and hook-associated protein [Yersinia mollaretii ATCC
43969]
Length = 298
Score = 40.1 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 1/168 (0%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
+ + + ++S+ + +D+ A S A I ++ + A +
Sbjct: 7 NSMSNAMNAGNDIYMQLSAQRTLLTPSDDPAGASQAVIYQNALANMQQFDTARLYAQDAL 66
Query: 75 DIAKAGMSKAIDVMST-IKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
+ ++ +++ + KI AG Q+ T+LQ ++ + N
Sbjct: 67 EQEDNTLTSIGHLLTENLSKKIVAGGNGALSDADRQALATELQGIRDNLLDLGNTTNSNG 126
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
G T S G+++ D Q + + D
Sbjct: 127 RYIFGGYKTGSAPFEKDGTYVGGDTAMTQHVADSTEMQVGHIGSDVFM 174
>gi|87118340|ref|ZP_01074239.1| flagellin [Marinomonas sp. MED121]
gi|86165974|gb|EAQ67240.1| flagellin [Marinomonas sp. MED121]
Length = 365
Score = 40.1 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 26/309 (8%), Positives = 78/309 (25%)
Query: 142 TASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQ 201
T++ + + T + S + + N K + Q
Sbjct: 55 TSTPVADNQANAGTNQTHSGVETAREITRTGGAQDDLSRGNLARDAYVDKLNTKHISQQQ 114
Query: 202 VLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNT 261
+ + T+ + TT + + A + + +
Sbjct: 115 ADTTFQQINPNQKEALLTRSIERLTTEINKNQKQISNTVNAYSMIQVANDSLSEIQGGLK 174
Query: 262 TSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTE 321
+ + + I + + G+ +T
Sbjct: 175 ELSSLAQAATGERKEGQSEEDFLAQTEETQAQALDIVAGIQDLFESTKYGGDPLLTQNTH 234
Query: 322 STTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGK 381
T + S +++ + N +++E ++ I + +
Sbjct: 235 QTFASHNETEYGVTVSTHNVDRKFEQQGLYEIDLNSPGSIQESMTAIKGSMDVVRDIQSQ 294
Query: 382 IGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+ + + + + ++ ++ R+ D A + + + L+ N
Sbjct: 295 YRAQETDFNTKMKKLFNTQEQLDSMHDRITSTDFAIQVAEKAQQEMVNNARGSVLAQANA 354
Query: 442 STARILSLF 450
+ R L+L
Sbjct: 355 DSNRALNLL 363
>gi|302387757|ref|YP_003823579.1| Flagellin and related hook-associated protein-like protein
[Clostridium saccharolyticum WM1]
gi|302198385|gb|ADL05956.1| Flagellin and related hook-associated protein-like protein
[Clostridium saccharolyticum WM1]
Length = 337
Score = 40.1 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 34/111 (30%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I TN L NL + + RV + + A++ + A + +
Sbjct: 3 ITTNAILRDYKSNLAATIDNLNLSRTRVMTQRSFNSVAEDPGSAARASQLHRKYYKIQDN 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQ 114
+ S+ D + +++ +++ TI G +
Sbjct: 63 LSMLTDIQSRQDGQEGALTQVSNMVKTISEDYNVQAMSGDKQTPETRQTFA 113
>gi|283953913|ref|ZP_06371442.1| flagellin [Campylobacter jejuni subsp. jejuni 414]
gi|283794518|gb|EFC33258.1| flagellin [Campylobacter jejuni subsp. jejuni 414]
Length = 248
Score = 39.7 bits (90), Expect = 0.86, Method: Composition-based stats.
Identities = 17/193 (8%), Positives = 51/193 (26%), Gaps = 2/193 (1%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
M + L + + + +++ +S ++A +IA ++S + +
Sbjct: 8 MQQNYYLNNAQKASDKALENIAAVRAISGV--DSANLAIADSLRSQSSTIDQGVANAYDA 65
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+ IA A ++ + + + + I +
Sbjct: 66 IGVLQIADASLTNISQSADKLNQLSVKMNNAALNDSQKEMLRAEATRIQESINDSFNNAT 125
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
N + + + ++ I D + L ++ +
Sbjct: 126 YNGKNVFQTMNFVVGNGTETTNLNPLATDELSIDNQDSITNFMDQLGSLRSEIGSGINAI 185
Query: 191 DRNHKIKVEPQVL 203
N V+ +
Sbjct: 186 TSNINASVQNSIN 198
>gi|2360974|gb|AAB69136.1| flagellin [Pseudomonas aeruginosa]
Length = 37
Score = 39.7 bits (90), Expect = 0.86, Method: Composition-based stats.
Identities = 5/36 (13%), Positives = 12/36 (33%)
Query: 46 YWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
I+ + + L+ + G S A+ +
Sbjct: 1 GLQISNRLSNQISGLNVATRNANDGISLAQTAEGAL 36
>gi|296196252|ref|XP_002745736.1| PREDICTED: coiled-coil domain-containing protein 158 [Callithrix
jacchus]
Length = 1113
Score = 39.7 bits (90), Expect = 0.94, Method: Composition-based stats.
Identities = 39/404 (9%), Positives = 107/404 (26%), Gaps = 16/404 (3%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+L+ LE ++ + S + +D A +A M+ A DA+ ++
Sbjct: 700 QLKSAQSELEQTRNTLKS----MEGSDGHA-MKVAMGMQKQITAKRGQIDALQSKIQFLE 754
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVER-GTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
A +K + K+K++ + + + E+ L+SQ R + +
Sbjct: 755 EAMTNANKEKHFLKEEKSKLSQELNTVAIEKNKMAGELEVLRSQERHLKEKVTNMEVALD 814
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+ L + G + + + T + + +
Sbjct: 815 KASLQFAECQDIIQRQGQESVRLKLQHTLDIKELQGPGYTSNSSMKPRLLQPASVTRSHS 874
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ + A+ L N ++
Sbjct: 875 NVPSSQSTTSFLSHHSMKANTLKEDPTRDLKQLLQELRSVINEEPAMSRSKTEEDGRTSL 934
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
+ S S + + +S +++ +S + G
Sbjct: 935 GAIEDRVRVCITESSLRSDMCHRSNNSIRDSTEGRKSSETHSREPVTLHAGDMEDPSGCF 994
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ--- 371
+ + +S L + +L + + + + + D+
Sbjct: 995 TFASAASPSVKNSTSRLFNSSPKRSPVHSLLTSSVEGSVGSTSQYRSTKPIHSSDSIKDL 1054
Query: 372 ----IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
I+ A K+ +R+ + ++ ++ + +
Sbjct: 1055 QSPPIETTGKACRKL---QNRLESLQTLVEDLQLKNQAMSSMIR 1095
>gi|209491051|gb|ACI49679.1| flagellin [Borrelia burgdorferi]
gi|209491055|gb|ACI49681.1| flagellin [Borrelia burgdorferi]
gi|209491059|gb|ACI49683.1| flagellin [Borrelia burgdorferi]
Length = 194
Score = 39.7 bits (90), Expect = 0.98, Method: Composition-based stats.
Identities = 11/159 (6%), Positives = 38/159 (23%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 36 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 95
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 96 IYAANVANLFSGEGAQTAQAAPVQEGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 155
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
++ I+ I+ + +G+ +R+ +D + +
Sbjct: 156 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIEN 194
>gi|298357234|emb|CBM40886.1| flagellin [Ralstonia insidiosa]
Length = 153
Score = 39.7 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 32/100 (32%)
Query: 319 DTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ ++T + + L ++ + + ID + AA
Sbjct: 54 GSVTSTTFQYGQNSATDVATVTNANLASFGTLSSTSVTSTANATAAQAKIDADLASLKAA 113
Query: 379 AGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASE 418
+G+ S + + + A+ +VD D ASE
Sbjct: 114 RADLGAQQSGLSSTINTLTSSNTALSAAKSAMVDTDYASE 153
>gi|83944167|ref|ZP_00956623.1| flagellar hook-associated protein [Sulfitobacter sp. EE-36]
gi|83845034|gb|EAP82915.1| flagellar hook-associated protein [Sulfitobacter sp. EE-36]
Length = 359
Score = 39.7 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 36/319 (11%), Positives = 80/319 (25%), Gaps = 1/319 (0%)
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L+ ++ S + + DLG AS+ K +
Sbjct: 27 ELQRVSEEVSTGKKADIYADLGPRAASVMKLHGREANTQTFMTSNDVLASKLDAMLASVD 86
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS-TKKFKLATTSGAWLKAAN 236
+ T N + + S + +
Sbjct: 87 AARTQVQSVLESALVNATRNGNGAEVLQMQARAALESLVSTMNTSYNGENLFSGLESNKT 146
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
+ + A + T T + + ++A + R
Sbjct: 147 SLTRWPETSADTGRSPQSVVEEIFGTGPTDPASAQAIADQLETVFNSQDADASRNFQGTF 206
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
P S + + + R + D+ + L +T + D
Sbjct: 207 YQGSPERDASGAETKQISAWVNTGQEVVYGVRANDQSFRDAYKGLAMLAVTDVSQMDEAA 266
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
M E+V + + + +IG + + + + + D
Sbjct: 267 YSTWMSEVVDSLSASQEGMLDISARIGFNQQIVEKTQTQLTDLSLVQRTQISNYESVDPY 326
Query: 417 SESTRLSALQTQQQLAVQA 435
TR+++L+TQ Q + Q
Sbjct: 327 EAITRMNSLETQLQASYQV 345
>gi|268318708|ref|YP_003292364.1| putative secreted protein [Lactobacillus johnsonii FI9785]
gi|262397083|emb|CAX66097.1| putative secreted protein [Lactobacillus johnsonii FI9785]
Length = 953
Score = 39.7 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 35/470 (7%), Positives = 116/470 (24%), Gaps = 42/470 (8%)
Query: 15 QKLRDINYNLEVVQDRVSSGLR--------VSD------AADNAAYWSIAQIMKSDNGAL 60
Q + D N +L Q ++S+ + V+ ADN + A + S
Sbjct: 149 QNVSDANADLSTAQSQLSTAKQKQADAQNLVNSKEAAKKTADNNVASAEAAVKNSGLDEA 208
Query: 61 SAVSDAIGLG-----------SSKVDIAKAGMSK-------AIDVMSTIKNKITAGVERG 102
+ S + +A +++ + ++ +
Sbjct: 209 KQNVQNVQNALKEIKKTNADNKSVLSKKQAALAENIQTIATVNNNLAMANKALVDAQNNV 268
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
+ ++ + L+D A G++ + S + + I Q
Sbjct: 269 NAKQKALADAQKALKDLQDQASGAAGFFKAIADNKDNSESLREDAQTAYNIITGQPNAYQ 328
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
T+++ + + ++ + ++ + + + +
Sbjct: 329 NITVEWAKEAVKLGQENDSTSLSNIEKALGYYQHWMTYRDKYGLRHPSISLTAVAIAMLS 388
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
+ + + + A P +
Sbjct: 389 SDFQHYSDEFNHPSLLTSKYGPFYSDEEDISAGEVNPIDNWMSEKDDIDKYIEGHPDAAA 448
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTH--------YYVDTESTTLDSRKDLPKE 334
+ + T + + V T + + +
Sbjct: 449 YSFESTHPLTQDEWEKDVDFWNDKPVYIGHYTSMIKPDANYVGLAGNEYEIQPMMNNADS 508
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+D + ++ + L + I+ A + + + + ++
Sbjct: 509 MDEIIFNPINGMDFNSYQNLVQSYLKDVKQEDKINILKANVATANQNLVAAQNAVKSAQN 568
Query: 395 FIKLMRDAVEKGVGRLVDAD--MASESTRLSALQTQQQLAVQALSIVNNS 442
++ ++ + + + ++ L+ Q + + L N +
Sbjct: 569 NVQSLQANLAELKNSSTKINKAISDTQAALAKGQENLKFQQKQLDQANQT 618
>gi|229011051|ref|ZP_04168245.1| Flagellin [Bacillus mycoides DSM 2048]
gi|228750223|gb|EEM00055.1| Flagellin [Bacillus mycoides DSM 2048]
Length = 41
Score = 39.7 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 28 QDRVSSGLRVSDAADNAAYWSIAQIMK 54
+R+++G +++ A+DN A +I M+
Sbjct: 1 MERLATGKKLNAASDNPANVTIVTRMR 27
>gi|85058018|ref|YP_453720.1| flagellar hook-associated protein 3 FlgL [Sodalis glossinidius str.
'morsitans']
gi|84778538|dbj|BAE73315.1| flagellar hook-associated protein 3 FlgL [Sodalis glossinidius str.
'morsitans']
Length = 313
Score = 39.7 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 1/135 (0%)
Query: 3 SILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA 62
++ T++ +Q + V R+S+ RV +D+ A A ++ L+
Sbjct: 2 NLSTHYMYQQQTQFIMSSASRFNDVAMRLSASSRVLRPSDDPAAAMDAVTYRNALAQLNY 61
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDS-KSIQSEITQLQSQLRD 121
S G + + + + +S I KI A + I E+ L+ L
Sbjct: 62 YSGTRGYARAVLTKEGDTLQTVTNTLSAINAKIMAIQKPAGGDLAPIIQELEGLRDDLLA 121
Query: 122 IARGSSFNGENWLRT 136
A +G
Sbjct: 122 SANVQDTSGNYIFAG 136
>gi|285018203|ref|YP_003375914.1| flagellar hook-associated protein 1 (hap1) [Xanthomonas albilineans
GPE PC73]
gi|283473421|emb|CBA15926.1| probable flagellar hook-associated protein 1 (hap1) [Xanthomonas
albilineans]
Length = 624
Score = 39.7 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 37/337 (10%), Positives = 90/337 (26%), Gaps = 1/337 (0%)
Query: 116 QSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETV 175
++L IA G + + + + D + ++ V
Sbjct: 288 TAELGRIATGLASSYNQQHKAGMDLYGQMGGNFFNLPPPTVDGNSANTGNAAFTVNVSDV 347
Query: 176 LLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAA 235
+ Y + + ++ +++ T+ A K
Sbjct: 348 SKLDGQNLLLSYNGSTWSASRADTGASVAMTGSGTSADPFVVNGVSLQVSGTAAAGDKFL 407
Query: 236 NATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKN 295
A ++ + P+ AA T + + + ++ + +
Sbjct: 408 LQPTANAINNLSVAITDPSRIAAATPIKATVSLSNQGTGIVSKVQAVDATNANLLTPSNI 467
Query: 296 SITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAY 355
+ YT T + + + P DS T +
Sbjct: 468 AFVDATHYTIDGTGPFAYTAGQTISANGWSLTLDGKPSSGDSFAVSPTGPGSSDNGNAQL 527
Query: 356 NEKLAMEEMVSFIDTQIK-CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
L + ++ + + + IGS + + D +++ + L +
Sbjct: 528 LSHLDDAKALNGGTITLNGAVSGLSTTIGSAARQAQYSSDAQNVIQSNAQDARDSLSGVN 587
Query: 415 MASESTRLSALQTQQQLAVQALSIVNNSTARILSLFR 451
+ E+ + LQ + A +S + ILS R
Sbjct: 588 LDEEAANMLQLQQAYEAASHIISTADTMFQSILSAIR 624
>gi|313585287|gb|ADR70851.1| flagellin [Borrelia garinii]
Length = 200
Score = 39.7 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVERGT---DSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ +++ V+ +K D SI+ EI QL ++ IA + +N +
Sbjct: 1 TTEGNLNEVEKVLVRMKELAVQSGNGTYSDADRGSIRIEIEQLTDEINRIADQAQYNQMH 60
Query: 133 WLRTDLGSSTASIAK 147
L S A+
Sbjct: 61 MLSNKSASQNVRTAE 75
>gi|209491043|gb|ACI49675.1| flagellin [Borrelia garinii]
Length = 194
Score = 39.3 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 12/159 (7%), Positives = 39/159 (24%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 36 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 95
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
T + + T + + + +
Sbjct: 96 TYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 155
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
++ I+ I+ + +G+ +R+ +D + +
Sbjct: 156 SLAKIENAIRMISDQRANLGAFQNRLESIKDSTEYAIEN 194
>gi|87247993|gb|ABD36050.1| flagellin [Borrelia lusitaniae]
gi|87247995|gb|ABD36051.1| flagellin [Borrelia lusitaniae]
Length = 188
Score = 39.3 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 11/158 (6%), Positives = 37/158 (23%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 31 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 90
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + +
Sbjct: 91 IYAANVANLFSGEGAQVAQAAPAQEGVQQEGAQQPAPATAPSQGGVNSPINVTTTVDANT 150
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+S I+ I+ + +G+ +R+ +D + +
Sbjct: 151 SLSKIENAIRMVSDQRANLGAFQNRLESIKDSTEYAIE 188
>gi|154174188|ref|YP_001408072.1| flagellin [Campylobacter curvus 525.92]
gi|112802876|gb|EAU00220.1| flagellin [Campylobacter curvus 525.92]
Length = 252
Score = 39.3 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 3/106 (2%)
Query: 43 NAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE-- 100
+ A +IA + S + L ++IA + +S + I +
Sbjct: 42 DGANLAIADSLLSQSNTLEQGIANANDAIGMLNIADSTLSNLSQSANRINELSVSLGSAA 101
Query: 101 -RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASI 145
IQ EI+ L + + ++FNG++ ++L T
Sbjct: 102 LNSDQRSMIQKEISSLSHSMSQSVQNATFNGKSVFGSELNFVTGEG 147
>gi|307263090|ref|ZP_07544712.1| Predicted phage tail protein [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|306871716|gb|EFN03438.1| Predicted phage tail protein [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 2021
Score = 39.3 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 36/372 (9%), Positives = 87/372 (23%), Gaps = 8/372 (2%)
Query: 43 NAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG 102
++A +++ + S + A + + ++ +S + K + +
Sbjct: 1165 DSAISAVSADLTSYKQTQATKEQATSQQINGLTT---RLANTESGISRV-EKAVSDNQSS 1220
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
T ++ Q ++Q A+ + + + S + S +
Sbjct: 1221 TATQLNQLSANLTKAQTDLNAKITQEQTARADADKANADRITSVTSRVASAESSISNIQS 1280
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
+ + + +D S+ +
Sbjct: 1281 TKASKTEVASLAQQSLQAVWQADAQAKVDAISVGGRNLLRFTQKLTDSKFWKFYKSSTQT 1340
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
+ + A DQ G P T S + A+
Sbjct: 1341 ETESPRSDDELLIKAKEDQWTGYRQEGTANPLIELEAGKTYTISFEAKGNSTATNLIRFF 1400
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMV 342
+ + P T ++ + + S
Sbjct: 1401 AREYYQGGSRNIAKYFTLPNVDKWERFTFTFTVDSLNEKHNNWIIYWETVTANSSFALRR 1460
Query: 343 TLNITRHANTDAYNEKLAMEEMVSFI----DTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+ TD + ++ I D+ + T A +GS + + K
Sbjct: 1461 MKLEIGNVATDWTPAPEDADSAINSISSKVDSVQQTLTTANQALGSRIDTVTASVNDAKS 1520
Query: 399 MRDAVEKGVGRL 410
V K V +
Sbjct: 1521 QVSQVSKAVSDV 1532
>gi|226320909|ref|ZP_03796460.1| flagellar hook-associated protein FlgL [Borrelia burgdorferi 29805]
gi|226233681|gb|EEH32411.1| flagellar hook-associated protein FlgL [Borrelia burgdorferi 29805]
Length = 234
Score = 39.3 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 30/70 (42%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
++ ID +K + +G+ +R+ + I +++ + + D D+ T L+
Sbjct: 149 SLAEIDESLKRLLISVADLGAKENRLDRSYERISKEAADMKEDMIQYTDLDVTKAITNLN 208
Query: 424 ALQTQQQLAV 433
Q+++
Sbjct: 209 MASLAYQVSI 218
>gi|38175040|dbj|BAD01151.1| putative flagellar hook-associated protein 3 [Pseudomonas syringae
pv. glycinea]
Length = 276
Score = 39.3 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 28/76 (36%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ I + I A+ A G+ Q L++ G V+AD+ +TRL
Sbjct: 191 SALGNIASSIDQASTARSAGGARQLAATAQGTTNDLLKGNNTVEQGTYVNADIVEATTRL 250
Query: 423 SALQTQQQLAVQALSI 438
+ +T + Q
Sbjct: 251 TLQKTMLDASQQVFVQ 266
>gi|313184661|gb|ADR49895.1| flagellin [Borrelia burgdorferi]
Length = 118
Score = 39.3 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 4/64 (6%), Positives = 18/64 (28%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPTPATAPTQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 112
Query: 394 DFIK 397
+ +
Sbjct: 113 NSTE 116
>gi|170050511|ref|XP_001861344.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872139|gb|EDS35522.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 323
Score = 39.3 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 26/273 (9%), Positives = 52/273 (19%), Gaps = 4/273 (1%)
Query: 130 GENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGL 189
T + T F T + PE + T
Sbjct: 48 PNFNWTTPEANWTTPDYNWTTPEFNWTTPEANWTTPEFNWTTPEANWTTPEFNWTTPEAN 107
Query: 190 LDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIP 249
P+ + + T TT A + + T P
Sbjct: 108 WTTPDYNWTTPEFNWTTPEANWTTPEFNWTTPEANWTTPEFNWTTPEANWTTPEFNWTTP 167
Query: 250 VPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVA 309
P TT + + + + Y W + T
Sbjct: 168 EANWTTPDYNWTTPEFNWTTPEANWTTPNYNWTTPEANWTTPDYYWTTPEFNWTTPEANW 227
Query: 310 KVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVS--- 366
N ++ + T E++ T E +
Sbjct: 228 TTPNFNWTTPEANWTTPDYNLTTPELNWTTPGANWTTPEFNWTTPEANWTTPEVQLDYTG 287
Query: 367 -FIDTQIKCATAAAGKIGSISSRIHLQEDFIKL 398
+D ++ + ++ +
Sbjct: 288 SELDNSGVQLDNTGSELDNSRVQLDYTGSKLDN 320
>gi|331011051|gb|EGH91107.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 331
Score = 39.3 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 28/76 (36%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ I + I A+ A G+ Q L++ G V+AD+ +TRL
Sbjct: 246 SALGNIASSIDQASTARSAGGARQLAATAQGTTNDLLKGNNTVEQGTYVNADIVEATTRL 305
Query: 423 SALQTQQQLAVQALSI 438
+ +T + Q
Sbjct: 306 TLQKTMLDASQQVFVQ 321
>gi|308050016|ref|YP_003913582.1| hypothetical protein Fbal_2305 [Ferrimonas balearica DSM 9799]
gi|307632206|gb|ADN76508.1| conserved hypothetical protein [Ferrimonas balearica DSM 9799]
Length = 339
Score = 39.3 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 34/88 (38%), Gaps = 9/88 (10%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV------DAD--MASESTRLS 423
+ A KI +++ Q + ++ AV + ++ D D MA + L+
Sbjct: 252 LDQLKQAQAKIRKTLNKVESQISELDSLQAAVSARLDKIRRHTGTGDVDSVMAELNRELA 311
Query: 424 ALQTQQQLAVQALSIVNNSTARILSLFR 451
Q+ L+ N S +++ L R
Sbjct: 312 RSPFSSQVG-ALLAQANLSRSQVTDLLR 338
>gi|297673811|ref|XP_002814945.1| PREDICTED: coiled-coil domain-containing protein 158-like [Pongo
abelii]
Length = 1116
Score = 39.3 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 35/404 (8%), Positives = 103/404 (25%), Gaps = 13/404 (3%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+L+ LE ++ + S + +D A +A M+ A DA+ ++
Sbjct: 700 QLKSAQSELEQTRNTLKS----MEGSDGHA-MKVAMGMQKQITAKRGQIDALQSKIQFLE 754
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVER-GTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
A SK + K+K++ + T+ + E+ L+SQ R + +
Sbjct: 755 EAMTNASKEKHFLKEEKSKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVTNMEVALD 814
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+ L + + + + + + +
Sbjct: 815 KASLQFAECQDIIQRQEQESVRLKLQHTLDIKELQGPGYISNSSLKPRLLQPASVTRSHS 874
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ + A+ L N +
Sbjct: 875 NVPSSQSTASFLSHHSTKANTLKEDPTRDLKQLLQELRSVINEEPAVSLSKTEEDGRTSL 934
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
+ S S + + +S +++ S + G
Sbjct: 935 GALEDRVRDCITESSLRSDMCHRSNNSLRDSTEGSKSSETLSREPVTLHAGDMEDPSGCF 994
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + +S + +L + + + + + D+
Sbjct: 995 TFTSAASPSVKNSASRSFNSSPKKSPVHSLLTSSVEGSIGSTSQYRSAKPIHSSDSVKAI 1054
Query: 375 ATAAAG-------KIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ ++ + + +R+ + ++ ++ + +
Sbjct: 1055 SNSSQSPPIEQQENMQKLQNRLESLQTLVEDLQLKNQAMSSMIR 1098
>gi|153947262|ref|YP_001399641.1| flagellar hook-associated protein FlgL [Yersinia pseudotuberculosis
IP 31758]
gi|152958757|gb|ABS46218.1| flagellar hook-associated protein 3 [Yersinia pseudotuberculosis IP
31758]
Length = 305
Score = 39.3 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 13/177 (7%), Positives = 57/177 (32%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + + ++ + + +L+ + ++ + R++ +++ + + + +
Sbjct: 3 ISTPTMSSAMNKFITQRHESLDKINKQMMTQQRITLPSEDPIASTRLLQINREQANIKQY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
+ I S+ + +S + IK+++ + +K I ++ L +
Sbjct: 63 TGNIDGLSNSLTHQVGHVSAINTQLVAIKDRLLSISNDVKSNKDISGVADEMNYMLEAVV 122
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ G+++ + + + + + +
Sbjct: 123 AELNAKNSEGRYLFAGTASNTKPITFDRNNNTYTFVGNSKNRQTGVGEGVKITENVH 179
>gi|308459870|ref|XP_003092247.1| CRE-PPGN-1 protein [Caenorhabditis remanei]
gi|308253975|gb|EFO97927.1| CRE-PPGN-1 protein [Caenorhabditis remanei]
Length = 931
Score = 39.3 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 31/85 (36%)
Query: 350 ANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGR 409
