HHsearch alignment for GI: 254780532 and conserved domain: cd08010
>cd08010 yceG_like proteins similar to Escherichia coli yceG. The gene product of Escherichia coli yceG has been erroneously annotated as an aminodeoxychorismate lyase. Its overexpression has been reported to cause abnormal biofilm architecture, and it has been reported to be part of a putative five-gene operon. It might function as a periplasmic solute-binding protein. The family also includes Streptomyces caeruleus NovB, an uncharacterized member of the novobiocin biosynthetic gene cluster.
Probab=100.00 E-value=0 Score=597.00 Aligned_cols=231 Identities=42% Similarity=0.744 Sum_probs=215.2
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC--------------CCCCCCCCCC
Q ss_conf 25720440678758999998610243332101111034899999862073111344--------------3668810000
Q gi|254780532|r 78 LKTGEYEIEKGSSMSQIAEKIMYGKVLMHSISFPEGFTVKQMARRLKDNPLLVGEL--------------PLELPLEGTL 143 (325)
Q Consensus 78 ikaG~Y~i~~~~s~~~il~~L~~G~~~~~~iTI~EG~t~~ei~~~L~~~~~l~~~~--------------~~~~~lEG~l 143 (325)
T Consensus 1 ikaG~Y~l~~~~s~~~il~~L~~g~~~~~~vTIpEG~t~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lEG~L 80 (245)
T cd08010 1 LKAGEYELSPGMSLAEILERLTSGKSAQVKVTIPEGYTLKQIAKALSKAGGLSDAEFLAALKDPAFILLGDPKYPLEGYL 80 (245)
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHCCCCCCCCCEEE
T ss_conf 95668886999899999999973881579999889883999999998566999999999851655553578888842366
Q ss_pred CHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCE
Q ss_conf 30112101468978999999999999875565545310667659999998877776526725788999999997405870
Q gi|254780532|r 144 CPSTYNFPLGTHRSEILNQAMLKQKQVVDEVWEIRDVDHPIKSKEDLVILASIVEKETSRADERAHVASVFINRFSKSIR 223 (325)
Q Consensus 144 ~PdTY~~~~~~s~~~il~~m~~~~~~~~~~~~~~~~~~~~~~s~~evlilASIVEkEa~~~~e~~~IA~V~~NRL~~~M~ 223 (325)
T Consensus 81 fPdTY~~~~~~s~~~il~~m~~~~~~~~~~~~~~~~-~~~~~s~~evltLASIVEkEa~~~~e~~~IA~Vf~NRL~~~M~ 159 (245)
T cd08010 81 FPDTYEFPKGATPEDLLKRMVKRFDKVLEEAWAARA-GLPGLTPYEVLTLASIVEKEAGLPEERPLIAGVFYNRLKKGMR 159 (245)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 076699537899999999999999999999988653-0268999999999999998723731588999999997025996
Q ss_pred EEEEEEEEEECCCCCCCCCCCCCCCHHHCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCEEEC
Q ss_conf 24422210101556677542000000101568301102388899986643279899960878898799998389876652
Q gi|254780532|r 224 LQSDSTVIYGILEGDYDLTNRKISRSDFSIKTPYNSYLMNGLPPTAISNPGRLSLEAVAKPLHTEDLYFVGDGKGGHFFS 303 (325)
Q Consensus 224 Lq~D~Tv~Y~l~~~~~~~~~~~~~~~dl~~~spYNTY~~~GLPP~PI~~pg~~ai~A~l~p~~~dylyfv~~~~g~h~Fs 303 (325)
T Consensus 160 LQ~D~Tv~Y~l~~~~----~~~~~~~dl~~~sPYNTY~~~GLPPgPI~~Pg~~ai~Aal~P~~~~ylYFva~~~G~h~Fs 235 (245)
T cd08010 160 LQSDPTVIYGLGEHK----KGTITKKDLEIDSPYNTYKIKGLPPGPIANPGLAALEAALNPAKTDYLYFVADGTGTHYFS 235 (245)
T ss_pred CCCCCHHHHHCCCCC----CCCCCHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCEEEC
T ss_conf 672806775126787----7767699861579412125169999876787999999986888888489998499827847
Q ss_pred CCHHHHHHHH
Q ss_conf 9999999999
Q gi|254780532|r 304 TNFKDHTINV 313 (325)
Q Consensus 304 ~t~~eH~~nv 313 (325)
T Consensus 236 ~t~~eH~~nV 245 (245)
T cd08010 236 KTYEEHNKNV 245 (245)
T ss_pred CCHHHHHHHC
T ss_conf 8999998629