RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254780532|ref|YP_003064945.1| aminodeoxychorismate lyase
[Candidatus Liberibacter asiaticus str. psy62]
         (325 letters)



>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus
           thermophilus [TaxId: 274]}
          Length = 387

 Score = 28.1 bits (62), Expect = 0.94
 Identities = 8/14 (57%), Positives = 12/14 (85%)

Query: 119 MARRLKDNPLLVGE 132
           + RR K+NP+L+GE
Sbjct: 38  LLRRTKNNPVLIGE 51


>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+
           modules {Escherichia coli [TaxId: 562]}
          Length = 268

 Score = 25.7 bits (56), Expect = 5.2
 Identities = 10/14 (71%), Positives = 12/14 (85%)

Query: 119 MARRLKDNPLLVGE 132
           + RR K+NPLLVGE
Sbjct: 34  LCRRRKNNPLLVGE 47


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.138    0.398 

Gapped
Lambda     K      H
   0.267   0.0556    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,191,737
Number of extensions: 55507
Number of successful extensions: 102
Number of sequences better than 10.0: 1
Number of HSP's gapped: 102
Number of HSP's successfully gapped: 4
Length of query: 325
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 239
Effective length of database: 1,226,816
Effective search space: 293209024
Effective search space used: 293209024
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (24.6 bits)