AN+ + + S + + +A ++ S S++ + + + + +
Sbjct: 768 ANSQLASANSKLASANSQLASAKSKLASANSQLASAKSQLASTKSQLASAKSQLASAKSK 827
Query: 410 LVDADMASESTRLSALQTQQQLAVQ 434
L A+ S + T+ QLA
Sbjct: 828 LASANSQLASAKSQLASTKSQLASA 852
Score = 37.8 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 31/97 (31%), Gaps = 9/97 (9%)
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
+ + S + + +A K+ S +S++ + + +L A+
Sbjct: 738 ASANSQLASANSKLASANSQLASAKSKLASANSQLASANSKLASANSQLASAKSKLASAN 797
Query: 415 MASESTRLSALQTQQQLAVQ---------ALSIVNNS 442
S + T+ QLA L+ N+
Sbjct: 798 SQLASAKSQLASTKSQLASAKSQLASAKSKLASANSQ 834
>gi|194365674|ref|YP_002028284.1| flagellar hook-associated protein FlgK [Stenotrophomonas
maltophilia R551-3]
gi|194348478|gb|ACF51601.1| flagellar hook-associated protein FlgK [Stenotrophomonas
maltophilia R551-3]
Length = 626
Score = 39.0 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 36/346 (10%), Positives = 91/346 (26%), Gaps = 7/346 (2%)
Query: 106 KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT 165
+ + +T Q++L +A G + + + R T
Sbjct: 279 EFRDTVLTPAQAELGKLAVGLAESFNQAHHQGVDLYGKLGGDFFNIGNPRVTANNANTGT 338
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+ + + ++ + + I+ K +
Sbjct: 339 ASLTATYGDLGKLDAQNVVLQFDGSNWKASRADTGANVPLTGTGTAADPLVINGVKMVVG 398
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
T A + G I + P+ AA G + + + + ++
Sbjct: 399 GTPAANDRFLLQPTAGVAGSMEIAITDPSRIAAAAAVKGAAATANTGTGKLSGVTVTDSN 458
Query: 286 DIWVRA----TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
+ +R ++ T G T + K +
Sbjct: 459 NANLRNPAAIVFTSATTYTIDGGPPQTYTPGQTISANGWSFVLDGAPKVGDTFNITPTPA 518
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ + + + A ++ + T +G+ + D ++ D
Sbjct: 519 GSSDNSNASKLAKVESAKAFNAGTVTLNGALGGLTTQ---VGAAARSAEYSLDAQLVIND 575
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
++ + ++ E+ + LQ Q A Q +S ++ IL
Sbjct: 576 KAQEARDEVSGVNLDEEAADMLRLQQAYQAASQLISTADSMFQTIL 621
>gi|224825170|ref|ZP_03698276.1| flagellar hook-associated protein FlgK [Lutiella nitroferrum 2002]
gi|224602841|gb|EEG09018.1| flagellar hook-associated protein FlgK [Lutiella nitroferrum 2002]
Length = 598
Score = 39.0 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 49/471 (10%), Positives = 123/471 (26%), Gaps = 24/471 (5%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGL--RVSDAADNAAYWS-IAQIMKSDNG 58
++I + +A++ +Q L L+ ++SG+ R+ + D + +
Sbjct: 126 SAIPSRQTAINNAQALATKFRTLDGQLQEMASGVSTRIKASVDTINGLASQIADLNQRIS 185
Query: 59 ALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQ 118
L+ + S+ D+ +++ +K + + + L +Q
Sbjct: 186 GLTVKTSGGTTLSAPNDLLDQRDQAILELNKQVKASVVPQSDGSYSVFIGNGQTLVLGNQ 245
Query: 119 LRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
+A L+ S++ S G + + + T L +
Sbjct: 246 ANQLATQPDPADPQQLQLVYQSTSGSNTVIPTSLIQGGALGGLFDFRDNTLTEARTRLGN 305
Query: 179 SSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANAT 238
+ D + AS T + A +
Sbjct: 306 LAIDFATAINYQQQLGLDLNGQPGQPLFTDLSAYASDPRGAASALQVTMTDPKGLATASN 365
Query: 239 FDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSIT 298
+ +T G G S S A + + ++ + ++T
Sbjct: 366 LKPGSPAVSPTGSGLTISGVYSTLPGNYGWSSASAAGAPDVTAHPSYNLTSLSIDSTTMT 425
Query: 299 SDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEK 358
+ T V+ + + I S +
Sbjct: 426 ATVVNGAGTTTYNVVPQPNVENGYKLVSGSPAVDAGIAFKLSGQLTTGLTLSVVPNAAPI 485
Query: 359 LAMEEMV---------------------SFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
A + S + + + +GS+++ + +
Sbjct: 486 GAGDNANLLEMTKLQTRPLVDDDRADTSSSLTSFASHYASMVSYVGSVTNEVAVTSTAQT 545
Query: 398 LMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
+ +K + ++ E+ L Q Q + + + I + +L
Sbjct: 546 NVLQEAQKARDAISGVNLDEEAANLIKYQQAYQASSKVIQIAQQLFSSLLQ 596
>gi|207109301|ref|ZP_03243463.1| flagellar hook-associated protein FlgL [Helicobacter pylori
HPKX_438_CA4C1]
Length = 141
Score = 39.0 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 11/98 (11%), Positives = 27/98 (27%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL 115
+ + M K K+ S + L
Sbjct: 77 DKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDL 114
>gi|258575607|ref|XP_002541985.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902251|gb|EEP76652.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1258
Score = 39.0 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 22/331 (6%), Positives = 59/331 (17%), Gaps = 11/331 (3%)
Query: 106 KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT 165
I + L + + + + + + + + +
Sbjct: 268 TPIVDKAPSLPEEADQDPVNVFDSFHKSRESVPTPTEIAPKTQRLPPAAEPRSASPALPS 327
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
V + + + S ++
Sbjct: 328 AKPKTSSPPVYGYPQSRSPAPVHSPHYAYSVPYTHPYAPTPVYPNGSFHDVHSGGAMAVS 387
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
+ D A K + +
Sbjct: 388 VAPHCSPAVRPSAMDGYHSRIASRGSFSRGHADYPYNGSYHQPKQRGSTPTQQRPAENGN 447
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
+ T Y + + E S++
Sbjct: 448 SESLHVEGDTIKLLQRIQNVIPDINRLVTSYRDTQNQLSAHVAQSRQIEEQHERSLMEKE 507
Query: 346 ITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR---IHLQEDFIKLMRDA 402
A + + + ++G + + + + +K D
Sbjct: 508 FYIDALQAQIQKTAKENAA--EVAKLRNRISELRMELGGLQEQHRDVEDSLEELKKANDE 565
Query: 403 VEKGVGRLVDADMASESTRLSALQTQQQLAV 433
+ AD+ E + L Q+Q A
Sbjct: 566 LTLAR-----ADLEQEISNLQRT-IQEQAAT 590
>gi|254524155|ref|ZP_05136210.1| flagellar hook-associated protein FlgK [Stenotrophomonas sp. SKA14]
gi|219721746|gb|EED40271.1| flagellar hook-associated protein FlgK [Stenotrophomonas sp. SKA14]
Length = 626
Score = 39.0 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 34/346 (9%), Positives = 89/346 (25%), Gaps = 7/346 (2%)
Query: 106 KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT 165
+ + +T Q++L +A G + + R T
Sbjct: 279 EFRDTVLTPAQAELGKLAVGLAETFNQTHHQGVDMYGQLGGDFFNIGNPRVTANNANTGT 338
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+ + + ++ + I+ K +
Sbjct: 339 ASLSATYGDLGKLDAQNVVLQFDGTQWKASRADTGANVPLTGTGTAADPLVINGVKLVVG 398
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
T A + G + + P+ AA G + + + + ++
Sbjct: 399 GTPAANDRFLLQPTAGVAGSMEVAITDPSRIAAAAAVKGAAATSNTGTGKLSGVTVSDST 458
Query: 286 DIWVRA----TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
+ +R ++ T G T + K +
Sbjct: 459 NANLRNPAAIVFTSATTYTIDGGPPQTYTPGQTISANGWSFVLDGAPKVGDTFNITPTPA 518
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ + + + A ++ + T +G+ + + ++ D
Sbjct: 519 GSSDNSNASRLAKVESAKAFNSGTVTLNGALGGLTTQ---VGAAARSAEYSLEAQLVIND 575
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
++ + ++ E+ + LQ Q A Q +S ++ IL
Sbjct: 576 KAQEARDEVSGVNLDEEAADMLRLQQAYQAASQLISTADSMFQTIL 621
>gi|154252986|ref|YP_001413810.1| hypothetical protein Plav_2544 [Parvibaculum lavamentivorans DS-1]
gi|154156936|gb|ABS64153.1| conserved hypothetical protein [Parvibaculum lavamentivorans DS-1]
Length = 497
Score = 39.0 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 53/488 (10%), Positives = 130/488 (26%), Gaps = 53/488 (10%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T +++ Q + ++ + +Q ++S+GL+ A ++ + +SA
Sbjct: 3 ISTLSQSLALRQSINNMRAQFDDLQRQLSTGLKTDSYAKLGTDRNVVLSLSHQLNQISAY 62
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKN--KITAGVERGTDSKSIQSEITQLQSQLRD 121
++ I ++++ +++ + S +K + + Q ++ +
Sbjct: 63 TNTISKTQMRIEVMSDALTRVNSISSEMKTGVLTSGFELVNGKQTTAQISAAMQFDEMVN 122
Query: 122 IARGSSFNGENWLRTD-------------LGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
+ + + D GS + K I + D G +
Sbjct: 123 LMNLQVEDRYLFGGVDTQTRPVALPDEIMNGSGAKAGLKQFIDERAQADMGADGRGRLTL 182
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI---STKKFKLA 225
+ TV L + L+ V + +
Sbjct: 183 GIAGATVTLAEDAAPSIFGFKLEGATSTLSNATVTGPAGAPAGVDVEFTGLPAAGQQITL 242
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
T A T + + +V A+ S
Sbjct: 243 DMRLPDGTTTKVTLKATMDNPPAAGEFTIGTDAATTAANFQAALDTAVQTEASVTLKAAS 302
Query: 286 DIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLN 345
+ + T T++ T+ K + ++
Sbjct: 303 AVEASNNFFDYQAGGSPQRVDGPPFASATGLRDATDADTVFWYKGDLSGTAGNNMVAQID 362
Query: 346 ITRHANTDAYNEKLAMEEMVSFID--------------------------------TQIK 373
R + A ++ A+ + + ++
Sbjct: 363 SGRQVSYGARADQAAIRDTLKMSALLSAVEYSDADDLSQRKSYAALSTRVGDKLSFKGVQ 422
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA- 432
+ +G ++ + +D L+ + +G + +AD +L+ LQTQ Q +
Sbjct: 423 SLESIVTGLGLTAATLSNTQDRHDLVMATSNELLGDIQNADDYEVGVKLTMLQTQLQASY 482
Query: 433 --VQALSI 438
LS
Sbjct: 483 QVTAMLSQ 490
>gi|217031520|ref|ZP_03437025.1| hypothetical protein HPB128_21g78 [Helicobacter pylori B128]
gi|216946720|gb|EEC25316.1| hypothetical protein HPB128_21g78 [Helicobacter pylori B128]
Length = 157
Score = 39.0 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 14/119 (11%), Positives = 38/119 (31%), Gaps = 3/119 (2%)
Query: 18 RDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIA 77
+ + +++SGL++ N+ + + + L D +
Sbjct: 17 NALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAYTSTLNT 76
Query: 78 KAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
+ + M K K+ T +I +++ +L+ + ++A S
Sbjct: 77 DKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLREHMMNVANTSIGGNFYL 135
>gi|118200082|emb|CAJ43738.1| flagellin [Borrelia burgdorferi]
gi|118200092|emb|CAJ43743.1| flagellin [Borrelia burgdorferi]
Length = 189
Score = 39.0 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 11/150 (7%), Positives = 36/150 (24%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + T+ G + + A+ S N + +
Sbjct: 40 SNKSASQNVKTAEELGMQPAKINTPASLSGAQTSWTLRVHVGANQDEAIAVNIYAANVAN 99
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ T + + + + ++ I+
Sbjct: 100 LFSGEGAQAAQTAPVQEGAQQEGAQQPTPATAPSQGGVNSPVNVTTTVDANTSLAKIENA 159
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
I+ + +G+ +R+ +D + +
Sbjct: 160 IRMVSDQRANLGAFQNRLESIKDSTEYAIE 189
>gi|317153404|ref|YP_004121452.1| flagellin domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316943655|gb|ADU62706.1| flagellin domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 281
Score = 39.0 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 59/174 (33%), Gaps = 5/174 (2%)
Query: 43 NAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERG 102
N +I+ +++D GA + +G +S + +A+ GM+ +S + I + G
Sbjct: 54 NPFEEAISGTLRADAGATRQAARNVGEAASMMGVARTGMATISSALSDM-ENIIDKINTG 112
Query: 103 T---DSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
S +QS+ L+ ++ G+ FNG L + TA I D +G
Sbjct: 113 ELDGSSSVVQSDYNALRDKVLGTISGTDFNGIAMLDST-KWGTAQIDSGGKVFIQSDKSG 171
Query: 160 KVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDA 213
I+ V + + V+ + +
Sbjct: 172 GFDISFHAVDNPASGVNWSDLSGASLAVEGTRATQLGYVQSLASEMDSIQSMYQ 225
>gi|42410859|gb|AAS14965.1| flagellin [Borrelia spielmanii]
Length = 190
Score = 39.0 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 11/150 (7%), Positives = 36/150 (24%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + T+ G + + A+ S N + +
Sbjct: 41 SNKSASQNVKTAEELGMQPAKINTPASLSGAQTSWTLRVHVGANQDEAIAVNIYAANVAN 100
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ T + + + + ++ I+
Sbjct: 101 LFSGEGAQAAQTAPVQEGAQQEGAQQPTPATAPSQGGVNSPVNVTTTVDANTSLAKIENA 160
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
I+ + +G+ +R+ +D + +
Sbjct: 161 IRMVSDQRANLGAFQNRLESIKDSTEYAIE 190
>gi|291613044|ref|YP_003523201.1| flagellar hook-associated protein FlgK [Sideroxydans lithotrophicus
ES-1]
gi|291583156|gb|ADE10814.1| flagellar hook-associated protein FlgK [Sideroxydans lithotrophicus
ES-1]
Length = 640
Score = 39.0 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 43/386 (11%), Positives = 95/386 (24%), Gaps = 16/386 (4%)
Query: 78 KAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTD 137
+ S I+ G G Q+ + + L IA G + +
Sbjct: 256 EVAYLNGNGTTSRIQQSSLQGGNLGGFISFRQNILDPAINALGRIAMGLADKFNQQQQQG 315
Query: 138 LGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK 197
+ A + + + D + + + N
Sbjct: 316 VDLKGALGVNMFTMATPSVTAATSNAGGAVITATVNSTSALTGNDYSVVFDGTNYNVYNT 375
Query: 198 VEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPA 257
+++ + A ++ L T GA + A+ +
Sbjct: 376 ATNSLVQSFTPAQLTAGQAVTGTGITLQLTGGAAATSDTFLVRPTVNGASNFS--LSFTD 433
Query: 258 APNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYY 317
+ + + V+ T S N N+ T
Sbjct: 434 PTKIAAASPIRSNAPVSNLGTGTIGAASVTGGLPLNANLQQPVTITFNNPPTTFNVTGTG 493
Query: 318 VDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATA 377
+ + T + N + S + ++ A
Sbjct: 494 TGNPVNVPYTAGAAITYNGWTTQISGAPSAGDTFTVSQNTSATTDGSNSLLMAALQTANT 553
Query: 378 AA--------------GKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLS 423
A G++G+ ++++ + + +V + ++ E+ L
Sbjct: 554 LANSTTSFQGAYGQLVGQVGTQTNQLTVTSKAQTSLLTSVTTAQQAVSGVNLDEEAANLL 613
Query: 424 ALQTQQQLAVQALSIVNNSTARILSL 449
Q Q A +A+ I N IL+L
Sbjct: 614 RYQQAYQAAGKAMQIANTMFDTILNL 639
>gi|298529920|ref|ZP_07017322.1| flagellar hook-associated protein FlgK [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509294|gb|EFI33198.1| flagellar hook-associated protein FlgK [Desulfonatronospira
thiodismutans ASO3-1]
Length = 701
Score = 39.0 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 27/279 (9%), Positives = 67/279 (24%), Gaps = 3/279 (1%)
Query: 174 TVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233
+ N + + + K
Sbjct: 421 SNGAGLEHMKYAEGTYQVNNLEAALGTPNAGLPHGEKLQNGNFTVHFYDEDGEVESMSPK 480
Query: 234 AANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATT 293
P + + + S + + D + + +
Sbjct: 481 FPTQDEMGNDPEDWTGNFDPDKHGLDHVMRAINELDNISAEPVNNRLTISADDDYEFSFS 540
Query: 294 KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD 353
+S G +T + + E + ++ + T N
Sbjct: 541 DDSTGLLAGLGINTFFQGHDASSLAVNEKVRDNIAHINAGSVNGAGEANVGDNTTAKNIA 600
Query: 354 AYNEKLAMEEMV---SFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
++ + T + + +G +GS +S D+ K + D +++
Sbjct: 601 ELQDRKVDITTSFEGTTSQTIQEYYNSLSGNVGSDTSMTKFNADYNKSLTDDLDRRQQEK 660
Query: 411 VDADMASESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
++ E + L Q Q A + +S + +L L
Sbjct: 661 SGVNLDEEMSNLIKYQHSYQAAARMISTADQMMQTLLGL 699
>gi|331265484|ref|YP_004325114.1| cell wall surface anchor family protein,beta-N-acetylhexosaminidase
[Streptococcus oralis Uo5]
gi|326682156|emb|CBY99772.1| cell wall surface anchor family protein,beta-N-acetylhexosaminidase
[Streptococcus oralis Uo5]
Length = 1343
Score = 39.0 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 31/351 (8%), Positives = 73/351 (20%), Gaps = 10/351 (2%)
Query: 54 KSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEIT 113
+S L + G + + ++ +K K +
Sbjct: 243 ESQMTDLINYAKN--KGIGLIPTVNSP-GHMDAILHAMKELGIQKPNFNYFGKESARTVD 299
Query: 114 QLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPE 173
+ +A + + + +I + D G +
Sbjct: 300 LDNKE--AVAFTKALIDKYAAYFAGKTDIFNIGLDEYANDATDAKGWSVLQAYK---WYP 354
Query: 174 TVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLK 233
D +K + +Y S T K S
Sbjct: 355 EDGFPDKGYDKFIAYANDLARIVKSHGLKPMAFNDGIYYNSDTSFGTFDKDIIVSMWTGG 414
Query: 234 AANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATT 293
+K + + A G + + N+ I +
Sbjct: 415 WGGYDVASSKLLVEKGHQILNTNDAWYYVLGRNADGQGWYNLDQGLNGIKNTPITSVPKS 474
Query: 294 KNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTD 353
+ G + A + Y + S + E + + TD
Sbjct: 475 DGATIPFIGGMVAAWADTPSARYSPSRLFKLMRSFANANAEYFAADYESAEQALKEVPTD 534
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVE 404
V + I+ + + + + I ++ +
Sbjct: 535 LNRYTAESVAAVKEAEKAIRSLDSNLSR--AQQNTIDQAIAKLQEAVSNLT 583
>gi|190574257|ref|YP_001972102.1| flagellar hook-associated protein FlgK [Stenotrophomonas
maltophilia K279a]
gi|190012179|emb|CAQ45802.1| putative flagellar hook-associated protein [Stenotrophomonas
maltophilia K279a]
Length = 626
Score = 39.0 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 34/346 (9%), Positives = 91/346 (26%), Gaps = 7/346 (2%)
Query: 106 KSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITT 165
+ + +T Q++L +A G + + + R T
Sbjct: 279 EFRDTVLTPAQAELGKLAVGLAESFNQVHHQGVDLYGQLGGDFFNIGNPRVTANNANTGT 338
Query: 166 IDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLA 225
+ + + ++ + + I+ K +
Sbjct: 339 ASLSATYGDLGKLDAQNVVLQFDGTNWKASRADTGANVPLTGTGTAADPLVINGVKLVVG 398
Query: 226 TTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNS 285
T A + G + + P+ AA G + + + + ++
Sbjct: 399 GTPAANDRFLLQPTAGVAGSMEVAITDPSRIAAAAAVKGAAATSNTGTGKLSGVTVSDST 458
Query: 286 DIWVRA----TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
+ +R ++ T G T + K +
Sbjct: 459 NANLRNPAAIVFTSATTYTIDGGPPQTYTPGQTISANGWSFVLDGAPKVGDTFNITPTPA 518
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ + + + A ++ + T +G+ + + ++ D
Sbjct: 519 GSSDNSNASRLSKVESAKAFNSGTVTLNGALGGLTTQ---VGAAARSAEYSLEAQLVIND 575
Query: 402 AVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
++ + ++ E+ + LQ Q A Q +S ++ IL
Sbjct: 576 KAQEARDEVSGVNLDEEAADMLRLQQAYQAASQLISTADSMFQTIL 621
>gi|114594123|ref|XP_001148738.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
gi|114594125|ref|XP_517211.2| PREDICTED: coiled-coil domain-containing protein 158 isoform 2 [Pan
troglodytes]
Length = 1112
Score = 39.0 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 36/401 (8%), Positives = 101/401 (25%), Gaps = 10/401 (2%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+L+ LE ++ + S + +D A +A M+ A DA+ ++
Sbjct: 699 QLKSAQSELEQTRNTLKS----MEGSDGHA-MKVAMGMQKQITAKRGQIDALQSKIQFLE 753
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVER-GTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
A +K + K+K++ + T+ + E+ L+SQ R + +
Sbjct: 754 EAMTNANKEKHFLKEEKSKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVTNMEVALD 813
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+ L + + + + T + + +
Sbjct: 814 KASLQFAECQDIIQRQEQESVRLKLQHTLDIKELQGPGYTSNSSLKPRLLQPASVTRSHS 873
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ + A+ L N +
Sbjct: 874 NVPSSQSTASFLSHHSTKANTLKEDPTRDLKQLLQELRSMINEEPAVSLSKTEEDGRTSL 933
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
+ S S + + +S +++ S + G
Sbjct: 934 GALEDRVRDCITESSLRSDMCHRSNNSLRDSTEGSKSSETLSREPVTLHAGDMEDPSGCF 993
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + +S + +L + + + + + D+
Sbjct: 994 TFTSAASPSVKNSASRSFNSSPKKSPVHSLLTSSVEGSIGSTSQYRSAKPIHSSDSVKDS 1053
Query: 375 ATAAAGKIGSI----SSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ G +R+ + ++ ++ + +
Sbjct: 1054 QSPPIETTGKTCRKLQNRLESLQTLVEDLQLKNQAMSSMIR 1094
>gi|74476793|gb|ABA08447.1| flagellin [Borrelia spielmanii]
gi|74476797|gb|ABA08449.1| flagellin [Borrelia spielmanii]
Length = 192
Score = 39.0 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 11/150 (7%), Positives = 36/150 (24%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + T+ G + + A+ S N + +
Sbjct: 43 SNKSASQNVKTAEELGMQPAKINTPASLSGAQTSWTLRVHVGANQDEAIAVNIYAANVAN 102
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ T + + + + ++ I+
Sbjct: 103 LFSGEGAQAAQTAPVQEGAQQEGAQQPTPATAPSQGGVNSPVNVTTTVDANTSLAKIENA 162
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
I+ + +G+ +R+ +D + +
Sbjct: 163 IRMVSDQRANLGAFQNRLESIKDSTEYAIE 192
>gi|313184551|gb|ADR49840.1| flagellin [Borrelia burgdorferi]
Length = 118
Score = 38.6 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 8/114 (7%), Positives = 26/114 (22%)
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
S N + + + T +
Sbjct: 3 ASWTLRVHVGANQDEAIAVNIYAPYVANLFSGEGAQAAQTAPVQEGAQQEGAQQPAPATA 62
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
+ + + ++ I+ I+ + +G+ +R+ +D +
Sbjct: 63 PSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIKDSTE 116
>gi|298356990|emb|CBM40876.1| flagellin [Ralstonia pickettii]
Length = 151
Score = 38.6 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 34/104 (32%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + S L+ + + + IDT +
Sbjct: 48 NKLFDGSVTSTTFQYGQNAATDVTSVSNANLSTFGTLSGTSVTSTANATAAQAAIDTDLT 107
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
AA +G+ S ++ + + A+ L+D D AS
Sbjct: 108 NLKAARANLGAQQSGLNSTINTLTSNNTALSAAKSSLIDTDYAS 151
>gi|298356982|emb|CBM40872.1| flagellin [Ralstonia pickettii]
Length = 151
Score = 38.6 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 34/104 (32%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + S L+ + + + IDT +
Sbjct: 48 NKLFDGSVTSTTFQYGQNAATDVTSVSNANLSTFGTLSGTSVTSTANATAAQAAIDTDLT 107
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
AA +G+ S ++ + + A+ L+D D AS
Sbjct: 108 NLKAARANLGAQQSGLNSTINTLTSNNTALSAAKSSLIDTDYAS 151
>gi|293414377|ref|ZP_06657026.1| predicted protein [Escherichia coli B185]
gi|291434435|gb|EFF07408.1| predicted protein [Escherichia coli B185]
Length = 115
Score = 38.6 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 5/84 (5%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+ + ++G+ + + + + + LVD D + +
Sbjct: 34 LKNSLNNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----I 89
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
QQ A+QA LSLF+
Sbjct: 90 MQQTALQASYKAFTDMQG-LSLFQ 112
>gi|227889017|ref|ZP_04006822.1| conserved hypothetical protein [Lactobacillus johnsonii ATCC 33200]
gi|227850246|gb|EEJ60332.1| conserved hypothetical protein [Lactobacillus johnsonii ATCC 33200]
Length = 935
Score = 38.6 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 36/474 (7%), Positives = 120/474 (25%), Gaps = 49/474 (10%)
Query: 15 QKLRDINYNLEVVQDRVSSGLR--------VSD------AADNAAYWSIAQIMKSDNGAL 60
Q + D N +L Q ++++ + V+ ADN + A + S
