RPSBLAST alignment of GI: 254780531 and protein with PDBid: 3k8w
>3k8w_A Flagellin homolog; flagellum, structural protein, bacterial flagellu; 1.70A {Sphingomonas SP} PDB: 2zbi_A 3k8v_A Length = 326
Score = 71.3 bits (173), Expect = 4e-13
Identities = 51/281 (18%), Positives = 107/281 (38%), Gaps = 9/281 (3%)
Query: 23 NLEVVQDRVSSGLRVSDAADNAAYWSIAQIMKSDNGALSAVSDAIGLGSSKVDIAKAGMS 82
+L R+SSGLR++ A D+AA +I+ M + L+ G S A+ +
Sbjct: 4 SLSTSLQRLSSGLRINSAKDDAAGLAISDRMTAQIKGLTQAQRNANDGISLAQTAEGALG 63
Query: 83 KAIDV---MSTIKNKITAGVERGTDSKSIQSEITQLQSQLRDIARGSSFNGENWLRTDLG 139
+ + + + + + G TD ++Q+E+TQLQS+++ +A +SFNG+ L
Sbjct: 64 EISNNLQRIRELAVQASNGTNTQTDRDALQAEVTQLQSEIQRVAEQTSFNGQKLLDGSFN 123
Query: 140 SSTASIAKSVIGSFIRDDNGKVQITTIDYYLDPETVLLDSSTDGTERYGLLDRNHKIKVE 199
I + + Q ++ L T +D++ + + I
Sbjct: 124 GVQFQIGANAGETIGVSKIMNAQTASLGGSLTRTTSTIDATDLTKYDTAMAAGDLTINGV 183
Query: 200 PQVLKDIDVSVYDASGTISTKKFKLATTSGAWLKAANATFDQAKGIATI-PVPLPAAPAA 258
D + + + ++ A + A++D+ G T+ A A
Sbjct: 184 DVGKIDAASTAQERAAQLTE-----AINRVSSQTNVGASYDKTTGQVTLTSNAAIAVAGA 238
Query: 259 PNTTSGTSGSKSPSVAASATYIRMGNSDIWVRATTKNSITS 299
N + + + + + T + + + + +IT
Sbjct: 239 ANDATVAGWANNATTGTATTTTGINSLTVSSFTNAQQTITQ 279