HHsearch alignment for GI: 254780533 and conserved domain: PRK06840
>PRK06840 hypothetical protein; Validated.
Probab=99.49 E-value=4.4e-13 Score=102.55 Aligned_cols=296 Identities=18% Similarity=0.216 Sum_probs=162.0
Q ss_pred CCC-EEEEEEEEECCCCC-CHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHCCCHHHHHHHC
Q ss_conf 983-89994547718898-9999999998298655307887550048666141515654553457957678989998528
Q gi|254780533|r 1 MRR-VVVTGLGMITPLGC-GVDVSWSRLIAGEVGIRHLDQKFDLEGLSSKIAGLIPVGNGSDGTFNYEDWILSSDLRKID 78 (423)
Q Consensus 1 M~r-VaItG~g~v~p~G~-~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~ag~i~~~~~~~~~f~~~~~i~~~~~~~~d 78 (423)
T Consensus 1 m~~~v~I~~~G~ylP~~~v~n~e~~~~~--~~------~~e~i~~rt----G--I~~Rr-----------~a~----~~e 51 (337)
T PRK06840 1 MKMNVGIVSTGVYLPKDVMTAEEIAKKT--GI------PEEVIIEKF----G--ILEKP-----------IPG----PED 51 (337)
T ss_pred CCCCEEEEEEEEECCCCEECHHHHHHHC--CC------CHHHHHHCC----C--CCEEE-----------ECC----CCC
T ss_conf 9751099999997899736699999873--99------879985465----8--61685-----------789----999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCEEECCCCHHCCCCCCCCC
Q ss_conf 99999999976322100268100268653110244556860000001234554321001210000132101022333332
Q gi|254780533|r 79 QFILYGMVASDMALADSGWAPKTDKDRNSTGVVFGSGMGGLNRIVESSNVLRDGGPRKISPFTVPGSIISLLSGNISIRN 158 (423)
Q Consensus 79 ~~~~l~l~aa~~Al~dAGl~~~~~~~~~r~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 158 (423)
T Consensus 52 ~~~dma~~Aa~~aL~~ag~~~~d-Idl---iI~~~t~~~d~---------------------~-----~ps~A~~vq~~L 101 (337)
T PRK06840 52 HTSDMAIAAAKPALKQAGIDPEA-IDL---VIYIGEEHKDY---------------------P-----VWTAAPKIQHEI 101 (337)
T ss_pred CHHHHHHHHHHHHHHHCCCCHHH-CCE---EEEEECCCCCC---------------------C-----CCHHHHHHHHHH
T ss_conf 89999999999999974989678-878---99993689897---------------------8-----841999999985
Q ss_pred CCC-CCCCCCCCCCCCCCCCCCCCCCCCCCC-CEECCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 110-001133344443223443323313356-021001210112232222343321012456666684220022203467
Q gi|254780533|r 159 QLR-GPNHAVTTACSSGAHAIGDASRLIAFG-DADVMVAGGAEAPICRLGVASFAACRALSTRFNDDPTRASRPFDQDRD 236 (423)
Q Consensus 159 ~l~-Gp~~ti~~aCsSsl~Ai~~A~~~i~~G-~~d~aivGg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rpFd~~~d 236 (423)
T Consensus 102 G~~~a~afDi~~aC~gf~~aL~~A~~~l~a~~~~~~vLvv~~e~~-s~~----------i-------------~~~~~~~ 157 (337)
T PRK06840 102 GAKNAWAFDIMARCGTFPVALKVAKDLMLADPNINNVLLVGGYRN-SDL----------V-------------DYDNPRS 157 (337)
T ss_pred CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC-CCC----------C-------------CCCCCCC
T ss_conf 899960787133201799999999999871655314786014324-655----------5-------------6689885
Q ss_pred C--CCCCCCCEEEECCCCCCCCCCCCCCCCCC-------------CCCCCCC--------CCCC-CCCCCCC--------
Q ss_conf 6--53324404541023454443322333321-------------1001211--------1122-1000121--------
Q gi|254780533|r 237 G--FVMGEGAGALVLEDLEHAKARGAKIYSEI-------------IGYGLSG--------DAFH-ITMPPED-------- 284 (423)
Q Consensus 237 G--~~~gEGa~~lvLe~~~~A~~rg~~i~a~i-------------~G~~~~~--------d~~~-~~~~~~~-------- 284 (423)
T Consensus 158 ~~~f~~GDga~A~ll~~~~~----~~~il~~~~~tdg~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 233 (337)
T PRK06840 158 RFMFNLGAGGSAALLKKNYG----KNRVLGSAIITDGSFSEDVRVPAGGTKQPASYETVDNRQHYLDVLDPESMKERLDP 233 (337)
T ss_pred EEEEEECCCCEEEEEECCCC----CCCEEEEEECCCCCCHHCEEEECCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHH
T ss_conf 16997058834799841688----87057666212575312168713875688874453454215863103888877688
Q ss_pred --CCCHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf --100133210133323222333310210367654432013567764200243411137012212236899999999999
Q gi|254780533|r 285 --GNGAYRCMSSAIARAKLLPSDIDYINAHGTSTIADTIELGAVERLMGDSCYHVSMSSTKSAMGHLLGAAGAVEAAICN 362 (423)
Q Consensus 285 --~~~~~~~i~~aL~~a~i~~~di~~i~~hgtgt~~D~~E~~al~~~f~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~ 362 (423)
T Consensus 234 ~~~~~~~~~i~~~L~~~gl~~~DId~~~~hq~~----~~~~~~~~~~lgi~~~k~-~-~~-~~~GNt~sasiplaL---~ 303 (337)
T PRK06840 234 VSIPNFYKVIREALRKSGYTPKDIDYLAILHMK----RSAHIAVLEGLGLTEEQT-I-YL-EEYGHMGQIDQILSL---H 303 (337)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCC----HHHHHHHHHHHCCCHHHE-E-EC-CCCCCHHHHHHHHHH---H
T ss_conf 999889999999999849995786888885337----999999999829975434-8-60-267731777899999---9
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEE
Q ss_conf 9987083277588878874488650788672478878999445677735899998
Q gi|254780533|r 363 LAIRDGIVPATLNLDNPAKKTFIDLVPHRAIKKNVNVAMSNSFGFGGTNVSLVFR 417 (423)
Q Consensus 363 l~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~al~~s~G~gG~n~~~il~ 417 (423)
T Consensus 304 ~a~~~g~l------------------------~~Gd~vll~g~G~G~s~g~~v~~ 334 (337)
T PRK06840 304 LALEQGKL------------------------KDGDLVVLVSAGTGYTWAATVIR 334 (337)
T ss_pred HHHHCCCC------------------------CCCCEEEEEEEEHHHHHEEEEEE
T ss_conf 99980999------------------------99599999999945212589999