Sbjct: 149 QNVSDANADLSTAQSQLATAKQKQADAQNLVNSKEAAKKTADNNVASAEAAVKNSGLDEA 208
Query: 61 SAVSDAIGLG----------------SSKVDIAKA--GMSKAIDVMSTIKNKITAGVERG 102
+ ++ +A+ ++ + ++ +
Sbjct: 209 KQNVQNVQNALKEIKKTNANNESVLSKNQASLAENNQTIATVNNNLAMANKALVDAQNNV 268
Query: 103 TDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQ 162
+ ++ + L+D A G++ + S + + I Q
Sbjct: 269 NAKQKALADAQKALKDLQDQASGAAGFFKAIAYNKDNSESLREDAQTAYNIITGQPNAYQ 328
Query: 163 ITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKF 222
T+++ + + ++ + ++ + + + +
Sbjct: 329 NITVEWAKEAVKLGQENDSTSLSNIEKALGYYQHWMTYRDKYGLRHPSISLTAVAIAMLS 388
Query: 223 KLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRM 282
+ + + + A P +
Sbjct: 389 SDFQHYSDEFNHPSLLTSKYGPFYSDEEDISAGEVNPIDNWMSEKDDIDKYIEGHPDAAA 448
Query: 283 GNSDIWVRATTKNSITSDPGYTNSTVAKVGN--------THYYVDTESTTLDSRKDLPKE 334
+ + T + + V + + + +
Sbjct: 449 YSFESTHPLTQDEWEKDVDFWNDKPVYIGHYASMIKPDANYVGLAGNEYEIQPMMNNADS 508
Query: 335 IDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQED 394
+D I ++ + L + I+ A + + + ++
Sbjct: 509 MDEIIFNPINGIDFNSYQNLVQSYLKDVKQEDKINILKANVVTANQNLVVAQNEVKSAQN 568
Query: 395 FIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARILS 448
++ ++ + A++ + ST+++ + Q A ++ +LS
Sbjct: 569 NVQSLQANL---------AELNNGSTKINKAISDTQAAQARVAETVAQAQNVLS 613
>gi|47219336|emb|CAG10965.1| unnamed protein product [Tetraodon nigroviridis]
Length = 869
Score = 38.6 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 10/106 (9%), Positives = 40/106 (37%), Gaps = 7/106 (6%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+++S L+V + A + L + + ++VD + +S +++
Sbjct: 127 EQLSRELQVL----DGANIQSIMASEKQVNILMQL---LDEALAEVDTIEGKLSSYEEML 179
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
++K+++ + + + +L +++ + + +
Sbjct: 180 QSVKDQMDQISQSNHLIQISNTNNGKLLDEIQFLVNYMDLSKGHIR 225
>gi|110671373|gb|ABG81949.1| flagellin [Borrelia lusitaniae]
gi|110671377|gb|ABG81951.1| flagellin [Borrelia lusitaniae]
Length = 181
Score = 38.6 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 11/153 (7%), Positives = 35/153 (22%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 29 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 88
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + + + + +
Sbjct: 89 IYAANVANLFSGEGAQVAQAAPAQEGVQQEGAQQPAPATAPSQGGVNSPINVTTTVDANT 148
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+S I+ I+ + +G+ +R+ +D
Sbjct: 149 SLSKIENAIRMVSDQRANLGAFQNRLESIKDST 181
>gi|118200086|emb|CAJ43740.1| flagellin [Borrelia burgdorferi]
Length = 188
Score = 38.6 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 11/146 (7%), Positives = 35/146 (23%)
Query: 252 LPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKV 311
+ + T+ G + + A+ S N + +
Sbjct: 39 SNKSASQNVKTAEELGMQPAKINTPASLSGAQTSWTLRVHVGANQDEAIAVNIYAANVAN 98
Query: 312 GNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQ 371
+ T + + + + ++ I+
Sbjct: 99 LFSGEGAQAAQTAPVQEGAQQEGAQQPTPATAPSQGGVNSPVNVTTTVDANTSLAKIENA 158
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIK 397
I+ + +G+ +R+ +D +
Sbjct: 159 IRMVSDQRANLGAFQNRLESIKDSTE 184
>gi|313184663|gb|ADR49896.1| flagellin [Borrelia burgdorferi]
gi|313184665|gb|ADR49897.1| flagellin [Borrelia burgdorferi]
gi|313184667|gb|ADR49898.1| flagellin [Borrelia burgdorferi]
gi|313184669|gb|ADR49899.1| flagellin [Borrelia burgdorferi]
gi|313184671|gb|ADR49900.1| flagellin [Borrelia burgdorferi]
gi|313184673|gb|ADR49901.1| flagellin [Borrelia burgdorferi]
gi|313184675|gb|ADR49902.1| flagellin [Borrelia burgdorferi]
gi|313184677|gb|ADR49903.1| flagellin [Borrelia burgdorferi]
gi|313184679|gb|ADR49904.1| flagellin [Borrelia burgdorferi]
gi|313184681|gb|ADR49905.1| flagellin [Borrelia burgdorferi]
gi|313184683|gb|ADR49906.1| flagellin [Borrelia burgdorferi]
gi|313184685|gb|ADR49907.1| flagellin [Borrelia burgdorferi]
gi|313184687|gb|ADR49908.1| flagellin [Borrelia burgdorferi]
gi|313184689|gb|ADR49909.1| flagellin [Borrelia burgdorferi]
gi|313184691|gb|ADR49910.1| flagellin [Borrelia burgdorferi]
gi|313184693|gb|ADR49911.1| flagellin [Borrelia burgdorferi]
gi|313184695|gb|ADR49912.1| flagellin [Borrelia burgdorferi]
Length = 118
Score = 38.6 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 4/64 (6%), Positives = 18/64 (28%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPTPATAPTQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 112
Query: 394 DFIK 397
+ +
Sbjct: 113 NSTE 116
>gi|118200088|emb|CAJ43741.1| flagellin [Borrelia burgdorferi]
Length = 189
Score = 38.6 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 11/158 (6%), Positives = 38/158 (24%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 32 QYNQMHMLSNKSASQNVKTAEELGMQPAKINTPASLSGAQTSWTLRVHVGANQDEAIAVN 91
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 92 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPTPATAPSQGGVNSPVNVTTTVDANT 151
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
++ I+ I+ + +G+ +R+ +D + +
Sbjct: 152 SLAKIENAIRMVSDQRANLGAFQNRLESIKDSTEYAME 189
>gi|257484936|ref|ZP_05638977.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 240
Score = 38.6 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 28/76 (36%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ I + I A+ A G+ Q L++ G V+AD+ +TRL
Sbjct: 155 SALGNIASSIDQASTARSAGGARQLAATAQGTTNDLLKGNNTVEQGTYVNADIVEATTRL 214
Query: 423 SALQTQQQLAVQALSI 438
+ +T + Q
Sbjct: 215 TLQKTMLDASQQVFVQ 230
>gi|83955133|ref|ZP_00963789.1| flagellar hook-associated protein [Sulfitobacter sp. NAS-14.1]
gi|83840462|gb|EAP79635.1| flagellar hook-associated protein [Sulfitobacter sp. NAS-14.1]
Length = 359
Score = 38.6 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 36/319 (11%), Positives = 80/319 (25%), Gaps = 1/319 (0%)
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
+L+ ++ S + + TDLG AS+ K +
Sbjct: 27 ELQRVSEEVSTGKKADIYTDLGPRAASVMKLHGREANTQTFMTSNDVLASKLDAMLASVD 86
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS-TKKFKLATTSGAWLKAAN 236
+ T N + + S + +
Sbjct: 87 AARTQVQSVLESALVNATRDGNGAEVLQMQARAALESLVSTMNTSYNGENLFSGLESNKT 146
Query: 237 ATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNS 296
+ + A + T + + ++A + R
Sbjct: 147 SLTRWPETSADTGRSPQSVVEEIFGAGPTDPASAQAIADQLEAVFNSQDADASRNFQGTF 206
Query: 297 ITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
P S + + + R + D+ + L +T + D
Sbjct: 207 YQGSPERDASGAETKQISAWVNTGQEVVYGVRANDQSFRDAYKGLAMLAVTDVSQMDEAA 266
Query: 357 EKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
M E+V + + + +IG + + + + + D
Sbjct: 267 YSTWMSEVVDSLSASQEGMLDISARIGFNQEIVEKTQTQLTDLSLVQRTQISNYESVDPY 326
Query: 417 SESTRLSALQTQQQLAVQA 435
TR+++L+TQ Q + Q
Sbjct: 327 EAITRMNSLETQLQASYQV 345
>gi|294995158|ref|ZP_06800849.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis 210]
Length = 804
Score = 38.6 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 14/142 (9%), Positives = 35/142 (24%), Gaps = 1/142 (0%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQL-RDIA 123
+ + + + + ID+ + + D + ++ ++L IA
Sbjct: 347 QNLKDRVADLSTLTDQLQRMIDITQRTQELTRQLTDATHDMNAHTRQMRDNANELRDRIA 406
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F T I + + V T D + +T
Sbjct: 407 DFDDFWRPLRSFTYWERHCFDIPICWSMRSLLNSMDNVDKLTEDLANLTDDTERMDTTQR 466
Query: 184 TERYGLLDRNHKIKVEPQVLKD 205
L ++ + +
Sbjct: 467 QLLAQLDPTIATMQTVKDLAQT 488
>gi|134102678|ref|YP_001108339.1| M protein [Saccharopolyspora erythraea NRRL 2338]
gi|291004636|ref|ZP_06562609.1| M protein [Saccharopolyspora erythraea NRRL 2338]
gi|133915301|emb|CAM05414.1| M protein [Saccharopolyspora erythraea NRRL 2338]
Length = 589
Score = 38.2 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 10/97 (10%), Positives = 32/97 (32%), Gaps = 1/97 (1%)
Query: 22 YNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGM 81
++ +R+ + LR+ A +AA S A + + + + + ++ +
Sbjct: 27 AQVDEHLERIDADLRILTADRDAA-VSQANDLSKQLESARSEIENLRGQVERLSKPPTTL 85
Query: 82 SKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQ 118
+ + + + T+ +S+
Sbjct: 86 EGLSERLQRMLRLAQDEANDIRARAEKDAAETRARSE 122
>gi|118200084|emb|CAJ43739.1| flagellin [Borrelia burgdorferi]
Length = 185
Score = 38.2 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 11/154 (7%), Positives = 37/154 (24%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 31 QYNQMHMLSNKSASQNVKTAEELGMQPAKINTPASLSGAQTSWTLRVHVGANQDEAIAVN 90
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 91 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPTPATAPSQGGVNSPVNVTTTVDANT 150
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
++ I+ I+ + +G+ +R+ +D +
Sbjct: 151 SLAKIENAIRMVSDQRANLGAFQNRLESIKDSTE 184
>gi|118200090|emb|CAJ43742.1| flagellin [Borrelia burgdorferi]
Length = 189
Score = 38.2 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 11/154 (7%), Positives = 37/154 (24%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 32 QYNQMHMLSNKSASQNVKTAEELGMQPAKINTPASLSGAQTSWTLRVHVGANQDEAIAVN 91
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 92 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPTPATAPSQGGVNSPVNVTTTVDANT 151
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
++ I+ I+ + +G+ +R+ +D +
Sbjct: 152 SLAKIENAIRMVSDQRANLGAFQNRLESIKDSTE 185
>gi|291222915|ref|XP_002731461.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 1075
Score = 38.2 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 30/329 (9%), Positives = 80/329 (24%), Gaps = 6/329 (1%)
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
I+ N + + ++ + + ++ + I + S
Sbjct: 302 ISTQDEVNNMSKKIKEAKAAGVHVVSEDFLNTVKKGGAALMIQQSSIANWGTDPVTRISV 361
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
T + + + ++ K A+ +
Sbjct: 362 GSTAVDSAIKSGALKSGVSAREEKMYTKKVPDKLKMTVKGGAAVDPDSGLEDEAHVYSAK 421
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
I + + + + +
Sbjct: 422 GSVYNAILGLVDVTKGTNSYYKLQLLEHDNTKKWYVFRAWGRVGTTIGGNKVEKFHSLLN 481
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
+ T T+ K P E+D G ++ + + T +
Sbjct: 482 AMDHFCSLYGEKTGNDFGTKDFQKYPNKFYPLEMDYGQFNMSASQLNVSATQLNVSASQL 541
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
S +D A+A ++ + +S++ + ++ +L DA +++
Sbjct: 542 NVSASQLDVSASQLDASASQLDASASQLDASASQLDASASQLDASASQL-DA----SASQ 596
Query: 422 LSALQTQQQLAVQAL-SIVNNSTARILSL 449
L A +Q + L + + A L
Sbjct: 597 LDASASQLDASASQLDASASQLDASASQL 625
>gi|224372634|ref|YP_002607006.1| putative flagellin [Nautilia profundicola AmH]
gi|223589849|gb|ACM93585.1| putative flagellin [Nautilia profundicola AmH]
Length = 232
Score = 38.2 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 70/221 (31%), Gaps = 11/221 (4%)
Query: 11 MSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLG 70
++ +Q + IN ++ + D DN I + ++D +
Sbjct: 9 LNLNQSMNKINNDIHKLAD--------PSKTDNVVNAFIQDVYENDINTSLQEINNFNEA 60
Query: 71 SSKVDIAKAGMSKAIDVMSTIKNKITAGVE---RGTDSKSIQSEITQLQSQLRDIARGSS 127
+ IA + D +S IK A + +I S+I +L + D +
Sbjct: 61 VGFMQIADGALRSISDNVSEIKTLQVAANNATLNNDNLAAINSQINKLSQNINDTLSQTQ 120
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
+NG++ + S D+ + + + + S + ++
Sbjct: 121 YNGKSVFGEFNFNGINVNTSMPEFSTENIDDFEKSLNSALSSVGAFNNEAVSKVNNLAQF 180
Query: 188 GLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
+ N K + E + K + + ++ + +
Sbjct: 181 VINTSNAKSQNETDIAKTVTDMKNEELKLNASILAQAHKMN 221
>gi|332233271|ref|XP_003265827.1| PREDICTED: coiled-coil domain-containing protein 158 [Nomascus
leucogenys]
Length = 1113
Score = 38.2 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 36/401 (8%), Positives = 101/401 (25%), Gaps = 10/401 (2%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+L+ LE ++ + S + +D +A M+ A DA+ ++
Sbjct: 700 QLKSAQSELEQTRNALKS----MEGSD-VHAKKVAMGMQKQITAKRGQIDALQSKIQFLE 754
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVER-GTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
A +K + K+K++ + T+ + E+ L+SQ R + +
Sbjct: 755 EAMTNANKEKHFLKEEKSKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVTNMEVALD 814
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+ L + + + + T + + +
Sbjct: 815 KASLQFAECQDIIQRQEQESVHLKLQHSLDIKELQGPGYTSNSSLKPHLLQPASVTRSHS 874
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ + A+ L N +
Sbjct: 875 NVPSLQSTASFLSHHSTKANTLKEDPTRDLKQLLQELRSVINEEPAVSLSKTKEDGRTSL 934
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
+ S S + + +S +++ S + G
Sbjct: 935 GALEDRVRDCITESNLRSDMCHRSNNSLRDSTEGSKSSETLSREPVTLHAGDMEDLSGCF 994
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + +S L + +L + + + + + D+
Sbjct: 995 TFTSAASPSVKNSASRLFNSSPKKSPVHSLLTSSVEGSMGSTSQYRSAKPIHSSDSAKDS 1054
Query: 375 ATAAAGKIGSI----SSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ G +R+ + ++ ++ + +
Sbjct: 1055 QSPPIETTGKTCRKLQNRLESLQTLVEDLQLKNQAMSSMIR 1095
>gi|239502647|ref|ZP_04661957.1| Phage-related protein, tail component [Acinetobacter baumannii AB900]
Length = 3727
Score = 38.2 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 50/407 (12%), Positives = 131/407 (32%), Gaps = 8/407 (1%)
Query: 3 SILTNHSAMSA---SQKLRDINYNLEVVQDRVSS-GLRVSDAADNAAYWSIAQIMKSDNG 58
SI T + +S + L + + + ++SS G + ++ A + A K+D+
Sbjct: 1357 SINTINGTLSNKADATALNALTTRVSNAEGQISSQGSSIVSLQNDLASTNKAVSTKADSS 1416
Query: 59 ALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTI-KNKITAGVERGTDSKSIQSEITQLQS 117
AL+++ + +V ++ +S+I K T ++ ++E S
Sbjct: 1417 ALNSLDSKVSEIDGRVTSNANAVTSLQGSVSSIEKGLSTKADASALNNYYTKTEADSAAS 1476
Query: 118 QLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLL 177
D G + + + S A + + + + +++ + P T+
Sbjct: 1477 GAIDKFNSQLTIGGVNVVANSEAPRTSTAATNREYLLYERSAELKAFYDENLEKPITISF 1536
Query: 178 DSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS---TKKFKLATTSGAWLKA 234
+ S + N + I V+ + ++ +
Sbjct: 1537 EMSVPVAGPVQVYSSNGSAHQFVTSVNAIIVNQFAKYSVTVSPKAHTASTTVSTIEFYGT 1596
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
I A +P+ + + + A T ++ N D + T
Sbjct: 1597 YGTGRIPTIRKLQIEAGTKATAWSPSPRDTKAAIDANASAIQTTQTKVDNIDGRLTTATD 1656
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA 354
+ + + + + + + + + DS S+ + +
Sbjct: 1657 SITSLNSRMSTAEGNINSTNTAVGGLSTRMATAEGKITNQSDSIASLQNSVTSINGTLAN 1716
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRD 401
+ A+ + S ++T ++ +G+I S+S+ + L + +
Sbjct: 1717 KADSSAVNNLTSRVETAEGKISSQSGQITSLSNSLDLTNSNLNDVNV 1763
>gi|209491053|gb|ACI49680.1| flagellin [Borrelia burgdorferi]
Length = 197
Score = 38.2 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 11/159 (6%), Positives = 37/159 (23%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 39 QYNQMHMLSNKSASQNIRTAVELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 98
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 99 IYAANVANLFSGEGAQTAQAAPVQEGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 158
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDA 402
++ I+ I+ + +G +R+ +D + +
Sbjct: 159 SLAKIENAIRMISDQRANLGVFQNRLESIKDSTEYAIEN 197
>gi|260431758|ref|ZP_05785729.1| flagellar hook-associated protein FlgL family protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415586|gb|EEX08845.1| flagellar hook-associated protein FlgL family protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 335
Score = 38.2 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 23/62 (37%)
Query: 370 TQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQ 429
T ++G++ +RI + + E +V AD + +L +Q Q
Sbjct: 256 NAQDKTTTIRAQVGAVEARIEQAATRNSAAKTSFEYARNEIVAADPYETAAKLQTVQFQL 315
Query: 430 QL 431
+
Sbjct: 316 ES 317
>gi|167970784|ref|ZP_02553061.1| transmembrane transport protein mmpL1 [Mycobacterium tuberculosis
H37Ra]
Length = 939
Score = 38.2 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 14/142 (9%), Positives = 35/142 (24%), Gaps = 1/142 (0%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQL-RDIA 123
+ + + + + ID+ + + D + ++ ++L IA
Sbjct: 482 QNLKDRVADLSTLTDQLQRMIDITQRTQELTRQLTDATHDMNAHTRQMRDNANELRDRIA 541
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F T I + + V T D + +T
Sbjct: 542 DFDDFWRPLRSFTYWERHCFDIPICWSMRSLLNSMDNVDKLTEDLANLTDDTERMDTTQR 601
Query: 184 TERYGLLDRNHKIKVEPQVLKD 205
L ++ + +
Sbjct: 602 QLLAQLDPTIATMQTVKDLAQT 623
>gi|74476795|gb|ABA08448.1| flagellin [Borrelia spielmanii]
Length = 190
Score = 38.2 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 11/154 (7%), Positives = 37/154 (24%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 34 QYNQMHMLSNKSASQNVKTAEELGMQPAKINTPASLSGAQTSWTLRVHVGANQDEAIAVN 93
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 94 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPTPATAPSQGGVNSPVNVTTTVDANT 153
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
++ I+ I+ + +G+ +R+ +D +
Sbjct: 154 SLAKIENAIRMVSDQRANLGAFQNRLESIKDSTE 187
>gi|326430016|gb|EGD75586.1| NOTCH2 protein [Salpingoeca sp. ATCC 50818]
Length = 7004
Score = 38.2 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 24/78 (30%)
Query: 390 HLQEDFIKLMRDAVEKGVGRLVDA-------------DMA-------SESTRLSALQTQQ 429
+Q + A+E + RL DA D+A E+ L+A QT
Sbjct: 2714 EMQVTNLSANITALEAKLDRLADAIASNETSADAVAADLASARALLAEENANLTAAQTLA 2773
Query: 430 QLAVQALSIVNNSTARIL 447
Q +L + + +L
Sbjct: 2774 QQRQASL----QAASSVL 2787
>gi|329849967|ref|ZP_08264813.1| flagellin [Asticcacaulis biprosthecum C19]
gi|328841878|gb|EGF91448.1| flagellin [Asticcacaulis biprosthecum C19]
Length = 306
Score = 38.2 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 26/65 (40%)
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
G++ R+ + ++ ++ + +G +ADMA + L Q Q +
Sbjct: 230 DELVEQTSLNGTLQKRVETSQAALEGQASSLNELIGSRTEADMAKAYSNLQQAQVSVQAS 289
Query: 433 VQALS 437
Q L+
Sbjct: 290 AQVLA 294
>gi|258404735|ref|YP_003197477.1| flagellar hook-associated protein FlgK [Desulfohalobium retbaense
DSM 5692]
gi|257796962|gb|ACV67899.1| flagellar hook-associated protein FlgK [Desulfohalobium retbaense
DSM 5692]
Length = 560
Score = 38.2 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 39/407 (9%), Positives = 95/407 (23%), Gaps = 17/407 (4%)
Query: 48 SIAQIMKSDNGALSA-----VSDAI--GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE 100
SI + + ++A G + + + ++ + ++ A
Sbjct: 160 SIDSELNTQIAGINAKLGQVAKLNATVQQGLAVGKNPNTALDQRDVLLQELAQRLGATAV 219
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGK 160
G + A + D S + G
Sbjct: 220 EGDNGAVSVQLAGGQTLVQDTSAFTLQAANSGGVVQDFSLEIGSTTIDLSREDFGGGFGG 279
Query: 161 VQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK 220
+ + + +++ + + + + S + TK
Sbjct: 280 LLNVRDEVVTGVQDEMVNLRSSLIQAVNGQHTQGTDLDGDTGNNFFEPVTHFKSASFGTK 339
Query: 221 KFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYI 280
TT + K I A + + + + +
Sbjct: 340 TAPANTTGSDSDVKVEFSDGTDKSITIPDGTTFEGVAEAINDANVGVKATVAGTSGDYEL 399
Query: 281 RMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYS 340
R+ ++D TT + +S+ + + G + + G +
Sbjct: 400 RIASTDPDTTITTITNPSSNLQSPLLSWTQDGGGGDSGLQLAIENTGDIAAGESDAPGDN 459
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
+ N N + T I A +G + +
Sbjct: 460 RNAQKMAGLKNEKMVNGRY----------TAIDFYGKVAADVGVAGQQNDFNRSSFQNTV 509
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNNSTARIL 447
D +E + + +L Q Q + Q L+ + +L
Sbjct: 510 DQLEARRQEISGVSINESMIKLQRYQKAFQASAQYLTTADEMMQTLL 556
>gi|254361875|ref|ZP_04978009.1| bacteriophage tail protein [Mannheimia haemolytica PHL213]
gi|153093414|gb|EDN74405.1| bacteriophage tail protein [Mannheimia haemolytica PHL213]
Length = 1672
Score = 38.2 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 34/379 (8%), Positives = 87/379 (22%), Gaps = 12/379 (3%)
Query: 40 AADNAAY-WSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS-KAIDVMSTIKNKITA 97
AA++ S ++I S L+ + L + A++ ++ + + + +
Sbjct: 854 AAEDVTGKLSKSKIDTSLISQLTGADNTANLARRLAETAQSNINQEITNRQDAVTAEANN 913
Query: 98 GV-----ERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGS 152
E +K IQ+E T + + + + + ++ A +
Sbjct: 914 RTKAIQAESANLTKKIQAEATARGAAVTQLQNVDAQQAQLISAVTAKANNALSGLEEEKT 973
Query: 153 FIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYD 212
+ + + T ++ D
Sbjct: 974 ARANGDKAESQAREALTARMGAAESNIVTIQRTVANNAQSISEVSQNLNAKIDNINIGGR 1033
Query: 213 ASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPS 272
S S A NA K +T ++ ++
Sbjct: 1034 NLLRDSEFNAYNKWGSPQIEFAENANRRTIKVTSTGTNGPVGIVSSNRHSTSYFQQGETY 1093
Query: 273 VAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLP 332
+ +++ N++ S + +T L
Sbjct: 1094 TLSLFARGSKALDYLYLMRQDGNNVRLPVINVASETEFNYYKLTFKAPFTTQQGYF--LV 1151
Query: 333 KEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL- 391
S + + +D+ + +A +
Sbjct: 1152 GFFQSTPNQFVEFHSLKLEKGNVATDWTP--APEDVDSAVSAVSADLTSYKQTQAATDSA 1209
Query: 392 QEDFIKLMRDAVEKGVGRL 410
Q + + + K L
Sbjct: 1210 QAQQLNQLSVNLTKAESNL 1228
>gi|118475555|ref|YP_891710.1| flagellin [Campylobacter fetus subsp. fetus 82-40]
gi|261886010|ref|ZP_06010049.1| flagellin [Campylobacter fetus subsp. venerealis str. Azul-94]
gi|118414781|gb|ABK83201.1| flagellin [Campylobacter fetus subsp. fetus 82-40]
Length = 250
Score = 38.2 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 47/133 (35%), Gaps = 5/133 (3%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
L N + +S+ +S +++ IA ++S ++S + +
Sbjct: 14 YLDSAQKNASKALENISAQRALS--GTDSSNLLIADSLRSSASSISQGVNNANDAIGVLQ 71
Query: 76 IAKAGMSKAIDVMSTIKNKIT---AGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGEN 132
IA A + + + + ++ E L++ ++D +SFNG+N
Sbjct: 72 IADATLQNLGKGADRLNELSVRANSAINGPEQISALNKEANALKTSMQDSLNSASFNGKN 131
Query: 133 WLRTDLGSSTASI 145
L T +
Sbjct: 132 IFGNSLSFQTGNG 144
>gi|190149773|ref|YP_001968298.1| phage tail protein [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|189914904|gb|ACE61156.1| predicted phage tail protein [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
Length = 2020
Score = 38.2 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 36/360 (10%), Positives = 76/360 (21%), Gaps = 22/360 (6%)
Query: 55 SDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQ 114
L+ G S+V K + + T ++ Q
Sbjct: 1190 QQISGLTTRLANTESGISRV------------------EKAVSDNQSSTATQLNQLSANL 1231
Query: 115 LQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
++Q A+ + + + S + S + +
Sbjct: 1232 TKAQTDLNAKITQEQTARADADKANADRITSVTSRVASAESSISNIQSTKASKTEVASLA 1291
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ + +D S+ + + +
Sbjct: 1292 QQSLQAVWQADAQAKVDAISVGGRNLLRFTQKLTDSKFWKFYKSSTQTETESPRSDDELL 1351
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
A DQ G P T S + A+ +
Sbjct: 1352 IKAKEDQWTGYRQEGTANPLIELEAGKTYTISFEAKGNSTATNLIRFFAREYYQGGSRNI 1411
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA 354
+ P T ++ + + S + TD
Sbjct: 1412 AKYFTLPNVDKWERFTFTFTVDSLNEKHNNWIIYWETVTANSSFALRRMKLEIGNVATDW 1471
Query: 355 YNEKLAMEEMVSFI----DTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRL 410
+ ++ I D+ + T A +GS + + K V K V +
Sbjct: 1472 TPAPEDADSAINSISSKVDSVQQTLTTANQALGSRIDTVTASVNDAKSQVSQVSKAVSDV 1531
>gi|288960284|ref|YP_003450624.1| hypothetical protein AZL_a05490 [Azospirillum sp. B510]
gi|288912592|dbj|BAI74080.1| hypothetical protein AZL_a05490 [Azospirillum sp. B510]
Length = 682
Score = 38.2 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 36/92 (39%), Gaps = 11/92 (11%)
Query: 1 MTSILTNHSA----MSASQKLRDINYNLEVVQDRVSSGLRVSDAAD-NAAY--WSIAQIM 53
M+SI T S+ +S + L ++ + +++++G + + D NA +
Sbjct: 1 MSSI-TGVSSYSKYLSLVRNLSGGQNDINRLSEQLTTGKK---STDLNAYGPEVQKLLDL 56
Query: 54 KSDNGALSAVSDAIGLGSSKVDIAKAGMSKAI 85
+++ + I + +V ++
Sbjct: 57 RAEMANKNNYIQNINTAAPRVQATDKVLTSME 88
>gi|20530685|gb|AAM27194.1|AF497995_1 flagellin [Borrelia spielmanii]
Length = 181
Score = 38.2 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 11/153 (7%), Positives = 36/153 (23%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 29 QYNQMHMLSNKSASQNVKTAEELGMQPAKINTPASLSGAQTSWTLRVHVGANQDEAIAVN 88
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 89 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPTPATAPSQGGVNSPVNVTTTVDANT 148
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
++ I+ I+ + +G+ +R+ +D
Sbjct: 149 SLAKIENAIRMVSDQRANLGAFQNRLESIKDST 181
>gi|306779242|ref|ZP_07417579.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu002]
gi|306783030|ref|ZP_07421352.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu003]
gi|306787398|ref|ZP_07425720.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu004]
gi|306791951|ref|ZP_07430253.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu005]
gi|306796138|ref|ZP_07434440.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu006]
gi|306801995|ref|ZP_07438663.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu008]
gi|306806209|ref|ZP_07442877.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu007]
gi|306966405|ref|ZP_07479066.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu009]
gi|308327795|gb|EFP16646.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu002]
gi|308332149|gb|EFP21000.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu003]
gi|308335932|gb|EFP24783.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu004]
gi|308339537|gb|EFP28388.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu005]
gi|308343414|gb|EFP32265.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu006]
gi|308347223|gb|EFP36074.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu007]
gi|308351251|gb|EFP40102.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu008]
gi|308355805|gb|EFP44656.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu009]
Length = 958
Score = 38.2 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 14/142 (9%), Positives = 35/142 (24%), Gaps = 1/142 (0%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQL-RDIA 123
+ + + + + ID+ + + D + ++ ++L IA
Sbjct: 501 QNLKDRVADLSTLTDQLQRMIDITQRTQELTRQLTDATHDMNAHTRQMRDNANELRDRIA 560
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F T I + + V T D + +T
Sbjct: 561 DFDDFWRPLRSFTYWERHCFDIPICWSMRSLLNSMDNVDKLTEDLANLTDDTERMDTTQR 620
Query: 184 TERYGLLDRNHKIKVEPQVLKD 205
L ++ + +
Sbjct: 621 QLLAQLDPTIATMQTVKDLAQT 642
>gi|15607543|ref|NP_214916.1| transmembrane transport protein MmpL1 [Mycobacterium tuberculosis
H37Rv]
gi|15839785|ref|NP_334822.1| MmpL family membrane protein [Mycobacterium tuberculosis CDC1551]
gi|148660167|ref|YP_001281690.1| transmembrane transport protein MmpL1 [Mycobacterium tuberculosis
H37Ra]
gi|148821598|ref|YP_001286352.1| transmembrane transport protein mmpL1 [Mycobacterium tuberculosis
F11]
gi|215402152|ref|ZP_03414333.1| transmembrane transport protein mmpL1 [Mycobacterium tuberculosis
02_1987]
gi|215429222|ref|ZP_03427141.1| transmembrane transport protein mmpL1 [Mycobacterium tuberculosis
EAS054]
gi|215444488|ref|ZP_03431240.1| transmembrane transport protein mmpL1 [Mycobacterium tuberculosis
T85]
gi|218752029|ref|ZP_03530825.1| transmembrane transport protein mmpL1 [Mycobacterium tuberculosis
GM 1503]
gi|219556218|ref|ZP_03535294.1| transmembrane transport protein mmpL1 [Mycobacterium tuberculosis
T17]
gi|253797325|ref|YP_003030326.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis KZN
1435]
gi|254230756|ref|ZP_04924083.1| transmembrane transport protein mmpL1 [Mycobacterium tuberculosis
C]
gi|254363364|ref|ZP_04979410.1| transmembrane transport protein mmpL1 [Mycobacterium tuberculosis
str. Haarlem]
gi|254549344|ref|ZP_05139791.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260199398|ref|ZP_05766889.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis T46]
gi|260203550|ref|ZP_05771041.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis K85]
gi|289441781|ref|ZP_06431525.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis T46]
gi|289552651|ref|ZP_06441861.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis KZN
605]
gi|289568316|ref|ZP_06448543.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis T17]
gi|289572987|ref|ZP_06453214.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis K85]
gi|289744098|ref|ZP_06503476.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
02_1987]
gi|289752431|ref|ZP_06511809.1| transmembrane transporter MmpL1 [Mycobacterium tuberculosis EAS054]
gi|289756470|ref|ZP_06515848.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis T85]
gi|289760516|ref|ZP_06519894.1| transmembrane transport protein mmpL1 [Mycobacterium tuberculosis
GM 1503]
gi|297632884|ref|ZP_06950664.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis KZN
4207]
gi|297729859|ref|ZP_06958977.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis KZN
R506]
gi|306774496|ref|ZP_07412833.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu001]
gi|306970600|ref|ZP_07483261.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu010]
gi|307078326|ref|ZP_07487496.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu011]
gi|307082884|ref|ZP_07491997.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu012]
gi|313657188|ref|ZP_07814068.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis KZN
V2475]
gi|6225684|sp|P95211|MMPL1_MYCTU RecName: Full=Putative membrane protein mmpL1
gi|1817718|emb|CAB06593.1| PROBABLE CONSERVED TRANSMEMBRANE TRANSPORT PROTEIN MMPL1
[Mycobacterium tuberculosis H37Rv]
gi|13879914|gb|AAK44636.1| membrane protein, MmpL family [Mycobacterium tuberculosis CDC1551]
gi|124599815|gb|EAY58825.1| transmembrane transport protein mmpL1 [Mycobacterium tuberculosis
C]
gi|134148878|gb|EBA40923.1| transmembrane transport protein mmpL1 [Mycobacterium tuberculosis
str. Haarlem]
gi|148504319|gb|ABQ72128.1| transmembrane transport protein MmpL1 [Mycobacterium tuberculosis
H37Ra]
gi|148720125|gb|ABR04750.1| transmembrane transport protein mmpL1 [Mycobacterium tuberculosis
F11]
gi|253318828|gb|ACT23431.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis KZN
1435]
gi|289414700|gb|EFD11940.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis T46]
gi|289437283|gb|EFD19776.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis KZN
605]
gi|289537418|gb|EFD41996.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis K85]
gi|289542069|gb|EFD45718.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis T17]
gi|289684626|gb|EFD52114.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
02_1987]
gi|289693018|gb|EFD60447.1| transmembrane transporter MmpL1 [Mycobacterium tuberculosis EAS054]
gi|289708022|gb|EFD72038.1| transmembrane transport protein mmpL1 [Mycobacterium tuberculosis
GM 1503]
gi|289712034|gb|EFD76046.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis T85]
gi|308216848|gb|EFO76247.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu001]
gi|308359724|gb|EFP48575.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu010]
gi|308363666|gb|EFP52517.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu011]
gi|308367317|gb|EFP56168.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
SUMu012]
gi|323721209|gb|EGB30270.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis
CDC1551A]
gi|326902228|gb|EGE49161.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis W-148]
gi|328457112|gb|AEB02535.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis KZN
4207]
Length = 958
Score = 38.2 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 14/142 (9%), Positives = 35/142 (24%), Gaps = 1/142 (0%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQL-RDIA 123
+ + + + + ID+ + + D + ++ ++L IA
Sbjct: 501 QNLKDRVADLSTLTDQLQRMIDITQRTQELTRQLTDATHDMNAHTRQMRDNANELRDRIA 560
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F T I + + V T D + +T
Sbjct: 561 DFDDFWRPLRSFTYWERHCFDIPICWSMRSLLNSMDNVDKLTEDLANLTDDTERMDTTQR 620
Query: 184 TERYGLLDRNHKIKVEPQVLKD 205
L ++ + +
Sbjct: 621 QLLAQLDPTIATMQTVKDLAQT 642
>gi|300024586|ref|YP_003757197.1| flagellar hook-associated 3 family protein [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526407|gb|ADJ24876.1| flagellar hook-associated 3 family protein [Hyphomicrobium
denitrificans ATCC 51888]
Length = 351
Score = 38.2 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 35/335 (10%), Positives = 88/335 (26%), Gaps = 1/335 (0%)
Query: 102 GTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV 161
S + ++ ++ + I + ++ + +
Sbjct: 3 TPTFISTSALSSETKASIARIQHRLVDVQKELATGRHADVGLTLGAQTGVAVSLRQDISQ 62
Query: 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKK 221
+ D T + S Q + ++ +
Sbjct: 63 IQSIKDTNSLVLTRMQASQAALNTLATTSQSFLNALTPAQSTSTMSGTIVQQANAAMQSI 122
Query: 222 FKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR 281
+S + K + PAA A + + + I
Sbjct: 123 QDQLNSSLDGQYLFSGINSDVKPLDDYFANPPAASAQAVNAAFVAKFGMSPSDPGVSAIS 182
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD-TESTTLDSRKDLPKEIDSGYS 340
+ +++ + + N + A + + + TE+ + +
Sbjct: 183 ASDMQDFLQNEFADLFSDPNWSANWSDASDKSVNSRISRTETANTSVTANDQTFRQLTQA 242
Query: 341 MVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMR 400
+ N ++ + + +++ + I T +G R+ D I
Sbjct: 243 FAMVAGLGFQNLNSSTQNVVLQQATQLVSNGIGGLTRVQAFLGVTQQRVSDANDQIDTQI 302
Query: 401 DAVEKGVGRLVDADMASESTRLSALQTQQQLAVQA 435
D +EK + L D A +T++S L T + A
Sbjct: 303 DFLEKSISNLESVDPAEVTTQISDLSTALEAAYSV 337
>gi|215409912|ref|ZP_03418720.1| transmembrane transport protein mmpL1 [Mycobacterium tuberculosis
94_M4241A]
gi|298523876|ref|ZP_07011285.1| transmembrane transport protein mmpL1 [Mycobacterium tuberculosis
94_M4241A]
gi|298493670|gb|EFI28964.1| transmembrane transport protein mmpL1 [Mycobacterium tuberculosis
94_M4241A]
Length = 956
Score = 37.8 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 14/142 (9%), Positives = 35/142 (24%), Gaps = 1/142 (0%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQL-RDIA 123
+ + + + + ID+ + + D + ++ ++L IA
Sbjct: 501 QNLKDRVADLSTLTDQLQRMIDITQRTQELTRQLTDATHDMNAHTRQMRDNANELRDRIA 560
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F T I + + V T D + +T
Sbjct: 561 DFDDFWRPLRSFTYWERHCFDIPICWSMRSLLNSMDNVDKLTEDLANLTDDTERMDTTQR 620
Query: 184 TERYGLLDRNHKIKVEPQVLKD 205
L ++ + +
Sbjct: 621 QLLAQLDPTIATMQTVKDLAQT 642
>gi|294499156|ref|YP_003562856.1| MmpL family transporter [Bacillus megaterium QM B1551]
gi|294349093|gb|ADE69422.1| transporter, MmpL family [Bacillus megaterium QM B1551]
Length = 889
Score = 37.8 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 40/109 (36%), Gaps = 16/109 (14%)
Query: 13 ASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSS 72
A+ L IN L++V ++S+ V A +I++ + + L ++ +
Sbjct: 517 AADGLAQINQQLQLVSTQLSTTGNVQQAV--PQLVAISKQLTAIQTGLQQANENLSAQQG 574
Query: 73 KVDI--------------AKAGMSKAIDVMSTIKNKITAGVERGTDSKS 107
+V A G++K D ++ + + + T +
Sbjct: 575 QVGTLSDSINQLAKGVKSANDGLTKISDGLTKATDMLDNMSDSSTVRDT 623
>gi|218129073|ref|ZP_03457877.1| hypothetical protein BACEGG_00647 [Bacteroides eggerthii DSM 20697]
gi|317474857|ref|ZP_07934127.1| TonB-dependent Receptor Plug domain-containing protein [Bacteroides
eggerthii 1_2_48FAA]
gi|217988708|gb|EEC55027.1| hypothetical protein BACEGG_00647 [Bacteroides eggerthii DSM 20697]
gi|316908995|gb|EFV30679.1| TonB-dependent Receptor Plug domain-containing protein [Bacteroides
eggerthii 1_2_48FAA]
Length = 1161
Score = 37.8 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 32/375 (8%), Positives = 85/375 (22%), Gaps = 10/375 (2%)
Query: 25 EVVQDRVSSGLRVSDA----ADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG 80
+++S ++ A + A ++ + +S+ LS + + +
Sbjct: 589 STKSEQMS--FAINYARVFGKHDVAATAVVERAESEGDDLSQLYRGMSMSYGGTSATAGT 646
Query: 81 MSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGS 140
+S D T + +G S + + L + + F EN+
Sbjct: 647 LSS--DAQGTYYRRYESGALSYIGRASYKYDNRYLAQFVFRSDASTKFAPENYWGFFPTG 704
Query: 141 STASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEP 200
S +A + + Y + ++ + Y +
Sbjct: 705 SFGWVASEEKFFKNLKLDEIFDFFKLRYSIGKTGKDNVAAWQWLQIYKIEPTGGMGFGSL 764
Query: 201 QVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPN 260
+ + + G + N + + +
Sbjct: 765 GGSFASGAIINGTANRDIKWDTTIKQNFGIDMNMLNNRLSVSADFYYDKTKDLIMMISSD 824
Query: 261 TTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDT 320
G+K PS+ + + +I G + +
Sbjct: 825 EEPIVIGAKLPSINYGKKNAWGLEFSVNWKDQINQAILPKWGPIKYQIGMDYGISWNSTV 884
Query: 321 ESTTLDSRKDL--PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAA 378
+ + + + + ID T
Sbjct: 885 LGDEPTFDYPAEIANQKNWTGYHGMGGTYGFKTWKHTSSGDGILRNQADIDKYWDYLTKL 944
Query: 379 AGKIGSISSRIHLQE 393
A G+ + + +
Sbjct: 945 AEAAGTSPNFLGITS 959
>gi|112420968|ref|NP_001036249.1| coiled-coil domain-containing protein 158 [Homo sapiens]
gi|172045891|sp|Q5M9N0|CD158_HUMAN RecName: Full=Coiled-coil domain-containing protein 158
gi|119626193|gb|EAX05788.1| hypothetical protein FLJ25770, isoform CRA_a [Homo sapiens]
gi|162317738|gb|AAI56682.1| Hypothetical protein FLJ25770 [synthetic construct]
Length = 1113
Score = 37.8 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 36/401 (8%), Positives = 101/401 (25%), Gaps = 10/401 (2%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+L+ LE ++ + S + +D A +A M+ A DA+ ++
Sbjct: 700 QLKSAQSELEQTRNTLKS----MEGSDGHA-MKVAMGMQKQITAKRGQIDALQSKIQFLE 754
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVER-GTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
A +K + K+K++ + T+ + E+ L+SQ R + +
Sbjct: 755 EAMTNANKEKHFLKEEKSKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVTNMEVALD 814
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+ L + + + + T + + +
Sbjct: 815 KASLQFAECQDIIQRQEQESVRLKLQHTLDIKELQGPGYTSNSSLKPRLLQPASVTRSHS 874
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ + A+ L N +
Sbjct: 875 NVPSSQSTASFLSHHSTKANTLKEDPTRDLKQLLQELRSVINEEPAVSLSKTEEDGRTSL 934
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
+ S S + + +S +++ S + G
Sbjct: 935 GALEDRVRDCITESSLRSDMCHRSNNSLRDSTEGSKSSETLSREPVTLHAGDREDPSGCF 994
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + +S + +L + + + + + D+
Sbjct: 995 TFTSAASPSVKNSASRSFNSSPKKSPVHSLLTSSVEGSIGSTSQYRSAKPIHSSDSVKDS 1054
Query: 375 ATAAAGKIGSI----SSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ G +R+ + ++ ++ + +
Sbjct: 1055 QSPPIETTGKTCRKLQNRLESLQTLVEDLQLKNQAMSSMIR 1095
>gi|260661089|ref|ZP_05862003.1| predicted protein [Lactobacillus jensenii 115-3-CHN]
gi|260548026|gb|EEX24002.1| predicted protein [Lactobacillus jensenii 115-3-CHN]
Length = 2963
Score = 37.8 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 31/383 (8%), Positives = 98/383 (25%), Gaps = 2/383 (0%)
Query: 32 SSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTI 91
S+G V +AD+A ++ + + AL+ + + + +G++ +
Sbjct: 1600 STGESVGASADSAHVATLKKNLDDAASALNGTTK-LSEAKTNAATDLSGLTNLNNAQMQT 1658
Query: 92 KNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
K A + D + + + + +A ++ + ++ L + A K
Sbjct: 1659 AKKAVANAKTVADVTAAVNAAKNTNTNMGTLAADENYTKADQIKASLKYTNADEDKQKAY 1718
Query: 152 SFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ D + T + + + +
Sbjct: 1719 TDALDKVKTLLDKENGSSTGVVTTDAQAVQEAQTELDNAAKALNGQ-TKFDADKQKALDD 1777
Query: 212 DASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
+ + + AT A + + + + +
Sbjct: 1778 FDANYPNLNNAQKATAQKRISDATSPAELTTAQSTNSDLNDKMGQLKTVAATVSDTKATD 1837
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
+ + ++ + + + T D ++ A + + +
Sbjct: 1838 NYNYADPALKSVYDTTSDKVSATVAPTGDDLNSDQVTALINQEATDKAALNGEERLKAKA 1897
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ + K ++ ++ ++ + A + I
Sbjct: 1898 ALQTAHDTGLAGKTTDPKYYNATQTPKANYDKALTDAESTLASENATLADYQAAKKAIDD 1957
Query: 392 QEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ R+ DAD
Sbjct: 1958 AYGKLDGQATNKQELQSRVSDAD 1980
>gi|256830022|ref|YP_003158750.1| flagellin domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256579198|gb|ACU90334.1| flagellin domain-containing protein [Desulfomicrobium baculatum DSM
4028]
Length = 280
Score = 37.8 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 1/101 (0%)
Query: 34 GLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKN 93
G + N +I ++SD+ A+ + SS IA + + V+ +++
Sbjct: 44 GQQPVKPLTNPFDEAITGRLRSDSAAIRRAGKNVLEASSMAGIAASAVGTIKGVLEEMQS 103
Query: 94 KITAGVERG-TDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
+ T S + ++ L+ + I G+ NG
Sbjct: 104 LAQQIKDGTLTYSADVANQYNALRDSITPIIEGTYHNGIAV 144
>gi|330892998|gb|EGH25659.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
mori str. 301020]
Length = 234
Score = 37.8 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 28/76 (36%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ I + I A+ A G+ Q L++ G V+AD+ +TRL
Sbjct: 153 SALGNIASSIDQASTARSAGGARQLAATAQGTTNDLLKGNNTVEQGTYVNADIVEATTRL 212
Query: 423 SALQTQQQLAVQALSI 438
+ +T + Q
Sbjct: 213 TLQKTMLDASQQVFVQ 228
>gi|110671375|gb|ABG81950.1| flagellin [Borrelia lusitaniae]
Length = 181
Score = 37.8 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 12/153 (7%), Positives = 36/153 (23%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 29 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 88
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 89 IYAANVANLFSGEGAQVAQTAPAQEGVQQEGAQQPAPATAPSQGGVNSPINVTTTVDANT 148
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
+S I+ I+ + +G+ +R+ +D
Sbjct: 149 SLSKIENAIRMVSDQRANLGAFQNRLESIKDST 181
>gi|126632642|emb|CAM56387.1| SEC3-like 1 (S. cerevisiae) [Danio rerio]
Length = 892
Score = 37.8 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 10/118 (8%), Positives = 41/118 (34%), Gaps = 7/118 (5%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+++S L+V + A + L + + ++VD + + +++
Sbjct: 190 EKLSRELQVL----DGANIQSIMASEKQVNTLMQL---LDQALAEVDTIEGKLLSYEEML 242
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++K ++ + + + +L +++ + + + G ++
Sbjct: 243 QSVKEQMDQISQSNRLIQISNTNNGKLLDEIQFLVNYMDLSKGHIKALQEGDLSSPKG 300
>gi|41054577|ref|NP_955891.1| exocyst complex component 1 [Danio rerio]
gi|32451686|gb|AAH54625.1| Exocyst complex component 1 [Danio rerio]
Length = 892
Score = 37.8 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 10/118 (8%), Positives = 41/118 (34%), Gaps = 7/118 (5%)
Query: 29 DRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVM 88
+++S L+V + A + L + + ++VD + + +++
Sbjct: 190 EKLSRELQVL----DGANIQSIMASEKQVNTLMQL---LDQALAEVDTIEGKLLSYEEML 242
Query: 89 STIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
++K ++ + + + +L +++ + + + G ++
Sbjct: 243 QSVKEQMDQISQSNRLIQISNTNNGKLLDEIQFLVNYMDLSKGHIKALQEGDLSSPKG 300
>gi|256850878|ref|ZP_05556267.1| hypothetical protein HMPREF0525_00062 [Lactobacillus jensenii
27-2-CHN]
gi|282932664|ref|ZP_06338077.1| putative extracellular matrix-binding protein ebh [Lactobacillus
jensenii 208-1]
gi|256615940|gb|EEU21128.1| hypothetical protein HMPREF0525_00062 [Lactobacillus jensenii
27-2-CHN]
gi|281303174|gb|EFA95363.1| putative extracellular matrix-binding protein ebh [Lactobacillus
jensenii 208-1]
Length = 2941
Score = 37.8 bits (85), Expect = 3.7, Method: Composition-based stats.
Identities = 31/383 (8%), Positives = 98/383 (25%), Gaps = 2/383 (0%)
Query: 32 SSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTI 91
S+G V +AD+A ++ + + AL+ + + + +G++ +
Sbjct: 1578 STGESVGASADSAHVATLKKNLDDAASALNGTTK-LSEAKTNAATDLSGLTNLNNAQMQT 1636
Query: 92 KNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIG 151
K A + D + + + + +A ++ + ++ L + A K
Sbjct: 1637 AKKAVANAKTVADVTAAVNAAKNTNTNMGTLAADENYTKADQIKASLKYTNADEDKQKAY 1696
Query: 152 SFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVY 211
+ D + T + + + +
Sbjct: 1697 TDALDKVKTLLDKENGSSTGVVTTDAQAVQEAQTELDNAAKALNGQ-TKFDADKQKALDD 1755
Query: 212 DASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSP 271
+ + + AT A + + + + +
Sbjct: 1756 FDANYPNLNNAQKATAQKRISDATSPAELTTAQSTNSDLNDKMGQLKTVAATVSDTKATD 1815
Query: 272 SVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDL 331
+ + ++ + + + T D ++ A + + +
Sbjct: 1816 NYNYADPALKSVYDTTSDKVSATVAPTGDDLNSDQVTALINQEATDKAALNGEERLKAKA 1875
Query: 332 PKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ + K ++ ++ ++ + A + I
Sbjct: 1876 ALQTAHDTGLAGKTTDPKYYNATQTPKANYDKALTDAESTLASENATLADYQAAKKAIDD 1935
Query: 392 QEDFIKLMRDAVEKGVGRLVDAD 414
+ ++ R+ DAD
Sbjct: 1936 AYGKLDGQATNKQELQSRVSDAD 1958
>gi|149374975|ref|ZP_01892748.1| chromosome segregation SMC protein [Marinobacter algicola DG893]
gi|149360864|gb|EDM49315.1| chromosome segregation SMC protein [Marinobacter algicola DG893]
Length = 1164
Score = 37.8 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 34/397 (8%), Positives = 93/397 (23%), Gaps = 19/397 (4%)
Query: 33 SGLRVSDAADNAAYWSIAQ---IMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMS 89
SG ++ A D ++++ + + + L S + + + +
Sbjct: 366 SGEKLQSAED-----AMSEWQHNWEDFSSRSADARRQAELAQSSIRSQENAIEQLRTRQQ 420
Query: 90 TIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSV 149
++ + + G ++ ++ + Q L +S +
Sbjct: 421 RLREE--QDLLEGQVDRAELDDLLEQQETLELQREEASERINIVQDELQEARHHQRDAEQ 478
Query: 150 IGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVS 209
+ R ++ + + + + ++ Q+ D
Sbjct: 479 AATEARQQVQSLRASLESQQALLDEQMGSQDDALQAWLNEHSLSDCPRMATQLRIDDGWE 538
Query: 210 VYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSK 269
+ G N + + + + SG G
Sbjct: 539 FAVEQVIGRFSQGLSVPGLGGVHSNMNDAPRGLALVNSDSSANRPSEGLASKVSGAGGMA 598
Query: 270 SPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRK 329
S + S+ + G S + +
Sbjct: 599 SVLALVDTAESMEDALERQKGLAPGRSVITPEGAWLSADWILMPDSDAAQIGVIERQKKV 658
Query: 330 DLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRI 389
T + + + A D A ++ + +
Sbjct: 659 TALAGELEQAEASLEVATDNLDRLLEQSERAEAAR----DDAQGQLANADREL----ATL 710
Query: 390 HLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+ +K + ++ + R+ D D+A S L Q
Sbjct: 711 SSKISGLKARAEQIDARLQRIRD-DLADVSMNLEEQQ 746
>gi|296534170|ref|ZP_06896662.1| possible flagellar hook-associated protein [Roseomonas cervicalis
ATCC 49957]
gi|296265506|gb|EFH11639.1| possible flagellar hook-associated protein [Roseomonas cervicalis
ATCC 49957]
Length = 354
Score = 37.8 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 33/76 (43%)
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTR 421
++ V + A G +G+ SR+ K + D VE +G L D+A R
Sbjct: 268 QKTVGLLRDAGNGANDEIGALGTAQSRLSAAASQHKAVYDQVETQLGDLTTIDIAEAQVR 327
Query: 422 LSALQTQQQLAVQALS 437
L + Q Q + QAL+
Sbjct: 328 LQQVNLQLQGSYQALA 343
>gi|168214648|ref|ZP_02640273.1| KID repeat family protein [Clostridium perfringens CPE str. F4969]
gi|170713895|gb|EDT26077.1| KID repeat family protein [Clostridium perfringens CPE str. F4969]
Length = 2408
Score = 37.8 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 35/406 (8%), Positives = 88/406 (21%), Gaps = 14/406 (3%)
Query: 10 AMSASQKLRDINYNLEV-VQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIG 68
A+ A++ L NL D V++ + A A + +I + + + +
Sbjct: 1026 AIKAAENLALEKSNLAKKYADEVATAKA-NLAKTEAIANADGKISAEEKKRIQQAQENLN 1084
Query: 69 LGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQL-------QSQLRD 121
SK A AI+ + + +S + L +++
Sbjct: 1085 TAISK---ADKAKQDAINEANRVAELKKQEAINSANSHADNKANEALNNAKAFVNAEITT 1141
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
+ + + + S G + + +++
Sbjct: 1142 VNSHLNKATSEINVLKEKIESKVSQSDIDKSIQEIKIGGRNLALNSSRFELPARNTGTAS 1201
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQ 241
D + VS +I + TF +
Sbjct: 1202 DNYNYISIDANLLLNSEYTISANVEIVSGSIKEISIYDYPGGKCSRVPIINNRITYTFTK 1261
Query: 242 AKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDP 301
+ S + + D +D
Sbjct: 1262 RSNTVNSVLLYAGLAGETRGNSVIFTNVMLEKGNMVSDWSPAPEDTDKLIIDNIKTVTDK 1321
Query: 302 GYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAM 361
T + N + ++ + + + + + +A+
Sbjct: 1322 ITTVESKFTQENNSIKASVQDLNSTTQTITTNVSNINRDLTSKINSNLDAAKTFATDIAI 1381
Query: 362 EEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
+ + I A RI + + +
Sbjct: 1382 AKANLAKEQAIASADGKITA--EEQKRIQQAQANLNTAIAKATEAE 1425
>gi|215425623|ref|ZP_03423542.1| transmembrane transport protein mmpL1 [Mycobacterium tuberculosis
T92]
gi|289748890|ref|ZP_06508268.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis T92]
gi|289689477|gb|EFD56906.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis T92]
Length = 727
Score = 37.8 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 14/142 (9%), Positives = 35/142 (24%), Gaps = 1/142 (0%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQL-RDIA 123
+ + + + + ID+ + + D + ++ ++L IA
Sbjct: 501 QNLKDRVADLSTLTDQLQRMIDITQRTQELTRQLTDATHDMNAHTRQMRDNANELRDRIA 560
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F T I + + V T D + +T
Sbjct: 561 DFDDFWRPLRSFTYWERHCFDIPICWSMRSLLNSMDNVDKLTEDLANLTDDTERMDTTQR 620
Query: 184 TERYGLLDRNHKIKVEPQVLKD 205
L ++ + +
Sbjct: 621 QLLAQLDPTIATMQTVKDLAQT 642
>gi|56541082|gb|AAH86869.1| FLJ25770 protein [Homo sapiens]
Length = 954
Score = 37.8 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 36/401 (8%), Positives = 101/401 (25%), Gaps = 10/401 (2%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+L+ LE ++ + S + +D A +A M+ A DA+ ++
Sbjct: 541 QLKSAQSELEQTRNTLKS----MEGSDGHA-MKVAMGMQKQITAKRGQIDALQSKIQFLE 595
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVER-GTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
A +K + K+K++ + T+ + E+ L+SQ R + +
Sbjct: 596 EAMTNANKEKHFLKEEKSKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVTNMEVALD 655
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+ L + + + + T + + +
Sbjct: 656 KASLQFAECQDIIQRQEQESVRLKLQHTLDIKELQGPGYTSNSSLKPRLLQPASVTRSHS 715
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ + A+ L N +
Sbjct: 716 NVPSSQSTASFLSHHSTKANTLKEDPTRDLKQLLQELRSVINEEPAVSLSKTEEDGRTSL 775
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
+ S S + + +S +++ S + G
Sbjct: 776 GALEDRVRDCITESSLRSDMCHRSNNSLRDSTEGSKSSETLSREPVTLHAGDREDPSGCF 835
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + +S + +L + + + + + D+
Sbjct: 836 TFTSAASPSVKNSASRSFNSSPKKSPVHSLLTSSVEGSIGSTSQYRSAKPIHSSDSVKDS 895
Query: 375 ATAAAGKIGSI----SSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ G +R+ + ++ ++ + +
Sbjct: 896 QSPPIETTGKTCRKLQNRLESLQTLVEDLQLKNQAMSSMIR 936
>gi|299131802|ref|ZP_07024997.1| conserved hypothetical protein [Afipia sp. 1NLS2]
gi|298591939|gb|EFI52139.1| conserved hypothetical protein [Afipia sp. 1NLS2]
Length = 515
Score = 37.8 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 47/378 (12%), Positives = 112/378 (29%), Gaps = 2/378 (0%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
L +I L+ + +++SG + + + + A ++S LS + +++++
Sbjct: 16 SLLNIKTQLDTLTQQLASGKKSTTYSGLGLDSAFATGLRSQISMLSGYQNTQTNVTTRIN 75
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVE--RGTDSKSIQSEITQLQSQLRDIARGSSFNGENW 133
+A + +D+ + +++ T + S Q +Q + S + +
Sbjct: 76 VANLSLQGLVDMRTQVQSAATGASQVLNANGQTSGQQIGYASFTQAISLLNTQSGDRYLF 135
Query: 134 LRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRN 193
+ + + A ++ D K I + +TD T G++
Sbjct: 136 SGRATDTPSTAAADDILNGADGKDGLKAVIADRLIADQGTGNMGRLTTDATTTPGVVTVG 195
Query: 194 HKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLP 253
P LK +S ++ T + NA + T LP
Sbjct: 196 EDANPSPFGLKLSRISTSINGAVVTQPATAGPPTPSSETIDLNAATPKEGDTVTFTFTLP 255
Query: 254 AAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGN 313
+ T+ S +P + + + A + T G + A
Sbjct: 256 DQTTETVQLTATTASPAPDGSFTIDADPTVTATNMKSALDSSIQTLVKGPMVAASAMAAG 315
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+++ + P T + A V+ +D +
Sbjct: 316 QNFFDNPPQRVGGGSPVSPTATTLVDGSATTVQWYTGEQLGNPDADARNTAVAQVDGSVS 375
Query: 374 CATAAAGKIGSISSRIHL 391
+ A + + +
Sbjct: 376 VSYGATANESAFRNLLQN 393
>gi|297517042|ref|ZP_06935428.1| flagellar hook-associated protein FlgL [Escherichia coli OP50]
Length = 93
Score = 37.8 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 5/84 (5%)
Query: 368 IDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQT 427
+ + ++G+ + + + + + LVD D + +
Sbjct: 12 LKNSLNNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSY----I 67
Query: 428 QQQLAVQALSIVNNSTARILSLFR 451
QQ A+QA LSLF+
Sbjct: 68 MQQTALQASYKAFTDMQG-LSLFQ 90
>gi|289595818|ref|YP_003482514.1| PKD domain containing protein [Aciduliprofundum boonei T469]
gi|289533605|gb|ADD07952.1| PKD domain containing protein [Aciduliprofundum boonei T469]
Length = 1362
Score = 37.8 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 17/322 (5%), Positives = 67/322 (20%), Gaps = 17/322 (5%)
Query: 121 DIARGSSFNGENWLRTDLGSSTAS---------IAKSVIGSFIRDDNGKVQITTIDYYLD 171
DI+ + + + + V +
Sbjct: 904 DISHTHDYTYVWLMHDSSTHNYTIYAITSVPMITIEFENPDIYSVAVVVVSNVINETATA 963
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ + + + ++ D + +
Sbjct: 964 VYEDINATMPPTIVQVVSVRVEAELVNPSGNSYIAYAGWADWDENGTIMASFVMPNVPNV 1023
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
+ +A + S + + ++
Sbjct: 1024 NAVYTLEVTYSYTLAITNYDTYTHTWQTYFYNAYSAHPYATAQLTVIAQGNVGPNLDTIL 1083
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
N + + + + N + + ++
Sbjct: 1084 AAINGVWHEVNVSRDNLMNAINNGFTSVENGIVEIKTMGSTLNAKLSDLNANITDIQNGI 1143
Query: 352 TDAYNEKLAMEEMVSFIDTQIKC----ATAAAGKIGSIS---SRIHLQEDFIKLMRDAVE 404
+ ++ ++ +D +I IG+I + + + I+ ++
Sbjct: 1144 ATIKTDIGNIQTSLNNLDAKITDIQNGIATIKTDIGNIQTSLNNLDAKITDIQNGIATIK 1203
Query: 405 KGVGRLVDADMASESTRLSALQ 426
+G + + + +++ LQ
Sbjct: 1204 TDIGNIQ-TSLNNLDAKITKLQ 1224
>gi|94962716|gb|ABF48569.1| flagellin [Borrelia garinii]
gi|94962718|gb|ABF48570.1| flagellin [Borrelia garinii]
gi|94962720|gb|ABF48571.1| flagellin [Borrelia garinii]
gi|94962728|gb|ABF48575.1| flagellin [Borrelia garinii]
Length = 181
Score = 37.8 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 11/153 (7%), Positives = 36/153 (23%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 29 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 88
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 89 IYAANVANLFSGEGAQAAQTAPVQEGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 148
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
++ I+ I+ + +G+ +R+ +D
Sbjct: 149 SLAKIENAIRMISDQRANLGAFQNRLESIKDST 181
>gi|315636290|ref|ZP_07891540.1| flagellar hook-associated protein FlgL [Arcobacter butzleri JV22]
gi|315479379|gb|EFU70062.1| flagellar hook-associated protein FlgL [Arcobacter butzleri JV22]
Length = 376
Score = 37.4 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 31/371 (8%), Positives = 94/371 (25%), Gaps = 1/371 (0%)
Query: 73 KVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ + + + ++ ST + S S + S + D + +
Sbjct: 1 MIAQVNSSLYRLNNLNSTQDKLNYQMGGDKLEYGSDDSMLFGRLSHINDKVLTQTEIKDQ 60
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
RT++ + A A S + + ++ + + G ++ L
Sbjct: 61 LERTNVLNKNADSAISTVKLKLESVKEELIKANTSTTSIEGLEAIAQNLSGYKQNLLDLA 120
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
N +++ + + + + + +
Sbjct: 121 NTQVEGQYLFSGSDSSVKAFTMDANGKVTYNGNDSLRKIAVDEGSYRESGVNGLDLFYYT 180
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+ + + ++ + + + + A
Sbjct: 181 ANSASKGEN-LTFEEGDRILDQEGNEWTLDTVANTLSKKNWDGTFDTLSVTPPTAPATEY 239
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ + R D+ S+ L+ + +A + + ID
Sbjct: 240 SVTIPNTDGTRFEAKRSVFDLLDDAVSSLKGLDSSGNATLTYEERRAGISSAQDEIDKAN 299
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A +G+ + D I+ K + +++ +L +L+
Sbjct: 300 NNVSIAHADLGARNKTFDNSLDIIESKISQYNKTSTEIGSSNLTEVGIKLKSLELMFSAL 359
Query: 433 VQALSIVNNST 443
+S N +
Sbjct: 360 YSTISQTNQLS 370
>gi|313184697|gb|ADR49913.1| flagellin [Borrelia burgdorferi]
Length = 118
Score = 37.4 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 4/58 (6%), Positives = 15/58 (25%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHL 391
+ + ++ I+ I+ + +G+ +R+
Sbjct: 53 GAQQPTPATAPTQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLES 110
>gi|209963557|ref|YP_002296472.1| flagellar hook-associated protein 3 FlgL, putative [Rhodospirillum
centenum SW]
gi|209957023|gb|ACI97659.1| flagellar hook-associated protein 3 FlgL, putative [Rhodospirillum
centenum SW]
Length = 355
Score = 37.4 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 18/211 (8%), Positives = 64/211 (30%), Gaps = 1/211 (0%)
Query: 2 TSILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALS 61
+SI T A +R + ++ ++ + +G + A + ++ +++ +
Sbjct: 4 SSISTMALARQTRNLVRTMQSDMHTLELEIGTGKKSDVAGSVGSRAALLLDLRNARQTTA 63
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
+I SS++ + + + K + +++ + G + + + L + ++
Sbjct: 64 EYRQSIQTQSSRLTLMQEALDKVRGSATQVRDLALSVSGSGVGAAAATIDEAAL-NAIQT 122
Query: 122 IARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSST 181
++ + + + + + ++ L P + D
Sbjct: 123 LSSMFNSSQSGRYLFAGTRFDTRPMQPPTETAPSGIAPLDAVKSVLSSLGPTSTAADVDA 182
Query: 182 DGTERYGLLDRNHKIKVEPQVLKDIDVSVYD 212
GL + +
Sbjct: 183 ALNGPNGLSSIFSDTYGGGPAAPENFSKTFF 213
>gi|97271823|gb|ABF48565.2| flagellin [Borrelia garinii]
gi|97271826|gb|ABF48568.2| flagellin [Borrelia garinii]
Length = 181
Score = 37.4 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 11/153 (7%), Positives = 36/153 (23%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 29 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 88
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 89 IYAANVANLFSGEGAQAAQTAPVQDGVQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 148
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
++ I+ I+ + +G+ +R+ +D
Sbjct: 149 SLAKIENAIRMISDQRANLGAFQNRLESIKDST 181
>gi|254168219|ref|ZP_04875065.1| PKD domain protein [Aciduliprofundum boonei T469]
gi|197622728|gb|EDY35297.1| PKD domain protein [Aciduliprofundum boonei T469]
Length = 1397
Score = 37.4 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 17/322 (5%), Positives = 67/322 (20%), Gaps = 17/322 (5%)
Query: 121 DIARGSSFNGENWLRTDLGSSTAS---------IAKSVIGSFIRDDNGKVQITTIDYYLD 171
DI+ + + + + V +
Sbjct: 940 DISHTHDYTYVWLMHDSSTHNYTIYAITSVPMITIEFENPDIYSVAVVVVSNVINETASA 999
Query: 172 PETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAW 231
+ + + + ++ D + +
Sbjct: 1000 VYEDINATMPPTIVQVVSVRVEAELVNPSGNSYIAYAGWADWDENGTIMASFVMPNVPNV 1059
Query: 232 LKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRA 291
+ +A + S + + ++
Sbjct: 1060 NAVYTLEVTYSYTLAITNYDTYTHTWQTYFYNAYSAHPYATAQLTVIAQGNVGPNLDTIL 1119
Query: 292 TTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHAN 351
N + + + + N + + ++
Sbjct: 1120 AAINGVWHEVNVSRDNLMNAINNGFTSVENGIVEIKTMGSTLNAKLSDLNANITDIQNGI 1179
Query: 352 TDAYNEKLAMEEMVSFIDTQIKC----ATAAAGKIGSIS---SRIHLQEDFIKLMRDAVE 404
+ ++ ++ +D +I IG+I + + + I+ ++
Sbjct: 1180 ATIKTDIGNIQTSLNNLDAKITDIQNGIATIKTDIGNIQTSLNNLDAKITDIQNGIATIK 1239
Query: 405 KGVGRLVDADMASESTRLSALQ 426
+G + + + +++ LQ
Sbjct: 1240 TDIGNIQ-TSLNNLDAKITKLQ 1260
>gi|78482922|emb|CAJ20130.1| flagellin [Borrelia spielmanii]
gi|78482924|emb|CAJ20131.1| flagellin [Borrelia spielmanii]
Length = 118
Score = 37.4 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 8/114 (7%), Positives = 26/114 (22%)
Query: 284 NSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVT 343
S N + + + T +
Sbjct: 3 TSWTLRVHVGANQDEAIAVNIYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPTPATA 62
Query: 344 LNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIK 397
+ + + ++ I+ I+ + +G+ +R+ +D +
Sbjct: 63 PSQGGVNSPVNVTTTVDANTSLAKIENAIRMVSDQRANLGAFQNRLESIKDSTE 116
>gi|294085892|ref|YP_003552652.1| ATPase [Candidatus Puniceispirillum marinum IMCC1322]
gi|292665467|gb|ADE40568.1| ATPase involved in DNA repair [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 553
Score = 37.4 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 15/138 (10%), Positives = 41/138 (29%), Gaps = 1/138 (0%)
Query: 287 IWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNI 346
+ ++ + + + +D + +D ++D+
Sbjct: 149 AAGHQEMLDKLSDAHAHWMQSKRNLATAKLELDQARADEEWLRDAVHQLDALSPSSGEEA 208
Query: 347 TRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+ D + E ++ D + A +GS + + D
Sbjct: 209 QLVSERDMLANVGKIGETLALADHALTDENGAQASLGSAMATLEKSASLAGSALDNALAA 268
Query: 407 VGRLVDADMASESTRLSA 424
+ R DA+++ + +SA
Sbjct: 269 LSR-ADAELSEAISEISA 285
>gi|330889075|gb|EGH21736.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
mori str. 301020]
Length = 154
Score = 37.4 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 28/76 (36%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
+ I + I A+ A G+ Q L++ G V+AD+ +TRL
Sbjct: 69 SALGNIASSIDQASTARSAGGARQLAATAQGTTNDLLKGNNTVEQGTYVNADIVEATTRL 128
Query: 423 SALQTQQQLAVQALSI 438
+ +T + Q
Sbjct: 129 TLQKTMLDASQQVFVQ 144
>gi|320352670|ref|YP_004194009.1| type 11 methyltransferase [Desulfobulbus propionicus DSM 2032]
gi|320121172|gb|ADW16718.1| Methyltransferase type 11 [Desulfobulbus propionicus DSM 2032]
Length = 586
Score = 37.4 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 22/214 (10%), Positives = 54/214 (25%), Gaps = 10/214 (4%)
Query: 8 HSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNG----ALSAV 63
+A +A Q+ + ++ + RV R AA +A AQ ++ +
Sbjct: 285 TAAQNAEQRAQRAETAVQNAEQRV---QRAETAAQSAE--QRAQRAETAVQNAEQRVQQA 339
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
A + A+ + A + E+ + + + Q +IA
Sbjct: 340 ETAAQSAEQRAQRAETAVQNAEQRVQRA-ETAAQSAEQRAQRAETAVQNAEQRVQQAEIA 398
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
++ T S+ + ++ + + I L+ + +
Sbjct: 399 VQNAEQRVQRAETAAQSAEQRVQQAETAVQNAEQRVQQAIAIHQAVLNSRSWRTTAPLRW 458
Query: 184 TERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTI 217
+
Sbjct: 459 MSTAIRWVGRGSRAWITLAPGSRPRRTARQAAMH 492
>gi|146311053|ref|YP_001176127.1| macrolide transporter subunit MacA [Enterobacter sp. 638]
gi|145317929|gb|ABP60076.1| efflux transporter, RND family, MFP subunit [Enterobacter sp. 638]
Length = 371
Score = 37.4 bits (84), Expect = 4.7, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+DT +IG+I ++I + + + +E R+V A MA E T+++ LQ
Sbjct: 145 DLDTAATELAVKQAQIGTIDAQIKRNQASLDTAKANLE--YTRIV-APMAGEVTQITTLQ 201
Query: 427 TQQQLAVQALSIVNNSTARILSL 449
++ + IL+L
Sbjct: 202 -----GQTVIA-AQQAP-NILTL 217
>gi|224542346|ref|ZP_03682885.1| hypothetical protein CATMIT_01525 [Catenibacterium mitsuokai DSM
15897]
gi|224524728|gb|EEF93833.1| hypothetical protein CATMIT_01525 [Catenibacterium mitsuokai DSM
15897]
Length = 1014
Score = 37.4 bits (84), Expect = 4.8, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 26/85 (30%), Gaps = 26/85 (30%)
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDF----IKLMRDAVEKGVGRLVDADMASESTRL 422
++ A ++ SR+ + E+ + ++ ++ ++
Sbjct: 400 QLEKAQSQLDEAEAELNIQQSRLEVTENNAKVQLNAAKEQLDAAKAQI------------ 447
Query: 423 SALQTQQQLAVQALSIVNNSTARIL 447
Q QQQL N +L
Sbjct: 448 --DQAQQQL--------NQIPKGVL 462
>gi|134093785|ref|YP_001098860.1| cobalt-zinc-cadmium resistance protein CzcB [Herminiimonas
arsenicoxydans]
gi|133737688|emb|CAL60733.1| Cobalt-zinc-cadmium resistance protein CzcB (Cation efflux system
protein CzcB) [Herminiimonas arsenicoxydans]
Length = 526
Score = 37.4 bits (84), Expect = 5.0, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 33/92 (35%), Gaps = 4/92 (4%)
Query: 354 AYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+++ ++++ I + + + ++ + R+ L + + E+ + D
Sbjct: 244 NAGDQVKKGQVLAVISS--QSLSDQRSELLAAQKRLSLARTTYEREKSLWEEKISAEQD- 300
Query: 414 DMASESTRLSALQTQQQLAVQALSIVNNSTAR 445
+ Q Q A Q L+ + S +
Sbjct: 301 -YLQARAAMQEAQIMAQSAQQKLAALGASPSS 331
>gi|225016658|ref|ZP_03705850.1| hypothetical protein CLOSTMETH_00567 [Clostridium methylpentosum
DSM 5476]
gi|224950622|gb|EEG31831.1| hypothetical protein CLOSTMETH_00567 [Clostridium methylpentosum
DSM 5476]
Length = 1187
Score = 37.4 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 9/106 (8%), Positives = 34/106 (32%)
Query: 41 ADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVE 100
+D+ + ++ + + ++ S + +S+ + + +
Sbjct: 447 SDDPGIVQQREQLEKQLAQIQRIRASLASTKSTLQTGLDKLSQISNADELYAQAMAQIEQ 506
Query: 101 RGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIA 146
T + + ++ +QL + G + + + + IA
Sbjct: 507 AQTALDTQKKQVQDGLTQLDQLVSGKAQLEQAQQQLENARLELQIA 552
>gi|3337413|gb|AAC27443.1| flagellin [Burkholderia pseudomallei]
Length = 249
Score = 37.4 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 9/99 (9%), Positives = 32/99 (32%)
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+++ +T+ S D + +N + + + + + + ID +
Sbjct: 151 TVTLNSAATSSLSAADQAAAAAMQTQVNAVNQPQTVSNLNISTQTGAYQAMVSIDNALAT 210
Query: 375 ATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+G+ +R + + + + ++ A
Sbjct: 211 VNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSA 249
>gi|94962724|gb|ABF48573.1| flagellin [Borrelia garinii]
gi|97271824|gb|ABF48566.2| flagellin [Borrelia garinii]
Length = 181
Score = 37.4 bits (84), Expect = 5.2, Method: Composition-based stats.
Identities = 11/153 (7%), Positives = 36/153 (23%)
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
+ + + + T+ G + + A+ S N +
Sbjct: 29 QYNQMHMLSNKSASQNVRTAEELGMQPAKINTPASLSGSQASWTLRVHVGANQDEAIAVN 88
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ + T + + + +
Sbjct: 89 IYAANVANLFSGEGAQAAQTAPVQEGAQQEGAQQPAPATAPSQGGVNSPVNVTTTVDANT 148
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFI 396
++ I+ I+ + +G+ +R+ +D
Sbjct: 149 SLAKIENAIRMISDQRANLGAFQNRLESIKDST 181
>gi|217325931|ref|ZP_03442015.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. TW14588]
gi|217322152|gb|EEC30576.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. TW14588]
Length = 380
Score = 37.4 bits (84), Expect = 5.2, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 10/92 (10%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ +DT +IG+I ++I + + + ++ R+V A MA
Sbjct: 145 AQTQAVSLQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLD--YTRIV-APMAG 201
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
E T+++ LQ ++ + IL+L
Sbjct: 202 EVTQITTLQ-----GQTVIA-AQQAP-NILTL 226
>gi|157738147|ref|YP_001490831.1| flagellar hook-associated protein FlgL [Arcobacter butzleri RM4018]
gi|157700001|gb|ABV68161.1| flagellar hook-associated protein FlgL [Arcobacter butzleri RM4018]
Length = 376
Score = 37.4 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 34/371 (9%), Positives = 98/371 (26%), Gaps = 1/371 (0%)
Query: 73 KVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGEN 132
+ + + + ++ ST + S S + S + D + +
Sbjct: 1 MIAQVNSSLYRLNNLNSTQDKLNYQMGGEKLEYGSDDSMLFGRLSHINDKVLTQTEIKDQ 60
Query: 133 WLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDR 192
RT++ + A A S + + ++ + + G ++ L
Sbjct: 61 LERTNVLNKNADSAISTVKLKLESVKEELIKANTSTTSIEGLEAIAQNLSGYKQNLLDLA 120
Query: 193 NHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPL 252
N +++ + + + + + +
Sbjct: 121 NTQVEGQYLFSGSDSSVKAFTMDANGKVTYNGNDSLRKIAVDEGSYRESGVNGLELFYYT 180
Query: 253 PAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVG 312
+ + T + + ++I + S + + A
Sbjct: 181 ANSASKGE-TLTFEDADRILDQEGNEWTLDTATNILSKKNWDGSFDTLTVTPPTAPATEY 239
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ + R D+ S+ L+ + +A + + ID
Sbjct: 240 SVTVPNTDGTRFEAKRSVFDLLDDAVSSLKGLDSSGNATLTYEQRRAGISSAQDEIDKAN 299
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLA 432
+ A +G+ + + D I+ K + +++ +L +L+
Sbjct: 300 NNVSIAHADLGARNKTFNNSLDIIESKISQYNKTYTEIGSSNLTEVGIKLKSLELMFSAL 359
Query: 433 VQALSIVNNST 443
+S N +
Sbjct: 360 YSTISQTNQLS 370
>gi|110804881|ref|YP_688401.1| macrolide transporter subunit MacA [Shigella flexneri 5 str. 8401]
gi|189406316|ref|ZP_03008148.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC508]
gi|12513908|gb|AAG55260.1|AE005269_4 putative membrane protein [Escherichia coli O157:H7 str. EDL933]
gi|13360423|dbj|BAB34387.1| putative membrane protein [Escherichia coli O157:H7 str. Sakai]
gi|110614429|gb|ABF03096.1| putative membrane protein [Shigella flexneri 5 str. 8401]
gi|189375365|gb|EDU93781.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC508]
gi|209775148|gb|ACI85886.1| putative membrane protein [Escherichia coli]
gi|209775150|gb|ACI85887.1| putative membrane protein [Escherichia coli]
gi|209775152|gb|ACI85888.1| putative membrane protein [Escherichia coli]
gi|209775154|gb|ACI85889.1| putative membrane protein [Escherichia coli]
gi|209775156|gb|ACI85890.1| putative membrane protein [Escherichia coli]
Length = 380
Score = 37.4 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 10/92 (10%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ +DT +IG+I ++I + + + ++ R+V A MA
Sbjct: 145 AQTQAVSLQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLD--YTRIV-APMAG 201
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
E T+++ LQ ++ + IL+L
Sbjct: 202 EVTQITTLQ-----GQTVIA-AQQAP-NILTL 226
>gi|289679010|ref|ZP_06499900.1| flagellar hook-associated protein FlgL [Pseudomonas syringae pv.
syringae FF5]
Length = 140
Score = 37.4 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADM 415
N A+ + + + I+ A+ A G+ Q L++ G V+AD+
Sbjct: 48 NMTAALNSALGNMSSAIEQASTARSSGGARQLAATAQGTTNDLLKGNNTTEQGTYVNADI 107
Query: 416 ASESTRLSALQTQQQLAVQ---ALSIVNNSTA 444
+TRL+ +T + Q LS +N +
Sbjct: 108 VEATTRLTLQKTMLDASQQVFTMLSKLNLFSQ 139
>gi|313184517|gb|ADR49823.1| flagellin [Borrelia burgdorferi]
gi|313184519|gb|ADR49824.1| flagellin [Borrelia burgdorferi]
gi|313184521|gb|ADR49825.1| flagellin [Borrelia burgdorferi]
gi|313184659|gb|ADR49894.1| flagellin [Borrelia burgdorferi]
Length = 118
Score = 37.4 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 5/64 (7%), Positives = 19/64 (29%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 112
Query: 394 DFIK 397
D +
Sbjct: 113 DSTE 116
>gi|109074411|ref|XP_001095126.1| PREDICTED: coiled-coil domain-containing protein 158-like isoform 1
[Macaca mulatta]
gi|297292674|ref|XP_002804119.1| PREDICTED: coiled-coil domain-containing protein 158-like isoform 2
[Macaca mulatta]
Length = 1113
Score = 37.4 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 36/401 (8%), Positives = 101/401 (25%), Gaps = 10/401 (2%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+L+ LE ++ + S + +D A +A M+ A DA+ ++
Sbjct: 700 QLKSAQSELEQTRNTLKS----MEGSDGHA-MKVAMGMQKQITAKRGQIDALQSKIQFLE 754
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVER-GTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
A +K + K+K++ + T+ + E+ L+SQ R + +
Sbjct: 755 EAMTNANKEKHFLKEEKSKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVTNMEVALD 814
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+ L + + + + T + + +
Sbjct: 815 KASLQFAECQDIIQRQEQESVRLKLQHTLDIKELQGPGYTSNSSLKPRLLQPASVTRSHS 874
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ + A+ L N +
Sbjct: 875 NVPSSQSTASFLSHHSTKANTLKEDPTRDLKQLLQELRSVINEEPAVSLSKTEEDGRTSL 934
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
+ S S + + +S +++ S + G
Sbjct: 935 GALEDRVRDCITESSLRSDMCHRSNNSLRDSTEGSKSSETLSREPVTLHAGDMEDPSGCF 994
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + +S + +L + + + + + D+
Sbjct: 995 TFASAASPSVKNSASRSFNSSPKKSPVHSLLTSSVEGSIGSASQYRSAKPIHSSDSVKDS 1054
Query: 375 ATAAAGKIGSI----SSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ G +R+ + ++ ++ + +
Sbjct: 1055 QSPPIETTGKTCRKLQNRLESLQTLVEDLQMKNQAMSSMIR 1095
>gi|251799693|ref|YP_003014424.1| peptidase M23 [Paenibacillus sp. JDR-2]
gi|247547319|gb|ACT04338.1| Peptidase M23 [Paenibacillus sp. JDR-2]
Length = 390
Score = 37.0 bits (83), Expect = 5.5, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 37/93 (39%), Gaps = 12/93 (12%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAAD----NAAY-----WSIAQIMKSDNGALSA 62
+A+ + IN +L + ++ +++ AD + A + + L
Sbjct: 24 NAASSMDKINKDLAAAKKQIEEAQKIAKNADVKKADIAGKKEDAQQAILKLNAQ---LDQ 80
Query: 63 VSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKI 95
V+D + +VD +A + KA + T ++
Sbjct: 81 VADNLNYVQDQVDTKEAELQKAGKELDTAIEQV 113
>gi|3337411|gb|AAC27442.1| flagellin [Burkholderia pseudomallei]
Length = 254
Score = 37.0 bits (83), Expect = 5.7, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 31/101 (30%)
Query: 313 NTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI 372
+ T +T+ S D + +N + + + + + + ID +
Sbjct: 154 FQTLALSTSATSALSATDQANATAMVAQINAVNKPQTVSNLDISTQTGAYQAMVSIDNAL 213
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA 413
+G+ +R + + + + ++ A
Sbjct: 214 ATVNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSA 254
>gi|124809887|ref|XP_001348709.1| SNARE protein, putative [Plasmodium falciparum 3D7]
gi|23497608|gb|AAN37148.1| SNARE protein, putative [Plasmodium falciparum 3D7]
gi|109692335|gb|ABG38004.1| SNARE protein [Plasmodium falciparum]
Length = 967
Score = 37.0 bits (83), Expect = 5.7, Method: Composition-based stats.
Identities = 25/342 (7%), Positives = 75/342 (21%), Gaps = 8/342 (2%)
Query: 85 IDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTAS 144
+++ KN + + ++ + + + I F+
Sbjct: 266 NNIIERYKNVFDILNNKALVESEMNTQGKKRKLE-DIIVLDERFHLLIDDIYKNRKHFDV 324
Query: 145 IAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIK-----VE 199
++ I +++ N K + + + + T I+
Sbjct: 325 LSICHILISLKELNYKHFLLFNSFVNPLKNFDIYIKEQFTNNQKFSFICSTIELLLECFN 384
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAP 259
+ S K + + + + +
Sbjct: 385 TYIWAGYYNLNIYNKLMNSILLNKFIYINKNTIYTQHYEQLKNYTYMEYDYNINYPIKIK 444
Query: 260 NTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVD 319
+ + ++ D + ++ N N
Sbjct: 445 DVLNFFEINEDFYYIGHVKKNNDRVYDGINELHNCDKNQNEENKINMNDIINQNNSEKQI 504
Query: 320 TESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAA 379
+ + N + + +++ ++ ID I
Sbjct: 505 DLNINNIDDNKNNIDDHINNIDDNKNNIDDHINNIDDHINNIDDYINNIDDHINNIDDHI 564
Query: 380 GKIGSISSRIHLQEDFIKLMRDAVE--KGVGRLVDADMASES 419
I + I + I + V+ +++ D ES
Sbjct: 565 NNIDDHINNIDDHINNIDDHINNVDIINKKDNVLNVDYIKES 606
>gi|296531744|ref|ZP_06894569.1| possible flagellar hook-associated protein [Roseomonas cervicalis
ATCC 49957]
gi|296267927|gb|EFH13729.1| possible flagellar hook-associated protein [Roseomonas cervicalis
ATCC 49957]
Length = 363
Score = 37.0 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 28/239 (11%), Positives = 64/239 (26%), Gaps = 1/239 (0%)
Query: 10 AMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
A+ + + + L V+ +SSG + A S+ + D A+ ++ L
Sbjct: 13 ALGRQRDIARLQSELAVLTAEMSSGRKADPARALGVGASLLYKLYGDVQQGEAIRNSTSL 72
Query: 70 GSSKVDIAKAGMSKAIDVMSTIK-NKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSF 128
++ A+ ++ +M + + +G I S ++ + D+
Sbjct: 73 AGQRLKAAQEALTSVGGLMDQMSPEILKTDALKGNGYTIIASNAREVLGSMTDLLNTHWD 132
Query: 129 NGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYG 188
+ TD + + ++ V T L+
Sbjct: 133 GQNLFGGTDSSQPPLAPSAGLLAWAQGRLGAAVTAAGGALDAAQATALIGQFDTMFANVQ 192
Query: 189 LLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIAT 247
+ +S S + +G L + A A
Sbjct: 193 RDAAGATSFYGLVYRSTSRTDMAGSSDPESDAPSLIRIGAGETLSWNVRADNAAFKDAF 251
>gi|295704488|ref|YP_003597563.1| hypothetical protein BMD_2365 [Bacillus megaterium DSM 319]
gi|294802147|gb|ADF39213.1| putative membrane protein [Bacillus megaterium DSM 319]
Length = 889
Score = 37.0 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 39/109 (35%), Gaps = 16/109 (14%)
Query: 13 ASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSS 72
A+ L IN L+++ ++S+ V A +I++ + + L ++ +
Sbjct: 517 AADGLAQINQQLQLISTQLSTTGNVQQAV--PQLVAISKQLTTIQTGLQQANENLSAQQG 574
Query: 73 KVDI--------------AKAGMSKAIDVMSTIKNKITAGVERGTDSKS 107
+V A G++K D + + + + T +
Sbjct: 575 QVGTLSDSINQLAKGVNSANDGLTKISDGLIKATDMLDNMSDSSTVRDT 623
>gi|313184709|gb|ADR49919.1| flagellin [Borrelia burgdorferi]
gi|313184711|gb|ADR49920.1| flagellin [Borrelia burgdorferi]
gi|313184713|gb|ADR49921.1| flagellin [Borrelia burgdorferi]
gi|313184715|gb|ADR49922.1| flagellin [Borrelia burgdorferi]
gi|313184717|gb|ADR49923.1| flagellin [Borrelia burgdorferi]
gi|313184719|gb|ADR49924.1| flagellin [Borrelia burgdorferi]
gi|313184721|gb|ADR49925.1| flagellin [Borrelia burgdorferi]
gi|313184723|gb|ADR49926.1| flagellin [Borrelia burgdorferi]
gi|313184725|gb|ADR49927.1| flagellin [Borrelia burgdorferi]
Length = 118
Score = 37.0 bits (83), Expect = 5.9, Method: Composition-based stats.
Identities = 4/64 (6%), Positives = 19/64 (29%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMVSDQRANLGAFQNRLESIK 112
Query: 394 DFIK 397
+ +
Sbjct: 113 NSTE 116
>gi|313184699|gb|ADR49914.1| flagellin [Borrelia burgdorferi]
Length = 118
Score = 37.0 bits (83), Expect = 5.9, Method: Composition-based stats.
Identities = 4/64 (6%), Positives = 19/64 (29%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 112
Query: 394 DFIK 397
+ +
Sbjct: 113 NSTE 116
>gi|119715506|ref|YP_922471.1| peptidase M23B [Nocardioides sp. JS614]
gi|119536167|gb|ABL80784.1| peptidase M23B [Nocardioides sp. JS614]
Length = 419
Score = 37.0 bits (83), Expect = 5.9, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDA--DMASESTR 421
+D I + A G++ + S+R+ E + M+ +E RLVDA D+A
Sbjct: 66 AQGALDRAIHELSTARGELRAASARLQAAEIRDREMQARLETAEQRLVDAQTDLADGQAA 125
Query: 422 L 422
L
Sbjct: 126 L 126
>gi|289445940|ref|ZP_06435684.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis CPHL_A]
gi|289418898|gb|EFD16099.1| transmembrane transporter mmpL1 [Mycobacterium tuberculosis CPHL_A]
Length = 577
Score = 37.0 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 14/142 (9%), Positives = 35/142 (24%), Gaps = 1/142 (0%)
Query: 65 DAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQL-RDIA 123
+ + + + + ID+ + + D + ++ ++L IA
Sbjct: 120 QNLKDRVADLSTLTDQLQRMIDITQRTQELTRQLTDATHDMNAHTRQMRDNANELRDRIA 179
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
F T I + + V T D + +T
Sbjct: 180 DFDDFWRPLRSFTYWERHCFDIPICWSMRSLLNSMDNVDKLTEDLANLTDDTERMDTTQR 239
Query: 184 TERYGLLDRNHKIKVEPQVLKD 205
L ++ + +
Sbjct: 240 QLLAQLDPTIATMQTVKDLAQT 261
>gi|161503930|ref|YP_001571042.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865277|gb|ABX21900.1| hypothetical protein SARI_02021 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 372
Score = 37.0 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+DT +IG+I ++I + + + +E R+V A MA E T+++ LQ
Sbjct: 146 DLDTAATELAVKQARIGTIDAQIKRNQASLDTAKTNLE--YTRIV-APMAGEVTQITTLQ 202
Query: 427 TQQQLAVQALSIVNNSTARILSL 449
++ + IL+L
Sbjct: 203 -----GQTVIA-AQQAP-NILTL 218
>gi|134114632|ref|XP_774024.1| hypothetical protein CNBH0700 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256654|gb|EAL19377.1| hypothetical protein CNBH0700 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1132
Score = 37.0 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 5/92 (5%)
Query: 36 RVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG-----MSKAIDVMST 90
R AD+A +I ++S + + + G + + + S
Sbjct: 744 RNVPPADDAETAAIIMSLRSKLKTQTDEVTNLTNKIESLQKEAKGEKGQLIEEVESLSSQ 803
Query: 91 IKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
+ + T E ++ ++ E+ L+ D+
Sbjct: 804 VASLSTQLGESVKRTEELEGELNTLKQSYSDL 835
>gi|313184701|gb|ADR49915.1| flagellin [Borrelia burgdorferi]
gi|313184703|gb|ADR49916.1| flagellin [Borrelia burgdorferi]
gi|313184705|gb|ADR49917.1| flagellin [Borrelia burgdorferi]
gi|313184707|gb|ADR49918.1| flagellin [Borrelia burgdorferi]
gi|313184727|gb|ADR49928.1| flagellin [Borrelia burgdorferi]
Length = 118
Score = 37.0 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 4/64 (6%), Positives = 18/64 (28%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPAPATAPAQGGVNSPVNVTTTVDANTSLAKIENAIRMVSDQRANLGAFQNRLESIK 112
Query: 394 DFIK 397
+ +
Sbjct: 113 NSTE 116
>gi|321471639|gb|EFX82611.1| C1q and tumor necrosis factor-related protein-like protein 2
[Daphnia pulex]
Length = 673
Score = 37.0 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 3/50 (6%), Positives = 16/50 (32%), Gaps = 1/50 (2%)
Query: 373 KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
++G+ + + + + + + L ++++ L
Sbjct: 423 DTVDNLRKELGATLNLLETTTNNLASTTSSTNAVIAELT-TKFNAQTSEL 471
>gi|291568352|dbj|BAI90624.1| HlyD family secretion protein [Arthrospira platensis NIES-39]
Length = 514
Score = 37.0 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 19/56 (33%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ + + I + ++A IGS + + E I+ V R+
Sbjct: 250 TAEEGVRVAEANISSARATISSARANIGSAQANVESAESNIRSAEAEVRSAQARVR 305
>gi|229583961|ref|YP_002842462.1| Tetratricopeptide TPR_2 repeat protein [Sulfolobus islandicus
M.16.27]
gi|228019010|gb|ACP54417.1| Tetratricopeptide TPR_2 repeat protein [Sulfolobus islandicus
M.16.27]
Length = 1977
Score = 37.0 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 35/410 (8%), Positives = 104/410 (25%), Gaps = 23/410 (5%)
Query: 8 HSAMSASQK-LRDINYNLEVVQDRVSSGLRVS---DAADNAAYWSIAQIMKSDNGALSAV 63
+ ++A L++ L+ Q + ++ D + ++K+ +
Sbjct: 393 VNYLNALSNVLQNNINLLQKAQQYL---NNINVQQYEND----LNTINVLKTAIIGVQNA 445
Query: 64 SDAI---GLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSK------SIQSEITQ 114
++I ++ + ++ + +S +KN + SI + +T
Sbjct: 446 LNSIPQTSDLNAILQTKNNVLNTIENAISVVKNLENNQDLSQFVQEIESVLDSIYNNMTI 505
Query: 115 LQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
S ++D SF T + N + Y
Sbjct: 506 YYSAVQDAFDAESFINSANNYLSQKIVTNDPVQYYSSLIKNYSNAIYDLDKAIKYAVRAN 565
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ + + K ++ V V T +
Sbjct: 566 QEFQQLSIKSPFDIDKLNSTKDELTQFVEAFNLVLNAYEGILSIKLSGNSFTDYYRYYSE 625
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTK 294
T + + S + ++ + T
Sbjct: 626 LANTNQYYLNELENSNFSFKSVQDFMNSIVNSFKNQQTAYNFLANAFNEIMNVASQTTDP 685
Query: 295 NSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDA 354
+ I ++ + + + +L + ++ S L T +
Sbjct: 686 HEIAIAFKNASNMLLHANVSDQNLKNVLDSLAEQFNISYYYYYYLSQAELYGTYAKGSRD 745
Query: 355 YNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVE 404
++ + + ++ A ++G ++I ++ + ++
Sbjct: 746 ITTQIYY---LEKEEQALQTARQFLVQLGGSPAQIDSVIKNVQTSINILQ 792
>gi|168765083|ref|ZP_02790090.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC4501]
gi|189365046|gb|EDU83462.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC4501]
Length = 371
Score = 37.0 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 10/92 (10%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ +DT +IG+I ++I + + + ++ R+V A MA
Sbjct: 136 AQTQAVSLQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLD--YTRIV-APMAG 192
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
E T+++ LQ ++ + IL+L
Sbjct: 193 EVTQITTLQ-----GQTVIA-AQQAP-NILTL 217
>gi|30062366|ref|NP_836537.1| macrolide transporter subunit MacA [Shigella flexneri 2a str.
2457T]
gi|38703901|ref|NP_308991.2| macrolide transporter subunit MacA [Escherichia coli O157:H7 str.
Sakai]
gi|56479754|ref|NP_706764.2| macrolide transporter subunit MacA [Shigella flexneri 2a str. 301]
gi|161367628|ref|NP_286650.2| macrolide transporter subunit MacA [Escherichia coli O157:H7
EDL933]
gi|168752459|ref|ZP_02777481.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC4113]
gi|168758794|ref|ZP_02783801.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC4401]
gi|168769855|ref|ZP_02794862.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC4486]
gi|168783789|ref|ZP_02808796.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC4076]
gi|168789130|ref|ZP_02814137.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC869]
gi|208806203|ref|ZP_03248540.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC4206]
gi|208815637|ref|ZP_03256816.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC4045]
gi|208822209|ref|ZP_03262528.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC4042]
gi|209396080|ref|YP_002269552.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC4115]
gi|254792079|ref|YP_003076916.1| macrolide transporter subunit MacA [Escherichia coli O157:H7 str.
TW14359]
gi|261225534|ref|ZP_05939815.1| macrolide-specific efflux protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261258497|ref|ZP_05951030.1| macrolide-specific efflux protein [Escherichia coli O157:H7 str.
FRIK966]
gi|291281882|ref|YP_003498700.1| macrolide transporter subunit MacA [Escherichia coli O55:H7 str.
CB9615]
gi|54037773|sp|P64177|MACA_SHIFL RecName: Full=Macrolide-specific efflux protein macA; Flags:
Precursor
gi|54041278|sp|P64176|MACA_ECO57 RecName: Full=Macrolide-specific efflux protein macA; Flags:
Precursor
gi|30040611|gb|AAP16343.1| putative membrane protein [Shigella flexneri 2a str. 2457T]
gi|56383305|gb|AAN42471.2| putative membrane protein [Shigella flexneri 2a str. 301]
gi|188013697|gb|EDU51819.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC4113]
gi|188998907|gb|EDU67893.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC4076]
gi|189354439|gb|EDU72858.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC4401]
gi|189361163|gb|EDU79582.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC4486]
gi|189371149|gb|EDU89565.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC869]
gi|208726004|gb|EDZ75605.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC4206]
gi|208732285|gb|EDZ80973.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC4045]
gi|208737694|gb|EDZ85377.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC4042]
gi|209157480|gb|ACI34913.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC4115]
gi|254591479|gb|ACT70840.1| macrolide-specific efflux protein [Escherichia coli O157:H7 str.
TW14359]
gi|281600207|gb|ADA73191.1| Macrolide-specific efflux protein macA [Shigella flexneri 2002017]
gi|290761755|gb|ADD55716.1| macrolide transporter subunit MacA [Escherichia coli O55:H7 str.
CB9615]
gi|313650209|gb|EFS14621.1| macrolide-specific efflux protein macA [Shigella flexneri 2a str.
2457T]
gi|320192636|gb|EFW67277.1| Macrolide-specific efflux protein MacA [Escherichia coli O157:H7
str. EC1212]
gi|320637749|gb|EFX07541.1| macrolide transporter subunit MacA [Escherichia coli O157:H7 str.
G5101]
gi|320642872|gb|EFX12073.1| macrolide transporter subunit MacA [Escherichia coli O157:H- str.
493-89]
gi|320648329|gb|EFX16984.1| macrolide transporter subunit MacA [Escherichia coli O157:H- str. H
2687]
gi|320659791|gb|EFX27347.1| macrolide transporter subunit MacA [Escherichia coli O55:H7 str.
USDA 5905]
gi|320664261|gb|EFX31412.1| macrolide transporter subunit MacA [Escherichia coli O157:H7 str.
LSU-61]
Length = 371
Score = 37.0 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 10/92 (10%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ +DT +IG+I ++I + + + ++ R+V A MA
Sbjct: 136 AQTQAVSLQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLD--YTRIV-APMAG 192
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
E T+++ LQ ++ + IL+L
Sbjct: 193 EVTQITTLQ-----GQTVIA-AQQAP-NILTL 217
>gi|313184557|gb|ADR49843.1| flagellin [Borrelia burgdorferi]
Length = 118
Score = 37.0 bits (83), Expect = 6.7, Method: Composition-based stats.
Identities = 5/64 (7%), Positives = 19/64 (29%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 112
Query: 394 DFIK 397
D +
Sbjct: 113 DSTE 116
>gi|313184549|gb|ADR49839.1| flagellin [Borrelia burgdorferi]
gi|313184553|gb|ADR49841.1| flagellin [Borrelia burgdorferi]
gi|313184555|gb|ADR49842.1| flagellin [Borrelia burgdorferi]
gi|313184559|gb|ADR49844.1| flagellin [Borrelia burgdorferi]
gi|313184561|gb|ADR49845.1| flagellin [Borrelia burgdorferi]
gi|313184563|gb|ADR49846.1| flagellin [Borrelia burgdorferi]
gi|313184565|gb|ADR49847.1| flagellin [Borrelia burgdorferi]
gi|313184569|gb|ADR49849.1| flagellin [Borrelia burgdorferi]
gi|313184571|gb|ADR49850.1| flagellin [Borrelia burgdorferi]
gi|313184573|gb|ADR49851.1| flagellin [Borrelia burgdorferi]
gi|313184575|gb|ADR49852.1| flagellin [Borrelia burgdorferi]
gi|313184577|gb|ADR49853.1| flagellin [Borrelia burgdorferi]
gi|313184589|gb|ADR49859.1| flagellin [Borrelia burgdorferi]
gi|313184591|gb|ADR49860.1| flagellin [Borrelia burgdorferi]
gi|313184593|gb|ADR49861.1| flagellin [Borrelia burgdorferi]
gi|313184595|gb|ADR49862.1| flagellin [Borrelia burgdorferi]
gi|313184597|gb|ADR49863.1| flagellin [Borrelia burgdorferi]
gi|313184599|gb|ADR49864.1| flagellin [Borrelia burgdorferi]
gi|313184601|gb|ADR49865.1| flagellin [Borrelia burgdorferi]
gi|313184603|gb|ADR49866.1| flagellin [Borrelia burgdorferi]
gi|313184605|gb|ADR49867.1| flagellin [Borrelia burgdorferi]
gi|313184607|gb|ADR49868.1| flagellin [Borrelia burgdorferi]
gi|313184609|gb|ADR49869.1| flagellin [Borrelia burgdorferi]
gi|313184611|gb|ADR49870.1| flagellin [Borrelia burgdorferi]
gi|313184613|gb|ADR49871.1| flagellin [Borrelia burgdorferi]
gi|313184615|gb|ADR49872.1| flagellin [Borrelia burgdorferi]
gi|313184617|gb|ADR49873.1| flagellin [Borrelia burgdorferi]
gi|313184619|gb|ADR49874.1| flagellin [Borrelia burgdorferi]
gi|313184621|gb|ADR49875.1| flagellin [Borrelia burgdorferi]
gi|313184623|gb|ADR49876.1| flagellin [Borrelia burgdorferi]
gi|313184625|gb|ADR49877.1| flagellin [Borrelia burgdorferi]
gi|313184627|gb|ADR49878.1| flagellin [Borrelia burgdorferi]
gi|313184629|gb|ADR49879.1| flagellin [Borrelia burgdorferi]
gi|313184631|gb|ADR49880.1| flagellin [Borrelia burgdorferi]
gi|313184633|gb|ADR49881.1| flagellin [Borrelia burgdorferi]
gi|313184635|gb|ADR49882.1| flagellin [Borrelia burgdorferi]
gi|313184637|gb|ADR49883.1| flagellin [Borrelia burgdorferi]
gi|313184639|gb|ADR49884.1| flagellin [Borrelia burgdorferi]
gi|313184641|gb|ADR49885.1| flagellin [Borrelia burgdorferi]
gi|313184643|gb|ADR49886.1| flagellin [Borrelia burgdorferi]
gi|313184645|gb|ADR49887.1| flagellin [Borrelia burgdorferi]
gi|313184647|gb|ADR49888.1| flagellin [Borrelia burgdorferi]
gi|313184649|gb|ADR49889.1| flagellin [Borrelia burgdorferi]
gi|313184651|gb|ADR49890.1| flagellin [Borrelia burgdorferi]
gi|313184653|gb|ADR49891.1| flagellin [Borrelia burgdorferi]
gi|313184655|gb|ADR49892.1| flagellin [Borrelia burgdorferi]
gi|313184657|gb|ADR49893.1| flagellin [Borrelia burgdorferi]
Length = 118
Score = 37.0 bits (83), Expect = 6.7, Method: Composition-based stats.
Identities = 5/64 (7%), Positives = 19/64 (29%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 112
Query: 394 DFIK 397
D +
Sbjct: 113 DSTE 116
>gi|126660202|ref|ZP_01731319.1| Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL
domains) with PAS/PAC sensor(s) [Cyanothece sp. CCY0110]
gi|126618504|gb|EAZ89256.1| Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL
domains) with PAS/PAC sensor(s) [Cyanothece sp. CCY0110]
Length = 964
Score = 37.0 bits (83), Expect = 6.7, Method: Composition-based stats.
Identities = 11/146 (7%), Positives = 34/146 (23%), Gaps = 1/146 (0%)
Query: 49 IAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSI 108
I + S L + + + + + + ++ ++ + + T+
Sbjct: 88 IQNALNSQEKYLKQARQNLST-LQTLQQQNSDIEEELTILQSLFTNYESAFKNTTERIID 146
Query: 109 QSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
E QL QL+ + + + F G
Sbjct: 147 NDEGYQLYQQLQTLINQFVNDRTLVRNRTIERLLLKAIAQQQKHFQTGKQGSPTDLRASL 206
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNH 194
+ + + ++
Sbjct: 207 EELQTALKNNPTNTPIQKLAQDYATT 232
>gi|58271306|ref|XP_572809.1| transporter [Cryptococcus neoformans var. neoformans JEC21]
gi|57229068|gb|AAW45502.1| transporter, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 1132
Score = 37.0 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 5/92 (5%)
Query: 36 RVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAG-----MSKAIDVMST 90
R AD+A +I ++S + + + G + + + S
Sbjct: 744 RNVPPADDAETAAIIMSLRSKLKTQTDEVTNLTNKIESLQKEAKGEKGQLIEEVESLSSQ 803
Query: 91 IKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
+ + T E ++ ++ E+ L+ D+
Sbjct: 804 VASLSTQLGESVKRTEELEGELNTLKQSYSDL 835
>gi|313184567|gb|ADR49848.1| flagellin [Borrelia burgdorferi]
Length = 118
Score = 37.0 bits (83), Expect = 6.9, Method: Composition-based stats.
Identities = 5/64 (7%), Positives = 19/64 (29%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPTPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 112
Query: 394 DFIK 397
D +
Sbjct: 113 DSTE 116
>gi|317153838|ref|YP_004121886.1| flagellar hook-associated protein FlgK [Desulfovibrio aespoeensis
Aspo-2]
gi|316944089|gb|ADU63140.1| flagellar hook-associated protein FlgK [Desulfovibrio aespoeensis
Aspo-2]
Length = 711
Score = 37.0 bits (83), Expect = 6.9, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 30/78 (38%)
Query: 372 IKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQL 431
+ G +G+ ++R +F + + + ++ ++ E + L Q
Sbjct: 632 LDYYNGLVGNVGTDTNRAKFNFNFYNTLATDLNERQQQVAGVNLDEEMSNLIRYQASYTA 691
Query: 432 AVQALSIVNNSTARILSL 449
A + ++ + ILSL
Sbjct: 692 AAKLITTADQMLQTILSL 709
>gi|51596076|ref|YP_070267.1| bacteriophage P2 tail protein gpT [Yersinia pseudotuberculosis IP
32953]
gi|51589358|emb|CAH20980.1| putative bacteriophage P2 tail protein gpT [Yersinia
pseudotuberculosis IP 32953]
Length = 808
Score = 37.0 bits (83), Expect = 6.9, Method: Composition-based stats.
Identities = 14/117 (11%), Positives = 42/117 (35%), Gaps = 5/117 (4%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVS-SGLRVSDAADNAAYWSIAQIMKSD-NGALS 61
I T ++ A + +++ +G + A +NAA +I ++ +
Sbjct: 35 IRTTQGSIKALEAQSAKIDGFRKASAQLAVTGQALKKAKENAAALAIQLRNTANPTAQQT 94
Query: 62 AVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQ 118
+ + +S + G+ ++ + ++ + A + S Q + ++
Sbjct: 95 RLMEGAKRAASDLQTKYNGLRQS---VQRQRDTLNASGISTRNLSSEQRRLRSSAAE 148
>gi|307171291|gb|EFN63216.1| hypothetical protein EAG_15201 [Camponotus floridanus]
Length = 564
Score = 37.0 bits (83), Expect = 7.0, Method: Composition-based stats.
Identities = 22/287 (7%), Positives = 52/287 (18%), Gaps = 16/287 (5%)
Query: 102 GTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKV 161
+S +I E L L D + + + G N G T +
Sbjct: 154 DQNSSTISEENDALSEALNDTVKRNKYYGTNTYEDRNGWVTLEAIPWSKSKISKWQANPS 213
Query: 162 QITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKK 221
+ + + N + + +
Sbjct: 214 TQRPWPEIKPWDKPSMKPWASDYTIRPTYENNKPWYDKSKPNWSDNNENPYQKPISRPSY 273
Query: 222 FKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIR 281
+ + + + PNT S + + +
Sbjct: 274 HSGDVAQKWPSEKPYWNKHETHRPNSDIITDDRPANFPNTWSRPQTTSYQLIDKYTEKDQ 333
Query: 282 MGNSDIWVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
G+ W ++K T + + S
Sbjct: 334 SGDGSEWHDYSSKYDQNRPTIITERPNFSHYQYV------NNHPPNHPASGDGQWILLST 387
Query: 342 VTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSR 388
+ + ++ G+ +R
Sbjct: 388 NRGYSKSRQRSIKIDTVNTP--------EALQAVNT--TNRGNKQNR 424
>gi|284051299|ref|ZP_06381509.1| RND family efflux transporter MFP subunit [Arthrospira platensis
str. Paraca]
Length = 494
Score = 37.0 bits (83), Expect = 7.0, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 19/56 (33%)
Query: 356 NEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ + + I + ++A IGS + + E I+ V R+
Sbjct: 250 TAEEGVRVAEANISSARATISSARANIGSAQANVESAESNIRSAEAEVRSAQARVR 305
>gi|328545489|ref|YP_004305598.1| flagellar hook-associated protein L [polymorphum gilvum
SL003B-26A1]
gi|326415230|gb|ADZ72293.1| Flagellar hook-associated protein L [Polymorphum gilvum
SL003B-26A1]
Length = 349
Score = 36.6 bits (82), Expect = 7.2, Method: Composition-based stats.
Identities = 24/202 (11%), Positives = 61/202 (30%)
Query: 4 ILTNHSAMSASQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAV 63
I T + ++ L + NL +Q +S+G + D + A ++S++ L+A+
Sbjct: 6 ISTFTLSDTSRGLLMKQSANLARLQVEMSTGRKADIGLDLGSRTGEAIALRSEHTRLNAI 65
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIA 123
D L +S++D+ +A + + + + + + + E L
Sbjct: 66 IDTNALAASRLDVTQAALGDVLGTAQSFLATLVGVRDSDGSASVAKGEGQGGLDLLISRL 125
Query: 124 RGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDG 183
+ + + + + + + + D V S+ D
Sbjct: 126 NTQVNGNYLFAGLNTDVAPMANYFETPAASNKAAVDAAFVARFGFSQDDPAVSTISAADM 185
Query: 184 TERYGLLDRNHKIKVEPQVLKD 205
+
Sbjct: 186 DDFLTNFYMPLFDDPAWGADWS 207
>gi|110801433|ref|YP_695416.1| KID repeat-containing protein [Clostridium perfringens ATCC 13124]
gi|110676080|gb|ABG85067.1| KID repeat family protein [Clostridium perfringens ATCC 13124]
Length = 1702
Score = 36.6 bits (82), Expect = 7.2, Method: Composition-based stats.
Identities = 45/403 (11%), Positives = 93/403 (23%), Gaps = 24/403 (5%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSA----VSDAIGLGS- 71
L N + +SS A DNA K D+ + +++ I
Sbjct: 600 LSTQNNTITEHSKELSSQKASLTALDNA------LKFKVDSQTFNQSTTTINNNINRAKE 653
Query: 72 ----SKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSS 127
S A + +++A++ N V + + SEI L+ Q+ S
Sbjct: 654 EAINSSNSHADSKVNEALNNAKAFVNSEITNVNTHLNKNT--SEINILKGQIESKVSQSD 711
Query: 128 FNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERY 187
+ G + +K S + Y T+ D + +
Sbjct: 712 IDKSIQNIEFGGRNLFLKSKGPFKSSNEYVGISITSVVEKYLNKKITISADVKANKVGKI 771
Query: 188 GLL----DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAK 243
+ + K+ + + T +
Sbjct: 772 RFYSLGGYSVGFWVERDVTTEWTRIKATGKFTLNDEKQKWCDLSFYGTYGSGLFTEVRNV 831
Query: 244 GIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGY 303
I + A +T + +T + + + S
Sbjct: 832 KIELGELASDYTEAPEDTDKLIIDNIKTVTDKISTVESKLTQENNSIKASVQDLNSTTQS 891
Query: 304 TNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEE 363
+ V+ + + + I I E+ +++
Sbjct: 892 ITTNVSNINRDLISKINSNLAVAKNFATDIAIAKANLAREQAIASADGKITEEERKRIQQ 951
Query: 364 MVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKG 406
+DT I A A + K
Sbjct: 952 AQENLDTAIARADKAKQD---AINAASTDATNKANNALNSAKA 991
>gi|241565984|ref|XP_002402054.1| RNAse H, putative [Ixodes scapularis]
gi|215499945|gb|EEC09439.1| RNAse H, putative [Ixodes scapularis]
Length = 1603
Score = 36.6 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 13/119 (10%), Positives = 34/119 (28%), Gaps = 15/119 (12%)
Query: 15 QKLRDINYNLEVVQDRVSS------GLRVSDAA--DNAAYWSIAQIMKSDNGALSAVSDA 66
Q L L+ +++S L+ + ++ ++ A + + + L
Sbjct: 282 QNLTSTAAELQKTSAQLASLSKEVADLKATTSSLQESVASAPQIKGLPNAVTDLKQNVAN 341
Query: 67 IGLGSSKVDIAKAGMSKAIDVMSTI-------KNKITAGVERGTDSKSIQSEITQLQSQ 118
IG S ++ + + T+ K + + + Q
Sbjct: 342 IGSQVSSLEQGVEALKEQHTATQTMQKDLDHLKELVQRVTNATSSENQSSAHSLDDLKQ 400
>gi|114762921|ref|ZP_01442353.1| methyl-accepting chemotaxis protein McpH [Pelagibaca bermudensis
HTCC2601]
gi|114544531|gb|EAU47538.1| methyl-accepting chemotaxis protein McpH [Roseovarius sp. HTCC2601]
Length = 455
Score = 36.6 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 8/99 (8%), Positives = 24/99 (24%)
Query: 42 DNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVER 101
D A + ++ AI G + + ++ A
Sbjct: 116 DEAGDVVRITKIATEITGQRQAIRAIADGLEALSSGDLSHRVTLTAQDRLRELADAFNAA 175
Query: 102 GTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGS 140
+ ++ + ++ +A N + +
Sbjct: 176 AEHISGLIRQVQSVSGEIDSVASEIGDNSDELSQRTETQ 214
>gi|21758654|dbj|BAC05347.1| unnamed protein product [Homo sapiens]
Length = 424
Score = 36.6 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 36/401 (8%), Positives = 101/401 (25%), Gaps = 10/401 (2%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVD 75
+L+ LE ++ + S + +D A +A M+ A DA+ ++
Sbjct: 11 QLKSAQSELEQTRNTLKS----MEGSDGHA-MKVAMGMQKQITAKRGQIDALQSKIQFLE 65
Query: 76 IAKAGMSKAIDVMSTIKNKITAGVER-GTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
A +K + K+K++ + T+ + E+ L+SQ R + +
Sbjct: 66 EAMTNANKEKHFLKEEKSKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVTNMEVALD 125
Query: 135 RTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNH 194
+ L + + + + T + + +
Sbjct: 126 KASLQFAECQDIIQRQEQESVRLKLQHTLDIKELQGPGYTSNSSLKPRLLQPASVTRSHS 185
Query: 195 KIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPA 254
+ + A+ L N +
Sbjct: 186 NVPSSQSTASFLSHHSTKANTLKEDPTRDLKQLLQELRSVINEEPAVSLSKTEEDGRTSL 245
Query: 255 APAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAKVGNT 314
+ S S + + +S +++ S + G
Sbjct: 246 GALEDRVRDCITESSLRSDMCHRSNNSLRDSTEGSKSSETLSREPVTLHAGDREDPSGCF 305
Query: 315 HYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKC 374
+ + +S + +L + + + + + D+
Sbjct: 306 TFTSAASPSVKNSASRSFNSSPKKSPVHSLLTSSVEGSIGSTSQYRSAKPIHSSDSVKDS 365
Query: 375 ATAAAGKIGSI----SSRIHLQEDFIKLMRDAVEKGVGRLV 411
+ G +R+ + ++ ++ + +
Sbjct: 366 QSPPIETTGKTCRKLQNRLESLQTLVEDLQLKNQAMSSMIR 406
>gi|1150642|emb|CAA90950.1| fliC [Salmonella enterica subsp. enterica serovar Typhimurium]
Length = 20
Score = 36.6 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 6/20 (30%), Positives = 8/20 (40%)
Query: 432 AVQALSIVNNSTARILSLFR 451
L+ N +LSL R
Sbjct: 1 GTSVLAQANQVPQNVLSLLR 20
>gi|320654167|gb|EFX22235.1| macrolide transporter subunit MacA [Escherichia coli O55:H7 str.
3256-97 TW 07815]
Length = 371
Score = 36.6 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 10/92 (10%)
Query: 358 KLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMAS 417
+ +DT +IG+I ++I + + + ++ R+V A MA
Sbjct: 136 AQTQAVSLQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLD--YTRIV-APMAG 192
Query: 418 ESTRLSALQTQQQLAVQALSIVNNSTARILSL 449
E T+++ LQ ++ + IL+L
Sbjct: 193 EVTQITTLQ-----GQTVIA-AQQAP-NILTL 217
>gi|218548401|ref|YP_002382192.1| macrolide transporter subunit MacA [Escherichia fergusonii ATCC
35469]
gi|218355942|emb|CAQ88557.1| macrolide transporter subunit, membrane fusion protein (MFP)
component [Escherichia fergusonii ATCC 35469]
gi|324113826|gb|EGC07801.1| efflux transporter [Escherichia fergusonii B253]
gi|325496822|gb|EGC94681.1| macrolide transporter subunit MacA [Escherichia fergusonii ECD227]
Length = 371
Score = 36.6 bits (82), Expect = 7.6, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 367 FIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRLSALQ 426
+DT + +IG+I ++I + + + ++ R+V A MA E T+++ LQ
Sbjct: 145 DLDTAVTELAVKQAQIGTIDAQIKRNQASLDTAKTNLD--YTRIV-APMAGEVTQITTLQ 201
Query: 427 TQQQLAVQALSIVNNSTARILSL 449
++ + IL+L
Sbjct: 202 -----GQTVIA-AQQAP-NILTL 217
>gi|298356986|emb|CBM40874.1| flagellin [Ralstonia pickettii]
Length = 151
Score = 36.6 bits (82), Expect = 8.0, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 33/103 (32%)
Query: 314 THYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIK 373
+ + ++T + S L+ + + + IDT +
Sbjct: 49 NKLFDGSVTSTTFQYGQNAATDVTSVSNANLSTFGTLSGTSVTSTANATAAQAAIDTDLT 108
Query: 374 CATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMA 416
AA +G+ S ++ + + A+ L+D D A
Sbjct: 109 NLKAARANLGAQQSGLNSTINTLTSNNTALSAAKSSLIDTDCA 151
>gi|313184523|gb|ADR49826.1| flagellin [Borrelia burgdorferi]
gi|313184525|gb|ADR49827.1| flagellin [Borrelia burgdorferi]
gi|313184527|gb|ADR49828.1| flagellin [Borrelia burgdorferi]
gi|313184529|gb|ADR49829.1| flagellin [Borrelia burgdorferi]
gi|313184531|gb|ADR49830.1| flagellin [Borrelia burgdorferi]
gi|313184533|gb|ADR49831.1| flagellin [Borrelia burgdorferi]
gi|313184535|gb|ADR49832.1| flagellin [Borrelia burgdorferi]
gi|313184537|gb|ADR49833.1| flagellin [Borrelia burgdorferi]
gi|313184539|gb|ADR49834.1| flagellin [Borrelia burgdorferi]
gi|313184541|gb|ADR49835.1| flagellin [Borrelia burgdorferi]
gi|313184543|gb|ADR49836.1| flagellin [Borrelia burgdorferi]
gi|313184545|gb|ADR49837.1| flagellin [Borrelia burgdorferi]
gi|313184547|gb|ADR49838.1| flagellin [Borrelia burgdorferi]
gi|313184579|gb|ADR49854.1| flagellin [Borrelia burgdorferi]
gi|313184581|gb|ADR49855.1| flagellin [Borrelia burgdorferi]
gi|313184583|gb|ADR49856.1| flagellin [Borrelia burgdorferi]
gi|313184585|gb|ADR49857.1| flagellin [Borrelia burgdorferi]
gi|313184587|gb|ADR49858.1| flagellin [Borrelia burgdorferi]
Length = 118
Score = 36.6 bits (82), Expect = 8.2, Method: Composition-based stats.
Identities = 4/64 (6%), Positives = 19/64 (29%)
Query: 334 EIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKIGSISSRIHLQE 393
+ + + ++ I+ I+ + +G+ +R+ +
Sbjct: 53 GAQQPAPATAPSQGGVNSPVNVTTTVDANTSLAKIENAIRMISDQRANLGAFQNRLESIK 112
Query: 394 DFIK 397
+ +
Sbjct: 113 NSTE 116
>gi|99030790|gb|ABF61481.1| spike protein [Infectious bronchitis virus]
Length = 1170
Score = 36.6 bits (82), Expect = 8.2, Method: Composition-based stats.
Identities = 36/346 (10%), Positives = 83/346 (23%), Gaps = 11/346 (3%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
L L+ Q++++ A+ N A + ++ + AL + D I S +
Sbjct: 788 NHLGITQTVLQKNQEQIA-------ASFNKAMAHMQNGFRATSSALQQIQDVINKQGSVL 840
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
A ++K +S++ I + ++ + + IT S L +A
Sbjct: 841 QDAMNSLNKNFGALSSVIQDIYSRLDAIEANVQVDRLITGRLSSLSVLASAKQAEYAKVS 900
Query: 135 R----TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+ + ++S F + I + ++
Sbjct: 901 QQRELAKQKINECVKSQSTRLGFCGAGRHVLTIPQNAPNGIVLLHFTYTPETYKNVTAVV 960
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
K + T A
Sbjct: 961 GFCIKPDNGSEYAIVPVSGRGVFIQENGTYYITARDMYMPGAITGGDVVTLTSCQANYVS 1020
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
+ S + T + + D + +IT D +
Sbjct: 1021 LNKTVITTFVENDDFNFHDELSKWWNETKHDLPDFDQFNYTIPVLNITYDIDNIEQVIKG 1080
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ ++ ++T S K + + + I
Sbjct: 1081 LNDSLIDLETLSILKTYIKWPWYVWLAIAFLTIIFILILVWIFFMT 1126
>gi|313229721|emb|CBY18536.1| unnamed protein product [Oikopleura dioica]
Length = 1991
Score = 36.6 bits (82), Expect = 8.3, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDI 76
+ N + V Q+++S R D D+ A W+I+ MK D L A + +S ++
Sbjct: 1896 MLKNNDEIFVDQEKLSQQKR--DPVDDNALWNIS-KMKRDMRQLQAQLRELDDRNSTLEN 1952
Query: 77 AKAGMSKAIDVMSTIKNKI 95
++ + D++ +
Sbjct: 1953 KQSRALEQTDILEGTLEQS 1971
>gi|50761088|ref|XP_418228.1| PREDICTED: similar to preproMP73 [Gallus gallus]
Length = 216
Score = 36.6 bits (82), Expect = 8.3, Method: Composition-based stats.
Identities = 13/112 (11%), Positives = 28/112 (25%), Gaps = 13/112 (11%)
Query: 16 KLRDINYNLEVVQDRVSSGLRVSDAADNAAYW-SIAQIMKSDNGALSA-----VSDAIGL 69
LR + +++SSGLR + AA + ++ + L L
Sbjct: 84 ALRRELSRVRKDGEKLSSGLR--SCRERAARMETNITALQDEVRGLRRERAELSRRNAAL 141
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRD 121
A+ + + + E + +
Sbjct: 142 QEELAQGAERALG-----LQRRLEETAEQRRALRARGERCEERQRDLEAMLR 188
>gi|261340076|ref|ZP_05967934.1| putative bacteriophage P2 tail protein gpT [Enterobacter
cancerogenus ATCC 35316]
gi|288318003|gb|EFC56941.1| putative bacteriophage P2 tail protein gpT [Enterobacter
cancerogenus ATCC 35316]
Length = 815
Score = 36.6 bits (82), Expect = 8.4, Method: Composition-based stats.
Identities = 16/195 (8%), Positives = 55/195 (28%), Gaps = 19/195 (9%)
Query: 10 AMSASQKLRDINYNLE---VVQDRVS-SGLRVSDAADNAAYWSIAQIMK-----SDNGAL 60
+ + + L ++ +++ +G ++ A AA ++ + A+
Sbjct: 38 SQNTLRDLNAQASRIDGFRKASAQLAVTGQSLNKAKQEAAALAVQFKNTENPTNAQVRAM 97
Query: 61 SAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR 120
A + + + G+ ++ + + ++ + + +L+S +
Sbjct: 98 EAAKKSAAD----LQLKYNGLRQS---VQRQRTELAQAGINTRTLSADE---RRLKSSIS 147
Query: 121 DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSS 180
+ + + + S KS S + G + + + S
Sbjct: 148 ETTAQLNRQRDALASVSQQQARLSAVKSRYESGQKLAAGARNAGMVGVGVATAGLYGASR 207
Query: 181 TDGTERYGLLDRNHK 195
+
Sbjct: 208 FIAPGIGFDKQMSGT 222
>gi|58294348|gb|AAW70092.1| NodTch [Rhizobium etli]
Length = 479
Score = 36.6 bits (82), Expect = 8.4, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 29/80 (36%), Gaps = 9/80 (11%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
V ++ + A + ++ +++ ++ ++L + + G L+D
Sbjct: 374 TAVEQVENALAAVRRDARTVAALQAQVKTTQETLELSTASYKDGASSLLDV--------- 424
Query: 423 SALQTQQQLAVQALSIVNNS 442
Q Q LA +L+
Sbjct: 425 LDAQRQVSLAQASLAQAVQQ 444
>gi|317030138|ref|XP_001391976.2| hypothetical protein ANI_1_2100064 [Aspergillus niger CBS 513.88]
Length = 787
Score = 36.6 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 32/379 (8%), Positives = 90/379 (23%), Gaps = 12/379 (3%)
Query: 39 DAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAG 98
A D+ S ++ + + L ++ D A S+ + + ++ + A
Sbjct: 88 RAEDDPLIRSPSRGQRRRSTPLPRSRRSMD----APDAASTAFSEHVVQFTPLRQLLDAR 143
Query: 99 VERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDN 158
+R + EI L+ + R+ A+ D + K
Sbjct: 144 TKRRIRRIGLSDEINHLEREKRESAQYEKTLQSLLRERDSLKNELDSVKRNQDVSKSLAT 203
Query: 159 GKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTIS 218
+ + + + + + + V A +
Sbjct: 204 SEETTWLSPQSMIEQVLSENVRLREQLSFPSPGATTDHDTISNSEGETMVINESAWDCDT 263
Query: 219 TKKFKLATTSGAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASAT 278
+ + + P+ + A+A
Sbjct: 264 MLISNSPDIRALDARLSVPDNISLLSQGHANTDASTQASIPDHRQEAEIIALSADLAAAR 323
Query: 279 YIRMGNSDI--WVRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEID 336
+ D A+ + +S + T++ S +
Sbjct: 324 KEKRDLFDACRARVASFGGTAIEGLLRQSSPPPDFLDQVLPTLTQTLRRASDAAQALDNV 383
Query: 337 SGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQI------KCATAAAGKIGSISSRIH 390
+A + ++ + + +G++ R+
Sbjct: 384 KEELSGLGFPGNNAEEIISTMRDHFRAARLQLERAVPGETANASLSDGKATLGALVKRVE 443
Query: 391 LQEDFIKLMRDAVEKGVGR 409
+ + ++ ++ VGR
Sbjct: 444 VLVKSLGDEQERLQGSVGR 462
>gi|307708847|ref|ZP_07645307.1| choline binding protein J [Streptococcus mitis SK564]
gi|307620183|gb|EFN99299.1| choline binding protein J [Streptococcus mitis SK564]
Length = 668
Score = 36.6 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 32/353 (9%), Positives = 79/353 (22%), Gaps = 26/353 (7%)
Query: 12 SASQKLRDINYNLEVVQDRVSSGLRVSDAADN-----AAYWSIAQIMKSDNGALSAVSD- 65
A + L+ N L+ Q+R ++ A +N A + + K++
Sbjct: 283 VAEKHLQLANLALKNAQERKATAE---TAVENFSRSQAEKATALETAKAELATAKTAQKD 339
Query: 66 ---AIGLGSSKVDIAK---AGMSKAIDVMSTIKNKITAGV-----------ERGTDSKSI 108
A+ +K+ + + + K+K+ + +
Sbjct: 340 AETALTNAQAKLQAEENKLTALQAEQAKLHEEKDKLVSDAKAIATELSAYLNADKNLADA 399
Query: 109 QSEITQLQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDY 168
Q+++ L+++L + + + I +
Sbjct: 400 QAKVADLEAKLTQEKSAAKLAQDKLDAVTAKLKAEQAKLAEIQEEFDKLVKAESKDDYNL 459
Query: 169 YLDPETVLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTS 228
L L + + ++
Sbjct: 460 SDWYLEYLAGKQAKKKTDTELKKVEDSQAGNWIESSGRWWYKHADGSYTTNGWEQIKDKW 519
Query: 229 GAWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIW 288
+ A K ++ + A + + + ++ W
Sbjct: 520 YYFDHAGWMKTGWVKTGSSWYYLNNSGSMATGWVKDNGTWYYLNKSGLMATGWVKDNGTW 579
Query: 289 VRATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSM 341
SI + N T + N+ S L K
Sbjct: 580 YYLNKSGSIATGWIKDNGTWYYLNNSGSMATGWVKDNGSWYYLDKSGAMTTGW 632
>gi|218202501|gb|EEC84928.1| hypothetical protein OsI_32136 [Oryza sativa Indica Group]
Length = 1764
Score = 36.6 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 27/290 (9%), Positives = 68/290 (23%), Gaps = 24/290 (8%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKS----------DNGALSAV 63
Q I L R++ G S ++A+ + M+S G + +
Sbjct: 1348 LQSQNQITSFLSQSDGRLADG-NDSKLGEDASR----ERMRSSGEDLGLAGAQPGGVQSN 1402
Query: 64 SDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLR--- 120
+ + +++ + K ++ST + Q+ +
Sbjct: 1403 TQQLEDARNQLQTDASNSVKPSQLISTPSAEAVQPSSTAMAGGDNQNTAWAQLASTSGQS 1462
Query: 121 --DIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLD 178
A ++ ++G + + + P V
Sbjct: 1463 QPQAAGNMTWGATLQGNANMGWGMVGQNNMNMSWGGTAQSATGYNMGLAMQAQPNAVPNM 1522
Query: 179 SSTDGT----ERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKA 234
+ + + + + + + + G +
Sbjct: 1523 GWVTPNPGNTNMNMMWATQGQGTPNAAAMVGTQMQGVAMAPWGAIAQGNTNSYPGWGGQV 1582
Query: 235 ANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGN 284
N + G P P+ + SPS + + N
Sbjct: 1583 GNMNQNVGWGAPMQVNPGPSTGNGTGQDNNNMNWNSPSGNPNWNNQQRDN 1632
>gi|288940811|ref|YP_003443051.1| PAS/PAC and GAF sensor-containing diguanylate
cyclase/phosphodiesterase [Allochromatium vinosum DSM
180]
gi|288896183|gb|ADC62019.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(s) [Allochromatium vinosum DSM 180]
Length = 1147
Score = 36.6 bits (82), Expect = 8.8, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 23/65 (35%), Gaps = 11/65 (16%)
Query: 384 SISSRIHLQ--EDFIKLMRDAVEKGVGRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
++ R+ Q D+++ AD+ +E R QT Q A ++
Sbjct: 234 ALQERLDTQSCIDYLEQAIHTA---------ADITAEELRFREFQTIAQAASTMIAQRRQ 284
Query: 442 STARI 446
+ +
Sbjct: 285 AEQAL 289
>gi|99030832|gb|ABF61518.1| spike protein [Infectious bronchitis virus]
Length = 1174
Score = 36.6 bits (82), Expect = 8.8, Method: Composition-based stats.
Identities = 35/346 (10%), Positives = 82/346 (23%), Gaps = 11/346 (3%)
Query: 15 QKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKV 74
L L+ Q++++ A+ N A + ++ + AL + D I S +
Sbjct: 792 NHLGITQTVLQKNQEQIA-------ASFNKAMLHMQDGFRATSSALQQIQDVINKQGSVL 844
Query: 75 DIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWL 134
A ++K +S++ I + ++ + + IT S L +A
Sbjct: 845 QDAMNALNKNFGAVSSVIQDIYSRLDTIEANVQVNRLITGRLSSLSVLASAKQAEYAKVS 904
Query: 135 R----TDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLL 190
+ + ++S F + I + ++
Sbjct: 905 QQRELAKQKINECVKSQSTRLGFCGAGKHVLTIPQNAPNGIVLLHFTYTPETYKNVTAVV 964
Query: 191 DRNHKIKVEPQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATIPV 250
K + T A
Sbjct: 965 GFCIKPDNGSEYAIVPVSGRGIFIQENDTYYITARDMYMPRAITGGDVVMLTSCQANYVS 1024
Query: 251 PLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITSDPGYTNSTVAK 310
+ S + T + + D + +IT D +
Sbjct: 1025 LNRTVITTFVENDDFNFDDELSKWWNRTKSELPDFDQFNYTIPVLNITYDIDKIEEVING 1084
Query: 311 VGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYN 356
+ ++ ++ S K + + + I
Sbjct: 1085 LNDSLIDLEVLSILKTYIKWPWYVWLAIAFLTIIFILILVWIFFMT 1130
>gi|254167614|ref|ZP_04874465.1| CUB domain protein [Aciduliprofundum boonei T469]
gi|289596900|ref|YP_003483596.1| CUB protein [Aciduliprofundum boonei T469]
gi|197623423|gb|EDY35987.1| CUB domain protein [Aciduliprofundum boonei T469]
gi|289534687|gb|ADD09034.1| CUB protein [Aciduliprofundum boonei T469]
Length = 1621
Score = 36.6 bits (82), Expect = 8.9, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 53/149 (35%), Gaps = 12/149 (8%)
Query: 14 SQKLRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSK 73
+ IN + +Q +V++ A ++ D +++ + I S+
Sbjct: 1421 LNAINAINSEISNLQSQVTTMKDEISAL-----QGKISTIQGDISTINSDINNI---KSQ 1472
Query: 74 VDIAKAGMSKAIDVMS---TIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNG 130
+D + ++ + + T NK + +K Q+ I LQSQ+ D+ ++
Sbjct: 1473 LDTLNSRINTLQNDLKENVTALNKAIEELNTTLVNKIEQN-INNLQSQINDLKNQANDLQ 1531
Query: 131 ENWLRTDLGSSTASIAKSVIGSFIRDDNG 159
N + + S + I N
Sbjct: 1532 SNIQQINTNISDIQSKNNEQDKAISSSNN 1560
>gi|326319103|ref|YP_004236775.1| flagellar hook-associated protein FlgK [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323375939|gb|ADX48208.1| flagellar hook-associated protein FlgK [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 643
Score = 36.6 bits (82), Expect = 9.1, Method: Composition-based stats.
Identities = 36/334 (10%), Positives = 89/334 (26%), Gaps = 7/334 (2%)
Query: 115 LQSQLRDIARGSSFNGENWLRTDLGSSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPET 174
+Q + + L G ++ S+ G G V + + +
Sbjct: 299 RMAQAIGMTMNAQHKLGLTLDGQAGKDLFTVPASMPGYTSGTAVGNVSFSDATKFAASDY 358
Query: 175 VLLDSSTDGTERYGLLDRNHKIKVEPQVLKDIDVSVYDASGTISTK-----KFKLATTSG 229
+ ++ + L D + L + + T + F+ +++
Sbjct: 359 EVRFTTPPAGQVVRLSDGKATAFTDLANLAGQQIDGLTFNMTTAGAAGERVMFRPFSSAA 418
Query: 230 AWLKAANATFDQAKGIATIPVPLPAAPAAPNTTSGTSGSKSPSVAASATYIRMGNSDIWV 289
++A + + + + A S + SP
Sbjct: 419 RDIEAKVLSPRDLAAASPVNAAMGTANNGSLQLSSIKATASPYTPPPTPGGVTLTFTAGP 478
Query: 290 RATTKNSITSDPGYTNSTVAKVGNTHYYVDTESTTLDSRKDLPKEIDSGYSMVTLNITRH 349
AT + ++ P + +A +D TL + G ++ +
Sbjct: 479 PATYGVTGSTSPASGTTGLAYTPGQPITIDGWEITLKGTPGTGDTVKVGNALDAQYGDAY 538
Query: 350 ANTDAYNEKLAMEEMVSFIDTQI--KCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGV 407
+ V D ++G+ D + +E+
Sbjct: 539 KRNAGNASAIDALGDVKMFDDATMSDGYAGLMAQVGTRMQNAKYASDVSSTISTNLERDR 598
Query: 408 GRLVDADMASESTRLSALQTQQQLAVQALSIVNN 441
+ ++ E+ +L Q Q + + L I +
Sbjct: 599 SAVAGVNLDEEAAKLIQYQQAYQASAKVLQIAQS 632
>gi|224371440|ref|YP_002605604.1| methyl-accepting chemotaxis protein [Desulfobacterium autotrophicum
HRM2]
gi|223694157|gb|ACN17440.1| methyl-accepting chemotaxis protein [Desulfobacterium autotrophicum
HRM2]
Length = 548
Score = 36.6 bits (82), Expect = 9.1, Method: Composition-based stats.
Identities = 11/116 (9%), Positives = 36/116 (31%), Gaps = 7/116 (6%)
Query: 15 QKLRDINYNLEVVQDRV-----SSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGL 69
Q L + L + +++ + + A +A ++ M S A + I +
Sbjct: 264 QNLTASSTELSAISEQIFTNSDQTAKNSNSVA--SAAEEMSTNMNSVAAATEQATANIQM 321
Query: 70 GSSKVDIAKAGMSKAIDVMSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARG 125
+ + A +++ V+ ++ + +++ +
Sbjct: 322 VVAAAEEMTATINEISKNTIKGSETTIQAVQTAKQVSEQVDKLGKAANEISQVTET 377
>gi|86359005|ref|YP_470897.1| nodulation protein (outer membrane efflux protein) [Rhizobium etli
CFN 42]
gi|86283107|gb|ABC92170.1| nodulation protein (outer membrane efflux protein) [Rhizobium etli
CFN 42]
Length = 478
Score = 36.6 bits (82), Expect = 9.1, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 29/80 (36%), Gaps = 9/80 (11%)
Query: 363 EMVSFIDTQIKCATAAAGKIGSISSRIHLQEDFIKLMRDAVEKGVGRLVDADMASESTRL 422
V ++ + A + ++ +++ ++ ++L + + G L+D
Sbjct: 373 TAVEQVENALAAVRRDARTVAALQAQVKTTQETLELSTASYKDGASSLLDV--------- 423
Query: 423 SALQTQQQLAVQALSIVNNS 442
Q Q LA +L+
Sbjct: 424 LDAQRQVSLAQASLAQAVQQ 443
>gi|46394874|gb|AAS91593.1| lateral flagellin [Vibrio parahaemolyticus]
gi|46394876|gb|AAS91594.1| lateral flagellin [Vibrio parahaemolyticus]
gi|46394880|gb|AAS91596.1| lateral flagellin [Vibrio parahaemolyticus]
Length = 44
Score = 36.3 bits (81), Expect = 9.6, Method: Composition-based stats.
Identities = 6/44 (13%), Positives = 17/44 (38%)
Query: 53 MKSDNGALSAVSDAIGLGSSKVDIAKAGMSKAIDVMSTIKNKIT 96
+++ +S G S + A+ M + ++ + + T
Sbjct: 1 LEAQTRGMSVAMRNAQDGISMMQTAEGAMEEMTNITYRMNDLAT 44
>gi|313241800|emb|CBY34014.1| unnamed protein product [Oikopleura dioica]
Length = 2635
Score = 36.3 bits (81), Expect = 9.8, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 45/113 (39%), Gaps = 11/113 (9%)
Query: 17 LRDINYNLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDI 76
+ N + V Q+++S R D D+ A W+I+ MK D L A + +S ++
Sbjct: 2214 MLKNNDEIFVDQEKLSQQKR--DPVDDNALWNIS-KMKRDMRQLQAQLRELDDRNSTLEN 2270
Query: 77 AKAGMSKAIDVM-------STIKNKITAGVERGTDSKSIQSEITQLQSQLRDI 122
++ + D++ S ++ + ++ + + Q+ +
Sbjct: 2271 KQSRALEQTDILEGHLNRASREQSDLLNMSISSSNRS-LDRINESMTDQMIRV 2322
>gi|326382391|ref|ZP_08204083.1| MMPL domain-containing protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326199121|gb|EGD56303.1| MMPL domain-containing protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 1026
Score = 36.3 bits (81), Expect = 9.9, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 29/92 (31%), Gaps = 2/92 (2%)
Query: 323 TTLDSRKDLPKEIDSGYSMVTLNITRHANTDAYNEKLAMEEMVSFIDTQIKCATAAAGKI 382
T + L G + ++ ++ +D+ ++ +
Sbjct: 630 TQTSDIRALADNQSLGRFADFATQLGGVEGPGTADLAQLQSSLNVLDSALQTINGQ--DL 687
Query: 383 GSISSRIHLQEDFIKLMRDAVEKGVGRLVDAD 414
GS S++ + + GV LVD++
Sbjct: 688 GSRLSQLQTGVRALADGARQLSGGVSALVDSN 719
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.312 0.0982 0.265
Lambda K H
0.267 0.0301 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,704,540,626
Number of Sequences: 14124377
Number of extensions: 152673014
Number of successful extensions: 509432
Number of sequences better than 10.0: 8012
Number of HSP's better than 10.0 without gapping: 5586
Number of HSP's successfully gapped in prelim test: 2426
Number of HSP's that attempted gapping in prelim test: 478555
Number of HSP's gapped (non-prelim): 24323
length of query: 452
length of database: 4,842,793,630
effective HSP length: 142
effective length of query: 310
effective length of database: 2,837,132,096
effective search space: 879510949760
effective search space used: 879510949760
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.3 bits)
S2: 82 (36.6 bits)